BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045063
(175 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255561086|ref|XP_002521555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539233|gb|EEF40826.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 418
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/174 (65%), Positives = 131/174 (75%), Gaps = 1/174 (0%)
Query: 2 LSFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
L I NF K C I L RYV+TH +FDE H L SLNSQL S++R +F ATW
Sbjct: 5 LLVIAYRNFLTKNCRKIVK-LCSRYVHTHHLFDEFPHRSLYSLNSQLASFSRLGDFLATW 63
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
ALF MH CL+L AYTFTPVL ACSALP ERGKQVHALMIK GTD P+ KTAL+DMY
Sbjct: 64 ALFYRMHCACLDLDAYTFTPVLSACSALPGAERGKQVHALMIKAGTDLGPIAKTALIDMY 123
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
SKYG LG+SV+AF+E+EF+DVVTWN+LLSSFLRHGL+ +A G+F AM RE VEF
Sbjct: 124 SKYGYLGDSVKAFEEVEFRDVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVEF 177
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F+E+ D+ + NS L S+ R +F M + + +T VL AC+A+
Sbjct: 134 KAFEEVEFRDVVTWNSLLSSFLRHGLSNKALGIFGAMRREGVEFSEFTLCSVLKACAAVK 193
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
A +GKQVH L+ V+ TAL+D YS G + E+++ F + ++ D V N+L+
Sbjct: 194 AFSQGKQVHGLVGLSWAVIWVVLGTALIDFYSTVGYVDEALKVFSSLSWRTDDVICNSLI 253
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ +++ +EAF + + M
Sbjct: 254 AGCVQNKRFEEAFSIMRTM 272
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A T L ACS G Q+H I+ G S+ + L+DMY+K G + + F
Sbjct: 275 NAVALTSALVACSENSVLWNGVQIHCAAIRFGFTSDTQLCNKLIDMYAKCGKILNARSVF 334
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
I KDVV+W +++ ++ RHG EA +F+ M
Sbjct: 335 DGIFRKDVVSWTSMIDAYGRHGNGYEALELFKKM 368
>gi|224094823|ref|XP_002310252.1| predicted protein [Populus trichocarpa]
gi|222853155|gb|EEE90702.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 218 bits (555), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 132/173 (76%), Gaps = 6/173 (3%)
Query: 9 NFPAKTCI---SIADA---LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
NF A+T I S A+A L RYV+T +FDE+ H DL SLNSQL SY+R NF ATW
Sbjct: 19 NFSARTPINGYSEANATIYLQNRYVHTGNLFDELPHRDLYSLNSQLASYSRDGNFLATWD 78
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF +HS L+L AYTFTPVL ACSALP + G+QVHALMIK GTD + KTA+MDMYS
Sbjct: 79 LFSRIHSAFLDLDAYTFTPVLRACSALPDTKCGRQVHALMIKTGTDLGTITKTAVMDMYS 138
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
KYG LGESV+ F+E+EF+DVVTWNAL+SSFLRHGLAKEA GVF+AM RE VE
Sbjct: 139 KYGCLGESVKVFEEMEFRDVVTWNALVSSFLRHGLAKEALGVFRAMRRESVEI 191
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + N+ + S+ R +F M + +T +T VL AC+ +
Sbjct: 148 KVFEEMEFRDVVTWNALVSSFLRHGLAKEALGVFRAMRRESVEITEFTLCSVLKACAFIK 207
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALL 149
A +GKQVH L+I G D V+ TAL+D YS G + E+++ F + KD V N+L+
Sbjct: 208 AFRQGKQVHGLVIVMGRDL-VVLGTALIDFYSNVGYISEAMKVFSCLSCRKDEVLRNSLI 266
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ ++H +EAF V M
Sbjct: 267 AGCVKHRRYEEAFLVMSTM 285
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 44/77 (57%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G Q+H + ++ G + V L+DMY+K G + +S F I K VV+W +++ ++ R
Sbjct: 308 GMQIHCVALRFGFIANTQVCNVLLDMYAKCGRILKSRSIFDGICHKTVVSWTSMIDAYGR 367
Query: 155 HGLAKEAFGVFQAMTRE 171
HG EA +F+ M +E
Sbjct: 368 HGHGDEALKLFKEMGQE 384
>gi|312190416|gb|ADQ43215.1| unknown [Eutrema parvulum]
Length = 527
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/149 (56%), Positives = 106/149 (71%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V+ VF+E+ GDLS+LNSQL SY R + T LF MH +L+++TFTPVLGAC
Sbjct: 30 VHADHVFEELPQGDLSTLNSQLSSYLRRGSPNGTLDLFLKMHRASPDLSSHTFTPVLGAC 89
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L PE G+QVHALM K G ++ + KTAL+DMYSKYG L +SV F+ +E KDVV+WN
Sbjct: 90 ALLSYPEMGRQVHALMFKQGAETGTISKTALIDMYSKYGQLVDSVTVFESVEDKDVVSWN 149
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
ALLS FLR+G KEA G+F AM RE+VE
Sbjct: 150 ALLSGFLRNGKGKEALGLFAAMYREKVEI 178
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + D+ S N+ L + R+ LF M+ + ++ +T V+ C++L
Sbjct: 136 VFESVEDKDVVSWNALLSGFLRNGKGKEALGLFAAMYREKVEISEFTLCSVVKTCASLKI 195
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLS 150
++GKQVHA+++ G D V+ TA++ YS GL+ E+++ + + D V N+L+S
Sbjct: 196 LQQGKQVHAMVVVTGRDL-VVLGTAIISFYSSVGLVTEAMKVYISLNVHTDEVMLNSLIS 254
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+R+ +EAF + M+R+R
Sbjct: 255 GCIRNRNYREAFLL---MSRQR 273
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 5/134 (3%)
Query: 38 HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQ 97
H D LNS + R+RN+ + L L CS GKQ
Sbjct: 243 HTDEVMLNSLISGCIRNRNYREAFLLMSRQRPN-----VRVLVSSLAGCSDNSDMWIGKQ 297
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H ++ G S+ + LMDMY K G + ++ F+ I+ K VV+W +++ ++ +G
Sbjct: 298 IHCAALRNGFVSDTRLCNGLMDMYGKCGRIVQARTLFRAIQSKTVVSWTSMIDAYAVNGD 357
Query: 158 AKEAFGVFQAMTRE 171
+A +F+ M E
Sbjct: 358 GVKALQIFREMCEE 371
>gi|449457630|ref|XP_004146551.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like [Cucumis sativus]
gi|449529896|ref|XP_004171934.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like [Cucumis sativus]
Length = 544
Score = 164 bits (415), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/146 (56%), Positives = 102/146 (69%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ+FDE+ D+ SLNS L SY R W+LF MH + LTA+T T VL ACSAL
Sbjct: 46 HQLFDELPQTDIPSLNSLLTSYVRGCRQSDAWSLFSRMHRSFSPLTAHTLTAVLAACSAL 105
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
P + G+ VH L+IK G S V KTA++DMYSK GLL +SV+ F+E+E +DVV WN+LL
Sbjct: 106 PTSQYGQLVHGLIIKTGAYSGIVTKTAILDMYSKCGLLDDSVKVFEEMEMRDVVAWNSLL 165
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
SSFLR GLA+EA VF+ M RE+VEF
Sbjct: 166 SSFLREGLAEEALNVFEEMKREKVEF 191
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + NS L S+ R +F M + + +T VL AC+AL
Sbjct: 148 KVFEEMEMRDVVAWNSLLSSFLREGLAEEALNVFEEMKREKVEFSEFTLCSVLKACAALE 207
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALL 149
GKQVH +++ D V+ TAL+D YS G + E+V+ + + KD + N+L+
Sbjct: 208 DYRLGKQVHGVVVVMNRDM-LVLGTALVDFYSSVGCISEAVKVYTSLNCRKDDIILNSLI 266
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S +R+ +EAF + M
Sbjct: 267 SGCVRNKRYEEAFSLMSKM 285
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 5/129 (3%)
Query: 44 LNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMI 103
LNS + R++ + ++L M A T L ACS GKQ+H + +
Sbjct: 262 LNSLISGCVRNKRYEEAFSLMSKMRPN-----AIALTSALHACSENSDLWIGKQIHCVSV 316
Query: 104 KGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
+ G S + L+DMY+K G + + F + K+VV+W++++ ++ HG +AF
Sbjct: 317 RHGLTSNTQLCNILLDMYAKCGKVLNARAVFDGMCHKNVVSWSSMIQTYGSHGDGLKAFE 376
Query: 164 VFQAMTRER 172
+F+ M R
Sbjct: 377 LFKIMVEGR 385
>gi|15239977|ref|NP_201451.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171135|sp|Q9FJY9.1|PP448_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g66500, mitochondrial; Flags: Precursor
gi|10177531|dbj|BAB10926.1| unnamed protein product [Arabidopsis thaliana]
gi|332010838|gb|AED98221.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 532
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 118/174 (67%), Gaps = 2/174 (1%)
Query: 4 FIRMTNFPAKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
FIR+ N K+ + + R TH +FDE+ DLSSLNSQL S+ RS N T
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
ALF +H +L+++TFTPVLGACS L PE G+QVHALMIK G ++ + KTAL+DMY
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
SKYG L +SV F+ +E KD+V+WNALLS FLR+G KEA GVF AM RERVE
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + DL S N+ L + R+ +F M+ + ++ +T + V+ C++L
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
++GKQVHA+++ G D V+ TA++ YS GL+ E+++ + + D V N+L+
Sbjct: 200 ILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLI 258
Query: 150 SSFLRHGLAKEAFGVFQAMTRER 172
S +R+ KEAF + M+R+R
Sbjct: 259 SGCIRNRNYKEAFLL---MSRQR 278
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V++ ++ H D LNS + R+RN+ + L + L CS
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPN-----VRVLSSSLAGCSDN 294
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
GKQ+H + ++ G S+ + LMDMY K G + ++ F+ I K VV+W +++
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
++ +G +A +F+ M E
Sbjct: 355 DAYAVNGDGVKALEIFREMCEE 376
>gi|297794357|ref|XP_002865063.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310898|gb|EFH41322.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 532
Score = 159 bits (402), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 118/175 (67%), Gaps = 2/175 (1%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
FIR+ + K+ + + R TH +FDE+ DLSSLNSQL SY RS N T
Sbjct: 9 GFIRLGDVIGKSTNLVLRYVFIRNFVTHADHLFDELPQRDLSSLNSQLSSYLRSGNPNGT 68
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
ALF MH +L+++TFTPVLGAC+ L PE G+QVHALMIK G ++ + KTAL++M
Sbjct: 69 LALFLEMHRASPDLSSHTFTPVLGACALLSYPETGRQVHALMIKQGAETGTISKTALINM 128
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
YSKYG L +SV F+ +E KDVV+WNALLS FLR+G KEA GVF AM RERVE
Sbjct: 129 YSKYGHLVDSVRVFESVEEKDVVSWNALLSGFLRNGKGKEALGVFAAMCRERVEI 183
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%), Gaps = 5/143 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + D+ S N+ L + R+ +F M + ++ +T + V+ C++L
Sbjct: 140 RVFESVEEKDVVSWNALLSGFLRNGKGKEALGVFAAMCRERVEISEFTLSSVVKTCASLK 199
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
++GKQVHA+++ G D V+ TAL+ YS GL+ E+++ + + D V N+L+
Sbjct: 200 ILQQGKQVHAMVMVTGRDL-VVLGTALISFYSSVGLISEAMKVYISLNVHTDEVMLNSLI 258
Query: 150 SSFLRHGLAKEAFGVFQAMTRER 172
S +R+ KEAF + M+R+R
Sbjct: 259 SGCIRNRNYKEAFLL---MSRKR 278
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 5/134 (3%)
Query: 38 HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQ 97
H D LNS + R+RN+ + L + L CS GKQ
Sbjct: 248 HTDEVMLNSLISGCIRNRNYKEAFLLMSRKRPN-----VRVLSSCLAGCSDNSDLWIGKQ 302
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H + ++ G S+ + LMDMY K G + ++ F+ I K VV+W +++ ++ +G
Sbjct: 303 IHCVALRNGFVSDIKLCNGLMDMYGKCGQIVQARTLFRAISSKSVVSWTSMIDAYAVNGD 362
Query: 158 AKEAFGVFQAMTRE 171
+A +F+ M E
Sbjct: 363 GVKALEIFREMCEE 376
>gi|78499702|gb|ABB45856.1| hypothetical protein [Eutrema halophilum]
Length = 527
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 117/172 (68%), Gaps = 2/172 (1%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
R+ +F K+ + +P R + H +FDE+S DLS LNSQL S+ R N T AL
Sbjct: 7 RLGDFAGKSTNLLNRFVPVRNLVAHADHLFDELSQRDLSLLNSQLSSHLRCGNPNGTLAL 66
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F MH +L+++TFTPVLGAC+ L +P+ G+QVHALMIK G ++ + KTAL+DMYSK
Sbjct: 67 FLKMHRASPDLSSHTFTPVLGACALLSSPKTGRQVHALMIKQGAETGTISKTALIDMYSK 126
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
YG L +SV F+ +E KDVV+WN+LLS FLR+G KEA GVF AM RE +E
Sbjct: 127 YGHLVDSVTVFESVEDKDVVSWNSLLSGFLRNGKGKEALGVFAAMYRETIEI 178
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 5/142 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + D+ S NS L + R+ +F M+ + ++ +T V+ C++L
Sbjct: 136 VFESVEDKDVVSWNSLLSGFLRNGKGKEALGVFAAMYRETIEISEFTLCSVVKTCASLKI 195
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
++GKQVHA+++ G D V+ TA++ YS GL+ E+++ + + + D V N+L+S
Sbjct: 196 LQQGKQVHAMVVVTGRDL-VVLGTAIISFYSSVGLMSEAMKVYISLNYHTDEVMLNSLIS 254
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+R+ KEAF + M R+R
Sbjct: 255 GCIRNRKYKEAFLL---MRRQR 273
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 38 HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQ 97
H D LNS + R+R + F M N+ L CS GKQ
Sbjct: 243 HTDEVMLNSLISGCIRNRKYKEA---FLLMRRQRPNVR--VLISSLAGCSDNSDLWIGKQ 297
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H + ++ G S+ + LMDMY K G + ++ F + K VV+W +++ ++ +G
Sbjct: 298 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQACTMFSAMPSKSVVSWTSMIGAYAVNGD 357
Query: 158 AKEAFGVFQAMTRERVE 174
+A +F+ M +E E
Sbjct: 358 GVKAIEIFREMCKEGSE 374
>gi|225439791|ref|XP_002273763.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like, partial [Vitis vinifera]
Length = 498
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FDE+ H DL +LNS + S+ RS N A ++F +H +L +YT TPVL A+ P
Sbjct: 1 FDEMPHRDLYTLNSLIASHVRSGNAVAALSVFRRIHRAGSHLNSYTLTPVL----AVLDP 56
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GKQVHAL IK G+D+ V KTALMDMYSKYG LG SV F+E+ FKDVVTWN +LSSF
Sbjct: 57 ICGKQVHALAIKTGSDTPTVTKTALMDMYSKYGQLGSSVRVFEEVGFKDVVTWNTMLSSF 116
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+RHG +EA VF+ M +E V
Sbjct: 117 VRHGRPEEALAVFREMQKEGV 137
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + N+ L S+ R A+F M + L+ +T +L AC+ L
Sbjct: 96 RVFEEVGFKDVVTWNTMLSSFVRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKACTLLK 155
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALL 149
A ++GKQVHAL++ G D V+ TAL+D Y+ +GE++E F + + KD V N+L+
Sbjct: 156 AFQQGKQVHALVVVMGRDL-VVLGTALIDFYTNVECIGEAMEIFHNLNWKKDDVMRNSLI 214
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S +R+ KEAF + AM
Sbjct: 215 SGCVRNRRYKEAFLIMSAM 233
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + R+R + + + M + +T+ L ACS GKQ+H + ++
Sbjct: 211 NSLISGCVRNRRYKEAFLIMSAMRPNVVAVTS-----ALAACSKNSDLWVGKQIHCVAMR 265
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + + L+DMY+K G + + F ++ KDVV+W +++ ++ HG EA +
Sbjct: 266 FGFTFDTQLCNVLLDMYAKCGKILNARSLFDRMDKKDVVSWTSMIDAYGNHGHGLEALKL 325
Query: 165 FQAMTRE 171
F+ M E
Sbjct: 326 FKKMEGE 332
>gi|357448257|ref|XP_003594404.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483452|gb|AES64655.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 516
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 92/158 (58%), Gaps = 6/158 (3%)
Query: 19 ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYT 78
A A P ++ ++ H +S LNS + SY R + + + LF + ++L ++T
Sbjct: 5 AVAQPLSSFHSQSDHHQLLHRPISELNSLITSYIRRGHPISAFNLFLSLRRIRIDLDSHT 64
Query: 79 FTPVLGACSALPAPER-GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
FTP+L P+P GKQ+H+ MIK G+DS V KTAL+DMYS++G L S++ F E+
Sbjct: 65 FTPLL-----RPSPTSLGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLNSSLKVFDEM 119
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+DVV WN LLS FLR G EA V + M RE VE
Sbjct: 120 LHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEM 157
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 74/136 (54%), Gaps = 2/136 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ H D+ + N+ L + R + M + ++ +T VL C++L
Sbjct: 114 KVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCASLK 173
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALL 149
A E G+QVH L++ G D V+ TAL+D YS G + ++ F ++ +KD + N+L+
Sbjct: 174 ALEFGRQVHGLVVAMGRDL-VVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNSLV 232
Query: 150 SSFLRHGLAKEAFGVF 165
S +++G +EAF V
Sbjct: 233 SGCIKNGRYREAFKVM 248
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A T VL CS GKQVH + ++ G E + L+DMY+K G + ++ F
Sbjct: 254 NAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFETQLCNVLLDMYAKCGKILQAWSVF 313
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I KDV++W ++ + R+G EA +F M + E
Sbjct: 314 DGIFQKDVISWTCMIDGYGRNGCGYEAVELFWKMMEDGSE 353
>gi|356541437|ref|XP_003539183.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like [Glycine max]
Length = 547
Score = 108 bits (271), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 82/141 (58%), Gaps = 6/141 (4%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTAYTFTPVLGACSALPAPER- 94
D+S NS + SY R + + LF + HS + AYTFT +L A S L +
Sbjct: 47 DISQTNSLIASYVRRGDPVSALTLFHSLRRRAHSDVV-ADAYTFTSILRASSLLRVSGQF 105
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G QVHA M+K G DS V KTAL+DMYSK G L E+ + F E+ +DVV WNALLS FLR
Sbjct: 106 GTQVHAQMLKTGADSGTVAKTALLDMYSKCGSLDEATKVFDEMRHRDVVAWNALLSCFLR 165
Query: 155 HGLAKEAFGVFQAMTRERVEF 175
EAFGV + M RE VE
Sbjct: 166 CDRPVEAFGVLREMGRENVEL 186
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 75/137 (54%), Gaps = 3/137 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ H D+ + N+ L + R + + M + L+ +T L +C++L
Sbjct: 143 KVFDEMRHRDVVAWNALLSCFLRCDRPVEAFGVLREMGRENVELSEFTLCSALKSCASLK 202
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVTWNAL 148
A E G+QVH L++ G D V+ TAL+D Y+ G + ++++ F ++ +KD + +N++
Sbjct: 203 ALELGRQVHGLVVCMGRDL-VVLSTALVDFYTSVGCVDDALKVFYSLKGCWKDDMMYNSM 261
Query: 149 LSSFLRHGLAKEAFGVF 165
+S +R EAF V
Sbjct: 262 VSGCVRSRRYDEAFRVM 278
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + RSR + + + ++ A T L CS GKQ+H + ++
Sbjct: 259 NSMVSGCVRSRRYDEAFRVMGFVRPN-----AIALTSALVGCSENLDLWAGKQIHCVAVR 313
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + + AL+DMY+K G + +++ F I KDV++W ++ ++ R+G +EA V
Sbjct: 314 WGFTFDTQLCNALLDMYAKCGRISQALSVFDGICEKDVISWTCMIDAYGRNGQGREAVEV 373
Query: 165 FQAM 168
F+ M
Sbjct: 374 FREM 377
>gi|356573514|ref|XP_003554903.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66500,
mitochondrial-like [Glycine max]
Length = 530
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/140 (47%), Positives = 81/140 (57%), Gaps = 6/140 (4%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTAYTFTPVLGACSALPAPER-G 95
+S NS + SY R + + LF + HS + AYTFT +L A S L + G
Sbjct: 31 ISQTNSLIASYVRRGDPVSALTLFHSLRRRAHSDVV-ADAYTFTSILRASSLLRVSGQFG 89
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
QVHA M+K G DS V KTAL+DMYSK G L E+ + F E+ +DVV WNALLS FLR
Sbjct: 90 TQVHAQMLKTGADSGTVAKTALLDMYSKCGSLDEATKVFDEMRHRDVVAWNALLSCFLRC 149
Query: 156 GLAKEAFGVFQAMTRERVEF 175
L EA GV + M RE VE
Sbjct: 150 DLPVEAVGVLREMGRENVEL 169
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ H D+ + N+ L + R + M + L+ +T L +C+ L
Sbjct: 126 KVFDEMRHRDVVAWNALLSCFLRCDLPVEAVGVLREMGRENVELSEFTLCSALKSCALLK 185
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVTWNAL 148
A E G+QVH L++ G D V+ TAL+D Y+ G + ++++ F ++ +KD + +N++
Sbjct: 186 ALELGRQVHGLVVCMGRDL-VVLSTALVDFYTSVGCVDDALKVFYSLKGCWKDDMMYNSM 244
Query: 149 LSSFLRHGLAKEAFGVF 165
+S +R EAF V
Sbjct: 245 VSGCVRSRRYDEAFRVM 261
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 5/124 (4%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + RSR + + + ++ A T L CS GKQ+H + +
Sbjct: 242 NSMVSGCVRSRRYDEAFRVMGFVRPN-----AVALTSALVGCSENLDLWAGKQIHCVAFR 296
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
+ + AL+DMY+K G + +++ F I KDV++W ++ ++ R+G +EA V
Sbjct: 297 WAFTFDTQLCNALLDMYAKCGRISQALSVFHGICEKDVISWTCMIDAYGRNGQGREAVEV 356
Query: 165 FQAM 168
F+ M
Sbjct: 357 FREM 360
>gi|297741507|emb|CBI32639.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 50/79 (63%), Positives = 59/79 (74%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G VHAL IK G+D+ V KTALMDMYSKYG LG SV F+E+ FKDVVTWN +LSSF+R
Sbjct: 20 GNAVHALAIKTGSDTPTVTKTALMDMYSKYGQLGSSVRVFEEVGFKDVVTWNTMLSSFVR 79
Query: 155 HGLAKEAFGVFQAMTRERV 173
HG +EA VF+ M +E V
Sbjct: 80 HGRPEEALAVFREMQKEGV 98
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + N+ L S+ R A+F M + L+ +T +L AC+ L
Sbjct: 57 RVFEEVGFKDVVTWNTMLSSFVRHGRPEEALAVFREMQKEGVWLSEFTLCSLLKACTLLK 116
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALL 149
A ++GKQVHAL++ G D V+ TAL+D Y+ +GE++E F + + KD V N+L+
Sbjct: 117 AFQQGKQVHALVVVMGRDL-VVLGTALIDFYTNVECIGEAMEIFHNLNWKKDDVMRNSLI 175
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S +R+ KEAF + AM
Sbjct: 176 SGCVRNRRYKEAFLIMSAM 194
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 5/127 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + R+R + + + M + +T+ L ACS GKQ+H + ++
Sbjct: 172 NSLISGCVRNRRYKEAFLIMSAMRPNVVAVTS-----ALAACSKNSDLWVGKQIHCVAMR 226
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + + L+DMY+K G + + F ++ KDVV+W +++ ++ HG EA +
Sbjct: 227 FGFTFDTQLCNVLLDMYAKCGKILNARSLFDRMDKKDVVSWTSMIDAYGNHGHGLEALKL 286
Query: 165 FQAMTRE 171
F+ M E
Sbjct: 287 FKKMEGE 293
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 17 SIADALPKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
+IADA K +VFD + D+ S + + +Y++S A FC M
Sbjct: 466 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 525
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ VL +C++L E G+QVH L+ K G D+E +++AL+DMY+K G + E+ + F
Sbjct: 526 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 585
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+I D+V+W A++S + +HGL ++A +F+ M
Sbjct: 586 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRM 619
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ ++ S + T F + FC M ++ + + ++ ++ +C L +
Sbjct: 177 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 236
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GK VHA ++ G + V T+L++MY+K G + +S F + + V+WNA++S
Sbjct: 237 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 296
Query: 152 FLRHGLAKEAFGVFQAM 168
+GL EAF +F M
Sbjct: 297 CTSNGLHLEAFDLFVRM 313
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 15 CISIADALPKRYVYTHQVFDE--ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
C S+ DA VFD I+ G + N+ + Y++S L+ M +
Sbjct: 370 CGSLHDA--------RSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 421
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESV 131
YT+ V A +A + + G+ VH +++K G D V V A+ D YSK G L +
Sbjct: 422 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVR 481
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F +E +D+V+W L++++ + L +EA F M E
Sbjct: 482 KVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREE 521
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ VF+ ++ + S N+ + T + + LF M + YT V A
Sbjct: 275 SYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGK 334
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE--IEFKDVVTWN 146
L GK+V + G + +V TAL+DMYSK G L ++ F I WN
Sbjct: 335 LVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWN 394
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
A++S + + G ++EA ++ M + +
Sbjct: 395 AMISGYSQSGCSQEALELYVQMCQNGI 421
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+IS+ D+ S + + Y + LF M + + A T VL ACS
Sbjct: 583 KVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGG 642
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E G M G G E ++D+ + G L +++E +++ + + + W L
Sbjct: 643 MVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTL 702
Query: 149 LSSFLRHG 156
L HG
Sbjct: 703 LGGCRVHG 710
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 89/154 (57%), Gaps = 2/154 (1%)
Query: 17 SIADALPKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
+IADA K +VFD + D+ S + + +Y++S A FC M
Sbjct: 412 AIADAYSKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAP 471
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ VL +C++L E G+QVH L+ K G D+E +++AL+DMY+K G + E+ + F
Sbjct: 472 NQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVF 531
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+I D+V+W A++S + +HGL ++A +F+ M
Sbjct: 532 DKISNPDIVSWTAIISGYAQHGLVEDALQLFRRM 565
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ ++ S + T F + FC M ++ + + ++ ++ +C L +
Sbjct: 123 VFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDS 182
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GK VHA ++ G + V T+L++MY+K G + +S F + + V+WNA++S
Sbjct: 183 LELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISG 242
Query: 152 FLRHGLAKEAFGVFQAM 168
+GL EAF +F M
Sbjct: 243 CTSNGLHLEAFDLFVRM 259
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 15 CISIADALPKRYVYTHQVFDE--ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
C S+ DA VFD I+ G + N+ + Y++S L+ M +
Sbjct: 316 CGSLHDA--------RSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGI 367
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESV 131
YT+ V A +A + + G+ VH +++K G D V V A+ D YSK G L +
Sbjct: 368 TSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVR 427
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F +E +D+V+W L++++ + L +EA F M E
Sbjct: 428 KVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREE 467
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 66/147 (44%), Gaps = 2/147 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ VF+ ++ + S N+ + T + + LF M + YT V A
Sbjct: 221 SYWVFNMMTEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGK 280
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE--IEFKDVVTWN 146
L GK+V + G + +V TAL+DMYSK G L ++ F I WN
Sbjct: 281 LVDVNMGKEVQNCASELGIEGNVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTPWN 340
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
A++S + + G ++EA ++ M + +
Sbjct: 341 AMISGYSQSGCSQEALELYVQMCQNGI 367
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+IS+ D+ S + + Y + LF M + + A T VL ACS
Sbjct: 529 KVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGG 588
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E G M G G E ++D+ + G L +++E +++ + + + W L
Sbjct: 589 MVEEGLFYFQQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTL 648
Query: 149 LSSFLRHG 156
L HG
Sbjct: 649 LGGCRVHG 656
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 80/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+S ++ S N + Y +S + + L M T +L AC AL
Sbjct: 473 KVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALS 532
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A ERGK VHA +K G +S+ VV T+L+ MYSK G + E+ F +I +D V WNA+L+
Sbjct: 533 ALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLA 592
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HG+ EA +F+ M +ERV
Sbjct: 593 GYGQHGIGPEAVDLFKRMLKERV 615
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 11/172 (6%)
Query: 13 KTCISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRS-----RNFPATW 61
+T + +A+AL Y + + FD +S D+ S ++ + Y +S + +
Sbjct: 312 ETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVF 371
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L M + TF +L ACS A E+G+Q+HA + K G +S+ ++TA+ +MY
Sbjct: 372 QLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMY 431
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+K G + E+ + F ++E K+VV W +LL+ +++ G A VF M+ V
Sbjct: 432 AKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNV 483
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 75/140 (53%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
QVF ++ D+ + +S + +Y + + + F M + TF +L AC+
Sbjct: 132 VEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNN 191
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E+ +++H ++ G +++ V TAL+ MYSK G + + E F++++ ++VV+W A+
Sbjct: 192 YSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAI 251
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ + +H EAF +++ M
Sbjct: 252 IQANAQHRKLNEAFELYEKM 271
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 79/146 (54%), Gaps = 2/146 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F ++ ++ S + + + + R + L+ M ++ A TF +L +C+
Sbjct: 235 EIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPE 294
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A RG+++H+ + + G +++ VV AL+ MY K + ++ E F + +DV++W+A+++
Sbjct: 295 ALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIA 354
Query: 151 SFLRHGLA-KEAFG-VFQAMTRERVE 174
+ + G KE+ VFQ + R R E
Sbjct: 355 GYAQSGYQDKESLDEVFQLLERMRRE 380
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 56/103 (54%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
L + + T+ ++ C+ L E GK VH + + G + + +L++ YSK+G +
Sbjct: 74 LLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVE 133
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ + +DVVTW+++++++ + +AF F+ M +E
Sbjct: 134 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIE 176
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD+IS+ D + N+ L Y + P LF M + TFT V+ AC
Sbjct: 575 VFDKISNRDTVAWNAMLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGL 634
Query: 92 PERGKQVHALM-----IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
+ G+++ +M +K G ++D+ + G L E+ E + + + D+ W
Sbjct: 635 VQEGREIFRIMQEDFRMKPGKQH----YGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVW 690
Query: 146 NALLSSFLRH 155
+ALL + H
Sbjct: 691 HALLGACKSH 700
>gi|168004577|ref|XP_001754988.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694092|gb|EDQ80442.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 437
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA QVFD + D+ + L Y R + + ++ M L L
Sbjct: 23 CGSITDA--------RQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVYEQMLEERLPL 74
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TFT +L C++L + E+GK+VH MIK G S+ ++ L+DMY+K G + + F
Sbjct: 75 DGVTFTTILSVCASLRSLEKGKKVHCDMIKAGIHSDRILGNTLIDMYAKCGNIRQGHTMF 134
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E++ +DVVTWN +++ R+G EAF +F+AM
Sbjct: 135 TEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAM 168
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S+ DAL Q+F+++ +L + S + +Y ++ W + M +
Sbjct: 221 NCRSLEDAL--------QIFEKLPERNLVTWTSVIAAYAQAGIPEKAWIFYEKMLKEGIV 272
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ +T VL C+ + E+GKQVH M+K G ++ ++ + L+DMY+K G + +
Sbjct: 273 ADKFAYTTVLHVCATMGDLEKGKQVHDHMVKSGIATDQILDSTLIDMYAKCGRTDIAHQL 332
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ ++ +DVV++ AL+ +R G +EA F +M R+ V
Sbjct: 333 LEIMDERDVVSYTALIVGHVRQGRFQEALQTFSSMQRDGV 372
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 82/144 (56%), Gaps = 3/144 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +F E+ D+ + N + R+ F + LF M L T+ VL CS+L
Sbjct: 131 HTMFTEMKDRDVVTWNIIIAGAARNGYFDEAFELFEAMREAGLKPDKVTYVCVLNVCSSL 190
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E+G+ +H+ +I+ G + + V TAL++MYS L ++++ F+++ +++VTW +++
Sbjct: 191 ---EQGRILHSYIIEAGLELDLWVGTALLNMYSNCRSLEDALQIFEKLPERNLVTWTSVI 247
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+++ + G+ ++A+ ++ M +E +
Sbjct: 248 AAYAQAGIPEKAWIFYEKMLKEGI 271
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ+ + + D+ S + + + R F F M + TF VL AC+ L
Sbjct: 330 HQLLEIMDERDVVSYTALIVGHVRQGRFQEALQTFSSMQRDGVLPNTVTFVGVLKACTGL 389
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
+ G+++HA +IK G + +K AL DMY+K
Sbjct: 390 GSLVEGRRIHASIIKAGLAQDSSLKYALADMYAK 423
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
V AL++MY K G + ++ + F + +D+ TW +L+ + R G +EA+ V++ M ER
Sbjct: 12 VLNALLNMYMKCGSITDARQVFDNMRERDMFTWTMMLTGYARLGHLEEAYRVYEQMLEER 71
Query: 173 V 173
+
Sbjct: 72 L 72
>gi|449499688|ref|XP_004160887.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g25270, chloroplastic-like [Cucumis sativus]
Length = 489
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Query: 29 THQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
HQVFDE+ + + S+ NS + Y + AL+ M + +TF VL AC
Sbjct: 108 AHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKAC 167
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + G+ VH +++ G + V AL+DMYSK G + + + F +IE+KD+V+WN
Sbjct: 168 GGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWN 227
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++L+ + RHGL EA +F M +E E
Sbjct: 228 SMLTGYTRHGLHFEALDIFDQMIQEGYE 255
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD+I + D+ S NS L YTR +F M + + +L
Sbjct: 209 VRARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSNI 268
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S++ +H +I+ G + + +L+ MY+K G L + F+++ KD+V+WN
Sbjct: 269 SSMKFK---LHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWN 325
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+++S+ H + EA F+ M
Sbjct: 326 SIISA---HFNSAEALTYFEVM 344
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 78/135 (57%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ + N+ + SYT S ++ LF M S LN + T VL AC LP+ E+GK VH
Sbjct: 455 DVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVH 514
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ +GG + + TAL+DMY+K G L +S E F ++ KDV++WN ++S + HG A
Sbjct: 515 QYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMISGYGLHGDAN 574
Query: 160 EAFGVFQAMTRERVE 174
A VFQ M + V+
Sbjct: 575 SAMEVFQQMEQSNVK 589
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 3/145 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN---LTAYTFTPVLGACSA 88
+FDEI D+ S + + Y + + C M + + + T AC
Sbjct: 188 MFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGN 247
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A G+ +H L +K G VV+++L+ MYSK G + E+ +F ++ KDV +W ++
Sbjct: 248 LGAMIAGRCLHGLAVKTGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSV 307
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+ R G E +F M + V
Sbjct: 308 IGVCARFGFMNECLNLFWDMQVDDV 332
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 10 FPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
F + IS+ + K + T+ VFD + D NS + S+ + N+ + + M
Sbjct: 65 FISSKLISLYASFRKPHSSTY-VFDSTNQKDTFLWNSIIKSHFSNGNYFKAFDFYIQMRY 123
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE-PVVKTALMDMYSKYGLLG 128
+T ++ C+ L E GK +H L+ K G +E V ++ + MY+K G++
Sbjct: 124 DNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVME 183
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ F EI +DVV+W AL+ ++ + +++ M R
Sbjct: 184 DASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGLECLCEMRR 225
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VH +IK D + + +L+DMY K G L + + F + +DVVTWN L+SS+ G
Sbjct: 413 VHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQ-RDVVTWNTLISSYTHSGH 471
Query: 158 AKEAFGVFQAMTRERVE 174
EA +F M E++
Sbjct: 472 YAEAITLFDEMISEKLN 488
>gi|449460860|ref|XP_004148162.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Cucumis sativus]
Length = 489
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Query: 29 THQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
HQVFDE+ + + S+ NS + Y + AL+ M + +TF VL AC
Sbjct: 108 AHQVFDEMGNRNFSAFAWNSLISGYAELGLYEDALALYFQMEEEGVEPDNFTFPRVLKAC 167
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + G+ VH +++ G + V AL+DMYSK G + + + F +IE+KD+V+WN
Sbjct: 168 GGIGSIQIGEAVHRHVVRSGFAGDVFVLNALVDMYSKCGCIVRARKVFDQIEYKDIVSWN 227
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++L+ + RHGL EA +F M +E E
Sbjct: 228 SMLTGYTRHGLHFEALDIFDQMIQEGYE 255
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 68/142 (47%), Gaps = 6/142 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD+I + D+ S NS L YTR +F M + + +L
Sbjct: 209 VRARKVFDQIEYKDIVSWNSMLTGYTRHGLHFEALDIFDQMIQEGYEPDSVALSTLLSNI 268
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S++ +H +I+ G + + +L+ MY+K G L + F+++ KD+V+WN
Sbjct: 269 SSMKFK---LHIHGWVIRHGVEWNLSIANSLIVMYAKCGKLNRAKWLFQQMPQKDMVSWN 325
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+++S+ H + EA F+ M
Sbjct: 326 SIISA---HFNSAEALTYFEVM 344
>gi|302809659|ref|XP_002986522.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
gi|300145705|gb|EFJ12379.1| hypothetical protein SELMODRAFT_124407 [Selaginella moellendorffii]
Length = 625
Score = 97.1 bits (240), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD I + DL S NS + +Y++ + LF M + + T+ +LGACSA+
Sbjct: 63 KVFDSIENKDLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGACSAME 119
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK+VHA + + S+P + AL++MYSK G+L + F I+ D WNA++S
Sbjct: 120 LLELGKEVHARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMIS 179
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++HG A+EA G+F+ M E V
Sbjct: 180 GLVQHGRAREALGLFERMKAESVRI 204
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD ++ ++ S NS + +Y +S L+ M + T+ LGAC++
Sbjct: 262 KMFDGMNEKTNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSY 321
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+G ++H+ + + ++ + TA+++MY+K G L ++ F+++ K+ VTW+A++
Sbjct: 322 GGSAKGAEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMV 381
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+F++ G +EA ++ M E
Sbjct: 382 GAFIQQGYDREALDLYLRMVSE 403
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD I D S N+ + + LF M + + + ++ +L AC AL
Sbjct: 161 RVFDGIQSVDPSPWNAMISGLVQHGRAREALGLFERMKAESVRIDKVSYLTILSACCALE 220
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
G ++H G D + VV+TA+ +MYSK + + + F + K +VV+WN+++
Sbjct: 221 DLHEGIRIHEHASACGMDKDLVVETAVFNMYSKCRQVDLARKMFDGMNEKTNVVSWNSMI 280
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + G +EA +++ M E V+
Sbjct: 281 AAYAQSGRGREALELYELMKEEGVQ 305
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF+ V +CS E + A + S VVK +L+ Y++ G L + + F I
Sbjct: 12 TFSGVASSCSG---REELDTIQASIAASDFHSNVVVKNSLVSAYTRSGDLRSARKVFDSI 68
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E KD+++WN+++ ++ +HG +E +F+ M E
Sbjct: 69 ENKDLISWNSMVVAYSQHGHGEEMLELFRKMDVE 102
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMY 121
L+ M S + T L ACS + A + GK +H+ + T + ++ +L++MY
Sbjct: 396 LYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMY 455
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+K G L + F ++ +D +WN ++ HG E + M ++ V+
Sbjct: 456 AKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVD 508
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 95.5 bits (236), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTCLNLTAYTFTPVLGACSAL 89
+VFD++ + D+ S N + Y ++ T F Y M + L ++F +L ACS+
Sbjct: 744 KVFDKMPNRDIMSWNKMIAGYAQN-GLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSF 802
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E GK+VHA ++K + V AL+ MY+K G L E+ E F K+VVTWNA++
Sbjct: 803 SALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMI 862
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+++ +HGLA +A F M +E ++
Sbjct: 863 NAYAQHGLASKALDFFNCMDKEGIK 887
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 8/159 (5%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
+ C SI +A VF+ D+ S NS + + + ++ A + LF M L
Sbjct: 532 RRCGSIMEA--------QNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGL 583
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
TF VL C A E G+Q+H L+I+ G + + AL++MY + G L ++ E
Sbjct: 584 EPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYE 643
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + ++V++W A++ F G ++AF +F M +
Sbjct: 644 VFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQND 682
Score = 75.9 bits (185), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ + DL S N+ + Y R + L+ M S + TF +L AC+
Sbjct: 441 ELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSS 500
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK +H +++ G S + ALM+MY + G + E+ F+ +D+++WN++++
Sbjct: 501 AYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIA 560
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+HG + A+ +F M +E +E
Sbjct: 561 GHAQHGSYEAAYKLFLEMKKEGLE 584
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S++DA HQVF ++ D+ S NS + Y + + LF M +
Sbjct: 130 CRSVSDA--------HQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIP 181
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T+ +L AC + E GK++H+ +I+ G +P V+ +L++MY K L + + F
Sbjct: 182 SKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVF 241
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I +DVV++N +L + + +E G+F M+ E +
Sbjct: 242 SGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGI 280
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF I D+ S N+ L Y + LF M S + T+ +L A +
Sbjct: 239 QVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPS 298
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK++H L + G +S+ V TAL M+ + G + + +A + +DVV +NAL++
Sbjct: 299 MLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIA 358
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HG +EAF + M + V
Sbjct: 359 ALAQHGHYEEAFEQYYQMRSDGV 381
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 78/164 (47%), Gaps = 6/164 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+++ +AL Y+ ++VF + H ++ S + + + + LF M +
Sbjct: 622 VNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQN 681
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
TF+ +L AC + + GK+V A ++ G + + V AL+ YSK G + +
Sbjct: 682 DGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTD 741
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + F ++ +D+++WN +++ + ++GL A M + V
Sbjct: 742 ARKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGV 785
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 72/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q + + D+ N+ + + + ++ + + M S + + T+ VL ACS
Sbjct: 340 QALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSK 399
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+ +H+ + + G S+ + +L+ MY++ G L + E F + +D+++WNA+++
Sbjct: 400 ALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIA 459
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R EA +++ M E V+
Sbjct: 460 GYARREDRGEAMKLYKQMQSEGVK 483
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 52/90 (57%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ ++ C+ + K++HA M++ G + + L++MY K + ++ + F ++
Sbjct: 85 YVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMP 144
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DV++WN+L+S + + G K+AF +F+ M
Sbjct: 145 RRDVISWNSLISCYAQQGFKKKAFQLFEEM 174
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTCLNLTAYTFTPVLGACSAL 89
+VFD++ D+ S N + Y ++ T F Y M + ++F +L ACS+
Sbjct: 689 EVFDKMPSRDIVSWNKIIAGYAQN-GLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSF 747
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E GK+VHA ++K + V AL+ MY+K G GE+ E F I K+VVTWNA++
Sbjct: 748 SALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMI 807
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+++ +HGLA +A G F M +E ++
Sbjct: 808 NAYAQHGLASKALGFFNCMEKEGIK 832
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA HQVF E+ D+ S NS + Y + + LF M +
Sbjct: 75 CRSVLDA--------HQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP 126
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T+ +L AC + E GK++H+ +IK G +P V+ +L+ MY K G L + + F
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF 186
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I +DVV++N +L + + KE G+F M+ E +
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI 225
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
LPK ++F + DL S N+ + Y R + L+ M S + TF
Sbjct: 381 LPK----ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L AC+ A GK +H +++ G S + ALM+MY + G L E+ F+ + +D
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V++WN++++ +HG + A+ +FQ M E +E
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 73/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF IS D+ S N+ L Y + LF M S ++ T+ +L A +
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK++H L ++ G +S+ V TAL+ M + G + + +AFK +DVV +NAL++
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIA 303
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HG EAF + M + V
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGV 326
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VF+ D+ S NS + + + ++ + LF M + L TF VL C
Sbjct: 486 QNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNP 545
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E GKQ+H + + G + + AL++MY + G L ++ F ++ +DV++W A++
Sbjct: 546 EALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMI 605
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
G +A +F M E
Sbjct: 606 GGCADQGEDMKAIELFWQMQNE 627
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 81/172 (47%), Gaps = 5/172 (2%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
S IR+ C+ D + Q F + D+ N+ + + + + +
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAK-----QAFKGTADRDVVVYNALIAALAQHGHNVEAFE 316
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+ M S + L T+ +L ACS A E GK +H+ + + G S+ + AL+ MY+
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ G L ++ E F + +D+++WNA+++ + R EA +++ M E V+
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 6 RMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPA 59
R+T + +++ +AL Y+ VF + H D+ S + +
Sbjct: 557 RITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMK 616
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
LF M + TF+ +L C++ + GK+V A ++ G + + V AL+
Sbjct: 617 AIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALIS 676
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
YSK G + ++ E F ++ +D+V+WN +++ + ++GL + A M + V
Sbjct: 677 AYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDV 730
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ +L C+ K++HA M++ + + L++MY K + ++ + FKE+
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DV++WN+L+S + + G K+AF +F+ M
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEM 119
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI++A+ Y +VF+ + DL S S + +Y++ + +F M +
Sbjct: 411 VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +TF+ VL +C+ L E G+QVH ++ K G D + +++AL+DMY+K G LG+
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F I D V+W A+++ +HG+ +A +F+ M + VE
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVE 575
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++S + S + + F + FC M S + + ++ +L C L
Sbjct: 126 RLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLD 185
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G VHA ++ G S V TAL++MY+K + +S + F + +VV+WNA+++
Sbjct: 186 SIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMIT 245
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
F + L +AF +F M E V
Sbjct: 246 GFTSNDLYLDAFDLFLRMMGEGV 268
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+++VF+ ++ ++ S N+ + +T + + + LF M + A TF V A
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGM 284
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE--IEFKDVVTWN 146
L + K+V ++ G DS +V TAL+DM SK G L E+ F I + WN
Sbjct: 285 LRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWN 344
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
A++S +LR G ++A +F M + +
Sbjct: 345 AMISGYLRSGFNEKALELFAKMCQNDI 371
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + Y RS LF M + L YT+ V A +AL GK+VHA IK
Sbjct: 344 NAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIK 403
Query: 105 GGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
G + V + A+ + Y+K G L + + F +E +D+++W +L++++ + +A
Sbjct: 404 SGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIE 463
Query: 164 VFQAMTRERV 173
+F M E +
Sbjct: 464 IFSNMRAEGI 473
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ IS+ D S + + + + LF M + A TF VL ACS
Sbjct: 533 KVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGG 592
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E G Q LM K G E ++D+ S+ G L +++E + + + + W L
Sbjct: 593 LVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTL 652
Query: 149 LSSFLRHG 156
L + HG
Sbjct: 653 LGACRVHG 660
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 90/165 (54%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI++A+ Y +VF+ + DL S S + +Y++ + +F M +
Sbjct: 411 VSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRA 470
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +TF+ VL +C+ L E G+QVH ++ K G D + +++AL+DMY+K G LG+
Sbjct: 471 EGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGD 530
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F I D V+W A+++ +HG+ +A +F+ M + VE
Sbjct: 531 AKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVE 575
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++S + S + + F + FC M S + + ++ +L C L
Sbjct: 126 RLFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLD 185
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G VHA ++ G S V TAL++MY+K + +S + F + +VV+WNA+++
Sbjct: 186 SIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMIT 245
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
F + L +AF +F M E V
Sbjct: 246 GFTSNDLYLDAFDLFLRMMGEGV 268
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 2/147 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+++VF+ ++ ++ S N+ + +T + + + LF M + A TF V A
Sbjct: 225 SYKVFNTMTEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGM 284
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE--IEFKDVVTWN 146
L + K+V ++ G DS +V TAL+DM SK G L E+ F I + WN
Sbjct: 285 LRDVNKAKEVSGYALELGVDSNTLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWN 344
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
A++S +LR G ++A +F M + +
Sbjct: 345 AMISGYLRSGFNEKALELFAKMCQNDI 371
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 1/130 (0%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + Y RS LF M + L YT+ V A +AL GK+VHA IK
Sbjct: 344 NAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIK 403
Query: 105 GGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
G + V + A+ + Y+K G L + + F +E +D+++W +L++++ + +A
Sbjct: 404 SGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIE 463
Query: 164 VFQAMTRERV 173
+F M E +
Sbjct: 464 IFSNMRAEGI 473
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ IS+ D S + + + + LF M + A TF VL ACS
Sbjct: 533 KVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGG 592
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E G Q LM K G E ++D+ S+ G L +++E + + + + W L
Sbjct: 593 LVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTL 652
Query: 149 LSSFLRHG 156
L + HG
Sbjct: 653 LGACRVHG 660
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 80/142 (56%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + Y R + LF M + T +T++ VL AC+++ +
Sbjct: 175 IFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGS 234
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHALMIK G V L+DMY+K G + ++ + F + +DVV+WN++L+
Sbjct: 235 LEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTG 294
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ +HGL K A F+ M R R+
Sbjct: 295 YSQHGLGKVALQRFEEMLRTRI 316
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 2/150 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
VY ++FDE+S D+ + + + Y++ L M L +T +L A
Sbjct: 67 VYARKLFDEMSSRDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAA 126
Query: 87 SALPAPE--RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
S + + + +G+Q+H L ++ G DS V A++DMY++ L E+ F + K+ V+
Sbjct: 127 SGVGSTDVLQGRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVS 186
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WNAL++ + R G +AF +F M RE V+
Sbjct: 187 WNALIAGYARKGQGDKAFCLFSNMLRENVK 216
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L C+ L GK +HAL++ + V++ L+++Y+K G L + + F E+ +D
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
VVTW AL++ + +H ++A + M R
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLR 109
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 20 DALPKRYVYT-----------------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
D +P+R +YT +F + D + NS + + +
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
F MH L Y+F VL ACS L +G QVH+L+ K S+ + +AL+DMYS
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G + ++ F E+ ++VV+WN+L++ F ++G A EA VFQ M RVE
Sbjct: 199 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +++ ++ S N+ + YT++ +LFC + + T Y+F +L AC+ L
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 92 PERGKQVHALMIK------GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
G Q H ++K G + + V +L+DMY K G + E F+++ +D V+W
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
NA++ F ++G EA +F+ M
Sbjct: 462 NAMIIGFAQNGYGNEALELFREM 484
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 36/178 (20%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACS 87
+VFDE+ ++ S NS + + +N PA AL F M + + T V+ AC+
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCF--EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 88 ALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGE----------------- 129
+L A + G++VH ++K ++ ++ A +DMY+K + E
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 130 ----------SVEA----FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S +A F ++ ++VV+WNAL++ + ++G +EA +F + RE V
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+ VHA +IK G +E ++ L+D YSK G L + + F ++ +++ TWN++++ +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 156 GLAKEAFGVFQAM 168
G EA +F++M
Sbjct: 100 GFLDEADSLFRSM 112
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 87/152 (57%), Gaps = 4/152 (2%)
Query: 28 YTHQVFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL-NLTAYTFTPVL 83
+ H +FD++ H DL S NS + +Y + + ALF M + L + + +L
Sbjct: 312 HAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNIL 371
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC++L A RG+QVH I+ G + V A++DMY+K G + E+ + F+ ++FKDVV
Sbjct: 372 PACASLAASLRGRQVHGFSIRSGLVDDVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVV 431
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+WNA+++ + + G + A +F+ MT E +E
Sbjct: 432 SWNAMVTGYSQAGRLEHALSLFERMTEENIEL 463
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFK 135
+T + L AC+ L A G+QVHA +++ S + V L+DMYSK G + + F
Sbjct: 614 FTLSCALVACARLAALRFGRQVHAYVLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFD 673
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ ++ V+W +L++ + HG ++A VF M +
Sbjct: 674 NMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEMRK 708
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V AC+ L + G +HA + + G S V A++ MY K G L + F +
Sbjct: 260 YTFPFVFKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDD 319
Query: 137 I---EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ +D+V+WN+++S+++ A A +F MT
Sbjct: 320 LCHRGIQDLVSWNSVVSAYMWASDANTALALFHKMT 355
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIK---------GGTDSEPVVKTALMDMYSKYGLLG 128
T +L AC ++ A GK+ H IK G D V+ L+DMY+K
Sbjct: 502 TLVSLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVI-NGLIDMYAKCQSTE 560
Query: 129 ESVEAFKEIEFKD--VVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F + KD VVTW ++ + +HG A A +F M
Sbjct: 561 VARKMFDSVSPKDRDVVTWTVMIGGYAQHGDANNALQLFSGM 602
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 63/157 (40%), Gaps = 8/157 (5%)
Query: 7 MTNFPAKTCISIADALPKRY-----VYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
+ NF + +A+ L Y V T Q VFD + + S S + Y
Sbjct: 640 LRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDA 699
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMD 119
+F M L TF VL ACS + G M K G D P ++D
Sbjct: 700 LRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVD 759
Query: 120 MYSKYGLLGESVEAFKEIEFKDV-VTWNALLSSFLRH 155
++ + G LGE+++ E+ + V W ALLS+ H
Sbjct: 760 LWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLH 796
>gi|302793743|ref|XP_002978636.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
gi|300153445|gb|EFJ20083.1| hypothetical protein SELMODRAFT_109283 [Selaginella moellendorffii]
Length = 438
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + +Y + + LF + + + + T VL AC++L A GK+VHA+
Sbjct: 35 NAMIAAYVQHGDSRQAIRLFDELLARRIEPNSVTLMEVLDACASLAALRDGKRVHAIARD 94
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G DSE V TA++DMYSK G L E+VEAF IE D V+W A+L++F +HG A
Sbjct: 95 HGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHDTVSWTAMLAAFAQHGHIDRALAT 154
Query: 165 FQAMTRE 171
FQ M +
Sbjct: 155 FQRMQEQ 161
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ ++ S N + Y ++ + + L M + T +L AC AL
Sbjct: 451 KVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALA 510
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
ERGK VHA +K G +S+ VV T+L+ MYSK G + E+ F ++ +D V WNA+L+
Sbjct: 511 GLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLA 570
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HG EA +F+ M +ERV
Sbjct: 571 GYGQHGDGLEAVDLFKRMLKERV 593
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS-----RNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
++FD +S D+ S ++ + Y +S + + L M + TF +L A
Sbjct: 314 EIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRA 373
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+A A E+G+Q+HA + K G + + ++TA+ +MY+K G + E+ + F ++ K+VV W
Sbjct: 374 CTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAW 433
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
+ LS +++ G A VF M
Sbjct: 434 TSFLSMYIKCGDLSSAEKVFSEM 456
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF ++ D+ + +S + +Y + + + F M + TF +L AC+
Sbjct: 112 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYS 171
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+G+++H ++ G +++ V TAL+ MYSK G + + E F ++ ++VV+W A++
Sbjct: 172 ILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQ 231
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +H EAF +++ M
Sbjct: 232 ANAQHRKLNEAFELYEQM 249
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF +++ ++ S + + + + R + L+ M ++ A TF +L +C+
Sbjct: 213 EVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPE 272
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A RG+++H+ + + G +++ +V AL+ MY K + E+ E F + +DV++W+A+++
Sbjct: 273 ALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIA 332
Query: 151 SFLRHGLA-KEAFG-VFQAMTRERVE 174
+ + G KE+ VFQ + R R E
Sbjct: 333 GYAQSGYKDKESIDEVFQLLERMRRE 358
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 57/103 (55%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
L + + T+ V+ C+ E GK VH + + G + + + +L++ YSK+ + +
Sbjct: 52 LLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAE 111
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ + +DVVTW+++++++ + +AF F+ MT +E
Sbjct: 112 QVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIE 154
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C + DAL +VF+ + DL + S + R R F LF M +
Sbjct: 253 CGGVDDAL--------KVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQP 304
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
F +L AC+ A E+GK+VHA M + G D+E V TAL+ MY+K G + +++E F
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVF 364
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++VV+W A+++ F +HG +EAF F M +E
Sbjct: 365 NLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+FDE+ D+ S N L Y + R + + L M + YTF +L AC+
Sbjct: 160 QIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAK 219
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G ++ +L++ G D++ V TAL++M+ K G + ++++ F + +D++TW ++++
Sbjct: 220 NVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMIT 279
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
RH K+A +FQ M E V+
Sbjct: 280 GLARHRQFKQACNLFQVMEEEGVQ 303
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DAL +VF+ + ++ S + + + + + F M + +
Sbjct: 354 CGSMEDAL--------EVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEP 405
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF +LGACS A ++G+Q+H +IK G ++ V+TAL+ MY+K G L ++ F
Sbjct: 406 NRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVF 465
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ I ++VV WNA+++++++H A FQA+ +E ++
Sbjct: 466 ERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIK 505
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA VF+ IS ++ + N+ + +Y + + A F + +
Sbjct: 455 CGSLMDA--------RNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKP 506
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TFT +L C + A E GK V +L+I+ G +S+ ++ AL+ M+ G L ++ F
Sbjct: 507 DSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLF 566
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ +D+V+WN +++ F++HG + AF F+ M V+
Sbjct: 567 NDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVK 606
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ DL S N+ + + + + F M + + TFT +L AC++
Sbjct: 564 NLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPE 623
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+++HAL+ + D + VV T L+ MY+K G + ++ F + K+V +W ++++
Sbjct: 624 ALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWTSMIT 683
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HG KEA +F M +E V+
Sbjct: 684 GYAQHGRGKEALELFCQMQQEGVK 707
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + T++ +L C G+++H + + + L+ MY+K G +
Sbjct: 100 IQIHRQTYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAK 159
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F E+ KDV +WN LL +++H +EAF + + M ++ V+
Sbjct: 160 QIFDEMPDKDVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVK 202
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 62/153 (40%), Gaps = 31/153 (20%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA H VF + ++ S S + Y + LFC M +
Sbjct: 657 CGSIDDA--------HLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKP 708
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGT---------DSEPVVK--TALMDMYSK 123
TF L AC+ HA +IK G + EP ++ ++D++ +
Sbjct: 709 DWITFVGALSACA-----------HAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGR 757
Query: 124 YGLLGESVEAFKEIEFK-DVVTWNALLSSFLRH 155
GLL E+VE +++ K D W ALL + H
Sbjct: 758 AGLLHEAVEFINKMQVKPDSRLWGALLGACQVH 790
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 77/153 (50%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
+LP R Y HQ+FDE D+S N LF ++R+ + LF +HS+ L + T +
Sbjct: 49 SLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLS 108
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
L C L G+QVH +K G + V T+L+DMY K + F E+ K
Sbjct: 109 CALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK 168
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+VV+W +LLS + R+GL E + M E V
Sbjct: 169 NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGV 201
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 17 SIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
S+A AL YV T +VF I D+ + ++ L ++R+ +F +
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
Query: 71 CLNLTAYTFTPVLGACSALPAP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YTF+ V+ ACS+ A E GKQ+HA +K G + V +AL+ MYSK G +
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + F E +D+V+WN++++ + +HG AK+A VFQ M +
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +L Y+ T +FDE+ ++ S S L Y R+ L M
Sbjct: 139 VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQM 198
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+N +TF VLGA + E G QVHA+++K G + V AL+ MY K ++G+
Sbjct: 199 EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGD 258
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F + +D VTWN ++ + G E F +F M
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL-GACSALPAPERGKQVHALMIKGGTD 108
+ ++ N LFC M + +T++ VL G S+L + Q+HA +IK +
Sbjct: 382 GFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYE 436
Query: 109 SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
P V TAL+D Y K G + ES F I KD+V W+A+L+ + +++A VF +
Sbjct: 437 KVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQL 496
Query: 169 TRERVE 174
+E V+
Sbjct: 497 VKEGVK 502
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D + N + Y + + +F M + L+ F L CS
Sbjct: 262 VFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRE 321
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
KQ+H ++K G + ++TALM YSK + E+ + F + +VVTW A++
Sbjct: 322 LNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIG 381
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
F+++ K+A +F M+RE V
Sbjct: 382 GFVQNNNNKKAVDLFCQMSREGV 404
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF D+ S NS + Y + + +F M + L L TF VL AC+
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT-WNAL 148
E G++ +MIK D + + ++D+YS+ G+ ++++ + F T W L
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 149 LSSFLRH 155
L++ H
Sbjct: 682 LAACRVH 688
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 77/153 (50%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
+LP R Y HQ+FDE D+S N LF ++R+ + LF +HS+ L + T +
Sbjct: 49 SLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLS 108
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
L C L G+QVH +K G + V T+L+DMY K + F E+ K
Sbjct: 109 CALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIK 168
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+VV+W +LLS + R+GL E + M E V
Sbjct: 169 NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGV 201
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 7/162 (4%)
Query: 17 SIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
S+A AL YV T +VF I D+ + ++ L ++R+ +F +
Sbjct: 440 SVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKE 499
Query: 71 CLNLTAYTFTPVLGACSALPAP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YTF+ V+ ACS+ A E GKQ+HA +K G + V +AL+ MYSK G +
Sbjct: 500 GVKPNEYTFSSVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIES 559
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + F E +D+V+WN++++ + +HG AK+A VFQ M +
Sbjct: 560 AEKVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQ 601
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +L Y+ T +FDE+ ++ S S L Y R+ L M
Sbjct: 139 VSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARNGLNDEVIHLINQMQM 198
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+N +TF VLGA + E G QVHA+++K G + V AL+ MY K ++G+
Sbjct: 199 EGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVCNALICMYLKSEMVGD 258
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F + +D VTWN ++ + G E F +F M
Sbjct: 259 AEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRM 297
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 65/126 (51%), Gaps = 6/126 (4%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL-GACSALPAPERGKQVHALMIKGGTD 108
+ ++ N LFC M + +T++ VL G S+L + Q+HA +IK +
Sbjct: 382 GFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLLS-----QLHAQIIKAYYE 436
Query: 109 SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
P V TAL+D Y K G + ES F I KD+V W+A+L+ + +++A VF +
Sbjct: 437 KVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQL 496
Query: 169 TRERVE 174
+E V+
Sbjct: 497 VKEGVK 502
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D + N + Y + + +F M + L+ F L CS
Sbjct: 262 VFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRE 321
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
KQ+H ++K G + ++TALM YSK + E+ + F + +VVTW A++
Sbjct: 322 LNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKLFSMADAAHNVVTWTAMIG 381
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
F+++ ++A +F M+RE V
Sbjct: 382 GFVQNNNNEKAVDLFCQMSREGV 404
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF D+ S NS + Y + + +F M + L L TF VL AC+
Sbjct: 562 KVFTRQEERDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAG 621
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT-WNAL 148
E G++ +MIK D + + ++D+YS+ G+ ++++ + F T W L
Sbjct: 622 LVEEGEKYFNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTL 681
Query: 149 LSSFLRH 155
L++ H
Sbjct: 682 LAACRVH 688
>gi|302802776|ref|XP_002983142.1| hypothetical protein SELMODRAFT_117546 [Selaginella moellendorffii]
gi|300149295|gb|EFJ15951.1| hypothetical protein SELMODRAFT_117546 [Selaginella moellendorffii]
Length = 544
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA ++FDE+ D S + +Y+ ++ LF M +
Sbjct: 55 CGSLRDA--------QRMFDEMVSRDAILWTSMISAYSERGHYKTALKLFQRMQGESVKP 106
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF VL C + A + GK +H+ + G +++ +VKTAL++MY K G L ++ + F
Sbjct: 107 DNVTFVTVLNCCGKMSALQEGKLIHSQLTGNGFENDLIVKTALLNMYGKCGSLTDARKVF 166
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+EI+ KD++TWNA+LS +++H +EA +++ M
Sbjct: 167 EEIQGKDIITWNAMLSVYVQHSAYEEALELYRKM 200
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VF+EI D+ + N+ L Y + + L+ M L
Sbjct: 156 CGSLTDA--------RKVFEEIQGKDIITWNAMLSVYVQHSAYEEALELYRKME---LTP 204
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TF V+ AC+ A E G+QVHA++ G ++E V +AL++MY K G L ++ + F
Sbjct: 205 SVSTFVTVINACAGATALEDGRQVHAVVTARGLETEDAVSSALLNMYGKCGSLEDAAKVF 264
Query: 135 -KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K E+ DV W ++S + + +KEA G+F+ M E V
Sbjct: 265 WKRREYDDVA-WAHMISFYTQWHRSKEALGLFRLMRLEGV 303
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA + + + +D+++ + S YT+ LF M + +
Sbjct: 254 CGSLEDA--AKVFWKRREYDDVAWAHMISF------YTQWHRSKEALGLFRLMRLEGVRV 305
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ FT L AC+ G+ +HA + + G +S+ VV++AL+ MY + GL + E F
Sbjct: 306 DKFAFTTTLSACNGAECLAEGRLLHAGIEESGFESDVVVRSALIHMYGRCGLYDAAWELF 365
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
+ + K+V+ +A++++ RHG +E V+Q
Sbjct: 366 QSVPTKNVLLSSAMIATCERHGHWRELLDVYQ 397
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ VL C+ A ++GK++H+ + G + + ++ L++MY K G L ++ F E+
Sbjct: 9 TYARVLRVCAKNKALQQGKKIHSYIRDSGQEQDRILGNHLIEMYLKCGSLRDAQRMFDEM 68
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+D + W +++S++ G K A +FQ M E V+
Sbjct: 69 VSRDAILWTSMISAYSERGHYKTALKLFQRMQGESVK 105
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL AC+ L ERGK VH + + ++ AL+ MY K G L ++ F
Sbjct: 407 TIISVLKACAELQELERGKAVHESIKGKDLYQDGGIREALLGMYCKCGALEDAQNLFDRT 466
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K WNALL ++++ G + A +F+ M VE
Sbjct: 467 PDKSTAFWNALLDAYVKQGQLERASELFEQMQANDVE 503
>gi|302764952|ref|XP_002965897.1| hypothetical protein SELMODRAFT_85072 [Selaginella moellendorffii]
gi|300166711|gb|EFJ33317.1| hypothetical protein SELMODRAFT_85072 [Selaginella moellendorffii]
Length = 318
Score = 92.8 bits (229), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 84/154 (54%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA ++FDE+ D S + +Y+ ++ LF M +
Sbjct: 55 CGSLRDA--------QRMFDEMVSRDAILWTSMISAYSERGHYKMALKLFQRMQGESVKP 106
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF VL C + A + GK +H+ + G +++ +VKTAL++MY K G L ++ + F
Sbjct: 107 DNVTFVTVLNCCGKMSALQEGKLIHSQLTGNGFENDLIVKTALLNMYGKCGSLTDARKVF 166
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+EI+ KD++TWNA+LS +++H +EA +++ M
Sbjct: 167 EEIQGKDIITWNAMLSVYVQHSAYEEALELYRKM 200
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VF+EI D+ + N+ L Y + + L+ M L
Sbjct: 156 CGSLTDA--------RKVFEEIQGKDIITWNAMLSVYVQHSAYEEALELYRKME---LTP 204
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TF V+ AC+ A E G+QVHA++ G ++E V +AL++MY K G L ++ + F
Sbjct: 205 SVSTFVTVINACAGATALEDGRQVHAVVTARGLETEDAVSSALLNMYGKCGSLEDAAKVF 264
Query: 135 -KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K E+ DV W ++S + + +KEA G+F+ M E V
Sbjct: 265 WKRREYDDVA-WAHMISFYTQWHRSKEALGLFRLMRLEGV 303
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 54/97 (55%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ VL C+ A ++GK++H+ + G + + ++ L++MY K G L ++ F E+
Sbjct: 9 TYARVLRVCAKNKALQQGKKIHSYIRDSGQEQDRILGNHLIEMYLKCGSLRDAQRMFDEM 68
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+D + W +++S++ G K A +FQ M E V+
Sbjct: 69 VSRDAILWTSMISAYSERGHYKMALKLFQRMQGESVK 105
>gi|302789766|ref|XP_002976651.1| hypothetical protein SELMODRAFT_105614 [Selaginella moellendorffii]
gi|300155689|gb|EFJ22320.1| hypothetical protein SELMODRAFT_105614 [Selaginella moellendorffii]
Length = 341
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD +S+ D + + + +Y + + LF M + + +T+ V+ AC+ +
Sbjct: 66 EVFDRMSYRDTVAWTAMIAAYAHTGHPRQAMELFKAMDTWDVRPDGFTYASVINACTGMG 125
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G VH +++ G D +PVV+ +L+DMYSK G LGE+ F ++ +DV TW AL S
Sbjct: 126 ALADGMVVHREIVRDGFDGDPVVQNSLVDMYSKCGSLGEARAVFDDMVKRDVATWTALFS 185
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ +HG EA F M E
Sbjct: 186 GYAKHGFNNEALETFWCMALE 206
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 57/102 (55%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + + T++ F+ +L AC G ++H+ ++ G S+ VV T L+ MYS+ G
Sbjct: 1 MDTAKVRPTSFFFSGILAACLEPGDLPTGMRIHSHIVDCGCGSDIVVATGLIGMYSRCGS 60
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + E F + ++D V W A+++++ G ++A +F+AM
Sbjct: 61 VDRAREVFDRMSYRDTVAWTAMIAAYAHTGHPRQAMELFKAM 102
>gi|297741829|emb|CBI33142.3| unnamed protein product [Vitis vinifera]
Length = 1198
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 78/143 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+I DL+S N+ + Y ++ + L M + T VL ACS+L +
Sbjct: 183 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 242
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G++ H L++K G +S + AL+ MY K G + +S AF++I+ DVV+WNA++++
Sbjct: 243 LQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAA 302
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F RHG A F M RVE
Sbjct: 303 FARHGFYDRALASFGEMRSNRVE 325
Score = 38.1 bits (87), Expect = 1.4, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
TA++D Y+K G + ++ F + K+VV+W ++S ++ +G EA +F+ M + +
Sbjct: 103 TAMVDGYAKIGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 161
Score = 37.4 bits (85), Expect = 2.1, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D V TA++ Y K G ++ F +I +D+ +WNA+++ + ++G +EA +
Sbjct: 158 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 217
Query: 168 MTR 170
M +
Sbjct: 218 MLK 220
>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
Length = 637
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 78/139 (56%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + + R + T +F M T +T++ V A + + A
Sbjct: 222 VFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 281
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK G V ++DMY+K G + ++ + F ++ KDVVTWN++L++
Sbjct: 282 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA 341
Query: 152 FLRHGLAKEAFGVFQAMTR 170
F ++GL +EA F+ M +
Sbjct: 342 FAQYGLGREAVTHFEEMRK 360
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++ADA +VFD + D+ S S + Y ++ L M
Sbjct: 112 CGAVADA--------RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF +L A A + G+Q+HAL +K + V +AL+DMY++ G + ++ F
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 223
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++E K+ V+WNAL++ F R G + +F M R E
Sbjct: 224 DQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
R++ F T + + A + +VFD + D+ + NS L ++ + F
Sbjct: 298 RLSAFVGNTILDMY-AKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFE 356
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M ++L TF +L ACS + GKQ +M + + E ++D+ + G
Sbjct: 357 EMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAG 416
Query: 126 LLGES-VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
LL ++ V FK W ALL S H AK G F A
Sbjct: 417 LLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAA 457
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 48/101 (47%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
L T + ++ AC+ + + + +HA + + +L+ +Y K G + ++
Sbjct: 60 LAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADAR 119
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
F + +D+ +W +L++ + ++ + EA G+ M R R
Sbjct: 120 RVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR 160
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRN 56
F+ + F + +I +L YV + FD+I + S +S + Y + +
Sbjct: 597 GFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGD 656
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
F LF + + ++ + ++G + ++GKQ+ AL++K + E V +
Sbjct: 657 FVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNS 716
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L+DMY K GL+ E+ + F E++ KDV++W +++ + +HGL K+A +F M R +E
Sbjct: 717 LVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIE 774
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 77/151 (50%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+ + ++VFD + ++ S + + + + + + +LF M + +TF+ L
Sbjct: 418 REQLIAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNL 477
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC L A E+G Q+H +K G + V +L+DMYSK G + E+ + F+ + + ++
Sbjct: 478 KACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLI 537
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+WNA+++ ++ G A F M +++
Sbjct: 538 SWNAMIAGYVHAGYGSRALATFGMMQEAKIK 568
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 6/158 (3%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K R +VF + L S N+ + Y + A F M +
Sbjct: 510 SLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKE 569
Query: 75 --TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGES 130
+T T +L ACS+ GKQ+H +++ G S + +L+D+Y K G L +
Sbjct: 570 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSA 629
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+AF +I+ K +++W++L+ + + G EA G+F+ +
Sbjct: 630 RKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRL 667
>gi|168032055|ref|XP_001768535.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680248|gb|EDQ66686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA QVFD + D+ + L Y + + ++ M + +
Sbjct: 97 CGSLVDA--------RQVFDRMVERDMFTYTMMLTGYAKLGYPEDAYKMYEQMQKERVPV 148
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TFT +L CS L + E+G +VH M++GG + ++ L+DMY+K G L ++ F
Sbjct: 149 DRITFTTILNVCSTLRSLEKGMKVHQDMVRGGIRPDIILGNTLIDMYAKCGNLKQAHRVF 208
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
KE++ +D+VTWN ++ R+G EAF F+AM E
Sbjct: 209 KEMDNRDIVTWNIMVGGAARNGYFDEAFEFFKAMLDE 245
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DAL +VF ++ ++ S S + +Y ++ + M + +
Sbjct: 296 CGSVVDAL--------KVFQKLPQRNVVSWTSVISAYAQAGEPERALECYAKMLNEGMVA 347
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T +L C+ L E+GK VH +++ G ++ + + L+DMY K G L ++ F
Sbjct: 348 DKRAYTTILNVCAMLGDIEKGKAVHGHIVQSGIATDIITENGLIDMYVKCGRLKDAYRLF 407
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ +DVV+W L+ +++H +EA F M E V
Sbjct: 408 QDMNVRDVVSWTTLIEGWVQHRQYQEALDTFNDMQLEGV 446
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF E+ + D+ + N + R+ F + F M T+ +L AC++L
Sbjct: 205 HRVFKEMDNRDIVTWNIMVGGAARNGYFDEAFEFFKAMLDEGQKPDKVTYISILNACTSL 264
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E+G +H++++K G + + V TAL++M+SK G + ++++ F+++ ++VV+W +++
Sbjct: 265 ---EQGTLLHSVIMKAGFELDVRVGTALVNMFSKCGSVVDALKVFQKLPQRNVVSWTSVI 321
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S++ + G + A + M E
Sbjct: 322 SAYAQAGEPERALECYAKMLNE 343
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++Y + +L C+ + GK VHA M K V AL++MY K G L ++ + F
Sbjct: 48 SSYAYVCLLRRCTHMKDLAEGKYVHAHMAKSDFVPTTFVLNALVNMYMKCGSLVDARQVF 107
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ +D+ T+ +L+ + + G ++A+ +++ M +ERV
Sbjct: 108 DRMVERDMFTYTMMLTGYAKLGYPEDAYKMYEQMQKERV 146
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+++F +++ D+ S + + + + R + F M + TF VL AC+ +
Sbjct: 404 YRLFQDMNVRDVVSWTTLIEGWVQHRQYQEALDTFNDMQLEGVMPNTVTFLGVLKACAGM 463
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
+ GK++HA +++ G ++ AL DMY+K
Sbjct: 464 GSLVDGKRIHARIVEAGLAENAHIRHALADMYAK 497
>gi|357521583|ref|XP_003631080.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525102|gb|AET05556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD ++ D S + + Y ++ ++ + M +L TF L C+ +
Sbjct: 317 ELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMA 376
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQVH +K G D+ +V AL++MY K G +GE+ + F+ ++ KD+++WN +L+
Sbjct: 377 ALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTMLA 436
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ RHG ++A VF +M
Sbjct: 437 GYARHGFGRQALLVFDSM 454
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKT 115
FP W L Y+ TC++ VL ACS +RG + M K G
Sbjct: 537 FPCNWLLSLYL--TCIHNVG-----VLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYN 589
Query: 116 ALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRHGLAK 159
++D+ + GLL E+ + + F+ D TW ALL + HG A+
Sbjct: 590 CMIDLLGRAGLLEEAHNLMRNMPFEPDAATWGALLGASRIHGNAE 634
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+ V ++ Y + G + E+ F + +KD ++WN LL+ ++++G +EA +F++
Sbjct: 109 DAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFES 166
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 30/152 (19%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNF---------PATWALFCYMHSTCLNLTAYTFTPV 82
VFD + + D S N L Y ++ W L + CL + Y +
Sbjct: 132 VFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELISW---NCL-MGGYVKRKM 187
Query: 83 LGACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
LG L P R MI G Y++ G L ++ F+E +
Sbjct: 188 LGDARRLFDHMPVRNAISWNTMISG---------------YARDGDLLQARRLFEESPVR 232
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
DV TW A++ ++++ G+ EA VF M +R
Sbjct: 233 DVFTWTAMVFAYVQSGMLDEARRVFDEMPGKR 264
>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 697
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 78/139 (56%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + + R + T +F M T +T++ V A + + A
Sbjct: 222 VFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 281
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK G V ++DMY+K G + ++ + F ++ KDVVTWN++L++
Sbjct: 282 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTA 341
Query: 152 FLRHGLAKEAFGVFQAMTR 170
F ++GL +EA F+ M +
Sbjct: 342 FAQYGLGREAVTHFEEMRK 360
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++ADA +VFD + D+ S S + Y ++ L M
Sbjct: 112 CGAVADA--------RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKP 163
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF +L A A + G+Q+HAL +K + V +AL+DMY++ G + ++ F
Sbjct: 164 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 223
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++E K+ V+WNAL++ F R G + +F M R E
Sbjct: 224 DQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 263
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
R++ F T + + A + +VFD + D+ + NS L ++ + F
Sbjct: 298 RLSAFVGNTILDMY-AKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFE 356
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M ++L TF +L ACS + GKQ +M + + E ++D+ + G
Sbjct: 357 EMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLEPEIDHYVTVVDLLGRAG 416
Query: 126 LLGES-VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
LL ++ V FK W ALL S H AK G F A
Sbjct: 417 LLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAA 457
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 48/101 (47%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
L T + ++ AC+ + + + +HA + + +L+ +Y K G + ++
Sbjct: 60 LAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADAR 119
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
F + +D+ +W +L++ + ++ + EA G+ M R R
Sbjct: 120 RVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGR 160
>gi|359480506|ref|XP_003632478.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 590
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+I DL+S N+ + Y ++ + L M + T VL ACS+L +
Sbjct: 255 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 314
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G++ H L++K G +S + AL+ MY K G + +S AF++I+ DVV+WNA++++
Sbjct: 315 LQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAA 374
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F RHG A F M RVE
Sbjct: 375 FARHGFYDRALASFGEMRSNRVE 397
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA-- 88
Q+FDE+ H D S NS + Y ++ F + LF M + ++ ++ C
Sbjct: 68 QLFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTK----NVVSWNSMIAGCIEDE 123
Query: 89 ---------LPAPERGKQVHALMIKGGTDSEPVVK----------------TALMDMYSK 123
P+R MI G + V + TA++D Y+K
Sbjct: 124 RIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAK 183
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G + ++ F + K+VV+W ++S ++ +G EA +F+ M + +
Sbjct: 184 IGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQMPDKNI 233
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D V TA++ Y K G ++ F +I +D+ +WNA+++ + ++G +EA +
Sbjct: 230 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 289
Query: 168 MTR 170
M +
Sbjct: 290 MLK 292
>gi|144923518|gb|ABP02616.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 501
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 76/139 (54%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD ++ D S + + Y ++ ++ + M +L TF L C+ +
Sbjct: 295 RELFDMMTQRDCVSWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGM 354
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A GKQVH +K G D+ +V AL++MY K G +GE+ + F+ ++ KD+++WN +L
Sbjct: 355 AALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFERMQLKDIISWNTML 414
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + RHG ++A VF +M
Sbjct: 415 AGYARHGFGRQALLVFDSM 433
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 59/152 (38%), Gaps = 30/152 (19%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNF---------PATWALFCYMHSTCLNLTAYTFTPV 82
VFD + + D S N L Y ++ W L + CL + Y +
Sbjct: 111 VFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWELISW---NCL-MGGYVKRKM 166
Query: 83 LGACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
LG L P R MI G Y++ G L ++ F+E +
Sbjct: 167 LGDARRLFDHMPVRNAISWNTMISG---------------YARDGDLLQARRLFEESPVR 211
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
DV TW A++ ++++ G+ EA VF M +R
Sbjct: 212 DVFTWTAMVFAYVQSGMLDEARRVFDEMPGKR 243
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 34/58 (58%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+ V ++ Y + G + E+ F + +KD ++WN LL+ ++++G +EA +F++
Sbjct: 88 DAVSWNVMLSGYVRSGCVDEAKLVFDNMPYKDSISWNGLLAVYVQNGRLEEARRLFES 145
>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Cucumis sativus]
Length = 706
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA H VFDE+ + NS + Y L+ M + + +
Sbjct: 281 CGSLEDA--------HCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRDSGVKM 332
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ ++ CS L + R KQVHA +++ G + V TAL+D YSK+G + ++ F
Sbjct: 333 DHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDDARHVF 392
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +++++WNAL++ + HG +EA +F+ M RE
Sbjct: 393 DRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLRE 429
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ + S + + Y S N+ + LF M + TF ++ A + L
Sbjct: 188 RLFDEMPARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLE 247
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H+ IK G + V AL+DMYSK G L ++ F E+ K +V WN++++
Sbjct: 248 IIFPGRQLHSCAIKAGLGQDIFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIA 307
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG ++EA ++ M
Sbjct: 308 GYALHGYSEEALDLYHEM 325
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 49/94 (52%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ ++ AC L + K++ M+ G + + ++ ++ M+ K G++ ++ F E+
Sbjct: 134 TYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMIDACRLFDEM 193
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ V+W ++S ++ G EAF +F M E
Sbjct: 194 PARNAVSWGTIISGYVDSGNYVEAFRLFILMREE 227
Score = 35.8 bits (81), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD +S ++ S N+ + Y + +F M + TF VL ACS
Sbjct: 390 HVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSISG 449
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFKDVVT-WNAL 148
ERG ++ M + + A M ++ + GLL E+ ++ F+ W AL
Sbjct: 450 LFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWAAL 509
Query: 149 LSSFLRHG 156
L + HG
Sbjct: 510 LRACRVHG 517
>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD + D S ++ + Y+++ F M C L +FT L CS +
Sbjct: 135 NLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIA 194
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G+Q+H ++K G + V AL+ MY K G + E+ +AF+EI KDVV+WN ++
Sbjct: 195 ALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIH 254
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ RHG +EA VF+ M
Sbjct: 255 GYARHGFGEEALTVFELM 272
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
F EI D+ S N+ + Y R +F M +T + T VL ACS
Sbjct: 236 DAFQEILEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAG 295
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
++G + M + G ++ V T ++D+ + G L E+ K + F+ D TW AL
Sbjct: 296 LVDQGSEYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGAL 355
Query: 149 LSSFLRHG 156
L + HG
Sbjct: 356 LGASRIHG 363
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+E++ D+ N+ F YT+ L+ + + +TF ++ A S L
Sbjct: 488 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 547
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q H ++K G D P V AL+DMY+K G + E+ + F ++DVV WN+++S
Sbjct: 548 SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIS 607
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A+EA G+F+ M +E ++
Sbjct: 608 THAQHGEAEEALGMFREMMKEGIQ 631
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++S + + + YT+ + LF M T + Y + VL ACS L
Sbjct: 186 VFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEF 245
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+HA +++ GT+ + V L+D Y+K + + F ++ K++++W ++S
Sbjct: 246 LEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG 305
Query: 152 FLRHGLAKEAFGVFQAMTR 170
++++ EA +F M R
Sbjct: 306 YMQNSFDWEAMKLFGEMNR 324
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD ++ ++ S N+ + Y+ LF M + TF +LG ++L
Sbjct: 387 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLF 446
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E KQ+H L+IK G + +AL+D+YSK + ++ F+E+ KD+V WNA+
Sbjct: 447 ALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFF 506
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ +H +EA ++ + R
Sbjct: 507 GYTQHLENEEALKLYSTLQFSR 528
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ + L Y ++V FD++ ++ S + + Y ++ LF M+
Sbjct: 265 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 324
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ T VL +C + A E+G+QVHA IK +S+ VK L+DMY+K LL +
Sbjct: 325 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 384
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F + ++V+++NA++ + EA +F M
Sbjct: 385 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 423
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 1 MLSFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
++S ++ F A I++ R VFD++ H +L + +S + Y++
Sbjct: 54 IVSGLQSDTFLANILINVCSK-SDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEA 112
Query: 61 WALFCYMH-STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
+F + + + + V+ AC+ L E+G Q+H +++ G D + V T+L+D
Sbjct: 113 LMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLID 172
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
YSK G + E+ F ++ K VTW +++ + + G + + +F M V
Sbjct: 173 FYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNV 226
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 78/141 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD++ D S + + Y++S + LF M L +F+ L C+ +
Sbjct: 359 NLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVV 418
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GKQ+H ++KGG ++ V AL+ MY K G + E+ + FKE+ KD+V+WN +++
Sbjct: 419 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 478
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ RHG +EA F++M RE
Sbjct: 479 GYSRHGFGEEALRFFESMKRE 499
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 12/139 (8%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--HSTCLNLTAYTFTPVLGACSAL 89
+FDE+ DL S N + Y R+RN LF M C ++ +L +
Sbjct: 112 LFDEMPERDLVSWNVMIKGYVRNRNLGKARELFERMPERDVC------SWNTILSGYAQN 165
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ ++V M + V AL+ Y + L E+ F E +V+WN LL
Sbjct: 166 GCVDDARRVFDRM----PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLL 221
Query: 150 SSFLRHGLAKEAFGVFQAM 168
F++ EA F +M
Sbjct: 222 GGFVKKKKIVEARQFFDSM 240
>gi|115453187|ref|NP_001050194.1| Os03g0369700 [Oryza sativa Japonica Group]
gi|12039352|gb|AAG46139.1|AC082644_21 hypothetical protein [Oryza sativa Japonica Group]
gi|108708369|gb|ABF96164.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548665|dbj|BAF12108.1| Os03g0369700 [Oryza sativa Japonica Group]
gi|125544037|gb|EAY90176.1| hypothetical protein OsI_11741 [Oryza sativa Indica Group]
gi|125586399|gb|EAZ27063.1| hypothetical protein OsJ_10992 [Oryza sativa Japonica Group]
Length = 513
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRN-FPATWALFCYMHSTCLNLTAYTFTPVLG 84
Y ++F+ + D+ N+ + Y+++ ++ +F MH T TF VLG
Sbjct: 209 YEDAEEIFNTMDEKDVVVYNAMVEGYSKTEETAESSMEVFKSMHRARFRPTVSTFVSVLG 268
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS L +PE G+QVH +IK S+ +AL+DMYSK G + + F + ++V+T
Sbjct: 269 ACSLLSSPEIGEQVHCQVIKSSLSSDIKAGSALLDMYSKCGRVDDGRRIFDRMAERNVIT 328
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTR 170
W +++ + ++GL+ EA +F+ M R
Sbjct: 329 WTSMIDGYGKNGLSDEALQLFEQMLR 354
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%)
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
P ++VHA +++ +S+ V+ AL+D Y K L + F + + VV+ AL+
Sbjct: 143 PRAVREVHARVVRSVVESDDVLFAALVDAYVKNASLRYARRVFDVMPVRTVVSSTALIVG 202
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ GL ++A +F M + V
Sbjct: 203 CMNEGLYEDAEEIFNTMDEKDV 224
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+E++ D+ N+ F YT+ L+ + + +TF ++ A S L
Sbjct: 396 HVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLA 455
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q H ++K G D P V AL+DMY+K G + E+ + F ++DVV WN+++S
Sbjct: 456 SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIS 515
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A+EA G+F+ M +E ++
Sbjct: 516 THAQHGEAEEALGMFREMMKEGIQ 539
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD ++ ++ S N+ + Y+ LF M + TF +LG ++L
Sbjct: 295 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLF 354
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E KQ+H L+IK G + +AL+D+YSK + ++ F+E+ KD+V WNA+
Sbjct: 355 ALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFF 414
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ +H +EA ++ + R
Sbjct: 415 GYTQHLENEEALKLYSTLQFSR 436
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + + + YT+ + LF M T + Y + VL ACS L
Sbjct: 94 VFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEF 153
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+HA +++ GT+ + V L+D Y+K + + F ++ K++++W ++S
Sbjct: 154 LEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG 213
Query: 152 FLRHGLAKEAFGVFQAMTR 170
++++ EA +F M R
Sbjct: 214 YMQNSFDWEAMKLFGEMNR 232
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ + L Y ++V FD++ ++ S + + Y ++ LF M+
Sbjct: 173 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 232
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ T VL +C +L A E+G+QVHA IK +S VK L+DMY+K LL +
Sbjct: 233 LGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXD 292
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F + ++V+++NA++ + EA +F M
Sbjct: 293 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 331
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 50/97 (51%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ V+ AC+ L E+G Q+H +++ G D + V T+L+D YSK G + + F +
Sbjct: 38 FVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQ 97
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ K VTW +++ + + G + + +F M V
Sbjct: 98 LLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
Length = 513
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 78/139 (56%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + + R + T +F M T +T++ V A + + A
Sbjct: 98 VFDQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 157
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK G V ++DMY+K G + ++ + F ++ KD+VTWN++L++
Sbjct: 158 LEQGKWVHAHMIKSGERLSAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTA 217
Query: 152 FLRHGLAKEAFGVFQAMTR 170
F ++GL +EA F+ M +
Sbjct: 218 FAQYGLGREAVTHFEEMRK 236
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 55/100 (55%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF +L A A + G+Q+HAL +K + V +AL+DMY++ G + ++ F
Sbjct: 40 NGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVF 99
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++E K+ V+WNAL++ F R G + +F M R E
Sbjct: 100 DQLESKNGVSWNALIAGFARKGDGETTLLMFAEMQRNGFE 139
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 4/163 (2%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
R++ F T + + A + +VFD + DL + NS L ++ + F
Sbjct: 174 RLSAFVGNTILDMY-AKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFE 232
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M ++L TF +L ACS + GKQ +M + + E ++D+ + G
Sbjct: 233 EMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAG 292
Query: 126 LLGES-VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
LL ++ V FK W ALL S H AK G F A
Sbjct: 293 LLNDALVFIFKMPMKPTAAVWGALLGSCRMHKNAK--IGQFAA 333
>gi|255551082|ref|XP_002516589.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544409|gb|EEF45930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 367
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 90/178 (50%), Gaps = 6/178 (3%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRN 56
SF+ ++ FP SIA AL +YV +VF +I ++ S ++ Y N
Sbjct: 135 SFLIISGFPYLIKTSIAGALIDQYVKCGKLCEAQRVFSQIEEKNVISFSALFLGYAHGGN 194
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
+LF + + + + ++G + E+GKQ+HA IK + S+ V +
Sbjct: 195 LADAMSLFRRFRESDVEADGFVLSSMIGVFADFALVEQGKQMHAYSIKVPSGSDLSVCNS 254
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++DMY K G++ E+ F E+ +DV++W +++ + +HGL KEA +F M + +E
Sbjct: 255 IVDMYLKCGVIDEAERFFAEMSTRDVISWTVMITGYGKHGLGKEAVCLFNKMQSDDIE 312
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 55/98 (56%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF+ L A S L P G Q+HA K G D VV +++DMYSK G + E+ F
Sbjct: 11 FTFSMNLKASSMLNRPYIGMQIHANCTKSGNDIVIVVANSIVDMYSKCGRIKEAACMFDF 70
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +++++WN+++S + G ++A +F+ M + E
Sbjct: 71 MPVRNLISWNSMISGYSIAGFGEKAVVLFREMLEDGQE 108
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + +L S NS + Y+ + LF M +T T L ACS L A
Sbjct: 67 MFDFMPVRNLISWNSMISGYSIAGFGEKAVVLFREMLEDGQEPDEFTLTSALKACSDLAA 126
Query: 92 PERGKQVHALMIKGGTDS--EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G Q+H+ +I G + + AL+D Y K G L E+ F +IE K+V++++AL
Sbjct: 127 VREGSQIHSFLIISGFPYLIKTSIAGALIDQYVKCGKLCEAQRVFSQIEEKNVISFSALF 186
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ G +A +F+ VE
Sbjct: 187 LGYAHGGNLADAMSLFRRFRESDVE 211
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
S A LP Y +F+ I + S+ N + R+ LF MH +
Sbjct: 62 SAALLLPDTIDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDK 121
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF+ VL ACS + A G+QVHAL++K G S V+ L+ MY+ G +G + F
Sbjct: 122 FTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDG 181
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + +V WN++LS + ++GL E +F+ + R+EF
Sbjct: 182 MPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEF 220
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 69/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D+ + ++ + Y ++ LF M + T VL +C+ L
Sbjct: 278 KLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLG 337
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GK VH + K + T L+D Y+K G + SVE FKE+ FK+V TW AL+
Sbjct: 338 AYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQ 397
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+G K A F +M V+
Sbjct: 398 GLANNGEGKMALEFFSSMLENDVK 421
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD + + + NS L YT++ + LF + + T VL AC L
Sbjct: 177 HVFDGMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLA 236
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+ + ++ G + T+L+DMY+K G + + + F E++ +DVV W+A++S
Sbjct: 237 NLEIGELIGEYIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMIS 296
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + KEA +F M + V
Sbjct: 297 GYAQADRCKEALNLFHEMQKGNV 319
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 77/141 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD ++ D+ + N+ + Y ++ +LF M C+ T T VL AC+ +
Sbjct: 274 RIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITLTAVLSACATIG 333
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+ + G + V TAL+DMY+K G L + FKE+ K+ +WNA++S
Sbjct: 334 ALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKNEASWNAMIS 393
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ HG AKEA +FQ M+ E
Sbjct: 394 ALASHGKAKEALSLFQCMSDE 414
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVL 83
R + +VFDEI DL S NS + Y ++ +F M + VL
Sbjct: 166 RVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAVEVFGEMGRRDGFEPDEMSLVSVL 225
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
GAC L E G+ V +++ G + +AL+ MY+K G LG + F + +DV+
Sbjct: 226 GACGELGDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGDLGSARRIFDGMAARDVI 285
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
TWNA++S + ++G+A EA +F AM + V
Sbjct: 286 TWNAVISGYAQNGMADEAISLFHAMKEDCV 315
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 24 KRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTP 81
K + Y +F I+ H + + N + + T + ++P LF M S L+ +TF
Sbjct: 62 KNFTYASLLFSHIAPHPNDYAFNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPF 121
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+C+ L + H+L+ K S+P +L+ MYS+ G + + + F EI +D
Sbjct: 122 FFLSCANLAVLSPARAAHSLVFKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRD 181
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+V+WN++++ + + G A+EA VF M R
Sbjct: 182 LVSWNSMIAGYAKAGCAREAVEVFGEMGR 210
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 66/106 (62%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
F YMH+ + YTF +L ACS++ A G+QVH ++K G S V++AL+DMY+
Sbjct: 252 FFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYA 311
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K G L + + +E DVV+WN+L+ F+RHGL +EA +F+ M
Sbjct: 312 KCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNM 357
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 79/158 (50%), Gaps = 6/158 (3%)
Query: 18 IADALPKRYVYT------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
+++AL Y T + VF+++ D+ S S + Y ++ + + +FC M T
Sbjct: 401 VSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTG 460
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+N + +L AC+ L E GKQVH IK G V +L+ MY+K G L ++
Sbjct: 461 VNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDAD 520
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F ++ KDV+TW A++ + ++G + + + AM
Sbjct: 521 AIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMV 558
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ + + D+ S NS + + R LF MH + + YTF VL C +
Sbjct: 321 NMLETMEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCC--VV 378
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K VH L+IK G ++ +V AL+DMY+K G + + F+++ KDV++W +L++
Sbjct: 379 GSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVT 438
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++ +E+ +F M
Sbjct: 439 GYAQNNSHEESLKIFCDM 456
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 2/152 (1%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R V ++FD S + +S + Y + + LF M + +T VL
Sbjct: 111 RLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLR 170
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF--KDV 142
CS+L + G+ +H ++K G + V T L+DMY+K + E+ FK +EF K+
Sbjct: 171 VCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNH 230
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V W A+++ + ++G +A F+ M + VE
Sbjct: 231 VLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVE 262
>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 876
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYT------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ ++L Y T +VFDE+ D+ S NS L Y+ +R W LFC M
Sbjct: 137 LSVGNSLVDMYTKTGNVRDGRRVFDEMGDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQV 196
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
YT + V+ A + A G Q+HAL++K G ++E +V +L+ M SK G+L +
Sbjct: 197 EGYRPDYYTVSTVIAALANQGAVAIGMQIHALVVKLGFETERLVCNSLISMLSKSGMLRD 256
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F +E KD V+WN++++ + +G EAF F M
Sbjct: 257 ARVVFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNM 295
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 81/145 (55%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I D+ + ++ L Y ++ +F + + +TF ++ AC+A
Sbjct: 458 KVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINACTAPT 517
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+GKQ HA IK ++ V ++L+ +Y+K G + + E FK + +D+V+WN+++
Sbjct: 518 ASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVSWNSMI 577
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +HG AK+A VF+ M + +E
Sbjct: 578 SGYAQHGQAKKALEVFEEMQKRNLE 602
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 18 IADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY 77
+ D+ P+ + Q+FD+ DL N LF Y+R LF ++ + L+ +Y
Sbjct: 47 LRDSDPR---FAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSY 103
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T + VL C+ G+QVH +K G V +L+DMY+K G + + F E+
Sbjct: 104 TMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEM 163
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+DVV+WN+LL+ + + + + +F M E
Sbjct: 164 GDRDVVSWNSLLTGYSWNRFNDQVWELFCLMQVE 197
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + +T++ +L A+ E +HA +IK + V TAL+D +
Sbjct: 393 LFSLMRREGVKPNHFTYSTILTVQHAVFISE----IHAEVIKTNYEKSSSVGTALLDAFV 448
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G + ++V+ F+ IE KDV+ W+A+L+ + + G +EA +F +TRE ++
Sbjct: 449 KIGNISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIK 500
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + D S NS + + + + F M T TF V+ +C++L
Sbjct: 260 VFDNMENKDSVSWNSMIAGHVINGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKE 319
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
+ +H +K G + V TALM +K + ++ F + + VV+W A++S
Sbjct: 320 LGLVRVLHCKTLKSGLSTNQNVLTALMVALTKCKEIDDAFSLFSLMHGVQSVVSWTAMIS 379
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+L++G +A +F M RE V+
Sbjct: 380 GYLQNGDTDQAVNLFSLMRREGVK 403
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 4/129 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++F DL S NS + Y + +F M L + A TF V+ AC+
Sbjct: 559 HEIFKRQKERDLVSWNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHA 618
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKDVVT-WN 146
+G+ +MI P ++ + ++D+YS+ G+LG++++ + F T W
Sbjct: 619 GLVGKGQNYFNIMIN-DHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWR 677
Query: 147 ALLSSFLRH 155
+L++ H
Sbjct: 678 IVLAASRVH 686
>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 81/146 (55%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF I D+ + ++ + Y + + +F M + YTF+ ++ AC+A
Sbjct: 62 KVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPT 121
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+GKQ+HA IK ++ V +AL+ MYSK G + + E FK +D+V+WN+++
Sbjct: 122 AGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSII 181
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S + +HG ++A VF+ M R+ +E
Sbjct: 182 SGYAQHGYGRKALEVFEEMQRQNLEM 207
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA IK P V TAL+D Y K G + E+ + F+ IE KD+V W+A++ + + G
Sbjct: 27 EMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEASKVFQRIEEKDIVAWSAMICGYAQIG 86
Query: 157 LAKEAFGVFQAMTRERVE 174
+ A +F M +E+++
Sbjct: 87 DTEGAVRIFVQMAKEKIK 104
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF DL S NS + Y + +F M L + TF V+ AC+
Sbjct: 164 EVFKRQRERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTG 223
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNA 147
G++ +M+K EP ++ + ++D+Y + G+L +++E E+ F W
Sbjct: 224 LANEGQRYFDIMVK-DHHIEPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRT 282
Query: 148 LLSSFLRH 155
LL++ H
Sbjct: 283 LLAASCIH 290
>gi|410110019|gb|AFV61089.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
hermannioides]
Length = 371
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF Y+H
Sbjct: 194 ISNALVSMYLKSNSRNVEDALKIFEHINVKDLVSWNTILTGLSQNGLSENALRLFQYIHL 253
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 254 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 313
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 314 ARESFESSLKETSVTWNSIIFAYAQHGQGKIALDIFYLMTERRIKL 359
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L + AYT + ++ AC GK +H
Sbjct: 121 DLVTWNSMLAAYLEHNLEECGFNIFLEMVKQRLEMDAYTLSSIISACFEDTQQSLGKSLH 180
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+IK G D + AL+ MY K + ++++ F+ I KD+V+WN +L+ ++GL
Sbjct: 181 GFVIKKGLDQVTQISNALVSMYLKSNSRNVEDALKIFEHINVKDLVSWNTILTGLSQNGL 240
Query: 158 AKEAFGVFQ 166
++ A +FQ
Sbjct: 241 SENALRLFQ 249
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y + LF M + TF P+L
Sbjct: 3 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGDLERCVTLFVGMEMEGFRVDDATFAPLL 62
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H ++K G + E V A + Y++ + ++ F + ++D+
Sbjct: 63 TLLNDAESYDLARQLHGKIMKRGLEYENTVLNATITAYAECRCIEDAKRVFASSDGYRDL 122
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M ++R+E
Sbjct: 123 VTWNSMLAAYLEHNLEECGFNIFLEMVKQRLE 154
>gi|449440231|ref|XP_004137888.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
gi|449521725|ref|XP_004167880.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Cucumis sativus]
Length = 521
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 76/145 (52%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VF+E+ D+ S NS + Y +++ LF M + T TF +LGAC
Sbjct: 227 VAARKVFEEMPERDVVSWNSIISGYVNVKDYKGALDLFHSMKQWNIRATEVTFISILGAC 286
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L A E GK++H + + E + A++DMY+K G LG ++E F E+E K V WN
Sbjct: 287 AELGALEIGKKIHDSLKEKHYRIEGYLGNAIVDMYAKCGELGLALEVFNEMEMKPVSCWN 346
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++ HG + A +F +M E
Sbjct: 347 AMIMGLAVHGHCERALEMFDSMKAE 371
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 76/153 (49%), Gaps = 18/153 (11%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPVLGACS-A 88
+F E S D N+ + +Y+ + FP AL Y M ++ +T+ VL AC+ A
Sbjct: 55 LFQETSMDDSFICNTMIRAYSNTV-FPLK-ALLIYNRMQRMDVDSDHFTYNFVLRACARA 112
Query: 89 LPAPE-------------RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
+ E +G ++HA ++K G D + V+ +L+ +YS GL+G + F
Sbjct: 113 IKCTEMDDQCFGHHIISRKGSEIHARILKLGFDQDHHVQNSLLLVYSGSGLVGFARLIFN 172
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E+ K V+WN ++S++ R K A + ++M
Sbjct: 173 EMTVKTAVSWNIMMSAYNRVHDYKSADVLLESM 205
>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like [Glycine max]
Length = 635
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 77/147 (52%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R ++F E+S L + N+ + Y + LF M T + A + T VL
Sbjct: 212 RVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLL 271
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
CS L A + GKQVH L+ K S+ T+L+ MYSK G L ++ E F +I KDVV
Sbjct: 272 GCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVC 331
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WNA++S + +HG K+A +F M +E
Sbjct: 332 WNAMISGYAQHGAGKKALRLFDEMKKE 358
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 37/60 (61%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TA++ Y K+G + + F+E+ + +VTWNA+++ ++ +G A++ +F+ M V+
Sbjct: 201 TAMITGYMKFGRVELAERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVK 260
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F +I D+ N+ + Y + LF M L TF VL AC+
Sbjct: 319 ELFIQIPRKDVVCWNAMISGYAQHGAGKKALRLFDEMKKEGLKPDWITFVAVLLACNHAG 378
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+ G Q M + G +++P ++D+ + G L E+V+ K + FK
Sbjct: 379 LVDLGVQYFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFK 429
>gi|255559012|ref|XP_002520529.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540371|gb|EEF41942.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 78/146 (53%), Gaps = 4/146 (2%)
Query: 33 FDEISHG----DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
F++IS G D S N+ + Y+ FC M + + YTFT +LGA A
Sbjct: 315 FNKISSGVQLSDQISWNAVIAGYSNLGLGEDALKCFCEMRHANIKMDFYTFTSLLGAIGA 374
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A E G+++HAL++K G S V+ L+ MY++ G + +S F +E DVV+WNAL
Sbjct: 375 FLAIEEGREMHALIVKTGYASSVYVQNGLVSMYARCGAIDDSKRVFWLMEDHDVVSWNAL 434
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
L+ HG EA +F+ M + +++
Sbjct: 435 LTGCAHHGFGNEAVELFEQMRKTKIK 460
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 11/141 (7%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF+E+ + + NS +F Y N T A+ +T+++ + L CS L
Sbjct: 124 HEVFNEMPERNDVTWNSLIFGYL---NVMPTCAM--------RGVTSFSVSTCLVVCSQL 172
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G QVH L +K G D+ V TAL+DMYSK + +S F + K+VVTW A++
Sbjct: 173 EVRNFGAQVHGLSLKLGFDNNVFVGTALIDMYSKCDGVDDSWRVFDYMVDKNVVTWTAMV 232
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+++ ++ EA + + M R
Sbjct: 233 TAYAQNEQPDEAMILVREMMR 253
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 44/78 (56%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y V+ C+ + + G Q+H+ +I+ G S + +A++DMY+K + + E F E
Sbjct: 70 YFINKVVSFCAKFASYDLGIQLHSTIIRMGFTSNVHICSAVVDMYAKCSEIQSAHEVFNE 129
Query: 137 IEFKDVVTWNALLSSFLR 154
+ ++ VTWN+L+ +L
Sbjct: 130 MPERNDVTWNSLIFGYLN 147
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + ++ + + + +Y ++ L M + T+ +L + S
Sbjct: 215 RVFDYMVDKNVVTWTAMVTAYAQNEQPDEAMILVREMMRLGIKANYVTYNSLLSSFSGPK 274
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI----EFKDVVTWN 146
+ KQVH +I+ G + + L+ +YSK ++E F +I + D ++WN
Sbjct: 275 YMQYCKQVHCSIIRCGLECNLYIAATLVTVYSK---CTNNLEDFNKISSGVQLSDQISWN 331
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A+++ + GL ++A F M ++
Sbjct: 332 AVIAGYSNLGLGEDALKCFCEMRHANIK 359
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 80/146 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
YT ++FD++S ++ S S + + + F + FC M T + + VL AC+
Sbjct: 128 YTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACT 187
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+L A + G QVH L++K G E V + L DMYSK G L ++ +AF+E+ KD V W +
Sbjct: 188 SLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTS 247
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++ F+++G K+A + M + V
Sbjct: 248 MIDGFVKNGDFKKALTAYMKMVTDDV 273
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHA 100
+ SL + + Y + F + + +TFT ++ AC+ E G Q+H
Sbjct: 344 IVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHG 403
Query: 101 LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKE 160
++K +P V + L+DMY K GL S++ F EIE D + WN L+ F +HGL +
Sbjct: 404 QVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRN 463
Query: 161 AFGVFQAM 168
A F M
Sbjct: 464 AIETFNGM 471
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F+E+ D S + + ++ +F + M + + + + L ACSAL
Sbjct: 232 KAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALK 291
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK-EIEFKDVVTWNALL 149
A GK +HA ++K G + E + AL DMYSK G + + F+ + +V+ A++
Sbjct: 292 ASSFGKSLHATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAII 351
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++A F + R +E
Sbjct: 352 DGYVEMDQIEKALSTFVDLRRRGIE 376
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+GKQ+HA++I+GG + +++YSK G L +++ F ++ +++V+W ++++ F
Sbjct: 93 KGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSIITGFA 152
Query: 154 RHGLAKEAFGVFQAMTRE 171
+ +EA F M E
Sbjct: 153 HNSRFQEALSSFCQMRIE 170
>gi|302803540|ref|XP_002983523.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
gi|300148766|gb|EFJ15424.1| hypothetical protein SELMODRAFT_118230 [Selaginella moellendorffii]
Length = 506
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 86/148 (58%), Gaps = 2/148 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC--LNLTAYTFTPVLGAC 86
+ +VFD+ D+ NS + +Y++S + LF M S+ + A T+T VL AC
Sbjct: 11 SREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAAC 70
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
SA+ A E+GK+VH M+ G + + +L++MY+K G + E+ E F ++ + VV+W
Sbjct: 71 SAVEALEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWT 130
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S+++R G +EA +++ M E VE
Sbjct: 131 GIISAYVRKGHPREALDLYRKMGSEGVE 158
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C SI +A +VFD + + S + +Y R + L+
Sbjct: 101 LVNMYAK-CGSITEA--------REVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRK 151
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M S + TF VL ACS+L A E GK VHA M G + V AL+ +Y K G
Sbjct: 152 MGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGS 211
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + + F ++ ++VV+W A++SS+ H ++EA +++AM
Sbjct: 212 VDSARKVFDRMKIRNVVSWTAMISSYAHHRHSEEAIQLYKAM 253
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + ++ S + + SY R+ L+ M + A T VL AC++L
Sbjct: 216 RKVFDRMKIRNVVSWTAMISSYAHHRHSEEAIQLYKAMD---VAPNAVTLASVLSACASL 272
Query: 90 PAPERGKQVHALMIKG--GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
E G+ VH + G ++ V++ AL++MY+K G + + F + +D ++W+
Sbjct: 273 GNAEEGRAVHEKLASTTTGLATDEVLQNALLNMYAKCGDGDAARKIFDAMAVRDTMSWST 332
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
L++++ +HG EA + ++M E V+
Sbjct: 333 LIAAYTQHGRGGEAVEMCRSMELEGVQ 359
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
M++K G L ES E F + +KDV+ WN+++ ++ + G +EA +F++M
Sbjct: 1 MFAKCGSLKESREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSM 49
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 88/167 (52%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
+++ N + A A + V ++FD+I DL S +S + Y+++ +F +F
Sbjct: 249 MKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIF 308
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M + A V+ +C+ L A + GK VH + + ++ +++ +L+DMY K
Sbjct: 309 RQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKC 368
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G E+++ FKE++ KD ++WN+++ +G KE+ +FQAM E
Sbjct: 369 GSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTE 415
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V+ H+VFD+I N + +S A + + TF +L AC
Sbjct: 38 VFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKAC 97
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + A G+Q+H + K G S+ V +L+ +Y+ G L + F E+ KDVV+WN
Sbjct: 98 ARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN 157
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L+ + + K+ +F+ M E V+
Sbjct: 158 SLICGYSQCNRFKDILALFKLMQNEGVK 185
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 65/144 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFDE+ D+ S NS + Y++ F ALF M + + T V+ AC+
Sbjct: 140 YARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACT 199
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + + + + + L+D + + G L + + F ++ +++VT NA
Sbjct: 200 RLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNA 259
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
+++++ + A +F + ++
Sbjct: 260 MIAAYAKGQDIVSARKIFDQIPKK 283
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 4/149 (2%)
Query: 31 QVFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGAC 86
QVFDE+ GDL S NS + +Y + + +F M + A + VL AC
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++ A RGKQVH ++ G + V A++DMY+K G++ E+ + F+ ++ KDVV+WN
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 301
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
A+++ + + G +A G+F+ + E++E
Sbjct: 302 AMVTGYSQIGRFDDALGLFEKIREEKIEL 330
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF VL AC +P+ G VHA++ G + V L+ MY + G + + F E
Sbjct: 127 YTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDE 186
Query: 137 IEFK---DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + D+V+WN++++++++ G + A +F+ MT +
Sbjct: 187 MRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEA 133
A+T + L AC+ L A G+Q+HA +++ +S + V L+DMYSK G + +
Sbjct: 478 NAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVV 537
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + ++ V+W +L++ + HG +EA +F M +
Sbjct: 538 FDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 574
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIK---GGTDSEP----VVKTALMDMYSKYGLLGES 130
T +L C+ GK+ H IK +++P +V AL+DMYSK +
Sbjct: 369 TLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 428
Query: 131 VEAFKEIEFKD--VVTWNALLSSFLRHGLAKEAFGVFQAM 168
F I KD VVTW L+ +HG A EA +F M
Sbjct: 429 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 468
>gi|147826737|emb|CAN70653.1| hypothetical protein VITISV_010023 [Vitis vinifera]
Length = 1301
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 78/143 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+I DL+S N+ + Y ++ + L M + T VL ACS+L +
Sbjct: 255 LFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQMLKMGMQPDHSTLISVLTACSSLAS 314
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G++ H L++K G +S + AL+ MY K G + +S AF++I+ DVV+WNA++++
Sbjct: 315 LQEGRKTHVLVLKSGYESRISICNALITMYCKCGSILDSELAFRQIDHPDVVSWNAMIAA 374
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F RHG A F M RVE
Sbjct: 375 FARHGFYDRALASFGEMRSNRVE 397
Score = 43.9 bits (102), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA-- 88
QVFDE+ H D S NS + Y ++ F + LF M + ++ ++ C
Sbjct: 68 QVFDEMPHRDTVSWNSIITGYWKNGCFDESKRLFGLMPTK----NVVSWNSMIAGCIEDE 123
Query: 89 ---------LPAPERGKQVHALMIKGGTDSEPVVK----------------TALMDMYSK 123
P+R MI G + V + TA++D Y+K
Sbjct: 124 RIDEAWQYFQAMPQRNTASWNAMISGLVRYDRVEEASRLFEEMPRRNVISYTAMVDGYAK 183
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + ++ F + K+VV+W ++S ++ +G EA +F+ M
Sbjct: 184 IGEIEQARALFNCMPQKNVVSWTVMISGYVENGKFDEAENLFEQM 228
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 34/63 (53%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D V TA++ Y K G ++ F +I +D+ +WNA+++ + ++G +EA +
Sbjct: 230 DKNIVAMTAMITGYCKEGKTDKAKILFDQIPCRDLASWNAMITGYAQNGSGEEALKLHSQ 289
Query: 168 MTR 170
M +
Sbjct: 290 MLK 292
>gi|224122234|ref|XP_002318784.1| predicted protein [Populus trichocarpa]
gi|222859457|gb|EEE97004.1| predicted protein [Populus trichocarpa]
Length = 511
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 2/158 (1%)
Query: 18 IADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT 75
I D L + Y VF+++ D+ + N+ + Y R F LF +M+ + +
Sbjct: 82 IIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNKSNVEPD 141
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
YTF V+ C+ L A + + VH L+I+ + ++ +AL+DMYSK G + + E F
Sbjct: 142 KYTFASVINGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCGKIQTAKEIFD 201
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ +V WNA++S HGLA +A VF M E V
Sbjct: 202 GVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENV 239
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 41 LSSLNSQL--FSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV 98
LS ++S++ FSY S + A+ + Y+H C ++ V C ++ E +
Sbjct: 27 LSKIHSRIITFSYGTSPSLMAS-LMLKYVHCNCRSIVYKVIDQVF--CWSIDLVELNLII 83
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
LM T++ V K F ++ +DVVTWN ++ ++R
Sbjct: 84 DKLM---RTENYRVAKMV-----------------FNKMRARDVVTWNTMIGGYVRKARF 123
Query: 159 KEAFGVFQAMTRERVE 174
+EA +F+ M + VE
Sbjct: 124 EEALRLFRFMNKSNVE 139
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 4/149 (2%)
Query: 31 QVFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGAC 86
QVFDE+ GDL S NS + +Y + + +F M + A + VL AC
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++ A RGKQVH ++ G + V A++DMY+K G++ E+ + F+ ++ KDVV+WN
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 320
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
A+++ + + G +A G+F+ + E++E
Sbjct: 321 AMVTGYSQIGRFDDALGLFEKIREEKIEL 349
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF VL AC +P+ G VHA++ G + V L+ MY + G + + F E
Sbjct: 146 YTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDE 205
Query: 137 IEFK---DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + D+V+WN++++++++ G + A +F+ MT +
Sbjct: 206 MRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 243
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEA 133
A+T + L AC+ L A G+Q+HA +++ +S + V L+DMYSK G + +
Sbjct: 497 NAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVV 556
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + ++ V+W +L++ + HG +EA +F M +
Sbjct: 557 FDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 593
Score = 42.7 bits (99), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIK---GGTDSEP----VVKTALMDMYSKYGLLGES 130
T +L C++ GK+ H IK +++P +V AL+DMYSK +
Sbjct: 388 TLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAA 447
Query: 131 VEAFKEIEFKD--VVTWNALLSSFLRHGLAKEAFGVFQAM 168
F I KD VVTW L+ +HG A EA +F M
Sbjct: 448 RAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQM 487
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD ++ ++ S N+ + Y+ LF M +TF ++ A S L
Sbjct: 409 KVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLA 468
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q H ++K G D P V AL+DMY+K G + E+ + F ++DVV WN+++S
Sbjct: 469 SLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIS 528
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A+EA G+F+ M +E ++
Sbjct: 529 THAQHGEAEEALGMFREMMKEGIQ 552
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 71/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++S + + + YT+ + LF M T + Y + VL ACS L
Sbjct: 208 VFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEF 267
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+HA +++ GT+ + V L+D Y+K + + F ++ K++++W ++S
Sbjct: 268 LEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISG 327
Query: 152 FLRHGLAKEAFGVFQAMTR 170
++++ EA +F M R
Sbjct: 328 YMQNSFDWEAMKLFGEMNR 346
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ + L Y ++V FD++ ++ S + + Y ++ LF M+
Sbjct: 287 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 346
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ T VL +C + A E+G+QVHA IK +S+ VK L+DMY+K LL +
Sbjct: 347 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 406
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F + ++V+++NA++ + EA +F M
Sbjct: 407 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEM 445
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 2/174 (1%)
Query: 1 MLSFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
++S ++ F A I++ R VFD++ H +L + +S + Y++
Sbjct: 76 IVSGLQSDTFLANILINVCSK-SDRVDNARVVFDKMPHKNLITWSSMVSMYSQQGYSEEA 134
Query: 61 WALFCYMH-STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
+F + + + + V+ AC+ L E+G Q+H +++ G D + V T+L+D
Sbjct: 135 LMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLID 194
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
YSK G + E+ F ++ K VTW +++ + + G + + +F M V
Sbjct: 195 FYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSAVSLELFAQMRETNV 248
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 88/167 (52%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
+++ N + A A + V ++FD+I DL S +S + Y+++ +F +F
Sbjct: 714 MKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIF 773
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M + A V+ +C+ L A + GK VH + + ++ +++ +L+DMY K
Sbjct: 774 RQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKC 833
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G E+++ FKE++ KD ++WN+++ +G KE+ +FQAM E
Sbjct: 834 GSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTE 880
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 27/151 (17%)
Query: 29 THQVFDE-----------ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY 77
HQVFD SHG QLF + R T Y
Sbjct: 47 AHQVFDRRPTPWHALLKAYSHGPHPQDALQLFRHARWHAADDT----------------Y 90
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
FT L AC+ L P Q+H L+++ G + + V TAL+++Y G L +S AF+E+
Sbjct: 91 AFTFALKACAGLGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEM 150
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+ V+WN +++ F G + A +F+ M
Sbjct: 151 PVKNAVSWNVVITGFAGWGEVEYARLLFERM 181
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V+ H+VFD+I N + +S A + + TF +L AC
Sbjct: 503 VFAHKVFDQIEAPTTFLWNILIRGLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKAC 562
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + A G+Q+H + K G S+ V +L+ +Y+ G L + F E+ KDVV+WN
Sbjct: 563 ARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWN 622
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L+ + + K+ +F+ M E V+
Sbjct: 623 SLICGYSQCNRFKDILALFKLMQNEGVK 650
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +F+ + ++ S + + YTR+ ALF M + ++ + T V+ A S
Sbjct: 173 YARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPALS 232
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWN 146
+ G+ +H K G + V +L+D+Y+K G + S+ F E ++ +++V+W
Sbjct: 233 NVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWT 292
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
+++S F HGL+ +A +F M R
Sbjct: 293 SIISGFAMHGLSVKAVELFADMRR 316
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 65/144 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFDE+ D+ S NS + Y++ F ALF M + + T V+ AC+
Sbjct: 605 YARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACT 664
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + + + + + L+D + + G L + + F ++ +++VT NA
Sbjct: 665 RLGDYSMADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNA 724
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
+++++ + A +F + ++
Sbjct: 725 MIAAYAKGQDIVSARKIFDQIPKK 748
>gi|224058449|ref|XP_002299515.1| predicted protein [Populus trichocarpa]
gi|222846773|gb|EEE84320.1| predicted protein [Populus trichocarpa]
Length = 568
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 85/146 (58%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF EI +L LN+ + ++ R+ + AL+ + S + + TF+ +L ACSA
Sbjct: 227 SKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQTIWSLHRKVDSRTFSIILKACSA 286
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + G+ VH+L++K G D + V+++++D+Y K G +G++ +AF+ + WNA+
Sbjct: 287 ITDMQLGRAVHSLVLKTGFDQDSFVESSVIDIYCKCGSIGQAEKAFRSSSMNSLAAWNAM 346
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + HG +E F +F M++ +E
Sbjct: 347 MMGYAHHGCYQEVFDLFNKMSQFGIE 372
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 76/167 (45%), Gaps = 3/167 (1%)
Query: 2 LSFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
+ F+R ++ + A R V +VFDEI+ D+ S ++ T S A
Sbjct: 1 MGFLRGSSMHFSNAVMSMYARCGREVDAIKVFDEIAEPDVVSWTERIG--TASDGHEAV- 57
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LF + S L++ YT VL + GKQ+ AL K G V AL+ MY
Sbjct: 58 ELFRIVLSLGLDVNEYTLINVLSMIGGVKFLNAGKQIQALCHKTGYFQVVSVSNALVSMY 117
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K G + ++ F + +D V+WN+L+S+ +G +A VF M
Sbjct: 118 GKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQM 164
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTHQVFD------EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+++AL Y Q+ D + D S NS + + + + +F M
Sbjct: 107 VSVSNALVSMYGKCGQICDACRVFYNMIIRDSVSWNSLISACSENGFVNQALEVFYQMRE 166
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L T +T +L A S ++ Q+H+L++K G + + + L+ Y + + E
Sbjct: 167 LSLQPTIHTLASILEAVSNSNNTKQVIQIHSLVVKCGFMFDVSMISCLITAYGRCNSMDE 226
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S F EI+ ++V N ++++F+R G +A ++Q +
Sbjct: 227 SKRVFAEIDKVNLVHLNTMITTFVRAGYYTDALALYQTI 265
>gi|297745258|emb|CBI40338.3| unnamed protein product [Vitis vinifera]
Length = 487
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 85/149 (57%), Gaps = 4/149 (2%)
Query: 31 QVFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGAC 86
QVFDE+ GDL S NS + +Y + + +F M + A + VL AC
Sbjct: 182 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 241
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++ A RGKQVH ++ G + V A++DMY+K G++ E+ + F+ ++ KDVV+WN
Sbjct: 242 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWN 301
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
A+++ + + G +A G+F+ + E++E
Sbjct: 302 AMVTGYSQIGRFDDALGLFEKIREEKIEL 330
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 54/98 (55%), Gaps = 3/98 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF VL AC +P+ G VHA++ G + V L+ MY + G + + F E
Sbjct: 127 YTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDE 186
Query: 137 IEFK---DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + D+V+WN++++++++ G + A +F+ MT +
Sbjct: 187 MRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTED 224
>gi|410109995|gb|AFV61077.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
microcephala]
Length = 394
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 202 ISNALVSMYLKSNSRNVEDALKIFERINVKDLVSWNTILTGLSQNGLSENALRLFQNIHV 261
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 262 DHLVIDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGLEGNEYVASALIFMYSKCGIIED 321
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 322 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 367
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 119 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEECGFNIFLAMVRQRLEMDAYTLSSVISACFE 177
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +HA +IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 178 DTQQSLGKSLHASVIKKGLDEVTQISNALVSMYLKSNSRNVEDALKIFERINVKDLVSWN 237
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 238 TILTGLSQNGLSENALRLFQ 257
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N +LF M + TF P+L
Sbjct: 11 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVSLFVGMEMDGVRFDDATFAPLL 70
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 71 TLLHDAESYDLTRQIHGKIMKRGLEYENTVVNATITAYAECGCIEDAKRVFDSSDGYRDL 130
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F AM R+R+E
Sbjct: 131 VTWNSMLAAYLEHNLEECGFNIFLAMVRQRLEM 163
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+AL DMY+K + ++ + FK + ++ V+WNAL+ + G + +F M + V
Sbjct: 1 SALFDMYAKCRRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVSLFVGMEMDGVR 60
Query: 175 F 175
F
Sbjct: 61 F 61
>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 690
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA H VFD++ NS + SY + + M + +
Sbjct: 266 CGSIEDA--------HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKI 317
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + V+ C+ L + E KQ HA +++ G D++ V TAL+D YSK+G + ++ F
Sbjct: 318 DHFTISIVIRICARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVF 377
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ K+V++WNAL++ + HG +EA +F+ M RE
Sbjct: 378 NRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLRE 414
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 75/138 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D++S + + + S NF + LF M + + TFT ++ A + L
Sbjct: 173 KLFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLG 232
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H+ +K G + V AL+DMYSK G + ++ F ++ K V WN++++
Sbjct: 233 LVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIA 292
Query: 151 SFLRHGLAKEAFGVFQAM 168
S+ HG ++EA + M
Sbjct: 293 SYALHGYSEEALSFYYEM 310
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
++ T+ ++ AC L + K+V M+ G + + V ++ ++ K GL+ ++ +
Sbjct: 114 DVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMNRVLFVHVKCGLMLDARK 173
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ KD+ +W ++ F+ G EAFG+F M E
Sbjct: 174 LFDEMPEKDMASWMTMIGGFVDSGNFSEAFGLFLCMWEE 212
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 82/145 (56%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FD+I + DL S +S + +Y+++ +F + LF M + A VL AC
Sbjct: 594 VSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSAC 653
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L A + GK +H + + ++ +++ +L+DM++K G + E+++ F E+E KD ++WN
Sbjct: 654 AHLGALDLGKWIHDYVRRNNIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWN 713
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
+++ +G EA +F +M E
Sbjct: 714 SIILGLANNGFEDEALNIFYSMLTE 738
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD++ ++ S + YTR+ + ALF +M + ++ + T V+ A S
Sbjct: 24 YARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAIS 83
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWN 146
L G+ +H +K G S+ V +L+D+Y+K G + S++ F E ++ +++V+W
Sbjct: 84 NLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWT 143
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
+++S F HGL+ EA +F M R
Sbjct: 144 SIISGFAMHGLSVEALELFAEMRR 167
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V+ H+VF++I N+ L +S + + TF VL AC
Sbjct: 361 VFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKAC 420
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ AP+ G+Q+H+ +IK G + V +L+ +Y+ G L + F E+ KDVV+WN
Sbjct: 421 AKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWN 480
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L+ + + KE +F+ M E V+
Sbjct: 481 SLIGGYSQRNRFKEVLALFELMQAEEVQ 508
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 64/142 (45%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +FDE+ D+ S NS + Y++ F ALF M + + T V+ AC
Sbjct: 462 VCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISAC 521
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L + + + + + + L+D Y + G L + + F +++ K+ VT N
Sbjct: 522 THLGDWSMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLN 581
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++ ++ + G A +F +
Sbjct: 582 AMIHAYAKGGNLVSAKKIFDQI 603
>gi|302805647|ref|XP_002984574.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
gi|300147556|gb|EFJ14219.1| hypothetical protein SELMODRAFT_120669 [Selaginella moellendorffii]
Length = 369
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL AC++L A GK+VHA+ G DSE V TA++DMYSK G L E+VEAF IE D
Sbjct: 3 VLDACASLAALRDGKRVHAIARDHGVDSEVAVATAIVDMYSKCGCLDEAVEAFARIERHD 62
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V+W A+L++F +HG A FQ M +
Sbjct: 63 TVSWTAMLAAFAQHGHIDRALATFQRMQEQ 92
>gi|297745796|emb|CBI15852.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VFD + D+ S + + +Y + ++F M
Sbjct: 431 CQSLEDA--------RKVFDRMQERDMVSWTTLVSAYVQCYQPSEALSIFSQMREQGFMP 482
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ VL AC++L E G+QVH L+ K G D + ++++L +MY+K G + ++VE F
Sbjct: 483 NQFTFSSVLVACASLSLLEYGRQVHGLICKAGLDDDNCIESSLTNMYAKSGNIIDAVEVF 542
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++I DVV+W+A++ + +HG +A + Q M + ++
Sbjct: 543 EKIVCPDVVSWSAIIYGYAQHGFLDKAVELVQKMEQSGIQ 582
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%), Gaps = 2/100 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF+ VL A + +G++VH +++ G +S VV T+L+DMYSK G L ++ F
Sbjct: 280 YTFSSVLKAVGKIRDATKGREVHHCVMEYGMESNVVVGTSLIDMYSKCGHLSDARSVFDR 339
Query: 137 IEFKDVVT--WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+K V WNA++SS+ + G +EA +F M+ V+
Sbjct: 340 NFYKSKVNNPWNAMISSYTQCGYWQEALDLFIEMSLNDVK 379
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 1/128 (0%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + SYT+ + LF M + YT+ V A +AL G+QVH +++K
Sbjct: 351 NAMISSYTQCGYWQEALDLFIEMSLNDVKPDLYTYGGVFSAIAALKWLYFGRQVHGMVVK 410
Query: 105 GGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
G S + + A++D Y K L ++ + F ++ +D+V+W L+S++++ EA
Sbjct: 411 SGNGSRVLSLNNAIVDAYFKCQSLEDARKVFDRMQERDMVSWTTLVSAYVQCYQPSEALS 470
Query: 164 VFQAMTRE 171
+F M +
Sbjct: 471 IFSQMREQ 478
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
+V +VFD + H + S + ++ F + F M + + ++ V+ +
Sbjct: 128 FVEAWRVFDGMPHRNSFSWTVMIAGSKKNGLFLDGFRFFYDMLVDGILPDEFVYSAVIQS 187
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C L E G+ VH ++K G + +V T+L+ MY+K SV F I + V+W
Sbjct: 188 CIGLGCIELGEAVHGQIVKRGFWDDVIVGTSLLSMYAKLHNSEASVRVFNAIAEHNQVSW 247
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S +GL EAF F AM +
Sbjct: 248 GAVISGLSSNGLYLEAFHQFLAMITQ 273
>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Glycine max]
Length = 849
Score = 89.4 bits (220), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+EI D+ N+ Y++ + L+ + + L +TF V+ A S + +
Sbjct: 514 VFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAASNIAS 573
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q H +IK G D +P V +L+DMY+K G + ES +AF +D+ WN+++S+
Sbjct: 574 LRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWNSMIST 633
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A +A VF+ M E V+
Sbjct: 634 YAQHGDAAKALEVFERMIMEGVK 656
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ + + Y+ H+V F+ + D+ S + + ++ LF M
Sbjct: 290 VSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHGDAMDLFVEMVR 349
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
A+ T VL +C +L A ++G+QVHA IK D++ VK L+DMY+K L
Sbjct: 350 KGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTN 409
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F + +VV++NA++ + R EA +F+ M
Sbjct: 410 ARKVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREM 448
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC-YMHSTCLNLTAYTFTPVLGACSA 88
++FD + H +L + +S + YT+ LFC +M S Y V+ AC+
Sbjct: 107 QKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQ 166
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + Q+H ++KGG + V T+L+D Y+K G + E+ F ++ K VTW A+
Sbjct: 167 LGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAI 226
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
++ + + G ++ + +F M V
Sbjct: 227 IAGYAKLGRSEVSLKLFNQMREGDV 251
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD ++ ++ S N+ + Y+R LF M + T TF +LG S+L
Sbjct: 412 KVFDLVAAINVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLF 471
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E Q+H L+IK G + +AL+D+YSK +G++ F+EI +D+V WNA+ S
Sbjct: 472 LLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFS 531
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + +E+ +++ + R++
Sbjct: 532 GYSQQLENEESLKLYKDLQMSRLK 555
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + + + Y + + LF M + Y + VL ACS L
Sbjct: 211 IFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEF 270
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+H +++ G D + V ++D Y K + + F + KDVV+W +++
Sbjct: 271 LEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKCHKVKTGRKLFNRLVDKDVVSWTTMIAG 330
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+++ +A +F M R+
Sbjct: 331 CMQNSFHGDAMDLFVEMVRK 350
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 83 LGACSALPAPE-----RGKQVHA-LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
LG LP+P K++HA +++ G + + L+ YSK L ++ + F
Sbjct: 53 LGKLLQLPSPNILTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDT 112
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ +++VTW++++S + +HG + EA +F R
Sbjct: 113 MPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMR 146
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 17/172 (9%)
Query: 20 DALPKRYVYT-----------------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
D +P+R V+T +F + D + NS + + +
Sbjct: 79 DKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALY 138
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
F MH L YTF L ACS L RG Q+H+L+ K S+ + +AL+DMYS
Sbjct: 139 YFAMMHKEGFVLNEYTFASGLSACSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYS 198
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G + ++ + F E+ ++VV+WN+L++ + ++G A EA VFQ M VE
Sbjct: 199 KCGNVNDAQQVFDEMGDRNVVSWNSLITCYEQNGPAVEALKVFQVMLESWVE 250
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N A+T + A+ +F +++ ++ S N+ + YT++ +LFC
Sbjct: 317 IRNVIAETSMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCL 376
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK------GGTDSEPVVKTALMDM 120
+ + T YTF +L AC+ L G Q H ++K G + + V +L+DM
Sbjct: 377 LKRESVCPTHYTFANILKACADLADLHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDM 436
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y K G + E F+++ +D V+WNA++ F ++G EA +F+ M
Sbjct: 437 YVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREM 484
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 85/178 (47%), Gaps = 36/178 (20%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACS 87
QVFDE+ ++ S NS + Y +N PA AL F M + + T V+ AC+
Sbjct: 207 QQVFDEMGDRNVVSWNSLITCY--EQNGPAVEALKVFQVMLESWVEPDEVTLASVISACA 264
Query: 88 ALPAPERGKQVHALMIK-GGTDSEPVVKTALMDMYSKYGLLGE----------------- 129
+L A + G++VHA ++K ++ ++ A +DMY+K + E
Sbjct: 265 SLSAIKVGQEVHARVVKMDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 130 ----------SVEA----FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S +A F ++ ++VV+WNAL++ + ++G +EA +F + RE V
Sbjct: 325 SMVSGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 73 NLTAYT----FTPVLGACSALPAPERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
+L+++T F +L +C L + VHA +IK G +E ++ L+D Y+K G L
Sbjct: 12 DLSSFTVSSPFAKLLDSCIKLKLSAIDVRCVHASVIKSGFSNEVFIQNRLIDAYAKCGSL 71
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F ++ ++V TWN++++ + G EA +F++M
Sbjct: 72 EDGRQLFDKMPQRNVFTWNSVVTGLTKLGFLDEADSLFRSM 112
>gi|9279602|dbj|BAB01060.1| unnamed protein product [Arabidopsis thaliana]
Length = 598
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y + +FDE+ D S N+ + YT W LF M + ++ Y+F+ +L +
Sbjct: 53 YANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIA 112
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
++ + G+QVH L+IKGG + V ++L+DMY+K + ++ EAFKEI + V+WNA
Sbjct: 113 SVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNA 172
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L++ F++ K AF + M
Sbjct: 173 LIAGFVQVRDIKTAFWLLGLM 193
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 84/163 (51%), Gaps = 10/163 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S++DA +VFD + DL S NS + + + F Y+ S+ +
Sbjct: 251 CGSVSDA--------KRVFDGLGGSKDLISWNSMIAGFAQKGLSEDAVKFFSYLRSSEIK 302
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ Y F+ +L +CS L + G+Q+HAL K G S V ++L+ MYSK G++ + +
Sbjct: 303 VDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKC 362
Query: 134 FKEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
F++I K V WNA++ + +HGL + + +F M + V+
Sbjct: 363 FQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 405
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H IK G+ S+ V ++D Y K+G LG + F E+ +D V+WN ++S + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 159 KEAFGVFQAMTR 170
++A+ +F M R
Sbjct: 83 EDAWCLFTCMKR 94
>gi|125544034|gb|EAY90173.1| hypothetical protein OsI_11738 [Oryza sativa Indica Group]
Length = 408
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLG 84
Y ++F+ + D+ N+ + Y+++ ++ +F MH T TF VLG
Sbjct: 22 YEDAEEIFNTMDEKDVVVYNAMVEGYSKTEETAESSMEVFKSMHRARFRPTVSTFVSVLG 81
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS L +PE G+QVH +IK S+ +AL+DMYSK G + + F + ++V+T
Sbjct: 82 ACSLLSSPEIGEQVHCQVIKSSLSSDIKAGSALLDMYSKCGRVDDGRRIFDRMAERNVIT 141
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
W +++ + ++GL+ EA +F+ M
Sbjct: 142 WTSMIDGYGKNGLSDEALQLFEQM 165
>gi|255549315|ref|XP_002515711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545148|gb|EEF46658.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 462
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA ++F+ ++ D S NS + Y R+R+ + +FC M
Sbjct: 293 CNSMVDA--------RKLFEHMAWKDTVSWNSMISGYARNRDAFESLRVFCRMVLEGTKP 344
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF VLGAC + A E G+ VH+ + K G + V TAL+DMY+K G L + F
Sbjct: 345 DKITFITVLGACEQITAMEFGRSVHSYLSKKGFSATIFVATALIDMYAKCGNLACAHLVF 404
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+E+ K++ W+A++S + HG+ +EA +F M + +
Sbjct: 405 EEMPEKNLFCWSAMISGYGIHGMGREAISLFHEMIKNHI 443
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 74/141 (52%), Gaps = 1/141 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + DL+S N+ + Y ++ A+F M L++ T +L C+ L A
Sbjct: 200 VFDRMPVRDLTSWNTMISGYLKNGKPREVLAIFNLMKQIGLSVDDMTLIGLLCTCAELFA 259
Query: 92 PERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++GK++H +++ + +L++MY K + ++ + F+ + +KD V+WN+++S
Sbjct: 260 EKQGKEIHGYVVRNRHSVFNHFLINSLIEMYCKCNSMVDARKLFEHMAWKDTVSWNSMIS 319
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ R+ A E+ VF M E
Sbjct: 320 GYARNRDAFESLRVFCRMVLE 340
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 57 FPATWALFCYMHSTCLNLTA--YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK 114
FP ALF Y + A +T+ V+ AC L E G +VH ++ G + + V
Sbjct: 123 FPVK-ALFLYQDMSSFGQKADKFTYPFVIKACGDLRDVEFGWRVHCEVVITGFNLDIYVG 181
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+L+ MYSK+G + + F + +D+ +WN ++S +L++G +E +F M +
Sbjct: 182 NSLLAMYSKFGNMKMARMVFDRMPVRDLTSWNTMISGYLKNGKPREVLAIFNLMKQ 237
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 1/97 (1%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVE 132
LT+ VL +++ + +G+Q+HA +I G + + T L Y+ GL+ +
Sbjct: 39 LTSLQCGTVLQTLTSIKSFTKGQQLHAYIITSGNLQNNTYLSTKLAAFYASCGLMAAAQI 98
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F I K+ WN ++ + +G +A ++Q M+
Sbjct: 99 IFDGIVLKNSFLWNFMIRGYACNGFPVKALFLYQDMS 135
>gi|218184996|gb|EEC67423.1| hypothetical protein OsI_34621 [Oryza sativa Indica Group]
Length = 799
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Query: 1 MLSFIRMTNFPAKTCISIADALPKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNFP 58
+L F M F A ++ D K + ++ D I + S N+ L ++ ++
Sbjct: 412 ILHFNEMLRFDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESE 471
Query: 59 ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
A F M L +TF VL C+ L E GKQ+H +IK + + + L+
Sbjct: 472 AAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISSTLV 531
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
DMY+K G + +S+ F+++E +D V+WNA++ + HGL EA +F+ M +E V
Sbjct: 532 DMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENV 586
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 20 DALPKR---------YVYTHQ--------VFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
DA+P+R Y+H +FD + D+ S N+ + Y + F +
Sbjct: 76 DAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVD 135
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M ++ TF +L +CSAL G QVHAL +K G + + +AL+DMY
Sbjct: 136 LFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 195
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
K L +++ F + ++ V+W + ++ +++ +F M R
Sbjct: 196 KCRSLDDALCFFYGMPERNWVSWGSAIAGCVQNEQYVRGLELFIEMQR 243
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S S + ++ + LF M L ++ ++ +C+A+ G+Q+HA
Sbjct: 217 SWGSAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHA 276
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
IK S+ VV TA++D+Y+K L ++ AF + V T NA++
Sbjct: 277 IKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMM 323
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 11/105 (10%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+M + + + + V AC+ G+QVH L IK +++D+Y K
Sbjct: 327 FMIRSSIRFDVVSLSGVFSACAETKGYFPGQQVHCLAIK-----------SVLDLYGKCK 375
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
L E+ F+ ++ KD V+WNA++++ ++G + F M R
Sbjct: 376 ALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 420
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ YS G + +V F + DVV+WNAL+S + + G+ +E+ +F M R V
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
>gi|334185633|ref|NP_189226.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546761|sp|Q9LU94.2|PP255_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g25970
gi|332643575|gb|AEE77096.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 701
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 5 IRMTNFPAKTCISIADALPKRYV-----------YTHQVFDEISHGDLSSLNSQLFSYTR 53
+ +T+ A C SI+D + Y + +FDE+ D S N+ + YT
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 54 SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV 113
W LF M + ++ Y+F+ +L +++ + G+QVH L+IKGG + V
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++L+DMY+K + ++ EAFKEI + V+WNAL++ F++ K AF + M
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM 193
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + DL S NS + + + F Y+ S+ + + Y F+ +L +CS L
Sbjct: 364 LFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLAT 423
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
+ G+Q+HAL K G S V ++L+ MYSK G++ + + F++I K V WNA++
Sbjct: 424 LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMIL 483
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ +HGL + + +F M + V+
Sbjct: 484 GYAQHGLGQVSLDLFSQMCNQNVKL 508
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S++DA +VFD + DL S NS + +++ + + LF M +
Sbjct: 251 CGSVSDA--------KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVE 302
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY--GLLGESV 131
YT+T +L ACS GK +H ++IK G + AL+ MY ++ G + +++
Sbjct: 303 TDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F+ ++ KD+++WN++++ F + GL+++A F + ++
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIK 405
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H IK G+ S+ V ++D Y K+G LG + F E+ +D V+WN ++S + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 159 KEAFGVFQAMTR 170
++A+ +F M R
Sbjct: 83 EDAWCLFTCMKR 94
>gi|410110047|gb|AFV61103.1| pentatricopeptide repeat-containing protein 81, partial [Neosparton
ephedroides]
Length = 359
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 4/147 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACSA 88
+VF I DL S N+ L S+N+ + AL F MH L YTF+ VL +CS
Sbjct: 200 KVFKHIDKKDLVSWNTILTGL--SQNWLSENALRFFQQMHLDYLIFDQYTFSAVLRSCSD 257
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + G+Q+H L++K G + V +AL+ MYSK G++ ++ E+F+ VTWN++
Sbjct: 258 LATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIEDARESFEASHKDSSVTWNSI 317
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ ++ +HG K A +F MT RV+
Sbjct: 318 IFAYAQHGQGKIALDLFYFMTERRVKL 344
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y +F +M + + TF P+L E +Q+H +
Sbjct: 7 SWNALIGGYAEIGKLKRCIEVFMFMEEEGVRVDDATFAPLLALLYDAELYELTRQLHGKI 66
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V A + Y++ G + ++ F + ++D+VTWN++L+++L H L +
Sbjct: 67 MKRGLEHENTVLNATITAYAECGCIQDAKRVFDIADGYRDLVTWNSMLAAYLEHDLEESG 126
Query: 162 FGVFQAMTRERVE 174
F VF M R+R+E
Sbjct: 127 FDVFLEMVRQRLE 139
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD I+ G DL + NS L +Y + + +F M L + AYT + V+ +C
Sbjct: 96 RVFD-IADGYRDLVTWNSMLAAYLEHDLEESGFDVFLEMVRQRLEMDAYTLSSVISSCFR 154
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G + AL+ MY K + ++++ FK I+ KD+V+WN
Sbjct: 155 DSQQTLGKSLHGFVIKKGLEQVTQASNALISMYLKSNSQNVEDALKVFKHIDKKDLVSWN 214
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++ L++ A FQ M
Sbjct: 215 TILTGLSQNWLSENALRFFQQM 236
>gi|224136754|ref|XP_002322407.1| predicted protein [Populus trichocarpa]
gi|222869403|gb|EEF06534.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 89.0 bits (219), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 2/149 (1%)
Query: 29 THQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
HQVFDE+ S+ NS + YT S + AL+ M + +TF VL AC
Sbjct: 63 AHQVFDEMFKRGESAFPWNSLIAGYTESGLYEDAMALYFQMEEEGVEPDQFTFPRVLKAC 122
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G+ VH +++ G ++ V AL+DMY+K G + ++ F +I+ KD ++WN
Sbjct: 123 GGIGLIRIGEAVHRDLVRLGFANDGFVLNALVDMYAKCGDIVKARRIFDKIDCKDSISWN 182
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++L+ ++RHGL EA F +M + +E
Sbjct: 183 SMLTGYIRHGLIAEALHTFHSMVHDGMEL 211
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 6/145 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FD+I D S NS L Y R F M + L + + +L
Sbjct: 164 VKARRIFDKIDCKDSISWNSMLTGYIRHGLIAEALHTFHSMVHDGMELDSVAVSTILANV 223
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+ E Q+H +++ G + + + +L+ +YS L + F + KD+V+WN
Sbjct: 224 SSF---EVAVQIHGWIVRRGMEWDFSIANSLIAVYSNGRKLDRARWLFDHMPKKDIVSWN 280
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
+++S+ H +A F+ M R+
Sbjct: 281 SIISA---HCKDLKALTYFELMERD 302
>gi|255541017|ref|XP_002511573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550688|gb|EEF52175.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 954
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VFD I + ++ S N + Y R+ F +W F MH + + T+ VL AC+
Sbjct: 103 YALKVFDTIPNKNVISWNVIISGYNRNSLFEDSWRFFSMMHFSGFDPNDITYGCVLSACA 162
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
AL P G+QV++L K G S V+ ++D+ ++ G G+++ F ++ ++VV WN+
Sbjct: 163 ALETPNLGEQVYSLATKNGFYSNGHVRAGMIDLLARNGRFGDALRVFYDVSCENVVCWNS 222
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++S ++ G A +F M+R V
Sbjct: 223 IISGAVKSGEYWIALDIFYQMSRRFV 248
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 80/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD ++ D S +S + Y ++ LF M + + ++ + VLGA + L
Sbjct: 608 KMFDLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEMLISNFTIDSFAVSSVLGAIAGLN 667
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+HA ++K G DS+ V ++L+ +YSK G + + +AF +I+ D+++W +++
Sbjct: 668 RLDFGTQLHAHLVKLGLDSDVSVGSSLVTVYSKCGSIEDCWKAFNQIDDADLISWTTMIA 727
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
S +HG EA +++ M RE +
Sbjct: 728 SCAQHGKGVEALKIYEQMRREGI 750
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++S ++ NS + +S + +F M + ++TF+ +L AC++L
Sbjct: 207 RVFYDVSCENVVCWNSIISGAVKSGEYWIALDIFYQMSRRFVVPNSFTFSSILTACASLE 266
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK + +IK + V TA+++MY+K G + ++V+ F + ++VV+W A++S
Sbjct: 267 EVELGKGIQGWVIKCCA-KDIFVGTAIVNMYAKCGDIVDAVKEFSRMPVRNVVSWTAIVS 325
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F++ + A F+ M + + E
Sbjct: 326 GFIKRDDSISALKFFKEMRKMKEE 349
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+++H ++K G + V ++L MYSK G +G+S + F++I KD ++W +++S F
Sbjct: 470 GREIHCYILKTGFVLDLSVGSSLFTMYSKCGSIGDSYKVFEQIPVKDNISWTSMISGFTE 529
Query: 155 HGLAKEAFGVFQAMTRER 172
HG A +AF + + M ER
Sbjct: 530 HGHAYQAFELLRKMLTER 547
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI D +++VF++I D S S + +T + + L M +
Sbjct: 499 CGSIGD--------SYKVFEQIPVKDNISWTSMISGFTEHGHAYQAFELLRKMLTERSKP 550
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF+ +L A S++ + ++GK++H + E +V AL++MYSK G L + + F
Sbjct: 551 DQTTFSAILSAASSIHSLQKGKEIHGYAYRARLGDEALVGGALVNMYSKCGALESARKMF 610
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ KD V+ ++L+S + ++G +EA +F M
Sbjct: 611 DLLAVKDQVSCSSLVSGYAQNGWLEEALLLFHEM 644
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T V+ AC+ + Q+H ++K G +PVV AL++MY+K + S F+E
Sbjct: 353 FTVTTVISACAKPHFIKEAIQIHCWILKTGYYLDPVVGAALINMYAKLHAISSSEMVFRE 412
Query: 137 IE-FKDVVTWNALLSSFLRHGLAKEA 161
+E K+ W ++SSF ++ ++ A
Sbjct: 413 MEGVKNPGIWTIMISSFAKNQDSQSA 438
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 87 SALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
SA E K +H +IK +S VV +L+D Y K G L +++ F I K+V++W
Sbjct: 60 SADHTVEETKVIHTHLIKTALFNSNTVVANSLLDWYCKSGALFYALKVFDTIPNKNVISW 119
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
N ++S + R+ L ++++ F M
Sbjct: 120 NVIISGYNRNSLFEDSWRFFSMM 142
>gi|410110049|gb|AFV61104.1| pentatricopeptide repeat-containing protein 81, partial [Phyla
nodiflora]
Length = 346
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 90/164 (54%), Gaps = 8/164 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 183 ISNALVSMYLKSNSRNVEDALKIFEHINTKDLVSWNTILTGLSQNGLSENALRLFQSIHL 242
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L+IK G ++ V +AL+ MYSK G++ +
Sbjct: 243 DHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVIKSGFENNEYVASALIFMYSKCGIIED 302
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ E+F+ + VTWN+++ ++ +HG K A +F MT R+
Sbjct: 303 AWESFESSHKETSVTWNSIVFAYAQHGQGKIALDLFYLMTERRI 346
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L SY + +F M L + AYT + V+ C
Sbjct: 100 RVFDR-SDGYRDLVTWNSMLASYLEHNLEGYGFNIFXEMXRQRLEMDAYTLSSVISVCFE 158
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +HAL+IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 159 DTQQSLGKSLHALVIKKGLDEVTQISNALVSMYLKSNSRNVEDALKIFEHINTKDLVSWN 218
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ++
Sbjct: 219 TILTGLSQNGLSENALRLFQSI 240
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N LF M + + TF P+L + + +Q+H +
Sbjct: 11 SWNALIGGYAEVGNLXHCITLFVGMEMEGVRVDDATFXPLLTLLYDAESYDLTRQLHGKI 70
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V A + Y++ G + ++ F + ++D+VTWN++L+S+L H L
Sbjct: 71 MKRGLEHENTVLNATITAYAECGCIEDAKRVFDRSDGYRDLVTWNSMLASYLEHNLEGYG 130
Query: 162 FGVFQAMTRERVE 174
F +F M R+R+E
Sbjct: 131 FNIFXEMXRQRLE 143
>gi|302763041|ref|XP_002964942.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
gi|300167175|gb|EFJ33780.1| hypothetical protein SELMODRAFT_20633 [Selaginella moellendorffii]
Length = 604
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL S NS + +Y++ + LF M + + T+ +LGACSA+ E GK+VH
Sbjct: 3 DLISWNSMVVAYSQHGHGEEMLELFRKMD---VEPDSITYASILGACSAMELLELGKEVH 59
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A + + S+P + AL++MYSK G+L + F I+ D WNA++S ++HG A+
Sbjct: 60 ARVSRSRFKSDPALAAALINMYSKCGVLESARRVFDGIQSVDPSPWNAMISGLVQHGRAR 119
Query: 160 EAFGVFQAMTRERVEF 175
EA G+F+ M E V
Sbjct: 120 EALGLFERMKAESVRI 135
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + +++ N+ + SY + + LF M + A TF V+GACS+L A
Sbjct: 143 FDRMEKKSVTAWNAMISSYAQHGQASKSLLLFHQMSLEGVKPDARTFVSVIGACSSLQAL 202
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLSS 151
E+G+ V G + +TAL+ +Y+K G L + + F ++++ K+VV+WN+++++
Sbjct: 203 EKGRAVEEQATSMGIEEG---RTALLSLYAKCGNLEAARDIFDKLKYRKNVVSWNSMIAA 259
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + G +EA +++ M E V+
Sbjct: 260 YAQSGRGREALELYELMKEEGVQ 282
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 32 VFDEISH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD++ + ++ S NS + +Y +S L+ M + T+ LGAC++
Sbjct: 240 IFDKLKYRKNVVSWNSMIAAYAQSGRGREALELYELMKEEGVQPDDITYAGALGACTSYG 299
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+G ++H+ + + ++ + TA+++MY+K G L ++ F+++ K+ VTW+A++
Sbjct: 300 GSAKGVEIHSRITESKIRTDVFLDTAIVNMYAKCGELETAMSYFEKMRRKNAVTWSAMVG 359
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+F++HG +EA ++ M E
Sbjct: 360 AFIQHGYDREALDLYLRMVSE 380
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMY 121
L+ M S + T L ACS + A + GK +H+ + T + ++ +L++MY
Sbjct: 373 LYLRMVSEGFQPSEITLAGALAACSRIGALQEGKAIHSRIQATETLQNCLFLQNSLLNMY 432
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+K G L + F ++ +D +WN ++ HG E + M ++ V+
Sbjct: 433 AKCGCLAIANTMFSNLQRRDSFSWNTIIVGHAHHGDVDEVLSLHGEMVQDGVD 485
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA +VFD + DL + S + R F LF M +
Sbjct: 259 CGDIGDAT--------KVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
F +L AC+ A E+GK+VHA M + G D+E V TA++ MY+K G + +++E F
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++VV+W A+++ F +HG EAF F M +E
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DAL +VFD + ++ S + + + + + F M + +
Sbjct: 360 CGSMEDAL--------EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF +LGACS+ A +RG+Q+ +I+ G S+ V+TAL+ MY+K G L ++ F
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVF 471
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++I ++VV WNA+++++++H A FQA+ +E ++
Sbjct: 472 EKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ Q+FD++ D+ S N L Y + + + L M + TF +L AC
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ ++G++++ L++K G D++ V TAL++M+ K G +G++ + F + +D+VTW
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT 281
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++++ RHG K+A +FQ M E V+
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEGVQ 309
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA H+VF++IS ++ + N+ + +Y + + A F + +
Sbjct: 461 CGSLKDA--------HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TFT +L C + + E GK VH L++K G +S+ V AL+ M+ G L + F
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLF 572
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ +D+V+WN +++ F++HG + AF F+ M ++
Sbjct: 573 NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ DL S N+ + + + + F M + + TFT +L AC++
Sbjct: 570 NLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+++HAL+ + D + +V T L+ MY+K G + ++ + F ++ K+V +W ++++
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIT 689
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HG KEA +F M +E V+
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVK 713
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +I D N+ L +++ F + + S+ + + T++ +L C
Sbjct: 68 VFADIK--DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G++++ + K G + + L++MY+K G + + F ++ KDV +WN LL
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+++HGL +EAF + + M ++ V+
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVK 208
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA HQVF ++ ++ S S + Y + LF M +
Sbjct: 663 CGSIEDA--------HQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKP 714
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TF L AC+ E G +H + EP ++ ++D++ + GLL E+VE
Sbjct: 715 DWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVE 772
Query: 133 AFKEIEFK-DVVTWNALLSSFLRH 155
+++ + D W ALL + H
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVH 796
>gi|410110037|gb|AFV61098.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
rubella]
Length = 361
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALISMYLKSNSRNVEDALKIFEHINDKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 GHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 315 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 360
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVRQMLEMDAYTLSSVISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +HAL+IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSLHALVIKKGLDQVTQISNALISMYLKSNSRNVEDALKIFEHINDKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 231 TILTGLSQNGLSENALRLFQNI 252
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVTLFVGMEMEGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 64 TLLYDAESYDLTRQLHGKIMKRGLEHENTVLNATITAYAECGCIEDAKRVFDSSDGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M R+ +E
Sbjct: 124 VTWNSMLAAYLEHNLEEYGFNIFLEMVRQMLEM 156
>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Brachypodium distachyon]
Length = 1054
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 84/143 (58%), Gaps = 3/143 (2%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATW-ALFCYMHSTCLNLTAYTFTPVLGACSA 88
Q+F +S D S NS + Y + + T ++ MHS + L TF+ VL AC++
Sbjct: 634 QLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQM-LDCCTFSIVLNACAS 692
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A ERG ++HA I+ +S+ VV++AL+DMYSK G + + + F + K+ +WN++
Sbjct: 693 VAALERGMEMHAFGIRSQLESDVVVESALLDMYSKCGRIDYASKVFNSMSQKNEFSWNSM 752
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
+S + RHGL ++A +F+ M R
Sbjct: 753 ISGYARHGLGEKALEIFEEMQRN 775
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 77/152 (50%), Gaps = 8/152 (5%)
Query: 17 SIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHS 69
S+++AL K Y + ++F+ ++ D+ S NS + S A + +F M
Sbjct: 512 SVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMR 571
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ L TF +L A S L E GKQVHA+++K G + V ALM Y+K G +
Sbjct: 572 SGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDS 631
Query: 130 SVEAFKEIE-FKDVVTWNALLSSFLRHGLAKE 160
+ F + +D V+WN+++S ++ +G +E
Sbjct: 632 CEQLFSSMSGRRDAVSWNSMISGYIYNGHLQE 663
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
+C M C++ + + L +C++L G+QVH +K G D + V AL+ MY
Sbjct: 464 YCMMRQGCISPSNFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGD 523
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFL-RHGLAKEAFGVFQAMTR 170
G ES E F + D+V+WN+++ + H E+ VF M R
Sbjct: 524 CGARSESWEIFNSMAEHDIVSWNSIMGVMVSSHAPTAESVEVFSNMMR 571
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 8/148 (5%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTAYTFTPVLGA 85
QVFD DL + N+ + Y + +T+ LF M + L +TF ++ A
Sbjct: 219 QQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITA 278
Query: 86 CSALPAPERG--KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
S L + G QV A ++K G+ S+ V +AL+ ++++G+L E+ + F ++ ++ V
Sbjct: 279 TS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSAFARHGMLDEAKDIFINLKERNAV 337
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRE 171
T N L+ ++ ++EA G+F TR+
Sbjct: 338 TLNGLIVGLVKQHCSEEAVGIFMG-TRD 364
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
Query: 75 TAYTFTPVLGACSALPAPER---GKQVHALMIKGGTDSEPVVKTALMDMYSK--YGLLGE 129
T +TF VL AC P+ QVH L+ K S V AL+ MY GL +
Sbjct: 159 TPFTFGSVLRACQD-AGPDLLAFAVQVHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQ 217
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + F +D++TWNAL+S + + G F +F AM +
Sbjct: 218 AQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMAMLHD 259
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
APER +H ++K G + + L+++Y+K L + + F + ++ V+W L+S
Sbjct: 74 APER---LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGMLERNAVSWTCLVS 130
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ G+ EAF VF+AM E EF
Sbjct: 131 GYVLSGITDEAFRVFKAMLWEGSEF 155
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
Query: 78 TFTPVLGACSALPAPE----RGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVE 132
TF +L A + PE RG++VH +++ G D + + L++MY+K G + ++
Sbjct: 372 TFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKASR 431
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
F+ + +D V+WN ++S ++G + A
Sbjct: 432 VFRLLCARDRVSWNTIISVLDQNGFCEGAM 461
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA +VFD + DL + S + R F LF M +
Sbjct: 259 CGDIGDAT--------KVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQP 310
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
F +L AC+ A E+GK+VHA M + G D+E V TA++ MY+K G + +++E F
Sbjct: 311 DKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVF 370
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++VV+W A+++ F +HG EAF F M +E
Sbjct: 371 DLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIE 410
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 87/160 (54%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DAL +VFD + ++ S + + + + + F M + +
Sbjct: 360 CGSMEDAL--------EVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEP 411
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF +LGACS+ A +RG+Q+ +I+ G S+ V+TAL+ MY+K G L ++ F
Sbjct: 412 NRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVF 471
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++I ++VV WNA+++++++H A FQA+ +E ++
Sbjct: 472 EKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIK 511
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ Q+FD++ D+ S N L Y + + + L M + TF +L AC
Sbjct: 162 ISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNAC 221
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ ++G++++ L++K G D++ V TAL++M+ K G +G++ + F + +D+VTW
Sbjct: 222 ADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWT 281
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++++ RHG K+A +FQ M E V+
Sbjct: 282 SMITGLARHGRFKQACNLFQRMEEEGVQ 309
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA H+VF++IS ++ + N+ + +Y + + A F + +
Sbjct: 461 CGSLKDA--------HRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKP 512
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TFT +L C + + E GK VH L++K G +S+ V AL+ M+ G L + F
Sbjct: 513 NSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLF 572
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ +D+V+WN +++ F++HG + AF F+ M ++
Sbjct: 573 NDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIK 612
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ DL S N+ + + + + F M + + TFT +L AC++
Sbjct: 570 NLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPE 629
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+++HAL+ + D + +V T L+ MY+K G + ++ + F ++ K+V +W ++++
Sbjct: 630 ALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIA 689
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HG KEA +F M +E V+
Sbjct: 690 GYAQHGRGKEALELFYQMQQEGVK 713
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +I D N+ L +++ F + + S+ + + T++ +L C
Sbjct: 68 VFADIK--DTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKN 125
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G++++ + K G + ++ L++MY+K G + + F ++ KDV +WN LL
Sbjct: 126 LGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGG 185
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+++HGL +EAF + + M ++ V+
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVK 208
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA HQVF ++ ++ S S + Y + LF M +
Sbjct: 663 CGSIEDA--------HQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKP 714
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TF L AC+ E G +H + EP ++ ++D++ + GLL E+VE
Sbjct: 715 DWITFVGALSACAHAGLIEEG--LHHFQSMKEFNIEPRMEHYGCMVDLFGRAGLLNEAVE 772
Query: 133 AFKEIEFK-DVVTWNALLSSFLRH 155
+++ + D W ALL + H
Sbjct: 773 FIIKMQVEPDSRVWGALLGACQVH 796
>gi|356515100|ref|XP_003526239.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Glycine max]
Length = 732
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 91/172 (52%), Gaps = 5/172 (2%)
Query: 2 LSFIRMTNFPAKTCIS--IADALPKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNF 57
LSF+ N P S IA + +Y T ++ + D S N + + RS ++
Sbjct: 467 LSFVEEFNNPLPVVPSNIIAGIYNRTSLYHETIKLLSLLEKPDAVSWNIVISACARSNSY 526
Query: 58 PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTA 116
+ALF +MHS C++ +YTF ++ C+ L G +H L+IK ++ + +
Sbjct: 527 DEVFALFKHMHSACIHPDSYTFMSIISVCTKLCLLNLGSSLHGLIIKTNLSNYDTFLGNV 586
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L+DMY K G + SV+ F+EI +K+++TW AL+++ +G A EA FQ +
Sbjct: 587 LIDMYGKCGSIDSSVKVFEEIMYKNIITWTALITALGLNGFAHEAVMRFQNL 638
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 87/172 (50%), Gaps = 10/172 (5%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFP 58
I M + P K I I + + Y+ +V FD + H + S N+ + +Y R N
Sbjct: 38 ITMGHIP-KQSIFIHNNIISSYIALGEVLNARKLFDALPHRTVVSYNTLITAYCRRGNVD 96
Query: 59 ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTAL 117
W L C+M + T YT T +L +C L RG Q+ AL I+ G D++ V TAL
Sbjct: 97 DAWNLLCHMRGSGFAPTQYTLTGLL-SCELLN-HSRGVQLQALSIRNGLLDADAFVGTAL 154
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ ++ + G E AF+++ K +VTWN+++S R+G +E +F+ +
Sbjct: 155 LGLFGRLGCWDELFLAFEDMPQKSLVTWNSMVSLLARNGFVEECKILFRDLV 206
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%), Gaps = 6/143 (4%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I+ A++L YV ++F+++ ++ S N+ + + +S LF M
Sbjct: 250 ITAANSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDALVKSERPMMALDLFLNMAR 309
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + TF V+ +C++L G+ VHA +I+ G +S+ +V TAL+D YSK
Sbjct: 310 RGLMPSQATFVAVIHSCTSLRNSVCGESVHAKIIRSGFESDVIVGTALVDFYSKCDKFIS 369
Query: 130 SVEAFKEIEFKDVVTWNALLSSF 152
+ + F +IE K+VV+WNAL++ +
Sbjct: 370 AHKCFDQIEEKNVVSWNALITGY 392
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 1/139 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL-GACSALPA 91
F+++ L + NS + R+ LF + T ++L+ + VL G +
Sbjct: 171 FEDMPQKSLVTWNSMVSLLARNGFVEECKILFRDLVGTGISLSEGSVVAVLSGLVDSEED 230
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+Q+H LM+K G E +L+ +Y + + F+++ ++VV+WN ++ +
Sbjct: 231 LEYGEQIHGLMVKCGFGCEITAANSLISVYVRCKAMFAVERLFEQVPVENVVSWNTVIDA 290
Query: 152 FLRHGLAKEAFGVFQAMTR 170
++ A +F M R
Sbjct: 291 LVKSERPMMALDLFLNMAR 309
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 41/178 (23%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT--AYTFTPV 82
+++ H+ FD+I ++ S N+ + Y+ N ++ ++ L + ++F+ V
Sbjct: 366 KFISAHKCFDQIEEKNVVSWNALITGYS---NICSSTSILLLQKMLQLGYSPNEFSFSAV 422
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES---VEAFKE--- 136
L + S Q+H L+I+ G +S V ++L+ Y++ GL+ E+ VE F
Sbjct: 423 LKSSSM----SNLHQLHGLIIRSGYESNEYVLSSLVMAYTRNGLINEALSFVEEFNNPLP 478
Query: 137 --------------------------IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+E D V+WN ++S+ R E F +F+ M
Sbjct: 479 VVPSNIIAGIYNRTSLYHETIKLLSLLEKPDAVSWNIVISACARSNSYDEVFALFKHM 536
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + + D+ NS +F + ++ LF + + + +TF ++ S L +
Sbjct: 480 VFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLAS 539
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q HA +IK G D++P V AL+DMY+K G + E F+ +DV+ WN+++++
Sbjct: 540 MFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITT 599
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A+EA VF+ M VE
Sbjct: 600 YAQHGHAEEALQVFRLMGEAEVE 622
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 74/137 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD ++ D S N+ + Y+++R+ +F M L + TF +LG S+ A
Sbjct: 379 VFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLA 438
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E KQ+H L+IK GT + +AL+D+YSK L+ ++ F + +KD+V WN+++
Sbjct: 439 IELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVIWNSMIFG 498
Query: 152 FLRHGLAKEAFGVFQAM 168
++ +EA +F +
Sbjct: 499 HAQNEQGEEAIKLFNQL 515
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF-CYMHSTCLNLTAYTFTPVLGACSAL 89
+FD + H +L S S + YT+ +LF + ++C + VL AC+
Sbjct: 74 HLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKASCEVPNEFLLASVLRACTQS 133
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G+QVH + +K D+ V TAL+++Y+K G + E++ F + + VTWN ++
Sbjct: 134 KAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVI 193
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ + + G A +F M E V
Sbjct: 194 TGYAQIGCGGVALELFDRMGIEGV 217
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R ++FD + + +L S + + Y ++ +F M + T +L
Sbjct: 271 RLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILN 330
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C +L A +G+Q+HA +IK +++ VK AL+DMY+K L E+ F + D ++
Sbjct: 331 SCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAIS 390
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
+NA++ + ++ EA +FQ M
Sbjct: 391 YNAMIEGYSKNRDLAEAVNIFQRM 414
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 52/94 (55%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ + ACSAL E G+Q+H + T+++ V L+D+Y K L + + F
Sbjct: 222 FVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDC 281
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+E++++V+W ++S ++++ EA +F MT+
Sbjct: 282 MEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQ 315
>gi|410110013|gb|AFV61086.1| pentatricopeptide repeat-containing protein 81, partial [Phyla
dulcis]
Length = 304
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 124 ISNALVSMYLKSNSRNVEDALKIFERINPKDLVSWNTILTGLSQNGLSENALRLFQNIHL 183
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 184 DHLVTDQYTFAVVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 243
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ S+ +HG K A +F MT R++
Sbjct: 244 AWESFESSHKETSVTWNSIMFSYAQHGQGKFALDLFYLMTERRIKL 289
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 41 RVFDS-SDGCRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVKQRLEMDAYTLSSVISACFE 99
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +HAL+IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 100 DTQQILGKSLHALVIKKGLDEVTQISNALVSMYLKSNSRNVEDALKIFERINPKDLVSWN 159
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 160 TILTGLSQNGLSENALRLFQNI 181
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLR 154
+Q+H ++K G + E V A + YS+ G + ++ F + +D+VTWN++L+++L
Sbjct: 5 RQLHGKIMKRGLEHENTVLNATITGYSECGCIEDAKRVFDSSDGCRDLVTWNSMLAAYLE 64
Query: 155 HGLAKEAFGVFQAMTRERVE 174
H L + F +F M ++R+E
Sbjct: 65 HNLEEYGFNIFLEMVKQRLE 84
>gi|410110001|gb|AFV61080.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
viburnoides]
Length = 373
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNSRNVEDALKIFERINVKDLVSWNTILTGLSQNGLSENALRLFQNIHX 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLVXDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGXEGNXYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG A +F MT R++
Sbjct: 315 AWESFESSHKETSVTWNSIIFAYAQHGQGXXALDLFYLMTERRIKL 360
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEEXGFNIFFEMVRXXLEMDAYTLSSVISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +HAL+IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSLHALVIKKGLDEVTQISNALVSMYLKSNSRNVEDALKIFERINVKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 231 TILTGLSQNGLSENALRLFQ 250
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R +VF + + S N+ + Y N +LF M + + TF P+L
Sbjct: 4 RRVEDASKVFKYMRERNAVSWNALIGGYAEMGNLERCVSLFVGMEMDGVXVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 64 TLLNDAESYDLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKRVFDSSDGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M R +E
Sbjct: 124 VTWNSMLAAYLEHNLEEXGFNIFFEMVRXXLEM 156
>gi|297797117|ref|XP_002866443.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
gi|297312278|gb|EFH42702.1| hypothetical protein ARALYDRAFT_919404 [Arabidopsis lyrata subsp.
lyrata]
Length = 749
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYT------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +AL Y ++FD + S + + +Y++S + ++F M
Sbjct: 402 VSLCNALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSVFSQMRE 461
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
TF+ VL +C++L + E G+QVH+L K G + V++ L+DMY+K G + +
Sbjct: 462 MGFQPNQVTFSGVLASCASLCSLEYGQQVHSLTCKTGFARDKCVESVLIDMYAKCGSVRD 521
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ F+ ++ DV++W A++S + +HG+AK+A +F+ M
Sbjct: 522 AIKVFESLKDPDVISWTAMISGYAQHGMAKDALELFRKM 560
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFDEI + S + T + + F + + Y + + AC +
Sbjct: 118 RQVFDEIPQKSVFSWTVLMVGATENGFYRDGIDYFVEILGCDIVPDEYALSAAIQACIGV 177
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ VHA +I G S V T+L+ MY+K G +G+S + F +E ++ V+WNA++
Sbjct: 178 DSIVVGEMVHAQVITRGFSSRTFVNTSLLGMYAKLGRIGDSCKVFNSLENRNQVSWNAMI 237
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S F+ +GL EA+ F M E +
Sbjct: 238 SGFVSNGLYAEAYNSFLRMLGEEI 261
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 4/147 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + + + S N+ + + + + + F M + F V A L
Sbjct: 220 KVFNSLENRNQVSWNAMISGFVSNGLYAEAYNSFLRMLGEEIRPNVACFISVSKAIGQLG 279
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV---VTWNA 147
E+G+ ++ + + G S V TAL+DM++K G + ES F F + WNA
Sbjct: 280 DVEKGRYINRIAFEIGMQSNIHVGTALIDMFAKCGCVTESWSVFVS-NFSGCGVNLPWNA 338
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S F G +EA +F M + ++
Sbjct: 339 MISGFTISGHGEEAMLLFLRMCQNNIK 365
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + +T S + LF M + YT+ L + + + + E KQ+H ++ K
Sbjct: 337 NAMISGFTISGHGEEAMLLFLRMCQNNIKRDVYTYCSTLNSIADMRSLEYVKQLHGMIWK 396
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G+ + ALMD Y+K G L + F E + ++W L++++ + ++A V
Sbjct: 397 SGSIGVSLC-NALMDAYAKCGELDAMRKLFDTWEESNQISWTTLVTAYSQSSEWEDALSV 455
Query: 165 FQAM 168
F M
Sbjct: 456 FSQM 459
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + ++ S + + Y + N + AL C M + + +TF+ L AC AL
Sbjct: 61 VFDRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGV 120
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q+H + +K G + VV A +DMYSK G +G + + F ++ F+++V+WNA+++
Sbjct: 121 VENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAG 180
Query: 152 FLRHGLAKEAFGVFQAM 168
G +++ +FQ M
Sbjct: 181 HTHEGNGRKSLVLFQRM 197
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R QVF+++ +L S N+ + +T N + LF M +TFT L
Sbjct: 155 RIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLK 214
Query: 85 ACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
AC AL A G Q+HA +I G ++ +A++D+Y+K G L E+ + F IE K++
Sbjct: 215 ACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNL 274
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++W+AL+ F + G EA +F+ + RE V
Sbjct: 275 ISWSALIQGFAQEGNLLEAMDLFRQL-RESV 304
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 85/172 (49%), Gaps = 6/172 (3%)
Query: 10 FPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
FP IA A+ Y +VFD I +L S ++ + + + N L
Sbjct: 237 FPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDL 296
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F + + N+ + + ++G + L E+GKQ+H ++K + + V +++DMY K
Sbjct: 297 FRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLK 356
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
GL E+ F E++ ++VV+W +++ + +HGL ++A +F M + +E
Sbjct: 357 CGLTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIEL 408
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+L CS ++G QVHA + G + ++ L+DMY K + + F +
Sbjct: 7 LAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRML 66
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++VV+W AL+ +L+ G AK + + M
Sbjct: 67 ERNVVSWTALMCGYLQEGNAKGSLALLCEM 96
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F I + S N + Y LF M + + A TFT VL ACS L
Sbjct: 364 KIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLA 423
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GK++H L+I+ D+ VV AL+DMY+K G + E+ FK + +D+V+W ++++
Sbjct: 424 ALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ HG A A +F M + V+
Sbjct: 484 AYGSHGHAYGALELFAEMLQSNVK 507
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 71/143 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+E+ D++ N+ + Y +S NF F M + T T + +C+ L
Sbjct: 163 LFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
RG ++H +I G + + +AL+DMY K G L ++E F+++ K VV WN+++S
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISG 282
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ G +F+ M E V+
Sbjct: 283 YGLKGDIISCIQLFKRMYNEGVK 305
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 4/160 (2%)
Query: 15 CISIADALPKRYVYTHQ--VFDEISH-GDLSSLNSQLFSYTRSRNFPATWALF-CYMHST 70
C ++ + ++Y H VFD + + ++S N + YT++ + LF +H
Sbjct: 41 CKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYP 100
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
L +YT+ V AC L GK +H +IK G + VV ++L+ MY K ++
Sbjct: 101 YLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKA 160
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F E+ KDV WN ++S + + G K+A F M R
Sbjct: 161 IWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFGLMRR 200
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+++ + + NS + Y + + LF M++ + T T + ++ CS
Sbjct: 263 EIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSA 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH I+ + V ++LMD+Y K G + + + FK I VV+WN ++S
Sbjct: 323 RLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMIS 382
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ G EA G+F M + VE
Sbjct: 383 GYVAEGKLFEALGLFSEMRKSYVE 406
>gi|255540955|ref|XP_002511542.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550657|gb|EEF52144.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 434
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y Q+FD++ NS + +Y++ F MH + L+ +T PV+ ACS
Sbjct: 48 YARQLFDQVPQPGQILYNSLISTYSKLSLHKDALKTFFSMHHSDTRLSCFTGPPVIKACS 107
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+L A + GKQVH+L++ G D V+T+LMD Y+K G LG + + F I KD +++N
Sbjct: 108 SLLAIDVGKQVHSLIVICGIDCNVYVQTSLMDFYAKIGELGSARKIFDGILVKDPISYNC 167
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
L++ + + G A +F +MT V
Sbjct: 168 LITGYSKAGDVIAARRLFDSMTERTV 193
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 74/148 (50%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ ++FD ++ + S N+ + Y + + F M + ++ T +L C
Sbjct: 179 IAARRLFDSMTERTVVSWNAMISCYAHNGDLNEGLKTFERMQAEDISPNEITLVTLLSIC 238
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L E G ++ + +V TA+++MY K G + ++ + F + +D+V W+
Sbjct: 239 AKLGDLEMGLRIKKYIEDNNLCVNMIVSTAILEMYVKCGAVDDARKEFDRMGQRDIVAWS 298
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A+++ + ++G + EA +F+ M RE+V+
Sbjct: 299 AMIAGYAQNGRSNEALELFECMRREKVK 326
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D+ + ++ + Y ++ LF M + T VL AC L +
Sbjct: 286 FDRMGQRDIVAWSAMIAGYAQNGRSNEALELFECMRREKVKPNDVTLVSVLSACVQLGSV 345
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G + + + S V +AL+ MYSK G + ++ E F + KD+VTWN+++
Sbjct: 346 EMGNYIGSYVESQDLASNVYVASALVGMYSKCGNISKAREVFGKTPQKDIVTWNSMIVGL 405
Query: 153 LRHGLAKEAFGVFQAM 168
+G AK+A +++ M
Sbjct: 406 AVNGFAKDAIALYRNM 421
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 81/142 (57%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD++ + + NS L Y ++ F M + + T ++ CS+LP
Sbjct: 667 NLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLP 726
Query: 91 APERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E G Q+H+L+IK G + V++TAL+DMYSK G + ++ F + K++V+WNA++
Sbjct: 727 ALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMI 786
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S + +HG +KEA +++ M ++
Sbjct: 787 SGYSKHGCSKEALILYEEMPKK 808
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 80/143 (55%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F+E+ +L++ N+ + +Y R ++ L+ M + +TF V+ AC
Sbjct: 127 YARKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACI 186
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A+ +Q+ + ++K G + V AL+D Y+++G + ++V + EIE VVTWNA
Sbjct: 187 AMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNA 246
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
+++ +++ +EA+G+F M +
Sbjct: 247 VIAGYVKILSWEEAWGIFDRMLK 269
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 79/141 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ + + NS + + + +F LF M + + +L A + L
Sbjct: 332 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLA 391
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+G+++H +++ +S+ ++ +AL+DMYSK G++ E+ + F+ + ++ V++NALL+
Sbjct: 392 DIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVSYNALLA 451
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+++ G A+EA ++ M E
Sbjct: 452 GYVQEGKAEEALELYHDMQSE 472
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 76/146 (52%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y ++F+ ++ + S NS + Y ++ LF M + ++ + +L
Sbjct: 529 RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLS 588
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C +L ++G+++H +++ + E +++ L+DMY+K G + + + + + KDV+
Sbjct: 589 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVIL 648
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTR 170
N ++S+F+ G A +A +F M +
Sbjct: 649 NNVMVSAFVNSGRANDAKNLFDQMEQ 674
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
DEI + + N+ + Y + ++ W +F M + +TF L C AL +
Sbjct: 233 LDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSR 292
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ GKQVH+ +I G + V AL+DMY+K ++ F E+ ++ VTWN+++S+
Sbjct: 293 DGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAE 352
Query: 153 LRHGLAKEAFGVFQAM 168
+ G +A +F M
Sbjct: 353 AQFGHFNDALVLFLRM 368
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSA 88
HQVF + + S N+ L Y + L+ M S + +TFT +L C+
Sbjct: 432 HQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCAN 491
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+G+Q+HA +I+ +V+T L+ MYS+ G L + E F + ++ +WN++
Sbjct: 492 QRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSM 551
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ + ++G +EA +F+ M
Sbjct: 552 IEGYQQNGETQEALRLFKQM 571
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA---FK 135
++ ++ C + +RGK +H MI G + + + T ++ +Y++ G L + A F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 136 EIEFKDVVTWNALLSSFLR 154
E+ +++ WN ++ ++ R
Sbjct: 134 EMPERNLTAWNTMILAYAR 152
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD ++ ++ S N+ + Y++ L+ M + TF +L ACS
Sbjct: 770 VFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGL 829
Query: 92 PERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
E G ++ M + +++ T ++D+ + G L ++ E +++ + +V TW ALL
Sbjct: 830 VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 889
Query: 150 SSFLRH 155
+ H
Sbjct: 890 GACRVH 895
>gi|410109967|gb|AFV61063.1| pentatricopeptide repeat-containing protein 81, partial [Aloysia
lycioides]
Length = 379
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 186 ISNALISMYLKSNSRNVEDPLKIFEHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 245
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 246 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVSSALIFMYSKCGIIED 305
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 306 ARESFESSHXETSVTWNSIIFAYAQHGQGKIALDLFYLMTERHIKL 351
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 2/131 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L + AYT + ++ AC GK +H
Sbjct: 113 DLVTWNSMLAAYLEXNLEECGFNIFLEMVRQRLEMDAYTLSSIISACFEDSQXSLGKSLH 172
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G D + AL+ MY K + + ++ F+ I KD+V+WN +L+ ++GL
Sbjct: 173 GLVIKKGLDQVTQISNALISMYLKSNSRNVEDPLKIFEHINVKDLVSWNTILTGLSQNGL 232
Query: 158 AKEAFGVFQAM 168
++ A +FQ +
Sbjct: 233 SENALRLFQNI 243
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 1 NNVFKYMLERNTVSWNALIGGYAEMGNLERCIELFMCMZMEGVKIDDATFAPLLTLLYDA 60
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNAL 148
+ + +Q+H ++K G + E V A + Y++ G + + F + ++D+VTWN++
Sbjct: 61 ESYDLTRQLHGKIMKXGLEHENTVLNATIXAYAEXGCIEDXKRVFBSSDGYRDLVTWNSM 120
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
L+++L L + F +F M R+R+E
Sbjct: 121 LAAYLEXNLEECGFNIFLEMVRQRLEM 147
>gi|410109975|gb|AFV61067.1| pentatricopeptide repeat-containing protein 81, partial
[Coelocarpum swinglei]
Length = 394
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 80/145 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F++I DL S N+ L +++ LF +H L + YTF VL +CS L
Sbjct: 219 KIFEQIDVKDLVSWNTILTGLSQNGLSENALRLFQNIHLDHLVIDQYTFAAVLRSCSDLA 278
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+QVH L++K G + V +AL+ MYSK G++ +S E+F+ VTWN+++
Sbjct: 279 TLQLGRQVHVLVVKSGFEGNEYVASALIFMYSKCGIIEDSRESFEASHKNSSVTWNSIIF 338
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ +HG K A +F MT V+
Sbjct: 339 AYAQHGQGKIALELFYLMTERDVKL 363
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 80/155 (51%), Gaps = 11/155 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C SI DA KR VFD + DL + NS L +Y + +F M L
Sbjct: 107 CGSIPDA--KR------VFDSADGYRDLVTWNSMLAAYLEQNLEQCGFKIFLEMVRRRLE 158
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY--SKYGLLGESV 131
+ AYT + V+ AC GK +H L+IK G + V AL+ MY S + +++
Sbjct: 159 MDAYTLSSVISACFGDSQQSLGKSLHGLVIKRGLEQVTQVSNALISMYLKSNSQXVEDAL 218
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
+ F++I+ KD+V+WN +L+ ++GL++ A +FQ
Sbjct: 219 KIFEQIDVKDLVSWNTILTGLSQNGLSENALRLFQ 253
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 7 RRVEDANKVFKYMQERNTVSWNALIGGYAEMGNLERCIKLFVGMEMEGVRVDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 67 TLLYDAESYDLTRQLHGKIMKRGLEHENTVLNATITAYAECGSIPDAKRVFDSADGYRDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L L + F +F M R R+E
Sbjct: 127 VTWNSMLAAYLEQNLEQCGFKIFLEMVRRRLEM 159
>gi|410109977|gb|AFV61068.1| pentatricopeptide repeat-containing protein 81, partial [Dipyrena
glaberrima]
Length = 305
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 79/145 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F++I DL S N+ L +++ LF MH L + YTF VL +CS L
Sbjct: 145 KIFEDIDVKDLVSWNTILTGLSQNGLSENALRLFQQMHLDHLXIDQYTFAAVLRSCSDLA 204
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H L++K G + V +AL+ MYSK G++ ++ E+F+ VTWN+++
Sbjct: 205 TLXLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIEDARESFEASHKDSSVTWNSIIF 264
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ +HG K A +F M E V+
Sbjct: 265 AYAQHGQGKIALDLFYLMXEELVKL 289
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 74/141 (52%), Gaps = 3/141 (2%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 41 RVFDSADGYRDLVTWNSMLAAYLEHDLEECGFNIFLEMVRQRLVMDAYTLSSIISACFGD 100
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNA 147
GK +H L+IK G + AL+ MY K + ++++ F++I+ KD+V+WN
Sbjct: 101 SQQNLGKSLHGLVIKRGLEQVTQASNALIXMYLKSNSQNVEDALKIFEDIDVKDLVSWNT 160
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ M
Sbjct: 161 ILTGLSQNGLSENALRLFQQM 181
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSS 151
E +Q+H ++K G + E V A + Y++ G + ++ F + ++D+VTWN++L++
Sbjct: 2 ELTRQLHGKIMKRGLEXENTVLNATITAYAECGCIQDAKRVFDSADGYRDLVTWNSMLAA 61
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+L H L + F +F M R+R+
Sbjct: 62 YLEHDLEECGFNIFLEMVRQRL 83
>gi|302784186|ref|XP_002973865.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
gi|300158197|gb|EFJ24820.1| hypothetical protein SELMODRAFT_100621 [Selaginella moellendorffii]
Length = 616
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 85/148 (57%), Gaps = 2/148 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC--LNLTAYTFTPVLGAC 86
+ +VFD+ D+ NS + +Y++S + LF M S+ + A T+T VL AC
Sbjct: 221 SREVFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSMGSSSPPVEPNAITYTTVLAAC 280
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
SA+ E+GK+VH M+ G + + +L++MY+K G + E+ E F ++ + VV+W
Sbjct: 281 SAVEDLEQGKEVHRQMVDAGFQFDAAAENSLVNMYAKCGSITEAREVFDGMKQRTVVSWT 340
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S+++R G +EA +++ M E VE
Sbjct: 341 GIISAYVRKGHPREALDLYRKMGSEGVE 368
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C SI +A +VFD + + S + +Y R + L+
Sbjct: 311 LVNMYAK-CGSITEA--------REVFDGMKQRTVVSWTGIISAYVRKGHPREALDLYRK 361
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M S + TF VL ACS+L A E GK VHA M G + V AL+ +Y K G
Sbjct: 362 MGSEGVEPNGITFASVLSACSSLGALEEGKAVHAQMKAAGYKPDLAVANALVSLYGKCGS 421
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + + F ++ ++VV+W A++S++ H ++EA +++AM E V+
Sbjct: 422 VDSARKVFDRMKIRNVVSWTAMISAYAHHRHSEEAIQLYKAMDLEGVQ 469
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 84/156 (53%), Gaps = 13/156 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VFD + D S + + Y R + A A+ Y + ++
Sbjct: 115 CGSLEDA--------KKVFDGMRRRDSISWSKMIAGYVR--HGLAREAIKLY-KAMAIDP 163
Query: 75 TAYTFTPVLGACSALP--APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
+TF+ VL ACS+L A E GK++HA M + + V +AL+ M++K G L ES E
Sbjct: 164 DGFTFSAVLNACSSLGPRALEVGKEIHAHMKRIWLKPDVFVDSALVTMFAKCGSLKESRE 223
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + +KDV+ WN+++ ++ + G +EA +F++M
Sbjct: 224 VFDDCRWKDVLFWNSMIVAYSQSGHPREAIELFKSM 259
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A + +L C L A GK++H ++K G V L+ MYSK G L ++ + F
Sbjct: 70 APAYGNLLRDCGELAA---GKKIHEHVVKNGYYENVYVGNHLVQMYSKCGSLEDAKKVFD 126
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ +D ++W+ +++ ++RHGLA+EA +++AM
Sbjct: 127 GMRRRDSISWSKMIAGYVRHGLAREAIKLYKAMA 160
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 77/144 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ I D+ S S L +S F ALF M + L T VL AC+
Sbjct: 268 QEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQT 327
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A ++GK +H L+ K + + V++TAL+DMY+K G + +++ F+ + ++V TWNAL+
Sbjct: 328 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALI 387
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
HG ++A +F M +++
Sbjct: 388 GGLAMHGHGEDAISLFDQMEHDKL 411
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F ++ + D N+ + Y RS+N +L+ +M + + YT+ VL AC+
Sbjct: 63 YARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACA 122
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A + G++ H ++K G S+ V AL+ Y G G + + F E +DVVTWN
Sbjct: 123 RLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
++++ L GL+++AF + MT+
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTK 205
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T ++ AC+ L ERGK +H+ + G D V A++DMY K + + E F I
Sbjct: 215 TMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRI 274
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
KDV++W ++LS + G +EA +FQ M ++E
Sbjct: 275 REKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIEL 312
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +L Y+ T +VFDE+ ++ S S L Y ++ LF M
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +TF VLG +A A E+G QVH ++IK G DS V ++++MYSK ++ +
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F +E ++ V+WN++++ F+ +GL EAF +F M E V+
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ I D+ + ++ L Y + + +F + + +TF+ VL AC+A
Sbjct: 448 KIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPT 507
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+GKQ H+ IK G + V +AL+ MY+K G + + E FK +D+V+WN+++
Sbjct: 508 ASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMI 567
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S + +HG K++ +F+ M + +E
Sbjct: 568 SGYAQHGCGKKSLKIFEEMRSKNLEL 593
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
++ Q+FDE LS N LF ++R+ LF + + + + VL C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L GKQVH IK G + V T+L+DMY K + + F E+ K+VV+W +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
LL+ + ++GL ++A +F M E ++
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIK 190
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 81/160 (50%), Gaps = 11/160 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA K + H V + +S + S Q R+ N LFC M +
Sbjct: 342 CSEIDDAF-KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMN------LFCQMRREGVRP 394
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T++ +L A +A+ Q+HAL++K ++ P V TAL D YSK G E+ + F
Sbjct: 395 NHFTYSTILTANAAVSPS----QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIF 450
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ I+ KD+V W+A+LS + + G + A +F + +E VE
Sbjct: 451 ELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVE 490
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + + S NS + + + + LF M + LT F V+ C+ +
Sbjct: 250 VFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKE 309
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
KQ+H +IK G+D + +KTALM YSK + ++ + F + ++VV+W A++S
Sbjct: 310 MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIIS 369
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++++G A +F M RE V
Sbjct: 370 GYVQNGRTDRAMNLFCQMRREGV 392
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF DL S NS + Y + + +F M S L L TF V+ AC+
Sbjct: 549 NEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHA 608
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKDVVT-WN 146
G++ LM+K P ++ + ++D+YS+ G+L ++++ ++ F T W
Sbjct: 609 GLVNEGQRYFDLMVK-DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 667
Query: 147 ALLSSFLRH 155
LL++ H
Sbjct: 668 TLLAACRVH 676
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD ++ D+ + N+ + Y ++ LF M C+ T T VL AC+ +
Sbjct: 280 RIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKITLTAVLSACATIG 339
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+ + G + V TAL+DMY+K G L + FK++ K+ +WNA++S
Sbjct: 340 ALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKNEASWNAMIS 399
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ HG AKEA +FQ M+ E
Sbjct: 400 ALAAHGKAKEALSLFQHMSDE 420
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VFDEI H D S NS + Y ++ +F M + +LGAC L
Sbjct: 178 KVFDEIPHRDSVSWNSMIAGYAKAGCAREAVEVFREMGRRDGFEPDEMSLVSLLGACGEL 237
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+ V +++ G + +AL+ MY+K G L + F + +DV+TWNA++
Sbjct: 238 GDLELGRWVEGFVVERGMTLNSYIGSALISMYAKCGELESARRIFDGMAARDVITWNAVI 297
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S + ++G+A EA +F M + V
Sbjct: 298 SGYAQNGMADEAILLFHGMKEDCV 321
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 24 KRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTP 81
K + Y+ +F I+ H + + N + + T + N+P +LF M S L +TF
Sbjct: 68 KNFPYSSLLFSHIAPHPNDYAFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPF 127
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+C+ L + H+L+ K S+P +L+ Y++ GL+ + + F EI +D
Sbjct: 128 FFLSCANLASLSHACAAHSLLFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRD 187
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
V+WN++++ + + G A+EA VF+ M R
Sbjct: 188 SVSWNSMIAGYAKAGCAREAVEVFREMGR 216
>gi|410109959|gb|AFV61059.1| pentatricopeptide repeat-containing protein 81, partial
[Acantholippia seriphioides]
Length = 376
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 183 ISNALISMYLKSNSRTVEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFQNIHL 242
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 243 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 302
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 303 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFNLMTERHIKL 348
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 100 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVKQRLEMDAYTLSSVISACFE 158
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESVEAFKEIEFKDVVTWN 146
GK +H L+IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 159 DTQQSLGKSLHGLVIKKGLDQVTQISNALISMYLKSNSRTVEDALKIFEHINIKDLVSWN 218
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 219 TILTGLSQNGLSENALRLFQNI 240
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N + LF M + + TF P+L + + +Q+H +
Sbjct: 11 SWNALIGGYAEMGNLESCITLFVGMEMEGVRVDDATFAPLLTLLYDAESYDLTRQLHGKI 70
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V + Y++ G + ++ F + ++D+VTWN++L+++L H L +
Sbjct: 71 MKRGLEHENTVLNXTITAYAECGCIEDAKRVFDSSDGYRDLVTWNSMLAAYLEHNLEEYG 130
Query: 162 FGVFQAMTRERVEF 175
F +F M ++R+E
Sbjct: 131 FNIFLEMVKQRLEM 144
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 76/143 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + + D+ N+ +F ++ LF + + L +TF ++ S L +
Sbjct: 497 VFSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLAS 556
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q HA +IK G DS+P + AL+DMY+K G + E F+ KDV+ WN+++S+
Sbjct: 557 IFHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMIST 616
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A+EA VF M VE
Sbjct: 617 YAQHGHAEEALHVFGMMEGAGVE 639
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 70/134 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ ++ D S N+ + Y R + +F M L + TF +LG S+
Sbjct: 396 VFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSD 455
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E KQ+H L++K GT + +AL+D+YSK+ L+ ++ F ++ +D+V WNA++
Sbjct: 456 LELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFG 515
Query: 152 FLRHGLAKEAFGVF 165
++ +EA +F
Sbjct: 516 LAQNERGEEAVKLF 529
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 73/144 (50%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + ++FD + + +L S + + Y ++ ++F + + T +L
Sbjct: 288 RLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILN 347
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C +L A +G+QVHA +IK +S+ VK AL+DMY+K L E+ F+ + D ++
Sbjct: 348 SCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAIS 407
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
+NA++ + R G A +F M
Sbjct: 408 YNAMIEGYARLGDLTGAVEIFGKM 431
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 65/139 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + + + + Y+++ LF M + + ACS L
Sbjct: 194 VFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGF 253
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+Q+H + +S+ V AL+D+Y K L + F +E +++V+W +++
Sbjct: 254 VEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAG 313
Query: 152 FLRHGLAKEAFGVFQAMTR 170
++++ L EA +F +++
Sbjct: 314 YMQNSLDTEAMSMFWQLSQ 332
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ L AC+ A G+QVH + K G D+ V TAL+++Y+K G + ++ F
Sbjct: 138 FLLASALRACAQSRAARFGEQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDA 197
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ VTW A+++ + + G A A +F M + V
Sbjct: 198 LPARNPVTWTAVITGYSQAGQAGVALELFGRMGLDGVR 235
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
HA + G + + L+ YSK G LG++ F + +++V+W + +S + +HG
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 159 KEAFGVFQA 167
+A +F A
Sbjct: 113 DDALLLFAA 121
>gi|410109979|gb|AFV61069.1| pentatricopeptide repeat-containing protein 81, partial [Junellia
succulentifolia]
Length = 406
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 82/145 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ I DL S N+ L +++ + LF ++H L + YTF VL +CS L
Sbjct: 220 KIFEHIEVKDLVSWNTILTGLSQNGLSESALKLFQHIHLDHLVIDQYTFAAVLRSCSDLA 279
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H L++K G + V +AL+ MYSK G++ ++ E+F+ VTWN+++
Sbjct: 280 TLQLGRQIHVLVVKSGFEGNEYVCSALIFMYSKCGIIEDARESFESSPKNSSVTWNSIIF 339
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ +HG K A +F +MT ++
Sbjct: 340 AYAQHGQGKIALELFYSMTERNIKL 364
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR +VF + + S N+ + Y N LF YM + + TF P+L
Sbjct: 7 KRVEDADKVFKYMQERNTVSWNALIGGYAEMDNLQRCIELFMYMDMEGVRVDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ E KQ+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 67 SLLYEAESYEVTKQLHGKIMKRGLEHENTVINATITAYAECGCIQDAKRVFDNADGYRDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 127 VTWNSMLAAYLEHNLEECGFNIFLEMVRQRLE 158
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 4/140 (2%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 115 RVFDNADGYRDLVTWNSMLAAYLEHNLEECGFNIFLEMVRQRLEVDAYTLSSIISACFGD 174
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL---LGESVEAFKEIEFKDVVTWN 146
GK +H L+IK G + + AL+ MY K + ++++ F+ IE KD+V+WN
Sbjct: 175 SQQSLGKSLHGLVIKKGLEHVTQISNALISMYLKSNSQKNVEDALKIFEHIEVKDLVSWN 234
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 235 TILTGLSQNGLSESALKLFQ 254
>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 88/166 (53%), Gaps = 6/166 (3%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +L Y+ T +VFDE+ ++ S S L Y ++ LF M
Sbjct: 127 VSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQL 186
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +TF VLG +A A E+G QVH ++IK G DS V ++++MYSK ++ +
Sbjct: 187 EGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSD 246
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F +E ++ V+WN++++ F+ +GL EAF +F M E V+
Sbjct: 247 AKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKL 292
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 84/163 (51%), Gaps = 9/163 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLN 73
C I DA K + H V + +S + S Q R+ N LFC M +
Sbjct: 342 CSEIDDAF-KLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMN------LFCQMRREEGVE 394
Query: 74 LTAYTFTPVLGACSALPAP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
+TF+ VL AC+A A E+GKQ H+ IK G + V +AL+ MY+K G + + E
Sbjct: 395 PNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANE 454
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
FK +D+V+WN+++S + +HG K++ +F+ M + +E
Sbjct: 455 VFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLEL 497
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
++ Q+FDE LS N LF ++R+ LF + + + + VL C
Sbjct: 44 HSQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCG 103
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L GKQVH IK G + V T+L+DMY K + + F E+ K+VV+W +
Sbjct: 104 CLFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTS 163
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
LL+ + ++GL ++A +F M E ++
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIK 190
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + + S NS + + + + LF M + LT F V+ C+ +
Sbjct: 250 VFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKE 309
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
KQ+H +IK G+D + +KTALM YSK + ++ + F + ++VV+W A++S
Sbjct: 310 MSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAIIS 369
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++++G A +F M RE
Sbjct: 370 GYVQNGRTDRAMNLFCQMRRE 390
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 4/129 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF DL S NS + Y + + +F M S L L TF V+ AC+
Sbjct: 453 NEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHA 512
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKDVVT-WN 146
G++ LM+K P ++ + ++D+YS+ G+L ++++ ++ F T W
Sbjct: 513 GLVNEGQRYFDLMVK-DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWR 571
Query: 147 ALLSSFLRH 155
LL++ H
Sbjct: 572 TLLAACRVH 580
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + H + S + + Y ++ P LF M + +TF AC+
Sbjct: 73 VFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGARPNQFTFGSAARACAGGRC 132
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+QVHA KG + V++ALMDM+ + G +G++ F E+E KD+V+WNAL+
Sbjct: 133 ARSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRG 192
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
F+ G +A G+F +M R+
Sbjct: 193 FVERGHYSDALGLFASMLRD 212
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++D I DL S + + ++ RN+ LFC +H L + + +LG C+ +
Sbjct: 275 IYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIHREGLRIDGILLSALLGVCANVA 334
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G Q+HA M K + + AL+DMY+K G +S AF E+ ++V++W +L++
Sbjct: 335 SIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYLDSRRAFDEMPSRNVISWTSLIT 394
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HG ++A +F M + V+
Sbjct: 395 ACAQHGFGEDAVTLFARMEEDGVK 418
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA ++F E+ DL S N+ + + ++ LF M +
Sbjct: 165 CGSVGDA--------RRLFAEMERKDLVSWNALMRGFVERGHYSDALGLFASMLRDGMLP 216
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF L AC A+ + +H +IK G E V +L+D Y+K L + +
Sbjct: 217 DHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDEKVATASLIDSYAKCRSLSSARVIY 276
Query: 135 KEIEFKDVVTWNALLSSF-LRHGLAKEAFGVFQAMTRE 171
I D+V+ AL+S + +++A +F + RE
Sbjct: 277 DSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIHRE 314
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVH-ALMIKGGTDSEPV----VKTALMDMYSKYGLLGE 129
A ++ +L +C A +GK VH +I +D P + T L+ YS +G +
Sbjct: 10 AAALYSSLLQSCIGANAFRQGKSVHHRAIITASSDPSPPDLLHLSTKLVMFYSHFGDVAA 69
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F + + VV+W A++S + ++G A EA +F M R
Sbjct: 70 ARAVFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLR 110
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD++ D S + + Y++S + LF M L +F+ L C+ +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GKQ+H ++KGG ++ V AL+ MY K G + E+ + FKE+ KD+V+WN +++
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ RHG + A F++M RE
Sbjct: 484 GYSRHGFGEVALRFFESMKRE 504
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 12/142 (8%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--HSTCLNLTAYTFTPVLGACS 87
++FDE+ DL S N + Y R+RN LF M C ++ +L +
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC------SWNTMLSGYA 168
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + V M + V AL+ Y + + E+ FK E +V+WN
Sbjct: 169 QNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 148 LLSSFLRHGLAKEAFGVFQAMT 169
LL F++ EA F +M
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMN 246
Score = 38.9 bits (89), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S N+ L +Y ++ C + + N ++ +LG
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGG-----F 229
Query: 92 PERGKQVHALMIKGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++ K V A + VV ++ Y++ G + E+ + F E +DV TW A++S
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++++ + +EA +F M ER E
Sbjct: 290 GYIQNRMVEEARELFDKMP-ERNE 312
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 82/145 (56%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FD+I + DL S +S + +Y+++ +F + LF M + A VL AC
Sbjct: 1124 VSAKKIFDQIPNKDLISWSSMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSAC 1183
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L A + GK +H + + ++ +++ +L+DM++K G + E+++ F ++E KD ++WN
Sbjct: 1184 AHLGALDLGKWIHDYVRRNNIKADTIMENSLIDMFAKCGCVQEALQVFTDMEEKDTLSWN 1243
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
+++ +G EA +F +M E
Sbjct: 1244 SIILGLANNGFEDEALDIFHSMLTE 1268
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V H+VF +I N+ L +S + + TF VL AC
Sbjct: 891 VSAHKVFKQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKAC 950
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ AP+ G+Q+H +IK G + V +L+ +Y+ G L + F E+ KDVV+WN
Sbjct: 951 AKTCAPKEGEQMHNHVIKLGFLLDIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWN 1010
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L+ + +H KE +F+ M E V+
Sbjct: 1011 SLIGGYSQHNRLKEVLTLFKLMQAEEVQ 1038
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD++ ++ S + YTR+ + L +M + ++ + T V+ A S
Sbjct: 563 YARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAIS 622
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWN 146
L G+ ++ K G S+ V +L+D+Y+K G + S++ F E ++ +++V+W
Sbjct: 623 NLGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWT 682
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++S F HGL+ EA +F M R ++
Sbjct: 683 SIISGFAMHGLSVEALELFAEMRRAGIK 710
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
R + P++T + + D P + SHG LF + R
Sbjct: 428 RSSTPPSRTALKVFDQSPAPW---RAFLKAYSHGPFPLEALHLFKHARQH---------- 474
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
L + FT VL AC+ L G Q+HAL+++ G + V TAL+++Y
Sbjct: 475 ------LADDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSR 528
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L E+ + F E+ K+VV+WN +++ F G + A +F M
Sbjct: 529 CLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQM 571
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 61/137 (44%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+ D+ S NS + Y++ LF M + + T V+ AC+ L
Sbjct: 997 VFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEVQADKVTMVKVISACTHLGD 1056
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ + + + + L+D Y + G L + + F +++ K+ VT NA++++
Sbjct: 1057 WSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMITA 1116
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + G A +F +
Sbjct: 1117 YAKGGNLVSAKKIFDQI 1133
>gi|449439011|ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Cucumis sativus]
Length = 787
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF E D+ + S + Y + N + AL M + A T +L AC++L
Sbjct: 342 VFAETKEKDVITWTSMINGYIMNGNAKSALALCPAMQLDGVVPNAVTLASLLSACASLCC 401
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++GK +HA +++ DS+ +V TAL+DMY+K + S + F + K V WNALLS
Sbjct: 402 LKQGKSLHAWVMRKKLDSDVLVVTALIDMYAKCNAVSYSFQVFAKTSMKRTVPWNALLSG 461
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + LA+EA G+F++M E VE
Sbjct: 462 LIHNELAREAVGLFKSMLIEEVE 484
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + + S N+ + + ++ A+F M + + T L +C L
Sbjct: 240 QVFNVMLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVEPDSATIVSALPSCGHLK 299
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G +VH L+ K + V+ AL+DMYS+ G + E+ F E + KDV+TW ++++
Sbjct: 300 ELELGIKVHKLVQKNHLQEKIEVRNALVDMYSRCGGMDEASLVFAETKEKDVITWTSMIN 359
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ +G AK A + AM + V
Sbjct: 360 GYIMNGNAKSALALCPAMQLDGV 382
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ ACS + G +H + G S V+ +L+ MY G +G + + F
Sbjct: 185 YTFPLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGKVGLARQVFNV 244
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + VV+WN ++S + ++G +EA VF +M RVE
Sbjct: 245 MLKRSVVSWNTMISGWFQNGRPEEALAVFNSMMDARVE 282
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y+ QVF + S N+ L + LF M + TF V+ A +
Sbjct: 439 YSFQVFAKTSMKRTVPWNALLSGLIHNELAREAVGLFKSMLIEEVEANHATFNSVIPAYA 498
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTW 145
L ++ +H+ +++ G S+ V T L+DMYSK G L + + F EI + KD++ W
Sbjct: 499 ILADLKQVMNLHSYLVRSGFISKIAVITGLIDMYSKCGSLDYAHKIFDEIPNKEKDIIVW 558
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ L++ + HG + A +F M ++
Sbjct: 559 SVLIAGYGMHGHGETAVLLFNQMVHSGMQ 587
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 28 YTHQVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
Y H++FDEI + D+ + + Y + LF M + + TFT VL A
Sbjct: 540 YAHKIFDEIPNKEKDIIVWSVLIAGYGMHGHGETAVLLFNQMVHSGMQPNEITFTSVLHA 599
Query: 86 CSALPAPERGKQVHALMIKGGTDSE-PVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVV 143
CS + G + MI+ S P T ++D+ + G L E+ + K + F ++
Sbjct: 600 CSHRGLVDDGLTLFKYMIENYPSSPLPNHYTCVVDLLGRAGRLDEAYDLIKSMPFQQNHS 659
Query: 144 TWNALLSSFLRH 155
W ALL + L H
Sbjct: 660 IWGALLGACLIH 671
>gi|410109987|gb|AFV61073.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
fucata]
Length = 368
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNSRNVEDALKIFEXINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 315 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 360
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD SHG DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SHGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEMDAYTLSSVISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +HAL+IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSLHALVIKKGLDEVTQISNALVSMYLKSNSRNVEDALKIFEXINVKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 231 TILTGLSQNGLSENALRLFQNI 252
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVXLFVGMEMDGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H ++K G + E V A + Y++ G + ++ F ++D+
Sbjct: 64 TLLNDAESYDLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKRVFDSSHGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 124 VTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEM 156
>gi|410110057|gb|AFV61108.1| pentatricopeptide repeat-containing protein 81, partial
[Xeroaloysia ovatifolia]
Length = 391
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ ++ DL S N+ L +++ LF +H
Sbjct: 198 ISNALISMYLKSNSRNVEDALKIFERVNVKDLVSWNTMLTGLSQNGLSENALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 258 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVSSALIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 ARESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERHIKL 363
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L + AYT + ++ AC GK +H
Sbjct: 125 DLVTWNSMLAAYLEHNLEECGFNIFLEMVRQSLEMDAYTLSSIISACFEDSQQSLGKSLH 184
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G D + AL+ MY K + ++++ F+ + KD+V+WN +L+ ++GL
Sbjct: 185 GLVIKKGLDEVTQISNALISMYLKSNSRNVEDALKIFERVNVKDLVSWNTMLTGLSQNGL 244
Query: 158 AKEAFGVFQ 166
++ A +FQ
Sbjct: 245 SENALRLFQ 253
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 13 NNVFKFMEERNTVSWNALIGGYAEMGNLERCIELFMRMEMDSVKIDDATFAPLLTLLCDA 72
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNAL 148
+ +Q+H ++K G + E V A + Y++ G + ++ F + ++D+VTWN++
Sbjct: 73 ELYDLTRQLHGKIMKCGLEHENTVLNATITAYAECGCIEDAKRVFNSSDGYRDLVTWNSM 132
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
L+++L H L + F +F M R+ +E
Sbjct: 133 LAAYLEHNLEECGFNIFLEMVRQSLEM 159
>gi|328774747|gb|AEB39773.1| pentatricopeptide repeat protein 43 [Funaria hygrometrica]
Length = 1073
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA + VF + D+ S N+ + Y LF M L
Sbjct: 148 CGSIEDA--------NNVFQAMEDKDVVSWNAMISGYALHGRDQEAADLFYQMQREGLKP 199
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF +L AC + A E G+Q+H+ + K G +S+ V TAL++MY K G L + + F
Sbjct: 200 NQNTFISILSACQSPIALEFGEQIHSRIAKAGYESDVNVSTALINMYCKCGSLELARKVF 259
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
E+ ++VV+W A++S +++HG ++EA +F+ + R ++
Sbjct: 260 NEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQ 299
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA VF + D+ N+ L +Y S LF M +N
Sbjct: 652 CGSLRDA--------ENVFSTVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGVNP 703
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T++ L AC+ L A E GK++HA + + G +++ V +L++MYS+ G L + + F
Sbjct: 704 DSSTYSTALNACARLTAVEHGKKIHAQLKEAGMETDTRVSNSLIEMYSRCGCLCSAKQVF 763
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ +D+ +WNAL++ + ++G A ++ M R +
Sbjct: 764 EKMLSRDINSWNALIAGYCQNGQGNIALEYYELMLRASI 802
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+A+A QVFD + + ++ N+ + Y + LF M
Sbjct: 350 CGSLANA--------RQVFDNLRSLNRTTWNAMIAGYGEGL-MEEAFRLFRAMEQKGFQP 400
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T+ +L C+ +RGK++H+ + G ++ V TAL+ MY+K G E+ + F
Sbjct: 401 DKFTYASLLAICADRADLDRGKELHSQIASTGWQTDLTVATALISMYAKCGSPEEARKVF 460
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ ++V++WNA +S RH L KEAF F+ M R+ V
Sbjct: 461 NQMPERNVISWNAFISCCCRHDLGKEAFQAFKQMRRDDV 499
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++ADA +VF I DL S N+ + + + + + LF S
Sbjct: 551 CGNLADA--------REVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSEGGKG 602
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
YTF VL A + L + G+ +H L+ KGG + V T L+ MYSK G L ++ F
Sbjct: 603 DKYTFINVLRAVANLEDLDAGRMIHGLVEKGGFGKDIRVLTTLIKMYSKCGSLRDAENVF 662
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ KDVV WNA+L+++ ++A +FQ M E V
Sbjct: 663 STVQEKDVVCWNAMLAAYAHSDRGQDALKLFQQMQLEGV 701
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ ++ S + + Y + + ALF + + + +F +LGAC+
Sbjct: 257 KVFNEMRERNVVSWTAMISGYVQHGDSREALALFRKLIRSGIQPNKVSFASILGACTNPN 316
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G ++HA + + G + E +V AL+ MYS+ G L + + F + + TWNA+++
Sbjct: 317 DLGEGLKLHAYIKQAGLEQEVLVGNALISMYSRCGSLANARQVFDNLRSLNRTTWNAMIA 376
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ GL +EAF +F+AM ++
Sbjct: 377 GY-GEGLMEEAFRLFRAMEQK 396
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+T +++A AL Y +VF+++ ++ S N+ + R + F
Sbjct: 434 QTDLTVATALISMYAKCGSPEEARKVFNQMPERNVISWNAFISCCCRHDLGKEAFQAFKQ 493
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M +N TF +L +C++ ERG+ +H + + G S V AL+ MY + G
Sbjct: 494 MRRDDVNPDHITFITLLNSCTSPEDLERGRYIHGKINQWGMLSNNHVANALISMYGRCGN 553
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
L ++ E F I +D+ +WNA++++ ++HG AF +F+ E
Sbjct: 554 LADAREVFYRIRRRDLGSWNAMIAANVQHGANGSAFDLFRKYRSE 598
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C + GK+VH M + + L+ MYSK G + ++ F+ +E KDV
Sbjct: 107 LQQCVLAKSLAEGKKVHDHMRSAQFKPDIYLNNMLISMYSKCGSIEDANNVFQAMEDKDV 166
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V+WNA++S + HG +EA +F M RE
Sbjct: 167 VSWNAMISGYALHGRDQEAADLFYQMQRE 195
>gi|302788580|ref|XP_002976059.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
gi|300156335|gb|EFJ22964.1| hypothetical protein SELMODRAFT_104710 [Selaginella moellendorffii]
Length = 699
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 80/150 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R T ++F+E+ D+ + N L +Y LF M + + T+T +LG
Sbjct: 428 RLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLG 487
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ + G++VH L+ + G DSE V AL+DM+ K LG + +AF+ I KD +
Sbjct: 488 ACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRAKDASS 547
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN L+++ ++G A+EA F M RE ++
Sbjct: 548 WNVLVAALAQNGDAEEALKQFLRMQREGIK 577
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 64/99 (64%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
+T L AC+ E G+++HAL+I+ G +SE VV AL+ MY+ G L +++E F+
Sbjct: 216 GFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQ 275
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++VV+WNA++++++ H KEAF +F M E V+
Sbjct: 276 KMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQ 314
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 9/167 (5%)
Query: 14 TCISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T IS+ +AL Y +VFD + H D+ S N+ + +Y ++ + LF M
Sbjct: 43 TQISVGNALVNMYGKCGSLALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAM 102
Query: 68 HSTC-LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYG 125
+ + TF V+ AC A E ++ AL+ + G DS+ V+ AL++MYSK G
Sbjct: 103 QEDGRIEPDSVTFVAVVSACCDPSALEAANRIFALVEERGLLDSDVVLGNALVNMYSKCG 162
Query: 126 LLGESVEAFKEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
L + F+ ++ + DVV W ++S + + G ++ A +FQ M +E
Sbjct: 163 SLKSATMVFERMKIRDDVVLWTTMISVYAQDGYSEAALELFQQMEKE 209
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+F L +C + + GK +H L+I+ G ++ V AL++MY K G L + E F +
Sbjct: 12 SFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVFDGM 71
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE-RVE 174
+ +DV++WNA+++++ + G KEA +FQAM + R+E
Sbjct: 72 DHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIE 109
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C ++ DAL + F +++ ++ S N+ + +Y + +F M +
Sbjct: 263 NCGTLQDAL--------ECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFYQMQLEGVQ 314
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLGESVE 132
+ TF L CS A E G + AL ++ +S + +V AL+ Y+K G L E
Sbjct: 315 PNSVTFVTFLSTCSTPAAFEDG-LIRALEVEKRVESLDALVGNALLHTYAKLGKLDEVQR 373
Query: 133 AFKEIEFK--DVVTWNALLSSFLRHGLAKEAF 162
F+ +E + DVVTWNA++ +R+G + A
Sbjct: 374 VFQRMEKQRDDVVTWNAVIEGSVRNGEFRNAL 405
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L+ Y G L ++ + F+E+E +DV+TWN +L +++ +AKEA +F+ M E E
Sbjct: 417 NGLLGAYIHVGRLADTRKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTE 476
>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 694
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 75/139 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD + + ++ + + +Y ++ F + LF M YTF +L AC+ +
Sbjct: 277 NVFDGLQNRNVVVWTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIA 336
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G +HA + K G + +V+ AL++MYSK G + S F ++ ++D++TWNA++
Sbjct: 337 ALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMIC 396
Query: 151 SFLRHGLAKEAFGVFQAMT 169
+ HGL K+A VFQ M
Sbjct: 397 GYSHHGLGKQALQVFQDMV 415
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 31 QVFDEI--SH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
QV D + H D+ S NS L + S + M C+ T+ V+G C+
Sbjct: 173 QVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCA 232
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + G +VHA +++GG + V + L+DMY K G + + F ++ ++VV W A
Sbjct: 233 QIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTA 292
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
L++++L++G +E+ +F M RE
Sbjct: 293 LMTAYLQNGYFEESLNLFTCMDRE 316
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 14/172 (8%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-- 67
IS ++L YV Q+ FD + ++ S N + Y N LF M
Sbjct: 50 ISHLNSLVHLYVKCGQLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVS 109
Query: 68 -HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
+ C N Y FT L ACS + G Q H L+ K G VK+AL+ MYS+
Sbjct: 110 LQNACPN--EYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSH 167
Query: 127 LGESVEAFKEI---EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ +++ + D+ ++N++L++ + G +EA V + M E V +
Sbjct: 168 VELALQVLDTVPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAW 219
>gi|356546180|ref|XP_003541509.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g66500, mitochondrial-like [Glycine max]
Length = 584
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ A TFT L A S L E G QVHA M+K G DS V KTAL+DM+SK G L E+ +
Sbjct: 132 VDACTFTSDLCASSLLHISELGTQVHAQMLKNGVDSGTVAKTALLDMFSKCGSLDEATKV 191
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
F E+ +D V W AL+S F R G EA GV + M RE VE
Sbjct: 192 FHEMLHRD-VAWIALVSCFSRCGRHAEAVGVLREMGRENVEL 232
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS +F R+R++ + + + LT+ L C GKQ+H ++++
Sbjct: 304 NSMVFRCVRNRSYDEAVRVMGLVRPNVVALTS-----ALVGCYENLDLWAGKQIHCVVVR 358
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G V L+DMY+K G + ++ F I KDV++W ++ + R+G EA +
Sbjct: 359 WGFTFXDSVVQCLIDMYAKCGRISHALSVFDGISEKDVISWTCMIDVYGRNGQGGEAVEM 418
Query: 165 FQAMTRE 171
FQ + +
Sbjct: 419 FQEIKED 425
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ H D++ + + + ++R + M + L+ +T L + ++L
Sbjct: 190 KVFHEMLHRDVAWI-ALVSCFSRCGRHAEAVGVLREMGRENVELSEFTSCSALKSGASLK 248
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALL 149
A E G+QVH L+++ G D V T L+D YS G + ++++ F ++ +K+ + +N+++
Sbjct: 249 ALELGRQVHGLVVRMGHDL-VVFSTTLVDFYSSVGCIDDALKVFYSLKGWKNDMMYNSMV 307
Query: 150 SSFLRHGLAKEAFGVF 165
+R+ EA V
Sbjct: 308 FRCVRNRSYDEAVRVM 323
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD +S + S N+ + YT +R LF MH +T +T + L AC+A
Sbjct: 112 RVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKY 171
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A KQ+H + IK DS V TA +D+Y+K ++ ++ F+ + K VTW++L +
Sbjct: 172 AIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFA 231
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
F+++GL +E +FQ+ RE ++
Sbjct: 232 GFVQNGLHEEVLCLFQSTQREGMQL 256
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 63/99 (63%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ LT +T + +L C++L G QVHA+++K G V T+L+D+Y+K G + +S
Sbjct: 254 MQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSY 313
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E F ++E K+VV WNA+++SF RH + EA +F+ M +
Sbjct: 314 EVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQ 352
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ +T +L C+ + GK H L I G ++ V L+++Y+K G +
Sbjct: 54 IDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + + +++WN +++ + + EA +F M RE
Sbjct: 114 FDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHRE 151
>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic-like [Glycine max]
Length = 691
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA H VFD++ NS + SY +L+ M + +
Sbjct: 267 CGSIEDA--------HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTV 318
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + V+ C+ L + E KQ HA +++ G ++ V TAL+D YSK+G + ++ F
Sbjct: 319 DHFTISIVIRICARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVF 378
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ K+V++WNAL++ + HG +EA +F+ M +E V
Sbjct: 379 NRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGV 417
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D++S + + + NF + LF M + + TF ++ A + L
Sbjct: 174 KLFDEMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLG 233
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQ+H+ +K G + V AL+DMYSK G + ++ F ++ K V WN++++
Sbjct: 234 LVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDAHCVFDQMPEKTTVGWNSIIA 293
Query: 151 SFLRHGLAKEAFGVFQAM 168
S+ HG ++EA ++ M
Sbjct: 294 SYALHGYSEEALSLYFEM 311
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A T+ ++ AC L + K+V MI G + + V ++ M+ K GL+ ++ + F
Sbjct: 118 ASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMNRVLFMHVKCGLMLDARKLFD 177
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E+ KDV +W ++ + G EAF +F M +E
Sbjct: 178 EMPEKDVASWMTMVGGLVDTGNFSEAFRLFLCMWKE 213
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF I + D+ + ++ L Y ++ A +F + + +TF+ +L C+A
Sbjct: 453 KVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATT 512
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +GKQ H IK DS V +AL+ MY+K G + + E FK KD+V+WN+++
Sbjct: 513 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMI 572
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +HG A +A VF+ M + +V+
Sbjct: 573 SGYAQHGQAMKALDVFKEMKKRKVK 597
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFDE+ ++ + + + Y R+ LF M ++TF LG +
Sbjct: 152 RNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEE 211
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG QVH +++K G D V +L+++Y K G + ++ F + E K VVTWN+++
Sbjct: 212 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 271
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S + +GL EA G+F +M V
Sbjct: 272 SGYAANGLDLEALGMFYSMRLNHVRL 297
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A R Y H +FD+ D S S LF ++R LF + + + F+
Sbjct: 42 ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL + L G+Q+H IK G + V T+L+D Y K + F E++ +
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+VVTW L+S + R+ L +E +F M E
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDE 192
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 13/161 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C+++ DAL ++F E G++ S + + + ++ LF M +
Sbjct: 347 CMAMLDAL--------RLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVR 398
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+T++ +L A + E VHA ++K + V TAL+D Y K G + E+ +
Sbjct: 399 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKV 454
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F I+ KD+V W+A+L+ + + G + A +F +T+ V+
Sbjct: 455 FSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVK 495
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+ + + NS + Y + +F M + L+ +F ++ C+ L
Sbjct: 255 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKE 314
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLS 150
+Q+H ++K G + ++TALM YSK + +++ FKE F +VV+W A++S
Sbjct: 315 LRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMIS 374
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
FL++ +EA G+F M R+ V
Sbjct: 375 GFLQNDGKEEAVGLFSEMKRKGV 397
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D S + + Y +S LF M L TFT L C+ + A
Sbjct: 351 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 410
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E GKQVH ++K G +S V AL+ MY K G + ++ F+ IE K+VV+WN +++ +
Sbjct: 411 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 470
Query: 153 LRHGLAKEAFGVFQAMTR 170
RHG KEA +F++M +
Sbjct: 471 ARHGFGKEALMLFESMKK 488
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +I DA Y+ VF+ I ++ S N+ + Y R LF M T +
Sbjct: 442 CGNIDDA----YI----VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILP 493
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL ACS ++G + M + G + T ++D+ + G L ++
Sbjct: 494 DDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNL 553
Query: 134 FKEIEFK-DVVTWNALLSSFLRHG 156
K + F+ D TW ALL + HG
Sbjct: 554 MKNMPFEPDAATWGALLGASRIHG 577
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 30/149 (20%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNF---------PATWALFCYMHSTCLNLTAYTFTP 81
++FDE+ + S N L +Y ++ A W L + C+ + Y
Sbjct: 163 EIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISW---NCM-MGGYVKRN 218
Query: 82 VLGACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
L + PER + MI G Y++ G L E+ F+E
Sbjct: 219 RLVDARGIFDRMPERDEVSWNTMISG---------------YAQNGELLEAQRLFEESPV 263
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DV TW A++S ++++G+ EA VF M
Sbjct: 264 RDVFTWTAMVSGYVQNGMLDEARRVFDGM 292
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F ++ +DVV+WNA+LS + ++G KEA +F M
Sbjct: 134 FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM 168
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 72/138 (52%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D S + + Y +S LF M L TFT L C+ + A
Sbjct: 270 FDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAAL 329
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E GKQVH ++K G +S V AL+ MY K G + ++ F+ IE K+VV+WN +++ +
Sbjct: 330 ELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGY 389
Query: 153 LRHGLAKEAFGVFQAMTR 170
RHG KEA +F++M +
Sbjct: 390 ARHGFGKEALMLFESMKK 407
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +I DA Y+ VF+ I ++ S N+ + Y R LF M T +
Sbjct: 361 CGNIDDA----YI----VFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILP 412
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL ACS ++G + M + G + T ++D+ + G L ++
Sbjct: 413 DDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNL 472
Query: 134 FKEIEFK-DVVTWNALLSSFLRHG 156
K + F+ D TW ALL + HG
Sbjct: 473 MKNMPFEPDAATWGALLGASRIHG 496
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 30/149 (20%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNF---------PATWALFCYMHSTCLNLTAYTFTP 81
++FDE+ + S N L +Y ++ A W L + C+ + Y
Sbjct: 82 EIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADWELISW---NCM-MGGYVKRN 137
Query: 82 VLGACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
L + PER + MI G Y++ G L E+ F+E
Sbjct: 138 RLVDARGIFDRMPERDEVSWNTMISG---------------YAQNGELLEAQRLFEESPV 182
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DV TW A++S ++++G+ EA VF M
Sbjct: 183 RDVFTWTAMVSGYVQNGMLDEARRVFDGM 211
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F ++ +DVV+WNA+LS + ++G KEA +F M
Sbjct: 53 FDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEM 87
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++F+ + D S NS + Y R+ + + LF M TF VLGAC
Sbjct: 315 VDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC 374
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ A G +H+ ++K G D+ +V TAL+DMYSK G L S F E+ K +V+W+
Sbjct: 375 DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWS 434
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ + HG +EA + M V
Sbjct: 435 AMVAGYGLHGRGREAISILDGMKANSV 461
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD ++ DL+S N+ + Y ++ + + +F M L T +L AC+ L A
Sbjct: 218 VFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKA 277
Query: 92 PERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H ++ + +L++MY + ++ F+ + +KD V+WN+++
Sbjct: 278 VKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMIL 337
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ R+G A E+ +F+ M
Sbjct: 338 GYARNGDAFESLRLFRRM 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 62 ALFCYMHSTCLNLTAYTFTP--VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
+L Y C A FT VL AC L E G++VH+ ++ G +S+ V +L+
Sbjct: 145 SLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDIYVGNSLLA 204
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
MY+K+G +G + F + +D+ +WN ++S + ++ + AF VF M +
Sbjct: 205 MYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGK 255
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 79/141 (56%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
H +FD IS +L N + Y + + +L+ M L +TF VL ACSA
Sbjct: 55 AHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSA 114
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A E GK++H +I+ G +S+ V AL+DMY+K G + + + F +I+ +DVV WN++
Sbjct: 115 LSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSM 174
Query: 149 LSSFLRHGLAKEAFGVFQAMT 169
L+++ ++G E+ + + M
Sbjct: 175 LATYSQNGQPDESLALCRVMA 195
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD+I D+ NS L +Y+++ + AL M L T TF + A +
Sbjct: 158 QVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNG 217
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H + G +S VKTALMDMY+K G + + F+ +E K VV+WNA+++
Sbjct: 218 LLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMIT 277
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG A EA +F+ M
Sbjct: 278 GYAMHGHANEALDLFKEM 295
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L +C A E GKQ+HA + + G P++ T L+++Y L + F I
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ WN ++ + +G + A ++ M
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQM 93
>gi|242069791|ref|XP_002450172.1| hypothetical protein SORBIDRAFT_05g001460 [Sorghum bicolor]
gi|241936015|gb|EES09160.1| hypothetical protein SORBIDRAFT_05g001460 [Sorghum bicolor]
Length = 521
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+E+ D+ + N+ + Y+++ + + +F M T TF VLGACS L
Sbjct: 222 IFEEMEGKDVVAYNAMVEGYSKTEDTAEGSLEVFKAMQQAGFRPTVSTFVSVLGACSLLS 281
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+PE G+QVH +K G + V +AL+DMY+K G + + F ++ ++V+TW +++
Sbjct: 282 SPELGEQVHCQGMKSGLVLDIKVGSALVDMYAKCGRVEDGRRIFNQMPERNVITWTSMID 341
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ ++GL++EA +F M RER
Sbjct: 342 GYGKNGLSEEALQLFAEM-RER 362
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
++VHA +++ S+ ++ AL+D Y K G L + + + VV AL+ +
Sbjct: 154 REVHARVLRSVAQSDEILFAALVDAYVKSGSLAYARRVHGAMPVRSVVCSTALVVGCMNE 213
Query: 156 GLAKEAFGVFQAM 168
GL ++A +F+ M
Sbjct: 214 GLFEDAEAIFEEM 226
>gi|410110025|gb|AFV61092.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
macrophylla]
Length = 372
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 80/145 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ I+ DL S N+ L +++ LF +H L YTF VL +CS L
Sbjct: 215 KIFEHINDKDLVSWNTILTGLSQNGLSEXALRLFQNIHLDHLVTDQYTFAAVLRSCSDLA 274
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H ++K G + V +AL+ MYSK G++ ++ E+F+ + VTWN+++
Sbjct: 275 TLQLGRQIHVXVVKSGFEGNEYVASALIFMYSKCGIIEDAWESFESSHKETSVTWNSIIF 334
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ +HG K A +F MT R++
Sbjct: 335 AYAQHGQGKIALDLFXLMTERRIKL 359
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 29 THQVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +VFD S G DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 109 SKRVFDS-SDGXRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEMDAYTLSSIISAC 167
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVT 144
GK +HAL+IK G D + AL+ MY K + ++++ F+ I KD+V+
Sbjct: 168 FEDTQQSLGKSLHALVIKKGLDEVTQIXNALVSMYLKSNSRNVEDALKIFEHINDKDLVS 227
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN +L+ ++GL++ A +FQ +
Sbjct: 228 WNTILTGLSQNGLSEXALRLFQNI 251
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF + + S N+ + Y N LF M + + TF P+L +
Sbjct: 9 NKVFKYMRERNAVSWNALIGGYAEMGNLERCVTLFVGMEMEGVRVDDATFAPLLTLLNDA 68
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNAL 148
+ + +Q+H ++K G + E V A + Y++ G + +S F + +D+VTWN++
Sbjct: 69 ESYDLARQLHGKIMKRGLEYENTVLNASITAYAECGCIEDSKRVFDSSDGXRDLVTWNSM 128
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
L+++L H L + F +F M R+R+E
Sbjct: 129 LAAYLEHNLEEYGFNIFLEMVRQRLEM 155
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++F+ + D++S N+ + Y+ + A F M + + T VL AC+ L
Sbjct: 276 HKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVSVLPACAHL 335
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+G+Q+H I+ G +S VV AL++MY+K G + + + F+ + K+VV WNA++
Sbjct: 336 FALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNSAYKLFERMPKKNVVAWNAII 395
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +HG EA +F M + ++
Sbjct: 396 SGYSQHGHPHEALALFIEMQAQGIK 420
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + D+ S N+ + Y+++ ALF M + + T V+ C+ L
Sbjct: 176 QVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLL 235
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+H I+ G +S+ +V L++MY+K G + + + F+ + +DV +WNA++
Sbjct: 236 ALEQGKQIHCYAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIG 295
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + EA F M
Sbjct: 296 GYSLNSQHHEALAFFNRM 313
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 77/139 (55%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+++F+ + ++ + N+ + Y++ + ALF M + + ++ VL AC+
Sbjct: 377 YKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHF 436
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+GKQ+H I+ G +S VV T L+D+Y+K G + + + F+ + +DVV+W ++
Sbjct: 437 LALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMI 496
Query: 150 SSFLRHGLAKEAFGVFQAM 168
++ HG ++A +F M
Sbjct: 497 LAYGIHGHGEDALALFSKM 515
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
+ Y ++ + L+ M T +N F V+ AC + + G++VH +I G
Sbjct: 92 IIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGF 151
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+S+ +V TAL MY+K G L + + F + +DVV+WNA+++ + ++G EA +F
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAGYSQNGQPYEALALFSE 211
Query: 168 M 168
M
Sbjct: 212 M 212
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++F+ + D+ S + + +Y + ALF M T L FT +L ACS
Sbjct: 478 QKLFERMPEQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHA 537
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
++G Q M K P ++ L+D+ + G L E+ K + + D W
Sbjct: 538 GLVDQGLQYFQCM-KSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWG 596
Query: 147 ALLSSFLRH 155
ALL + H
Sbjct: 597 ALLGACRIH 605
>gi|297824663|ref|XP_002880214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297326053|gb|EFH56473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 585
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 64 FCYMHSTCLN---LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
FCY+ + L+ L +F ++ C+ E G Q+H+L++K G +S + T+L+D
Sbjct: 127 FCYLSRSLLSEVILDHVSFIGLIRLCTDSTNVEAGNQLHSLIVKQGLESNCFLSTSLVDF 186
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
Y K GL+GE+ + F+ + +D+V WNAL+SS++ +G+ EAFG+ + M+ E+ F
Sbjct: 187 YGKCGLIGEARQVFEAVLVRDLVLWNALVSSYVLNGMIDEAFGLLKLMSSEKNGF 241
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA--YTFTPVLGACSA 88
QVF+ + DL N+ + SY + + L M S T +T + +L AC
Sbjct: 198 QVFEAVLVRDLVLWNALVSSYVLNGMIDEAFGLLKLMSSEKNGFTGDDFTLSSLLSAC-- 255
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
++GKQ+HA++ K + V TAL++MY+K + ++ + F+ + +++V+WNA+
Sbjct: 256 --GIKQGKQIHAIVFKLSYLFDIPVATALVNMYAKSNHMSDAHKCFESMVVRNIVSWNAM 313
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F ++G +EA +F M RE ++
Sbjct: 314 IVGFGQNGEGREAMRLFGQMLRENLQ 339
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 16 ISIADALPKRYVYT------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +A AL Y + H+ F+ + ++ S N+ + + ++ LF M
Sbjct: 276 IPVATALVNMYAKSNHMSDAHKCFESMVVRNIVSWNAMIVGFGQNGEGREAMRLFGQMLR 335
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L TF VL +C+ A KQV A++ K G+ V +L+ YS+ G L E
Sbjct: 336 ENLQPDELTFASVLCSCTKFSAIWEIKQVQAMVTKKGSAEFLSVANSLISSYSRTGNLSE 395
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ F I D+V+W +++ + HG A+E+ +F++M ++
Sbjct: 396 ALLCFHSIREPDLVSWTSVIGALASHGFAEESLRIFESMLQK 437
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
KQ H M+K GT + + L+ Y+K ++ + F E+ +++VTWN L+
Sbjct: 56 KQKHGFMVKQGTYNSLFFQNKLLQAYTKIREFDDADKLFDEMLVRNIVTWNILI 109
>gi|410110043|gb|AFV61101.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
velutina]
Length = 357
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 180 ISNALISMYLKSNSRNVEDALKIFEHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 239
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 240 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 299
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 300 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 345
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y +F M L + AYT + V+ AC
Sbjct: 97 RVFDS-SDGFRDLVTWNSMLAAYLEHNLEEYGLNIFLEMVRQRLEMDAYTLSSVISACFE 155
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 156 DTQQSLGKSLHGFVIKKGLDEVTQISNALISMYLKSNSRNVEDALKIFEHINVKDLVSWN 215
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 216 TILTGLSQNGLSENALRLFQNI 237
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 68/133 (51%), Gaps = 1/133 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N ALF M + + TF P+L + + + +Q+H +
Sbjct: 8 SWNALIGGYAEMGNLERCVALFVGMEMEGVGVDDATFAPLLTLLNDAXSYDLTRQLHGKI 67
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V A + Y++ G + ++ F + F+D+VTWN++L+++L H L +
Sbjct: 68 MKRGLEYENTVLNATITAYAECGXIEDAKRVFDSSDGFRDLVTWNSMLAAYLEHNLEEYG 127
Query: 162 FGVFQAMTRERVE 174
+F M R+R+E
Sbjct: 128 LNIFLEMVRQRLE 140
>gi|255587181|ref|XP_002534168.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525755|gb|EEF28217.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 513
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +FD + D S ++ + Y ++ L+ M +L +FT VL AC+
Sbjct: 354 HARNLFDRMPQRDSISWSAMIAGYVQNGCNEEAVHLYVEMKRDGESLNRSSFTSVLTACA 413
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ A + GKQ H ++K G + V AL+ MY K G + E+ +AF EI KD+++WN
Sbjct: 414 DIAALDLGKQFHGWLVKVGYQTGCYVGNALLAMYCKCGSIDEADDAFHEITDKDLISWNT 473
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + RHG KEA VF++M
Sbjct: 474 MIYGYARHGFGKEALIVFESM 494
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V ++ Y++ G L E+ + F+E +DV TW A++S ++++G+ EA +F M
Sbjct: 242 DEVSWNTMITGYAQNGELEEARKLFEESPTQDVFTWTAMVSGYVQNGMVDEARSIFDKM 300
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V A++ Y G + E F ++ +D+ TWN +LS ++R+ +A G+F+ M R
Sbjct: 89 VTYNAMISGYLSNGRFDLAREMFDKMPERDLFTWNVMLSGYVRNKNLTDARGLFERMPRR 148
Query: 172 RV 173
V
Sbjct: 149 DV 150
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
Y +VFDE+ ++ + + + Y +SR F +F M + + T + VL A
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ + A RG++VH MIK + T L+D+Y K G L E++ F+ + K+V TW
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ F HG A++AF +F M V
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHV 403
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +TF P+L A L Q HA ++K G DS+P V+ +L+ YS GL + F
Sbjct: 103 SRHTFPPLLKAVFKL-RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLF 161
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E KDVVTW A++ F+R+G A EA F M + V
Sbjct: 162 DGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGV 200
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD D+ + + + + R+ + F M T + T VL A
Sbjct: 156 FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAG 215
Query: 88 ALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G+ VH L ++ G + + ++L+DMY K ++ + F E+ ++VVTW
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
AL++ +++ + VF+ M + V
Sbjct: 276 ALIAGYVQSRCFDKGMLVFEEMLKSDV 302
>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
sativa Japonica Group]
gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 702
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 14 TCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T I +++AL Y T V ++I + DL S + + + ++ AL C M
Sbjct: 344 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 403
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
HS Y F+ VL +C+ + + ++G Q H L +K G DSE AL++MYSK G +
Sbjct: 404 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 463
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + AF + DV +WN+L+ +HG A +A VF M
Sbjct: 464 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 504
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 18 IADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY 77
+ADAL +FD + ++ + S + YTR+ A A+F M + + +
Sbjct: 64 LADAL--------DLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDF 115
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
L AC+ L A G+QVH+L ++ G + + + L++MYS+ G L + E F +
Sbjct: 116 ACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175
Query: 138 EFKDVVTWNALLSSFLRHG---LAKEAF 162
+ DVV + +L+S+F R+G LA EA
Sbjct: 176 DSPDVVGYTSLISAFCRNGEFELAAEAL 203
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + ++ R+ F M L +T T +L AC +
Sbjct: 170 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV- 228
Query: 91 APERGKQVHALMIKG-GTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
G+Q+H +IK G S+ V TAL+D YS+ G + F + K+VV+W ++
Sbjct: 229 ---LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++R G +EA VF M E V+
Sbjct: 286 MQLYIRDGRLEEALQVFGDMISEGVD 311
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + ++ S S + Y R +F M S ++ + + VLGAC ++
Sbjct: 270 VFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL 329
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q+H IK ++ V AL+ MY + GL+ E +IE D+V+W +S+
Sbjct: 330 ---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISA 386
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++G ++A + M E
Sbjct: 387 NFQNGFGEKAIALLCQMHSE 406
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +AL Y Q+ FD + D++S NS + + + + +F M S
Sbjct: 447 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 506
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLG 128
+ TF VL C+ E G+ LMI + P ++DM + G
Sbjct: 507 NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFD 566
Query: 129 ESVEAFKEIEFK-DVVTWNALLSSFLRH 155
E++ ++ F+ D + W LL+S H
Sbjct: 567 EALRMINDMPFEPDALIWKTLLASCKLH 594
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
Y +VFDE+ ++ + + + Y +SR F +F M + + T + VL A
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ + A RG++VH MIK + T L+D+Y K G L E++ F+ + K+V TW
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ F HG A++AF +F M V
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHV 403
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +TF P+L A L Q HA ++K G DS+P V+ +L+ YS GL + F
Sbjct: 103 SRHTFPPLLKAVFKL-RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLF 161
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E KDVVTW A++ F+R+G A EA F M + V
Sbjct: 162 DGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGV 200
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD D+ + + + + R+ + F M T + T VL A
Sbjct: 156 FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAG 215
Query: 88 ALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G+ VH L ++ G + + ++L+DMY K ++ + F E+ ++VVTW
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
AL++ +++ + VF+ M + V
Sbjct: 276 ALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDM 120
LF M S+ ++ TF VL AC+ E G+++ L +KG + EP ++D+
Sbjct: 394 LFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMVDL 452
Query: 121 YSKYGLLGESVEAFKEIEFKDV-VTWNALLSSFLRH 155
+ + GLL E+ + + + V W AL S L H
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
>gi|410110007|gb|AFV61083.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
brasiliensis]
Length = 357
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 8/163 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ + F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALISMYLKSNSRNVEDALKTFEHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ E+F+ + VTWN+++ ++ +HG K A +F MT R
Sbjct: 315 AWESFESSHKETSVTWNSIIXAYAQHGQGKXALDLFYLMTERR 357
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 29 THQVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +VFD S G DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 110 SKRVFDS-SDGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEMDAYTLSSIISAC 168
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVT 144
GK +HA +IK G D + AL+ MY K + ++++ F+ I KD+V+
Sbjct: 169 FEDTQQSLGKSLHAFVIKKGLDEVTQISNALISMYLKSNSRNVEDALKTFEHINVKDLVS 228
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN +L+ ++GL++ A +FQ +
Sbjct: 229 WNTILTGLSQNGLSENALRLFQNI 252
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y B LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGBLERCITLFVXMEMEGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V + + Y++ G + +S F + ++D+
Sbjct: 64 TLLXDAESYDLXRQLHGKIMKRGLEXENTVLNSTITAYAECGCIEDSKRVFDSSDGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 124 VTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEM 156
>gi|218194084|gb|EEC76511.1| hypothetical protein OsI_14286 [Oryza sativa Indica Group]
Length = 656
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 14 TCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T I +++AL Y T V ++I + DL S + + + ++ AL C M
Sbjct: 298 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 357
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
HS Y F+ VL +C+ + + ++G Q H L +K G DSE AL++MYSK G +
Sbjct: 358 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 417
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + AF + DV +WN+L+ +HG A +A VF M
Sbjct: 418 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 458
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 18 IADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY 77
+ADAL +FD + ++ + S + TR+ A A+F M + + +
Sbjct: 64 LADAL--------DLFDRMPRKNVVAWTSVMSGCTRNGRPEAALAMFADMVESGVAPNDF 115
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
L AC+ L A G+QVH+L ++ G + + + L++MYS+ G L + E F +
Sbjct: 116 ACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175
Query: 138 EFKDVVTWNALLSSFLRHG---LAKEAF 162
+ DVV + +L+S+F R+G LA EA
Sbjct: 176 DSPDVVGYTSLISAFCRNGEFELAAEAL 203
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
Y + ++ + + VLGAC ++ G+Q+H IK ++ V AL+ MY + G
Sbjct: 258 YSRNEGVDPNEFALSIVLGACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRTG 314
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
L+ E +IE D+V+W +S+ ++G ++A + M E
Sbjct: 315 LVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQMHSE 360
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +AL Y Q+ FD + D++S NS + + + + +F M S
Sbjct: 401 ICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRS 460
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLG 128
+ TF VL C+ E G+ LMI + P ++DM + G
Sbjct: 461 NGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFD 520
Query: 129 ESVEAFKEIEFK-DVVTWNALLSSFLRH 155
E++ ++ F+ D + W LL+S H
Sbjct: 521 EALRMINDMPFEPDALIWKTLLASCKLH 548
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 83/164 (50%), Gaps = 6/164 (3%)
Query: 18 IADALPKRYV---YTHQ---VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
I +L K Y Y H +FDE+ D N L Y ++ +F + F M ++C
Sbjct: 214 IGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSC 273
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + +F +L C+ G Q+H L+I+ G +S+P V ++ MYSK G L ++
Sbjct: 274 VKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDAR 333
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + D VTWN L++ ++++G EA +F+AM V+
Sbjct: 334 KIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKL 377
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 74/150 (49%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +Q F + D N + S++++ LF M ++ + + + L
Sbjct: 530 RLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLS 589
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ PA GK++H +++ S+ V + L+DMYSK G L + F +++K+ V+
Sbjct: 590 ACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVS 649
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN++++++ HG +E +F M ++
Sbjct: 650 WNSIIAAYGNHGRPRECLDLFHEMVEAGIQ 679
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL AC+AL + + GK++H ++K G ++ V +++ MY+K G L + + F+ +
Sbjct: 482 TMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRM 541
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
KD V WN ++ SF ++G + A +F+ M +F
Sbjct: 542 PVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKF 579
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 73/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D + N + Y ++ ALF M ++ + L + TF L +
Sbjct: 334 KIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSG 393
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + K+VH+ +++ G + +K+AL+D+Y K G + + + F++ DV A++S
Sbjct: 394 SLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMIS 453
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ +GL EA +F+ + +E
Sbjct: 454 GYVLNGLNVEALNLFRWLIQE 474
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L K VH L G + + ++L+ +Y+ G + ++ F E
Sbjct: 178 YTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDE 237
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +D + WN +L+ ++++G A G FQ M V+
Sbjct: 238 LPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVK 275
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 79/139 (56%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +F+ ++ N L +Y + + ++ +F M +T ++ +T+ +L C+
Sbjct: 300 HDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCT 359
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+Q+H+L IK G +S+ V L+DMYSKYG L ++ + + +E +DVV+W +++
Sbjct: 360 GQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMI 419
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ +++H +EA F+ M
Sbjct: 420 AGYVQHDFCEEALATFKEM 438
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F EI H D + N + + +SR + +F M +TF + A + L
Sbjct: 504 LFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLAD 563
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++GKQVH +K G SE V AL+ +Y K G + ++ F E+ ++ V+WN +++S
Sbjct: 564 IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS 623
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+HG EA +F M +E
Sbjct: 624 CSQHGRGLEALDLFDQMKQE 643
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ + + D+ S S + Y + A F M + AC+ +
Sbjct: 402 KILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIK 461
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G Q+HA + G ++ + L+++Y++ G E+ F+EIE KD +TWN L+S
Sbjct: 462 AMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLIS 521
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
F + L K+A VF M + ++
Sbjct: 522 GFGQSRLYKQALMVFMKMGQAGAKY 546
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 66/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF E+S D S + L Y +S + L+ MH T + T Y + VL AC+
Sbjct: 99 QVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGK 158
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+G+ +HA + K SE V AL+ +Y +G + F ++ F D VT+N L+S
Sbjct: 159 LFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLIS 218
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G + A +F M
Sbjct: 219 GHAQCGHGECALQIFDEM 236
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA + G ++ ++ L+D+Y+K GL+ ++ + FKE+ +D V+W A+LS + + G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 157 LAKEAFGVFQAM 168
L KEAF ++ M
Sbjct: 124 LGKEAFRLYSQM 135
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ D + N+ + + + + +F M + L T +L AC+++
Sbjct: 200 RVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVG 259
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++GKQ+H+ ++K G + + + +L+D+Y K G + + + F + +VV WN +L
Sbjct: 260 DLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLV 319
Query: 151 SFLR-HGLAK--EAFGVFQA 167
++ + LAK E FG QA
Sbjct: 320 AYGQISDLAKSFEIFGQMQA 339
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
Y + ++F + + +TF+ ++ AC+ A E+G Q+HA ++K D
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 342
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+P V + L+DMY K GLL ++++AF EI + WN+L+S F +HGL K+A +F+ M
Sbjct: 343 DPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMV 402
Query: 170 RERVE 174
V+
Sbjct: 403 DRGVK 407
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + +L S + + +++ F FC M T + F+ + AC++L
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E GKQ+H L +K G SE V + L DMYSK G + ++ + F+E+ KD V+W A++
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + G +EA F+ M E V
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEV 203
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D S + + Y++ F F M + + + LGAC AL
Sbjct: 162 KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALK 221
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK-EIEFKDVVTWNALL 149
A + G+ VH+ ++K G +S+ V AL DMYSK G + + F + E ++VV++ L+
Sbjct: 222 ACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLI 281
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++ VF + R+ +E
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIE 306
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
RGKQ+HAL+I G + L++MYSK G L +++ F + +++V+W A++S
Sbjct: 23 RGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLS 82
Query: 154 RHGLAKEAFGVFQAM 168
++ EA F M
Sbjct: 83 QNSKFSEAIRTFCGM 97
>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 922
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 80/156 (51%), Gaps = 8/156 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA + VF + D+ S N+ + Y LF M L
Sbjct: 99 CGSIEDA--------NNVFQSMEDKDVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKP 150
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+F +L AC E G+Q+H+ + K G +S+ V TAL++MY K G L + + F
Sbjct: 151 NQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVSTALINMYCKCGSLELARKVF 210
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E+ ++VV+W A++S +++HG +KEAF +FQ + R
Sbjct: 211 NEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIR 246
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+A+A QVFD + + S N+ + Y + LF M
Sbjct: 301 CGSLANA--------RQVFDNLRSPNRVSWNAMIAGYGEGF-MEEAFRLFRDMQQKGFQP 351
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T+ +L C+ RGK++H+ +++ +++ V TAL+ MY+K G L E+ + F
Sbjct: 352 DRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVF 411
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ K+ V+WNA ++ RHG KEAF VF+ M R+ V
Sbjct: 412 NQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDV 450
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +ADA +VF I DL S N+ + +Y + + + LF S
Sbjct: 502 CGKLADA--------REVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKG 553
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
YTF VL A + L + G+++H L+ K G + + + T L+ MYSK G L ++ F
Sbjct: 554 DKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVF 613
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K ++ KDVV WNA+L+++ ++A +FQ M E V
Sbjct: 614 KNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGV 652
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ ++ S + + Y + + + LF + + +F +LGAC+
Sbjct: 208 KVFNEMRERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPN 267
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+G ++HA + + G + E +V AL+ MY++ G L + + F + + V+WNA+++
Sbjct: 268 DLEQGLKLHAYIKQAGLEQEVLVGNALISMYARCGSLANARQVFDNLRSPNRVSWNAMIA 327
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ G +EAF +F+ M ++
Sbjct: 328 GY-GEGFMEEAFRLFRDMQQK 347
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+++A AL Y +VF+++ + S N+ + R + + +F M
Sbjct: 388 VTVATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRR 447
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ TF +L +C++ ERG+ +H + + G S +V AL+ MY + G L +
Sbjct: 448 DDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLAD 507
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ E F I +D+ +WNA+++++++HG AF +F
Sbjct: 508 AREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLF 543
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C + GK+VH M + + + L+ MYSK G + ++ F+ +E KDV
Sbjct: 58 LQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSKCGSIEDANNVFQSMEDKDV 117
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V+WNA++S + HG +EA +F M RE
Sbjct: 118 VSWNAMISGYALHGRGQEAVDLFYQMQRE 146
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 12/151 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA + VF + D+ N+ L +Y S + LF M +N
Sbjct: 603 CGSLRDA--------YSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNP 654
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES-VEA 133
+ T+T VL AC+ L A E GK+ H + + +++ ++ + LL E+
Sbjct: 655 DSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFI 714
Query: 134 FKEIEFKDVVTWNALLSSFLRH---GLAKEA 161
+ D + W +LL + H GLA+ A
Sbjct: 715 EEISSESDALMWESLLVACRIHHNVGLAETA 745
>gi|108712052|gb|ABF99847.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1221
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 14 TCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T I +++AL Y T V ++I + DL S + + + ++ AL C M
Sbjct: 271 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 330
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
HS Y F+ VL +C+ + + ++G Q H L +K G DSE AL++MYSK G +
Sbjct: 331 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 390
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + AF + DV +WN+L+ +HG A +A VF M
Sbjct: 391 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 431
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 46 SQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG 105
S + YTR+ A A+F M + + + L AC+ L A G+QVH+L ++
Sbjct: 11 SVMSGYTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRA 70
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG---LAKEAF 162
G + + + L++MYS+ G L + E F ++ DVV + +L+S+F R+G LA EA
Sbjct: 71 GFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEAL 130
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + ++ R+ F M L +T T +L AC +
Sbjct: 97 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV- 155
Query: 91 APERGKQVHALMIKG-GTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
G+Q+H +IK G S+ V TAL+D YS+ G + F + K+VV+W ++
Sbjct: 156 ---LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 212
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++R G +EA VF M E V+
Sbjct: 213 MQLYIRDGRLEEALQVFGDMISEGVD 238
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + ++ S S + Y R +F M S ++ + + VLGAC ++
Sbjct: 197 VFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL 256
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q+H IK ++ V AL+ MY + GL+ E +IE D+V+W +S+
Sbjct: 257 ---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISA 313
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++G ++A + M E
Sbjct: 314 NFQNGFGEKAIALLCQMHSE 333
Score = 39.3 bits (90), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D++S NS + + + + +F M S + TF VL C+
Sbjct: 397 FDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMV 456
Query: 93 ERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
E G+ LMI + P ++DM + G E++ ++ F+ D + W LL+
Sbjct: 457 EEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 516
Query: 151 SFLRH 155
S H
Sbjct: 517 SCKLH 521
>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 472
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF I D+ + ++ L Y ++ A +F + + +TF+ +L C+A
Sbjct: 53 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 112
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +GKQ H IK DS V +AL+ MY+K G + + E FK KD+V+WN+++
Sbjct: 113 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 172
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S + +HG A +A VF+ M + +V+
Sbjct: 173 SGYAQHGQAMKALDVFKEMKKRKVKM 198
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T++ +L A + E VHA ++K + V TAL+D Y K G + E+ + F
Sbjct: 2 FTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSG 57
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I+ KD+V W+A+L+ + + G + A +F +T+
Sbjct: 58 IDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 91
>gi|410109957|gb|AFV61058.1| pentatricopeptide repeat-containing protein 81, partial
[Acantholippia salsoloides]
Length = 402
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N L +++ LF +H
Sbjct: 198 ISNALISMYLKSNSRNVEDSLKIFEHINVKDLVSWNXILTGLSQNGLSENALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 258 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 AQESFESSHKETSVTWNSIIFAYAQHGQGKVALDLFYLMTERHIKL 363
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 3/143 (2%)
Query: 29 THQVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VFD + +GDL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 113 SKRVFDSSNGYGDLVTWNSMLAAYIEHNLEECGFNIFLEMVRQRLEMDAYTLSSIISACF 172
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTW 145
GK +H L+IK G D + AL+ MY K + +S++ F+ I KD+V+W
Sbjct: 173 EDSQQSLGKSLHGLVIKKGLDQVTQISNALISMYLKSNSRNVEDSLKIFEHINVKDLVSW 232
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
N +L+ ++GL++ A +FQ +
Sbjct: 233 NXILTGLSQNGLSENALRLFQNI 255
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 7 RRVKDANKVFKYMQERNAVSWNALIGGYAEMGNLQRCIELFICMEMEGVKMDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + +S F + D+
Sbjct: 67 TLLHDAESYDLTRQLHGKIMKRGLEHENTVLNATITAYAECGCIEDSKRVFDSSNGYGDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L++++ H L + F +F M R+R+E
Sbjct: 127 VTWNSMLAAYIEHNLEECGFNIFLEMVRQRLEM 159
>gi|147862347|emb|CAN84022.1| hypothetical protein VITISV_004991 [Vitis vinifera]
Length = 566
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 72/135 (53%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + N+ + +T+S W LF M + T T +L AC + + RGK++H
Sbjct: 261 DLVTWNAMISGFTQSLKAVEAWRLFQDMXVAGIKPNQVTVTGLLPACGLMGSIHRGKELH 320
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
L+ + G D V TAL+D YSK G + ++ + F I K+V +WNA++ + +HGL
Sbjct: 321 GLIYRMGXDMNVFVATALIDXYSKCGTVKDAWDVFDRIPIKNVASWNAMIGCYGKHGLVD 380
Query: 160 EAFGVFQAMTRERVE 174
+ +F+ M E ++
Sbjct: 381 SSIQLFERMQAEGMQ 395
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M + +TF+ VL C L +GK+VH ++ + G + V + +DMY K
Sbjct: 114 FSLMQELGIVANKFTFSIVLKQCVGLMDFNKGKEVHCVISRTGLGNVVSVANSXIDMYCK 173
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G +G + F + +DVV+W +++ + G +EA +F+ M E +E
Sbjct: 174 CGHVGYGRKVFDGMIERDVVSWTSMICGYCNIGTLEEALVLFERMKVEGLE 224
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEF 139
P C A + GKQVHA+++ D + + + L+ MY+ G L + + +
Sbjct: 29 PTXKKCLKCKALQPGKQVHAMLLASRIDMNILSMSSKLVGMYASCGDLQSARLVLERTQN 88
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+V +N ++S+ HG +EA G F M
Sbjct: 89 PNVFAFNWMVSALAFHGYHEEAIGYFSLM 117
>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
Length = 616
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
Y + ++F + + +TF+ ++ AC+ A E+G Q+HA ++K D
Sbjct: 218 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 277
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+P V + L+DMY K GLL ++++AF EI + WN+L+S F +HGL K+A +F+ M
Sbjct: 278 DPFVSSILVDMYGKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMV 337
Query: 170 RERVE 174
V+
Sbjct: 338 DRGVK 342
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 71/134 (52%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
+L S + + +++ F FC M T + F+ + AC++L + E GKQ+H
Sbjct: 5 NLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMH 64
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
L +K G SE V + L DMYSK G + ++ + F+E+ KD V+W A++ + + G +
Sbjct: 65 CLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFE 124
Query: 160 EAFGVFQAMTRERV 173
EA F+ M E V
Sbjct: 125 EALLAFKKMIDEEV 138
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D S + + Y++ F F M + + + LGAC AL
Sbjct: 97 KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALK 156
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK-EIEFKDVVTWNALL 149
A + G+ VH+ ++K G +S+ V AL DMYSK G + + F + E ++VV++ L+
Sbjct: 157 ACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLI 216
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++ VF + R+ +E
Sbjct: 217 DGYVETEQIEKGLSVFVELRRQGIE 241
>gi|449453244|ref|XP_004144368.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Cucumis sativus]
Length = 735
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I I +AL Y QVF EI+ ++ S N+ ++ + + F +
Sbjct: 424 IEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIYGFLLNGLPLQALEHFSKLIM 483
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ L + +T + VL C+ + + GKQ+H +++ G SE + L+ MYSK GLLG
Sbjct: 484 SKLKPSTFTLSIVLSICANISTLDIGKQIHGYILRSGNSSETSLCNGLITMYSKCGLLGW 543
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S+ F + +D+V+WN+++S++ +HG KEA F+AM
Sbjct: 544 SLRTFNVMIERDIVSWNSIISAYAQHGQGKEAVDCFKAM 582
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F M CL+ T TF ++ +CS + + +QVH+ IK G +S +V + + MY+
Sbjct: 281 MFKDMKRACLSPTELTFVSIMSSCSII---QVAQQVHSQAIKLGFESFTLVGNSTITMYT 337
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
G + F+ + KD+++WNA++SS+++ K A F M R
Sbjct: 338 SCGEFQAANAVFQMLIEKDLISWNAIISSYVQGNFGKSAVLAFLQMQR 385
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWAL-FCYMHSTCLNLTAYTFTPVLGACSALP 90
VF + DL S N+ + SY + NF + L F M T + +TF +LG +
Sbjct: 348 VFQMLIEKDLISWNAIISSYVQG-NFGKSAVLAFLQMQRTGIGPDEFTFGSLLGVSEFIE 406
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E VHA + K G + AL+ Y+K + +S++ F EI K++++WN ++
Sbjct: 407 IVE---MVHAYVYKNGLILIIEILNALVSAYAKCRKVKQSLQVFSEINSKNIISWNTVIY 463
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
FL +GL +A F + +++
Sbjct: 464 GFLLNGLPLQALEHFSKLIMSKLK 487
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 35 EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTA--YTFTPVLGACSALPA 91
E + DL N L RS + + LF +HS+ C N+ Y + L C+
Sbjct: 16 ESASQDLLEYNRLLAELKRSSRYIDSLQLFTQIHSSHCFNIKPDHYNLSTTLAVCANFRD 75
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q+H I+ G P V ++ +Y+K F+EIE DV +W LLS+
Sbjct: 76 IAFGSQLHGYAIRSGLKFYPHVANTVLSLYAKIEDFVSLKRGFQEIEKPDVYSWTTLLSA 135
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ G + A +F M + V
Sbjct: 136 CTKMGHIEYASEMFDIMPKGNV 157
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 3/145 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++FD + G+++ N+ + S F MH + Y+F +L C+
Sbjct: 144 YASEMFDIMPKGNVACWNAMITGSAESGLDWVAMNTFYEMHKMGVKPDNYSFACILSLCT 203
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK--EIEFKDVVTW 145
+ G+QVH+ +IK G + V AL+ MY L ++ E F+ E E +D +T+
Sbjct: 204 K-EIEDLGRQVHSSVIKAGYLRKTSVVNALITMYFSIENLEDAYEVFEGTESEVRDQITY 262
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N ++ + +EA +F+ M R
Sbjct: 263 NVMIDGLVCVRRNEEALIMFKDMKR 287
>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
Length = 818
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 76/131 (58%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ S N + Y ++ +F L+ + T TF +LGACS++
Sbjct: 263 EVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+ VH+ +++ G DSE V TAL++MY+K G L E+ + F ++ +D V W+ L+
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 151 SFLRHGLAKEA 161
++ +G K+A
Sbjct: 383 AYASNGYGKDA 393
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Query: 17 SIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
S+A+AL Y ++F + D +S N+ + ++++S ++ +F M
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD 202
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
+ + T+ V+ S G+++HA ++ G DS+ VV TAL++MY K G E+
Sbjct: 203 -MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDSDLVVATALINMYGKCGSSHEA 261
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E F +++ +D+V+WN ++ ++++G EA ++Q + E
Sbjct: 262 REVFDKMKKRDMVSWNVMIGCYVQNGDFHEALELYQKLDME 302
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSAL 89
+VFD + D N+ + +Y ++ A +F M L A TF VL AC++L
Sbjct: 398 KVFDRLGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASL 457
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K +HA + + +S VV L++MY++ G L E+ F + K VV+W A++
Sbjct: 458 GRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV 517
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
++F ++G EA +FQ M E V+
Sbjct: 518 AAFSQYGRYAEALDLFQEMDLEGVK 542
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 5 IRMTNFPAKTCISIADALPKRY------VYTHQVFDEIS--HGDLSSLNSQLFSYTRSRN 56
IR + F T + +AL Y V VF+ + ++ S N+ + +Y ++ +
Sbjct: 33 IRCSRFERDTMV--GNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGH 90
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
L+ M+ L TF VLGACS+L +G+++H + G DS + A
Sbjct: 91 STEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANA 147
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L+ MY+++G +G++ F+ ++ +D +WNA++ + + G A +F+ M
Sbjct: 148 LVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM 199
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL +CS+ G+ +H + + + +V AL+ MY K L ++ F+ +
Sbjct: 9 TFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 138 EF--KDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
++ ++VV+WNA+++++ ++G + EA ++ M
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMN 102
>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
Length = 1135
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 82/161 (50%), Gaps = 6/161 (3%)
Query: 14 TCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T I +++AL Y T V ++I + DL S + + + ++ AL C M
Sbjct: 344 TDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQNGFGEKAIALLCQM 403
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
HS Y F+ VL +C+ + + ++G Q H L +K G DSE AL++MYSK G +
Sbjct: 404 HSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTGNALINMYSKCGQM 463
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + AF + DV +WN+L+ +HG A +A VF M
Sbjct: 464 GSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKM 504
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 11/148 (7%)
Query: 18 IADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY 77
+ADAL +FD + ++ + S + YTR+ A A+F M + + +
Sbjct: 64 LADAL--------DLFDRMPRKNVVAWTSVMSGYTRNGRPEAALAMFADMVESGVAPNDF 115
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
L AC+ L A G+QVH+L ++ G + + + L++MYS+ G L + E F +
Sbjct: 116 ACNAALVACADLGALRAGEQVHSLAVRAGFAGDAWIGSCLIEMYSRCGSLPAAKEVFDRM 175
Query: 138 EFKDVVTWNALLSSFLRHG---LAKEAF 162
+ DVV + +L+S+F R+G LA EA
Sbjct: 176 DSPDVVGYTSLISAFCRNGEFELAAEAL 203
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 6/146 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + ++ R+ F M L +T T +L AC +
Sbjct: 170 EVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTILTACPRV- 228
Query: 91 APERGKQVHALMIKG-GTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
G+Q+H +IK G S+ V TAL+D YS+ G + F + K+VV+W ++
Sbjct: 229 ---LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNGEFKLAKAVFDSLHCKNVVSWCSM 285
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++R G +EA VF M E V+
Sbjct: 286 MQLYIRDGRLEEALQVFGDMISEGVD 311
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + ++ S S + Y R +F M S ++ + + VLGAC ++
Sbjct: 270 VFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLGACGSIGL 329
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q+H IK ++ V AL+ MY + GL+ E +IE D+V+W +S+
Sbjct: 330 ---GRQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISA 386
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++G ++A + M E
Sbjct: 387 NFQNGFGEKAIALLCQMHSE 406
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 2/125 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D++S NS + + + + +F M S + TF VL C+
Sbjct: 470 FDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMV 529
Query: 93 ERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
E G+ LMI + P ++DM + G E++ ++ F+ D + W LL+
Sbjct: 530 EEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALRMINDMPFEPDALIWKTLLA 589
Query: 151 SFLRH 155
S H
Sbjct: 590 SCKLH 594
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF I D+ + ++ L Y ++ A +F + + +TF+ +L C+A
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +GKQ H IK DS V +AL+ MY+K G + + E FK KD+V+WN+++
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S + +HG A +A VF+ M + +V+
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKM 594
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFDE+ ++ + + + Y R+ LF M + ++TF LG +
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG QVH +++K G D V +L+++Y K G + ++ F + E K VVTWN+++
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S + +GL EA G+F +M
Sbjct: 268 SGYAANGLDLEALGMFYSM 286
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R H +FD+ D S S LF ++R LF +H + + F+ VL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ L G+Q+H IK G + V T+L+D Y K + + F E++ ++VVT
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
W L+S + R+ + E +F M E
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNE 188
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C ++ DAL ++F EI G++ S + + + ++ LF M +
Sbjct: 343 CTAMLDAL--------RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+T++ +L A + E VHA ++K + V TAL+D Y K G + E+ +
Sbjct: 395 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F I+ KD+V W+A+L+ + + G + A +F +T+
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+ + + NS + Y + +F M + L+ +F V+ C+ L
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
+Q+H ++K G + ++TALM YSK + +++ FKEI +VV+W A++S
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
FL++ +EA +F M R+ V
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGV 393
>gi|410109969|gb|AFV61064.1| pentatricopeptide repeat-containing protein 81, partial [Aloysia
macrostachya]
Length = 385
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 90/166 (54%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 202 ISNALISMYLKSNSRNVEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFKNIHL 261
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF +L +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 262 DHLVIDQYTFAAILRSCSDLATLQLGRQIHVLVVKSGFEGNEYVSSALIFMYSKCGIIED 321
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 322 AWESFESSHKETSVTWNSMIFAYAQHGQGKIALDLFYLMTERHIKL 367
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L + AYT + ++ AC GK +H
Sbjct: 129 DLVTWNSMLAAYLEHNLEQCGFDIFLEMVRQRLEMDAYTLSSIISACFEDSQQSLGKSLH 188
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G D + AL+ MY K + ++++ F+ I KD+V+WN +L+ ++GL
Sbjct: 189 GLVIKKGFDQVTQISNALISMYLKSNSRNVEDALKIFEHINIKDLVSWNTILTGLSQNGL 248
Query: 158 AKEAFGVFQ 166
++ A +F+
Sbjct: 249 SENALRLFK 257
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 1/133 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N LF M + + TF P+L + + +Q+H +
Sbjct: 30 SWNALIGGYAEMGNLERCIELFMCMEMEGVKIDDATFAPLLTLLYDAESYDLTRQLHGKI 89
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V A + Y++ G + ++ AF + + D+VTWN++L+++L H L +
Sbjct: 90 MKCGLEHENTVLNATITAYAECGCIEDAKRAFNSSDGYXDLVTWNSMLAAYLEHNLEQCG 149
Query: 162 FGVFQAMTRERVE 174
F +F M R+R+E
Sbjct: 150 FDIFLEMVRQRLE 162
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 33/61 (54%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+AL DMY+K + ++ FK ++ ++ V+WNAL+ + G + +F M E V+
Sbjct: 1 SALFDMYAKCRKVEDANYLFKYMQERNTVSWNALIGGYAEMGNLERCIELFMCMEMEGVK 60
Query: 175 F 175
Sbjct: 61 I 61
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y + FD ++H DL S + Y +++ + L + +++ A +L AC
Sbjct: 314 YGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACR 373
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + K++H I+GG S+PV++ ++D+Y + G++ +V F+ IE KDVV+W +
Sbjct: 374 GLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTS 432
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S ++ +GLA +A VF +M +E
Sbjct: 433 MISCYVHNGLANKALEVFSSMKETGLE 459
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 1/136 (0%)
Query: 31 QVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + D+ S NS + +Y+ + LF M + YTF L AC
Sbjct: 114 KLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDS 173
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G Q+HA ++K G + V AL+ MY ++G + E+ F +E KD+VTWN++L
Sbjct: 174 SFIKLGMQIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSML 233
Query: 150 SSFLRHGLAKEAFGVF 165
+ F+++GL EA F
Sbjct: 234 TGFIQNGLYSEALEFF 249
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 72/146 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F+ I D+ S S + Y + +F M T L T +L A
Sbjct: 414 YAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVC 473
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+L ++GK++H +I+ G E + L+DMY++ G + ++ + F + ++++ W A
Sbjct: 474 SLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTA 533
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++S++ HG + A +F M E++
Sbjct: 534 MISAYGMHGYGEAAVELFMRMKDEKI 559
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +FD++S + + N+ + Y + ++ M ++
Sbjct: 5 CGSVLDA--------EMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSF 56
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+YTF +L AC + G ++H L IK G DS V +L+ +Y+K + + + F
Sbjct: 57 DSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLF 116
Query: 135 KEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + DVV+WN+++S++ +G+ EA +F M + V
Sbjct: 117 DRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGV 156
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ +A+AL YV + +F + D+ + NS L + ++ + F + +
Sbjct: 195 VYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQN 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + ++ A L GK++HA IK G DS +V L+DMY+K +
Sbjct: 255 ADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSY 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AF + KD+++W + + ++ +A + + + E ++
Sbjct: 315 GGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMD 359
>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
Length = 770
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
Query: 51 YTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE 110
+ RSR F A +F + + + +TF+ +L CS++ A E+G+Q+HA IK G S+
Sbjct: 369 HARSRGFQA-LKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTGFLSD 427
Query: 111 PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
VV +AL++MY+K G + ++ +AF E+ + +VTW +++S + +HG +EA +F+ M
Sbjct: 428 VVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFEDM 485
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++ ++ + + + YT + +F M + YT +L ACSA
Sbjct: 135 LFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAMLNACSASNN 194
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G QVH IK S + +L MY+K G L ++ AF+ + K+V+TW ++S+
Sbjct: 195 ADLGSQVHGYTIKYRALSITSIGNSLCRMYAKSGSLESAMRAFRMVPDKNVITWTTMISA 254
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ P+L C + + +H M+K GT ++ V T+L++ Y + G ++ F ++
Sbjct: 81 YVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATSLVNAYMRCGASQDARSLFDQMP 140
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+VVTW AL++ + + EA VF M
Sbjct: 141 EKNVVTWTALITGYTVNSQLLEALEVFVEM 170
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T V+ C GKQV A K G + VK + M +Y + G E++ F+E
Sbjct: 282 FTLTSVMSLCGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEE 341
Query: 137 IEFKDVVTWNALLSSF 152
++ ++TWNA++S +
Sbjct: 342 MDDVSIITWNAMISGY 357
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ D S + + Y +S LF M L L +C+ + A
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+H ++K G + + AL+ MY K G + E+ + F++I KD+V+WN +++
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 152 FLRHGLAKEAFGVFQAM 168
+ RHG KEA +F++M
Sbjct: 481 YARHGFGKEALALFESM 497
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI +A VF++I+ D+ S N+ + Y R ALF M T +
Sbjct: 453 CGSIEEAF--------DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKP 503
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL ACS ++G + M + G + T ++D+ + G L E++
Sbjct: 504 DDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNL 563
Query: 134 FKEIEF-KDVVTWNALLSSFLRHG 156
K + F D TW ALL + HG
Sbjct: 564 MKSMPFYPDAATWGALLGASRIHG 587
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y++ GLL E+ F+E+ +DV W A++S F+++G+ EA +F+ M
Sbjct: 256 YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + + ++ Y K G L + F ++ KDVV+WNA+LS F ++G +EA +F
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178
Query: 168 M 168
M
Sbjct: 179 M 179
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 39/138 (28%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+++ DL S N L Y ++ N A ALF M
Sbjct: 111 RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM---------------------- 148
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
PE+ + V A++ +++ G + E+ + F ++ K+ ++WN LL
Sbjct: 149 --PEK---------------DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLL 191
Query: 150 SSFLRHGLAKEAFGVFQA 167
S+++++G ++A +F +
Sbjct: 192 SAYVQNGRIEDARRLFDS 209
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
TA++ + + G+L E+ F+E+ K+ V+WNA+++ +++ ++A +F M
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQM 334
>gi|255542944|ref|XP_002512535.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548496|gb|EEF49987.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 387
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 1/150 (0%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +Q F E++ DL + N+ + Y RS + A + +F M + TFT V
Sbjct: 212 RLPEANQYFHEMTRRDLITWNTIIAGYERSDSIEALF-IFSEMKLNGFDPDCNTFTSVTA 270
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ L G+QVH +I+ G D + ++ AL+DMY+K G++ +S + F E+ K++V+
Sbjct: 271 ACANLAVLSCGQQVHGGIIQKGLDKDLILANALIDMYAKCGIITDSRKIFSELSCKNLVS 330
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
W +++ + HG +E +F M ++
Sbjct: 331 WTSMMIGYGAHGFGREVVELFDEMVESGIK 360
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFDE+ D+ + + Y W++FC M ++ +N A+T + VL AC +
Sbjct: 15 NVFDEMLERDVVAWTVMIAGYASCNEHAYAWSMFCDMVASEMNPNAFTISSVLKACKGMK 74
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL-LGESVEAFKEIEFKDVVTWNALL 149
+ G VH IK G + V ALMD Y+ + + E+ F IE K+ V+W L+
Sbjct: 75 SLSCGTLVHGFAIKHGIEGSIFVDNALMDAYATCCVSMREACLVFCGIEVKNAVSWTTLI 134
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ + G +F+ M E E
Sbjct: 135 AGYTHKGDGHLGLQIFRQMLLEEEE 159
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y+F+ + AC+++ + GKQ+HA +IK G + V +++DMY + G L E+ + F E
Sbjct: 163 YSFSIAVRACASIGSHNFGKQIHAAVIKHGCEFSLPVMNSILDMYCRCGRLPEANQYFHE 222
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D++TWN +++ + R + EA +F M
Sbjct: 223 MTRRDLITWNTIIAGYERSD-SIEALFIFSEM 253
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++ F E++ DL + N+ + Y RS N + +F M S + +TFT ++ AC+ L
Sbjct: 266 NRYFYEMNQRDLITWNTLIAGYERS-NPTESLYVFSMMESEGFSPNCFTFTSIMAACATL 324
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+Q+H +I+ G D + AL+DMYSK G + +S + F + +D+V+W A++
Sbjct: 325 AFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMM 384
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ HG +EA +F M R +
Sbjct: 385 IGYGTHGYGEEAVELFDKMVRSGI 408
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ D+ + + YT N W +FC M + L+ A+T + VL AC +
Sbjct: 65 LFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKC 124
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL-LGESVEAFKEIEFKDVVTWNALLS 150
G+ VH L IK G D V ALMDMY+ + + ++ F+ I K+ V+W L++
Sbjct: 125 LSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIA 184
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ VF+ M E VE
Sbjct: 185 GYTHRDDGYGGLRVFRQMLLEEVEL 209
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 12 AKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
A C+S+ DA VF I + S + + YT + +F M
Sbjct: 155 ATCCVSMDDAC--------MVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEE 206
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ L ++F+ + AC+++ + G+Q+HA + K G +S V +++DMY + E+
Sbjct: 207 VELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEAN 266
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ +D++TWN L++ + R E+ VF M E
Sbjct: 267 RYFYEMNQRDLITWNTLIAGYERSN-PTESLYVFSMMESE 305
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V+ T L+ Y GL+GE+ F E+ +DVV W +++ + A+ VF M E
Sbjct: 44 VLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNE 103
Query: 172 RVE 174
++
Sbjct: 104 ELD 106
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ D S + + Y +S LF M L L +C+ + A
Sbjct: 361 LFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAA 420
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+H ++K G + + AL+ MY K G + E+ + F++I KD+V+WN +++
Sbjct: 421 LELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAG 480
Query: 152 FLRHGLAKEAFGVFQAM 168
+ RHG KEA +F++M
Sbjct: 481 YARHGFGKEALALFESM 497
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI +A VF++I+ D+ S N+ + Y R ALF M T +
Sbjct: 453 CGSIEEAF--------DVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKP 503
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL ACS ++G + M + G + T ++D+ + G L E++
Sbjct: 504 DDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNL 563
Query: 134 FKEIEF-KDVVTWNALLSSFLRHG 156
K + F D TW ALL + HG
Sbjct: 564 MKSMPFYPDAATWGALLGASRIHG 587
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y++ GLL E+ F+E+ +DV W A++S F+++G+ EA +F+ M
Sbjct: 256 YAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEM 303
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + + ++ Y K G L + F ++ KDVV+WNA+LS F ++G +EA +F
Sbjct: 119 DRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQ 178
Query: 168 M 168
M
Sbjct: 179 M 179
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 60/138 (43%), Gaps = 39/138 (28%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+++ DL S N L Y ++ N A ALF M
Sbjct: 111 RKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQM---------------------- 148
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
PE+ + V A++ +++ G + E+ + F ++ K+ ++WN LL
Sbjct: 149 --PEK---------------DVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLL 191
Query: 150 SSFLRHGLAKEAFGVFQA 167
S+++++G ++A +F +
Sbjct: 192 SAYVQNGRIEDARRLFDS 209
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
TA++ + + G+L E+ F+E+ K+ V+WNA+++ +++ ++A +F M
Sbjct: 281 TAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELFDQM 334
>gi|410109963|gb|AFV61061.1| pentatricopeptide repeat-containing protein 81, partial [Aloysia
citrodora]
Length = 391
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 198 ISNALISMYLRSNSRNVEDAFKIFEHITVKDLVSWNTILTGLSQNGLSEIALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q H L++K G + V +AL+ MYSK G++ +
Sbjct: 258 DHLVIDQYTFAAVLRSCSDLATLQLGRQTHVLVVKSGFEGNEYVSSALIFMYSKCGIIKD 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 ARESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERHIKL 363
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + + +F M L + AYT + ++ AC
Sbjct: 115 RVFDS-SDGFRDLVTWNSMLAAYLEYKLEECGFNIFLEMVRQRLEMDAYTLSSIISACFE 173
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMY--SKYGLLGESVEAFKEIEFKDVVTWN 146
GK +H L+IK G D + AL+ MY S + ++ + F+ I KD+V+WN
Sbjct: 174 DSQQSLGKSLHGLVIKKGLDQVTQISNALISMYLRSNSRNVEDAFKIFEHITVKDLVSWN 233
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 234 TILTGLSQNGLSEIALRLFQ 253
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 1/155 (0%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A +R + VF + + S N+ + Y N LF M + + TF
Sbjct: 4 AKCRRVEDANTVFMYMQERNTVSWNALIGGYAEMCNLQRCIELFMCMEMEGVKVDDATFA 63
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-F 139
P+L + + +Q+H +++ G + E V A + Y++ G + ++ F + F
Sbjct: 64 PLLTLLYDAESYDLTRQLHGKIMQRGLEHENTVLNATITAYAECGCIEDAKRVFDSSDGF 123
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+D+VTWN++L+++L + L + F +F M R+R+E
Sbjct: 124 RDLVTWNSMLAAYLEYKLEECGFNIFLEMVRQRLE 158
>gi|410110009|gb|AFV61084.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
diamantinensis]
Length = 372
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNSRNVEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLLTDQYTFAAVLRSCSDLXTLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 315 AWESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFHLMTERRIKL 360
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD SHG DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SHGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVKQRLEIDAYTLSSVISACXE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSLHGFVIKXGLDHVTQISNALVSMYLKSNSRNVEDALKIFEHINIKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 231 TILTGLSQNGLSENALRLFQNI 252
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y + LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMXERNAVSWNALIGGYAEMGDLERCVTLFVGMEMEGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H +++ G + E V A + Y++ G + ++ F ++D+
Sbjct: 64 PLLNDAKSYDLTRQLHGKIMRRGLEYENTVLNATITAYAECGCIEDAKRVFDSSHGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M ++R+E
Sbjct: 124 VTWNSMLAAYLEHNLEEYGFNIFLEMVKQRLEI 156
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++ F E++ DL + N+ + Y RS N + +F M S + +TFT ++ AC+ L
Sbjct: 250 NRYFYEMNQRDLITWNTLIAGYERS-NPTESLYVFSMMESEGFSPNCFTFTSIMAACATL 308
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+Q+H +I+ G D + AL+DMYSK G + +S + F + +D+V+W A++
Sbjct: 309 AFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMM 368
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ HG +EA +F M R +
Sbjct: 369 IGYGTHGYGEEAVELFDKMVRSGI 392
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
YT N W +FC M + L+ A+T + VL AC + G+ VH L IK G D
Sbjct: 67 GYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDG 126
Query: 110 EPVVKTALMDMYSKYGL-LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V ALMDMY+ + + ++ F+ I K+ V+W L++ + VF+ M
Sbjct: 127 FIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQM 186
Query: 169 TRERVEF 175
E VE
Sbjct: 187 LLEEVEL 193
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 12 AKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
A C+S+ DA VF I + S + + YT + +F M
Sbjct: 139 ATCCVSMDDAC--------MVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEE 190
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ L ++F+ + AC+++ + G+Q+HA + K G +S V +++DMY + E+
Sbjct: 191 VELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEAN 250
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ +D++TWN L++ + R E+ VF M E
Sbjct: 251 RYFYEMNQRDLITWNTLIAGYERSN-PTESLYVFSMMESE 289
>gi|410109993|gb|AFV61076.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
micrantha]
Length = 390
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 202 ISNALVSMYLKSNNRNMEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFQNIHL 261
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 262 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 321
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 322 ARESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 367
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 119 RVFDS-SDGYRDLVTWNSILAAYLEHNLEEYGFNIFLEMVKQRLEMDAYTLSSVISACFE 177
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESVEAFKEIEFKDVVTWN 146
GK +H L IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 178 DTQQSLGKSLHGLAIKKGLDQVTQISNALVSMYLKSNNRNMEDALKIFEHINIKDLVSWN 237
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 238 TILTGLSQNGLSENALRLFQ 257
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF+ + + S N+ + Y N LF M + + TF P+L
Sbjct: 11 RRVEDANKVFNYMRERNAVSWNALIGGYAEMANLERCVMLFVGMEMEGVRVDDATFAPLL 70
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 71 TLLYDAELYDLMRQLHGKIMKRGLEHENTVLNATITAYAECGCIEDAKRVFDSSDGYRDL 130
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M ++R+E
Sbjct: 131 VTWNSILAAYLEHNLEEYGFNIFLEMVKQRLEM 163
>gi|317106614|dbj|BAJ53121.1| JHL07K02.11 [Jatropha curcas]
Length = 514
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
Y +VF ++ D+ + NS + Y R+ F F M S+ + +TF V+ A
Sbjct: 95 YEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITA 154
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ L A + +H LM++ + ++ +AL+DMYSK G + + E F+ +E DV W
Sbjct: 155 CARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVW 214
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERV 173
N+L++ HGLA +A VF M E V
Sbjct: 215 NSLINGLAVHGLALDAMMVFSKMEAENV 242
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++D + + G + + F ++ +DVVTWN+++ ++R+G +EA FQAM VE
Sbjct: 85 VIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVE 142
>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 750
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD + D S + + Y ++ + + M +L TF L AC+ +
Sbjct: 333 NLFDMMPQRDSVSWAAIIAGYAQNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIA 392
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GKQVH +++ G + +V AL+ MY K G + E+ + F+ ++ KD+V+WN +L+
Sbjct: 393 ALELGKQVHGQVVRTGYEKGCLVGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLA 452
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ RHG ++A VF++M
Sbjct: 453 GYARHGFGRQALTVFESM 470
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A +R +FD + D+ S N+ L Y RS + +F M + ++
Sbjct: 106 ARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMPHK----NSISWN 161
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L A E ++ + + +D E + LM Y K +LG++ + F +I +
Sbjct: 162 GLLAAYVRSGRLEEARR----LFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIPVR 217
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQ 166
D+++WN ++S + + G +A +F+
Sbjct: 218 DLISWNTMISGYAQDGDLSQARRLFE 243
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 2/129 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ VF + H D+ S N+ L Y R +F M + + T VL ACS
Sbjct: 433 YDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMVGVLSACSHT 492
Query: 90 PAPERGKQ-VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+RG + H++ G ++D+ + G L E+ + + F+ D TW A
Sbjct: 493 GLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEAQNLIRNMPFEPDAATWGA 552
Query: 148 LLSSFLRHG 156
LL + HG
Sbjct: 553 LLGASRIHG 561
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 24/150 (16%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC------YMHSTCLNLTAYTFTPVLG 84
VFD + H + S N L +Y RS LF + CL + Y +LG
Sbjct: 147 DVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCL-MGGYVKRNMLG 205
Query: 85 ACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L P R MI G Y++ G L ++ F+E +DV
Sbjct: 206 DARQLFDQIPVRDLISWNTMISG---------------YAQDGDLSQARRLFEESPVRDV 250
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
TW A++ ++++ G+ EA VF M ++R
Sbjct: 251 FTWTAMVYAYVQDGMLDEARRVFDEMPQKR 280
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y++ L ++ F + KDVV+WNA+LS ++R G EA VF M
Sbjct: 105 YARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRM 152
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/154 (20%), Positives = 62/154 (40%), Gaps = 40/154 (25%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA--------------TWA--LFCYMHSTCLNL 74
Q+FD+I DL S N+ + Y + + TW ++ Y+ L+
Sbjct: 209 QLFDQIPVRDLISWNTMISGYAQDGDLSQARRLFEESPVRDVFTWTAMVYAYVQDGMLDE 268
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
F + P++ + + +MI G Y++Y + E F
Sbjct: 269 ARRVFDEM---------PQKREMSYNVMIAG---------------YAQYKRMDMGRELF 304
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+E+ F ++ +WN ++S + ++G +A +F M
Sbjct: 305 EEMPFPNIGSWNIMISGYCQNGDLAQARNLFDMM 338
>gi|410109981|gb|AFV61070.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
camara]
Length = 373
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNNRNVEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 315 ARESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 360
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 112 RVFDS-SDGYRDLVTWNSILAAYLEHNLEEYGFNIFLEMVKQRLEMDAYTLSSIISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESVEAFKEIEFKDVVTWN 146
GK +H L IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSLHGLAIKKGLDQVTQISNALVSMYLKSNNRNVEDALKIFEHINIKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 231 TILTGLSQNGLSENALRLFQ 250
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVMLFVGMEMEGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 64 TLLYDAELYDLMRQLHGKIMKRGLEHENTVLNASITAYAECGCIEDAKRVFDSSDGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M ++R+E
Sbjct: 124 VTWNSILAAYLEHNLEEYGFNIFLEMVKQRLEM 156
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VF + ++ S N + Y + ++ +F M + A TFT VL ACS L
Sbjct: 555 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 614
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E+GK++H +I+ + VV AL+DMY+K G + E++ F ++ +D V+W +++
Sbjct: 615 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 674
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+++ HG A EA +F+ M +
Sbjct: 675 AAYGSHGQAFEALKLFEKMQQ 695
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D++S N+ + Y + LF M + + T T V+ +C+ L
Sbjct: 354 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 413
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
ERGK++H +++ G + V +AL+DMY K G L + E F++I+ K+VV+WN++++
Sbjct: 414 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 473
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ G +K +F+ M E +
Sbjct: 474 GYSLKGDSKSCIELFRRMDEEGI 496
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF++I ++ S NS + Y+ + + LF M + T T + +L ACS
Sbjct: 455 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 514
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H +I+ +++ V ++L+D+Y K G +G + F+ + +VV+WN ++S
Sbjct: 515 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 574
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++ G EA +F M + V+
Sbjct: 575 GYVKVGSYLEALVIFTDMRKAGVK 598
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
+H L A+T+ VL ACS L GK VH +IK G + VV ++ + MY+K +
Sbjct: 289 LHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV 348
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++++ F E+ +DV +WN ++S + + G ++A +F+ M
Sbjct: 349 FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390
>gi|255585273|ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526827|gb|EEF29045.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 77/145 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FDE+SH D + N+ + Y S + + W L+ M S L AYTF +L +
Sbjct: 57 NLFDEMSHRDTVTWNTMISGYVNSGSLGSAWELYKSMKSFGLMPDAYTFGSILKGVACAC 116
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+QVH+L++K G + +AL+DMY+K + ++ FK I ++ V+WNAL++
Sbjct: 117 RLDVGQQVHSLIVKMGYEEHVYAGSALLDMYAKCERVRDAFMVFKCIPRRNSVSWNALIA 176
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
F+ G AF + + M E V
Sbjct: 177 GFVLEGDHDTAFWLLRCMEEEGVRL 201
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 81/144 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF + D S NS L ++++ + LF +M +++ Y F+ VL +CS L
Sbjct: 360 NVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHMRFAVVDIDHYAFSAVLRSCSDLA 419
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H L +K G +S V ++L+ MYSK G++ ++ ++F++ +TWN+++
Sbjct: 420 TLQLGQQIHVLTVKSGFESNDFVASSLIFMYSKCGMIEDARKSFEKTAKDSSITWNSIMF 479
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +HG A G+F M ++V+
Sbjct: 480 AYAQHGQGDVALGLFFQMRDKKVK 503
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 14/157 (8%)
Query: 15 CISIADALPKRYVYTHQVFD-EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S+ DA +VFD + DL + NS L ++ + LF M
Sbjct: 251 CGSLEDA--------ERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQFGFE 302
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY--SKYGLLGESV 131
YT+T ++ ACS + GK +H L+IK G + + A++ MY S + +++
Sbjct: 303 PDIYTYTTIISACS---HKDNGKSLHGLVIKRGLEQLVPICNAVIAMYLESSSNSMEDAL 359
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F +E KD V+WN++L+ F + G ++ A +F M
Sbjct: 360 NVFHSMESKDRVSWNSILTGFSQTGHSENALKLFVHM 396
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 59 ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
A W L C M + L TF+P+L + Q+H +IK G + V A +
Sbjct: 187 AFWLLRC-MEEEGVRLDDGTFSPLLTLLDEKKFYKLTMQLHCKIIKHGVQFDNTVCNATI 245
Query: 119 DMYSKYGLLGESVEAFK-EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
YS+ G L ++ F + +D+VTWN++L++FL H + AF +F M +
Sbjct: 246 TSYSQCGSLEDAERVFDGAVGSRDLVTWNSMLAAFLAHDRKETAFKLFLDMQQ 298
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+EI D+ + YT+ + L+ + + L +TF V+ A S + +
Sbjct: 501 VFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIAS 560
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q H +IK G D +P V L+DMY+K G + E+ +AF +KD WN+++++
Sbjct: 561 LRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIAT 620
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ +HG A++A VF+ M E
Sbjct: 621 YAQHGEAEKALQVFEDMIME 640
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 81/160 (50%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VF+ ++ DL S N+ + Y+R LF M + +
Sbjct: 391 CDSLTDA--------RKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSP 442
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T F +LG ++L E Q+H L+IK G + +AL+D+YSK +G++ F
Sbjct: 443 TLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVF 502
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+EI+ KD+V W A+ S + + +E+ +++ + R++
Sbjct: 503 EEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLK 542
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 59/106 (55%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M N A+ T VL +C +L A E+G+QVHA IK D++ VK L+DMY+
Sbjct: 330 LFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYA 389
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K L ++ + F + D+V++NA++ + R EA +F+ M
Sbjct: 390 KCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREM 435
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC-YMHSTCLNLTAYTFTPVLGAC 86
+ +++FD +SH +L + +S + YT + LF +M S Y V+ AC
Sbjct: 92 HANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRAC 151
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ Q+H L++KGG + V T+L+D Y+K+ + ++ F ++ K TW
Sbjct: 152 TQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWT 211
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ + + G ++ + +F M V
Sbjct: 212 TIIAGYSKQGRSQVSLKLFDQMKEGHV 238
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 54/120 (45%)
Query: 51 YTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE 110
Y++ + LF M + Y + VL AC L E GKQ+H +++ G +
Sbjct: 217 YSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMD 276
Query: 111 PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ +D Y K + + F + K+VV+W +++ +++ ++A +F M R
Sbjct: 277 VSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMAR 336
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 96 KQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
K++H+ ++ G + + L+ YSK L+ + + F + K++VTW++++S +
Sbjct: 58 KKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTH 117
Query: 155 HGLAKEAFGVFQAMTR 170
H EA +F R
Sbjct: 118 HSHCLEALMLFVQFMR 133
>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 647
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 76/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ H D+ S S + Y ++ LF M S +T + ++ C +
Sbjct: 130 RLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMA 189
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+HA K G S V ++L+DMY++ G LGE++ F ++ K+ V+WNAL++
Sbjct: 190 SYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNEVSWNALIA 249
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ R G +EA +F M RE
Sbjct: 250 GYARKGEGEEALALFVRMQRE 270
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + Y R ALF M T +T++ +L +CS++
Sbjct: 232 VFDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGC 291
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK +HA ++K V L+ MY+K G + ++ + F ++ DVV+ N++L
Sbjct: 292 LEQGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIG 351
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HGL KEA F M R +E
Sbjct: 352 YAQHGLGKEAAQQFDEMIRFGIE 374
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 51/96 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ L + GK VH ++ + V++ +L+ MY++ G L + F E+
Sbjct: 77 YNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYARCGSLEGARRLFDEMP 136
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+D+V+W ++++ + ++ A +A +F M + E
Sbjct: 137 HRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAE 172
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ S NS L Y + F M + TF VL ACS
Sbjct: 332 KVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHAR 391
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
+ GK LM K + + ++D+ + GLL ++ +E+ + V W ALL
Sbjct: 392 LLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALL 451
Query: 150 SSFLRH 155
+ H
Sbjct: 452 GASKMH 457
>gi|297838697|ref|XP_002887230.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
gi|297333071|gb|EFH63489.1| hypothetical protein ARALYDRAFT_476061 [Arabidopsis lyrata subsp.
lyrata]
Length = 1347
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD+I H + + NS L ++++ N LF YM+ +CL + TF V+ ACS++ +
Sbjct: 1019 VFDQIKHRSIVTWNSMLCGFSQNGNSLEAINLFDYMYHSCLEINKVTFLAVIQACSSIGS 1078
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G+ VH +I G + TAL+DMY+K G L + F+ + + +V+W++++++
Sbjct: 1079 LEKGRWVHHKLIVCGI-KDLFTDTALIDMYAKCGDLNTAETVFRAMSNRSIVSWSSMINA 1137
Query: 152 FLRHGLAKEAFGVFQAMT 169
+ HG A F M
Sbjct: 1138 YGMHGRIGSAISTFNQMV 1155
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 3/125 (2%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + Y LF M + + ++T ++ AC GKQ+H +I+
Sbjct: 932 NSHISLYAHRGMVIEALCLFRQMVTWRIKPDSFTLASIISACENTGLVRLGKQIHGHVIR 991
Query: 105 GGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
TD S+ V+ +++DMYSK G + + F +I+ + +VTWN++L F ++G + EA
Sbjct: 992 --TDVSDEFVQNSVIDMYSKSGFVNLACTVFDQIKHRSIVTWNSMLCGFSQNGNSLEAIN 1049
Query: 164 VFQAM 168
+F M
Sbjct: 1050 LFDYM 1054
Score = 62.0 bits (149), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 73 NLTAYTFTPVLGACS-ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
++ + F VL AC+ + G++VH +IK G D + V++T+L+ MY + G L ++
Sbjct: 655 QISKFVFPSVLRACAGSREHLSVGRKVHGRIIKSGVDDDAVIETSLLCMYGQTGNLSDAE 714
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F + +D+V W+ L+SS L + +A +F+ M + VE
Sbjct: 715 KVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVE 757
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 6 RMTNFPAKTCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
+M +F C S+ K + + ++F++I+ + S + + SY R
Sbjct: 789 KMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMISSYNRGEFSEKALRS 848
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE-PVVKTALMDMYS 122
F M + + T +L +C GK VH I+ D + AL+++Y+
Sbjct: 849 FSEMLKSGIEPNLVTLYSILSSCGLNGLIREGKSVHGFAIRRELDPNYESLSPALVELYA 908
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ G LG+ + +++V WN+ +S + G+ EA +F+ M R++
Sbjct: 909 ECGRLGDCETILHVVGDRNIVLWNSHISLYAHRGMVIEALCLFRQMVTWRIK 960
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + DL + ++ + S + +F M + A T V+ C+ L
Sbjct: 715 KVFDGMPVRDLVAWSTLVSSCLENCEVLKALRMFKCMVDDGVEPDAVTMISVVEGCAELG 774
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ VH + + D + + +L+ MYSK G L S + F++I K+ V+W A++S
Sbjct: 775 CLRIARSVHGQITRKMFDFDETLCNSLLTMYSKCGDLLSSEKIFEKIAKKNAVSWTAMIS 834
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
S+ R +++A F M + +E
Sbjct: 835 SYNRGEFSEKALRSFSEMLKSGIE 858
>gi|410110031|gb|AFV61095.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
pusilla]
Length = 372
Score = 86.3 bits (212), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ + DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNSRNXEDALKIFZHXNXKDLVSWNTILTGXSQNGLSENALRLFQXIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLXTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGXEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 315 AWESFESSLKETSVTWNSIIFAYAQHGQGKIAJDLFYLMTERRIKL 360
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 3/141 (2%)
Query: 31 QVFDE-ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDSSXGYRDLVTWNSMLAAYLEXNLEEYGFNIFLEMVKQRLEMDAYTLSSVISACFED 171
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG--ESVEAFKEIEFKDVVTWNA 147
GK +H +IK G D + AL+ MY K ++++ F+ KD+V+WN
Sbjct: 172 TQQSLGKSLHGFVIKKGLDHVTQISNALVSMYLKSNSRNXEDALKIFZHXNXKDLVSWNT 231
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 232 ILTGXSQNGLSENALRLFQXI 252
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 73/152 (48%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y + LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGDLEXCIXLFVGMEXEGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDV 142
+ + + +Q+H ++ G + E V A + Y++ G + ++ F ++D+
Sbjct: 64 TLLNDAESYDLTRQLHGKIMXRGLEYENTVLNATITAYAECGCIEDAKRVFDSSXGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L L + F +F M ++R+E
Sbjct: 124 VTWNSMLAAYLEXNLEEYGFNIFLEMVKQRLE 155
>gi|410110017|gb|AFV61088.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
hederifolia]
Length = 372
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNSRNVEDALKIFEHITVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 315 ARESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 360
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCITLFVGMEMEGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 64 TLLNDGESYNLTRQLHGKIMKRGLEHENTVLNATITAYAECGCIEDAKRVFDSSDGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M ++R+E
Sbjct: 124 VTWNSMLAAYLEHNLEEYGFNIFLEMVQQRLE 155
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ A
Sbjct: 112 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVQQRLEMDAYTLSSVISARFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSLHGFVIKKGLDQVTQISNALVSMYLKSNSRNVEDALKIFEHITVKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 231 TILTGLSQNGLSENALRLFQNI 252
>gi|410109989|gb|AFV61074.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
urticoides]
Length = 394
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 202 ISNALVSMYLKSNNRNVEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFQNIHL 261
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 262 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 321
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 322 ARESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 367
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 119 RVFDS-SDGYRDLVTWNSILAAYLEHNLEEYGFNIFLEMVKQRLEMDAYTLSSIISACFE 177
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESVEAFKEIEFKDVVTWN 146
GK +H L IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 178 DTQQSLGKSLHGLAIKKGLDQVTQISNALVSMYLKSNNRNVEDALKIFEHINIKDLVSWN 237
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 238 TILTGLSQNGLSENALRLFQ 257
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 11 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVMLFVGMEMEGVRVDDATFAPLL 70
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 71 TLLYDAELYDLMRQLHGKIMKRGLEHENTVLNASITAYAECGCIEDAKRVFDSSDGYRDL 130
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M ++R+E
Sbjct: 131 VTWNSILAAYLEHNLEEYGFNIFLEMVKQRLEM 163
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 80/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ ++ ++ S N+ + + R LF M T +T++ V AC++ +
Sbjct: 263 IFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGS 322
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA +IK G + L+DMY+K G + ++ + F+ + +D+V+WN+++S
Sbjct: 323 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 382
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HGL EA +F+ M + +V+
Sbjct: 383 YAQHGLGAEALQLFEQMLKAKVQ 405
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 1 MLSFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
+L+FI N AK C S+ +A +FD++ D+ S + Y++S
Sbjct: 142 LLNFI--LNMYAK-CGSLEEA--------QDLFDKMPTKDMVSWTVLISGYSQSGQASEA 190
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
ALF M +T + +L A P+ G+Q+HA +K G D V ++L+DM
Sbjct: 191 LALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDM 250
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y+++ + E+ F + K+VV+WNAL++ R G + +F M R+ E
Sbjct: 251 YARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFE 304
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 52/90 (57%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
++ +L C+ L ++G+ +HA + + + V+ +++MY+K G L E+ + F ++
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KD+V+W L+S + + G A EA +F M
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKM 197
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 84/145 (57%), Gaps = 3/145 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA--YTFTPVLGA 85
Y QVF++ D N+ + +Y+ S+ +++ M + C N+ YT+ V A
Sbjct: 56 YATQVFNQTQEPDGFIYNAMIRAYSSSQTPCVAISIYNKMRA-CQNILGDKYTYPFVFKA 114
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C++ A E+GK+VH ++++ G + + ++++L++ Y G +G + + F E + KDVV W
Sbjct: 115 CASQFAVEKGKEVHGVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFW 174
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
NAL++ + R G+ ++FGVF+ M
Sbjct: 175 NALITGYARQGMVLDSFGVFKEMVE 199
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEI + NS + Y + + L MH + L +T + VL AC+ +
Sbjct: 264 KLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPDRFTVSGVLSACAQMG 323
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G VH K G + + TAL+DMY+K G +G + + F ++ ++V TWNA+LS
Sbjct: 324 AFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFDQMNERNVATWNAILS 382
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG A+ A +F M
Sbjct: 383 GYASHGQAESAIELFSEM 400
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACS 87
QVFDE D+ N+ + Y R ++ +F M + T ++ AC
Sbjct: 159 AQQVFDEFDAKDVVFWNALITGYARQGMVLDSFGVFKEMVEVKEVRPNEGTMMGLIVACI 218
Query: 88 ALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G+ +H M+K E V ++ AL+++Y K G L + + F EI K+ V WN
Sbjct: 219 ESKNLKLGRAIHGYMMKDMVLREGVKLEAALINLYVKCGYLDGARKLFDEIPEKNTVVWN 278
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ + + G E + + M
Sbjct: 279 SLICGYCQIGSLNEVIELLREM 300
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 4/129 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+++ ++++ N+ L Y + LF M + + TF VL AC+
Sbjct: 364 KVFDQMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSG 423
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
E GKQ LM++ P V+ ++D+ + GLL E+ E K + + +VV W A
Sbjct: 424 LVENGKQYFDLMLQ-YYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGA 482
Query: 148 LLSSFLRHG 156
LLS+ HG
Sbjct: 483 LLSACSIHG 491
>gi|356565918|ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Glycine max]
Length = 703
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVFDE+ H D S N+ + ++ S + TW L M + + TF +L + +
Sbjct: 48 HQVFDEMPHRDTVSWNAIISAFASSGDLDTTWQLLGAMRRSTHAFDSRTFGSILKGVAYV 107
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+Q+H++M+K G +AL+DMY+K G + + F+ + ++ V+WN L+
Sbjct: 108 GKLKLGQQLHSVMLKVGLSENVFSGSALLDMYAKCGRVDDGYVVFQSMPERNYVSWNTLV 167
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
+S+ R G AF V M E VE
Sbjct: 168 ASYSRVGDCDMAFWVLSCMELEGVEI 193
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 11/157 (7%)
Query: 15 CISIADALPKRYVYTHQVFD-EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S+ DA +VFD + DL + NS L +Y + +F M +
Sbjct: 243 CCSLQDA--------ERVFDGAVLCRDLVTWNSMLGAYLMHEKEDLAFKVFLDMQNFGFE 294
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESV 131
AYT+T ++GACS GK +H L+IK G D+ V AL+ MY ++ + +++
Sbjct: 295 PDAYTYTGIVGACSVQEHKTCGKCLHGLVIKRGLDNSVPVSNALISMYIRFNDRCMEDAL 354
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F ++ KD TWN++L+ +++ GL+++A +F M
Sbjct: 355 RIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQM 391
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D + NS L Y + LF M + + YTF+ V+ +CS L
Sbjct: 355 RIFFSMDLKDCCTWNSILAGYVQVGLSEDALRLFLQMRCLVIEIDHYTFSAVIRSCSDLA 414
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q H L +K G D+ V ++L+ MYSK G++ ++ ++F+ + + WN+++
Sbjct: 415 TLQLGQQFHVLALKVGFDTNSYVGSSLIFMYSKCGIIEDARKSFEATSKDNAIVWNSIIF 474
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ +HG A +F M +V+
Sbjct: 475 GYAQHGQGNIALDLFYMMKERKVKL 499
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H IK G+ ++P L+ Y+K L + + F E+ +D V+WNA++S+F G
Sbjct: 16 HCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIISAFASSGDL 75
Query: 159 KEAFGVFQAMTR 170
+ + AM R
Sbjct: 76 DTTWQLLGAMRR 87
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VF + ++ S N + Y + ++ +F M + A TFT VL ACS L
Sbjct: 363 ENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQL 422
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E+GK++H +I+ + VV AL+DMY+K G + E++ F ++ +D V+W +++
Sbjct: 423 AVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMI 482
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+++ HG A EA +F+ M +
Sbjct: 483 AAYGSHGQAFEALKLFEKMQQ 503
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D++S N+ + Y + LF M + + T T V+ +C+ L
Sbjct: 162 KLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLL 221
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
ERGK++H +++ G + V +AL+DMY K G L + E F++I+ K+VV+WN++++
Sbjct: 222 DLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIA 281
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ G +K +F+ M E +
Sbjct: 282 GYSLKGDSKSCIELFRRMDEEGI 304
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF++I ++ S NS + Y+ + + LF M + T T + +L ACS
Sbjct: 263 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H +I+ +++ V ++L+D+Y K G +G + F+ + +VV+WN ++S
Sbjct: 323 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 382
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++ G EA +F M + V+
Sbjct: 383 GYVKVGSYLEALVIFTDMRKAGVK 406
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
+H L A+T+ VL ACS L GK VH +IK G + VV ++ + MY+K +
Sbjct: 97 LHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNV 156
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++++ F E+ +DV +WN ++S + + G ++A +F+ M
Sbjct: 157 FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 198
>gi|410110023|gb|AFV61091.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
lupulina]
Length = 375
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 194 ISNALVSMYLKSNSRNVEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFQNIHL 253
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 254 DHLLTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGYEGNEYVASALIFMYSKCGIIED 313
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 314 AWESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 359
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD SHG DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 111 RVFDS-SHGYRDLVTWNSMLAAYLEQNLEEYGFNIFLEMVKQRLEMDAYTLSSVISACFE 169
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 170 DTQQSLGKSLHGFVIKKGLGHVTQISNALVSMYLKSNSRNVEDALKIFEHINIKDLVSWN 229
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 230 TILTGLSQNGLSENALRLFQNI 251
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y + LF M + + TF P+L
Sbjct: 3 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGDLERCVTLFVGMEIEGVRVDDATFAPLL 62
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H +++ G + E V A + Y++ G + ++ F ++D+
Sbjct: 63 TLLNDAESYDLTRQLHGKIMRRGLEYENTVLNATITAYAECGCIEDAKRVFDSSHGYRDL 122
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L L + F +F M ++R+E
Sbjct: 123 VTWNSMLAAYLEQNLEEYGFNIFLEMVKQRLE 154
>gi|410110011|gb|AFV61085.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
duartei]
Length = 353
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F I+ DL S N+ L +++ LF +H L YTF VL +CS L
Sbjct: 211 KIFKHINVKDLVSWNTILTGLSQNGLSENALRLFQTIHLDHLVTDQYTFAAVLRSCSDLA 270
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H L++K G + V +AL+ MYSK G++ ++ E+F+ + VTWN+++
Sbjct: 271 TLQLGRQIHVLVVKSGFEGNEYVSSALIFMYSKCGIIEDAWESFESSHKETSVTWNSIIF 330
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ +HG K A +F MT R+
Sbjct: 331 AYAQHGQGKIALDLFYLMTERRI 353
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 32 VFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFD S G DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 108 VFDS-SDGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVRGRLEMDAYTLSSJISACFED 166
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNA 147
GK +H L+IK G D AL+ MY K + ++++ FK I KD+V+WN
Sbjct: 167 TQQSLGKSLHGLVIKKGLDEVTQXSNALISMYLKSNSRDVEDALKIFKHINVKDLVSWNT 226
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 227 ILTGLSQNGLSENALRLFQTI 247
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 1/146 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF + + S N+ + Y N LF M + + TF P+L +
Sbjct: 5 NKVFKYMRERNAVSWNALIGGYAEMGNLERCXTLFAGMEMEGVGVDDATFAPLLTLLNDA 64
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNAL 148
+ + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+VTWN++
Sbjct: 65 ESYDLARQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKXVFDSSDGYRDLVTWNSM 124
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
L+++L H L + F +F M R R+E
Sbjct: 125 LAAYLEHNLEEYGFNIFLEMVRGRLE 150
>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA R+V F+E+ N+ + Y ++ M + + +
Sbjct: 124 CGSIEDA---RFV-----FEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKM 175
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ ++ C+ L + E KQ HA +I+ G S+ V TAL+D YSK+G + ++ F
Sbjct: 176 DHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVF 235
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ K+V++WNAL+ + HG EA +F+ M +ER+
Sbjct: 236 DKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERM 274
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ +L S N+ + +F + LF M + ++TF ++ A + L
Sbjct: 31 RLFDEMPERNLVSWNTIISGLVDVGDFMEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLE 90
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+HA +K G + V AL+DMYSK G + ++ F+E+ K V WN +++
Sbjct: 91 LISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIA 150
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG ++EA ++ M
Sbjct: 151 GYALHGYSEEALDMYYEM 168
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD+++ ++ S N+ + Y LF M +N TF VL ACS
Sbjct: 233 HVFDKMASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSG 292
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFKDVVT-WNAL 148
ERG ++ M + + A M ++ + GLL E++ + FK W AL
Sbjct: 293 LSERGWEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAAL 352
Query: 149 LSS 151
L++
Sbjct: 353 LTA 355
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 39/70 (55%)
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
MI G + + ++ ++ M+ K G++ ++ F E+ +++V+WN ++S + G EA
Sbjct: 1 MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60
Query: 162 FGVFQAMTRE 171
F +F M E
Sbjct: 61 FRLFLNMWEE 70
>gi|410109971|gb|AFV61065.1| pentatricopeptide repeat-containing protein 81, partial [Aloysia
virgata]
Length = 391
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 198 ISNALISMYLKSNSRNVEDPLKIFEHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + + +A + MYSK G++ +
Sbjct: 258 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYISSAXIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 ARESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFHLMTERHIKL 363
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 2/129 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L + AYT + ++ AC GK +H
Sbjct: 125 DLVTWNSMLAAYLEHNLEECGFNIFLEMVRQRLEMDAYTLSSIISACFEGSQQSLGKSLH 184
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G D + AL+ MY K + + ++ F+ I KD+V+WN +L+ ++GL
Sbjct: 185 GLVIKKGLDQVTQISNALISMYLKSNSRNVEDPLKIFEHINVKDLVSWNTILTGLSQNGL 244
Query: 158 AKEAFGVFQ 166
++ A +FQ
Sbjct: 245 SENALRLFQ 253
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N LF M + + TF P+L + + +Q+H +
Sbjct: 26 SWNALIGGYAEMGNLERCIELFMCMEMEGVKIDDATFAPLLTLLYDAESYDLTRQLHGKI 85
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V A + Y++ G + ++ F + ++D+VTWN++L+++L H L +
Sbjct: 86 MKFGLEHENTVLNATITAYAECGCIEDAKRVFNSSDGYRDLVTWNSMLAAYLEHNLEECG 145
Query: 162 FGVFQAMTRERVEF 175
F +F M R+R+E
Sbjct: 146 FNIFLEMVRQRLEM 159
>gi|356532565|ref|XP_003534842.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g50990-like [Glycine max]
Length = 569
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 76/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++S D+ + NS + Y R+ F ++F M S + +TF V+ AC+ L
Sbjct: 155 KVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTACARLG 214
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A K VH LM++ + ++ AL+DMY+K G + S + F+E+ V WNA++S
Sbjct: 215 ALGNAKWVHGLMVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVARDHVSVWNAMIS 274
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
HGLA +A VF M E V
Sbjct: 275 GLAIHGLAMDATLVFSRMEMEHV 297
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + QVF+E++ +S N+ + +F M + + TF +L
Sbjct: 250 RIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIGILT 309
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-D 141
ACS E G++ +M + +P ++ ++D+ + GL+ E+ KE+ + D
Sbjct: 310 ACSHCGLVEEGRKYFGMM-QNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRMEPD 368
Query: 142 VVTWNALLSS 151
+V W ALLS+
Sbjct: 369 IVIWRALLSA 378
>gi|302816601|ref|XP_002989979.1| hypothetical protein SELMODRAFT_130617 [Selaginella moellendorffii]
gi|300142290|gb|EFJ08992.1| hypothetical protein SELMODRAFT_130617 [Selaginella moellendorffii]
Length = 395
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 81/161 (50%)
Query: 9 NFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
N A T + + A + +VFD + D S S + +Y S + LF M
Sbjct: 74 NLVAWTTMITSYARSEELDNARKVFDSMPEQDTVSWTSMIATYAESGHAEIALRLFKLMD 133
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
++T VL ACS+L AP GK +HA +++GG SE V TAL++MY K GLL
Sbjct: 134 LEGFRADKVSYTSVLQACSSLVAPREGKLIHASIVQGGVVSETSVGTALINMYGKCGLLM 193
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
E+ +++ D+ +W A + +F ++G A A +FQ +
Sbjct: 194 EARTMLEKMPRHDIGSWTATIVAFAQNGCAAGAIELFQNLN 234
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
TA++ +YS+ G L ++ F E+ K++V WNAL+++ G+ K+A VF+ M
Sbjct: 10 TAMIGIYSQDGFLVDARRVFDEMPEKNLVPWNALVTAHAAAGMLKDARRVFEGM 63
>gi|297743264|emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD I ++ N + Y + + A L+ M L +TF VL AC+AL A
Sbjct: 132 LFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA 191
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD---VVTWNAL 148
E G+++H +++ G + + V AL+DMY+K G +G + E F +I +D VV+WNA+
Sbjct: 192 IEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAM 251
Query: 149 LSSFLRHGLAKEAFGVFQAMTR 170
++ + HG A EA +F+ M R
Sbjct: 252 ITGYAMHGHATEALDLFEEMNR 273
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+ STCL T + +L +C A A + GKQ+HA + G + V+ T L+++Y
Sbjct: 65 HAESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCD 124
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L + F I ++ WN L+ + +G + A ++ M
Sbjct: 125 SLSSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQM 167
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+S ++ S N+ + Y +F +++T TF+ LGAC++L
Sbjct: 404 KLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G QVH L IK V +L+DMY+K G + + F E+E DV +WNAL+S
Sbjct: 464 SMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALIS 523
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HGL ++A +F M
Sbjct: 524 GYSTHGLGRQALRIFDIM 541
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 71/143 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + + + ++ +F M + +T + +L C+
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGK 362
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H L++K G D + V AL+D+Y+K + +V+ F E+ K+VV+WN ++
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIV 422
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ G +A +F+ R +V
Sbjct: 423 GYENLGEGGKALNMFREALRNQV 445
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 61/137 (44%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ I D+ + Y + F + L M YTF L A L A
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGA 262
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
K VH ++K + +P V L+ +Y++ G + ++ + F E+ DVV W+ +++
Sbjct: 263 FHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 152 FLRHGLAKEAFGVFQAM 168
F ++G +A +F M
Sbjct: 323 FCQNGFCNKAVDIFIRM 339
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L+ +H L + FT L +L E +H+ ++K G DS V AL++ Y
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICWWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S G + + F+ I KD+V W ++S ++ +G +++ + M
Sbjct: 192 SVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRM 238
>gi|410109985|gb|AFV61072.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
cujabensis]
Length = 357
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 88/164 (53%), Gaps = 8/164 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 194 ISNALVSMYLKSNNRNVEDALKIFEHINIKDLVSWNTILTGLSQNGLSENALRLFQNIHL 253
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 254 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 313
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ E+F+ + VTWN+++ ++ +HG K A +F MT R+
Sbjct: 314 ARESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRI 357
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 111 RVFDS-SDGYRDLVTWNSILAAYLEHNLEEYGFNIFLEMVKQRLEMDAYTLSSIISACFE 169
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESVEAFKEIEFKDVVTWN 146
GK +H L IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 170 DTQQSLGKSLHGLAIKKGLDQVTQISNALVSMYLKSNNRNVEDALKIFEHINIKDLVSWN 229
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 230 TILTGLSQNGLSENALRLFQNI 251
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 9 NKVFKYMRERNAVSWNALIGGYAEMGNLEXCVMLFVGMEMEGVRVDDATFAPLLTLLYDA 68
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNAL 148
+ +Q+H ++K G + E V A + Y++ G + ++ F + ++D+VTWN++
Sbjct: 69 ELYDLMRQLHGKIMKRGLEHENTVLNASITAYAECGCIEDAKRVFDSSDGYRDLVTWNSI 128
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
L+++L H L + F +F M ++R+E
Sbjct: 129 LAAYLEHNLEEYGFNIFLEMVKQRLEM 155
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 78/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D S + + Y ++ ++ +F M + TF+ L C+ +
Sbjct: 346 KLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIA 405
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GKQVH ++K G ++ V AL+ MY K G E+ + F+ IE KDVV+WN +++
Sbjct: 406 ALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIA 465
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ RHG ++A +F++M + V+
Sbjct: 466 GYARHGFGRQALVLFESMKKAGVK 489
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-----HSTCLNLTAYTFTPVLGA 85
+VF+ + S N+ + Y R+ F LF M S + LT Y LG
Sbjct: 67 RVFNSMPRRSSVSYNAMISGYLRNAKFSLARDLFDKMPERDLFSWNVMLTGYVRNRRLGE 126
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
L LM K + V A++ Y++ G + E+ E F ++ ++ ++W
Sbjct: 127 AHKL---------FDLMPK----KDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISW 173
Query: 146 NALLSSFLRHGLAKEAFGVFQAMT 169
N LL++++ +G KEA +F++ +
Sbjct: 174 NGLLAAYVHNGRLKEARRLFESQS 197
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPV 82
+R H++FD + D+ S N+ L Y ++ +F M H ++
Sbjct: 122 RRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHRNSISWN------- 174
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
G +A R K+ L + ++ E + LM Y K +LG++ + F + +DV
Sbjct: 175 -GLLAAYVHNGRLKEARRL-FESQSNWELISWNCLMGGYVKRNMLGDARQLFDRMPVRDV 232
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQ 166
++WN ++S + + G +A +F
Sbjct: 233 ISWNTMISGYAQVGDLSQAKRLFN 256
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP---------ATWALFCYMHSTCLNLTAYTFTP 81
+VF+++ H + S N L +Y + + W L + CL + Y
Sbjct: 160 EVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISW---NCL-MGGYVKRN 215
Query: 82 VLGACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
+LG L P R MI G Y++ G L ++ F E
Sbjct: 216 MLGDARQLFDRMPVRDVISWNTMISG---------------YAQVGDLSQAKRLFNESPI 260
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DV TW A++S ++++G+ EA F M
Sbjct: 261 RDVFTWTAMVSGYVQNGMVDEARKYFDEM 289
Score = 40.0 bits (92), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 4/130 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ VF+ I D+ S N+ + Y R LF M + T VL ACS
Sbjct: 446 NDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHS 505
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
+RG + M + + +P K T ++D+ + G L E+ + + F +W
Sbjct: 506 GLIDRGTEYFYSMDR-DYNVKPTSKHYTCMIDLLGRAGRLEEAENLMRNMPFDPGAASWG 564
Query: 147 ALLSSFLRHG 156
ALL + HG
Sbjct: 565 ALLGASRIHG 574
>gi|255579533|ref|XP_002530609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529857|gb|EEF31789.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +++AL Y ++Q+F ++S DL S NS + + + F +
Sbjct: 430 IQVSNALASAYSKHGNMEQSYQIFSDMSFRDLISWNSIISGFLLNGLPLLGLEKFSELQM 489
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YT +L C+++PA +GKQVH +++ G SE + L+ Y+K GL+
Sbjct: 490 SEFKSNEYTLNIILSICASIPALGQGKQVHGYIMRSGFSSEVSLGNGLITFYAKCGLIDW 549
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S F + KD V+WNAL+S++ +HG EA F+AM
Sbjct: 550 SSRVFTALAKKDTVSWNALISAYAQHGKGNEAIYQFEAM 588
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPVLGACSA 88
+VF+ + D S N+ + SYT+ NF A+ Y M T +TF +L +
Sbjct: 353 KVFERLERKDPVSWNTMISSYTQG-NF-GRLAILAYLEMRRTGTEPDEFTFGSLLASSEL 410
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L E +HAL+ + S V AL YSK+G + +S + F ++ F+D+++WN++
Sbjct: 411 LETVE---MIHALVFRNSLISNIQVSNALASAYSKHGNMEQSYQIFSDMSFRDLISWNSI 467
Query: 149 LS 150
+S
Sbjct: 468 IS 469
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 3/108 (2%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M +CL TF ++ +C E G Q HA IK G ++ + A + MYS
Sbjct: 291 MLGSCLRPNELTFVSLMSSC---LHAEIGYQFHAQAIKMGFEASTSLSNATITMYSSCKD 347
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L + + F+ +E KD V+WN ++SS+ + + A + M R E
Sbjct: 348 LHAARKVFERLERKDPVSWNTMISSYTQGNFGRLAILAYLEMRRTGTE 395
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 3/143 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ N+ + S N F M + + Y+ VL C
Sbjct: 150 YACVLFDVMPQRDVVVWNALITGCMESGNEEIGLNYFRDMCRSGVRHDNYSLASVLSGCK 209
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVTW 145
L G QVH+L+IK G+ EP V AL+ MY + + F+E E +D +T+
Sbjct: 210 -LVMVNFGMQVHSLVIKSGSLVEPSVINALITMYFNCENVLDGYLVFEEAEDSVRDQITY 268
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
N ++ + G +EA + + M
Sbjct: 269 NVMIDGLVSVGRIEEALIICRKM 291
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 2/136 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA--YTFTPVLGACSALPAPERGKQ 97
L LN QL T S + LF + S L YT + L AC+ L G +
Sbjct: 28 QLLKLNRQLAKLTHSTQYKDALHLFDKIRSLYYYLKPDHYTLSTTLTACANLCDTTFGNK 87
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+HA IK + V L+ +Y+K + F E E DV ++ L+S+ + G
Sbjct: 88 LHAYAIKSSLKTYTHVANTLLSLYAKAKEIDSVKWVFGETENPDVYSYATLVSACAKLGH 147
Query: 158 AKEAFGVFQAMTRERV 173
A +F M + V
Sbjct: 148 VDYACVLFDVMPQRDV 163
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VFD + D+ S N+ + +Y + +F M + +T VL AC++L
Sbjct: 228 EVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERPDGFTLVNVLSACASL 287
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +G+ VH + K G + E V TAL+DMYSK G + +++E F++ +DV TWN+++
Sbjct: 288 GSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVFRDTSKRDVSTWNSII 347
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+ HGL K+A +F M E
Sbjct: 348 TGLSVHGLGKDALEIFSEMVYE 369
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
PK Y H + + I + + NS + +Y S +F M + Y+FT V
Sbjct: 57 PKTVSYAHSILNRIESPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFV 116
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC+A E G+Q+H L +K ++ V+ L+++Y + G + + + +D
Sbjct: 117 LKACAAFCGFEEGRQIHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDA 176
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V+WN+LLS++L GL +EA +F M VE
Sbjct: 177 VSWNSLLSAYLDKGLVEEARALFDEMEERNVE 208
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ Y+ GL+ E+ E F + KDVV+WNA+++++ G E VF M + E
Sbjct: 213 MISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAE 270
>gi|302808794|ref|XP_002986091.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
gi|300146239|gb|EFJ12910.1| hypothetical protein SELMODRAFT_182148 [Selaginella moellendorffii]
Length = 604
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFDE++ D+ S ++ + +Y ++ + +F M + + TF V+ AC +
Sbjct: 190 QVFDELAIKDVVSWSNMIAAYAQTGHGTEALEMFHRMDAEGIQANVITFVTVVHACVLVA 249
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +H +I+ G +S V+ TAL++MY K G L E+ + F ++ +DVV W+A+L
Sbjct: 250 RITDARTIHCRIIEAGLESNTVLGTALLNMYGKCGGLAEAKKIFDKLAERDVVVWSAILE 309
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ RHG + A +F M +E V
Sbjct: 310 AYARHGHPRVALKLFTLMQQEGV 332
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F + ++ S N+ + +Y ++ +F M + + TFT VL A +
Sbjct: 89 RAFSGMKRRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPE 148
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K VH L ++ G S PVV TAL++MYSK G + + + F E+ KDVV+W+ +++
Sbjct: 149 LHRWAKLVHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIA 208
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ + G EA +F M E ++
Sbjct: 209 AYAQTGHGTEALEMFHRMDAEGIQ 232
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/90 (23%), Positives = 48/90 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L AC G+++HA ++ G + ++ MY K G + + AF ++
Sbjct: 36 YLDLLLACGRSKNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSGMK 95
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++V+WNA++S++ ++ + +A +F M
Sbjct: 96 RRNIVSWNAVISAYAQNDRSSDAIVIFLRM 125
>gi|242082860|ref|XP_002441855.1| hypothetical protein SORBIDRAFT_08g003540 [Sorghum bicolor]
gi|241942548|gb|EES15693.1| hypothetical protein SORBIDRAFT_08g003540 [Sorghum bicolor]
Length = 501
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD +S + S N+ + YT + LF MH ++ +T + L AC+A A
Sbjct: 113 VFDAMSFRSIVSWNTMIAGYTCHGDGLQALKLFSKMHQEGTRMSEFTLSSTLCACAAENA 172
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+Q+H + IK DS V TA +D+Y+K ++ ++ F++I K VTW+ L +
Sbjct: 173 TTECRQLHTIAIKLALDSNSFVGTAFLDVYAKCNMINDACLVFEKIPEKTAVTWSTLFAG 232
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+++GL K+A +FQ+ RE ++
Sbjct: 233 LVQNGLHKDALRLFQSSQREGIQL 256
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 66/102 (64%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ LT +T + +L C++L G+Q+HA++IK G + V ++L+D+Y++ G + E+
Sbjct: 254 IQLTEFTLSAILSTCASLALMIEGRQLHAVIIKYGFNGNLFVASSLVDVYARCGQIEEAY 313
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F +++ K+VV WNA+++SF RHG + EA +F+ M + +
Sbjct: 314 LVFADMKHKNVVLWNAMIASFTRHGKSWEAMILFEKMQQSGI 355
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ +L C+ + GK H L I G ++ + LM++Y+K G + + F
Sbjct: 57 FALHELLQQCAKRRSLLVGKGCHGLAIHLGLATDTITCNILMNLYTKCGRNDCARDVFDA 116
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F+ +V+WN +++ + HG +A +F M +E
Sbjct: 117 MSFRSIVSWNTMIAGYTCHGDGLQALKLFSKMHQE 151
>gi|224127716|ref|XP_002320145.1| predicted protein [Populus trichocarpa]
gi|222860918|gb|EEE98460.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 80/155 (51%), Gaps = 6/155 (3%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP---ATWALFCYMHSTCLN---LTAY 77
K + Y H++FDE+ ++ + N+ + R + + FCY L+ A
Sbjct: 37 KDFNYAHRLFDEMHVRNVVTWNTVICGLVDCRGSDYESSVYMGFCYFRKMLLDKVGFDAI 96
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T +L AC L E G+++H ++K G V +AL+D+Y K GL+ E+ AF E+
Sbjct: 97 TLNGLLRACLELNDVEIGRELHCFIVKLGFAVNSFVNSALVDLYGKCGLVKEARRAFDEV 156
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+D+V WN +LS + + LA+EA G F+ M E
Sbjct: 157 YCRDLVLWNVMLSCYAMNCLAEEASGFFKLMQEEN 191
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FDE+ DL N L Y + F M +TF+ +L +C L
Sbjct: 151 RAFDEVYCRDLVLWNVMLSCYAMNCLAEEASGFFKLMQEENFMTDGFTFSSMLNSCGTLG 210
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H L IK D + +V + L+DMY+K + ++ +AF + ++VV+WN ++
Sbjct: 211 SCNLGRQIHGLSIKLSFDLDVLVASGLVDMYAKSENIDDARKAFDGMAARNVVSWNTMVV 270
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ R G EA + M +E
Sbjct: 271 GYGRLGDGGEAMKLLIGMFQE 291
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD ++ ++ S N+ + Y R + L M L T ++ +CS+
Sbjct: 252 KAFDGMAARNVVSWNTMVVGYGRLGDGGEAMKLLIGMFQEDLRPDEITLASIIRSCSSAL 311
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
QV+A ++K G + + AL++ YSK G + +++ F + D+VTW +L+
Sbjct: 312 TSCEIMQVNAYVLKNGFHAFLSIANALINAYSKGGSIAMALQCFNTVLEPDLVTWTSLIG 371
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ H L K + F+ M + V
Sbjct: 372 AYAFHSLPKNSIDTFEEMLADGV 394
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 6 RMTNFPAK------TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA 59
R+T+F AK C I DA +FD+I + + +Y+R +P
Sbjct: 61 RLTHFAAKFIAFYAACGKIKDA--------RILFDKIPRTNPRRWIVLIGAYSRCGYYPE 112
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
++FC + L + Y VL AC L G+++H L++K +S+ V +AL+D
Sbjct: 113 ALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHTLILKNSLESDAYVCSALID 172
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
MY+K G + ++ F+ + KD+V NA++S + HGLA+EA + + M
Sbjct: 173 MYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGLAEEALNLVEEM 221
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 66/132 (50%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S S + + ++ + F M + + T+ T + +L AC+++ GK++H
Sbjct: 264 DVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSATISSLLPACASVGNGRCGKEIH 323
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ G + + V+TAL+DMY+K G E+ F + ++ TWN+++ + HG
Sbjct: 324 GHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMSERNSATWNSMIFGYANHGYCN 383
Query: 160 EAFGVFQAMTRE 171
EA +F M +
Sbjct: 384 EAIELFHQMKDD 395
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 7/143 (4%)
Query: 26 YVYTHQV-FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVL 83
Y Y ++ F +S + ++ NS +F Y LF M L TFT +L
Sbjct: 350 YFYEAKILFWRMSERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKLDHLTFTAIL 409
Query: 84 GACSALPAPERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-D 141
AC+ + G+ + LM K G ++D++ + G L E+ + K + K D
Sbjct: 410 TACAHAGLVDLGRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPD 469
Query: 142 VVTWNALLSSFLRHG---LAKEA 161
+ W ALL + +HG LA+EA
Sbjct: 470 LYVWGALLGACRKHGEIELAEEA 492
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ D I + S N+ + +T ++ + F M + +T+ VL AC+ L
Sbjct: 535 KIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLA 594
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQ+H +IK S+ + + L+DMYSK G + +S F++ KD VTWNA++
Sbjct: 595 SVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMIC 654
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HGL +EA G F+ M E V
Sbjct: 655 GYAQHGLGEEALGYFERMQLENV 677
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ D S N+ + ++ ++ N T LF M + +T+ VL ACS+ A
Sbjct: 435 MFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQA 494
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G ++H +IK G + V AL+DMY K G++ E+ + IE + +V+WNA+++
Sbjct: 495 LNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAG 554
Query: 152 F--LRHGLAKEAFGVFQAMTRERVE 174
F L+H +++A F M + V+
Sbjct: 555 FTLLKH--SEDAHSFFYEMLKMSVK 577
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ADA ++F+ + L N+ + R+ F + + L
Sbjct: 325 CGSLADA--------QRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF 376
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + AC+++ G+Q+H+L +K S V +++DMY K L E+ F
Sbjct: 377 NEISLSGAFSACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMF 436
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
E+E +D V+WNA++++ ++G +E +F +M R R+E
Sbjct: 437 DEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRME 476
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSALPAPERGKQV 98
D+ S NS L + ++ + +F M S + TF VL ACS L G QV
Sbjct: 139 DVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQV 198
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR---H 155
H L+++ G + V +AL+DMY+K L +S++ F EI K+ V W+A+++ ++ H
Sbjct: 199 HGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEH 258
Query: 156 GLAKEAFGVFQ 166
L E F Q
Sbjct: 259 ILGLELFKEMQ 269
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + ++ + V +C+ L A + G Q+HA +K S+ V TA +DMY+
Sbjct: 264 LFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYA 323
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K G L ++ F + + +NA++ +R+ EA FQ + + + F
Sbjct: 324 KCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGF 376
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 57/130 (43%), Gaps = 32/130 (24%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY---------------- 121
TF+ ++ CS + + GKQ HA MI G + + LM MY
Sbjct: 45 TFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKM 104
Query: 122 ------------SKYGLLGE---SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
S Y GE + E F + +DVV+WN++LS FL++G +++ VF
Sbjct: 105 SQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFL 164
Query: 167 AMTR-ERVEF 175
M R E V F
Sbjct: 165 DMGRSEEVGF 174
>gi|255556578|ref|XP_002519323.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541638|gb|EEF43187.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 396
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 77/141 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF + + +S N+ + +Y + F ++ALF M + + L + +L AC+ L
Sbjct: 231 RVFQSMPERNSASWNAMIAAYVQGNRFHESFALFDRMRAEGVVLDKFVAATMLSACTGLG 290
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GK +H + K G + + + TA++DMY K G L +++E FK + K + +WN ++
Sbjct: 291 ALEQGKWIHGYIEKKGIEKDSKLATAIIDMYCKCGSLEKALEVFKGLPHKGISSWNCMIG 350
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
HG + A +F+ M +E
Sbjct: 351 GLAMHGKGEAAIELFKEMEKE 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++FD I + D N+ + +Y + + + L+ +M + +TF V+ AC
Sbjct: 96 YAIKLFDSIPNPDAFFYNTIIKAYLQHLSPTNSILLYSHMLQHSVFPNDFTFPSVIRACC 155
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GKQ+HA ++K G + + L+ MY+++ E+ + ++ ++W
Sbjct: 156 IHDDIQLGKQIHAHVLKLGFGAHVISLNNLIHMYARFQAFEEARCVLYSMPEQNFISWTT 215
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L+S + + GL EAF VFQ+M
Sbjct: 216 LISGYSQWGLVDEAFRVFQSM 236
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F++ GD + N+ + + +S N +F M+ ++ +TF + A S
Sbjct: 609 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 668
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
++GKQVHA++ K G DSE V AL+ MY+K G + ++ + F E+ K+ V+WNA+++++
Sbjct: 669 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 728
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+HG EA F M V
Sbjct: 729 SKHGFGSEALDSFDQMIHSNV 749
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S + + YT+ F M + T + AC+ L A + G+Q+H
Sbjct: 515 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 574
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A G S+ + AL+ +YS+ G + ES AF++ E D + WNAL+S F + G +
Sbjct: 575 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 634
Query: 160 EAFGVFQAMTRERVE 174
EA VF M RE ++
Sbjct: 635 EALRVFVRMNREGID 649
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D SS + + +++ LFC M+ + T Y F+ VL AC +
Sbjct: 203 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 262
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G+Q+H L++K G S+ V AL+ +Y G L + F + +D VT+N L++
Sbjct: 263 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 322
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ G ++A +F+ M + +E
Sbjct: 323 GLSQCGYGEKAMELFKRMHLDGLE 346
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +F +S D + N+ + ++ LF MH L + T ++ AC
Sbjct: 300 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 359
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
SA RG+Q+HA K G S ++ AL+++Y+K + +++ F E E ++VV WN
Sbjct: 360 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 419
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
+L ++ + +F +F+ M E +
Sbjct: 420 VMLVAYGLLDDLRNSFRIFRQMQIEEI 446
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +Y + ++ +F M + YT+ +L C L E G+Q+H+ +IK
Sbjct: 419 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 478
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
V + L+DMY+K G L + + KDVV+W +++ + ++ +A
Sbjct: 479 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 538
Query: 165 FQAM 168
F+ M
Sbjct: 539 FRQM 542
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGAC-SA 88
+VFDE+ + + N ++ SRN + LF M S + TF+ VL AC
Sbjct: 101 KVFDEMPERTIFTWN-KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A + +Q+HA ++ G VV L+D+YS+ G + + F + KD +W A+
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 219
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S ++ EA +F M
Sbjct: 220 ISGLSKNECEAEAIRLFCDM 239
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G+++H+ ++K G DS + L D Y G L + + F E+ + + TWN ++
Sbjct: 62 DEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 121
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
L E FG+F M E V
Sbjct: 122 ASRNLIGEVFGLFVRMVSENV 142
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI+DA + F E+S + S N+ + +Y++ F M + +
Sbjct: 700 CGSISDA--------EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 751
Query: 75 TAYTFTPVLGACSALPAPERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL ACS + ++G ++ + G +P ++DM ++ GLL + E
Sbjct: 752 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 811
Query: 134 FKEIEFK-DVVTWNALLSSFLRH 155
+E+ K D + W LLS+ + H
Sbjct: 812 IQEMPIKPDALVWRTLLSACVVH 834
>gi|255539733|ref|XP_002510931.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550046|gb|EEF51533.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 461
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 30 HQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
HQ+FDE+S+ D S+ NS + Y+ + AL+ M + +TF VL AC
Sbjct: 148 HQMFDEMSNRDESAFAWNSLIAGYSELGLYEDAIALYFQMDEEYVEPDEFTFPRVLKACG 207
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G+ VH +I+ G ++ AL+DMY+K G + ++ F+++ KD V+WN+
Sbjct: 208 GLGLIQVGEAVHRDLIRLGFANDRFASNALVDMYAKCGDIVKARSIFEKMASKDSVSWNS 267
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+L+ ++RHGL EAF + M ++ +E
Sbjct: 268 MLTGYVRHGLIIEAFHTGRRMLQDGLEL 295
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +F++++ D S NS L Y R + M L L + + +L
Sbjct: 248 VKARSIFEKMASKDSVSWNSMLTGYVRHGLIIEAFHTGRRMLQDGLELDSVAISSLLANV 307
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+ + G Q+H +++ G + + +L+ MYS G L ++ F ++ +DVV+WN
Sbjct: 308 SSF---KLGVQIHGWILRRGMQWDLSIANSLIVMYSSNGKLVQTRWLFDNMQERDVVSWN 364
Query: 147 ALLSS 151
+++S+
Sbjct: 365 SIISA 369
>gi|255565583|ref|XP_002523781.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536869|gb|EEF38507.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 661
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 7/166 (4%)
Query: 17 SIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
S+ AL YV +VF+ I D+ + ++ + Y ++ + + M
Sbjct: 433 SVGTALLDAYVKLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKK 492
Query: 71 CLNLTAYTFTPVLGACSA-LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YTF+ V+ AC+A A E+GKQ HA IK + V +AL+ MY+K G +
Sbjct: 493 GVEPNEYTFSSVINACTAPTAAVEQGKQFHAWSIKSRFNDALCVSSALVTMYAKRGEIES 552
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E F+ +D+V+WN+++S + +HG A++A VF+ M + +E
Sbjct: 553 ANEVFRRQGVRDLVSWNSMVSGYAQHGHARKALEVFKEMQDQNLEL 598
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 68/139 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFD D+ N LF Y+R+ + LF +H + L T + VL AC+ L
Sbjct: 50 QNVFDRSPKQDVVQCNHLLFDYSRNNSHHEVVNLFVAIHRSDLLTDGSTLSCVLKACACL 109
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G QVH +K G + V T+L+DMY K + E F E+E ++VV+W +LL
Sbjct: 110 SCKKFGIQVHDYCVKSGFLEDISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLL 169
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ +GL EA F M
Sbjct: 170 VGYAHNGLNMEALECFFEM 188
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 80/143 (55%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D S NS + Y + + +F ++ + LT + F+ V+ +C+ +
Sbjct: 255 VFDNMVTRDAISWNSMVAGYVANGLYLEAIEMFYHLRLAGVKLTNFIFSSVIKSCANIKE 314
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLS 150
+Q+H ++KGG + + ++TALM Y+K + ++ + F + ++VV+W A++S
Sbjct: 315 LGFARQLHGQVLKGGFEYDHNIRTALMVAYNKGREIDDAFKIFSMMYGIRNVVSWTAIIS 374
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
L++GLA++A +F M+RE V
Sbjct: 375 GHLQNGLAEQAVNLFCEMSREGV 397
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--M 67
IS+ +L Y+ + +VFDE+ ++ S S L Y + N AL C+ M
Sbjct: 131 ISVGTSLVDMYMKSEYVEEGKRVFDEMEERNVVSWTSLLVGY--AHNGLNMEALECFFEM 188
Query: 68 HSTCLNLTAYTFTPVLGACSALPA-PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
+ + +TF VLGA + A ++G Q+H ++IK G ++ V +L++MYSK G+
Sbjct: 189 QAGAIKPNPFTFATVLGALADSKAIADKGVQIHTMVIKNGFEATIFVCNSLINMYSKSGM 248
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ + F + +D ++WN++++ ++ +GL EA +F
Sbjct: 249 VKNAKAVFDNMVTRDAISWNSMVAGYVANGLYLEAIEMF 287
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LFC M + YTF+ +L A + E VHA +IK + P V TAL+D Y
Sbjct: 388 LFCEMSREGVRPNDYTFSTILAAQPVVSPFE----VHAQVIKSDYEKSPSVGTALLDAYV 443
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G L E+ + F+ I+ KD+V W+A+++ + + G + A + M ++ VE
Sbjct: 444 KLGNLNEASKVFERIDDKDIVAWSAMVAGYAQTGDTEGAVKILIQMAKKGVE 495
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + + +S + Y +S+N+ L+ L +T + V+ ACS L
Sbjct: 220 QVFESMQDKSSVTWSSMVAGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 279
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQ+HA++ K G S V ++ +DMY+K G L ES F E++ K++ WN ++S
Sbjct: 280 ALIEGKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIIS 339
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F +H KE +F+ M ++
Sbjct: 340 GFAKHARPKEVMILFEKMQQD 360
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + L S N+ + YTR+R +F M + + +T + VL AC A
Sbjct: 119 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANC 178
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K++H L +K D V TAL+D+Y+K G++ ++V+ F+ ++ K VTW+++++
Sbjct: 179 DALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVA 238
Query: 151 SFLRHGLAKEAFGVF---QAMTRERVEF 175
+++ +EA ++ Q M+ E+ +F
Sbjct: 239 GYVQSKNYEEALLLYRRAQRMSLEQNQF 266
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 46/102 (45%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ A F +L C+ A K H ++ + + L++ YSK G + + +
Sbjct: 61 VQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
F + + +V+WN ++ + R+ + EA +F M E +F
Sbjct: 121 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKF 162
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ ++ N+ + + + LF M ++ TF+ +L C
Sbjct: 322 IFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 381
Query: 92 PERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT-WNALL 149
E G++ LM G V + ++D+ + GLL E+ E K I F+ + W +LL
Sbjct: 382 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLL 441
Query: 150 SS 151
+S
Sbjct: 442 AS 443
>gi|296088921|emb|CBI38481.3| unnamed protein product [Vitis vinifera]
Length = 665
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+H +FD++S L S N+ + Y + L+ M + L YTF V AC+
Sbjct: 145 SHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQSGLTPDQYTFASVFRACAT 204
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L E+GKQ H +MIK VV +ALMDMY K L + F + ++V+TW AL
Sbjct: 205 LATLEKGKQAHCVMIKSQIKENVVVNSALMDMYFKCSSLYDGHRVFNKSLNRNVITWTAL 264
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
+S + +HG E F M E
Sbjct: 265 ISGYGQHGRVAEVLVFFSKMKTE 287
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 3/109 (2%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L C T L + T+ +L C + G+++HA MI G + +KT L+ ++
Sbjct: 80 GLLC---RTGLQVEPATYALLLQECIFKKEFKTGRRIHAQMIVVGYYPDEYLKTKLLILH 136
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+K G L S F ++ K +++WNA+++ +++ GL +E ++ M +
Sbjct: 137 AKTGDLDTSHILFDDLSKKSLISWNAMIAGYVQKGLEEEGLNLYDEMRQ 185
>gi|410110035|gb|AFV61097.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
rotundifolia]
Length = 362
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 10/167 (5%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ +F+ I+ DL S N+ L +++ LF +H
Sbjct: 194 ISNALVSMYLKSNSRNVEDALNIFEHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 253
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + + +AL+ MYSK G++ +
Sbjct: 254 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFECNEYIASALIFMYSKCGIIED 313
Query: 130 SVEAFKEIEFKDV-VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F E+ K+ VTWN+++ ++ +HG K A +F MT R++
Sbjct: 314 ARESF-ELSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 359
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L + AYT + V+ AC GK +H
Sbjct: 121 DLVTWNSMLAAYLEHNXEEYGFNIFLEMVKQRLEMDAYTLSSVISACFEDTQQSLGKSLH 180
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+IK G D + AL+ MY K + +++ F+ I KD+V+WN +L+ ++GL
Sbjct: 181 CFVIKKGLDQVTQISNALVSMYLKSNSRNVEDALNIFEHINVKDLVSWNTILTGLSQNGL 240
Query: 158 AKEAFGVFQAM 168
++ A +FQ +
Sbjct: 241 SENALRLFQNI 251
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 75/152 (49%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y + LF M + + TF P+L
Sbjct: 3 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGDLERCVTLFVGMEIEGVRVDDATFAPLL 62
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 63 TLLNDAESYDLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKRMFDSSQGYRDL 122
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H + F +F M ++R+E
Sbjct: 123 VTWNSMLAAYLEHNXEEYGFNIFLEMVKQRLE 154
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + D S + + Y +S ++ +F + +L TF L C+ +
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GKQ+H +K G + V AL+ MY K G + E+ + F+ IE KDVV+WN +L+
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ RHG ++A VF++M
Sbjct: 469 GYARHGFGRQALTVFESM 486
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-----HSTCLNLTAYTFTPVLGA 85
VF+ + S N+ + Y R+ F LF M S + LT Y LG
Sbjct: 70 HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGD 129
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
+++ LM + + V +L+ Y++ G + E+ E F + K+ ++W
Sbjct: 130 A---------RRLFDLM----PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISW 176
Query: 146 NALLSSFLRHGLAKEAFGVFQA 167
N LL++++ +G +EA +F++
Sbjct: 177 NGLLAAYVHNGRIEEACLLFES 198
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ Y + LG++ F + KDVV+WN+LLS + ++G EA VF M
Sbjct: 115 NVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
>gi|255540253|ref|XP_002511191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550306|gb|EEF51793.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 538
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 84/160 (52%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA H VFDE+ ++ + N+ + Y + M ++ + +
Sbjct: 319 CGSIEDA--------HCVFDEMPERNIVAWNTIIAGYALHGYSEEALDMVYEMRNSGVRM 370
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ V+ C+ L + KQ HA +++ G S+ V +AL+D YSK+G + + F
Sbjct: 371 DHFTFSIVVRICARLASLNYAKQAHASLLRHGFGSDIVANSALVDFYSKWGRVETARHVF 430
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ K+V++WNAL++ + HG +A +F+ M +ER+
Sbjct: 431 DQMPCKNVISWNALIAGYGNHGKGDDAIELFEQMLQERIR 470
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
++ + FDE+ +L S N+ + ++ + LF M + + TF ++ A
Sbjct: 222 IHARKWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLFLIMWEEFSDAGSRTFATMIQAS 281
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L G+Q+H+ +K + V AL+DMY K G + ++ F E+ +++V WN
Sbjct: 282 AGLGWISIGRQLHSCALKMEVGDDIFVSCALIDMYGKCGSIEDAHCVFDEMPERNIVAWN 341
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + HG ++EA + M V
Sbjct: 342 TIIAGYALHGYSEEALDMVYEMRNSGVR 369
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 52/100 (52%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
++ + T+ ++ AC L + K+V M+ G + + + ++ + K G++ +
Sbjct: 166 FDVGSSTYDALVSACIGLRSIPGVKRVLNYMLSNGFEPDQYMANRVLLVQVKCGMMIHAR 225
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F E+ +++V+WN ++S + G KEAF +F M E
Sbjct: 226 KWFDEMPERNLVSWNTIISGLVDMGDYKEAFRLFLIMWEE 265
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + D S + + Y +S ++ +F + +L TF L C+ +
Sbjct: 349 KFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIA 408
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GKQ+H +K G + V AL+ MY K G + E+ + F+ IE KDVV+WN +L+
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ RHG ++A VF++M
Sbjct: 469 GYARHGFGRQALTVFESM 486
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-----HSTCLNLTAYTFTPVLGA 85
VF+ + S N+ + Y R+ F LF M S + LT Y LG
Sbjct: 70 HVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGD 129
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
+++ LM + + V +L+ Y++ G + E+ E F + K+ ++W
Sbjct: 130 A---------RRLFDLM----PEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISW 176
Query: 146 NALLSSFLRHGLAKEAFGVFQA 167
N LL++++ +G +EA +F++
Sbjct: 177 NGLLAAYVHNGRIEEACLLFES 198
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ Y + LG++ F + KDVV+WN+LLS + ++G EA VF M
Sbjct: 115 NVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
Length = 1058
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Query: 40 DLSSLNSQLFSYTRSRNF-PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV 98
D S NS + Y + N A ++ +HS + + TF+ +L AC+++ A ERG ++
Sbjct: 649 DAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQI-MDCCTFSIILNACASVAALERGMEL 707
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
HA I+ +S+ VV++AL+DMYSK G + + + F + ++ +WN+++S + RHGL
Sbjct: 708 HAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLG 767
Query: 159 KEAFGVFQAMTRER 172
++A +F+ M R R
Sbjct: 768 RKAIEIFEEMLRSR 781
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 2/134 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRN-FPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ ++ D S N+ + S+ +F M L TF +L A S L
Sbjct: 537 KVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPL 596
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNAL 148
E GKQVHA ++K G + VV AL+ Y+K G +G F + + +D ++WN++
Sbjct: 597 SVLELGKQVHAAVMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSM 656
Query: 149 LSSFLRHGLAKEAF 162
+S ++ +G +EA
Sbjct: 657 ISGYIYNGNLQEAM 670
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 89 LPAPERG------KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
LP RG + +H +IK G + + + L++ Y+K L + + F E+ ++
Sbjct: 68 LPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNA 127
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V+W L+S ++ HG+A+EAF VF+AM RE
Sbjct: 128 VSWTCLVSGYVLHGIAEEAFRVFRAMLRE 156
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D S N+ + + ++ N + M +C++ + + L +C+ L
Sbjct: 436 KIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLK 495
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+QVH +K G D + V L+ MY + G + + + F + D V+WN ++
Sbjct: 496 LLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMM 554
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS----TCLNLTAYTFTPV 82
+ +VFD DL + N+ + Y + + +T+ LF M L T +TF +
Sbjct: 221 ILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEHTFGSL 280
Query: 83 LGACSALPAPERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+ A S QV ++K G S+ V +AL+ ++++GL E+ + F ++ K+
Sbjct: 281 ITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAFARHGLTDEAKDIFLSLKQKN 340
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VT N L+ +R ++EA +F TR V+
Sbjct: 341 AVTLNGLIVGLVRQDFSEEAVKIFVG-TRNTVD 372
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 67/157 (42%), Gaps = 15/157 (9%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYT----RSRNFPATWALFCYMHSTCLNLTAYTFT 80
R QVFDE+ + S + Y F A+ + + C T++TF
Sbjct: 111 RLAAASQVFDEMPERNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGC-RPTSFTFG 169
Query: 81 PVLGACSALPAPER---GKQVHALMIKGGTDSEPVVKTALMDMYSKYG----LLGESVEA 133
+L AC P+R QVH L+ K S V AL+ MY +L + V
Sbjct: 170 TLLRACQD-GGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCTVGPPILAQRV-- 226
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F +D++TWNAL+S + + G F +F+ M R
Sbjct: 227 FDGTPIRDLITWNALMSVYAKKGDVASTFTLFKDMQR 263
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F + + +LN + R +F +T +++ A T+ +L A +
Sbjct: 331 DIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNT-VDVNADTYVVLLSALAEYS 389
Query: 91 APERG----KQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
E G + VH M++ G TD + V L++MY+K G + + + F+ +E D ++W
Sbjct: 390 ISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQLMEATDRISW 449
Query: 146 NALLSSFLRHGLAKEA 161
N ++S+ ++G +EA
Sbjct: 450 NTIISALDQNGNCEEA 465
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F++ GD + N+ + + +S N +F M+ ++ +TF + A S
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
++GKQVHA++ K G DSE V AL+ MY+K G + ++ + F E+ K+ V+WNA+++++
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+HG EA F M V
Sbjct: 769 SKHGFGSEALDSFDQMIHSNV 789
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S + + YT+ F M + T + AC+ L A + G+Q+H
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A G S+ + AL+ +YS+ G + ES AF++ E D + WNAL+S F + G +
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 160 EAFGVFQAMTRERVE 174
EA VF M RE ++
Sbjct: 675 EALRVFVRMNREGID 689
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D SS + + +++ LFC M+ + T Y F+ VL AC +
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G+Q+H L++K G S+ V AL+ +Y G L + F + +D VT+N L++
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ G ++A +F+ M + +E
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLE 386
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +F +S D + N+ + ++ LF MH L + T ++ AC
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
SA RG+Q+HA K G S ++ AL+++Y+K + +++ F E E ++VV WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
+L ++ + +F +F+ M E +
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +Y + ++ +F M + YT+ +L C L E G+Q+H+ +IK
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
V + L+DMY+K G L + + KDVV+W +++ + ++ +A
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 165 FQAM 168
F+ M
Sbjct: 579 FRQM 582
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGAC-SA 88
+VFDE+ + + N ++ SRN + LF M S + TF+ VL AC
Sbjct: 141 KVFDEMPERTIFTWN-KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A + +Q+HA ++ G VV L+D+YS+ G + + F + KD +W A+
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S ++ EA +F M
Sbjct: 260 ISGLSKNECEAEAIRLFCDM 279
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G+++H+ ++K G DS + L D Y G L + + F E+ + + TWN ++
Sbjct: 102 DEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 161
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
L E FG+F M E V
Sbjct: 162 ASRNLIGEVFGLFVRMVSENV 182
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI+DA + F E+S + S N+ + +Y++ F M + +
Sbjct: 740 CGSISDA--------EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 75 TAYTFTPVLGACSALPAPERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL ACS + ++G ++ + G +P ++DM ++ GLL + E
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 134 FKEIEFK-DVVTWNALLSSFLRH 155
+E+ K D + W LLS+ + H
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVH 874
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 71/112 (63%), Gaps = 1/112 (0%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F MHS+ T +TF VL ACS + A GKQ H LM+K G +++ VK+AL+DMY+
Sbjct: 313 MFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKSALVDMYA 372
Query: 123 KYGLLGESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K G +G++ + F ++ + DVV W A+++ +++G +EA ++ M ++ +
Sbjct: 373 KCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGI 424
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ++D D+ + + + ++ L+ M + + T T VL AC+ L
Sbjct: 385 HQLYDV---DDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACL 441
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + GKQ+HA ++K V TAL MYSK G L +S+ F+ + +DV++WN+++
Sbjct: 442 AALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSII 501
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S F +HG +A +F+ M E
Sbjct: 502 SVFSQHGRGSDALDMFEEMKLE 523
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSAL 89
+VFD + H + S + + Y + + LF M C L + T VL A S
Sbjct: 179 RVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEFVTTAVLSAVSVP 238
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G Q+H L++K G V+ +L+ MY+K + ++ F + ++ +TW+A++
Sbjct: 239 LGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMI 298
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + ++G A A +F M
Sbjct: 299 TGYAQNGEANCAARMFLQM 317
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 89 LPAPERGKQVHALMIK--GGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
+P+ G HAL K S V V TAL++MY K G + ++ F + ++ V+W
Sbjct: 133 VPSASAGAVTHALACKLPSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSW 192
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR----ERVEF 175
A++S + ++EAF +F+ M + E+ EF
Sbjct: 193 AAMVSGYATGKCSEEAFELFRLMLQKCPLEKNEF 226
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESVEAFKEI--EFK 140
A S+ P G+ +H +K G S V +L+ Y LLG + F +I +
Sbjct: 23 AASSDRTPRTGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALR 82
Query: 141 DVVTWNALLSSFLRH 155
DV +WN+LL+ RH
Sbjct: 83 DVASWNSLLNPLSRH 97
>gi|115451189|ref|NP_001049195.1| Os03g0185200 [Oryza sativa Japonica Group]
gi|113547666|dbj|BAF11109.1| Os03g0185200 [Oryza sativa Japonica Group]
Length = 473
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A+ R ++FD + D+ S N+ + + + W F M + + A T
Sbjct: 174 AMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGEAWDCFREMRARGVRGNARTAV 233
Query: 81 PVLGACSALPAPERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
VLGAC E G+QVH M++ G + S ++ ALM+MYS+ G + + F EIE
Sbjct: 234 AVLGACDL----ESGRQVHGHMVRNHGDSGSNAILWNALMNMYSRVGCVDNAEHVFFEIE 289
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KDVV+WN ++ +F ++G + A + AM R
Sbjct: 290 RKDVVSWNVMIGAFAKNGHGERALELVDAMLR 321
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 18/170 (10%)
Query: 8 TNFPAKTCISIADALPKRYVYTHQVFDEISH---GDLSSLNSQLFSYTRSRNFPATWALF 64
++ PA + A +L + F I H G +++ S L + R R AL
Sbjct: 60 SSLPASNALVSAYSLSGLLPCALRAFSLIPHPSTGSYTAILSALSRHGRPRE-----ALS 114
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK------TALM 118
+ + A + V+ C A + HA +K + P++ AL+
Sbjct: 115 LFSAAAVARPDAELLSCVVSCCRRASASLPARAAHAYGVK----TAPLLAFYASAGPALV 170
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+Y+ G + + F ++ +DVV+WNA++ F G+ EA+ F+ M
Sbjct: 171 ALYAMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGEAWDCFREM 220
>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
Length = 818
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 75/131 (57%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ S N + Y + +F L+ + T TF +LGACS++
Sbjct: 263 EVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVK 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+ VH+ +++ G DSE V TAL++MY+K G L E+ + F ++ +D V W+ L+
Sbjct: 323 ALAQGRLVHSHILERGLDSEVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIG 382
Query: 151 SFLRHGLAKEA 161
++ +G K+A
Sbjct: 383 AYASNGYGKDA 393
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSAL 89
+VFD + D S N+ + +Y ++ A +F M L A TF VL AC++L
Sbjct: 398 KVFDRLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASL 457
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K +HA + + +S VV L++MY++ G L E+ F + K VV+W A++
Sbjct: 458 GRLSEVKALHAQISESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMV 517
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
++F ++G EA +FQ M E V+
Sbjct: 518 AAFSQYGRYAEALDLFQEMDLEGVK 542
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 17 SIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
S+A+AL Y ++F + D +S N+ + ++++S ++ +F M
Sbjct: 143 SLANALVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEMKCD 202
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
+ + T+ V+ S G+++HA ++ G D++ VV TAL++MY K G E+
Sbjct: 203 -VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVANGFDTDLVVATALINMYGKCGSSHEA 261
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E F +++ +D+V+WN ++ ++ +G EA ++Q + E
Sbjct: 262 REVFDKMKKRDMVSWNVMIGCYVLNGDFHEALELYQKLDME 302
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 5 IRMTNFPAKTCISIADALPKRY------VYTHQVFDEIS--HGDLSSLNSQLFSYTRSRN 56
IR + F T + +AL Y V VF+ + ++ S N+ + +Y ++ +
Sbjct: 33 IRCSRFERDTMV--GNALISMYGKCDSLVDARSVFESMDWRQRNVVSWNAMIAAYAQNGH 90
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
L+ M+ L TF VLGACS+L +G+++H + G DS + A
Sbjct: 91 STEALVLYWRMNLQGLGTDHVTFVSVLGACSSLA---QGREIHNRVFYSGLDSFQSLANA 147
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L+ MY+++G +G++ F+ ++ +D +WNA++ + + G A +F+ M
Sbjct: 148 LVTMYARFGSVGDAKRMFQSLQTRDETSWNAVILAHSQSGDWSGALRIFKEM 199
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 53/94 (56%), Gaps = 2/94 (2%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL +CS+ G+ +H + + + +V AL+ MY K L ++ F+ +
Sbjct: 9 TFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARSVFESM 68
Query: 138 EF--KDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
++ ++VV+WNA+++++ ++G + EA ++ M
Sbjct: 69 DWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMN 102
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F++ GD + N+ + + +S N +F M+ ++ +TF + A S
Sbjct: 632 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANM 691
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
++GKQVHA++ K G DSE V A++ MY+K G + ++ + F E+ K+ V+WNA+++++
Sbjct: 692 KQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVSWNAMINAY 751
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+HG EA F M V
Sbjct: 752 SKHGFGSEALDSFDQMIHSNV 772
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
T + AC+ L A + G+Q+HA G S+ + AL+ +YSK G + E+ AF++ E
Sbjct: 577 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
D + WNAL+S F + G +EA VF M RE ++
Sbjct: 637 AGDNIAWNALVSGFQQSGNNEEALRVFARMNREGID 672
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D SS + + +++ LFC M+ + T Y F+ VL AC +
Sbjct: 226 RVFDGLYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 285
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G+Q+H L++K G S+ V AL+ +Y G L + F + +D VT+N L++
Sbjct: 286 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLIN 345
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ G ++A +F+ M + +E
Sbjct: 346 GLSQCGYGEKAMELFKRMQLDGLE 369
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +Y + ++ +F M + YT+ +L C L E G+Q+H+ +IK
Sbjct: 442 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 501
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
V + L+DMY+K G L + + KDVV+W +++ + ++ +A
Sbjct: 502 TSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 561
Query: 165 FQAM 168
F+ M
Sbjct: 562 FRQM 565
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 68/147 (46%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +F +S D + N+ + ++ LF M L + T ++ AC
Sbjct: 323 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVAC 382
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+ G+Q+HA K G S ++ AL+++Y+K + ++ F E E ++VV WN
Sbjct: 383 SSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWN 442
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
+L ++ + +F +F+ M E +
Sbjct: 443 VMLVAYGLLDDLRNSFRIFRQMQIEEI 469
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGAC-SA 88
+VFDE+ + + N ++ SR+ + LF M + + TF+ VL AC
Sbjct: 124 KVFDEMPERTIFTWN-KMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A + +Q+HA +I G +V L+D+YS+ G + + F + KD +W A+
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S ++ EA +F M
Sbjct: 243 ISGLSKNECEVEAIRLFCDM 262
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 42/81 (51%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G+++H+ ++K G D+ + L+D Y G L +++ F E+ + + TWN ++
Sbjct: 85 DEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWNKMIKEL 144
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
L+ + F +F M E V
Sbjct: 145 ASRSLSGKVFCLFGRMVNENV 165
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++FDEI D+ S N+ + Y + N+ LF M T + T VL AC+
Sbjct: 189 HKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQS 248
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH+ + G + AL+D+YSK G L + F+ + KDV++WN L+
Sbjct: 249 GSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLI 308
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 309 GGYTHMNLYKEALLLFQDMLR 329
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +S+ D+ S N+ + YT + LF M + T +L AC+ L A
Sbjct: 292 LFQGLSNKDVISWNTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGA 351
Query: 92 PERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H + K G + ++T+L+DMY+K G + + + F + + + +WNA++
Sbjct: 352 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMI 411
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F HG A AF +F M + +E
Sbjct: 412 FGFAMHGRANAAFDIFSRMRKNGIE 436
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VFD I L N+ + S + + L+ M S L +YTF
Sbjct: 51 DGLP----YAISVFDTIQEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTF 106
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA------ 133
+L +C+ A + G+Q+H ++K G D + + T+L+ MY + G L ++ +
Sbjct: 107 PFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSH 166
Query: 134 -------------------------FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F EI KDVV+WNA +S + G KEA +F+ M
Sbjct: 167 RDVVSYTALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKM 226
Query: 169 TRERV 173
+ V
Sbjct: 227 MKTNV 231
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 8/132 (6%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFD + + LSS N+ +F + A + +F M + TF +L ACS
Sbjct: 393 QQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHS 452
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK----TALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
+ G+ + M + D + + K ++D+ GL E+ + +E + D V
Sbjct: 453 GMLDLGRHIFRSMTR---DYKLMPKLEHYGCMIDLXGHSGLFKEAEKMINTMEMEPDGVI 509
Query: 145 WNALLSSFLRHG 156
W +LL + HG
Sbjct: 510 WCSLLKACKMHG 521
>gi|224066771|ref|XP_002302207.1| predicted protein [Populus trichocarpa]
gi|222843933|gb|EEE81480.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 1/154 (0%)
Query: 19 ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYT 78
A A+ R ++FDE+ ++ S N+ L Y RS + M T N+ T
Sbjct: 334 AYAMSGRMREARELFDEMPERNMVSYNALLAGYIRSLQWEEALDFVYLMCRTTENIDHIT 393
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI- 137
F +L CS L + GKQVH + + G S V+ AL+DMY K G L + F ++
Sbjct: 394 FQLMLNVCSGLSDVDMGKQVHGFIYRHGWLSNTVIGNALLDMYCKCGNLRSAGVWFHQMK 453
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +D V+WN LL+S+ R ++++A +F+ M E
Sbjct: 454 QSRDSVSWNVLLTSYARRQMSEQAMSIFREMQWE 487
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D S N+ + + + + F MH + TF+ L AC +
Sbjct: 113 ELFDEMPQRDGGSWNAMIRACLQCVRPEKALSYFGDMHKQGVYANEVTFSSALRACGDVL 172
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+Q+H L++K G +V ++L+D+Y K G + ES F EIE + VTWN ++
Sbjct: 173 ELCLSRQIHGLIVKYGFCGNVIVGSSLVDVYGKCGAMSESRRIFDEIENPNNVTWNIIVR 232
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+L G EA +F M R ++
Sbjct: 233 RYLEVGDENEAVVMFFKMFRAKL 255
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D S N L SY R + ++F M + F +L AC+ A ++GKQ+H
Sbjct: 457 DSVSWNVLLTSYARRQMSEQAMSIFREMQWE-TKPHKFIFATLLAACANTFALDQGKQIH 515
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
MI+ G D + V+ AL+DMYSK L ++ F+E + +D+V WN+++ G K
Sbjct: 516 GFMIRNGYDIDTVIAGALLDMYSKCRCLEYALIVFREADKRDLVLWNSMILGCCHLGRGK 575
Query: 160 EAFGVFQAMTRE 171
A +F M E
Sbjct: 576 LALRLFGFMEEE 587
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++FDEI + + + N + Y + +F M L +YTF+ L ACS
Sbjct: 212 SRRIFDEIENPNNVTWNIIVRRYLEVGDENEAVVMFFKMFRAKLRPLSYTFSNALVACSD 271
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A + G Q+H + K + E VV ++L+DMY K G + + F +D+++W ++
Sbjct: 272 MRAVKEGMQIHGVATKINFEEEEVVLSSLIDMYVKCGEIESARRVFDLPGSRDLISWTSM 331
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S++ G +EA +F M
Sbjct: 332 VSAYAMSGRMREARELFDEM 351
>gi|410110051|gb|AFV61105.1| pentatricopeptide repeat-containing protein 81, partial [Priva
cordifolia]
Length = 381
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 89/167 (53%), Gaps = 8/167 (4%)
Query: 17 SIADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
I++AL Y+ ++ ++F+ I DL S N+ L +++ LF ++H
Sbjct: 197 QISNALISMYLKSNSQNMEDALKIFEHIDVKDLVSWNTILSGLSQNGLSENALMLFQHVH 256
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
L + YTF VL +CS L + G+Q+H L++K + V +AL+ MYSK G++
Sbjct: 257 LDHLVIDQYTFAAVLRSCSDLATLKLGQQIHVLVVKTAFEGNEYVASALIFMYSKCGIIE 316
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ E+F+ + VTWN+++ ++ +HG K A +F MT V+
Sbjct: 317 DARESFEASQQNSSVTWNSIIFAYAQHGQGKIALDLFYLMTERHVKL 363
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L + AYT + V+ AC GK +H
Sbjct: 125 DLVTWNSMLAAYLEHNLEECGFDIFLEMVRQSLEMDAYTLSTVISACFGDEKQSLGKSLH 184
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G + + AL+ MY K + ++++ F+ I+ KD+V+WN +LS ++GL
Sbjct: 185 CLVIKKGLEQVTQISNALISMYLKSNSQNMEDALKIFEHIDVKDLVSWNTILSGLSQNGL 244
Query: 158 AKEAFGVFQ 166
++ A +FQ
Sbjct: 245 SENALMLFQ 253
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A +R ++VF + ++ S N+ + Y N LF M + TF
Sbjct: 4 AKCRRVEDANKVFKYMQMRNMVSWNALIGGYAEVGNLHRCIELFVDMEMEGVRGDDATFA 63
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-F 139
PVL E +Q+H ++K G + E V A + Y++ G + ++ F +
Sbjct: 64 PVLALLYDAELYELARQIHGKIMKRGLEHENTVLNATITAYAECGCIQDAKRVFDSADGC 123
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+D+VTWN++L+++L H L + F +F M R+ +E
Sbjct: 124 RDLVTWNSMLAAYLEHNLEECGFDIFLEMVRQSLEM 159
>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
Length = 497
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 80/148 (54%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A R + FD + +L S N+ + Y ++ + LF + T + ++A+TF
Sbjct: 70 ARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFA 129
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L +++ A +G+Q+H ++KGG S + AL+ MYS+ G + + + F E+E +
Sbjct: 130 SLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDR 189
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+V++W ++++ F +HG A A +F M
Sbjct: 190 NVISWTSMITGFAKHGFATRALEMFHKM 217
>gi|125542681|gb|EAY88820.1| hypothetical protein OsI_10293 [Oryza sativa Indica Group]
Length = 671
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A+ R ++FD + D+ S N+ + + + W F M + + A T
Sbjct: 174 AMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGEAWDCFRVMRARGVRGNARTAV 233
Query: 81 PVLGACSALPAPERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
VLGAC E G+QVH M++ G + S ++ ALM+MYS+ G + + F EIE
Sbjct: 234 AVLGACDL----ESGRQVHGHMVRNHGDSGSNAILWNALMNMYSRVGCVDNAEHVFFEIE 289
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KDVV+WN ++ +F ++G + A + AM R
Sbjct: 290 RKDVVSWNVMIGAFAKNGHGERALELVDAMLR 321
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 18/170 (10%)
Query: 8 TNFPAKTCISIADALPKRYVYTHQVFDEISH---GDLSSLNSQLFSYTRSRNFPATWALF 64
++ PA + A +L + F I H G +++ S L + R R AL
Sbjct: 60 SSLPASNALVSAYSLSGLLPCALRAFSLIPHPSTGSYTAILSALSRHGRPRE-----ALS 114
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK------TALM 118
+ + A + V+ C A + HA +K + P++ AL+
Sbjct: 115 LFSAAAVARPDAELLSCVVSCCRRASASLPARAAHAYGVK----TAPLLAFYASAGPALV 170
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+Y+ G + + F ++ +DVV+WNA++ F G+ EA+ F+ M
Sbjct: 171 ALYAMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGEAWDCFRVM 220
>gi|410109965|gb|AFV61062.1| pentatricopeptide repeat-containing protein 81, partial [Aloysia
herrerae]
Length = 399
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ + DL S N+ L +++ LF +H
Sbjct: 198 ISNALISMYLKSNSRNVEDALKIFEHXTVKDLVSWNTILTGLSQNGLSEIALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 258 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVSSALIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 ARESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERHIKL 363
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 73/140 (52%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + + +F M L + AYT + ++ AC
Sbjct: 115 RVFDS-SDGFRDLVTWNSMLAAYLEYKLEECGFNIFLEMVXQRLEMDAYTLSSIISACFE 173
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H L+IK G D + AL+ MY K + ++++ F+ KD+V+WN
Sbjct: 174 DSQQSLGKSLHGLVIKKGLDQVTQISNALISMYLKSNSRNVEDALKIFEHXTVKDLVSWN 233
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 234 TILTGLSQNGLSEIALRLFQ 253
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R + VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 7 RRVEDANNVFMYMQERNTVSWNALIGGYAEMCNLQRCIELFMCMEMEGVKVDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + ++ F + F+D+
Sbjct: 67 TLLYDAESYDLTRQLHGKIMKRGLEHENTVLNATITAYAECGCIEDAKRVFDSSDGFRDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L + L + F +F M +R+E
Sbjct: 127 VTWNSMLAAYLEYKLEECGFNIFLEMVXQRLEM 159
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 78/138 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + +L S N+ + Y ++ + LF + T + ++A+TF +L +++
Sbjct: 392 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 451
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+Q+H ++KGG S + AL+ MYS+ G + + + F E+E ++V++W ++++
Sbjct: 452 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 511
Query: 151 SFLRHGLAKEAFGVFQAM 168
F +HG A A +F M
Sbjct: 512 GFAKHGFATRALEMFHKM 529
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VF+++ ++ S + + +Y +S LFC M S + ++F+ VL AC
Sbjct: 288 SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 347
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L P G+QV++ +K G S V +L+ MY++ G + ++ +AF + K++V++NA
Sbjct: 348 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 407
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + ++ ++EAF +F +
Sbjct: 408 IVDGYAKNLKSEEAFLLFNEI 428
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY---GLLGESVEA 133
+T++ VL AC+ L GKQ+H+ +I+ G + V +L+DMY+K G + +S +
Sbjct: 232 FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 291
Query: 134 FKEIEFKDVVTWNALLSSFLRHG-LAKEAFGVFQAM 168
F+++ +V++W A+++++++ G KEA +F M
Sbjct: 292 FEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 327
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSK-YGLLGESVEAF 134
Y F V+ ACS G+ ++ ++K G +++ V L+DM+ K G LG + + F
Sbjct: 129 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 188
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ +++VTW +++ F + G A++A +F M
Sbjct: 189 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 222
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T++ +L +C + GK VH +++ G + + VV L+ +YSK G + F+ +
Sbjct: 28 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 87
Query: 138 EFK-DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K D+V+W+A++S F + + +A F M
Sbjct: 88 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 119
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 78/138 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + +L S N+ + Y ++ + LF + T + ++A+TF +L +++
Sbjct: 217 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 276
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+Q+H ++KGG S + AL+ MYS+ G + + + F E+E ++V++W ++++
Sbjct: 277 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 336
Query: 151 SFLRHGLAKEAFGVFQAM 168
F +HG A A +F M
Sbjct: 337 GFAKHGFATRALEMFHKM 354
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VF+++ ++ S + + +Y +S LFC M S + ++F+ VL AC
Sbjct: 113 SRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 172
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L P G+QV++ +K G S V +L+ MY++ G + ++ +AF + K++V++NA
Sbjct: 173 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 232
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + ++ ++EAF +F +
Sbjct: 233 IVDGYAKNLKSEEAFLLFNEI 253
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY---GLLGESVEA 133
+T++ VL AC+ L GKQ+H+ +I+ G + V +L+DMY+K G + +S +
Sbjct: 57 FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 116
Query: 134 FKEIEFKDVVTWNALLSSFLRHG-LAKEAFGVFQAM 168
F+++ +V++W A+++++ + G KEA +F M
Sbjct: 117 FEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM 152
>gi|326522825|dbj|BAJ88458.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 551
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGD-LSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F + +GD + S N+ + + RS LF M + L T+ T T VL AC+ L
Sbjct: 180 MFGRVPNGDCVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKPTSVTVTSVLSACALLG 239
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G+ +H + K G DS V TAL+DMY K G L ++++ F+ +E +D W+ ++
Sbjct: 240 ALELGRWIHEYVRKAGLDSLVKVNTALIDMYGKCGSLEDAIDVFQGMESRDRQAWSVMIV 299
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ H +EA +F+ M ++ +
Sbjct: 300 AYANHSYGREAISLFEEMKKQGI 322
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 21 ALPKRYVYTHQVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWA-LFCYMHSTCLNLTAYT 78
A P Y QVFD I + GD+ N+ L Y RS + A A + M + YT
Sbjct: 66 AAPAHLAYARQVFDRIPTPGDVVWYNTLLRGYARSSDGAAEAARVLARMLEEGVAPDTYT 125
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F +L AC+A A E G+Q H + +K G V L++MY++ G + F +
Sbjct: 126 FVSLLKACAAARAGEEGRQAHGVAVKTGAADHEYVLPTLINMYAECGDARSARAMFGRVP 185
Query: 139 FKD-VVTWNALLSSFLRHGLAKEAFGVFQAM 168
D VV++NA++++ +R EA +F+ M
Sbjct: 186 NGDCVVSYNAMITAAVRSSRPGEALVLFREM 216
>gi|359493640|ref|XP_002282675.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Vitis vinifera]
Length = 464
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 82/143 (57%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F ++ + D+ S + + Y++++ F A+F M + ++ T ++ AC+ L A
Sbjct: 129 LFSQMPNRDIISWTTMIACYSQNKQFREALAVFNEMQTNGIDPDEVTMATIISACAHLGA 188
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK++H ++ G D + + +AL+DMY+K G L +S+ F ++ K++ WN+++
Sbjct: 189 LDLGKEIHLYAMEMGFDLDVYIGSALIDMYAKCGSLDKSLVVFFKLRKKNLFCWNSIIEG 248
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG A+EA +F M RE+++
Sbjct: 249 LAVHGYAEEALAMFSRMQREKIK 271
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T++TF+ ++ ACS + G+ VH + K G DS V+TAL+D Y G + E+ F
Sbjct: 9 TSFTFSSLVKACSLVSELGFGEAVHGHIWKYGFDSHVFVQTALVDFYGNAGKIVEARRVF 68
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E+ +DV W ++S R G A +F M
Sbjct: 69 DEMSERDVFAWTTMISVHARTGDMSSARQLFDEM 102
>gi|410109973|gb|AFV61066.1| pentatricopeptide repeat-containing protein 81, partial
[Citharexylum montevidense]
Length = 366
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +AL Y+ ++ + F ++ DL S N+ L + + LF MH
Sbjct: 178 ICNALTSMYLKSNSQNIDDALKXFQQMDLKDLVSWNTILTGLSXNGLSENALRLFQQMHL 237
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L L YTF VL +CS L + G+Q+H L +K G + V +AL+ MYSK G++ +
Sbjct: 238 DYLVLDQYTFAAVLRSCSDLATLQLGRQIHVLAVKSGFEGNEYVASALIFMYSKCGIIED 297
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ ++F++ + + VTWN+++ ++ +HG K A +F M ++++
Sbjct: 298 AWDSFEDSQKESXVTWNSIIFAYAQHGQGKIALDLFYLMXEKQIKI 343
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N LF M + + TF P+L + E +Q+H +
Sbjct: 9 SWNALIGGYAEMGNLKJCIDLFLDMEMEGVEVDDATFAPILALLDDDESYELXRQLHGKI 68
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V A + YS+ G + ++ F + F+D+VTWN++L+++L H L +
Sbjct: 69 MKCGLELENTVLNATIAAYSECGCITDAKRVFDSADGFRDLVTWNSMLAAYLEHDLEECG 128
Query: 162 FGVFQAMTRERVEF 175
F +F M R+R+E
Sbjct: 129 FDIFLEMVRKRLEL 142
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + +F M L L AYT T ++ AC GK +H
Sbjct: 108 DLVTWNSMLAAYLEHDLEECGFDIFLEMVRKRLELDAYTLTSIISAC---FGDAHGKSLH 164
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G + + AL MY K + ++++ F++++ KD+V+WN +L+ +GL
Sbjct: 165 GLVIKMGLEQVTQICNALTSMYLKSNSQNIDDALKXFQQMDLKDLVSWNTILTGLSXNGL 224
Query: 158 AKEAFGVFQAM 168
++ A +FQ M
Sbjct: 225 SENALRLFQQM 235
>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
Length = 559
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++D IS DL S + + YT RN+ LFC +H L + + VL C+++
Sbjct: 271 IYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVA 330
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+HA M K + + + AL+DMY+K G ++ AF E+ +++V++W +L++
Sbjct: 331 SARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLIT 390
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R+G ++A +F M + V
Sbjct: 391 ACGRNGSGEDAVTLFNRMVEDGVR 414
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + H + S + + Y R+ LF M ++ +T+ AC+
Sbjct: 67 RKMFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGA 126
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+QVHA KG + V++ALMDM+ + G + ++ + F E+ KDVV+WNAL+
Sbjct: 127 GCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALI 186
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
F+ G +A G+F +M +E
Sbjct: 187 RGFVERGHDGDALGLFSSMLKE 208
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVE 132
TA ++ +L C + A +GK VH + + S P + T L+ Y+++G + + +
Sbjct: 10 TAPFYSSLLQCCISSCAFRQGKSVHG-RVAAASASPPDLHLSTKLIIFYARFGDVAAARK 68
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + + VV+W A++S + R+G +EA +F M
Sbjct: 69 MFDGMPHRSVVSWTAMVSGYARNGRPREALELFALM 104
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA Q+F E+ D+ S N+ + + + LF M +
Sbjct: 161 CGSVEDA--------RQLFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIP 212
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
YT L AC + + +H+ +IK G E VV +L++ Y+K + + +
Sbjct: 213 DHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIY 272
Query: 135 KEIEFKDVVTWNALLSSF-LRHGLAKEAFGVFQAMTRE 171
I D+V+ AL+S + + +++A +F + R+
Sbjct: 273 DSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRK 310
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 78/138 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + +L S N+ + Y ++ + LF + T + ++A+TF +L +++
Sbjct: 410 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 469
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+Q+H ++KGG S + AL+ MYS+ G + + + F E+E ++V++W ++++
Sbjct: 470 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 529
Query: 151 SFLRHGLAKEAFGVFQAM 168
F +HG A A +F M
Sbjct: 530 GFAKHGFATRALEMFHKM 547
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VF+++ ++ S + + +Y +S LFC M S + ++F+ VL AC
Sbjct: 306 SRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 365
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L P G+QV++ +K G S V +L+ MY++ G + ++ +AF + K++V++NA
Sbjct: 366 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 425
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + ++ ++EAF +F +
Sbjct: 426 IVDGYAKNLKSEEAFLLFNEI 446
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY---GLLGESVEA 133
+T++ VL AC+ L GKQ+H+ +I+ G + V +L+DMY+K G + +S +
Sbjct: 250 FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 309
Query: 134 FKEIEFKDVVTWNALLSSFLRHG-LAKEAFGVFQAM 168
F+++ +V++W A+++++++ G KEA +F M
Sbjct: 310 FEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKM 345
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSK-YGLLGESVEAF 134
Y F V+ ACS G+ ++ ++K G +++ V L+DM+ K G LG + + F
Sbjct: 147 YCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVF 206
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ +++VTW +++ F + G A++A +F M
Sbjct: 207 DKMPERNLVTWTLMITRFAQLGCARDAIDLFLDM 240
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T++ +L +C + GK VH +++ G + + VV L+ +YSK G + F+ +
Sbjct: 46 TYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGM 105
Query: 138 EFK-DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K D+V+W+A++S F + + +A F M
Sbjct: 106 GNKRDLVSWSAMVSCFANNSMEWQAIWTFLDM 137
>gi|255569195|ref|XP_002525566.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535145|gb|EEF36825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ ++L Y QV F+ + + L S N+ + Y ++ FC M S
Sbjct: 379 VSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILGYAQNGRLNEALNFFCEMQS 438
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ ++T V+ A + L P + K +H L+I+ D V TAL+DMY+K G +
Sbjct: 439 QNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRLLDDTVFVMTALVDMYAKCGAIHT 498
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F + + V+TWN+++ ++ HGL KEA +F M + ++
Sbjct: 499 ARKLFNMMSERHVITWNSMIDAYGTHGLGKEAVQLFVEMQKGTIK 543
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA +++FD ++ DL N+ + Y ++ L +
Sbjct: 190 CRVIGDA--------YKMFDRMTERDLVCWNTIISGYAQNGLTKVALELVPKIFEEGHRP 241
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T VL A + + + GK +HA +I+ G D + TAL+DMYSK LG + F
Sbjct: 242 DSVTIVSVLPAVADIRSLRFGKAIHAYVIRAGFDWLVNISTALVDMYSKCDSLGTARVIF 301
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + VVTWN++++ + +G +EA +F+ M E ++
Sbjct: 302 DGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQ 341
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I + + ++ L + ++ + + FC M + Y FT +L C
Sbjct: 97 RVFEPIENKLEALYHTMLKGFAKNSSLDSALLFFCRMKHDNVRPVVYNFTYLLTLCGDNF 156
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
RGK++H +I G TA++ +Y K ++G++ + F + +D+V WN ++S
Sbjct: 157 DLRRGKEIHGQLITSGFSWNLFAMTAVVSLYCKCRVIGDAYKMFDRMTERDLVCWNTIIS 216
Query: 151 SFLRHGLAKEAF 162
+ ++GL K A
Sbjct: 217 GYAQNGLTKVAL 228
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + + NS + + + LF M L T T VL AC+
Sbjct: 300 IFDGMGSRTVVTWNSMIAGCVENGDPEEAKVLFKKMMDEGLQPTDVTVMEVLHACADSGD 359
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VH L+ DS V +L+ MYSK + + F+ ++ + +V+WNA++
Sbjct: 360 LEQGKFVHKLVEDLKLDSNVSVMNSLISMYSKCKQVDFAANLFENLQNRTLVSWNAMILG 419
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ ++G EA F M + ++
Sbjct: 420 YAQNGRLNEALNFFCEMQSQNIK 442
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 55/121 (45%), Gaps = 20/121 (16%)
Query: 68 HSTCLN-LTAYTFTP----------VLGACSALPAPERGKQVHALM---IKGGTDSEPVV 113
HST +N L T+ P +L C+++ K++H ++ IK G SE +
Sbjct: 25 HSTTINTLPRRTYIPGHIYKHPTAVLLELCTSV------KELHQIIPSIIKNGFYSEELF 78
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+T L+ ++ YG L E+ F+ IE K ++ +L F ++ A F M + V
Sbjct: 79 QTKLISLFCNYGSLTEAARVFEPIENKLEALYHTMLKGFAKNSSLDSALLFFCRMKHDNV 138
Query: 174 E 174
Sbjct: 139 R 139
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%), Gaps = 5/150 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F I + S N + Y LF M + + A TFT VL ACS L
Sbjct: 364 NIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLA 423
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+G+++H L+I+ D+ VV AL+DMY+K G + E+ FK + +D+V+W ++++
Sbjct: 424 ALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 151 SFLRHGLAKEAFGVFQAMTR-----ERVEF 175
++ HG A A +F M + +RV F
Sbjct: 484 AYGSHGQAYVALELFAEMLQSNMKPDRVTF 513
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+E+ D++ N+ + Y +S NF F M + T T + +C+ L
Sbjct: 163 LFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
RG ++H +I G + + +AL+DMY K G L ++E F+++ K VV WN+++S
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISG 282
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ G + +F+ M E V+
Sbjct: 283 YGLKGDSISCIQLFKRMYNEGVK 305
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Query: 15 CISIADALPKRYVYTHQ--VFDEISH-GDLSSLNSQLFSYTRSRNFPATWALF-CYMHST 70
C ++ + ++Y H VFD + + ++S N + YT++ + LF +H
Sbjct: 41 CKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYP 100
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
L +YT+ VL AC L GK +H ++K G + VV ++L+ MY+K ++
Sbjct: 101 YLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKA 160
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F E+ KDV WN ++S + + G KEA F M R
Sbjct: 161 IWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFGLMRR 200
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+++ + + NS + Y + + LF M++ + T T + ++ CS
Sbjct: 263 EVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSA 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH I+ S+ + ++LMD+Y K G + + FK I VV+WN ++S
Sbjct: 323 RLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMIS 382
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ G EA G+F M + VE
Sbjct: 383 GYVAEGKLFEALGLFSEMRKSYVE 406
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 78/138 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + +L S N+ + Y ++ + LF + T + ++A+TF +L +++
Sbjct: 212 KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 271
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+Q+H ++KGG S + AL+ MYS+ G + + + F E+E ++V++W ++++
Sbjct: 272 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMIT 331
Query: 151 SFLRHGLAKEAFGVFQAM 168
F +HG A A +F M
Sbjct: 332 GFAKHGFATRALEMFHKM 349
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VF+++ ++ S + + +Y +S LFC M S + ++F+ VL AC
Sbjct: 108 SRKVFEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACG 167
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L P G+QV++ +K G S V +L+ MY++ G + ++ +AF + K++V++NA
Sbjct: 168 NLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNA 227
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + ++ ++EAF +F +
Sbjct: 228 IVDGYAKNLKSEEAFLLFNEI 248
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY---GLLGESVEA 133
+T++ VL AC+ L GKQ+H+ +I+ G + V +L+DMY+K G + +S +
Sbjct: 52 FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 111
Query: 134 FKEIEFKDVVTWNALLSSFLRHG-LAKEAFGVFQAM 168
F+++ +V++W A+++++ + G KEA +F M
Sbjct: 112 FEQMPEHNVMSWTAIITAYAQSGECDKEAIELFCKM 147
>gi|356528451|ref|XP_003532816.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 579
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 85/173 (49%), Gaps = 2/173 (1%)
Query: 4 FIRM--TNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
F+RM N A+T + R +F EI DL S N + Y ++
Sbjct: 208 FVRMPQKNDVARTAMITGFCKEGRMEDARDLFQEIRCRDLVSWNIIMTGYAQNGRGEEAL 267
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LF M T + TF V AC++L + E G + HAL+IK G DS+ V AL+ ++
Sbjct: 268 NLFSQMIRTGMQPDDLTFVSVFIACASLASLEEGSKAHALLIKHGFDSDLSVCNALITVH 327
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
SK G + +S F +I D+V+WN ++++F +HGL +A F M V+
Sbjct: 328 SKCGGIVDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQ 380
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V + VF +ISH DL S N+ + ++ + + + F M + + TF +L AC
Sbjct: 334 VDSELVFGQISHPDLVSWNTIIAAFAQHGLYDKARSYFDQMVTVSVQPDGITFLSLLSAC 393
Query: 87 SALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
+ +LM+ G L+D+ S+ G L + + E+ FK D
Sbjct: 394 CRAGKVNESMNLFSLMVDNYGIPPRSEHYACLVDVMSRAGQLQRACKIINEMPFKADSSI 453
Query: 145 WNALLSSFLRH 155
W A+L++ H
Sbjct: 454 WGAVLAACSVH 464
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 79/169 (46%), Gaps = 32/169 (18%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA-- 88
++FDE++ D+ + NS L +Y ++ + ALF HS L ++ ++ AC
Sbjct: 50 KLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALF---HSMPLR-NVVSWNSIIAACVQND 105
Query: 89 ---------LPAPERGKQVHALMIKG------GTDSEPVVK----------TALMDMYSK 123
APE+ + +I G D++ + + TA++D Y++
Sbjct: 106 NLQDAFRYLAAAPEKNAASYNAIISGLARCGRMKDAQRLFEAMPCPNVVSYTAMVDGYAR 165
Query: 124 Y-GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G +G + F+ + ++ V+W +++ + +GL +EA+ VF M ++
Sbjct: 166 VEGGIGRARALFEAMPRRNSVSWVVMINGLVENGLCEEAWEVFVRMPQK 214
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S+ G + + + F E+ KDVVTWN++LS++ ++GL + + +F +M V
Sbjct: 40 SRAGKVDAARKLFDEMATKDVVTWNSMLSAYWQNGLLQRSKALFHSMPLRNV 91
>gi|297600629|ref|NP_001049519.2| Os03g0241800 [Oryza sativa Japonica Group]
gi|108707104|gb|ABF94899.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|255674356|dbj|BAF11433.2| Os03g0241800 [Oryza sativa Japonica Group]
Length = 810
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ L S N+ L YT + LF M + A T VL +C + A
Sbjct: 248 VFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 307
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK++H ++ + S +++ ALMDMY+ G L E+ + F + +DVV+W +++S+
Sbjct: 308 LSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISA 367
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ RHG +EA +F+ M + +E
Sbjct: 368 YGRHGHGREAIDLFEKMCGQGLE 390
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YT+ L +C+A G+Q+H+ + G D V + + MY++ G ++ + F+E
Sbjct: 123 YTYPLALKSCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEE 182
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
++++DVV+WNA++S F GL A VF+ +
Sbjct: 183 MQYRDVVSWNAMISGFAHAGLFGRAMDVFRELV 215
>gi|18873857|gb|AAL79803.1|AC079874_26 putative pentatricopeptide repeat domain containing protein [Oryza
sativa Japonica Group]
Length = 391
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ D I + S N+ L ++ ++ F M L +TF VL C+
Sbjct: 34 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 93
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L E GKQ+H +IK + + + L+DMY+K G + +S+ F+++E +D V+WNA+
Sbjct: 94 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAM 153
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+ + HGL EA +F+ M +E V
Sbjct: 154 ICGYALHGLGVEALRMFERMQKENV 178
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VH +IK G S+ V + ++DMY K G++ E+ + I + VV+WNA+LS F +
Sbjct: 2 VHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKE 61
Query: 158 AKEAFGVFQAM 168
++EA F M
Sbjct: 62 SEEAQKFFSEM 72
>gi|410109983|gb|AFV61071.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
canescens]
Length = 391
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ + DL S N+ L +++ LF +H
Sbjct: 198 ISNALVSMYLKSNSRNVEDALKIFERXNVKDLVSWNTILTGLSQNGLSENALRLFQNIHV 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 258 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERHIKL 363
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y +F M L + AYT + V+ AC
Sbjct: 115 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEECGVNIFLEMVRQRLEMDAYTLSSVISACFE 173
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +HAL+IK G D + AL+ MY K + ++++ F+ KD+V+WN
Sbjct: 174 DTQQSLGKSLHALVIKKGLDEVTQISNALVSMYLKSNSRNVEDALKIFERXNVKDLVSWN 233
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 234 TILTGLSQNGLSENALRLFQ 253
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + + S N+ + Y N +LF M + + TF P+L + +
Sbjct: 15 VFKYMRERNAVSWNALIGGYAEMGNLERCVSLFVGMERDGVRVDDATFAPLLTLLNDAES 74
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
+ +Q+H ++K G + E V A + Y++ + ++ F + ++D+VTWN++L+
Sbjct: 75 YDLTRQLHGKIMKHGLEYENTVLNATITAYAECRCIEDAKRVFDSSDGYRDLVTWNSMLA 134
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++L H L + +F M R+R+E
Sbjct: 135 AYLEHNLEECGVNIFLEMVRQRLEM 159
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 77/143 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + + D+ N+ +F ++ LF + + L +TF ++ S L +
Sbjct: 474 VFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVS 533
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q HA +IK G DS+ V AL+DMY+K G + E F+ KDV+ WN+++S+
Sbjct: 534 MFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSMIST 593
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A+EA VF+ M VE
Sbjct: 594 YAQHGQAEEALYVFRMMGGTGVE 616
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 72/137 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ ++ D S N+ + Y+R + +F M L + TF +LG S+ A
Sbjct: 373 VFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSA 432
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E KQ+H L++K GT + ++L+D+YSK+ L+ ++ F + +D+V WNA++
Sbjct: 433 IELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFG 492
Query: 152 FLRHGLAKEAFGVFQAM 168
++ +EA +F +
Sbjct: 493 LAQNEQGEEAVKLFNQL 509
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R ++FD + + +L S + + Y ++ A+F + + +L
Sbjct: 265 RLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILN 324
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C +L A +G+QVHA IK +S+ VK +L+DMY+K L E+ F+ + D ++
Sbjct: 325 SCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAIS 384
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
+NA++ + R G A VF M
Sbjct: 385 YNAMIEGYSRLGDLAGAIDVFSKM 408
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH--STCLNLTAYTFTPVLGACSA 88
++FD + H +L S S + + + ALF S + L AC+
Sbjct: 67 RLFDRMPHKNLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQ 126
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A G+QVH + ++ G D V TAL+++Y+K G + ++ F + K+ VTW A+
Sbjct: 127 SRAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAV 186
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
++ + + G A +F M + V
Sbjct: 187 ITGYSQIGQGGVALELFGKMGLDGV 211
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + + + + Y++ LF M + + + ACSAL
Sbjct: 171 VFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGF 230
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+Q H + +++ V AL+D+Y K L + + F +E +++V+W +++
Sbjct: 231 LEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAG 290
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++++ EA +F +++E
Sbjct: 291 YMQNSCDAEAMAMFWQLSQE 310
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
HA + G + + L+ YSK G + ++ F + K++V+W + +S +HG
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 159 KEAFGVFQAMTR 170
++A +F A R
Sbjct: 94 EDAVALFAAFQR 105
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 84/159 (52%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +L Y+ T +VFDE+ ++ S S L Y+ + + W LFC M
Sbjct: 128 VSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQY 187
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YT + V+ A G QVHA+++K G + V +L+ +YS+ G+L +
Sbjct: 188 EGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRD 247
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F ++E +D VTWN++++ ++R+G E F +F M
Sbjct: 248 ARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKM 286
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC-SAL 89
+VF+ I DL + ++ L Y ++ LF + + +TF+ V+ AC S
Sbjct: 449 KVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPT 508
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+GKQ HA IK ++ V +AL+ MY+K G + + E FK + +D+V+WN+++
Sbjct: 509 AAAEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMI 568
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +HG AK+A VF M + ++
Sbjct: 569 SGYSQHGQAKKALEVFDEMQKRNMD 593
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 30 HQVFDEISH--GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
H +FD+I H L N LFSY+R + LF + + L T + V C+
Sbjct: 45 HNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICA 104
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G+QVH +K G V T+L+DMY K + + F E+ ++VV+W +
Sbjct: 105 GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTS 164
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+ + +GL + +F M E V
Sbjct: 165 LLAGYSWNGLYGYVWELFCQMQYEGV 190
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ D + NS + Y R+ + +F M + T TF V+ +C++L
Sbjct: 251 VFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRE 310
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLS 150
K + +K G ++ +V TALM SK + +++ F + E K+VV+W A++S
Sbjct: 311 LALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMIS 370
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
L++G +A +F M RE V+
Sbjct: 371 GCLQNGGNDQAVNLFSQMRREGVK 394
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 4/112 (3%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + +T++ +L + P ++HA +IK + V TAL+D Y
Sbjct: 384 LFSQMRREGVKPNHFTYSAIL----TVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYV 439
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G ++V+ F+ IE KD++ W+A+L+ + + G +EA +F + +E ++
Sbjct: 440 KLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIK 491
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF DL S NS + Y++ +F M +++ A TF V+ AC+
Sbjct: 550 HEVFKRQKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHA 609
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKDVVT-WN 146
E+G++ MI P +K + ++D+YS+ G+L +++ E+ F T W
Sbjct: 610 GLVEKGQKYFNSMI-NDHHINPTMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWR 668
Query: 147 ALLSSFLRH 155
LL + H
Sbjct: 669 TLLGAARVH 677
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE S L+S N+ + Y ++ +LF M + T T +L AC+ L A
Sbjct: 365 LFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGA 424
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK VH L+ + +S V TAL+DMY+K G + E+ F + K+ VTWNA++S
Sbjct: 425 LSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISG 484
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG EA +F M RV
Sbjct: 485 YGLHGYGHEALNLFNEMLHSRV 506
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +I DL S N+ + YT + ++ LF + + + + + ++
Sbjct: 264 LFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFFPFGH 323
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ +H K G S V TAL +YS+ + + F E K + +WNA++S
Sbjct: 324 LHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG 383
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ ++GL ++A +FQ M + V
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEV 405
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +VFD + D N+ + ++ F +F M + + T VL
Sbjct: 156 RVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLP 215
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ L G + L +K G S V T L +YSK G + + F +I D+V+
Sbjct: 216 GVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIETARLLFGQIGQPDLVS 275
Query: 145 WNALLSSF 152
+NA++S +
Sbjct: 276 YNAMISGY 283
>gi|108706558|gb|ABF94353.1| Mitochondrial import inner membrane translocase subunit Tim17
family protein, expressed [Oryza sativa Japonica Group]
gi|125585187|gb|EAZ25851.1| hypothetical protein OsJ_09691 [Oryza sativa Japonica Group]
Length = 671
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A+ R ++FD + D+ S N+ + + + W F M + + A T
Sbjct: 174 AMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGEAWDCFREMRARGVRGNARTAV 233
Query: 81 PVLGACSALPAPERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
VLGAC E G+QVH M++ G + S ++ ALM+MYS+ G + + F EIE
Sbjct: 234 AVLGACDL----ESGRQVHGHMVRNHGDSGSNAILWNALMNMYSRVGCVDNAEHVFFEIE 289
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KDVV+WN ++ +F ++G + A + AM R
Sbjct: 290 RKDVVSWNVMIGAFAKNGHGERALELVDAMLR 321
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 18/170 (10%)
Query: 8 TNFPAKTCISIADALPKRYVYTHQVFDEISH---GDLSSLNSQLFSYTRSRNFPATWALF 64
++ PA + A +L + F I H G +++ S L + R R AL
Sbjct: 60 SSLPASNALVSAYSLSGLLPCALRAFSLIPHPSTGSYTAILSALSRHGRPRE-----ALS 114
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK------TALM 118
+ + A + V+ C A + HA +K + P++ AL+
Sbjct: 115 LFSAAAVARPDAELLSCVVSCCRRASASLPARAAHAYGVK----TAPLLAFYASAGPALV 170
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+Y+ G + + F ++ +DVV+WNA++ F G+ EA+ F+ M
Sbjct: 171 ALYAMCGRVSAAKRIFDRMDGEDVVSWNAMIGGFAGAGMNGEAWDCFREM 220
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R HQ F IS D NS + S +++ LF M + + L
Sbjct: 500 RLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALS 559
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ LPA GK++HA M++G S+ ++AL+DMYSK G L + F +E K+ V+
Sbjct: 560 ACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVS 619
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN++++++ HG K++ +F M + ++
Sbjct: 620 WNSIIAAYGNHGRLKDSLNLFHGMLGDGIQ 649
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 70/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D N L Y ++ ++ +F M T N + TF VL C++
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q+H L++ G + + V L+ MY+K G L ++ F + D+VTWN ++S
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISG 323
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++++G EA +F M R++
Sbjct: 324 YVQNGFMDEASCLFHEMISARMK 346
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD+ + D+ + + Y + +F ++ + + T VL AC+ L
Sbjct: 405 KIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLA 464
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK++H ++K G V +A+MDMY+K G L + + F I KD V WN++++
Sbjct: 465 ALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMIT 524
Query: 151 SFLRHGLAKEAFGVFQAM 168
S ++G +EA +F+ M
Sbjct: 525 SCSQNGKPEEAIDLFRQM 542
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + DL + N + Y ++ LF M S + + TF+ L S
Sbjct: 304 RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGA 363
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H +I+ G + +K+AL+D+Y K + + + F + D+V A++S
Sbjct: 364 TLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMIS 423
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +G+ A +F+ + +ER+
Sbjct: 424 GYVLNGMNNNALEIFRWLLQERMR 447
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L + G+ VH + G + + V ++L+ YS+ G + ++ F
Sbjct: 148 YTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR 207
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ KD V WN +L+ ++++G A GVF M R
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 81/145 (55%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF+ +++ DL S N+ L + S+ +F M +TF VL +CS+L
Sbjct: 207 NKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSL 266
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
PE GKQVHA +IK +D + V TAL+DMY+K L ++ AF + +D+ +W ++
Sbjct: 267 LDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARCLEDAGVAFDRLVNRDIFSWTVII 326
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + + A++A F+ M RE ++
Sbjct: 327 SGYAQTDQAEKAVKYFRQMQREGIK 351
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + + D+ S + Y ++ F M + YT L CS +
Sbjct: 311 FDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCSHMATL 370
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+Q+HA+ +K G + V +AL+D+Y K G + + FK + +D+V+WN ++S +
Sbjct: 371 ENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGLISRDIVSWNTIISGY 430
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+HG ++A F+ M E +
Sbjct: 431 SQHGQGEKALEAFRMMLSEGI 451
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 68/129 (52%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ L Y + + LFC M + +T + VL C+ + GK +HAL
Sbjct: 18 SWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCANTGSLREGKVLHALA 77
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
++ G + + + +L+DMYSK G + ++++ F +I DVV W+A+++ + G +EA
Sbjct: 78 LRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAMITGLDQQGHGQEAA 137
Query: 163 GVFQAMTRE 171
+F M R+
Sbjct: 138 ELFHLMRRK 146
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++ DAL +VF +I + D+ + ++ + + + LF M
Sbjct: 99 CGTVYDAL--------KVFTKIRNPDVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARP 150
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + ++ + + G+ +H + K G +S+ +V L+ MY K + + + F
Sbjct: 151 NQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVF 210
Query: 135 KEIEFKDVVTWNALLSSF 152
+ + D+V+WNALLS F
Sbjct: 211 EAMTNPDLVSWNALLSGF 228
>gi|15238101|ref|NP_199557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170446|sp|Q9FGL1.1|PP423_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g47460
gi|9758774|dbj|BAB09072.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008139|gb|AED95522.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 576
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
KT S+ DA H+VFDE+ D+ S NS + Y +S F LF +H + +
Sbjct: 101 KTSDSLEDA--------HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDV 152
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESV 131
++FT L AC+ L G +H+ ++K G + VV L+DMY K G + ++V
Sbjct: 153 FPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAV 212
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F+ +E KD V+WNA+++S R+G + F M
Sbjct: 213 LVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 4 FIRMTNFPAKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
F +M N T + DA K + + QV ++ + + SS N+ L Y S
Sbjct: 246 FHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEAT 305
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
F MHS+ + Y+ + VL A +AL G +HA K G DS VV +AL+DMY
Sbjct: 306 EFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMY 365
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
SK G+L + F + K+++ WN ++S + R+G + EA +F + +ER
Sbjct: 366 SKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQER 416
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+H + K G S + +LM Y L ++ + F E+ DV++WN+L+S +++
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 156 GLAKEAFGVFQAMTRERV 173
G +E +F + R V
Sbjct: 135 GRFQEGICLFLELHRSDV 152
>gi|414590987|tpg|DAA41558.1| TPA: hypothetical protein ZEAMMB73_311644 [Zea mays]
Length = 575
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + D S +S + +YT+ R L+ M + C+N T VL ACS +
Sbjct: 158 EVFNGMDDRDAFSWSSMMSAYTKGRRSKDALELWREMRAACVNPDCTTMVSVLSACSDMG 217
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G +VH + G + + + TAL+DMY+K G + SV F + KDV+TW++++
Sbjct: 218 ALAVGAEVHQFVESNGVELDVKLGTALIDMYAKCGDIENSVRVFHSMPVKDVLTWSSMII 277
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
HG +A +F M E ++
Sbjct: 278 GLANHGFGHDALSLFSRMLSEGLQ 301
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 98 VHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
+HA +K G ++ V+TAL++ Y+K G + AF E +DV N +L++++ G
Sbjct: 61 LHARALKSGFAAADLFVRTALVEAYAKAGRADLARAAFDEAPRRDVFLCNVMLAAYVTRG 120
Query: 157 LAKEAFGVFQAMTRER 172
EA VF M RER
Sbjct: 121 EVAEARRVFDGM-RER 135
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 81/147 (55%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +H +F ++S D + NS + S++++ LF M + T + L
Sbjct: 494 RLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALS 553
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++LPA GK++H + IKG ++ ++AL+DMY+K G L ++ F+ + K+ V+
Sbjct: 554 ACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVS 613
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN+++S++ HGL KE+ + M E
Sbjct: 614 WNSIISAYGAHGLVKESVSLLHGMQEE 640
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 68/113 (60%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F Y+ C+ A T VL C+++ A G+Q+H +++ + + V++ALMDMY+
Sbjct: 431 MFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYA 490
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K G L S F ++ KD VTWN+++SSF ++G +EA +F+ M E +++
Sbjct: 491 KCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKY 543
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD I D N + ++ + LF M ++ T L C+
Sbjct: 199 FDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADL 258
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G Q+H+L +K G + E V L+ MY+K L ++ F+ + D+VTWN ++S
Sbjct: 259 LSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGC 318
Query: 153 LRHGLAKEAFGVFQAMTR 170
+++GL EAFG+F M R
Sbjct: 319 VQNGLFVEAFGLFYDMQR 336
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+ H + A+T V+ +C+AL A G+ VH G ++ V +AL+ MY+ G
Sbjct: 131 WSHPAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAG 190
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
LLG + +AF I +D V WN ++ ++ G A +F+ M E
Sbjct: 191 LLGNARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCE 239
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 72/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ + DL + N + ++ F + LF M + + T +L A + L
Sbjct: 298 RLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLN 357
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++GK+VH +++ + + + +AL+D+Y K + + + DVV + ++S
Sbjct: 358 GLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMIS 417
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +G+++EA +F+ + + ++
Sbjct: 418 GYVLNGMSEEALQMFRYLLEQCIK 441
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + N+ LF M T + T V+ AC+
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQS 279
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH+ + G S + +LMD+YSK G L + F+ + +KDV++WN L+
Sbjct: 280 GSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLI 339
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 340 GGYTHMNLYKEALLLFQEMLR 360
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 4/146 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + + D+ S N+ + YT + LF M + T +L AC+ L A
Sbjct: 323 LFEGLLYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGA 382
Query: 92 PERGKQVHALM---IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ G+ +H + +K T++ + +T+L+DMY+K G + + + F I K + +WNA+
Sbjct: 383 IDIGRWIHVYIDKRLKSATNASSL-RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAM 441
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F HG A AF +F M + +E
Sbjct: 442 IFGFAMHGRADAAFDIFSRMRKIGIE 467
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I +L N+ + S + + L+ M S L +YTF
Sbjct: 82 DGLP----YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 137
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK---- 135
+L +C+ A + G+Q+H ++K G D + V T+L+ +Y + G L ++ + F
Sbjct: 138 PFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPH 197
Query: 136 ---------------------------EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
EI KDVV+WNA++S + G KEA +F+ M
Sbjct: 198 RDVVSYTALIKGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEM 257
Query: 169 TRERV 173
+ +
Sbjct: 258 MKTNI 262
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 2/124 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVF+ I H LSS N+ +F + A + +F M + TF +L ACS
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGIEPDDITFVGLLSACSRS 483
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ + M + + + M D+ GL E+ E +E + D V W +
Sbjct: 484 GMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINNMEMEPDGVIWCS 543
Query: 148 LLSS 151
LL +
Sbjct: 544 LLKA 547
>gi|222624541|gb|EEE58673.1| hypothetical protein OsJ_10095 [Oryza sativa Japonica Group]
Length = 669
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ L S N+ L YT + LF M + A T VL +C + A
Sbjct: 138 VFDEMRFKGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 197
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK++H ++ + S +++ ALMDMY+ G L E+ + F + +DVV+W +++S+
Sbjct: 198 LSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISA 257
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ RHG +EA +F+ M + +E
Sbjct: 258 YGRHGHGREAIDLFEKMCGQGLE 280
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C+A G+Q+H+ + G D V + + MY++ G ++ + F+E++++DVV+
Sbjct: 21 SCAATDGLVLGRQIHSSTARLGLDGNVFVAHSAISMYARCGRPDDAYQMFEEMQYRDVVS 80
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMT 169
WNA++S F GL A VF+ +
Sbjct: 81 WNAMISGFAHAGLFGRAMDVFRELV 105
>gi|410110045|gb|AFV61102.1| pentatricopeptide repeat-containing protein 81, partial [Nashia
inaguensis]
Length = 405
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTHQ--------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ +F+ I+ DL S N+ L +++ LF +H
Sbjct: 198 ISNALVSMYLKSNSRNVEDAXXIFEHINXKDLVSWNTILTGLSQNGLSENALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 258 DHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 AWESFESSXKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERXIKL 363
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 115 RVFDS-SDGYRDLVTWNSMLAAYLEHNLKECGFNIFLEMVRQRLEMDAYTLSSVISACFE 173
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
G +H +IK G D + AL+ MY K + ++ F+ I KD+V+WN
Sbjct: 174 DTQQSLGXSLHXXVIKKGLDZXTQISNALVSMYLKSNSRNVEDAXXIFEHINXKDLVSWN 233
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 234 TILTGLSQNGLSENALRLFQ 253
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y B LF M + TF P+L
Sbjct: 7 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGBLERCVTLFVGMEMEGVRXDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ +Q+H ++K G + E V A Y++ G + ++ F + ++D+
Sbjct: 67 TLLXDAELYDLXRQLHGKIMKRGLEYENTVLNATXTAYAECGCIEDAKRVFDSSDGYRDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 127 VTWNSMLAAYLEHNLKECGFNIFLEMVRQRLEM 159
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R HQ F IS D NS + S +++ LF M + + L
Sbjct: 401 RLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALS 460
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ LPA GK++HA M++G S+ ++AL+DMYSK G L + F +E K+ V+
Sbjct: 461 ACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVS 520
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN++++++ HG K++ +F M + ++
Sbjct: 521 WNSIIAAYGNHGRLKDSLNLFHGMLGDGIQ 550
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD+ + D+ + + Y + +F ++ + + T VL AC+ L
Sbjct: 306 KIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLA 365
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK++H ++K G V +A+MDMY+K G L + + F I KD V WN++++
Sbjct: 366 ALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMIT 425
Query: 151 SFLRHGLAKEAFGVFQAM 168
S ++G +EA +F+ M
Sbjct: 426 SCSQNGKPEEAIDLFRQM 443
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D N L Y ++ ++ +F M T N + TF VL C++
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263
Query: 92 PERGKQVHALMIKGGTDSE-PVVKT-ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G Q+H L++ G + + PV T AL+D+Y K + + + F + D+V A++
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMI 323
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S ++ +G+ A +F+ + +ER+
Sbjct: 324 SGYVLNGMNNNALEIFRWLLQERMR 348
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L + G+ VH + G + + V ++L+ YS+ G + ++ F
Sbjct: 148 YTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR 207
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ KD V WN +L+ ++++G A GVF M R
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241
>gi|218192417|gb|EEC74844.1| hypothetical protein OsI_10704 [Oryza sativa Indica Group]
Length = 614
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ L S N+ L YT + LF M + A T VL +C + A
Sbjct: 83 VFDEMRFTGLISWNAMLAVYTNNEMHVEAVELFMRMQKDGIEPDAVTLATVLPSCGEVSA 142
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK++H ++ + S +++ ALMDMY+ G L E+ + F + +DVV+W +++S+
Sbjct: 143 LSLGKRIHEVIKRRRMCSSMLLENALMDMYANCGCLKEARDVFDSMGTRDVVSWTSIISA 202
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ RHG +EA +F+ M + +E
Sbjct: 203 YGRHGHGREAIDLFEKMCGQGLE 225
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
MY++ G ++ + F+E++++DVV+WNA++S F GL A VF+ +
Sbjct: 1 MYARCGRPDDAYQMFEEMQYRDVVSWNAMISGFAHAGLFGRAMDVFRELV 50
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D N L Y +S +F FC M ++ + + T+T +L C+
Sbjct: 201 RVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRG 260
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G QVH L+I G + +P V L+ MYSK G L ++ + F + D VTWN L++
Sbjct: 261 KFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIA 320
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++++G EA +F AM V+
Sbjct: 321 GYVQNGFTDEAAPLFNAMISAGVK 344
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
+I D K R ++ F +S D NS + S++++ LF M +
Sbjct: 488 AITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKF 547
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + + L + + LPA GK++H +I+ S+ V +AL+DMYSK G L + F
Sbjct: 548 DSVSLSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVF 607
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ K+ V+WN++++++ HG A+E +F M R V
Sbjct: 608 NLMAGKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVH 647
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
GK++H ++K ++ V +A+ DMY+K G L + E F+ + D + WN+++SSF +
Sbjct: 467 GKELHCDILKKQLENIVNVGSAITDMYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQ 526
Query: 155 HGLAKEAFGVFQAMTRERVEF 175
+G + A +F+ M +F
Sbjct: 527 NGKPEMAVDLFRQMGMSGAKF 547
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L VH G + V +AL+ +Y+ G + ++ F E
Sbjct: 146 YTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDE 205
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D + WN +L +++ G A G F M
Sbjct: 206 LPQRDTILWNVMLHGYVKSGDFNNAMGTFCGM 237
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 67/141 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ + D + N + Y ++ LF M S + + TF L +
Sbjct: 302 KLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESG 361
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ K+VH+ +++ + +K+AL+D+Y K G + + + F++ DV A++S
Sbjct: 362 SLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMIS 421
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ HGL +A F+ + +E
Sbjct: 422 GYVLHGLNIDAINTFRWLIQE 442
>gi|356502497|ref|XP_003520055.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 852
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
Y ++ + F YMH+ + +TF +L ACS++ A G+QVH +++ G
Sbjct: 289 GYAQNGDDHKAIEFFRYMHTEGVESNQFTFPSILTACSSVSAHCFGEQVHGCIVRNGFGC 348
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V++AL+DMY+K G LG + + +E DVV+WN+++ +RHG +EA +F+ M
Sbjct: 349 NAYVQSALVDMYAKCGDLGSAKRVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKM 407
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 18 IADALPKRYVYT------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
+++AL Y T + VF+++ D+ S S + YT++ + + FC M +
Sbjct: 451 VSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVTGYTQNGSHEESLKTFCDMRISG 510
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
++ + +L AC+ L E GKQVH+ IK G S V +L+ MY+K G L ++
Sbjct: 511 VSPDQFIVASILSACAELTLLEFGKQVHSDFIKLGLRSSLSVNNSLVTMYAKCGCLDDAD 570
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + +DV+TW AL+ + R+G +++ FQ M +
Sbjct: 571 AIFVSMHVRDVITWTALIVGYARNGKGRDSLKYFQQMKK 609
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 2/138 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V + + D+ S NS + R LF MH+ + + YTF VL C +
Sbjct: 371 RVLENMEDDDVVSWNSMIVGCVRHGFEEEAILLFKKMHARNMKIDHYTFPSVLNCC--IV 428
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH L+IK G ++ +V AL+DMY+K L + F+++ KDV++W +L++
Sbjct: 429 GRIDGKSVHCLVIKTGFENYKLVSNALVDMYAKTEDLNCAYAVFEKMFEKDVISWTSLVT 488
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++G +E+ F M
Sbjct: 489 GYTQNGSHEESLKTFCDM 506
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ YT +L CSAL ++G+ +H ++K G +S V L+DMY+K + E+ F
Sbjct: 211 SQYTLGSILRGCSALGLIQKGEMIHGYVVKNGFESNVYVVAGLVDMYAKCRHISEAEILF 270
Query: 135 KEIEFK--DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K + F + V W A+++ + ++G +A F+ M E VE
Sbjct: 271 KGLAFNKGNHVLWTAMVTGYAQNGDDHKAIEFFRYMHTEGVE 312
>gi|218186297|gb|EEC68724.1| hypothetical protein OsI_37217 [Oryza sativa Indica Group]
Length = 387
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+ D S NS + YT+ + +F M + T T VLGAC+ +
Sbjct: 99 RIFSEMPERDAVSWNSLISGYTKLGKYTQALGIFQEMQENGIQPTELTLVLVLGACAKIG 158
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G +H + G ++ +V AL+DMY+K G+L + + F + +D+ WNA++
Sbjct: 159 KLDLGTNIHRNLQNKGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIV 218
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F HG ++EA +F +M E
Sbjct: 219 GFSVHGCSREALELFDSMKIE 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++H ++K G + V+ AL+ MY K+G LG++ +AF E+ K+ V+WNAL+ + H
Sbjct: 2 ELHCRVLKLGCGKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGA---HR 58
Query: 157 LAKEAFG---VFQAM 168
A + G V QAM
Sbjct: 59 AAADWMGADRVSQAM 73
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ G + E+ F E+ +D V+WN+L+S + + G +A G+FQ M ++
Sbjct: 90 RIGYMDEAARIFSEMPERDAVSWNSLISGYTKLGKYTQALGIFQEMQENGIQ 141
>gi|255542916|ref|XP_002512521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548482|gb|EEF49973.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 422
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+++ D S +S + Y + N+ +F M + + + VL AC+ L
Sbjct: 247 ELFNDMREKDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKIRPKKFVLSSVLAACANLG 306
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A ++G+ +HA + K + V+ TAL+DMY+K G L + + F+ ++ K+V TWNA++
Sbjct: 307 ALDQGRWIHAYVKKNPMYLDAVLGTALVDMYAKCGRLDMAWDVFETMKEKEVFTWNAMIC 366
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
HG A++A +F M +E+V
Sbjct: 367 GLAMHGRAEDAIKLFLKMQKEKV 389
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 32/130 (24%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGG------------------------------ 106
+T+ +L AC A + G Q+H +IK G
Sbjct: 130 FTYPSLLKACGVATAAKEGVQLHGHVIKQGLTGDVHIRSAGIQMYATLGHMAAARRMLDE 189
Query: 107 -TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+S+ + A++D Y K+G + + E F+++E + V +WN ++S ++G+ KEA +F
Sbjct: 190 DGESDVICFNAMIDGYYKFGDVDSAKELFEKMEDRSVGSWNVMVSGLAKNGMVKEARELF 249
Query: 166 QAMTRERVEF 175
M RE+ E
Sbjct: 250 NDM-REKDEI 258
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+K G++ E+ E F ++ KD ++W++++ +++ G KEA VF M E++
Sbjct: 237 AKNGMVKEARELFNDMREKDEISWSSMIDGYIKGGNYKEALEVFNVMQEEKI 288
>gi|413924724|gb|AFW64656.1| pentatricopeptide repeat protein PPR868-14 isoform 1 [Zea mays]
gi|413924725|gb|AFW64657.1| pentatricopeptide repeat protein PPR868-14 isoform 2 [Zea mays]
gi|413924726|gb|AFW64658.1| pentatricopeptide repeat protein PPR868-14 isoform 3 [Zea mays]
Length = 522
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRN-FPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+E+ D+ + N+ + Y+++ + + M L T TF VLGACS L
Sbjct: 223 IFNEMEGKDVVAYNAMVEGYSKTEETAEGSLEVLKAMQRAGLRPTVSTFVSVLGACSLLS 282
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+PE G+QVH K G + V +AL+DMY+K G + + F ++ ++V+TW +++
Sbjct: 283 SPELGEQVHCQGTKSGLVLDIKVGSALVDMYAKCGRVEDGRRIFNQMAERNVITWTSMID 342
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ ++GL+ EA +F M RER
Sbjct: 343 GYGKNGLSDEALQLFGEM-RER 363
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
++ HA ++ S+ ++ AL+D Y K GLLG + + + VV ALL ++
Sbjct: 155 REAHARALRSVEQSDDILFAALVDAYVKSGLLGYARRVHGAMPVRSVVCSTALLVGCMQE 214
Query: 156 GLAKEAFGVFQAM 168
GL ++A +F M
Sbjct: 215 GLFEDAEAIFNEM 227
>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
Length = 795
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD I ++ S + +Y ++ + L M+ + YTFT VLGAC+A+
Sbjct: 173 NVFDSIQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVG 232
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E K +HA I G D + V TAL+++Y K G L E+ F +I+ KD+V+W++++
Sbjct: 233 ALEEAKILHAATISSTGLDRDAAVGTALINLYGKCGALEEAFGVFVQIDNKDIVSWSSMI 292
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++F + G AK A + M E V
Sbjct: 293 AAFAQSGQAKSAIQLLMLMDLEGV 316
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +I + D+ S +S + ++ +S + L M + TF VL A ++L A
Sbjct: 276 VFVQIDNKDIVSWSSMIAAFAQSGQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKA 335
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK++HA +++ G + + +AL+ MY +G + + F+ +DVV+W+++++
Sbjct: 336 FQYGKEIHARIVQAGYSDDVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAG 395
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ ++ A +F+ M + V+
Sbjct: 396 YSQNESPARALSLFREMEVDGVQ 418
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 69/137 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ D+ S +S + Y+++ + +LF M + + TF + AC+ + A
Sbjct: 377 IFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAIDACAGVGA 436
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
RG Q+H + G D + V TAL+++Y K G L E+ F ++ K+++TW ++ +
Sbjct: 437 LRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLEEAEAVFLGMKKKNLLTWTSIAMA 496
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++G + + M
Sbjct: 497 YGQNGHGSRSLKLLHGM 513
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD + ++ + S + ++T + +F LF M + ++ TFT +L S
Sbjct: 71 DVFDRMKDQNVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITFTSILLKWSGRE 130
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GK+VH+ +++ G + + +V +++MY K G + ++ F I+ +V +W ++
Sbjct: 131 RNLDEGKRVHSHIMQTGYEGDRMVMNLVVEMYGKCGDVEQAGNVFDSIQDPNVFSWTIII 190
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+++ ++G E + M + V+
Sbjct: 191 AAYAQNGHCMEVLRLLSRMNQAGVK 215
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 5/92 (5%)
Query: 82 VLGACSALPAPERGKQVHALMIKGG--TDSEP---VVKTALMDMYSKYGLLGESVEAFKE 136
+L ACS L A GK+VH L+++ D P +++ ++ MY + G +++ F
Sbjct: 16 ILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMYLRCGCTDLALDVFDR 75
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ ++VV W +L+S+F G +A +F+ M
Sbjct: 76 MKDQNVVAWTSLISAFTFAGHFGDAMVLFRKM 107
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++ D I + S N+ L ++ ++ F M L +TF VL C+ L
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E GKQ+H +IK + + + L+DMY+K G + +S+ F+++E +D V+WNA++
Sbjct: 567 ATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMI 626
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ HGL EA +F+ M +E V
Sbjct: 627 CGYALHGLGVEALRMFERMQKENV 650
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
K + + +F + D S N+ + + ++ ++ T F M + +T+ VL
Sbjct: 400 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+AL + E G VH +IK G S+ V + ++DMY K G++ E+ + I + VV
Sbjct: 460 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 519
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+WNA+LS F + ++EA F M
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEM 544
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M L ++ ++ +C+A+ G+Q+HA IK S+ VV TA++D+Y+
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K L ++ AF + V T NA++ +R GL EA G+FQ M R + F
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRF 349
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + R+ LF +M + + + + V AC+ +G+QVH L IK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G D + V A++D+Y K L E+ F+ ++ KD V+WNA++++ ++G +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439
Query: 165 FQAMTR 170
F M R
Sbjct: 440 FNEMLR 445
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 20 DALPKR---------YVYTHQ--------VFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
DA+P+R Y+H +FD + D+ S N+ + Y + F +
Sbjct: 76 DAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVD 135
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M ++ TF +L +CSAL G QVHAL +K G + + +AL+DMY
Sbjct: 136 LFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 195
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
K L +++ F + ++ V+W A ++ +++ +F M R
Sbjct: 196 KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 243
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ YS G + +V F + DVV+WNAL+S + + G+ +E+ +F M R V
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++ D I + S N+ L ++ ++ F M L +TF VL C+ L
Sbjct: 507 QKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANL 566
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E GKQ+H +IK + + + L+DMY+K G + +S+ F+++E +D V+WNA++
Sbjct: 567 ATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMI 626
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ HGL EA +F+ M +E V
Sbjct: 627 CGYALHGLGVEALRMFERMQKENV 650
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
K + + +F + D S N+ + + ++ ++ T F M + +T+ VL
Sbjct: 400 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 459
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+AL + E G VH +IK G S+ V + ++DMY K G++ E+ + I + VV
Sbjct: 460 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 519
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+WNA+LS F + ++EA F M
Sbjct: 520 SWNAILSGFSLNKESEEAQKFFSEM 544
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M L ++ ++ +C+A+ G+Q+HA IK S+ VV TA++D+Y+
Sbjct: 237 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 296
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K L ++ AF + V T NA++ +R GL EA G+FQ M R + F
Sbjct: 297 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRF 349
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + R+ LF +M + + + + V AC+ +G+QVH L IK
Sbjct: 320 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 379
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G D + V A++D+Y K L E+ F+ ++ KD V+WNA++++ ++G +
Sbjct: 380 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 439
Query: 165 FQAMTR 170
F M R
Sbjct: 440 FNEMLR 445
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 20 DALPKR---------YVYTHQ--------VFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
DA+P+R Y+H +FD + D+ S N+ + Y + F +
Sbjct: 76 DAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVD 135
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M ++ TF +L +CSAL G QVHAL +K G + + +AL+DMY
Sbjct: 136 LFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 195
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
K L +++ F + ++ V+W A ++ +++ +F M R
Sbjct: 196 KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 243
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ YS G + +V F + DVV+WNAL+S + + G+ +E+ +F M R V
Sbjct: 89 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 145
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I+ D NS + S +++ LF M + + L AC+ LP
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK++H LMIKG S+ +++L+DMY+K G L S F ++ K+ V+WN+++S
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEVSWNSIIS 536
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ HG KE +F M R ++
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQ 560
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 69/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD I D N L Y ++ + +F M + + + TF VL C++
Sbjct: 115 LFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAM 174
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G Q+H + + G + + V L+ MYSK L + + F + D+V+WN ++S
Sbjct: 175 LDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISG 234
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++++GL EA +F+ M ++
Sbjct: 235 YVQNGLMGEAEHLFRGMISAGIK 257
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T+ TF+ + A + L A GK++H +IK D + V +A++DMY+K G L + F
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
I KD + WN++++S ++G EA +F+ M E +
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
S+ DA K YT Q+ G S+ N + +T F + M ++
Sbjct: 7 SLKDA--KNLFYTLQL------GCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDK 58
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L + + GK VH + G + V ++L+ +Y++ G L ++ F
Sbjct: 59 YTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I KD V WN +L+ ++++G + A +F M ++
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIK 156
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + DL S N + Y ++ LF M S + + TF L + L
Sbjct: 215 KLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELL 274
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + K++H +I+ + +K+AL+D+Y K + + + + D V ++S
Sbjct: 275 SLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMIS 334
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +G KEA F+ + +ER++
Sbjct: 335 GYVLNGKNKEALEAFRWLVQERMK 358
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
++ +VFD + + S NS + +Y + ALF M + TF ++ AC
Sbjct: 515 FSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACG 574
Query: 88 ALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTW 145
+ G + + LM + G + + DM+ + G L E+ E + F D W
Sbjct: 575 HAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVW 634
Query: 146 NALLSSFLRHG 156
LL + HG
Sbjct: 635 GTLLGACHIHG 645
>gi|302803813|ref|XP_002983659.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
gi|300148496|gb|EFJ15155.1| hypothetical protein SELMODRAFT_328 [Selaginella moellendorffii]
Length = 917
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 74/134 (55%), Gaps = 3/134 (2%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
+L S N+ +Y + + LF M L +F VL CS+ G+++H
Sbjct: 569 NLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSS---ASEGRKIH 625
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++++ G +S+ +V TAL++MY+ L E+ F +EF+D+V+WNA+++ HGL++
Sbjct: 626 NILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSR 685
Query: 160 EAFGVFQAMTRERV 173
EA +FQ M E V
Sbjct: 686 EAIQMFQRMQLEGV 699
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 75/138 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+++ D+ S S + +Y + LF M + + T+ + AC+ +
Sbjct: 159 RVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVE 218
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H+ +++ G +S+ VV A+++MY K G L ++ E F+ + + V+WNA+++
Sbjct: 219 SMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVA 278
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +HG EA FQ M
Sbjct: 279 ACTQHGCCVEALWYFQRM 296
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + H S NS L ++ R F + +F M L TF VL CSA+
Sbjct: 59 VFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCSAIGD 118
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
RGK +H +++ G + +V T+L+ MY K G + ++ F ++ +DVV+W +++ +
Sbjct: 119 LSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMT 178
Query: 152 FLRHGLAKEAFGVFQAM 168
+++H EA +F M
Sbjct: 179 YVQHDRCVEALELFHRM 195
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++ D+ S + SY + + M L +T L AC++L A
Sbjct: 461 LFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTA 520
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +HA I+ G + P V AL++MY+K G L E+ F + K++V+WN + ++
Sbjct: 521 LSEGKLIHAHAIERGFAASPAVGNALINMYAKCGCLEEADRVFHQCG-KNLVSWNTIAAA 579
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+++ +EA +FQ M E
Sbjct: 580 YVQRDKWREALQLFQEMQLE 599
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + +TF ++ + + + K + LM++ G + + + +AL++M+S
Sbjct: 394 LFRRMLAEGITPDKFTFISIIDGTARM---QEAKILSELMVESGVELDVFLVSALINMHS 450
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+YG + E+ F +++ +D+V W +++SS+++HG + +A G + M E
Sbjct: 451 RYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLE 499
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 71/160 (44%), Gaps = 9/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRN-FPATWALFCYMHSTCLN 73
C S+ DA +VF+ + H + S N+ + + T+ A W +
Sbjct: 252 CGSLEDA--------REVFERMPHPNTVSWNAIVAACTQHGCCVEALWYFQRMQLQGGIT 303
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
TF +L ACS+ G+ +H +++ G D+ +V +M MYS G + +
Sbjct: 304 PDKVTFITILNACSSPATLTFGELLHECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAF 363
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F + +D ++WN ++S + G EA +F+ M E +
Sbjct: 364 FSTMVERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGI 403
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D+ S N+ + +F M + +F VL A S
Sbjct: 658 RIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSG-S 716
Query: 91 APERGKQ---VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+P KQ V L+ G +++ +V A++ M+ + G L E+ AF+ I +D +WN
Sbjct: 717 SPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNV 776
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++++ +HG ++A +F+ M +E
Sbjct: 777 IVTAHAQHGEVEQALKLFRRMQQE 800
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF +LG C+ A G+ VH+ + + +V+ A + MY K G + ++V F+ +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVSVFQSL 63
Query: 138 EFKDVVTWNALLSSFLRHG 156
+ V+WN+LL++F R G
Sbjct: 64 DHPSQVSWNSLLAAFARDG 82
>gi|410109991|gb|AFV61075.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
macropoda]
Length = 377
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F I+ DL S N+ L +++ LF +H
Sbjct: 184 ISNALVSMYLKSNSRNVEDALKIFXHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 243
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 244 DHLLXDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 303
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F M R++
Sbjct: 304 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMRERRIKL 349
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S+G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 101 RVFDS-SNGYRDLVTWNSMLAAYLEHNLXEYGFNIFLEMVRQRLEMDAYTLSSVISACFE 159
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H L+IK G + AL+ MY K + ++++ F I KD+V+WN
Sbjct: 160 DTQQSLGKSLHGLVIKKGLGEVTQISNALVSMYLKSNSRNVEDALKIFXHINVKDLVSWN 219
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 220 TILTGLSQNGLSENALRLFQ 239
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + + S N+ + Y N +LF M + + TF P+L + +
Sbjct: 1 VFKYMRERNAVSWNALIGGYAEMGNLERCVSLFVGMEMDGVRVDDATFAPLLTLLNDAES 60
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
+ +Q+H ++K G + E V A + Y++ G + ++ F ++D+VTWN++L+
Sbjct: 61 YDLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKRVFDSSNGYRDLVTWNSMLA 120
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++L H L + F +F M R+R+E
Sbjct: 121 AYLEHNLXEYGFNIFLEMVRQRLEM 145
>gi|89257518|gb|ABD65008.1| PPR repeat containing protein [Brassica oleracea]
Length = 583
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 87/171 (50%), Gaps = 2/171 (1%)
Query: 4 FIRMTNFPAKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
F +M N T + DA K + Q+ + + + SS N+ L Y S
Sbjct: 253 FHQMPNPDTVTYNELIDAFVKSEDFNSAFQILSCMPNPNSSSWNTILTGYVNSEQSREAT 312
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
F MHS + L Y+ + VL A +AL G+ +H+ +K G DS VV +AL+DMY
Sbjct: 313 LFFTKMHSYGVRLDEYSLSIVLAAIAALVVVPWGRVIHSCGLKLGLDSRVVVASALIDMY 372
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
SK G+L ++ F + K+++ WNA++ + R+G + EA +F + +ER
Sbjct: 373 SKCGMLKQAELMFWTMPRKNLIAWNAMIYGYARNGDSTEAIKLFSQLKQER 423
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
KT S+ DA H++FDE+ D+ S NS + Y +S LF + + +
Sbjct: 108 KTSDSLEDA--------HRLFDEMPDPDVISWNSLVSGYVQSGRLQEGLCLFLDLERSNV 159
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESV 131
++FT L AC+ L G +H+ ++K G + VV L+DMY K G + ++V
Sbjct: 160 FPNEFSFTAALAACARLKISWLGACIHSKIVKLGMEKGNVVVGNCLIDMYGKCGSMDDAV 219
Query: 132 EAFKEIEFKDVVTWNALLSSFLRH 155
F+ +E KD V+WNA+++S R+
Sbjct: 220 LVFRHMEEKDTVSWNAIVASCSRN 243
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+H ++K G SE + +LM Y L ++ F E+ DV++WN+L+S +++
Sbjct: 82 RQLHGYVVKHGYVSETRLSNSLMRFYKTSDSLEDAHRLFDEMPDPDVISWNSLVSGYVQS 141
Query: 156 GLAKEAFGVFQAMTRERV 173
G +E +F + R V
Sbjct: 142 GRLQEGLCLFLDLERSNV 159
>gi|410110015|gb|AFV61087.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
filifolia]
Length = 362
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 194 ISNALVSMYLKSNSRNXEDALKIFEHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 253
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G++ V +AL+ MYSK G++ +
Sbjct: 254 DHLVTDQYTFASVLRSCSDLATLHLGRQIHVLVVKSGSEGNEYVASALIFMYSKCGIIED 313
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 314 ARESFESSLKETSVTWNSIIFAYAQHGQGKIALXLFYLMTERSIKL 359
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 111 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVKQRLEMDAYTLSSVISACFE 169
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG--ESVEAFKEIEFKDVVTWN 146
GK +H IK G D + AL+ MY K ++++ F+ I KD+V+WN
Sbjct: 170 DTQQSLGKSLHGFXIKKGLDQVTQISNALVSMYLKSNSRNXEDALKIFEHINVKDLVSWN 229
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 230 TILTGLSQNGLSENALRLFQNI 251
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 3 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCITLFVGMEMEGVRVDDATFAPLL 62
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 63 TLLNDAESYDLARQLHGKIMKHGLEYENTVLNATITAYAECGCIEDAKRVFDSSDGYRDL 122
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M ++R+E
Sbjct: 123 VTWNSMLAAYLEHNLEEYGFNIFLEMVKQRLEM 155
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ D I + S N+ L ++ ++ F M L +TF VL C+
Sbjct: 548 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 607
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L E GKQ+H +IK + + + L+DMY+K G + +S+ F+++E +D V+WNA+
Sbjct: 608 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAM 667
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+ + HGL EA +F+ M +E V
Sbjct: 668 ICGYALHGLGVEALRMFERMQKENV 692
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
K + + +F + D S N+ + + ++ ++ T F M + +T+ VL
Sbjct: 442 KALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDFTYGSVL 501
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+AL + E G VH +IK G S+ V + ++DMY K G++ E+ + I + VV
Sbjct: 502 KACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVV 561
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+WNA+LS F + ++EA F M
Sbjct: 562 SWNAILSGFSLNKESEEAQKFFSEM 586
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M L ++ ++ +C+A+ G+Q+HA IK S+ VV TA++D+Y+
Sbjct: 279 LFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYA 338
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K L ++ AF + V T NA++ +R GL EA G+FQ M R + F
Sbjct: 339 KANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRF 391
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + R+ LF +M + + + + V AC+ +G+QVH L IK
Sbjct: 362 NAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIK 421
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G D + V A++D+Y K L E+ F+ ++ KD V+WNA++++ ++G +
Sbjct: 422 SGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILH 481
Query: 165 FQAMTR 170
F M R
Sbjct: 482 FNEMLR 487
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 17/168 (10%)
Query: 20 DALPKR---------YVYTHQ--------VFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
DA+P+R Y+H +FD + D+ S N+ + Y + F +
Sbjct: 118 DAMPRRDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVD 177
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M ++ TF +L +CSAL G QVHAL +K G + + +AL+DMY
Sbjct: 178 LFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYG 237
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
K L +++ F + ++ V+W A ++ +++ +F M R
Sbjct: 238 KCRSLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQR 285
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ YS G + +V F + DVV+WNAL+S + + G+ +E+ +F M R V
Sbjct: 131 MLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGV 187
>gi|255549567|ref|XP_002515835.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544990|gb|EEF46504.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 655
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Query: 28 YTHQVFDEISHG---DLSSLNSQLFSYTRSRNFPATWALFCYMHSTC---LNLTAYTFTP 81
Y Q+FDE+ G DL S NS + Y +S + + LF M + A +
Sbjct: 192 YARQMFDELLMGEVFDLVSWNSMIAVYLQSGDLKSGIELFRRMWKVGEFDIVPDAVSLVN 251
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL AC+++ GKQVH I+ G + V +L+DMY+K GL+ + + F ++ KD
Sbjct: 252 VLPACASMGDWLCGKQVHGFAIRYGLFEDVFVANSLVDMYAKCGLMCIANKVFDRMQHKD 311
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VV+WNA+++ + + G ++A G+F+ M E+++
Sbjct: 312 VVSWNAMVTGYSQIGKFEDALGLFEKMREEKIQL 345
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEA 133
A+T + L AC+ L A G+Q+HA +++ D + + V L+DMYSK G + +
Sbjct: 494 NAFTISCALMACARLAALRFGRQIHAFVLRDQYDCDVLYVANCLIDMYSKSGDMDAARLV 553
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F ++ ++ V+W +L++ + HG +EA VF M RE
Sbjct: 554 FDNMKHRNTVSWTSLMTGYGMHGHGEEAIKVFDEMRRE 591
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 3/97 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V AC LP+ G +HA++ G DS V A++ MY + G + + F E
Sbjct: 140 YTFPFVFKACGELPSFLHGSCIHAIVCSTGFDSNVFVCNAVVAMYGRCGASSYARQMFDE 199
Query: 137 I---EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ E D+V+WN++++ +L+ G K +F+ M +
Sbjct: 200 LLMGEVFDLVSWNSMIAVYLQSGDLKSGIELFRRMWK 236
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 44/186 (23%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV------- 82
++VFD + H D+ S N+ + Y++ F LF M + L +++ V
Sbjct: 301 NKVFDRMQHKDVVSWNAMVTGYSQIGKFEDALGLFEKMREEKIQLDVVSWSAVIAGYAQR 360
Query: 83 ----------------------------LGACSALPAPERGKQVHALMIK-------GGT 107
L C+++ A GK+ H IK
Sbjct: 361 GLGYEALNVFRQMQVCGLRPNEVTLVSLLSGCASVGALLHGKETHCYSIKCVLNFDRSDP 420
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD--VVTWNALLSSFLRHGLAKEAFGVF 165
E +V A++DMY+K + F I KD VVTW A++ + +HG A +A +F
Sbjct: 421 RDELLVVNAIIDMYTKCKDINVGRAIFNSIPPKDRNVVTWTAMIGGYAQHGEANDALELF 480
Query: 166 QAMTRE 171
M ++
Sbjct: 481 SQMLKQ 486
>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
Length = 730
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 53 RSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV 112
RSR F A +F + + + +TF+ +L CSA+ A E+G+Q+HA IK G S+ V
Sbjct: 331 RSRGFQAL-TIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 389
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V +AL++MY+K G + ++ +AF E+ + VTW +++S + +HG +EA +F+ M
Sbjct: 390 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM 445
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + ++ + + + YT + +F M + YT L AC A
Sbjct: 93 RRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLAS 152
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQVH IK G +S + +L +Y+K G L ++ AF I K+V+TW ++
Sbjct: 153 CDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMI 212
Query: 150 SS 151
S+
Sbjct: 213 SA 214
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T V+ C GKQV A K G ++ VK + M +Y + G E++ F++
Sbjct: 242 FTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQ 301
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+E ++TWNA++S + + + A QA +R
Sbjct: 302 MEDASIITWNAMISGYAQ--IMDSAKDDLQARSR 333
>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Brachypodium distachyon]
Length = 802
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + + R + +F M T +T++ + A + + A
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGA 268
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK V ++DMY+K G + ++ + F+ + KD+VTWN++L++
Sbjct: 269 LEQGKWVHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
F ++GL KEA F+ M + +
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGI 350
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V H+VFD++ + D+ S S + Y ++ L M +TF +L A
Sbjct: 103 VEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAV 162
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
A G Q+HAL +K + V +AL+DMY++ G + + F +++ K+ V+WN
Sbjct: 163 GAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AL+S F R G + A VF M R E
Sbjct: 223 ALISGFARKGDGETALMVFAEMQRNGFE 250
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 54/107 (50%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
++ S L T + + AC+ + +++HA + + + +L+ +Y K G
Sbjct: 41 HLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCG 100
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ E+ + F ++ KD+V+W +L++ + ++ + EA G+ M + R
Sbjct: 101 SVVEAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR 147
>gi|224095278|ref|XP_002310370.1| predicted protein [Populus trichocarpa]
gi|222853273|gb|EEE90820.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ H D + N+ + Y S N A W M YTF +L +
Sbjct: 57 KLFDEMPHKDTVTWNTMITGYVESGNLGAAWEFLKSMKRRGFQADGYTFGSILKGVAHAC 116
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+QVH+L++K G + +AL+DMY+K + ++ + F+ + ++ V+WNAL+
Sbjct: 117 RHDLGQQVHSLIVKIGYEQSVYAGSALLDMYAKCERVEDAYDVFQGMPVRNFVSWNALID 176
Query: 151 SFLRHGLAKEAFGVFQAMTRE--RVE 174
F++ G AF + M +E RVE
Sbjct: 177 GFVQVGDRDTAFWLLDCMQKEGVRVE 202
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F + D S NS L +++ LF +M S+ + Y ++ VL +CS L
Sbjct: 363 NLFHSMKSKDRVSWNSILTGFSQMGFSEDALKLFGHMRSSLEEIDDYAYSAVLRSCSDLA 422
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H L +K G DS V ++L+ MYSK G++ ++ + F++ + +TWN+++
Sbjct: 423 ILQLGQQIHLLTVKTGFDSNDFVASSLIFMYSKCGIIEDAWKCFEDTTKESSITWNSIMF 482
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
++ +HG A +F M RER
Sbjct: 483 AYAQHGQGDVALDLFSIM-RER 503
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 31 QVFD-EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL + NS L +Y + LF M YT+T V+ AC A
Sbjct: 259 RVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEMQGFGFEPDIYTYTCVISACFAA 318
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA----FKEIEFKDVVTW 145
GK HAL+IK G + + AL+ MY K L +S+EA F ++ KD V+W
Sbjct: 319 AHKNYGKSFHALVIKRGLEESVTICNALITMYLK--LNNKSMEAALNLFHSMKSKDRVSW 376
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
N++L+ F + G +++A +F M
Sbjct: 377 NSILTGFSQMGFSEDALKLFGHM 399
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 59 ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
A W L C M + + TF P+L + Q+H +IK G + + A +
Sbjct: 187 AFWLLDC-MQKEGVRVEDGTFAPLLTLLDGDKFYKLTMQLHCKIIKHGLEFYNALCNATL 245
Query: 119 DMYSKYGLLGESVEAFK-EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
YS+ GLL ++ F + +D+VTWN++L ++L H ++AF +F M
Sbjct: 246 TAYSECGLLEDAKRVFDGAVGTRDLVTWNSMLVAYLVHDKDEDAFNLFLEM 296
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSK--YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
H K G S V ++ YSK G L + + F E+ KD VTWN +++ ++ G
Sbjct: 22 HCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFDEMPHKDTVTWNTMITGYVESG 81
Query: 157 LAKEAFGVFQAMTR 170
A+ ++M R
Sbjct: 82 NLGAAWEFLKSMKR 95
>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
Length = 770
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 53 RSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV 112
RSR F A +F + + + +TF+ +L CSA+ A E+G+Q+HA IK G S+ V
Sbjct: 371 RSRGFQA-LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V +AL++MY+K G + ++ +AF E+ + VTW +++S + +HG +EA +F+ M
Sbjct: 430 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM 485
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + ++ + + + YT + +F M + YT L AC A
Sbjct: 133 RRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLAS 192
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQVH IK G +S + +L +Y+K G L ++ AF I K+V+TW ++
Sbjct: 193 CDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMI 252
Query: 150 SS 151
S+
Sbjct: 253 SA 254
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T V+ C GKQV A K G ++ VK + M +Y + G E++ F++
Sbjct: 282 FTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQ 341
Query: 137 IEFKDVVTWNALLSSF 152
+E ++TWNA++S +
Sbjct: 342 MEDASIITWNAMISGY 357
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 41/90 (45%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ P+L C + + VH M K G ++ V T+L++ Y + ++ F +
Sbjct: 81 YVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATSLVNAYMRCSAARDARRLFDGMP 140
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++VVTW AL++ + + VF M
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEM 170
>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 755
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 71/107 (66%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
A+F ++ + + +TF+ VL CS L A E+G+Q+H +IK G ++ VV TAL+ MY
Sbjct: 364 AMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMY 423
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+K G + ++ +AF E+ + +++W ++++ F RHGL+++A +F+ M
Sbjct: 424 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 470
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 75/139 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VFD + ++++ + L Y ++ + LF M + YT VL ACS+L
Sbjct: 119 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 178
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E GKQVHA +IK D + + +L YSK+ L +++AFK I+ KDV++W +++
Sbjct: 179 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 238
Query: 150 SSFLRHGLAKEAFGVFQAM 168
SS +G A + F M
Sbjct: 239 SSCCDNGQAARSLSFFMDM 257
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R + + F I D+ S S + S + + + F M S + YT T VL
Sbjct: 214 RRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVL 273
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC + + G Q+H+L IK G S ++K ++M +Y K G L E+ + F+ +E ++V
Sbjct: 274 SACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLV 333
Query: 144 TWNALLSSFLR-----------HGLAKEAFGVFQAMTR 170
TWNA+++ + H A +FQ + R
Sbjct: 334 TWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR 371
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++Y F P+L C + +H ++K G + V T L+++YSK G++ + + F
Sbjct: 64 SSYYF-PLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 122
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++V W LL+ ++++ A +F M
Sbjct: 123 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKM 156
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +H +F ++S D + NS + S+ ++ LF M + T + +L
Sbjct: 500 RLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILS 559
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ LPA GK++H ++IKG ++ ++AL+DMY K G L ++ F+ + K+ V+
Sbjct: 560 ACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVS 619
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN+++S++ HGL KE+ + M E
Sbjct: 620 WNSIISAYGAHGLVKESVDLLCCMQEE 646
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
VFD D+ ++ + Y +R A +F Y+ + + A L AC++
Sbjct: 403 AQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACAS 462
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A G+++H ++K + V++ALMDMYSK G L S F ++ KD VTWN++
Sbjct: 463 MAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSM 522
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
+SSF ++G +EA +F+ M E V++
Sbjct: 523 ISSFAQNGEPEEALDLFRQMIMEGVKY 549
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D N + Y ++ + + LF M ++ + T L C+A
Sbjct: 203 EVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEA 262
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H L +K G + E V L+ MY+K L E+ F + D+VTWN ++S
Sbjct: 263 DLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMIS 322
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++GL +A +F M + ++
Sbjct: 323 GCVQNGLVDDALRLFCDMQKSGLQ 346
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+ H + +T V+ +C+AL A G+ VH G D + V +AL+ MY+ G
Sbjct: 137 WAHPSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAG 196
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
LL + E F ++ +D V WN ++ +++ G A G+F+ M
Sbjct: 197 LLDGAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVM 239
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 28/136 (20%), Positives = 65/136 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + DL + N + ++ LFC M + L + T +L A + L
Sbjct: 304 RLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELN 363
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++GK++H +++ + + +AL+D+Y K + + F + DVV + ++S
Sbjct: 364 GFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMIS 423
Query: 151 SFLRHGLAKEAFGVFQ 166
++ + +++ A +F+
Sbjct: 424 GYVLNRMSEAAVKMFR 439
>gi|410110055|gb|AFV61107.1| pentatricopeptide repeat-containing protein 81, partial [Verbena
officinalis]
Length = 378
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F I DL S N+ L +++ LF ++H
Sbjct: 184 ISNALISMYLKSNSPNVEDALKIFVHIEVRDLVSWNTILTGLSQNGLSENALRLFQHIHL 243
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L + G+Q+H L++K G + V +A + MYSK G++ +
Sbjct: 244 DHLVIDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASAFIFMYSKCGIIED 303
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ VTWN+++ ++ +HG K A +F MT ++
Sbjct: 304 ARESFESSHKNSSVTWNSIIFAYAQHGQGKIALDLFYLMTERNIKL 349
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + + S N+ + Y + N LF M + + TF P+L +
Sbjct: 1 VFKYMLQRNTVSWNALIGGYAETENLQRCIELFMCMEMEGVRVDDATFAPLLTLLYDAES 60
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
E +Q H ++K G + E V A + Y++ G + ++ F + ++D+VTWN++L+
Sbjct: 61 YELTRQFHGKIMKLGLEHENTVLNATITAYAECGCIQDAKNVFDSADGYRDLVTWNSILA 120
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++L H L + F + M R+R+E
Sbjct: 121 AYLEHNLEEFGFNIVLEMVRQRLE 144
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 3/139 (2%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFD + DL + NS L +Y + + M L + AYT + ++ AC
Sbjct: 101 NVFDSADGYRDLVTWNSILAAYLEHNLEEFGFNIVLEMVRQRLEMDAYTLSSIISACFGD 160
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNA 147
GK + L+IK G + + AL+ MY K + ++++ F IE +D+V+WN
Sbjct: 161 SQQSLGKSLQGLVIKKGLEHVTQISNALISMYLKSNSPNVEDALKIFVHIEVRDLVSWNT 220
Query: 148 LLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 221 ILTGLSQNGLSENALRLFQ 239
>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
Length = 770
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 53 RSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV 112
RSR F A +F + + + +TF+ +L CSA+ A E+G+Q+HA IK G S+ V
Sbjct: 371 RSRGFQA-LTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGFLSDVV 429
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V +AL++MY+K G + ++ +AF E+ + VTW +++S + +HG +EA +F+ M
Sbjct: 430 VNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEEM 485
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + ++ + + + YT + +F M + YT L AC A
Sbjct: 133 RRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLAS 192
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQVH IK G +S + +L +Y+K G L ++ AF I K+V+TW ++
Sbjct: 193 CDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGSLDSALRAFWRIPEKNVITWTTMI 252
Query: 150 SS 151
S+
Sbjct: 253 SA 254
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T V+ C GKQV A K G ++ VK + M +Y + G E++ F++
Sbjct: 282 FTLTSVMSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQ 341
Query: 137 IEFKDVVTWNALLSSF 152
+E ++TWNA++S +
Sbjct: 342 MEDASIITWNAMISGY 357
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ P+L C + + + VH M K G ++ V T+L++ Y + G ++ F +
Sbjct: 81 YVPLLHRCVEMGSLGAARAVHGHMAKTGAGADMFVATSLVNAYMRCGAARDARRLFDGMP 140
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++VVTW AL++ + + VF M
Sbjct: 141 ERNVVTWTALVTGYTLNSQPALGLEVFVEM 170
>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 6 RMTNFPAKTCISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLF-SYTRSRNFP 58
RM F + AL Y +Y +VFD+ +H LN+ + +Y + ++F
Sbjct: 262 RMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDD-THAQNIFLNTTIMDAYFQDKSFE 320
Query: 59 ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
LF M + + YTF +L + + L ++G +H L++K G + +V AL+
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALV 380
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+MY+K G + ++ +AF + F+D+VTWN ++S HGL +EA F M
Sbjct: 381 NMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ T V +CS E GKQ H +K G S V+ L+ MYS GE++ +
Sbjct: 137 FVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + D+ +++ LS +L G KE V + E
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANE 231
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V D++ + DLS +S L Y F + + T+ L S L
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLR 251
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
QVH+ M++ G ++E AL++MY K G + + F + +++ ++
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMD 311
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ + +EA +F M + V
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEV 334
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 86/165 (52%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ +A AL + Y+ +VFD++ D+ S + Y + N + LF M
Sbjct: 298 VRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQE 357
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ T+ ++ AC++ +++H+ +++ G ++ +V TAL+ MY+K G + +
Sbjct: 358 EGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKCGAIKD 417
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F + +DVV+W+A++ +++ +G +EAF F M R VE
Sbjct: 418 ARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVE 462
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + D+S+ N + Y +S + + LF M +F +L CS
Sbjct: 218 QVFDGLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPE 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK VHA + G + V TAL+ MY G + + F +++ +DVV+W ++
Sbjct: 278 ALAWGKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIR 337
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + ++AFG+F M E ++
Sbjct: 338 GYAENSNIEDAFGLFATMQEEGIQ 361
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +I DA QVFD +S D+ S ++ + +Y + + F M +
Sbjct: 412 CGAIKDA--------RQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEP 463
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T+ +L AC L A + G +++ IK S V AL++M K+G + + F
Sbjct: 464 DVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIF 523
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ + +DVVTWN ++ + HG A+EA +F M +ER
Sbjct: 524 ENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKER 561
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q FD + + + + N+ + Y + + +ALF M + + TF VL ACS+
Sbjct: 117 QTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPA 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK+ HA +IK G S+ + TAL+ MY K G + + + F + +DV T+N ++
Sbjct: 177 GLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIG 236
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ + G ++AF +F M +E
Sbjct: 237 GYAKSGDGEKAFQLFYRMQQE 257
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
++ + T+ + C L GKQV +I+ G L+ ++S G + E+ +
Sbjct: 58 HIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQ 117
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F +E K VVTWNA+++ + + G KEAF +F+ M E +E
Sbjct: 118 TFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAME 159
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 1/143 (0%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGA 85
+Y VFDEI D N+ + +Y S+N + +LF M H C+ + +Y+ + V+ A
Sbjct: 55 LYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQA 114
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C L P G+++H ++K G S+ V+TAL++MY+K+G + + E+ D+V +
Sbjct: 115 CGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPY 174
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
N LL+ ++R G A +F M
Sbjct: 175 NVLLAEYVRVGEINLAHDLFDRM 197
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD DL S +S + +Y ++R LF M + T VL AC +
Sbjct: 223 KLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSACGDVG 282
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK +H + + + + + T+L+DMY+K G + S+ F + +DV W+A++
Sbjct: 283 ALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWSAMIM 342
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
HG + A F M E ++
Sbjct: 343 GLANHGFGELALDHFSKMISEDIK 366
>gi|410110053|gb|AFV61106.1| pentatricopeptide repeat-containing protein 81, partial
[Rhaphithamnus venustus]
Length = 376
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I DL S N+ L +++ LF MH L + YTF VL +CS L
Sbjct: 202 KVFEHIDVKDLVSWNTILTGMSQNGLSENALRLFRQMHLGHLVIDQYTFAAVLRSCSDLA 261
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+++H L++K G + V +AL+ MYSK G++ ++ E+F+ VTWN+L+
Sbjct: 262 TLQLGREIHVLVVKSGFEGNEYVASALIFMYSKCGIIEDARESFEASHKDSSVTWNSLIF 321
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ +HG K A +F M V+
Sbjct: 322 AYAQHGQGKVALYLFCLMAERHVKL 346
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 98 RVFDSADGYRDLVTWNSMLAAYLEHDLEECGFDIFLEMVRLRLEMDAYTLSSIISACFGD 157
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNA 147
GK +H+L+IK G + V AL+ MY K + ++++ F+ I+ KD+V+WN
Sbjct: 158 SRQCLGKSLHSLVIKRGLEQVTQVSNALISMYLKSNSQNVEDALKVFEHIDVKDLVSWNT 217
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +F+ M
Sbjct: 218 ILTGMSQNGLSENALRLFRQM 238
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N LF M + + TF P+L E +Q+H +
Sbjct: 9 SWNALIGGYAEMGNLQRCIELFVDMEMEGVRVDDATFAPLLALLYDAELYELTRQLHGKI 68
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K E V A + Y++ G + ++ F + ++D+VTWN++L+++L H L +
Sbjct: 69 MKCSLQHENTVFNATITAYAECGCIQDAKRVFDSADGYRDLVTWNSMLAAYLEHDLEECG 128
Query: 162 FGVFQAMTRERVEF 175
F +F M R R+E
Sbjct: 129 FDIFLEMVRLRLEM 142
>gi|410109997|gb|AFV61078.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
montevidensis]
Length = 402
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 89/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +
Sbjct: 195 ISNALVSMYLKSNSRNVEDALKIFERINVKDLVSWNTILTGLSQNGLSENALRLFQNIXL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT R++
Sbjct: 315 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERRIKL 360
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEMDAYTLSSVISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK HAL+IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSXHALVIKKGLDEVTQISNALVSMYLKSNSRNVEDALKIFERINVKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 231 TILTGLSQNGLSENALRLFQNI 252
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVTLFVGMEMDGVRVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 64 TLLXDAESYDLXRQLHGKIMKXGLEYENTVLNATITAYAECGCIXDAKRVFDSSDGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 124 VTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEM 156
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 32 VFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTA--YTFTPV 82
+FDEI+ D+ S NS + ++ +S N LF M H N + + +
Sbjct: 174 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 233
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC +L A + K+VH I+ GT + V AL+D Y+K GL+ +V+ F +EFKDV
Sbjct: 234 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 293
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WNA+++ + + G K AF +F+ M +E +
Sbjct: 294 VSWNAMVAGYSQSGNFKAAFELFKNMRKENI 324
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 47/188 (25%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV-------- 82
+VF+ + D+ S N+ + Y++S NF A + LF M + L T+T V
Sbjct: 283 KVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRG 342
Query: 83 ---------------------------LGACSALPAPERGKQVHALMIK----------G 105
L AC++L A +G ++HA +K G
Sbjct: 343 CSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFG 402
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSFLRHGLAKEAFG 163
G D + +V AL+DMYSK + F +I E ++VVTW ++ ++G + +A
Sbjct: 403 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 462
Query: 164 VFQAMTRE 171
+F M E
Sbjct: 463 LFVEMISE 470
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
C M L +T VL AC LP+ G H L+ G +S + AL+ MYS+
Sbjct: 106 CRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRC 165
Query: 125 GLLGESVEAFKEIE---FKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
G L E+ F EI DV++WN+++S+ ++ A A +F MT
Sbjct: 166 GSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 213
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVE 132
AYT + +L AC+ L A GKQ+HA +++ S V L++MYSK G + +
Sbjct: 477 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARH 536
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + K ++W ++++ + HG EA +F M +
Sbjct: 537 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK 574
>gi|302788230|ref|XP_002975884.1| hypothetical protein SELMODRAFT_416001 [Selaginella moellendorffii]
gi|300156160|gb|EFJ22789.1| hypothetical protein SELMODRAFT_416001 [Selaginella moellendorffii]
Length = 210
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R T ++F+E+ D+ + N L +Y LF M + + T+T +LG
Sbjct: 21 RLADTCKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTEPNSITWTTMLG 80
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ + G++VH L+ + G DSE V AL+DM+ K LG + +AF+ I KD +
Sbjct: 81 ACAGEASLAEGRRVHELIAERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDASS 140
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN L+++ ++G A+EA F M +E ++
Sbjct: 141 WNVLVAALAQNGDAEEALKQFLRMQQEGIK 170
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L+ Y G L ++ + F+E+E +DV+TWN +L +++ +AKEA +F+ M E E
Sbjct: 10 NGLLGAYIHVGRLADTCKLFEEMEERDVITWNMILGAYVERDMAKEAVRLFRRMIAEGTE 69
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 73/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + N+ LF M T + T V+ AC+
Sbjct: 177 QKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 236
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH+ + G S + AL+D+YSK G L + F+ + +KDV++WN L+
Sbjct: 237 GSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLI 296
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 297 GGYTHMNLYKEALLLFQEMLR 317
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + + D+ S N+ + YT + LF M + T +L AC+ L A
Sbjct: 280 LFEGLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 339
Query: 92 PERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H + K G + ++T+L+DMY+K G + + + F I K + +WNA++
Sbjct: 340 IDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 399
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F HG A +F +F M + +E
Sbjct: 400 FGFAMHGRADASFDIFSRMRKNGIE 424
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I +L N+ + S + + L+ M S L +YTF
Sbjct: 39 DGLP----YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTF 94
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE--- 136
+L +C+ A + G+Q+H ++K G D + V T+L+ MY + G L ++ + F E
Sbjct: 95 PFLLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPH 154
Query: 137 ----------------------------IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
I KDVV+WNA++S + G KEA +F+ M
Sbjct: 155 RDVVSYTALIKGYASRGYIENAQKMFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 214
Query: 169 TRERV 173
+ V
Sbjct: 215 MKTNV 219
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVF+ I H LSS N+ +F + A++ +F M + TF +L ACS
Sbjct: 381 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRKNGIEPDDITFVGLLSACSHS 440
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ + M + + + M D+ GL E+ E +E + D V W +
Sbjct: 441 GMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCS 500
Query: 148 LLSSFLRHG 156
LL + HG
Sbjct: 501 LLKACKMHG 509
>gi|302763107|ref|XP_002964975.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
gi|300167208|gb|EFJ33813.1| hypothetical protein SELMODRAFT_30550 [Selaginella moellendorffii]
Length = 703
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA+ QVF + L S N + ++ ++R+ +F M S +
Sbjct: 34 CGSVDDAI--------QVFHSLPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKP 85
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T + VLGACS+L E GK++H+ + G S +V+ AL+ MY++ L + F
Sbjct: 86 DSATLSSVLGACSSLRDLEEGKKIHSRALARGLSSSIIVQNALVSMYARCSRLDVARVVF 145
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+IE K VV+WNA++++ R G A++A +F+ M E
Sbjct: 146 DKIESKSVVSWNAMIAACARQGEAEQALQLFKRMELE 182
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD+I + S N+ + + R LF M L TF V ACS LP
Sbjct: 144 VFDKIESKSVVSWNAMIAACARQGEAEQALQLFKRME---LEPNEVTFASVFNACSLLPD 200
Query: 92 -PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK++H + ++ V TA++ MY K+G +G + + F I+ K+VV+WNA+L
Sbjct: 201 HREVGKRIHDRIRGSHLEANVTVATAIVTMYGKFGKVGMARQVFNGIQHKNVVSWNAMLG 260
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ ++ L +EA V+ M ++V+
Sbjct: 261 AYTQNNLDREALEVYHEMVAQKVQ 284
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ I H ++ S N+ L +YT++ ++ M + + T LG ++L
Sbjct: 242 QVFNGIQHKNVVSWNAMLGAYTQNNLDREALEVYHEMVAQKVQRDEVTVVIALGISASLR 301
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G ++H L + G DS V+ AL+ MY K L + F ++ DVV+W AL+
Sbjct: 302 LLKLGIELHELSVAHGYDSNIKVQNALISMYGKCNELDAARRVFSKVRAHDVVSWTALIV 361
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +HG +EA +++ M E +E
Sbjct: 362 AYTQHGRNREALELYKQMEGEGME 385
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 2/142 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ D+ S + + +YT+ L+ M + TFT VL ACS
Sbjct: 343 RVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTS 402
Query: 91 APERGKQVHA-LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNAL 148
E G+ +HA L+ + S+ V+ AL++MY K G L S E F+ + K VV WNA+
Sbjct: 403 DLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAM 462
Query: 149 LSSFLRHGLAKEAFGVFQAMTR 170
++++ + G ++ A ++ M +
Sbjct: 463 ITAYEQEGYSRAAVDLYDMMKQ 484
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + +Y + A L+ M L+ T + +L AC+ L E+G+Q+H +I
Sbjct: 460 NAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELQDLEKGEQLHVEIIA 519
Query: 105 GGTDSE-PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
S+ PVV AL+ MY+ G + E+ FK ++ +DVV+W L+S++++ G
Sbjct: 520 SRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGG 572
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
ALP +G+++HA ++ G S+ + L+ MY K G + ++++ F + + + +WN
Sbjct: 1 ALP---QGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHSLPRRSLFSWNF 57
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++++F ++ ++A +F++M
Sbjct: 58 IIAAFAKNRHGRKAIEMFRSM 78
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 32 VFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTA--YTFTPV 82
+FDEI+ D+ S NS + ++ +S N LF M H N + + +
Sbjct: 67 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 126
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC +L A + K+VH I+ GT + V AL+D Y+K GL+ +V+ F +EFKDV
Sbjct: 127 LPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 186
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WNA+++ + + G K AF +F+ M +E +
Sbjct: 187 VSWNAMVAGYSQSGNFKAAFELFKNMRKENI 217
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 47/188 (25%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV-------- 82
+VF+ + D+ S N+ + Y++S NF A + LF M + L T+T V
Sbjct: 176 KVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRG 235
Query: 83 ---------------------------LGACSALPAPERGKQVHALMIK----------G 105
L AC++L A +G ++HA +K G
Sbjct: 236 CSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFG 295
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSFLRHGLAKEAFG 163
G D + +V AL+DMYSK + F +I E ++VVTW ++ ++G + +A
Sbjct: 296 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 355
Query: 164 VFQAMTRE 171
+F M E
Sbjct: 356 LFVEMISE 363
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVE 132
AYT + +L AC+ L A GKQ+HA +++ S V L++MYSK G + +
Sbjct: 370 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARH 429
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + K ++W ++++ + HG EA +F M +
Sbjct: 430 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK 467
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L +T VL AC LP+ G H L+ G +S + AL+ MYS+ G L E+
Sbjct: 8 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 67
Query: 134 FKEIE---FKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F EI DV++WN+++S+ ++ A A +F MT
Sbjct: 68 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 106
>gi|302768341|ref|XP_002967590.1| hypothetical protein SELMODRAFT_88697 [Selaginella moellendorffii]
gi|300164328|gb|EFJ30937.1| hypothetical protein SELMODRAFT_88697 [Selaginella moellendorffii]
Length = 620
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 8/161 (4%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ADA VF+ I DL++ N+ + +Y+R+ + M +
Sbjct: 115 CGSVADA--------RAVFEGICGRDLAAWNAMVAAYSRNGQMAQAVLVLRRMAVEGVRP 166
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF +L C + A + + +HA ++ G +S P V T L+ MY + G LG +V AF
Sbjct: 167 GEGTFVGMLSWCCTVGALDEARSIHAHILATGLESRPTVGTTLVSMYGRCGSLGGAVRAF 226
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ I KD+V WNA+++++ + G +++ ++ M E V
Sbjct: 227 QRIRDKDIVAWNAMIAAYAQSGHSRDTIRIYHVMDLEGVRV 267
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 75/138 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F I D+ + N+ + +Y +S + T ++ M + + T VL AC++L
Sbjct: 224 RAFQRIRDKDIVAWNAMIAAYAQSGHSRDTIRIYHVMDLEGVRVDKVTLIGVLDACASLA 283
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + VHA ++ G + + V+ TAL++ Y++ G L ++ F E+E ++V TW+A+++
Sbjct: 284 LTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLVDADLVFAEMEERNVATWSAMVA 343
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ + G + +++ M
Sbjct: 344 AYAQTGHPDRSLEMYREM 361
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS--------EPVV 113
AL+ M + A T VLGAC+ L + G+++H + G + V+
Sbjct: 45 ALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREIHRSHVLGARSRPYERPMPVDAVM 104
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
TAL+ MY + G + ++ F+ I +D+ WNA+++++ R+G +A V + M E V
Sbjct: 105 ATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVAAYSRNGQMAQAVLVLRRMAVEGV 164
>gi|302800503|ref|XP_002982009.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
gi|300150451|gb|EFJ17102.1| hypothetical protein SELMODRAFT_115259 [Selaginella moellendorffii]
Length = 604
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFDE++ D+ S ++ + +Y ++ + +F M + + TF V+ AC +
Sbjct: 190 QVFDELAIKDVVSWSNMIAAYAQTGHGTEALEMFHRMDAEGIQANVITFVAVVHACVLVA 249
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +H +I+ G +S V+ TAL++MY K G L E+ + F ++ +DVV W+A+L
Sbjct: 250 RITDARTIHRRIIEAGLESNTVLGTALLNMYGKCGGLPEAKKIFDKLTERDVVVWSAILE 309
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ RHG + A +F M +E V
Sbjct: 310 AYARHGHPRVALKLFTLMQQEGV 332
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F E+ ++ S N+ + +Y ++ +F M + + TFT VL A +
Sbjct: 89 RAFSEMKRRNIVSWNAVISAYAQNDRSSDAIVIFLRMLLDGIQPSYVTFTSVLNAFAGPE 148
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K VH L ++ G S PVV TAL++MYSK G + + + F E+ KDVV+W+ +++
Sbjct: 149 LHRWAKLVHDLALEVGFGSHPVVATALLNMYSKVGSIDRARQVFDELAIKDVVSWSNMIA 208
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ + G EA +F M E ++
Sbjct: 209 AYAQTGHGTEALEMFHRMDAEGIQ 232
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 49/90 (54%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L AC G+++HA ++ G + ++ MY K G + + AF E++
Sbjct: 36 YLDLLLACGRSRNLGNGRRLHARIVATGHQDVMFLANHILIMYGKCGGMEDLSRAFSEMK 95
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++V+WNA++S++ ++ + +A +F M
Sbjct: 96 RRNIVSWNAVISAYAQNDRSSDAIVIFLRM 125
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA+ QVF+ + + +S + Y +++N+ L+ L
Sbjct: 202 CGMIKDAV--------QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQ 253
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + V+ ACS L A GKQ+HA++ K G S V ++ +DMY+K G L ES F
Sbjct: 254 NQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIF 313
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E++ K++ WN ++S F +H KE +F+ M ++
Sbjct: 314 SEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD 350
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + L S N+ + YTR+R +F M + + +T + VL AC
Sbjct: 109 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 168
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K++H L +K D V TAL+D+Y+K G++ ++V+ F+ ++ K VTW+++++
Sbjct: 169 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 228
Query: 151 SFLRHGLAKEAFGVF---QAMTRERVEF 175
++++ +EA ++ Q M+ E+ +F
Sbjct: 229 GYVQNKNYEEALLLYRRAQRMSLEQNQF 256
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L C+ A K H +I+ + + + L++ YSK G + + + F + +
Sbjct: 59 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 118
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+V+WN ++ + R+ + EA +F M E +F
Sbjct: 119 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 152
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ +L N+ + + + LF M ++ TF+ +L C
Sbjct: 312 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 371
Query: 92 PERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT-WNALL 149
E G++ LM G V + ++D+ + GLL E+ E K I F + W +LL
Sbjct: 372 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 431
Query: 150 SS 151
+S
Sbjct: 432 AS 433
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + + +S + Y +++N+ L+ L +T + V+ ACS L
Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQ+HA++ K G S V ++ +DMY+K G L ES F E++ K++ WN ++S
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIIS 337
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F +H KE +F+ M ++
Sbjct: 338 GFAKHARPKEVMILFEKMQQD 358
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + L S N+ + YTR+R +F M + + +T + VL AC
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K++H L +K D V TAL+D+Y+K G++ ++V+ F+ ++ K VTW+++++
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 151 SFLRHGLAKEAFGVF---QAMTRERVEF 175
++++ +EA ++ Q M+ E+ +F
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQF 264
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L C+ A K H +I+ + + + L++ YSK G + + + F + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+V+WN ++ + R+ + EA +F M E +F
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 160
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ +L N+ + + + LF M ++ TF+ +L C
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 92 PERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT-WNALL 149
E G++ LM G V + ++D+ + GLL E+ E K I F + W +LL
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 150 SS 151
+S
Sbjct: 440 AS 441
>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 749
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 71/107 (66%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
A+F ++ + + +TF+ VL CS L A E+G+Q+H +IK G ++ VV TAL+ MY
Sbjct: 358 AMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMY 417
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+K G + ++ +AF E+ + +++W ++++ F RHGL+++A +F+ M
Sbjct: 418 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDM 464
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VFD + ++++ + L Y ++ + LF M + YT VL ACS+L
Sbjct: 113 HKVFDNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSL 172
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E GKQVHA +IK D + + +L YSK+ L +++AFK I+ KDV++W +++
Sbjct: 173 QSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRRLEFAIKAFKIIKEKDVISWTSVI 232
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
SS +G A + F M +
Sbjct: 233 SSCCDNGQAARSLSFFMDMLSD 254
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 11/158 (6%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R + + F I D+ S S + S + + + F M S + YT T VL
Sbjct: 208 RRLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVL 267
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC + + G Q+H+L IK G S ++K ++M +Y K G L E+ + F+ +E ++V
Sbjct: 268 SACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMYLYLKCGWLIEAQKLFEGMETLNLV 327
Query: 144 TWNALLSSFLR-----------HGLAKEAFGVFQAMTR 170
TWNA+++ + H A +FQ + R
Sbjct: 328 TWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYR 365
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++Y F P+L C + +H ++K G + V T L+++YSK G++ + + F
Sbjct: 58 SSYYF-PLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVF 116
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++V W LL+ ++++ A +F M
Sbjct: 117 DNLPRRNVNAWTTLLTGYVQNSHPLLALQLFIKM 150
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR ++F+ + H L S N+ + Y ++ FC M + ++T V+
Sbjct: 426 KRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVI 485
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
A + L + K +H L+I+ D V TAL+DMY+K G + + + F ++ + V
Sbjct: 486 PALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERHVT 545
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TWNA++ + HGL K A +F+ M +E ++
Sbjct: 546 TWNAMIDGYGTHGLGKAALELFEKMKKEVIK 576
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+++FD + DL N+ + Y ++ L M + T +L A + +
Sbjct: 230 YKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADV 289
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H ++ G +S V TAL+DMYSK G +G + F + K VV+WN+++
Sbjct: 290 GSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMI 349
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
++++G A +FQ M E+VE
Sbjct: 350 DGYVQNGDPGAAMEIFQKMMDEQVEM 375
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD ++ + S NS + Y ++ + A +F M + +T T L AC+ L
Sbjct: 333 IFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGD 392
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G+ VH L+ + S+ V +L+ MYSK + + E F+ ++ K +V+WNA++
Sbjct: 393 VEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILG 452
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ ++G EA F M + ++
Sbjct: 453 YAQNGRINEAIDYFCKMQLQNIK 475
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 7/139 (5%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
DE+ H + L Y R+ + + FC M + Y FT +L C
Sbjct: 139 IDELYH-------TMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADL 191
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+GK++H +I G S T +++MY+K L+ E+ + F + +D+V WN ++S +
Sbjct: 192 RKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGY 251
Query: 153 LRHGLAKEAFGVFQAMTRE 171
++G K A + M E
Sbjct: 252 AQNGFGKTALELVLRMQEE 270
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 3/81 (3%)
Query: 96 KQVHA---LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
K++H L+IK G SE + +T L+ ++ K+G L E+ F+ IE K ++ +L +
Sbjct: 91 KELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGY 150
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
R+ +A F M + V
Sbjct: 151 ARNSSLDDAVSFFCRMRYDGV 171
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+ + + + N+ + Y +S + +L+ M + + T++ VL AC++L
Sbjct: 299 KLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACASLA 358
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G Q+H+L +K D + VV AL+DMY+K G + + F + +D ++WNA++S
Sbjct: 359 AMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAMIS 418
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HGL EA FQ M
Sbjct: 419 GYSMHGLVGEALKAFQMM 436
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + + Y +S LF M + +TF VL +C+++
Sbjct: 198 RVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVLQSCASIE 257
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQVH ++K G D V ALMD+Y+K G L S++ F E+ ++ VTWN ++
Sbjct: 258 NLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDNSMKLFMELPNRNEVTWNTMIV 317
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++ G +A +++ M +V+
Sbjct: 318 GYVQSGDGDKALSLYKNMLECQVQ 341
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q FD I+ D+ S + Y + F + LF M N +TF VL AC L
Sbjct: 97 QAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLE 156
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK VH ++K + + V L+D+Y+K+G + + F+E+ DV+ W+ ++S
Sbjct: 157 AFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMIS 216
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ + ++EA +F M R
Sbjct: 217 RYAQSNQSREAVELFGQMRR 236
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 56/118 (47%)
Query: 51 YTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE 110
Y +S LF +H L + FT +L ++ E +HA + K G +S
Sbjct: 16 YVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKLGHESN 75
Query: 111 PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V TAL+D Y+ G + + +AF I KD+V+W +++ + + +++ +F M
Sbjct: 76 AFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLFAEM 133
>gi|255539647|ref|XP_002510888.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550003|gb|EEF51490.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 80/180 (44%), Gaps = 40/180 (22%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF------------------------ 64
+ ++FDE+S+ D+ S NS + Y RS + + LF
Sbjct: 162 SRKLFDEMSNRDVVSWNSMIIGYLRSGDLDQSLNLFRKMKINRNVITWNSIITGFVQGGR 221
Query: 65 ------------CYMHSTCLNLTA----YTFTPVLGACSALPAPERGKQVHALMIKGGTD 108
C +N T VL AC+ L A + GK VH+ + + G +
Sbjct: 222 PKEALEFFHEMQCLRDDDGINNKVRPDKITIASVLSACAHLGAIDHGKWVHSYLRRSGLE 281
Query: 109 SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V+ TAL+DMY K G L + E F+E+ KD + W A++S F +G KEAF +F M
Sbjct: 282 CDMVIGTALVDMYGKCGCLQRAYEVFREMSEKDTLAWTAMISVFALNGFGKEAFDMFNEM 341
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 68/152 (44%), Gaps = 7/152 (4%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC-----YMHSTCLNLT--AYTFT 80
Y +F I +L N + +Y N A C Y C +++ TF
Sbjct: 53 YAADIFHYIKKPNLPFYNIMIRAYASKSNVDYDDARLCQALILYKQMLCNDISPDCLTFP 112
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L C+ A G+ +H IK G S+ V+ +L+ YS + S + F E+ +
Sbjct: 113 FLLKECTRNVAIYGGRGIHGHAIKLGLYSDLFVQNSLISFYSACEFVSNSRKLFDEMSNR 172
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
DVV+WN+++ +LR G ++ +F+ M R
Sbjct: 173 DVVSWNSMIIGYLRSGDLDQSLNLFRKMKINR 204
>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
Length = 1062
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 74/129 (57%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D S NS + Y + + C M + + TF+ VL AC+++ A ERG ++H
Sbjct: 652 DAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMH 711
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A ++ +S+ VV++AL+DMYSK G + + + F + K+ +WN+++S + RHGL +
Sbjct: 712 AFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGR 771
Query: 160 EAFGVFQAM 168
+A +F+ M
Sbjct: 772 KALEIFEEM 780
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 17 SIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMH 68
S+++AL K Y ++F+ +S D+ S NS + S P T ++ F M
Sbjct: 520 SVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMM 578
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ L TF L A + L E GKQ+H++M+K G + V ALM Y+K G +
Sbjct: 579 KSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVD 638
Query: 129 ESVEAFKEIEF-KDVVTWNALLSSFLRHGLAKEAF 162
F + +D ++WN+++S ++ +G +EA
Sbjct: 639 SCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAM 673
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF + D S N+ + + ++ A +C M + + + L +C+ L
Sbjct: 439 RVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG 498
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+Q+H +K G + V AL+ MY + G + E E F + DVV+WN+++
Sbjct: 499 LLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM 557
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 75 TAYTFTPVLGACSALPAPER---GKQVHALMIKGGTDSEPVVKTALMDMYSKYG----LL 127
T++TF VL AC P+R QVH L+ K S V AL+ MY +L
Sbjct: 167 TSFTFGSVLRACQD-SGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPIL 225
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V F +D++TWNAL+S + + G A F +F+AM
Sbjct: 226 AQRV--FDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 50/90 (55%), Gaps = 5/90 (5%)
Query: 78 TFTPVLGACSALPAPE----RGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVE 132
T+ +L A + E +G++VHA +++ G + V L++MY+K G + ++
Sbjct: 380 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACR 439
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
F+ +E +D ++WN ++++ ++G + A
Sbjct: 440 VFQLMEARDRISWNTIITALDQNGYCEAAM 469
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 4 FIRMTNFPAKTCISIADALPKRY--------VYTHQVFDEISHGDLSSLNSQLFSYTRSR 55
+ T F + T ++ +AL Y + +VFD DL + N+ + Y +
Sbjct: 195 LVSKTEFTSNT--TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRG 252
Query: 56 NFPATWALFCYMH----STCLNLTAYTFTPVLGACSALPAPERG--KQVHALMIKGGTDS 109
+ T+ LF M L T +TF ++ A + L + G Q+ ++K G S
Sbjct: 253 DAICTFTLFRAMQYDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSS 311
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ V +AL+ ++++G+L E+ + + ++ ++ VT N L++ ++ + A +F
Sbjct: 312 DLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF 367
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
C A P + +H ++K G + + L++ Y+K L + F + ++ V+
Sbjct: 79 GCDASP-----ESLHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPGRNAVS 133
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
W L+S + GL ++AF +F+AM RE
Sbjct: 134 WTCLISGHVLSGLPEDAFPLFRAMLRE 160
Score = 36.6 bits (83), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 50/126 (39%), Gaps = 1/126 (0%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y +VF +S + S NS + Y R +F M + + TF VL
Sbjct: 738 RIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLS 797
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVV 143
ACS ERG LM G + ++D+ + G L + E K + K + +
Sbjct: 798 ACSHAGLVERGLDYFELMEDYGILPRIEHYSCVIDLLGRAGELDKIQEYMKRMPMKPNTL 857
Query: 144 TWNALL 149
W +L
Sbjct: 858 IWRTVL 863
>gi|115486992|ref|NP_001065983.1| Os12g0114400 [Oryza sativa Japonica Group]
gi|113648490|dbj|BAF29002.1| Os12g0114400, partial [Oryza sativa Japonica Group]
Length = 504
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+ D S NS + YT+ + +F M + T T VLGAC+ +
Sbjct: 216 RIFSEMPERDAVSWNSLISGYTKLGKYTQALGIFQEMQENGIQPTELTLVLVLGACAKIG 275
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G +H + G ++ +V AL+DMY+K G+L + + F + +D+ WNA++
Sbjct: 276 KLDLGTNIHRNLQNKGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIV 335
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F HG ++EA +F +M E
Sbjct: 336 GFSVHGCSREALELFDSMKIE 356
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
LF++ S + P F + +C A F A +A +G ++H ++K G
Sbjct: 74 LFNHASSCSLPTPLPTFPALLKSC----ARAFNHSSRASAASVFVSKGMELHCRVLKLGC 129
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG---V 164
+ V+ AL+ MY K+G LG++ +AF E+ K+ V+WNAL+ + H A + G V
Sbjct: 130 GKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGA---HRAAADWMGADRV 186
Query: 165 FQAM 168
QAM
Sbjct: 187 SQAM 190
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ G + E+ F E+ +D V+WN+L+S + + G +A G+FQ M ++
Sbjct: 207 RIGYMDEAARIFSEMPERDAVSWNSLISGYTKLGKYTQALGIFQEMQENGIQ 258
>gi|413946224|gb|AFW78873.1| hypothetical protein ZEAMMB73_227843 [Zea mays]
Length = 778
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD S D S N+ + Y++S+ + LF M + A +F L ACS L A
Sbjct: 479 IFDR-SEKDGVSYNTLIVGYSQSQCCFESLHLFQQMRLAGIEHDAVSFMGCLSACSNLSA 537
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++GK++H +++K DS P + +L+D+Y+K G+L + + F I KDV +WN ++
Sbjct: 538 FKQGKEIHGVLVKRLLDSHPFLANSLLDVYTKGGMLDTASKIFNRITQKDVASWNTMILG 597
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+ HG AF +F M + +E+
Sbjct: 598 YGMHGQIDVAFELFDLMKDDGIEY 621
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 6/168 (3%)
Query: 10 FPAKTCISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
F + +++ +AL Y + VF+ + + S NS + + + +
Sbjct: 249 FGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEKNEVSWNSAIGCFAHAGFHEDVLEM 308
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M + + T + +L A L GK++H I+ +S+ + LMDMY+K
Sbjct: 309 FRLMSEHDVTPGSVTLSSLLPALVDLGYFHLGKELHGYSIRRAVESDIFIANTLMDMYAK 368
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+G ++ F+ IE ++VV+WNA++++ ++G EAF + M +
Sbjct: 369 FGCSEKASAIFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKN 416
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A+ R +VFDE+ D+ S NS + + + M + + + +
Sbjct: 165 AVCGRAADARRVFDEMPARDVVSWNSLVSALLTNGMLEDAKRAVVGMMRSGVPVNVASLV 224
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L AC G VH L++K G +S + AL+DMY K+G L S+ F ++ K
Sbjct: 225 SILPACGTERDEGFGLCVHGLVLKFGLNSVVNLGNALVDMYGKFGDLESSMHVFNGMQEK 284
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ V+WN+ + F G ++ +F+ M+ V
Sbjct: 285 NEVSWNSAIGCFAHAGFHEDVLEMFRLMSEHDV 317
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ I ++ S N+ + + T++ + L M ++T +L ACS + +
Sbjct: 378 IFENIEVRNVVSWNAMIANLTQNGAEAEAFRLVIEMQKNGECPNSFTLVNLLPACSRVAS 437
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GKQ+HA I+ S+ V AL+D+Y+K G L + F E KD V++N L+
Sbjct: 438 VKMGKQIHAWSIRRSLMSDLFVSNALIDVYAKCGQLNLARYIFDRSE-KDGVSYNTLIVG 496
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + E+ +FQ M +E
Sbjct: 497 YSQSQCCFESLHLFQQMRLAGIE 519
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ I+ D++S N+ + Y + LF M + ++ VL CS
Sbjct: 578 KIFNRITQKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGIEYDHVSYIAVLSVCSHGG 637
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
+RGK+ + MI + + ++D+ + G L ES E + + F+ + W ALL
Sbjct: 638 LVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESAEIIRNMPFRANSDVWGALL 697
Query: 150 SSFLRHG 156
S HG
Sbjct: 698 GSCRIHG 704
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 92 PERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
P +G ++HA ++ G V L+ Y+ G ++ F E+ +DVV+WN+L+S
Sbjct: 134 PAKGAELHAAALRRGLLLADVFAGNTLVTFYAVCGRAADARRVFDEMPARDVVSWNSLVS 193
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ L +G+ ++A M R V
Sbjct: 194 ALLTNGMLEDAKRAVVGMMRSGV 216
>gi|77553484|gb|ABA96280.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125578286|gb|EAZ19432.1| hypothetical protein OsJ_34992 [Oryza sativa Japonica Group]
Length = 518
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+ D S NS + YT+ + +F M + T T VLGAC+ +
Sbjct: 230 RIFSEMPERDAVSWNSLISGYTKLGKYTQALGIFQEMQENGIQPTELTLVLVLGACAKIG 289
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G +H + G ++ +V AL+DMY+K G+L + + F + +D+ WNA++
Sbjct: 290 KLDLGTNIHRNLQNKGIVADGLVGNALIDMYAKCGMLDLAKKVFDRMSMRDITCWNAMIV 349
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F HG ++EA +F +M E
Sbjct: 350 GFSVHGCSREALELFDSMKIE 370
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
LF++ S + P F + +C A F A +A +G ++H ++K G
Sbjct: 88 LFNHASSCSLPTPLPTFPALLKSC----ARAFNHSSRASAASVFVSKGMELHCRVLKLGC 143
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG---V 164
+ V+ AL+ MY K+G LG++ +AF E+ K+ V+WNAL+ + H A + G V
Sbjct: 144 GKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGA---HRAAADWMGADRV 200
Query: 165 FQAM 168
QAM
Sbjct: 201 SQAM 204
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ G + E+ F E+ +D V+WN+L+S + + G +A G+FQ M ++
Sbjct: 221 RIGYMDEAARIFSEMPERDAVSWNSLISGYTKLGKYTQALGIFQEMQENGIQ 272
>gi|357511423|ref|XP_003626000.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501015|gb|AES82218.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 607
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 7/165 (4%)
Query: 10 FPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
P + IS L YV QV FD++S ++ S + + Y +++ F L
Sbjct: 198 MPQRNIISWT-TLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKL 256
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M T +TF+ VL AC+ + G Q+H +IK G ++ + T+L+DMY+K
Sbjct: 257 FVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAK 316
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + + F+ I K++V+WNA++ + HGLA A F M
Sbjct: 317 CGDMDAAFGVFESIRDKNLVSWNAIIGGYASHGLATRALEEFDRM 361
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
H +FD++ D S N L + R+RN + F M + YT + +L A +
Sbjct: 59 VHDLFDKMPLKDAVSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVIS 118
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV--EAFKEIEFKDVVTWN 146
+QVHAL G V ++L+ Y+ GL E AF +I KDV +WN
Sbjct: 119 TELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYA--GLKEEEALGRAFNDISMKDVTSWN 176
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
AL+SS++ G +A F M + +
Sbjct: 177 ALVSSYMELGKFVDAQTAFDQMPQRNI 203
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
KQ H L+ + V +M Y ++ +G + F ++ KD V+WN +LS F R
Sbjct: 25 KQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDAVSWNIMLSGFQRT 84
Query: 156 GLAKEAFGVFQAMTRERV 173
++ + F M R V
Sbjct: 85 RNSEGLYRCFLQMGRAGV 102
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + N+ LF M T + T V+ AC+
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH + G S + AL+D+YSK G L + F+ + +KDV++WN L+
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 340 GGYTHMNLYKEALLLFQEMLR 360
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF I +L N+ + S + + L+ M S L +YTF VL +C+
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA-------------- 133
A + G+Q+H ++K G D + V T+L+ MY + G L ++ +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 134 -----------------FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F EI KDVV+WNA++S + G KEA +F+ M + V
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + + D+ S N+ + YT + LF M + T +L AC+ L A
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 92 PERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H + K G + ++T+L+DMY+K G + + + F I K + +WNA++
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F HG A +F +F M + ++
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQ 467
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVF+ I H LSS N+ +F + A++ LF M + TF +L ACS
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ + M + + + M D+ GL E+ E +E + D V W +
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 543
Query: 148 LLSSFLRHG 156
LL + HG
Sbjct: 544 LLKACKMHG 552
>gi|225456505|ref|XP_002280974.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50990
[Vitis vinifera]
Length = 523
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VF ++ D+ + NS + R+ F F M ++ + +TF V+ C+
Sbjct: 106 FAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCA 165
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + + VH LMI+ ++ +AL+D+YSK G + + + F I+ DV WN+
Sbjct: 166 RLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNS 225
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ HGLA +A GVF M E V
Sbjct: 226 MINGLAIHGLALDAIGVFSQMEMESV 251
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I H D+S NS + +F M ++ + TF +L ACS
Sbjct: 210 KVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCG 269
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
E+G++ LM + +P ++ A++D+ + GL+ E+ K + + D+V W A
Sbjct: 270 LVEQGRRYFDLM-RRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRA 328
Query: 148 LLSS 151
LLS+
Sbjct: 329 LLSA 332
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
Y + ++F + + +TF+ ++ AC+ A E+G Q+HA ++K D
Sbjct: 283 GYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDE 342
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+P V + L+DMY K GLL +++AF EI + WN+L+S F +HGL K+A F+ M
Sbjct: 343 DPFVSSILVDMYGKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMV 402
Query: 170 RERVE 174
V+
Sbjct: 403 DRGVK 407
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 76/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + +L S + + +++ F FC M T + F+ + AC++L
Sbjct: 61 KLFDTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLG 120
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E GKQ+H L +K G SE V + L DMYSK G + ++ + F+E+ KD V+W A++
Sbjct: 121 SIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMID 180
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + G +EA F+ M E V
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEV 203
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D S + + Y++ F F M + + + LGAC AL
Sbjct: 162 KVFEEMPCKDEVSWTAMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALK 221
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK-EIEFKDVVTWNALL 149
A + G+ VH+ ++K G +S+ V AL DMYSK G + + F + E ++VV++ L+
Sbjct: 222 ACKFGRSVHSSVVKLGFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLI 281
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++ VF + R+ +E
Sbjct: 282 DGYVETEQIEKGLSVFVELRRQGIE 306
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
RGKQ+HAL+I G + L++MYSK G L +++ F + +++V+W A++S
Sbjct: 23 RGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRNLVSWTAMISGLS 82
Query: 154 RHGLAKEAFGVFQAM 168
++ EA F M
Sbjct: 83 QNSKFSEAIRTFCGM 97
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRN 56
F+ + F + +I +L YV + FD+I + S +S + Y +
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
F LF + + ++ + ++G + +GKQ+ AL +K + E V +
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++DMY K GL+ E+ + F E++ KDV++W +++ + +HGL K++ +F M R +E
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VFD + ++ S ++ + + + + + +LF M + +TF+ L AC L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+G Q+H +K G + V +L+DMYSK G + E+ + F+ I + +++WNA++
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ G +A F M ++
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIK 205
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K R +VF I L S N+ + + + F M +
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 75 --TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGES 130
+T T +L ACS+ GKQ+H +++ G S + +L+D+Y K G L +
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+AF +I+ K +++W++L+ + + G EA G+F+ +
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+L C+ ++G QVH ++K G+ + L+DMY K + + F +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++VV+W+AL+S + +G K + +F M R+ +
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 103
>gi|255641788|gb|ACU21163.1| unknown [Glycine max]
Length = 481
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 29 THQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
H +FD+++ D S+ NS + Y + ++ AL+ M + +TF VL C
Sbjct: 144 AHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVC 203
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + + G++VH I+ G ++ + AL+DMYSK G + ++ + F ++ +D V+WN
Sbjct: 204 AGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSWN 263
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++L++++ HGL +A +F+ M E E
Sbjct: 264 SMLTAYVHHGLEVQAMNIFRQMLLEGCE 291
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD++ H D S NS L +Y +F M + + + VL
Sbjct: 245 VKARKVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGV 304
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+L G Q+H +I G + + +L+ MYS +G L ++ F + +DVV+WN
Sbjct: 305 SSLGL---GVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWN 361
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++S+ H +EA F+ M V+
Sbjct: 362 SIISA---HCKRREALAFFEQMEGAGVQ 386
>gi|224112267|ref|XP_002316137.1| predicted protein [Populus trichocarpa]
gi|222865177|gb|EEF02308.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFDEI + S N+ + Y RS +LF + + L T VL +C+ L
Sbjct: 182 QRVFDEILEPCVVSYNAIITGYARSSRPNEALSLFRQLQARKLKPNDVTVLSVLSSCALL 241
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + GK +H + K G D V TAL+DMY+K G L ++ F+ + +D W+A++
Sbjct: 242 GALDLGKWIHEYVKKNGLDKYVKVNTALIDMYAKCGSLDGAISVFESMSVRDTQAWSAMI 301
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
++ HG ++ +F+ M R +V+
Sbjct: 302 VAYAMHGQGQDVMSMFEEMARAKVQ 326
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y HQ+F+ I D+ NS Y+RS +LF + L YTF +L AC
Sbjct: 79 YAHQLFEAIPQPDIVLFNSMFRGYSRSNAPLKAISLFIKALNYNLLPDDYTFPSLLKACV 138
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A ++GKQ+H L IK G + P V L++MY+ + + F EI VV++NA
Sbjct: 139 VAKAFQQGKQLHCLAIKLGLNENPYVCPTLINMYAGCNDVDGAQRVFDEILEPCVVSYNA 198
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + R EA +F+ + +++
Sbjct: 199 IITGYARSSRPNEALSLFRQLQARKLK 225
>gi|410109999|gb|AFV61079.1| pentatricopeptide repeat-containing protein 81, partial [Lantana
trifolia]
Length = 391
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 198 ISNALVSMYLKSNSRNVEXALKIFERINVKDLVSWNTILTGXSQNGLSENALRLFQNIHV 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + YTF VL +CS L G+Q+H L++K G + +AL+ MYSK G++ +
Sbjct: 258 DHLVIDQYTFAAVLRSCSDLATLXLGRQIHVLVVKSGLEGNEYXASALIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG A +F M R++
Sbjct: 318 AWESFESSHKETSVTWNSIIFAYAQHGQGXXALDLFYLMXERRIKL 363
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 31 QVFDE-ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 115 RVFDSSXGYRDLVTWNSMLAAYLEHNLEEXGFNIFXEMVRXRLEMDAYTLSSVISACFED 174
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNA 147
GK +HA +IK G D + AL+ MY K + +++ F+ I KD+V+WN
Sbjct: 175 TQQSLGKSLHASVIKKGLDEVXQISNALVSMYLKSNSRNVEXALKIFERINVKDLVSWNT 234
Query: 148 LLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 235 ILTGXSQNGLSENALRLFQ 253
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R +VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 7 RRVEDASKVFKYMRERNAVSWNALIGGYAEMGNLERCVXLFVGMEMXGVXVDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDV 142
+ + + +Q+H ++K G + E V A + Y++ G + + F ++D+
Sbjct: 67 TLLNDAESYDLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEXAKRVFDSSXGYRDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M R R+E
Sbjct: 127 VTWNSMLAAYLEHNLEEXGFNIFXEMVRXRLEM 159
>gi|413944102|gb|AFW76751.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 248
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + H + S + + Y ++ LF +M + +TF + AC+
Sbjct: 69 RVFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGAR 128
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+HA KG + V++ALMDM+ + G +G++ F E+E KD+V+WN+L+
Sbjct: 129 CARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMR 188
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F+ +A G+F +M R+
Sbjct: 189 GFVEREHCNDALGLFDSMLRD 209
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVE 132
A ++ +L + A +GK VH I + S P + T L+ YS +G + +
Sbjct: 10 AAALYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARR 69
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + + VV+W A++S + ++ +EA +F M R
Sbjct: 70 VFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLR 107
>gi|410110003|gb|AFV61081.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
alba]
Length = 358
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 198 ISNALVSMYLKSNSRNVEDALKIFEHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 258 DHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ E+F+ + VTWN+++ ++ +HG K A +F MT
Sbjct: 318 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTE 358
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + ++ AC
Sbjct: 115 RVFDS-SDGYRDLVTWNSMLAAYLGHNLEEYGFNIFLEMVRRRLEMDAYTLSSIISACFE 173
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++++ F+ I KD+V+WN
Sbjct: 174 DTQQSLGKSLHGFVIKKGLDQVTQISNALVSMYLKSNSRNVEDALKIFEHINVKDLVSWN 233
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 234 TILTGLSQNGLSENALRLFQ 253
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 7 RRVXDANKVFKYMGERNAVSWNALIGGYAEMGNLERCXTLFVGMEMEGVRVDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ +Q+H ++K G + E V A++ Y++ G + ++ F + ++D+
Sbjct: 67 TLLCDAELYDLTRQLHGKIMKRGLEYENTVLNAMITAYAECGCIEDAKRVFDSSDGYRDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M R R+E
Sbjct: 127 VTWNSMLAAYLGHNLEEYGFNIFLEMVRRRLE 158
>gi|302793025|ref|XP_002978278.1| hypothetical protein SELMODRAFT_108052 [Selaginella moellendorffii]
gi|300154299|gb|EFJ20935.1| hypothetical protein SELMODRAFT_108052 [Selaginella moellendorffii]
Length = 337
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 6/164 (3%)
Query: 17 SIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
SIA L Y VF+++ DL S N+ + Y + +F +M
Sbjct: 46 SIASGLVNMYRKCGSLTGARSVFNKMDRNDLLSWNALIAGYAEQGDSHEALQVFRWMACE 105
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
+ TF VL ACS+L A E+G+ VHA ++ G DS+ +K +L+++Y K G L ++
Sbjct: 106 GMKSDRVTFLSVLEACSSLTALEQGRAVHASIVSRGLDSDTGLKNSLINLYGKCGSLKDA 165
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F + +D+VTWN++++++ HG + + VF M + ++
Sbjct: 166 ESLFDCMRCRDLVTWNSMITTYSHHGRDEISLEVFMQMKLDGIQ 209
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
F ++ ACS L +G +VH + GG D + + + L++MY K G L + F ++
Sbjct: 12 VFVSLIDACSCLGDLRQGMRVHERLHAGGFDIDNSIASGLVNMYRKCGSLTGARSVFNKM 71
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVF-----QAMTRERVEF 175
+ D+++WNAL++ + G + EA VF + M +RV F
Sbjct: 72 DRNDLLSWNALIAGYAEQGDSHEALQVFRWMACEGMKSDRVTF 114
>gi|147811906|emb|CAN68178.1| hypothetical protein VITISV_000846 [Vitis vinifera]
Length = 633
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 7/166 (4%)
Query: 9 NFPAKTCISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
+ P K +S + L RY+ + VF E+ D S NS + Y + +++ A
Sbjct: 210 SMPGKNVVS-WNMLIARYIRLGKIEDAKAVFQEMPERDAVSWNSMIAGYVQIKDYARALA 268
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + T T VLGAC+ A E G+++H + + E + AL+DMY+
Sbjct: 269 LFREMEIANVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDMYA 328
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K G L + E F E++ K + WNA++ S HG +EA +F M
Sbjct: 329 KCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTM 374
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGA 85
VY +F++ + + N+ + +Y +S FP L+ +MH + + + L A
Sbjct: 57 VYAQAIFEDTTMDNPFVCNTMIRAYAKSV-FPIKAIYLYNFMHRKDIKSDHFMYPFGLKA 115
Query: 86 C-------------SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
C + L +G ++H + + G D + ++ +L+ +YS+ G L +
Sbjct: 116 CARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARR 175
Query: 133 AFKEIEFKDVVTWNALLSSF 152
F E+ K + +WN ++S++
Sbjct: 176 VFDEMTEKTITSWNVMISAY 195
>gi|39546235|emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
gi|125549842|gb|EAY95664.1| hypothetical protein OsI_17530 [Oryza sativa Indica Group]
gi|215686910|dbj|BAG90780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++D IS DL S + + YT RN+ LFC +H L + + VL C+++
Sbjct: 271 IYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVA 330
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+HA M K + + AL+DMY+K G ++ AF E+ +++V++W +L++
Sbjct: 331 SARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLIT 390
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R+G ++A +F M + V
Sbjct: 391 ACGRNGSGEDAVTLFNRMVEDGVR 414
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + H + S + + Y R+ LF M ++ +T+ AC+
Sbjct: 67 RKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGA 126
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+QVHA KG + V++ALMDM+ + G + ++ + F E+ KDVV+WNAL+
Sbjct: 127 GCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALI 186
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
F+ G +A G+F +M +E
Sbjct: 187 RGFVERGHDGDALGLFSSMLKE 208
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVE 132
TA ++ +L C + A +GK VH + + S P + T L+ Y+++G + + +
Sbjct: 10 TAPLYSSLLQCCISSCAFRQGKSVHG-RVAAASASPPDLHLSTKLVIFYARFGDVAAARK 68
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + + VV+W A++S + R+G +EA +F M
Sbjct: 69 VFDGMPHRSVVSWTAMVSGYARNGRPREALELFALM 104
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA Q+F E+ D+ S N+ + + + LF M +
Sbjct: 161 CGSVEDA--------RQLFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIP 212
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
YT L AC + + +H+ +IK G E VV +L++ Y+K + + +
Sbjct: 213 DHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIY 272
Query: 135 KEIEFKDVVTWNALLSSF-LRHGLAKEAFGVFQAMTRE 171
I D+V+ AL+S + + +++A +F + R+
Sbjct: 273 DSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRK 310
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ F IS D NS + S +++ LF M + + L AC+ L
Sbjct: 505 HQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANL 564
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
PA GK++HA M++G S+ ++AL+DMYSK G L + F +E K+ V+WN+++
Sbjct: 565 PALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMMEEKNEVSWNSII 624
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+++ HG K++ +F M + ++
Sbjct: 625 AAYGNHGRLKDSLNLFHGMLGDGIQ 649
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++FD+ + D+ + + Y + +F ++ + + T VL AC+ L
Sbjct: 404 HKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGL 463
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A GK++H ++K G V +A+MDMY+K G L + + F I KD V WN+++
Sbjct: 464 AALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGKLDLAHQTFIGISXKDAVCWNSMI 523
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+S ++G +EA +F+ M
Sbjct: 524 TSCSQNGKPEEAIDLFRQM 542
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D N L Y ++ ++ +F M T N + TF VL C++
Sbjct: 204 LFDRMPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIM 263
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q+H L++ G + + V L+ MY+K G L ++ F + D+VTWN ++S
Sbjct: 264 INFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISG 323
Query: 152 FLRHGLAKEAFGVFQAM 168
++++G EA +F M
Sbjct: 324 YVQNGFMDEASCLFHEM 340
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 71/144 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + DL + N + Y ++ LF M S + + TF+ L S
Sbjct: 304 RLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGA 363
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H +I+ G + +K+AL+D+Y K + + + F + D+V A++S
Sbjct: 364 TLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMIS 423
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +G+ A +F+ + +ER+
Sbjct: 424 GYVLNGMNNNALEIFRWLLQERMR 447
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L + G+ VH + G + + V ++L+ YS+ G + ++ F
Sbjct: 148 YTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDR 207
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ KD V WN +L+ ++++G A GVF M R
Sbjct: 208 MPSKDGVLWNVMLNGYVKNGDWDNATGVFMEMRR 241
>gi|296090683|emb|CBI41082.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 4/146 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGA 85
+Y VFDEI D N+ + +Y S+N + +LF M H C+ + +Y+ + V+ A
Sbjct: 49 LYARSVFDEIPSPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQA 108
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI---EFKDV 142
C L P G+++H ++K G S+ V+TAL++MY+K+G + + E+ + +D+
Sbjct: 109 CGRLKDPGNGQKLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLRDL 168
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+WN ++ G + EA +F M
Sbjct: 169 VSWNTMIHGHASLGDSNEALRLFHEM 194
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Query: 31 QVFDEISHGDLSSL---NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ DE++H DL L N+ + + + LF M + T VL AC
Sbjct: 155 NILDEMAHPDLRDLVSWNTMIHGHASLGDSNEALRLFHEMQLANVLPDKVTMVSVLSACG 214
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+ A GK +H + + + + + T+L+DMY+K G + S+ K + +
Sbjct: 215 DVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRWDKVVNVR 267
>gi|147860852|emb|CAN83162.1| hypothetical protein VITISV_022557 [Vitis vinifera]
Length = 562
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VF ++ D+ + NS + R+ F F M ++ + +TF V+ C+
Sbjct: 145 FAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCA 204
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + + VH LMI+ ++ +AL+D+YSK G + + + F I+ DV WN+
Sbjct: 205 RLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNS 264
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ HGLA +A GVF M E V
Sbjct: 265 MINGLAIHGLALDAIGVFSQMEMESV 290
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 60/124 (48%), Gaps = 4/124 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I H D+S NS + +F M ++ + TF +L ACS
Sbjct: 249 KVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCG 308
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
E+G++ LM + +P ++ A++D+ + GL+ E+ K + + D+V W A
Sbjct: 309 LVEQGRRYFDLM-RRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRA 367
Query: 148 LLSS 151
LLS+
Sbjct: 368 LLSA 371
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VFD + D+ S N+ + +Y + +F M + +T VL AC++L
Sbjct: 258 EVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASL 317
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +G+ VH + K G + E + TAL+DMYSK G + +++E F+ +DV TWN+++
Sbjct: 318 GSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSII 377
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S HGL K+A +F M E
Sbjct: 378 SDLSVHGLGKDALEIFSEMVYE 399
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
PK Y H + + I + + NS + +Y S +F M + Y+FT V
Sbjct: 87 PKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFV 146
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC+A E G+Q+H L IK G ++ V+ L+++Y + G + + + +D
Sbjct: 147 LKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA 206
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V+WN+LLS++L GL EA +F M VE
Sbjct: 207 VSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ Y+ GL+ E+ E F + +DVV+WNA+++++ G E VF M + E
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE 300
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +H +F +IS D + NS + S+ ++ LF M + + T + VL
Sbjct: 499 RLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLS 558
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++LPA GK++H ++IKG ++ ++AL+DMY K G L + F+ + K+ V+
Sbjct: 559 ACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS 618
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN++++S+ +GL KE+ + + M E
Sbjct: 619 WNSIIASYGAYGLVKESVSLLRHMQEE 645
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F Y+ + A VL AC+++ A + G+++H+ +K + V++ALMDMY+
Sbjct: 436 MFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYA 495
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K G L S F +I KD VTWN+++SSF ++G +EA +F+ M E V++
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD ++ D N + Y ++ + + LF M ++ T L +
Sbjct: 202 QVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATES 261
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H L +K G +SE V L+ MY+K L + + F + D+VTWN ++S
Sbjct: 262 DLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMIS 321
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++G +A +F M + +
Sbjct: 322 GCVQNGFVDQALLLFCDMQKSGIR 345
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
++TF V+ +C+AL A G+ VH G D + V +AL+ MY+ GLL ++ + F
Sbjct: 146 SHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFD 205
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D V WN ++ +++ G A +F M
Sbjct: 206 GMAERDCVLWNVMMDGYVKAGSVSSAVELFGDM 238
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 69/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + DL + N + ++ LFC M + + + T +L A + L
Sbjct: 303 KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H +++ + + +AL+D+Y K + + + + DVV + ++S
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +G+++EA +F+ + + +
Sbjct: 423 GYVLNGMSQEAVKMFRYLLEQGIR 446
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 82/147 (55%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +H +F +IS D + NS + S+ ++ LF M + + T + VL
Sbjct: 499 RLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLS 558
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++LPA GK++H ++IKG ++ ++AL+DMY K G L + F+ + K+ V+
Sbjct: 559 ACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVS 618
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN++++S+ +GL KE+ + + M E
Sbjct: 619 WNSIIASYGAYGLVKESVSLLRHMQEE 645
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 67/113 (59%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F Y+ + A VL AC+++ A + G+++H+ +K + V++ALMDMY+
Sbjct: 436 MFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYA 495
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K G L S F +I KD VTWN+++SSF ++G +EA +F+ M E V++
Sbjct: 496 KCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKY 548
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD ++ D N + Y ++ + + LF M ++ T L +
Sbjct: 202 QVFDGMAERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATES 261
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H L +K G +SE V L+ MY+K L + + F + D+VTWN ++S
Sbjct: 262 DLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMIS 321
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++G +A +F M + +
Sbjct: 322 GCVQNGFVDQALLLFCDMQKSGIR 345
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
++TF V+ +C+AL A G+ VH G D + V +AL+ MY+ GLL ++ + F
Sbjct: 146 SHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFD 205
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D V WN ++ +++ G A +F M
Sbjct: 206 GMAERDCVLWNVMMDGYVKAGSVSSAVELFGDM 238
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 69/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + DL + N + ++ LFC M + + + T +L A + L
Sbjct: 303 KLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLN 362
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H +++ + + +AL+D+Y K + + + + DVV + ++S
Sbjct: 363 GFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMIS 422
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +G+++EA +F+ + + +
Sbjct: 423 GYVLNGMSQEAVKMFRYLLEQGIR 446
>gi|296083798|emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%), Gaps = 2/145 (1%)
Query: 31 QVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD + D +S+ N+ + +Y +S +ALF M + L + +L AC+
Sbjct: 150 RVFDNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTG 209
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A E+GK +H + K G + + + T ++DMY K G L ++ E F E+ K + +WN +
Sbjct: 210 LGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCM 269
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+ HG + A +F+ M RE V
Sbjct: 270 IGGLAMHGKGEAAIELFKEMEREMV 294
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T+ P++ AC A E GKQ+HA ++K G ++ L+ MY + L ++ F
Sbjct: 93 NKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVF 152
Query: 135 KEIEFKD--VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ +D V+WNA+++++++ EAF +F M E V
Sbjct: 153 DNMPQRDRNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENV 193
>gi|356529889|ref|XP_003533519.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic-like [Glycine max]
Length = 526
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 83/148 (56%), Gaps = 2/148 (1%)
Query: 29 THQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
H +FD+++ D S+ NS + Y + ++ AL+ M + +TF VL C
Sbjct: 144 AHDLFDQMAKRDTSAFPWNSLISGYAQVGHYDEAIALYFQMVEEGVEADLFTFPRVLKVC 203
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + + G++VH I+ G ++ + AL+DMYSK G + ++ + F ++ +D V+WN
Sbjct: 204 AGIGSVQVGEEVHRHAIRAGFAADGFILNALVDMYSKCGDIVKARKVFDKMPHRDPVSWN 263
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++L++++ HGL +A +F+ M E E
Sbjct: 264 SMLTAYVHHGLEVQAMNIFRQMLLEGCE 291
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD++ H D S NS L +Y +F M + + + VL
Sbjct: 245 VKARKVFDKMPHRDPVSWNSMLTAYVHHGLEVQAMNIFRQMLLEGCEPDSVSISTVLTGV 304
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+L G Q+H +I G + + +L+ MYS +G L ++ F + +DVV+WN
Sbjct: 305 SSLGL---GVQIHGWVISQGHEWNLSIANSLIMMYSNHGRLEKARWVFNLMPERDVVSWN 361
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++S+ H +EA F+ M V+
Sbjct: 362 SIISA---HCKRREALAFFEQMEGAGVQ 386
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + D+ S NS + ++ + R A F M + TF +L AC+ L
Sbjct: 348 VFNLMPERDVVSWNSIISAHCKRRE---ALAFFEQMEGAGVQPDKITFVSILSACAYLGL 404
Query: 92 PERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKE---IEFKDVVTWN 146
+ G+++ ALM G +P+++ ++++Y + GL+ ++ + E W
Sbjct: 405 LKDGERLFALMC-GKYKIKPIMEHYGCMVNLYGRAGLIKKAYSIIVDGIGTEAAGPTLWG 463
Query: 147 ALLSSFLRHGLA 158
ALL + HG A
Sbjct: 464 ALLYACFMHGDA 475
>gi|222629606|gb|EEE61738.1| hypothetical protein OsJ_16261 [Oryza sativa Japonica Group]
Length = 767
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++D IS DL S + + YT RN+ LFC +H L + + VL C+++
Sbjct: 479 IYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDGVLLSSVLCLCASVA 538
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+HA M K + + AL+DMY+K G ++ AF E+ +++V++W +L++
Sbjct: 539 SARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKRAFDEMPYRNVISWTSLIT 598
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R+G ++A +F M + V
Sbjct: 599 ACGRNGSGEDAVTLFNRMVEDGVR 622
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%)
Query: 35 EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPER 94
E H L S + + Y R+ LF M ++ +T+ AC+
Sbjct: 280 ECPHRSLVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARS 339
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+QVHA KG + V++ALMDM+ + G + ++ + F E+ KDVV+WNAL+ F+
Sbjct: 340 GEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVE 399
Query: 155 HGLAKEAFGVFQAMTRE 171
G +A G+F +M +E
Sbjct: 400 RGHDGDALGLFSSMLKE 416
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD + H + S + + Y R+ LF M ++ +T+ AC+
Sbjct: 112 ARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAG 171
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
G+QVHA KG + V++ALMDM+ + G + ++ + F E+ KDV
Sbjct: 172 AGCARSGEQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDV 225
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 5/113 (4%)
Query: 58 PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV--KT 115
P +A Y LNL + F +L C + A +GK VH + + S P + T
Sbjct: 41 PKKFAAHFYCRLVELNLNIFRF--LLLCCISSCAFRQGKSVHG-RVAAASASPPDLHLST 97
Query: 116 ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L+ Y+++G + + + F + + VV+W A++S + R+G +EA +F M
Sbjct: 98 KLVIFYARFGDVAAARKVFDGMPHRSVVSWTAMVSGYARNGRPREALELFALM 150
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA Q+F E+ D+ S N+ + + + LF M +
Sbjct: 369 CGSVEDA--------RQLFAEMGKKDVVSWNALIRGFVERGHDGDALGLFSSMLKEAMIP 420
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
YT L AC + + +H+ +IK G E VV +L++ Y+K + + +
Sbjct: 421 DHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLINSYAKCRSMSSARVIY 480
Query: 135 KEIEFKDVVTWNALLSSF-LRHGLAKEAFGVFQAMTRE 171
I D+V+ AL+S + + +++A +F + R+
Sbjct: 481 DSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRK 518
>gi|410110027|gb|AFV61093.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
micromera]
Length = 354
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F I+ DL S N+ L +++ LF +H
Sbjct: 174 ISNALVSMYLKSNSRNVEDALKIFXXINVKDLVSWNTILTGLSQNGLSENALRLFQNVHL 233
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 234 NHLVTDQYTFAAVLRSCSDLAXLQLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 293
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 294 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERXIKL 339
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 91 RVFDS-SDGYRDLVTWNSMLAAYLEHSLEEYGFNIFLDMVKQRLEMDAYTLSSVISACFE 149
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++++ F I KD+V+WN
Sbjct: 150 DTQQSLGKSLHGFVIKKGLDQVTQISNALVSMYLKSNSRNVEDALKIFXXINVKDLVSWN 209
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 210 TILTGLSQNGLSENALRLFQ 229
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y N LF M + TF P+L + + +Q+H +
Sbjct: 2 SWNALIGGYAEMGNLZRCITLFVGMEMEGXGVDDATFAPLLTLLCDAESYDLTRQLHGKI 61
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHGLAKEA 161
+K G + E V A + Y++ G ++ F + ++D+VTWN++L+++L H L +
Sbjct: 62 MKRGLEHENTVLNATITAYAECGCXEDAKRVFDSSDGYRDLVTWNSMLAAYLEHSLEEYG 121
Query: 162 FGVFQAMTRERVE 174
F +F M ++R+E
Sbjct: 122 FNIFLDMVKQRLE 134
>gi|356537365|ref|XP_003537198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Glycine max]
Length = 722
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F + + L S NS + + + + F + ST + AY+ + VL CS++
Sbjct: 431 QIFSGVPYKSLISWNSIISGFLMNGHPLQGLEQFSALLSTQVKPNAYSLSLVLSICSSMS 490
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQVH +++ G SE + AL+ MY+K G L +++ F + +D +TWNA++S
Sbjct: 491 AMSHGKQVHGYILRHGFSSEVSLGNALVTMYAKCGSLDKALRVFDAMVERDTITWNAIIS 550
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ +HG +EA F+AM
Sbjct: 551 AYAQHGRGEEAVCCFEAM 568
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 6/147 (4%)
Query: 31 QVFDEISHG---DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+VF+E G D S N+ + + + +F M C + T TF V+ +CS
Sbjct: 233 EVFEEAEEGGSRDYVSYNAMIDGFASVERSEDAFLIFRDMQKGCFDPTEVTFVSVMSSCS 292
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+L A G Q + IK G V A+M MYS +G + E F+ +E +DVV+WN
Sbjct: 293 SLRA---GCQAQSQAIKMGFVGCVAVNNAMMTMYSGFGEVIEVQNIFEGMEERDVVSWNI 349
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S FL+ L +EA + M RE +E
Sbjct: 350 MVSMFLQENLEEEAMLSYLKMRREGIE 376
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD I G ++ N+ + N + LF M+ + YTF +L CS L
Sbjct: 133 KVFDGIPKGHIAVWNAVITGCAEKGNRDFAFGLFRDMNKMGVKADKYTFATMLSLCS-LE 191
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE---FKDVVTWNA 147
+ G+ VH+++IK G V +L+ MY K G + ++ E F+E E +D V++NA
Sbjct: 192 LFDYGRHVHSVVIKSGFLGWTSVVNSLITMYFKCGCVVDACEVFEEAEEGGSRDYVSYNA 251
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
++ F +++AF +F+ M +
Sbjct: 252 MIDGFASVERSEDAFLIFRDMQK 274
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 44 LNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMI 103
LN L + RS + LF + HS+ Y + + A + G Q+HAL +
Sbjct: 14 LNHMLAALARSNQHTQSLKLFVHAHSS-FTPDHYILSTAITAAANARRAAFGAQLHALAV 72
Query: 104 KGGTDSEPVVKTALMDMYSKYGLLGESVE-AFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
+ G + V +L+ +Y+K SV+ F+EI+ D +W LLS+ + + A
Sbjct: 73 RTGLGAHSHVANSLLSLYAKAHRDLASVKLTFQEIDCPDAYSWTTLLSACAKLDSVEHAL 132
Query: 163 GVFQAMTRERV 173
VF + + +
Sbjct: 133 KVFDGIPKGHI 143
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 10 FPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
F + C+ A++L Y + ++ FD + +L S N+ + +Y ++ N L
Sbjct: 407 FSSVNCV--ANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F + + +A+TF +L +++ +G+Q+HA +IK G V AL+ MYS+
Sbjct: 465 FNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSR 524
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G + + + F+++E ++V++W ++++ F +HG A +A +F M E V
Sbjct: 525 CGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD+I ++ S + + Y + + LF M T + +TF+ L AC+ L
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL 389
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G+QV +K G S V +L+ MY++ G + ++ +AF + K+++++N ++
Sbjct: 390 AALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVI 449
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
++ ++ ++EA +F + +
Sbjct: 450 DAYAKNLNSEEALELFNEIEDQ 471
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA--- 133
+T + V+ AC+ + G+Q+H+ I+ G + V L++MY+K + G A
Sbjct: 272 FTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKI 331
Query: 134 FKEIEFKDVVTWNALLSSFL-RHGLAKEAFGVFQAMTRERV 173
F +I +V +W A+++ ++ + G +EA +F+ M V
Sbjct: 332 FDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHV 372
>gi|302142723|emb|CBI19926.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 10 FPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
F C+ + L + VFDE+ D+ S N+ + Y F + F M
Sbjct: 52 FLGNRCLDLFGELER----ARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQK 107
Query: 70 TCLNLTAYTFTP--VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
+ + +T++ VL A S L ++G Q+H+L++K G +S+ +V ++L++MY+K+GL+
Sbjct: 108 AGIRPSGFTYSTLIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLI 167
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ F +I +D+++WN ++ +G +A +F+ +
Sbjct: 168 DSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKEL 208
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
++ ++ C L + + K VHA +IK G ++ + +D++ G L + + F E+
Sbjct: 19 YSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLF---GELERARDVFDEMP 75
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+DVV+WN ++S ++ GL +AF F M +
Sbjct: 76 KRDVVSWNTMISGYVSFGLFDDAFRFFSEMQK 107
>gi|302769798|ref|XP_002968318.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
gi|300163962|gb|EFJ30572.1| hypothetical protein SELMODRAFT_599 [Selaginella moellendorffii]
Length = 666
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 64/99 (64%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
+T L AC+ E G+++HAL+I+ G +SE VV AL+ MY+ G L +++E F+
Sbjct: 217 GFTLASALAACTGPEMLEEGREIHALVIERGCESELVVGNALVSMYANCGTLQDALECFQ 276
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ ++VV+WNA++++++ H KEAF +F M E V+
Sbjct: 277 KMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQ 315
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R ++F+ + D+ + N L +Y LF M + + T+T +LG
Sbjct: 399 RLAEARKLFEVMEERDVITWNMILGAYVEREMAKEAVRLFRRMIAEGTKSNSITWTTMLG 458
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ G+++H L+ + G DSE V AL+DM+ K LG + +AF+ I KD +
Sbjct: 459 ACAGEALLAEGRRIHELIGERGADSELFVGNALVDMFGKCASLGGARQAFERIRGKDASS 518
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN L+++ ++G A+EA F M RE ++
Sbjct: 519 WNVLVAALAQNGDAEEALKQFLQMQREGIK 548
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 14 TCISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T IS+ +AL Y +VFD + H D+ S N+ + +Y ++ + LF M
Sbjct: 39 TQISVGNALVNMYGKCGSLALAREVFDGMDHRDVISWNAVITAYAQAGHCKEAMELFQAM 98
Query: 68 HSTC-LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYG 125
+ + TF V+ AC A E G ++ AL+ + G DS+ V+ AL++MYSK G
Sbjct: 99 QEDGRIEPDSVTFVAVVSACCDPSALEAGDKIFALVEERGLLDSDVVLGNALVNMYSKCG 158
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
L + F+ ++ +DVV+WNA++S+ RH A F+ M E
Sbjct: 159 SLKSATMVFERMKIRDVVSWNAIISALARHDRKDIAMQRFREMQLE 204
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+F L +C + + GK +H L+I+ G ++ V AL++MY K G L + E F +
Sbjct: 8 SFITALKSCVRIQSLAAGKFIHLLVIESGLLTQISVGNALVNMYGKCGSLALAREVFDGM 67
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE-RVE 174
+ +DV++WNA+++++ + G KEA +FQAM + R+E
Sbjct: 68 DHRDVISWNAVITAYAQAGHCKEAMELFQAMQEDGRIE 105
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 8/160 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C ++ DAL + F +++ ++ S N+ + +Y + +F M +
Sbjct: 264 NCGTLQDAL--------ECFQKMAQRNVVSWNAMIAAYVHHNCDKEAFRIFHQMQLEGVQ 315
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ TF L ACS A E G Q+H+++ + G +++ V A++ M++K L +++ A
Sbjct: 316 PNSVTFVTFLSACSTPAAFEDGLQLHSIVRESGLEADASVGNAVVHMFAKCWSLDDALAA 375
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F+ I K++ +WN LL +++ G EA +F+ M V
Sbjct: 376 FQRIPQKNLGSWNGLLGAYIHVGRLAEARKLFEVMEERDV 415
>gi|297746034|emb|CBI16090.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++V ++ D S N+ + + N A F M +++ +TFT VL A +
Sbjct: 168 NKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMI 227
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQ+HAL++K G S V+ L+ MY++ G + ++ F ++ DV++WN+LL
Sbjct: 228 STLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLL 287
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S HG +EA +F+ M R V+
Sbjct: 288 SGCAYHGYGREAVELFEQMRRSGVK 312
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T ++ + VL C + + G QVH L +K G VV T L+D+YSK + S F
Sbjct: 9 TPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMF 68
Query: 135 KEIEFKDVVTWNALLSSF 152
+ ++++TW ++++ +
Sbjct: 69 DLMPERNIITWTSMVAGY 86
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + ++ + S + Y + A L M + L T+ +L + S+
Sbjct: 67 MFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSND 126
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE----IEFKDVVTWNA 147
+ KQVH +I+ G +S ++ L+ +YS+ S+E F + + D ++WNA
Sbjct: 127 LDHCKQVHCRIIREGLESNSYLEVTLVTVYSECS--SSSLEDFNKVCSGVTRWDQISWNA 184
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ G + A F M + ++
Sbjct: 185 VIGGLSNLGNGEAALKCFSKMRQAGIDM 212
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 10 FPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
F + C+ A++L Y + ++ FD + +L S N+ + +Y ++ N L
Sbjct: 407 FSSVNCV--ANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALEL 464
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F + + +A+TF +L +++ +G+Q+HA +IK G V AL+ MYS+
Sbjct: 465 FNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSR 524
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G + + + F+++E ++V++W ++++ F +HG A +A +F M E V
Sbjct: 525 CGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGV 574
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 74/142 (52%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD+I ++ S + + Y + + LF M T + +TF+ L AC+ L
Sbjct: 330 KIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANL 389
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G+QV +K G S V +L+ MY++ G + ++ +AF + K+++++N ++
Sbjct: 390 AALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVI 449
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
++ ++ ++EA +F + +
Sbjct: 450 DAYAKNLNSEEALELFNEIEDQ 471
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA--- 133
+T + V+ AC+ + G+Q+H+ I+ G + V L++MY+K + G A
Sbjct: 272 FTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKI 331
Query: 134 FKEIEFKDVVTWNALLSSFL-RHGLAKEAFGVFQAMTRERV 173
F +I +V +W A+++ ++ + G +EA +F+ M V
Sbjct: 332 FDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHV 372
>gi|225433758|ref|XP_002267783.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 636
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
+ + P K +S + L RY+ + VF E+ D S NS + Y + +++
Sbjct: 314 IGSMPGKNVVS-WNMLIARYIRLGKIEDAKVVFQEMPERDAVSWNSMIAGYVQIKDYARA 372
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
ALF M + T T VLGAC+ A E G+++H + + E + AL+DM
Sbjct: 373 LALFREMEIANVEATDITLISVLGACAETGALEIGRKIHLSLKQREYKIEGYLSNALVDM 432
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y+K G L + E F E++ K + WNA++ S HG +EA +F M
Sbjct: 433 YAKCGHLNLAWEVFSELKMKHISCWNAMIVSLAVHGYCEEALRLFSTM 480
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGA 85
VY +F++ + + N+ + +Y +S FP L+ +MH + +T+ L A
Sbjct: 163 VYAQAIFEDTAMDNPFVCNTMIRAYAKSV-FPIKAIYLYNFMHRKDIKSDHFTYPFGLKA 221
Query: 86 C-------------SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
C + L +G ++H + + G D + ++ +L+ +YS+ G L +
Sbjct: 222 CARVLWCNEGDIKCTQLDIACKGAEIHCRLFRLGLDQDCFIQNSLVYLYSQCGFLDLARC 281
Query: 133 AFKEIEFKDVVTWNALLSSF 152
F E+ K + +WN ++S++
Sbjct: 282 VFDEMTEKTITSWNVMISAY 301
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+ + + ++ + Y+++ N + +F MH+ T +T VL ACS +
Sbjct: 276 HVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACSDVG 335
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GKQ H LM+K G + + VK+AL+DMY+K G +G++ E F + D+V W A+++
Sbjct: 336 TLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVT 395
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++G ++A ++ M +E V
Sbjct: 396 GHVQNGEFEQALMLYARMDKEGV 418
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA + F++ S D+ + + + ++ F L+ M +
Sbjct: 369 CGCIGDA--------KECFNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFP 420
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T T +L AC+ L A E GKQ+H ++K G V +AL MYSK G L + + F
Sbjct: 421 NTLTITSLLRACAGLAALEPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVF 480
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + +DV+ WN+++S F ++G +A +F+ M E
Sbjct: 481 RRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMKLE 517
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSALP 90
VFDE+ H + S + + Y + + LF M C L+ + T VL A S
Sbjct: 175 VFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPL 234
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G QVH L++K G V+ +L+ MY+K G + + F+ + ++ +TW+A+++
Sbjct: 235 GLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMIT 294
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++G A+ A +F M
Sbjct: 295 GYSQNGNAESAVRMFSQM 312
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 98 VHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
VHAL K + S V V TAL++MY K GL+ ++ F E+ ++ V+W A+++ +
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198
Query: 157 LAKEAFGVFQAMTRE 171
++EAF +F+ M E
Sbjct: 199 CSQEAFELFRQMLGE 213
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG--LLGESVEAFKEI--EFKDVVTWNA 147
P G+ +HA +K G+ S V +L+ YS + L + F +I +DV +WN+
Sbjct: 28 PRDGEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNS 87
Query: 148 LLSSFLRH 155
LL+ H
Sbjct: 88 LLNPLSHH 95
>gi|347954458|gb|AEP33729.1| chlororespiratory reduction 21, partial [Brassica rapa]
Length = 788
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI ++ + N+ + Y ++ L C M
Sbjct: 163 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMR 222
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GKQ HAL + G + + ++ T++++ Y K GL+
Sbjct: 223 EEGVEPTRVTVSTCLSASANMGGVEEGKQSHALAVVNGLELDNILGTSVLNFYCKVGLVE 282
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL ++A + + M E+++F
Sbjct: 283 YAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKF 329
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ V AC AL G+ VH + K G D V ++L DMY K G+L ++ + F E
Sbjct: 130 FVVPNVCKACGALQWRGFGRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDE 189
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I ++VV WNAL+ ++++G+ +EA + M E VE
Sbjct: 190 IPERNVVAWNALMVGYVQNGMNEEAIRLMCDMREEGVE 227
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T + ++ +
Sbjct: 283 YAEMVFDRMVGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSTAA 342
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ V+ + +DMY+K G + ++ + F KD++ WN
Sbjct: 343 RTQNSKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNT 402
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 403 LLAAYAESGLSGEALRLFYEMQLESV 428
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEA 133
++ T L AC+ L + G+ VH +I+ S V ++T+L+DMY+K G + ++ +
Sbjct: 501 NVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCGDISKAEKV 560
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F+ F ++ +NA++S++ +G +EA +++++
Sbjct: 561 FRRKLFSELPLYNAMISAYALYGNVEEAMALYRSL 595
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ +L C G+Q+HA ++K G ++T L+ Y+K L + F +
Sbjct: 29 YGEILQGCVYERDFHTGQQIHARILKNGDFYAKNEYIETKLVIFYAKCDALEIAEVLFSK 88
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ ++V +W A++ R GL + A F M ++ +
Sbjct: 89 LRVRNVFSWAAIIGVKCRMGLVEGALMGFVEMLKDEI 125
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ ++ ++ S N+ + + R LF M T +T++ VL AC++ +
Sbjct: 263 IFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGS 321
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA +IK G + L+DMY+K G + ++ + F+ + +D+V+WN+++S
Sbjct: 322 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 381
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HGL EA +F+ M + +V+
Sbjct: 382 YAQHGLGAEALQLFEQMLKAKVQ 404
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Query: 1 MLSFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
+L+FI N AK C S+ +A +FD++ D+ S + Y++S
Sbjct: 142 LLNFI--LNMYAK-CGSLEEA--------QDLFDKMPTKDMVSWTVLISGYSQSGQASEA 190
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
ALF M +T + +L A P+ G+Q+HA +K G D V ++L+DM
Sbjct: 191 LALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDM 250
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y+++ + E+ F + K+VV+WNAL++ R G + +F M R+ E
Sbjct: 251 YARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFE 304
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 52/90 (57%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
++ +L C+ L ++G+ +HA + + + V+ +++MY+K G L E+ + F ++
Sbjct: 108 YSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMP 167
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KD+V+W L+S + + G A EA +F M
Sbjct: 168 TKDMVSWTVLISGYSQSGQASEALALFPKM 197
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 76/145 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++V ++ D S N+ + + N A F M +++ +TFT VL A +
Sbjct: 338 NKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMI 397
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQ+HAL++K G S V+ L+ MY++ G + ++ F ++ DV++WN+LL
Sbjct: 398 STLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLL 457
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S HG +EA +F+ M R V+
Sbjct: 458 SGCAYHGYGREAVELFEQMRRSGVK 482
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D S NS + T + L + TA+ ++ +C+ + G Q+H
Sbjct: 43 DFFSCNSHIACDTDEKQSSVDLKLLAQLQQHGSAPTAHILNRMVSSCAKSGSVFVGIQLH 102
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ +IK G DS + +AL+DMY K G + + F E+ ++VVTWN+L+S +L G +
Sbjct: 103 STIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVGCPE 162
Query: 160 EAFGVFQAMTRERVE 174
A +F M + ++
Sbjct: 163 IAIELFLEMVKVGID 177
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDE+ H ++ + NS + Y LF M ++ T ++ + VL C +
Sbjct: 134 QRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRM 193
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G QVH L +K G VV T L+D+YSK + S F + ++++TW +++
Sbjct: 194 EDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMV 253
Query: 150 SSF 152
+ +
Sbjct: 254 AGY 256
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 64/148 (43%), Gaps = 6/148 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + ++ + S + Y + A L M + L T+ +L + S+
Sbjct: 237 MFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSND 296
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE----IEFKDVVTWNA 147
+ KQVH +I+ G +S ++ L+ +YS+ S+E F + + D ++WNA
Sbjct: 297 LDHCKQVHCRIIREGLESNSYLEVTLVTVYSECS--SSSLEDFNKVCSGVTRWDQISWNA 354
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ G + A F M + ++
Sbjct: 355 VIGGLSNLGNGEAALKCFSKMRQAGIDM 382
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + H + S + + Y ++ LF +M + +TF + AC+
Sbjct: 69 RVFDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGAR 128
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+HA KG + V++ALMDM+ + G +G++ F E+E KD+V+WN+L+
Sbjct: 129 CARSGEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMR 188
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F+ +A G+F +M R+
Sbjct: 189 GFVEREHCNDALGLFDSMLRD 209
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++D + DL S + + Y+ RN+ LFC +H L + A + +LG C+ +
Sbjct: 272 IYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKGLRIDAILLSSLLGVCANVA 331
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G Q+HA M K + + AL+DMY+K G +S AF E+ ++V++W +L++
Sbjct: 332 SIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSRRAFDEMPNRNVISWTSLIT 391
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
S +HG ++A +F M + V+
Sbjct: 392 SCAQHGFGEDAVTLFARMEEDGVK 415
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 69/158 (43%), Gaps = 9/158 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA ++F E+ DL S NS + + + LF M +
Sbjct: 162 CGSVGDA--------RRLFAEMERKDLVSWNSLMRGFVEREHCNDALGLFDSMLRDGMLP 213
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF L AC A+ + +HA +IK G E V +L+D Y+K L + +
Sbjct: 214 DHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVAIASLIDSYAKCRSLSSARVIY 273
Query: 135 KEIEFKDVVTWNALLSSF-LRHGLAKEAFGVFQAMTRE 171
+ D+V+ AL+S + + + +A +F + R+
Sbjct: 274 DSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRK 311
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 2/97 (2%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVEA 133
A ++ +L + A +GK VH I + S P + T L+ YS +G + +
Sbjct: 11 AALYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRV 70
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + + VV+W A++S + ++ +EA +F M R
Sbjct: 71 FDGMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLR 107
>gi|297734518|emb|CBI15765.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VF ++ D+ + NS + R+ F F M ++ + +TF V+ C+
Sbjct: 133 FAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCA 192
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + + VH LMI+ ++ +AL+D+YSK G + + + F I+ DV WN+
Sbjct: 193 RLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNS 252
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ HGLA +A GVF M E V
Sbjct: 253 MINGLAIHGLALDAIGVFSQMEMESV 278
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 4/127 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I H D+S NS + +F M ++ + TF +L ACS
Sbjct: 237 KVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCG 296
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
E+G++ LM + +P ++ A++D+ + GL+ E+ K + + D+V W A
Sbjct: 297 LVEQGRRYFDLM-RRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRA 355
Query: 148 LLSSFLR 154
LL R
Sbjct: 356 LLKMGFR 362
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S N+ + + R LF M + +++ + GACS+
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK G L+DMY+K G + ++ + F + +DVV+WN+LL++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ +HG KEA F+ M R
Sbjct: 338 YAQHGFGKEAVWWFEEMRR 356
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+++ D + + + Y++ F M + +T + V+ A +A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H +K G DS V +AL+D+Y++YGL+ ++ F +E ++ V+WNAL++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
R ++A +FQ M R+
Sbjct: 236 GHARRSGTEKALELFQGMLRD 256
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ +G+ VHA +++ + V+ L++MY+K G L E+ + F+++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+D VTW L+S + +H +A F M R
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA + FD + D+ S + Y ++ +L+ M +
Sbjct: 358 CSSIVDA--------RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T VL ACS+L A E+GKQ+HA +K G E + +AL MY+K G L + F
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVF 469
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + +DV++WNA++S ++G KEA +F+ M E
Sbjct: 470 RRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLE 506
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 85/159 (53%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DAL Q F+ S + + ++ + Y +S + LF MH + +
Sbjct: 257 CGSLDDAL--------QTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRP 308
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +TF V+ ACS L A GKQVH ++K G +S+ V TAL+DMY+K + ++ + F
Sbjct: 309 SEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGF 368
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ D+V W +++ ++++G ++A ++ M E +
Sbjct: 369 DYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGI 407
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 12 AKTCISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPA----TW 61
+ +C+ IA++L Y + VF+ I + D+ S N + Y S++ P+
Sbjct: 36 SSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGY--SQHGPSGSSHVM 93
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LF M + A+TF V A S L G+ HA+ IK + + V ++LM+MY
Sbjct: 94 ELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY 153
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
K GL E+ + F + ++ V+W ++S + LA EA G+F+ M RE
Sbjct: 154 CKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRRE 203
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + + S + + Y + LF M + FT VL SAL
Sbjct: 163 RKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVL---SAL 219
Query: 90 PAPE---RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
PE GKQ+H + +K G S V AL+ MY+K G L ++++ F+ K+ +TW+
Sbjct: 220 TLPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWS 279
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A+++ + + G + +A +F +M
Sbjct: 280 AMITGYAQSGDSDKALKLFSSM 301
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I+ D NS + S +++ LF M + + L AC+ LP
Sbjct: 417 RVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLP 476
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK++H LMIKG S+ +++L+DMY+K G L S F ++ ++ V+WN+++S
Sbjct: 477 ALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEVSWNSIIS 536
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ HG KE +F M R ++
Sbjct: 537 AYGNHGDLKECLALFHEMLRNGIQ 560
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T+ TF+ + A + L A GK++H +IK D + V +A++DMY+K G L + F
Sbjct: 360 TSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVF 419
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
I KD + WN++++S ++G EA +F+ M E +
Sbjct: 420 NRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRY 460
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD I D N L Y ++ + +F M + + + TF VL C++
Sbjct: 115 LFDNIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAM 174
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G Q+H + + G + + V L+ MYSK L + + F D+V+WN ++S
Sbjct: 175 LDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISG 234
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++++GL EA +F+ M ++
Sbjct: 235 YVQNGLMGEAEHLFRGMISAGIK 257
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
S+ DA K YT Q+ G S+ N + +T F + M ++
Sbjct: 7 SLKDA--KNLFYTLQL------GCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDK 58
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L + + GK VH + G + V ++L+ +Y++ G L ++ F
Sbjct: 59 YTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDN 118
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I KD V WN +L+ ++++G + A +F M ++
Sbjct: 119 IPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIK 156
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 8/148 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD DL S N + Y ++ LF M S + + TF L + L
Sbjct: 215 KLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELL 274
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK----DVVTWN 146
+ + K++H +I+ + +K+AL+D+Y K VE ++I + D V
Sbjct: 275 SLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKC----RDVEMAQKILCQSSSFDTVVCT 330
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S ++ +G KEA F+ + +ER++
Sbjct: 331 TMISGYVLNGKNKEALEAFRWLVQERMK 358
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
++ +VFD + + S NS + +Y + ALF M + TF ++ AC
Sbjct: 515 FSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACG 574
Query: 88 ALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTW 145
+ G + + LM + G + + DM+ + G L E+ E + F D W
Sbjct: 575 HAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVW 634
Query: 146 NALLSSFLRHG 156
LL + HG
Sbjct: 635 GTLLGACHIHG 645
>gi|255583218|ref|XP_002532374.1| basic helix-loop-helix-containing protein, putative [Ricinus
communis]
gi|223527930|gb|EEF30017.1| basic helix-loop-helix-containing protein, putative [Ricinus
communis]
Length = 310
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 80/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F ++ D+ S + + Y +++ F +F M T + T V+ AC+ L A
Sbjct: 129 LFSQMHERDIISWTTMVNCYAQNKKFGEALVVFNQMIKTGICPDEVTMATVISACAHLGA 188
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK++H +++ G D + + ++L+DMY+K G L S+ F +++ K++ WN+++
Sbjct: 189 LDLGKEIHLYVMQNGFDLDVYIGSSLIDMYAKCGSLDRSLLVFFKLQEKNLFCWNSVIEG 248
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG AKEA +F+ M RE+++
Sbjct: 249 LAAHGYAKEALEMFRKMGREKIK 271
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++YTF+ ++ AC + G+ VH + + G +S V+TAL+D YS G + ES + F
Sbjct: 9 SSYTFSSLIKACGLASEVKFGEVVHGHVWRHGLESHVFVQTALVDFYSTVGRIIESKKVF 68
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E+ +D+ W +++S R G A +F M
Sbjct: 69 DEMPERDIFAWATMVTSLARIGDMSSARRLFDMM 102
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRN 56
F+ + F + +I +L YV + FD+I + S +S + Y +
Sbjct: 605 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 664
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
F LF + + ++ + ++G + +GKQ+ AL +K + E V +
Sbjct: 665 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 724
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++DMY K GL+ E+ + F E++ KDV++W +++ + +HGL K++ +F M R +E
Sbjct: 725 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 782
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VFD + ++ S ++ + + + + + +LF M + +TF+ L AC L
Sbjct: 432 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 491
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+G Q+H +K G + V +L+DMYSK G + E+ + F+ I + +++WNA++
Sbjct: 492 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 551
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ G +A F M ++
Sbjct: 552 AGFVHAGYGSKALDTFGMMQEANIK 576
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T T +L ACS+ GKQ+H +++ G S + +L+D+Y K G L + +AF
Sbjct: 582 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 641
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+I+ K +++W++L+ + + G EA G+F+ +
Sbjct: 642 DQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 675
>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 580
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 78/145 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FDE+ D +S ++ + Y ++ LF M + ++ A+T V+G C
Sbjct: 160 YACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCG 219
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A + GK VH+ M K G + V+ TAL+ MYSK G L +++ F+ + +DV W+
Sbjct: 220 DLGALDLGKWVHSYMDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWST 279
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRER 172
+++ + HG ++A +F AM R +
Sbjct: 280 MIAGYAIHGHGEKALQLFDAMKRSK 304
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 8 TNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T +K S A L Y H++F H +L N+ + Y+ S + AL+ M
Sbjct: 39 TFLTSKLIESSAVTLSGHVAYAHRIFSCTHHPNLFMWNTIIRGYSISDSPITAIALYRDM 98
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
++ +YTF VL AC L G+++H+ ++K G D E + L+ +Y+ G +
Sbjct: 99 FLCGISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCM 158
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F E+ D +W+ ++S + ++G A EA +F+ M E V
Sbjct: 159 DYACVMFDEMPEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENV 204
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ +AL +VF ++ D+++ ++ + Y + LF M +
Sbjct: 256 CGSLDNAL--------KVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRSKTIP 307
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TFT VL ACS E+G Q+ M P +K ++D++ + G++G + +
Sbjct: 308 NCVTFTSVLSACSHSGLVEKGHQIFETMWT-EYKITPQIKHYGCMVDLFCRAGMVGHAHK 366
Query: 133 AFKEIEFK-DVVTWNALLSSFLRHG 156
+ + + +VV W LL + HG
Sbjct: 367 FIQTMPIEPNVVLWRTLLGACKTHG 391
>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
Length = 624
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + + R + + F M T +T++ V + + L A
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGA 268
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA +IK V L+DMY+K G + ++ + F ++ KD+VTWN++L++
Sbjct: 269 LEQGKWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTA 328
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
F ++GL KEA F+ M + V
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGV 350
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA VFD++ D+ S S + Y ++ L M
Sbjct: 99 CRSVLDA--------RNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKP 150
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF +L A A G+Q+HAL +K G + V +AL+DMY++ G + + F
Sbjct: 151 NGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVF 210
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ K+ V+WNAL+S F R G + A F M R E
Sbjct: 211 DKLDSKNGVSWNALISGFARKGDGESALMTFAEMLRNGFE 250
Score = 42.7 bits (99), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 48/98 (48%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T + + AC+ E +++HA + + + +L+ MY K + ++ F
Sbjct: 50 TPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCKCRSVLDARNVF 109
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
++ KD+V+W +L++ + ++ + EA G+ M + R
Sbjct: 110 DQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGR 147
Score = 37.0 bits (84), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 68/157 (43%), Gaps = 6/157 (3%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
++T F T + + A + +VFD + + DL + NS L ++ + + F
Sbjct: 285 KLTAFVGNTLLDMY-AKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFE 343
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSK 123
M + + L TF +L ACS + GK+ +M + D EP + ++ + +
Sbjct: 344 EMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKE--YDLEPEIDHYVTVVALLGR 401
Query: 124 YGLLGES-VEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
GLL + V FK W ALL++ H AK
Sbjct: 402 AGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438
>gi|347954456|gb|AEP33728.1| chlororespiratory reduction 21, partial [Brassica oleracea]
Length = 643
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI ++ + N+ + Y ++ L C M
Sbjct: 18 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMR 77
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GK HAL + G + + ++ T++++ Y K GL+
Sbjct: 78 EEGVEPTRVTVSTCLSASANMGGVEEGKXSHALAVVNGLELDNILGTSILNFYCKVGLID 137
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL ++A + Q M E+++F
Sbjct: 138 YAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKF 184
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+ VH + K G D V ++L DMY K G+L ++ + F EI ++VV WNAL+ +++
Sbjct: 3 GRGVHGYVAKSGLDDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQ 62
Query: 155 HGLAKEAFGVFQAMTRERVE 174
+G+ +EA + M E VE
Sbjct: 63 NGMNEEAIRLMCDMREEGVE 82
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T + ++ +
Sbjct: 138 YAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCQLMRLEKLKFDCVTLSTLMSTAA 197
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ V+ +A +DMY+K G + ++ + F KD++ WN
Sbjct: 198 RTQNSKLGKEVQCYCIRHSFESDIVLASAAVDMYAKCGSIVDAKKVFDSTVQKDLILWNT 257
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 258 LLAAYAESGLSGEALRLFYEMQLESV 283
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + + ++ T L AC+ L + G+ VH +I+ S V ++T+L+DMY+K G
Sbjct: 348 MQESGMRPNVFSITVALSACANLASLHFGRSVHGYIIRNRLHSSSVSIETSLVDMYAKCG 407
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ + F+ F ++ +NA++S++ +G +EA ++ ++
Sbjct: 408 DISKAEKVFRRKLFSELPLYNAMISAYALYGNVEEAMALYGSL 450
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+ + + ++ + Y ++ + ++F MH+ T +TF VL A S L
Sbjct: 170 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 229
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQ H LM+K G + + VK+AL+DMY+K G + ++ E F ++ D+V W A++S
Sbjct: 230 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 289
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++G +EA ++ M +E +
Sbjct: 290 GHVQNGEHEEALTLYARMDKEGI 312
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C IADA + FD++ D+ + + + ++ L+ M +
Sbjct: 263 CGCIADA--------KEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIP 314
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T L AC+ + A E GKQ+H ++K G V +AL MYSK G L + + F
Sbjct: 315 SKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVF 374
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ I +DV+ WN+++S F ++G A +F+ M E
Sbjct: 375 RRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKME 411
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN-LTAYTFTPVLGACSAL 89
+VFD + + S ++ + Y + + LF M C + + + T VL A S
Sbjct: 68 RVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVP 127
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+Q+H L++K G V+ +L+ MY+K G +G + F+ ++ +TW+A++
Sbjct: 128 LGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMI 187
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + ++G A A +F M
Sbjct: 188 TGYAQNGEADSAVSMFSQM 206
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 35/59 (59%)
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V T+L++MY K G++ ++ F + ++ +W+ +++ + ++EAF +F+ M E
Sbjct: 49 VCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 107
>gi|293335139|ref|NP_001169604.1| uncharacterized protein LOC100383485 [Zea mays]
gi|224030331|gb|ACN34241.1| unknown [Zea mays]
Length = 381
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 79/134 (58%), Gaps = 2/134 (1%)
Query: 40 DLSSLNSQLFSYTRSRNF-PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV 98
D S NS + Y + N A ++ +HS + + TF+ +L AC+++ A ERG ++
Sbjct: 162 DAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQI-MDCCTFSIILNACASVAALERGMEL 220
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
HA I+ +S+ VV++AL+DMYSK G + + + F + ++ +WN+++ + RHGL
Sbjct: 221 HAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQRNEFSWNSMIYGYARHGLG 280
Query: 159 KEAFGVFQAMTRER 172
++A +F+ M R R
Sbjct: 281 RKAIEIFEEMLRSR 294
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M +C++ + + L +C+ L G+QVH +K G D + V L+ MY + G
Sbjct: 1 MRQSCISPSNFAVISSLSSCAGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGA 60
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGL-AKEAFGVFQAMTR 170
+ + + F + D V+WN ++ E VF M R
Sbjct: 61 MSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISEIVKVFNNMMR 105
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S N+ + + R LF M + +++ + GACS+
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK G L+DMY+K G + ++ + F + +DVV+WN+LL++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ +HG KEA F+ M R
Sbjct: 338 YAQHGFGKEAVWWFEEMRR 356
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+++ D + + + Y++ F M + +T + V+ A +A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H +K G DS V +AL+D+Y++YGL+ ++ F +E ++ V+WNAL++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
R ++A +FQ M R+
Sbjct: 236 GHARRSGTEKALELFQGMLRD 256
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ +G+ VHA +++ + V+ L++MY+K G L E+ + F+++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+D VTW L+S + +H +A F M R
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
>gi|356571125|ref|XP_003553731.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g05240-like [Glycine max]
Length = 552
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ ++ S NS + +Y + LF M ++ + TF VL C+ L
Sbjct: 257 DLFNKMPQRNIVSWNSMINAYNQYERHKEALDLFFDMWTSGIYPDKATFLSVLSVCAHLC 316
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+ VHA + K G ++ + TAL+DMY+K G LG + + F ++ +DVV W ++++
Sbjct: 317 ALALGQTVHAYLXKTGIGTDISLATALLDMYAKTGGLGSAQKIFSSLQKRDVVMWTSMIN 376
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
HG EA G+FQ M +
Sbjct: 377 GLAMHGDGNEALGMFQTMHED 397
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +I + NS + + + N + L+ + + +TF VL AC A+
Sbjct: 49 VFRQIDAPSVYIWNSMIRGFVNNHNPRMSMLLYRQLIENGYSPDHFTFPFVLKACCAIAD 108
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK +H ++K G +++ T L+ MY + ++ F I +VV W L++
Sbjct: 109 QDCGKCIHCCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPIWNVVAWTCLIAG 168
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++ + EA VF+ M+ VE
Sbjct: 169 YVNNNQPYEALKVFKDMSHCGVE 191
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD I ++ + + Y + +F M + T L C+
Sbjct: 149 KVFDNIPIWNVVAWTCLIAGYVNNNQPYEALKVFKDMSHCGVEPNEITMVNALIXCARSR 208
Query: 91 APERGKQVHALMIKGGTD-------SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+ G+ VH + K G D S ++ TA+++MY+K G + + F ++ +++V
Sbjct: 209 DFDTGQWVHQHIRKAGYDPFMSTSNSNIILATAILEMYAKCGSFKIARDLFNKMPQRNIV 268
Query: 144 TWNALLSSFLRHGLAKEAFGVF 165
+WN++++++ ++ KEA +F
Sbjct: 269 SWNSMINAYNQYERHKEALDLF 290
>gi|147781801|emb|CAN65443.1| hypothetical protein VITISV_011420 [Vitis vinifera]
Length = 485
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 77/144 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ I D+ S S L +S F + ALF M + T VL AC+
Sbjct: 66 QEVFNRIREKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIEPDEITLVGVLSACAQT 125
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A ++GK +H L+ K + + V++TAL+DMY+K G + +++ F+ + ++V TWNA++
Sbjct: 126 GALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNAMI 185
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
HG ++A +F M +++
Sbjct: 186 GGLAMHGHGEDAISLFDQMEXDKL 209
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T ++ AC+ L ERGK +H+ + G D V A++DMY K + + E F I
Sbjct: 13 TMVSLVPACAQLGNLERGKLLHSYSKELGLDENLSVNNAILDMYCKCDDIESAQEVFNRI 72
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDV++W ++LS + G +E+ +F+ M ++E
Sbjct: 73 REKDVLSWTSMLSGLAKSGYFQESLALFRKMQLHKIE 109
>gi|410110033|gb|AFV61096.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
rhodocnemis]
Length = 364
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 88/166 (53%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNSRNVXXAFEIFERINDKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + +AL+ MYSK G++ +
Sbjct: 255 DHLVTDQYTFAAVLRSCSDLATLQLGRQIHVLVVKSGFEGNEYXASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 315 AWESFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERSIKL 360
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SDGYRDLVTWNSMLAAYLEHNLEECGFNIFLEMVRQRLEMDAYTLSSVISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + + E F+ I KD+V+WN
Sbjct: 171 DTQQSLGKSLHGFVIKKGLDQVTQISNALVSMYLKSNSRNVXXAFEIFERINDKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 231 TILTGLSQNGLSENALRLFQNI 252
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y + LF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGDLERCVTLFVGMEMEGVTVDDATFAPLL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 64 TLLYDAELYDLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKRVFDSSDGYRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 124 VTWNSMLAAYLEHNLEECGFNIFLEMVRQRLE 155
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA + FD + D+ S + Y ++ +L+ M +
Sbjct: 358 CSSIVDA--------RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILP 409
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T VL ACS+L A E+GKQ+HA +K G E + +AL MY+K G L + F
Sbjct: 410 NELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVF 469
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + +DV++WNA++S ++G KEA +F+ M E
Sbjct: 470 RRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLE 506
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DAL Q F+ S + + ++ + +S + LF MH + +
Sbjct: 257 CGSLDDAL--------QTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRP 308
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +TF V+ ACS L A GKQVH ++K G +S+ V TAL+DMY+K + ++ + F
Sbjct: 309 SEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGF 368
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ D+V W +++ ++++G ++A ++ M E +
Sbjct: 369 DYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGI 407
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 84/171 (49%), Gaps = 12/171 (7%)
Query: 12 AKTCISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPA----TW 61
+ +C+ IA++L Y + VF+ I + D+ S N + Y S++ P+
Sbjct: 36 SSSCVYIANSLVNLYAKCQRLREAKFVFERIQNKDVVSWNCIINGY--SQHGPSGSSHVM 93
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LF M + A+TF V A S L G+ HA+ IK + + V ++LM+MY
Sbjct: 94 ELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIKMDSCRDVFVGSSLMNMY 153
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
K GL E+ + F + ++ V+W ++S + LA EA G+F+ M RE
Sbjct: 154 CKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREE 204
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 6/141 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + S + + Y + LF M + FT VL SAL
Sbjct: 164 KVFDTMPERNSVSWATMISGYASQKLAAEALGLFRLMRREEEGENEFVFTSVL---SALT 220
Query: 91 APE---RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
PE GKQ+H + +K G S V AL+ MY+K G L ++++ F+ K+ +TW+A
Sbjct: 221 LPELVNNGKQIHCIAVKNGLLSIVSVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSA 280
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+++ + G + +A +F +M
Sbjct: 281 MITGXAQSGDSDKALKLFSSM 301
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 78/139 (56%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +F+ ++ N L +Y + + ++ +F M +T ++ +T+ +L C+
Sbjct: 300 HDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCT 359
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+Q+H+L IK G +S+ V L+DMYSKY L ++ + + +E +DVV+W +++
Sbjct: 360 GQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMI 419
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ +++H +EA F+ M
Sbjct: 420 AGYVQHDFCEEALATFKEM 438
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F EI H D + N + + +SR + +F M +TF + A + L
Sbjct: 504 LFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLAD 563
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++GKQVH +K G SE V AL+ +Y K G + ++ F E+ ++ V+WN +++S
Sbjct: 564 IKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITS 623
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+HG EA +F M +E
Sbjct: 624 CSQHGRGLEALDLFDQMKQE 643
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ + + D+ S S + Y + A F M + AC+ +
Sbjct: 402 KILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIK 461
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G Q+HA + G ++ + L+++Y++ G E+ F+EI+ KD +TWN L+S
Sbjct: 462 AMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLIS 521
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
F + L ++A VF M++ ++
Sbjct: 522 GFGQSRLYEQALMVFMKMSQAGAKY 546
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF E+S D S + L Y + + L+ MH T + T Y + VL AC+
Sbjct: 99 QVFKELSSRDHVSWVAMLSGYAQRGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGK 158
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+G+ +HA + K SE V AL+ +Y +G + F ++ F D VT+N L+S
Sbjct: 159 LFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLIS 218
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G + A +F M
Sbjct: 219 GHAQCGHGECALQIFDEM 236
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA + G ++ ++ L+D+Y+K GL+ ++ + FKE+ +D V+W A+LS + + G
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 157 LAKEAFGVFQAM 168
L KEAF ++ M
Sbjct: 124 LGKEAFRLYSQM 135
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 3/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ D + N+ + + + + +F M + L T +L AC+++
Sbjct: 200 RVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVG 259
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++GKQ+H+ ++K G + + + +L+D+Y K G + + + F + +VV WN +L
Sbjct: 260 DLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLV 319
Query: 151 SFLR-HGLAK--EAFGVFQA 167
++ + LAK E FG QA
Sbjct: 320 AYGQISDLAKSFEIFGQMQA 339
>gi|302817750|ref|XP_002990550.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
gi|300141718|gb|EFJ08427.1| hypothetical protein SELMODRAFT_327 [Selaginella moellendorffii]
Length = 917
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 3/134 (2%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
+L S N+ +Y + + LF M L +F VL CS+ G ++H
Sbjct: 569 NLVSWNTIAAAYVQRDKWREALQLFQEMQLEGLKADKVSFVTVLNGCSS---ASEGSKIH 625
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++++ G +S+ +V TAL++MY+ L E+ F +EF+D+V+WNA+++ HGL++
Sbjct: 626 NILLETGMESDHIVSTALLNMYTASKSLDEASRIFSRMEFRDIVSWNAMIAGKAEHGLSR 685
Query: 160 EAFGVFQAMTRERV 173
EA +FQ M E V
Sbjct: 686 EAIQMFQRMQLEGV 699
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 75/138 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+++ D+ S S + +Y + LF M + + T+ + AC+ +
Sbjct: 159 RVFDKLALQDVVSWTSMIMTYVQHDRCVEALELFHRMRPSGVLPNRITYATAISACAHVE 218
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H+ +++ G +S+ VV A+++MY K G L ++ E F+ + + V+WNA+++
Sbjct: 219 SMADGKLIHSQVLEDGFESDVVVSCAIVNMYGKCGSLEDAREVFERMPHPNTVSWNAIVA 278
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +HG EA FQ M
Sbjct: 279 ACTQHGCCVEALWYFQRM 296
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + H S NS L ++ R F + +F M L TF VL C+A
Sbjct: 59 VFQSLDHPSQVSWNSLLAAFARDGQFQQAFQIFQRMKLQGLAPDRITFVTVLDGCTATGD 118
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
RGK +H +++ G + +V T+L+ MY K G + ++ F ++ +DVV+W +++ +
Sbjct: 119 LSRGKLLHGFVLEAGLERNVMVGTSLIKMYGKCGCVEDARRVFDKLALQDVVSWTSMIMT 178
Query: 152 FLRHGLAKEAFGVFQAM 168
+++H EA +F M
Sbjct: 179 YVQHDRCVEALELFHRM 195
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++ D+ S + SY + + M L +T L AC++L A
Sbjct: 461 LFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLEGLMGNDFTLVTALNACASLTA 520
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +H+ I+ G + P V AL++MY+K G L E+ F + K++V+WN + ++
Sbjct: 521 LSEGKLIHSHAIERGFAASPAVGNALINMYAKCGCLEEADLVFHQCG-KNLVSWNTIAAA 579
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+++ +EA +FQ M E
Sbjct: 580 YVQRDKWREALQLFQEMQLE 599
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + +TF ++ + + + K + LM++ G + + + +AL++M+S
Sbjct: 394 LFRRMLAEGITPDKFTFISIIDGTARM---QEAKILSELMVESGVELDVFLVSALINMHS 450
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+YG + E+ F +++ +D+V W +++SS+++HG + +A G + M E
Sbjct: 451 RYGNVREARSLFDDMKDRDIVMWTSIISSYVQHGSSDDALGCTRLMRLE 499
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 4/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D+ S N+ + +F M + +F VL A S
Sbjct: 658 RIFSRMEFRDIVSWNAMIAGKAEHGLSREAIQMFQRMQLEGVAPDKISFVTVLNAFSG-S 716
Query: 91 APERGKQ---VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+P KQ V L+ G +++ +V A++ M+ + G L E+ AF+ I +D +WN
Sbjct: 717 SPSSLKQARLVEKLISDQGYETDTIVGNAIVSMFGRSGRLAEARRAFERIRERDAASWNV 776
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++++ +HG ++A +F+ M +E
Sbjct: 777 IVTAHAQHGEVEQALKLFRRMQQE 800
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF +L ACS+ G+ ++ +++ G D+ +V +M MYS G + + F +
Sbjct: 308 TFITILNACSSPATLTFGELLYECILQCGYDTHLIVGNCIMTMYSSCGRIDNAAAFFSTM 367
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+D ++WN ++S + G EA +F+ M E +
Sbjct: 368 VERDAISWNTIISGHAQAGFCDEAVHLFRRMLAEGI 403
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF +LG C+ A G+ VH+ + + +V+ A + MY K G + ++V F+ +
Sbjct: 4 TFLALLGLCAKKSAIAEGRFVHSRVEASEFRRDDLVQNATIHMYGKCGCVEDAVTVFQSL 63
Query: 138 EFKDVVTWNALLSSFLRHG 156
+ V+WN+LL++F R G
Sbjct: 64 DHPSQVSWNSLLAAFARDG 82
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 78/150 (52%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R+ Y ++ DE S D+ S +S L Y ++ +F M + +TF VL
Sbjct: 30 RRFGYARKLVDESSELDVVSWSSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVL 89
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS G++VH + + G +S+ V L+ MY+K GLL +S F I ++VV
Sbjct: 90 KACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERNVV 149
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+WNAL S +++ L EA G+F+ M R +
Sbjct: 150 SWNALFSCYVQSELCGEAVGLFKEMVRSGI 179
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 78/143 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E + DL + S + +Y++ + L+ M + + + +L AC+ L
Sbjct: 441 KIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLS 500
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+H IK G + +L++MY+K G + ++ AF EI + +V+W+A++
Sbjct: 501 AYEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIG 560
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HG KEA +F M R+ V
Sbjct: 561 GYAQHGHGKEALRLFNQMLRDGV 583
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +I+H D+ S N+ + L M + +T + L AC+A+
Sbjct: 240 VFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGF 299
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+Q+H+ +IK S+ L+DMYSK ++ ++ A+ + KD++ WNAL+S
Sbjct: 300 KELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISG 359
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+ + G +A +F M E ++F
Sbjct: 360 YSQCGDHLDAVSLFSKMFSEDIDF 383
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 71/140 (50%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++F I ++ S N+ Y +S LF M + + ++ + +L AC+
Sbjct: 136 SRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAG 195
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + G+++H LM+K G D + AL+DMYSK G + +V F++I DVV+WNA+
Sbjct: 196 LQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAI 255
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
++ + H A + M
Sbjct: 256 IAGCVLHDCNDLALMLLDEM 275
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 78/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ +D + D+ + N+ + Y++ + +LF M S ++ T + VL + ++L
Sbjct: 340 RAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQ 399
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + KQ+H + IK G S+ V +L+D Y K + E+ + F+E ++D+V + ++++
Sbjct: 400 AIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMIT 459
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ ++G +EA ++ M ++
Sbjct: 460 AYSQYGDGEEALKLYLQMQDADIK 483
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA +IK G +P ++ L+ +YSK G + + E DVV+W++LLS ++++G
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 157 LAKEAFGVFQAM 168
+EA VF M
Sbjct: 62 FVEEALLVFNEM 73
>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Vitis vinifera]
Length = 611
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 79/150 (52%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + ++F E H + + N+ + + + + LF M + T T++ L
Sbjct: 188 RMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 247
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++L A E G Q+H+L +K D + VV AL+DMY+K G + ++ F + +D V+
Sbjct: 248 ACASLAALEPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLMNKQDEVS 307
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WNA++S + HGL +EA +F M V+
Sbjct: 308 WNAMISGYSMHGLGREALRIFDKMQETEVK 337
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ + S + + Y S F LF +H L +TF VL AC+ +
Sbjct: 94 KLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREVLP-NQFTFASVLQACATME 152
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H +IK G S+ V ALMD+Y+K G + S+E F E ++ VTWN ++
Sbjct: 153 GLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIV 212
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ G ++A +F M RV+
Sbjct: 213 GHVQLGDGEKALRLFLNMLEYRVQ 236
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA VFD ++ D S N+ + Y+ +F M T +
Sbjct: 287 CGSIKDA--------RLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKP 338
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TF VL AC+ ++G+ MI+ EP ++ T ++ + + G L ++V+
Sbjct: 339 DKLTFVGVLSACANAGLLDQGQAYFTSMIQ-DHGIEPCIEHYTCMVWLLGRGGHLDKAVK 397
Query: 133 AFKEIEFK-DVVTWNALLSSFLRH 155
EI F+ V+ W ALL + + H
Sbjct: 398 LIDEIPFQPSVMVWRALLGACVIH 421
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
H + ++ + L C P RGK +H ++K G + L++MY K L
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ + F E+ ++ +++ L+ + EA +F + RE
Sbjct: 90 CDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE 133
>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
Length = 673
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 8/161 (4%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ADA VF+ I DL++ N+ + +Y+R+ + M +
Sbjct: 168 CGSVADA--------RAVFEGICGRDLAAWNAMVAAYSRNGQMAQAVLVLRRMAVEGVRP 219
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF +L C + A + + +HA ++ G +S P V T L+ MY + G LG +V AF
Sbjct: 220 GEGTFVGMLSWCCTVGALDEARSIHAHILATGLESRPTVGTTLVSMYGRCGSLGGAVCAF 279
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ I KD+V WNA+++++ + G ++++ ++ M E V
Sbjct: 280 QRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMDLEGVRV 320
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 74/136 (54%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F I D+ + N+ + +Y +S + + ++ M + + T VL ACS+L
Sbjct: 279 FQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMDLEGVRVDKVTLIGVLDACSSLALT 338
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ + VHA ++ G + + V+ TAL++ Y++ G L ++ F E+E ++V TW+A+++++
Sbjct: 339 SKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLVDADLVFAEMEERNVATWSAMVAAY 398
Query: 153 LRHGLAKEAFGVFQAM 168
+ G + +++ M
Sbjct: 399 AQTGHPDRSLEMYREM 414
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 61/120 (50%), Gaps = 8/120 (6%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS--------EPVV 113
AL+ M + A T VLGAC+ L + G+++H + GG + V+
Sbjct: 98 ALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREIHRSHVLGGRSRPYERPMPVDAVM 157
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
TAL+ MY + G + ++ F+ I +D+ WNA+++++ R+G +A V + M E V
Sbjct: 158 ATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVAAYSRNGQMAQAVLVLRRMAVEGV 217
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + L +T + ++ C+ + E G+ +HA +++ G E + +L++MY K
Sbjct: 1 MDHSRLPITVPLYESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDS 60
Query: 127 LGESVEAFKEIEFKDVV-TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L ++ F+ + + + WN L+++ + G ++E+ +++ M+ E V+
Sbjct: 61 LRDATAVFELVARERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVK 109
>gi|297799466|ref|XP_002867617.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
lyrata]
gi|297313453|gb|EFH43876.1| hypothetical protein ARALYDRAFT_354257 [Arabidopsis lyrata subsp.
lyrata]
Length = 758
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 30 HQVFDEISHGDLS--SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
H+VFD +S + S + NS + Y + AL+ M + +TF VL AC
Sbjct: 378 HEVFDRMSKRESSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 437
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + + G+ +H ++K G + V AL+DMY+K G + ++ F I KD V+WN+
Sbjct: 438 GIGSVQIGEAIHRDLVKAGFGYDVHVLNALVDMYAKCGDIVKARNVFDMIPNKDYVSWNS 497
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L+ +L HGL EA +F+ M + ++
Sbjct: 498 MLTGYLHHGLLHEALDIFRLMVQNGID 524
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V VFD I + D S NS L Y +F M ++ + VL
Sbjct: 478 VKARNVFDMIPNKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIDPDKVAISSVLARV 537
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + G+Q+H +I+ G + E V AL+ +YSK G LG++ F ++ +D V+WN
Sbjct: 538 LSF---KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 594
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++S+ H F F+ M
Sbjct: 595 AIISA---HSRDSNGFKYFEQM 613
>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Vitis vinifera]
Length = 703
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFD+I D + ++ + Y R LF M + + VL C++L
Sbjct: 284 RQVFDQIREKDDGTWSAMIKVYERKGFEVEALNLFALMQREGVQSNFPSLISVLSVCASL 343
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ + G+QVHA ++K DS+ V + L+ MY K G L ++ + F KD+V WN+++
Sbjct: 344 ASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMWNSII 403
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + +HGL +EA VF M
Sbjct: 404 TGYAQHGLVEEALQVFHEM 422
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 4/132 (3%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V Q+FD S D+ NS + Y + +F M S+ + TF VL AC
Sbjct: 382 VKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSAC 441
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVV 143
S + G ++ M K EP + ++D+ + GL+ ++++ +++ + D +
Sbjct: 442 SYTGKVKEGLEIFESM-KSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAI 500
Query: 144 TWNALLSSFLRH 155
W ALL + H
Sbjct: 501 IWGALLGACRTH 512
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
L+ Y K ++ E+ +AF + ++VV+W A++ +++ GL EA +F M + V
Sbjct: 82 NGLISGYVKNRMVSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQMPEKNV 140
>gi|410110041|gb|AFV61100.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
turbinata]
Length = 391
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 198 ISNALVSMYLKSNSRNVEDAFEIFEHINDKDLVSWNTILTGLSQNGLSENALRLFQNIHL 257
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++
Sbjct: 258 DHLVTDQYTFAAVLXSCSDLATLQLGRQIHVLVVKSGFEDNEYVASALIFMYSKCGIIEY 317
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 318 AWEXFESSLKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERSIKL 363
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 115 RVFDS-SDGYRDLVTWNSMLAAYLEHSLEECGFNIFLEMVRQRLEMDAYTLSSVISACFE 173
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++ E F+ I KD+V+WN
Sbjct: 174 DTKQSLGKSLHGFVIKKGLDQVTQISNALVSMYLKSNSRNVEDAFEIFEHINDKDLVSWN 233
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 234 TILTGLSQNGLSENALRLFQ 253
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 7 RRVEDANKVFKYMGERNAVSWNALIGGYAEMGNLZRCITLFVGMEMEGVRVDDATFAPLL 66
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ +Q+H ++K G + E V A + Y++ G + ++ F + ++D+
Sbjct: 67 TLLYDAELYDLTRQLHGKJMKRGLEYENTVLNATITAYAECGCIEDAKRVFDSSDGYRDL 126
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 127 VTWNSMLAAYLEHSLEECGFNIFLEMVRQRLE 158
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 32 VFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTA--YTFTPV 82
+FDEI+ D+ S NS + ++ +S N LF M H N + + +
Sbjct: 219 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 278
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC +L A + K+VH I+ GT + V AL+D Y+K GL+ +V+ F +EFKDV
Sbjct: 279 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 338
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WNA+++ + + G + AF +F+ M +E +
Sbjct: 339 VSWNAMVAGYSQSGNFEAAFELFKNMRKENI 369
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 47/188 (25%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV-------- 82
+VF+ + D+ S N+ + Y++S NF A + LF M + L T+T V
Sbjct: 328 KVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRG 387
Query: 83 ---------------------------LGACSALPAPERGKQVHALMIK----------G 105
L AC++L A +G ++HA +K G
Sbjct: 388 CSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFG 447
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSFLRHGLAKEAFG 163
G D + +V AL+DMYSK + F +I E ++VVTW ++ ++G + +A
Sbjct: 448 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 507
Query: 164 VFQAMTRE 171
+F M E
Sbjct: 508 LFVEMISE 515
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESVE 132
AYT + +L AC+ L A GKQ+HA +++ S V L+DMYSK G + +
Sbjct: 522 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 581
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + K ++W ++++ + HG EA +F M +
Sbjct: 582 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK 619
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T VL AC LP+ G H L+ G +S + AL+ MYS+ G L E+ F E
Sbjct: 163 FTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDE 222
Query: 137 IE---FKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
I DV++WN+++S+ ++ A A +F MT
Sbjct: 223 ITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 258
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+S D S +S + Y + + +F M + + VL ACS +
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIG 308
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A ++G+ VHA + + + V+ TAL+DMY+K G L E F+E++ +++ TWNA++
Sbjct: 309 AIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIG 368
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
HG A++A +F + R++
Sbjct: 369 GLAIHGRAEDALELFSKLQEGRMK 392
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T+ + ACS A + G+Q+H ++K G S+ +K+A + MY+ +G L ++ + F
Sbjct: 131 NKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMF 190
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E DVV WN ++ +L+ G+ + A G+F M
Sbjct: 191 YSGE-SDVVCWNTMIDGYLKCGVLEAAKGLFAQM 223
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+++ +K G LG++ + F E+ +D ++W++++ ++ G KEA +FQ M RE
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQRE 288
>gi|225468012|ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 602
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 72/127 (56%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + Y+++ LF M + LN T +T T +L AC +L ++G+QVH+L+ K
Sbjct: 273 NSMISGYSQNLFGEEALKLFVEMRNNGLNPTDHTLTSILNACGSLTILQQGRQVHSLVAK 332
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G++S V +AL+DMYSK G + E+ F + K+ V W ++++ + + G E G+
Sbjct: 333 MGSESNVFVVSALLDMYSKCGSIDEARCVFDQAVEKNTVLWTSMITGYAQSGRGPEGLGL 392
Query: 165 FQAMTRE 171
F+ + E
Sbjct: 393 FERLVTE 399
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 59/111 (53%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M+++ T + L +C+ L G Q+HA +I+ G + + +AL+D+Y+K
Sbjct: 89 FWRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAK 148
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ F +E D V+W +++S F ++G KEA F+ M +++
Sbjct: 149 CDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIK 199
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +I DA +VFD + D S S + ++++ F M + +
Sbjct: 149 CDAIVDA--------KRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKP 200
Query: 75 TAYTFTPVLGACSALPAP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T+ V+ AC+ L ++ +HA ++K G + V + L+D YSK G + ++V
Sbjct: 201 NCVTYVSVISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLL 260
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F +D + +N+++S + ++ +EA +F M
Sbjct: 261 FGTTIERDNILFNSMISGYSQNLFGEEALKLFVEM 295
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 32 VFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTA--YTFTPV 82
+FDEI+ D+ S NS + ++ +S N LF M H N + + +
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC +L A + K+VH I+ GT + V AL+D Y+K GL+ +V+ F +EFKDV
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDV 331
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WNA+++ + + G + AF +F+ M +E +
Sbjct: 332 VSWNAMVAGYSQSGNFEAAFELFKNMRKENI 362
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 47/188 (25%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV-------- 82
+VF+ + D+ S N+ + Y++S NF A + LF M + L T+T V
Sbjct: 321 KVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRG 380
Query: 83 ---------------------------LGACSALPAPERGKQVHALMIK----------G 105
L AC++L A +G ++HA +K G
Sbjct: 381 CSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFG 440
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSFLRHGLAKEAFG 163
G D + +V AL+DMYSK + F +I E ++VVTW ++ ++G + +A
Sbjct: 441 GEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALK 500
Query: 164 VFQAMTRE 171
+F M E
Sbjct: 501 LFVEMISE 508
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 2/98 (2%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESVE 132
AYT + +L AC+ L A GKQ+HA +++ S V L+DMYSK G + +
Sbjct: 515 NAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARH 574
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + K ++W ++++ + HG EA +F M +
Sbjct: 575 VFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRK 612
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T VL AC LP+ G H L+ G +S + AL+ MYS+ G L E+ F E
Sbjct: 156 FTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDE 215
Query: 137 IE---FKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
I DV++WN+++S+ ++ A A +F MT
Sbjct: 216 ITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 251
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+ + + ++ + Y ++ + ++F MH+ T +TF VL A S L
Sbjct: 276 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 335
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQ H LM+K G + + VK+AL+DMY+K G + ++ E F ++ D+V W A++S
Sbjct: 336 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++G +EA ++ M +E +
Sbjct: 396 GHVQNGEHEEALTLYARMDKEGI 418
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C IADA + FD++ D+ + + + ++ L+ M +
Sbjct: 369 CGCIADA--------KEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIP 420
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T L AC+ + A E GKQ+H ++K G V +AL MYSK G L + + F
Sbjct: 421 SKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVF 480
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ I +DV+ WN+++S F ++G A +F+ M E
Sbjct: 481 RRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKME 517
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN-LTAYTFTPVLGACSAL 89
++FD + + S ++ + Y + + LF M C + + + T VL A S
Sbjct: 174 RMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVP 233
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+Q+H L++K G V+ +L+ MY+K G +G + F+ ++ +TW+A++
Sbjct: 234 LGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMI 293
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + ++G A A +F M
Sbjct: 294 TGYAQNGEADSAVSMFSQM 312
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 78/164 (47%), Gaps = 4/164 (2%)
Query: 12 AKTCISIADALPKRYVYTH-QVFDEI--SHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
A + I+ +LP+ + VFD+I + D++S NS L +R R A +
Sbjct: 50 ANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNSLLNPLSRHRPLDALSRFRSMLS 109
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK-GGTDSEPVVKTALMDMYSKYGLL 127
S+ + + ++F A + + G HAL K S V T+L++MY K G++
Sbjct: 110 SSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIV 169
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ F + ++ +W+ +++ + ++EAF +F+ M E
Sbjct: 170 SDARRMFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 213
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKY--GLLGESVEAFKEI--EFKDVVTWNA 147
P G+ +HA +K G S V +L++ YS LL + F +I +DV +WN+
Sbjct: 28 PRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVASWNS 87
Query: 148 LLSSFLRH 155
LL+ RH
Sbjct: 88 LLNPLSRH 95
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+S D S +S + Y + + +F M + + VL ACS +
Sbjct: 249 KLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACSNIG 308
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A ++G+ VHA + + + V+ TAL+DMY+K G L E F+E++ +++ TWNA++
Sbjct: 309 AIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNAMIG 368
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
HG A++A +F + R++
Sbjct: 369 GLAIHGRAEDALELFSKLQEGRMK 392
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T+ + ACS A + G+Q+H ++K G S+ +K+A + MY+ +G L ++ + F
Sbjct: 131 NKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMF 190
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E DVV WN ++ +L+ G+ + A G+F M
Sbjct: 191 YSGE-SDVVCWNTMIDGYLKCGVLEAAKGLFAQM 223
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+++ +K G LG++ + F E+ +D ++W++++ ++ G KEA +FQ M RE
Sbjct: 232 NVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQRE 288
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+ + + ++ + Y ++ + ++F MH+ T +TF VL A S L
Sbjct: 276 HVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLG 335
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQ H LM+K G + + VK+AL+DMY+K G + ++ E F ++ D+V W A++S
Sbjct: 336 ALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVS 395
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++G +EA ++ M +E +
Sbjct: 396 GHVQNGEHEEALTLYARMDKEGI 418
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C IADA + FD++ D+ + + + ++ L+ M +
Sbjct: 369 CGCIADA--------KEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIP 420
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T L AC+ + A E GKQ+H ++K G V +AL MYSK G L + + F
Sbjct: 421 SKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVF 480
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ I +DV+ WN+++S F ++G A +F+ M E
Sbjct: 481 RRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKME 517
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN-LTAYTFTPVLGACSAL 89
+VFD + + S ++ + Y + + LF M C + + + T VL A S
Sbjct: 174 RVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVP 233
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+Q+H L++K G V+ +L+ MY+K G +G + F+ ++ +TW+A++
Sbjct: 234 LGLLMGEQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMI 293
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + ++G A A +F M
Sbjct: 294 TGYAQNGEADSAVSMFSQM 312
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 77/164 (46%), Gaps = 4/164 (2%)
Query: 12 AKTCISIADALPKRYVYTH-QVFDEI--SHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
A + I+ +LP+ + VFD+I + D++S NS L + R A +
Sbjct: 50 ANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNSLLNPLSGHRPLDALSRFRSMLS 109
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK-GGTDSEPVVKTALMDMYSKYGLL 127
S+ + + ++F A + + G HAL K S V T+L++MY K G++
Sbjct: 110 SSTVLPSPHSFAAAFTAAARAASAPAGTAAHALACKIPSAVSNVYVCTSLLNMYCKLGIV 169
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ F + ++ +W+ +++ + ++EAF +F+ M E
Sbjct: 170 SDARRVFDGMPQRNSFSWSTMVAGYAAEKCSEEAFDLFRLMLEE 213
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKY--GLLGESVEAFKEI--EFKDVVTWNA 147
P G+ +HA +K G S V +L++ YS LL + F +I +DV +WN+
Sbjct: 28 PRHGEALHAWALKSGAASHAPVANSLINFYSSLPRPLLAAAFAVFDDIPPAARDVTSWNS 87
Query: 148 LLSSFLRH 155
LL+ H
Sbjct: 88 LLNPLSGH 95
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + ++ N+ L+ + ++ T +F YM L +TF VLGAC L
Sbjct: 380 KVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLY 439
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G+QVH + IK G D++ V A++DMYSK G + + F I KD V+WNAL+
Sbjct: 440 SLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIV 499
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ EA + + M
Sbjct: 500 GLAHNEEEGEAINMLKRM 517
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 30 HQVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+++ +E+ H +L + + Y ++ + +F M S + TFT VL ACS
Sbjct: 683 NKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSE 742
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ A GK++H L++K G S +ALMDMYSK G + S E FKE++ + +++ WN+
Sbjct: 743 MAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMPWNS 802
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ F ++G A EA +FQ M +++
Sbjct: 803 MIVGFAKNGYANEALLLFQKMQESQIK 829
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 88/172 (51%), Gaps = 3/172 (1%)
Query: 6 RMTNFPAK-TCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
+M + P + TC++I L R + I + N+ + SY++S +
Sbjct: 251 KMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFG 310
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
L+ M L T TF +L A + + A + G+Q+HA +K G D+ V ++L+++Y
Sbjct: 311 LYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYV 370
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K+G + ++ + F K++V WNA+L F+++ L +E +FQ M R +E
Sbjct: 371 KHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLE 422
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ VL ACS L A E G+QVH ++K G S + L+DMY+K G + ++ F
Sbjct: 158 FGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDG 217
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I D + W ++++ + R G ++A +F M +
Sbjct: 218 IACPDTICWTSMIAGYHRVGRYQQALALFSRMEK 251
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 55/100 (55%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ L +F + ACS + A E GKQ+H+ IK S V ++L+D+YSK+G + S
Sbjct: 522 IALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSR 581
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ +V NAL++ +++ EA +FQ + ++
Sbjct: 582 KVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKD 621
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 36 ISHGDLSSL---NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
++H D SS+ N+ + ++ LF + + +TFT +L C+ +
Sbjct: 584 LAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSS 643
Query: 93 ERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLS 150
GKQVH +K + + + +L+ +Y K LL ++ + +E+ + K++V W A +S
Sbjct: 644 VIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATIS 703
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++G + ++ +F M
Sbjct: 704 GYAQNGYSVQSLVMFWRM 721
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 37/70 (52%)
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
M K G+ + V ++ + G LG++ K I V WNA+++S+ + GL E
Sbjct: 249 MEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEV 308
Query: 162 FGVFQAMTRE 171
FG+++ M ++
Sbjct: 309 FGLYKDMKKQ 318
>gi|410110005|gb|AFV61082.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
aristata]
Length = 352
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 86/159 (54%), Gaps = 8/159 (5%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ I+ DL S N+ L +++ LF +H
Sbjct: 194 ISNALVSMYLKSNSRNVEDALKIFEXINVKDLVSWNTILTGLSQNGLSENALRLFQXIHL 253
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L + G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 254 DHLVXDQYTFAAVLRSCSDLAXLQLGRQIHVLVVKSGXEGNEYVASALIFMYSKCGIIED 313
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ E+F+ + VTWN+++ ++ +HG K A +F M
Sbjct: 314 AWESFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLM 352
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDV 142
AC GK +HAL+IK G D + AL+ MY K + ++++ F+ I KD+
Sbjct: 166 ACFEDTQQSLGKSLHALVIKKGLDEXTQISNALVSMYLKSNSRNVEDALKIFEXINVKDL 225
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+WN +L+ ++GL++ A +FQ +
Sbjct: 226 VSWNTILTGLSQNGLSENALRLFQXI 251
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R +VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 3 RRVEDASKVFKYMRERNAVSWNALIGGYAEMGNLEXCVXLFVGMEXDGVRVDDATFAPLL 62
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H ++K G + E V A + Y++ G ++ F ++D+
Sbjct: 63 TLLNDAESYDLTRQLHXKIMKRGLEYENTVLNAXITAYAECGCXEDAKRVFDXSHGYRDL 122
Query: 143 VTWNALLSSFLRHGLAKEAFGV 164
VTWN++L+++L H L E +GV
Sbjct: 123 VTWNSMLAAYLEHNL--EEYGV 142
>gi|225423995|ref|XP_002279343.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 623
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR Y Q+FD+I +++ NS Y +S ++ LF M + +TF VL
Sbjct: 84 KRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVL 143
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+C + A G+QVH +IK G P V T L+DMYS G +G++ + F E+ ++VV
Sbjct: 144 KSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVV 203
Query: 144 TWNALLSSFL 153
W ++++ ++
Sbjct: 204 AWTSMINGYI 213
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSALP 90
+F+E+ ++ S N+ + Y + F F M S + + T VL AC+ L
Sbjct: 286 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 345
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GK VH G V ALMDMY+K G++ ++ F+ ++ KD+++WN L+
Sbjct: 346 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 405
Query: 151 SFLRHGLAKEAFGVFQAM 168
H +A +F M
Sbjct: 406 GLAMHSRGADALNLFFQM 423
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA HQVF E+ D+ S NS + Y + + LF M +
Sbjct: 75 CRSVLDA--------HQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIP 126
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T+ +L AC + E GK++H+ +IK G +P V+ +L+ MY K G L + + F
Sbjct: 127 NKITYISILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVF 186
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I +DVV++N +L + + KE G+F M+ E +
Sbjct: 187 AGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGI 225
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
LPK ++F + DL S N+ + Y R + L+ M S + TF
Sbjct: 381 LPK----ARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLH 436
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L AC+ A GK +H +++ G S + ALM+MY + G L E+ F+ + +D
Sbjct: 437 LLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARD 496
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V++WN++++ +HG + A+ +FQ M E +E
Sbjct: 497 VISWNSMIAGHAQHGSYETAYKLFQEMQNEELE 529
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 74/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF IS D+ S N+ L Y + LF M S ++ T+ +L A +
Sbjct: 184 QVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPS 243
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK++H L ++ G +S+ V TAL+ M + G + + +AFK I +DVV +NAL++
Sbjct: 244 MLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIA 303
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HG EAF + M + V
Sbjct: 304 ALAQHGHNVEAFEQYYRMRSDGV 326
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VF+ D+ S NS + + + ++ + LF M + L TF VL C
Sbjct: 486 QNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNP 545
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E GKQ+H + + G + + AL++MY + G L ++ F ++ +DV++W A++
Sbjct: 546 EALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMI 605
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
G +A +F M E
Sbjct: 606 GGCADQGEDMKAIELFWQMQNE 627
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
S IR+ C+ D + Q F I+ D+ N+ + + + + +
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAK-----QAFKGIADRDVVVYNALIAALAQHGHNVEAFE 316
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+ M S + L T+ +L ACS A E GK +H+ + + G S+ + AL+ MY+
Sbjct: 317 QYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYA 376
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ G L ++ E F + +D+++WNA+++ + R EA +++ M E V+
Sbjct: 377 RCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVK 428
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ +L C+ K++HA M++ G + + L++MY K + ++ + FKE+
Sbjct: 29 TYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DV++WN+L+S + + G K+AF +F+ M
Sbjct: 89 PRRDVISWNSLISCYAQQGFKKKAFQLFEEM 119
>gi|15234984|ref|NP_194257.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75265547|sp|Q9SB36.1|PP337_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g25270, chloroplastic; Flags: Precursor
gi|4454015|emb|CAA23068.1| putative protein [Arabidopsis thaliana]
gi|7269378|emb|CAB81338.1| putative protein [Arabidopsis thaliana]
gi|332659633|gb|AEE85033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 30 HQVFDEISHGDLS--SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
H+VFD +S D S + NS + Y + AL+ M + +TF VL AC
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 206
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + + G+ +H ++K G + V AL+ MY+K G + ++ F I KD V+WN+
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L+ +L HGL EA +F+ M + +E
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIE 293
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V VFD I H D S NS L Y +F M + + VL
Sbjct: 247 VKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARV 306
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + G+Q+H +I+ G + E V AL+ +YSK G LG++ F ++ +D V+WN
Sbjct: 307 LSF---KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
A++S+ H F+ M R
Sbjct: 364 AIISA---HSKNSNGLKYFEQMHR 384
Score = 38.9 bits (89), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A+AL Y Q +FD++ D S N+ + +++++ N F MH
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHR 384
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLG 128
TF VL C+ E G+++ +LM K G D + ++++Y + G++
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 129 ESVEAF-KEIEFKDVVT-WNALLSSFLRHG 156
E+ +E+ + T W ALL + HG
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
>gi|224079221|ref|XP_002305798.1| predicted protein [Populus trichocarpa]
gi|222848762|gb|EEE86309.1| predicted protein [Populus trichocarpa]
Length = 584
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL--TAYTFTPVLGA 85
YT Q+F + + D S + S ++ NF + ++L+ Y N+ + YTFT V+ +
Sbjct: 62 YTRQIFLIVPNPDSFLFTSLIRSTSKFHNF-SVYSLYFYTRMVLSNVAPSNYTFTSVIKS 120
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ L A G+ +H ++ G S+ V+TALM Y K G+L + + F ++ + VVTW
Sbjct: 121 CADLVALRHGRIIHGHVLVNGFGSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTW 180
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
N+++S + ++G AKEA +F M VE
Sbjct: 181 NSMISGYEQNGFAKEAIRLFDRMKEIGVE 209
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ + + NS + Y ++ LF M + + TF VL AC+ L
Sbjct: 167 KVFDKMRDRSVVTWNSMISGYEQNGFAKEAIRLFDRMKEIGVEPNSATFVSVLSACAHLG 226
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G VH + G D V+ T+L++MY++ G + ++ E F ++ ++VV W A++S
Sbjct: 227 AFILGCWVHEYAVGNGLDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMIS 286
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ +G +A +F M R
Sbjct: 287 GYGTNGYGSQAVELFHEMRRN 307
>gi|302800421|ref|XP_002981968.1| hypothetical protein SELMODRAFT_228785 [Selaginella moellendorffii]
gi|300150410|gb|EFJ17061.1| hypothetical protein SELMODRAFT_228785 [Selaginella moellendorffii]
Length = 637
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A +FT +GACSAL E+G +HA + G +++ + TAL++MY K GL + + F
Sbjct: 112 NAVSFTTAIGACSALGWIEKGAAIHARLAGTGLETDVGLATALVNMYGKRGLFDMATKVF 171
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + K VVTW+AL++++ +HG A+EAF +++ M RE
Sbjct: 172 ESMTAKTVVTWSALIAAYAQHGHAEEAFDLYRRMMRE 208
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F VL ACS + G+ +H + I ++ V+ TAL+D YS G L + AF I
Sbjct: 321 FASVLNACSTKKWSDDGRAIHRI-IPPRLEATAVIGTALVDFYSNCGDLANAKAAFARIV 379
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
KDV WNA++ + ++H L +EA +F M E
Sbjct: 380 AKDVAAWNAIIGACIQHRLYEEALEIFYRMNVE 412
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 85/173 (49%), Gaps = 6/173 (3%)
Query: 6 RMTNFPAKTCISIADAL----PKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNFPA 59
R+ +T + +A AL KR ++ +VF+ ++ + + ++ + +Y + +
Sbjct: 138 RLAGTGLETDVGLATALVNMYGKRGLFDMATKVFESMTAKTVVTWSALIAAYAQHGHAEE 197
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
+ L+ M TF VL ACS + ERG+++H+ ++ G D V+ ++
Sbjct: 198 AFDLYRRMMREGSKPNEVTFLSVLSACSTMRWLERGREIHSEIVNLGLDRSLVLMNTVLT 257
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
MY K L E+ E F + +D+ +W ++++ + G + A +F+++ ER
Sbjct: 258 MYIKCRSLDEAGEFFAAMASRDLKSWMFIIAANAQQGRPERALALFRSLLEER 310
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY-TFTPVLGACSALPA 91
F I D+++ N+ + + + R + +F M+ +L + TF +L AC+ P+
Sbjct: 375 FARIVAKDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLPNHRTFVALLEACTESPS 434
Query: 92 -PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G++++ ++ G + V+ T +++M++K G L + + F + KD+V+W A+++
Sbjct: 435 LGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDVFARMPIKDLVSWTAIIA 494
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R G EA ++ M + +E
Sbjct: 495 AHTRSGARVEARELYWMMALQGLE 518
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEA 133
A TF ++ AC + +RG+ +H ++ G D + + A++ MY + G + E+ A
Sbjct: 9 NAITFLNLIVACGSSGDLKRGRILHDRIVSCGFDHQLANLGNAIVHMYGRSGSIAEARRA 68
Query: 134 FKEI--EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F I K V ++N++L +++ GL EA +F M +
Sbjct: 69 FLAIPSRLKSVASFNSMLRAYVLAGLQCEAIDLFDQMPND 108
>gi|255571614|ref|XP_002526753.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533942|gb|EEF35667.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 818
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 81/142 (57%), Gaps = 2/142 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFDE+S ++ S + + Y+R R F T LF M + + +T VL +C+
Sbjct: 531 HVFDEMSERNVVSWTAMISGYSR-RGFAFETLHLFVRMLRSDIEPNEFTLATVLTSCTDA 589
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+Q+H+L+IK DS V ++L+DMY+K G + E+ F+ + +DVV+ A++
Sbjct: 590 SGSELGRQIHSLIIKCNYDSHIFVGSSLLDMYAKAGRILEARMVFESLPERDVVSCTAII 649
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S + + GL +EA +F+ + RE
Sbjct: 650 SGYAQLGLDEEALELFRRLERE 671
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + VF+ + D+ S + + Y + LF + L+ T+ VL
Sbjct: 626 RILEARMVFESLPERDVVSCTAIISGYAQLGLDEEALELFRRLEREGLSSNCVTYASVLT 685
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ S L A + GKQVH+ +++ V++ +++DMYSK G L + F + + V++
Sbjct: 686 SLSGLAALDHGKQVHSHVLRRELPFYVVLQNSMIDMYSKCGSLNYARRIFDSMPERTVIS 745
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WNA+L + +HG+ +E +F+ M E
Sbjct: 746 WNAMLVGYGKHGMGREVVELFKLMRTE 772
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 50/96 (52%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C A G++VHA +IK ++T L+ Y+K LL ++ F E+
Sbjct: 478 YNTLLNECVNNKAIREGQRVHAHIIKTYYLPSVYLRTRLIVFYTKCDLLMDARHVFDEMS 537
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++VV+W A++S + R G A E +F M R +E
Sbjct: 538 ERNVVSWTAMISGYSRRGFAFETLHLFVRMLRSDIE 573
>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
Length = 605
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 17 SIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
S++ AL Y ++ Q+FDE + L+S N+ + T++ A +LF M
Sbjct: 168 SVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKN 227
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
+N T T +L AC+ + A G+ VH+L+ +S V TAL+DMY+K G + +
Sbjct: 228 NVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVA 287
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
E F + K+ VTWNA++S + HG +EA +F M V+
Sbjct: 288 RELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVK 331
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F EI DL S N+ + +T + + LF + S+ +++ T ++ S
Sbjct: 88 LFGEIRKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGLIPVYSPFGH 147
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+H +K G S V TAL +Y + + + + F E K + +WNA++S
Sbjct: 148 SYLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEKTLASWNAMISG 207
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
++GL A +FQ M + V
Sbjct: 208 CTQNGLTDAAISLFQTMQKNNV 229
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 2/98 (2%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL A + L + G Q+ L IK G S + T L+ ++SK G + + F EI
Sbjct: 33 TVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKCGEVEIARLLFGEI 92
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM--TRERV 173
KD+++ NA++S F +G +++ +F+ + + ERV
Sbjct: 93 RKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERV 130
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 80/144 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S N+ + YT S LF MH +++ +T + + AC+A A
Sbjct: 114 VFDIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYA 173
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
KQ+H + +K DS V TA++D+Y+K ++ ++ F+++ + +VTW++L +
Sbjct: 174 INECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAG 233
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
++++GL +EA +F+ RE VE
Sbjct: 234 YVQNGLHEEALHLFRCAQREGVEL 257
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+++ L + +S Y ++ LF + LT +T + +L AC++L
Sbjct: 215 VFEKMPERTLVTWSSLFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLAL 274
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q+HA+++K G V +L+D+Y++ G + ++ F +E K+VV WNA+++S
Sbjct: 275 KIEGIQLHAVILKCGFHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIAS 334
Query: 152 FLRHGLAKEAFGVFQAMTR 170
F RH + EA +F+ M +
Sbjct: 335 FSRHAHSWEAMILFEKMQQ 353
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C+ + GK H L I G ++ + L+++Y+K G + F + + +
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V+WN +++ + G +A +F M RE
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHRE 152
>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
Length = 624
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + + R + +F M T +T++ + + + A
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGA 268
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA M+K V ++DMY+K G + ++ + F+ + KD+VTWN++L++
Sbjct: 269 LEQGKWVHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTA 328
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
F ++GL KEA F+ M + +
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGI 350
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 71/148 (47%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V H+VFD++ D+ S S + Y ++ L M +TF +L A
Sbjct: 103 VEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAA 162
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
A G Q+HAL +K + V +AL+DMY++ G + + F +++ K+ V+WN
Sbjct: 163 GAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLDSKNGVSWN 222
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AL+S F R G + A VF M R E
Sbjct: 223 ALISGFARKGDGETALMVFAEMQRNGFE 250
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/107 (20%), Positives = 54/107 (50%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
++ S L T + + AC+ + +++H + + + + +L+ +Y K G
Sbjct: 41 HLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCG 100
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ E+ + F ++ KD+V+W +L++ + ++ + EA G+ M + R
Sbjct: 101 SVVEAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGR 147
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 66/155 (42%), Gaps = 2/155 (1%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
++T F T + + A + +VF+ + + DL + NS L ++ + + F
Sbjct: 285 KLTAFVGNTMLDMY-AKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFE 343
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M + + L TF +L ACS + GK ++ + + E ++D+ + G
Sbjct: 344 EMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLLGRAG 403
Query: 126 LLGES-VEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
LL + V FK W ALL++ H AK
Sbjct: 404 LLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAK 438
>gi|297818116|ref|XP_002876941.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322779|gb|EFH53200.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 652
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 9/168 (5%)
Query: 16 ISIADALPKRYVY------THQVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMH 68
I+I +A+ Y +VFD + DL S NS + ++ + + LF MH
Sbjct: 184 ITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIAGLSKHEQKESAFELFTEMH 243
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY--GL 126
+ YT+T ++ ACS GK +H L+IK G + V AL+ MY ++ G+
Sbjct: 244 RNWIETDIYTYTGIVSACSGEEHQSFGKSLHGLVIKKGLEQVTSVSNALISMYIQFPTGV 303
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +++ F+ ++ KD+V+WN++++ F ++GL+++A F+ + +E
Sbjct: 304 MKDALSLFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIE 351
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D S N+ + YT +W LF M + Y+F+ +L ++
Sbjct: 2 RLFDEMPQRDSVSWNTMISGYTSCGKLENSWCLFTDMKRCGCYVDGYSFSRLLKGIASAK 61
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+QVH L++KGG + V ++L+DMY+K + ++ AF EI + V+WNAL++
Sbjct: 62 RFDLGEQVHGLVVKGGYECNVYVGSSLVDMYAKCERVEDAFGAFMEILEPNSVSWNALIA 121
Query: 151 SFLRHGLAKEAFGVFQAM 168
F++ K AF + M
Sbjct: 122 GFVQVRDTKTAFWLLGLM 139
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + DL S NS + ++++ F Y+ S+ + + Y F+ VL +CS L
Sbjct: 310 LFESLKPKDLVSWNSIMTGFSQNGLSEDAVKFFRYLRSSNIEVDDYAFSAVLRSCSDLAT 369
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
+ G+Q HAL K +S V ++L+ MYSK G++ + + F++I K + + WNA++
Sbjct: 370 LQLGQQTHALATKSSFESNEFVTSSLILMYSKCGVIENARKCFEQISSKHNTIAWNAMIL 429
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ +HG + + +F M + V+
Sbjct: 430 GYAQHGSGQVSLDLFSQMCNQNVKL 454
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
F EI + S N+ + + + R+ A W L + + TF P+L
Sbjct: 105 FMEILEPNSVSWNALIAGFVQVRDTKTAFWLLGLMEMKAAVTMDDGTFAPLLTLLDDPMF 164
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLS 150
KQVHA ++K G + E + A++ Y+ GL+ ++ F + KD+++WN++++
Sbjct: 165 CNLLKQVHAKVLKLGLEHEITICNAMISSYANCGLVSDAKRVFDGLGGSKDLISWNSMIA 224
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+H + AF +F M R +E
Sbjct: 225 GLSKHEQKESAFELFTEMHRNWIE 248
>gi|147806113|emb|CAN65480.1| hypothetical protein VITISV_030746 [Vitis vinifera]
Length = 686
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR Y Q+FD+I +++ NS Y +S ++ LF M + +TF VL
Sbjct: 147 KRMTYARQLFDQIPDPNIALWNSMFRGYAQSESYREVVFLFFQMKGMDIRPNCFTFPVVL 206
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+C + A G+QVH +IK G P V T L+DMYS G +G++ + F E+ ++VV
Sbjct: 207 KSCGKINALIEGEQVHCFLIKCGFRGNPFVGTTLIDMYSAGGTVGDAYKIFCEMFERNVV 266
Query: 144 TWNALLSSFL 153
W ++++ ++
Sbjct: 267 AWTSMINGYI 276
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSALP 90
+F+E+ ++ S N+ + Y + F F M S + T VL AC+ L
Sbjct: 349 LFEEMPERNIFSWNALIGGYAHNGLFFEVLGSFKRMLSESDVPPNDATLVTVLSACARLG 408
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GK VH G V ALMDMY+K G++ ++ F+ ++ KD+++WN L+
Sbjct: 409 ALDLGKWVHVYAESSGLKGNVYVGNALMDMYAKCGIIENAISVFRGMDTKDLISWNTLIG 468
Query: 151 SFLRHGLAKEAFGVFQAM 168
H +A +F M
Sbjct: 469 GLAMHSRGADALNLFFQM 486
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 6/161 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y + F++I D S N+ + + +S + +F M+
Sbjct: 551 LSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQ 610
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +TF + A + ++GKQ+HA+MIK G DSE L+ +YSK G + +
Sbjct: 611 AGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIED 670
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F E+ K+VV+WNA+++ + +HG EA +F+ M +
Sbjct: 671 AKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQ 711
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +Y + N ++ +F M L YT+ +L C++L A + G+Q+H +IK
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK 443
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G V + L+DMY+K+G L + + + +DVV+W A+++ + +H L EA +
Sbjct: 444 SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKL 503
Query: 165 FQAMTRERV 173
FQ M + +
Sbjct: 504 FQEMENQGI 512
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+ + D+ S + + YT+ F LF M + + F+ + AC+ + A
Sbjct: 472 ILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQA 531
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+G+Q+HA G + + AL+ +Y++ G ++ AF++I+ KD ++WNAL+S
Sbjct: 532 LNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISG 591
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F + G +EA VF M + VE
Sbjct: 592 FAQSGHCEEALQVFSQMNQAGVE 614
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 63/106 (59%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LFC MH + + T Y F+ VL AC+ + + G+Q+H ++K G SE V AL+ +YS
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYS 259
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++G L + + F ++ +D +++N+L+S + G + A +F+ M
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGA 85
+ Q+F ++ D S NS L S R F LF M C+ T +L A
Sbjct: 265 IAAEQIFSKMHRRDRISYNS-LISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSA 323
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+++ A +GKQ+H+ +IK G S+ +++ +L+D+Y K + + E F E ++VV W
Sbjct: 324 CASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLW 383
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRE 171
N +L ++ + G E++ +F M E
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIE 409
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD+I ++S N + + LF M + + TF VL ACS
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
AP + +Q+HA +I G S P+V L+D+YSK G + + F+ + KD V+W A++
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S ++G EA +F M + V
Sbjct: 186 SGLSQNGREDEAILLFCQMHKSAV 209
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
K++HA + K G D E V+ + L+D+Y +G + +++ F +I +V WN ++S L
Sbjct: 30 KKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAK 89
Query: 156 GLAKEAFGVFQAMTRERV 173
LA + G+F M E V
Sbjct: 90 KLASQVLGLFSLMITENV 107
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + S N+ + + R + T F M T +T++ V A + +
Sbjct: 219 RVFDWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIG 278
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+G+ VHA MIK G V ++ MY+K G + ++ + F ++ +D+VTWN +L+
Sbjct: 279 ALEQGRWVHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLT 338
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+F ++GL KEA F+ + + ++
Sbjct: 339 AFAQYGLGKEAVAHFEEIRKYGIQL 363
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +++DA VFD I D+ S + Y ++ L M
Sbjct: 110 CGAVSDA--------RHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRP 161
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +TFT L A A G+Q+HAL +K D + V +AL+DMY++ + ++ F
Sbjct: 162 SGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVF 221
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ K+ V+WNAL++ F R G + F M R
Sbjct: 222 DWLDSKNEVSWNALIAGFARKGDGETTLMKFAEMQRN 258
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 65/155 (41%), Gaps = 2/155 (1%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
++T F A T + + A V +VFD + DL + N+ L ++ + A F
Sbjct: 296 KLTAFVANTILGMY-AKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFE 354
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+ + L TF VL ACS + GKQ +M + E + +D+ + G
Sbjct: 355 EIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAG 414
Query: 126 LLGES-VEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
LL E+ + FK W ALL + H AK
Sbjct: 415 LLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAK 449
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T + ++ AC+ + +H+ + + + + +L+ MY K G + ++ F
Sbjct: 61 TPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVF 120
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
I +DVV+W L++ + ++ + EA G+ M R R
Sbjct: 121 DGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRAR 158
>gi|255553863|ref|XP_002517972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542954|gb|EEF44490.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 483
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT--AYTFTPVLGACS 87
++FDE+ D S + +YTR+ + F Y+ L L +TF VL AC
Sbjct: 208 RRLFDELLEPDAICWTSVISAYTRNDMYDKALGFF-YLMQRKLGLAPDGFTFGTVLTACG 266
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L ++GK+VHA +I G VV+++L+DMY K GL+ ES F + K+ V+W+A
Sbjct: 267 NLRRLKQGKEVHAKLITSGFSGNVVVESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSA 326
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
LL F ++G + +F+ M
Sbjct: 327 LLGGFCQNGDFESVIRIFREM 347
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VFD +S + S ++ L + ++ +F + +F M Y+F VL AC+
Sbjct: 309 SQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEA---DDLYSFGTVLRACAG 365
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A +GK+VH ++ G + ++++AL+D+Y+K G + + F ++ ++++TWN++
Sbjct: 366 LAAVRQGKEVHCQYVRRGGWRDVIIESALVDLYAKCGCIDFAHRIFTKMTVRNLITWNSM 425
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
+ F ++G A+EA +F M +E
Sbjct: 426 ICGFAQNGWAEEALRIFDEMVKE 448
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
S + F + +++ L + T +VFD + D+ S S + Y +
Sbjct: 80 SGLETDRFVGNSLLALYFKLSTDFFETRRVFDGLYFRDVISWTSMITGYVKGEKPKKALD 139
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M ++ A+T + V+ AC+ L GK H +++ G S V+ +AL+D+Y
Sbjct: 140 LFWEMLDVGVDPNAFTLSAVIKACTDLGTLMLGKCFHCVIMIRGFHSNHVIGSALIDLYG 199
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ L ++ F E+ D + W +++S++ R+ + +A G F M R+
Sbjct: 200 RNYELDDARRLFDELLEPDAICWTSVISAYTRNDMYDKALGFFYLMQRK 248
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL-LGESVEAFK 135
+ + +L C+ + + G Q+HA ++K G +++ V +L+ +Y K E+ F
Sbjct: 52 FIYASLLQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFD 111
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F+DV++W ++++ +++ K+A +F M
Sbjct: 112 GLYFRDVISWTSMITGYVKGEKPKKALDLFWEM 144
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F E + S N+ + Y ++ N LF M + T T++ VL AC+ +
Sbjct: 403 QLFSESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIA 462
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G Q+H+L +K D VV AL+DMY+K G + ++ F + D V+WNA++S
Sbjct: 463 ALEPGSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMIS 522
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HGL EA F++M
Sbjct: 523 GYSVHGLYGEALKTFESM 540
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+E+ D+ + + Y +S +FC M + +T +L AC++L
Sbjct: 302 QVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLV 361
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+H ++K G D V ALMDMY+K G + S++ F E V+WN ++
Sbjct: 362 DLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIV 421
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++ G ++A +F+ M +V+
Sbjct: 422 GYVQAGNGEKALILFKDMLECQVQ 445
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 66/140 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD I + D+ S + Y + F + LF M +TF VL AC L
Sbjct: 201 QVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLE 260
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH K E V L+D+Y K G + ++++ F+E+ DV+ W+ +++
Sbjct: 261 VFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIA 320
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ + ++EA +F M R
Sbjct: 321 RYAQSEQSEEAIEMFCRMRR 340
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D+LP ++FDE+ + S + + Y++ F LF + L + F
Sbjct: 93 DSLPD----AAKLFDEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVF 148
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
+ VL + + G VHA + K G DS+ V TAL+D YS G + + F IE+
Sbjct: 149 STVLKLLVSAEWAKLGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEY 208
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KD+V+W +++ ++ + +E+ +F M
Sbjct: 209 KDMVSWTGMVACYVENECFEESLKLFSRM 237
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D S N+ + Y+ + F M T TF +L ACS
Sbjct: 505 VFDMLREHDQVSWNAMISGYSVHGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGL 564
Query: 92 PERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
+RG+ M++ D EP + T ++ + + G L ++ + EI F+ V+ W AL
Sbjct: 565 LDRGQAYFKSMVE-EYDIEPCAEHYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRAL 623
Query: 149 LSSFLRHG 156
LS+ + H
Sbjct: 624 LSACVIHN 631
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 77/139 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ ++ N L ++ + + ++ LFC M + + +T+ +L C+
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H+L +K G +S+ V L+DMYSKYG L ++ + ++ KDVV+W ++++
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+++H K+A F+ M +
Sbjct: 421 YVQHECCKDALAAFKEMQK 439
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y ++ F+EI H D + N + + +S +F M
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + +TF L A + L ++GKQ+HA +IK G E V AL+ +Y K G +
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F E+ ++ V+WN +++S +HG EA +F M +E ++
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIK 645
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V + + D+ S S + Y + A F M + + C+ +
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G Q+HA + G + + AL+++Y++ G + E+ +F+EIE KD +TWN L+S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F + GL +EA VF M + V+
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVK 544
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ H D + N+ + + + + +F M + L+ T + +L AC++L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G Q+H+ + K G S+ +++ +L+D+Y K G + ++ F + +VV WN +L
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 151 SFLRHGLAKEAFGVFQAM 168
+F + ++F +F M
Sbjct: 319 AFGQINDLAKSFELFCQM 336
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA + G +V L+D+YSK GL+ + F+E+ +D V+W A+LS + ++G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 157 LAKEAFGVFQAMTRERV 173
L +EA G+++ M R V
Sbjct: 123 LGEEALGLYRQMHRAGV 139
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
LP R +VF+E+S D S + L Y ++ L+ MH + T Y +
Sbjct: 94 LPAR-----RVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL +C+ +G+ +HA K G SE V A++ +Y + G + F ++ +D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
VT+N L+S + G + A +F+ M
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEM 235
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + + LF M + T+ VL AC+
Sbjct: 150 QKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVRPDESTYVTVLSACAHS 209
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH+ + G DS + AL+D+YSK G + + F+ + +KDV++WN L+
Sbjct: 210 GSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGLFQGLSYKDVISWNTLI 269
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 270 GGYTHMNLYKEALLLFQEMLR 290
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +S+ D+ S N+ + YT + LF M + T VL AC+ L A
Sbjct: 253 LFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGA 312
Query: 92 PERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H + K G + ++T+L+DMY+K G + + + F + K + +WNA++
Sbjct: 313 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMI 372
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F HG A +F +F M + +E
Sbjct: 373 FGFAMHGRADASFDLFSRMRKIGIE 397
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I + N+ + + S + ++ L+ M S L +YTF
Sbjct: 12 DGLP----YATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTF 67
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY------------------ 121
+L +C+ G+Q+H ++K G D + V T+L+ MY
Sbjct: 68 PFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSH 127
Query: 122 -------------SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ G + + + F EI KDVV+WNA++S + G KEA +F+ M
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187
Query: 169 TRERV 173
+ V
Sbjct: 188 MKMNV 192
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVF+ + H LSS N+ +F + A++ LF M + TF +L ACS
Sbjct: 354 HQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHS 413
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ + M + + + M D+ GL E+ E +E + D V W +
Sbjct: 414 GMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCS 473
Query: 148 LLSSFLRHG 156
LL + HG
Sbjct: 474 LLKACKMHG 482
>gi|255541594|ref|XP_002511861.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549041|gb|EEF50530.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 751
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 72/137 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++++ DL + ++ + Y R ++ M ST TF +L ACSAL A
Sbjct: 268 VFDQLNYKDLIAWSAMISVYARGGKPYDALNIYRQMQSTNEKANEVTFVSLLQACSALGA 327
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ +H + K G S + +AL+D+Y K+G + + F EI KD++ W+++++
Sbjct: 328 QELGESIHGFITKAGHSSNAFLNSALIDLYCKFGSVKKGKAVFDEISTKDLICWSSMING 387
Query: 152 FLRHGLAKEAFGVFQAM 168
+ +G EA F M
Sbjct: 388 YALNGCGSEALETFADM 404
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD+ H D+ ++ + + ++ + F M + T +L AC L
Sbjct: 65 KLFDQKLHNDVVLWSAMVSACVKNAKYREGVQHFRRMLNYGTEANHVTVISILSACGHLG 124
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K++H +K S VV+ +LMD Y+K G + S F I KD+++W ++
Sbjct: 125 GLCFVKEIHGFCLKKVFYSFTVVQNSLMDAYAKCGKIEASFYIFNRICEKDLISWRTVIR 184
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + +EA +F M R E
Sbjct: 185 ICVENECPREALDIFLKMQRSTTE 208
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G HA + K G V TAL+ MY K+ + F ++ +KD++ W+A++S + R
Sbjct: 230 GLGFHAYIEKNGFSGYVSVGTALLQMYGKFSKFSSAWLVFDQLNYKDLIAWSAMISVYAR 289
Query: 155 HGLAKEAFGVFQAM 168
G +A +++ M
Sbjct: 290 GGKPYDALNIYRQM 303
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 1/91 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T V+ A + H +IK G + E V+TAL+ Y+ + S++ F +
Sbjct: 12 TLVSVIRGLGAFHCQDLISAAHGFVIKLGFELEVPVRTALIRFYTLFDF-EISLKLFDQK 70
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
DVV W+A++S+ +++ +E F+ M
Sbjct: 71 LHNDVVLWSAMVSACVKNAKYREGVQHFRRM 101
>gi|357508535|ref|XP_003624556.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499571|gb|AES80774.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 476
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I ++ S + + Y ++ N + LF M + +T ++ AC+ L
Sbjct: 206 EVFERIPSKNVVSWTAMINGYVKNDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLG 265
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G+++H +K G + P + TAL+DMYSK G L +V+ F +E +++ TWN +L+
Sbjct: 266 SLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLDAAVKVFGLMEVRNLATWNTMLT 325
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
SF HG E +F+ M + V
Sbjct: 326 SFGVHGFGNEVLDLFKEMEKAGV 348
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL--TAYTFTPVLGA 85
Y VFD+++ D+ + N + +Y S P ++F + C +T+ V+ A
Sbjct: 70 YASLVFDQLNDPDIFTWNVMIRAYNTS-GLPQK-SIFLFKDMICCGFLPDKFTYPFVINA 127
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY-GLLGESVEAFKEIEFKDVVT 144
C A + G+ H L IK G S+ V+ +M++Y K G + + + F ++ ++VV+
Sbjct: 128 CIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVS 187
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
W +++ + G A VF+ + + V
Sbjct: 188 WTTVIAGLVACGKLDTAREVFERIPSKNV 216
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 39/73 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
KQ+HA +I+ + ++ L + S YG + + F ++ D+ TWN ++ ++
Sbjct: 37 KQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQLNDPDIFTWNVMIRAYNTS 96
Query: 156 GLAKEAFGVFQAM 168
GL +++ +F+ M
Sbjct: 97 GLPQKSIFLFKDM 109
>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Glycine max]
Length = 703
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + ++ + + L +Y ++ +F T LF M +TF +L AC++L A
Sbjct: 287 FDGLRDRNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVAL 346
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G +H ++ G + +V AL++MYSK G + S F + +DV+TWNA++ +
Sbjct: 347 AYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGY 406
Query: 153 LRHGLAKEAFGVFQAM 168
HGL K+A VFQ M
Sbjct: 407 SHHGLGKQALLVFQDM 422
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+ D + D+ S NS L + S + M C+ + T+ VLG C+ +
Sbjct: 184 QILDTVPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIR 243
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+HA ++K G + V + L+D Y K G + + + F + ++VV W A+L+
Sbjct: 244 DLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRDRNVVAWTAVLT 303
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++L++G +E +F M E
Sbjct: 304 AYLQNGHFEETLNLFTKMELE 324
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y FT VL C+ + GKQ H ++K G VK AL+ MYS+ + +++
Sbjct: 129 YIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRCFHVDSAMQILDT 188
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ DV ++N++LS+ + G EA V + M E V
Sbjct: 189 VPGDDVFSYNSILSALVESGCRGEAAQVLKRMVDECV 225
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 95 GKQVHA-LMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +HA L+++ T DS+ +L+++YSK G + + F + ++VV+W+AL+
Sbjct: 42 GKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRMLQRNVVSWSALMMG 101
Query: 152 FLRHGLAKEAFGVFQAMT 169
+L G E G+F+ +
Sbjct: 102 YLHKGEVLEVLGLFRNLV 119
>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
Length = 935
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP-- 90
FD I D+ S N+ +Y + LF M + + TF L AC+A P
Sbjct: 412 FDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRPSVATFITALTACAAYPPQ 471
Query: 91 -APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVTWNA 147
A GK++ +L+ + G + + V A ++MY+K G L ++ F+ I +D +TWN+
Sbjct: 472 TASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITWNS 531
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+L+++ HGL KEAF +FQAM E++
Sbjct: 532 MLAAYGHHGLGKEAFELFQAMEAEKL 557
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ ++ ACS L G+++H+ + + V+ AL+ MYSK G L ++ +AF
Sbjct: 142 HALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDR 201
Query: 137 I---EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +DVVTWNA++S+FLR+G A+EA +F+ M R+
Sbjct: 202 LPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRD 239
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 9 NFPAKTCISIADALPKRYVYTHQVFDEIS--HGDLSSLNSQLFSYTRSRNFPATWALFCY 66
N AK C S+ADA VF+ IS D + NS L +Y + LF
Sbjct: 501 NMYAK-CGSLADA--------RAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQA 551
Query: 67 MHSTCL-NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M + L TF VL A ++ + +G+++HA ++ G +S+ V++ AL++MY+K G
Sbjct: 552 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCG 611
Query: 126 LLGESVEAFKEIEF--KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
L ++ F + +DV+ W +L++ + ++G A+ A +F M ++ V
Sbjct: 612 SLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERALKLFWTMQQQGV 661
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 27 VYTHQVFDEI---SHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPV 82
+ Q FD + S D+ + N+ + ++ R+ + LF M + TF V
Sbjct: 193 IDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSV 252
Query: 83 LGAC--SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF----KE 136
L +C + L + E + +H ++ G + E V+TAL+D Y K G L ++ E F E
Sbjct: 253 LDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKGDE 312
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+VT +A++S+ ++G +E+ +F AM E
Sbjct: 313 EPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLE 347
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV--HALMIKGGTDSEPVVKTALMDM 120
LF M+ + T VL ACS L V A+ + T + V+ T L+
Sbjct: 340 LFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSAT-RDNVLGTTLLTT 398
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
Y++ L + F I+ DVV+WNA+ +++L+H ++EA +F+ M E V
Sbjct: 399 YARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGV 451
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%), Gaps = 4/93 (4%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAFK 135
T+ +L AC L A ++G+++HA ++ D + + + L+ M++K G L E+ EA
Sbjct: 45 TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEA-EALA 103
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F V + A++ +++ HG +A +F M
Sbjct: 104 D-RFASVYSCTAMIRAWMEHGRPDKAMELFDRM 135
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 81/147 (55%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +H +F ++S D + NS + S++++ LF M + T + L
Sbjct: 494 RLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALS 553
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++LPA GK++H ++IKG ++ ++AL+DMY+K G + ++ F+ + K+ V+
Sbjct: 554 ACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVS 613
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN+++S++ HGL KE+ M E
Sbjct: 614 WNSIISAYGAHGLVKESVSFLHRMQEE 640
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 69/113 (61%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F Y+ C+ A T VL AC+++ A G+++H +++ + + V++ALMDMY+
Sbjct: 431 MFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYA 490
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
K G L S F ++ KD VTWN+++SSF ++G +EA +F+ M E +++
Sbjct: 491 KCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKY 543
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 64/138 (46%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D N + Y ++ + LF M + T L C+A
Sbjct: 199 FDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADL 258
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G Q+H+L +K G + E V L+ MY+K L ++ F+ + D+VTWN ++S
Sbjct: 259 LSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGC 318
Query: 153 LRHGLAKEAFGVFQAMTR 170
+++GL EA G+F M R
Sbjct: 319 VQNGLLDEALGLFCDMLR 336
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+ H + A+T V+ +C+AL A G+ VH G S+ V +AL+ MYS G
Sbjct: 131 WTHPAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAG 190
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
LL ++ +AF + ++D V WN ++ +++ G A +F+ M
Sbjct: 191 LLRDARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNM 233
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ + DL + N + ++ LFC M + + T +L A + L
Sbjct: 298 RLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLN 357
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++GK+VH +I+ + + +AL+D+Y K + + + DVV + ++S
Sbjct: 358 GLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVIS 417
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ +G++++A +F+ + + ++
Sbjct: 418 GYVLNGMSEKALQMFRYLLEQCIK 441
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 77/139 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ ++ N L ++ + + ++ LFC M + + +T+ +L C+
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H+L +K G +S+ V L+DMYSKYG L ++ + ++ KDVV+W ++++
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+++H K+A F+ M +
Sbjct: 421 YVQHECCKDALAAFKEMQK 439
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y ++ F+EI H D + N + + +S +F M
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + +TF L A + L ++GKQ+HA +IK G E V AL+ +Y K G +
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F E+ ++ V+WN +++S +HG EA +F M +E ++
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIK 645
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V + + D+ S S + Y + A F M + + C+ +
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G Q+HA + G + + AL+++Y++ G + E+ +F+EIE KD +TWN L+S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F + GL +EA VF M + V+
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVK 544
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ H D + N+ + + + + +F M + L+ T + +L AC++L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G Q+H+ + K G S+ +++ +L+D+Y K G + ++ F + +VV WN +L
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 151 SFLRHGLAKEAFGVFQAM 168
+F + ++F +F M
Sbjct: 319 AFGQINDLAKSFELFCQM 336
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA + G +V L+D+YSK GL+ + F+E+ +D V+W A+LS + ++G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 157 LAKEAFGVFQAMTRERV 173
L +EA G+++ M R V
Sbjct: 123 LGEEALGLYRQMHRAGV 139
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
LP R +VF+E+S D S + L Y ++ L+ MH + T Y +
Sbjct: 94 LPAR-----RVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL +C+ +G+ +HA K G SE V A++ +Y + G + F ++ +D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
VT+N L+S + G + A +F+ M
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEM 235
>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Glycine max]
Length = 916
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD IS ++ N+ L Y+++ LF M S ++ +T+T +L C+
Sbjct: 273 QVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFE 332
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+Q+H+ +IK S V AL+DMY+K G L E+ + F+ + ++D ++WNA++
Sbjct: 333 YLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIV 392
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++ + AF +F+ M + +
Sbjct: 393 GYVQEEVEAGAFSLFRRMILDGI 415
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL AC+ L + G+++H+L+ G D + + +AL+DMY+K G + SV+ F+E+
Sbjct: 624 TFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSALVDMYAKCGDVKSSVQVFEEL 683
Query: 138 EF-KDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KDV++WN+++ F ++G AK A VF MT+
Sbjct: 684 ATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQ 717
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N + + ++ ++ A F M + + T VL A ++L A G VHA IK
Sbjct: 186 NVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIK 245
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G +S V ++L++MY K + ++ + F I K+++ WNA+L + ++G +
Sbjct: 246 QGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMEL 305
Query: 165 FQAM 168
F M
Sbjct: 306 FLDM 309
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF L AC+ L G+ VH+ +IK G +S + AL+ +Y+K L + F
Sbjct: 48 FTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCARTIFAS 107
Query: 137 IEFKDV--VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F + V+W AL+S +++ GL EA +F M V
Sbjct: 108 APFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV 146
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ +++ D S N+ + Y + ++LF M + + +L AC +
Sbjct: 376 FEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVL 435
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+Q H L +K G ++ ++L+DMYSK G + ++ + + + + VV+ NAL++ +
Sbjct: 436 EAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGY 495
Query: 153 LRHGLAKEAFGVFQAM 168
KE+ + M
Sbjct: 496 ALKN-TKESINLLHEM 510
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 5/135 (3%)
Query: 31 QVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVF+E+ + D+ S NS + + ++ +F M +C+ TF VL ACS
Sbjct: 678 QVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPDDVTFLGVLTACSHA 737
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
G+Q+ +M+ EP V ++D+ ++G L E+ E ++E + + + W
Sbjct: 738 GWVYEGRQIFDVMVN-YYGIEPRVDHYACMVDLLGRWGFLKEAEEFIDKLEVEPNAMIWA 796
Query: 147 ALLSSFLRHGLAKEA 161
LL + HG K
Sbjct: 797 NLLGACRIHGDEKRG 811
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 67/162 (41%), Gaps = 13/162 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA H+ + + + S+N+ + Y +N + L M L
Sbjct: 467 CGDIKDA--------HKTYSSMPERSVVSVNALIAGYAL-KNTKESINLLHEMQILGLKP 517
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESVE 132
+ TF ++ C G Q+H ++K G SE + T+L+ MY L ++
Sbjct: 518 SEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGSE-FLGTSLLGMYMDSQRLADANI 576
Query: 133 AFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F E K +V W AL+S +++ + A +++ M +
Sbjct: 577 LFSEFSSLKSIVMWTALISGHIQNECSDVALNLYREMRDNNI 618
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 77/139 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ ++ N L ++ + + ++ LFC M + + +T+ +L C+
Sbjct: 301 IFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTRE 360
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H+L +K G +S+ V L+DMYSKYG L ++ + ++ KDVV+W ++++
Sbjct: 361 IDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAG 420
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+++H K+A F+ M +
Sbjct: 421 YVQHECCKDALAAFKEMQK 439
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y ++ F+E+ D + N + + +S +F M
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQ 540
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + +TF L A + L ++GKQ+HA +IK G E V AL+ +Y K G +
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F E+ ++ V+WN +++S +HG EA +F M +E ++
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIK 645
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V + + D+ S S + Y + A F M + + C+ +
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIN 460
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G Q+HA + G + + AL+++Y++ G + E+ +F+E+E KD +T N L+S
Sbjct: 461 AMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVS 520
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F + GL +EA VF M + V+
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVK 544
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ H D + N+ + + + + +F M + L+ T + +L AC++L
Sbjct: 199 RVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLG 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G Q+H+ + K G S+ +++ +L+D+Y K G + ++ F + +VV WN +L
Sbjct: 259 DLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLV 318
Query: 151 SFLRHGLAKEAFGVFQAM 168
+F + ++F +F M
Sbjct: 319 AFGQINDLAKSFELFCQM 336
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA + G +V L+D+YSK GL+ + F+E+ +D V+W A+LS + ++G
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 157 LAKEAFGVFQAMTRERV 173
L +EA G+++ M R V
Sbjct: 123 LGEEALGLYRQMHRAGV 139
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
LP R +VF+E+S D S + L Y ++ L+ MH + T Y +
Sbjct: 94 LPAR-----RVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL +C+ +G+ +HA K G SE V A++ +Y + G + F ++ +D
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRD 208
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
VT+N L+S + G + A +F+ M
Sbjct: 209 TVTFNTLISGHAQCGHGEHALEIFEEM 235
>gi|147817099|emb|CAN66439.1| hypothetical protein VITISV_035236 [Vitis vinifera]
Length = 2076
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ IS D + S + + N ++ M + + YTF ++ A S + A
Sbjct: 523 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHQMRQSGVMPDEYTFATLIKASSYVTA 582
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G+Q+HA +IK S+P V T+L+DMY+K G + + FK++ +++V WNA+L
Sbjct: 583 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDXYRLFKKMNVRNIVLWNAMLVG 642
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+HG A+EA +F++M +E
Sbjct: 643 IAQHGNAEEAVNLFKSMKSHGIE 665
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 67/145 (46%), Gaps = 5/145 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS-----RNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
QVFD DL + N+ L +Y S N LF + + + T T PVL
Sbjct: 140 QVFDTTPERDLVTWNAILGAYASSVDSNDGNAQEGLHLFRLLRESLGSTTRMTLAPVLKL 199
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
CS K VH IK G + V LM++YSK G + ++ F + +DVV W
Sbjct: 200 CSNSXCLWAAKGVHGYAIKIGLVWDVFVFGTLMNIYSKCGRMXDARLLFDGMRERDVVLW 259
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N +L +++ GL KEAF +F R
Sbjct: 260 NMMLKGYVQLGLEKEAFQLFSEFHR 284
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL+ N+ +F Y S + LF ++ + T AC L + GKQ+H
Sbjct: 430 DLACWNAMMFGYIISNDGNKALGLFSLINRSGEKSDQITLATAAKACGCLVLLDZGKQIH 489
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A +IK G S+ V + ++DMY K G + + F I D V W +++S + +G
Sbjct: 490 AHVIKAGFXSDLYVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNED 549
Query: 160 EAFGVFQAMTRERV 173
+A ++ M + V
Sbjct: 550 QALRIYHQMRQSGV 563
Score = 48.9 bits (115), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 62 ALFCYMHSTCLNLT--AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
A+ C+++ LN+ T VL A + R VHAL DS V TAL+D
Sbjct: 351 AIECFVNMNGLNVXYDXVTLLEVLAAVADGLNISRQIHVHALKTSNIADS--FVATALID 408
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+YS+ G + E+ F+ + D+ WNA++ ++ +A G+F + R
Sbjct: 409 VYSRSGKMEEAELLFQNKDDLDLACWNAMMFGYIISNDGNKALGLFSLINR 459
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL- 153
GK HA ++ GT + + L+ +YSK G L + + F +D+VTWNA+L ++
Sbjct: 103 GKCTHARIVVSGTAGDHFLTNNLLTLYSKCGSLSFACQVFDTTPERDLVTWNAILGAYAS 162
Query: 154 ----RHGLAKEAFGVFQAM 168
G A+E +F+ +
Sbjct: 163 SVDSNDGNAQEGLHLFRLL 181
>gi|359495958|ref|XP_003635122.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g47460-like [Vitis vinifera]
gi|297744381|emb|CBI37355.3| unnamed protein product [Vitis vinifera]
Length = 601
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H VF EI + S NS + Y + F A LF + + + A++FT L C L
Sbjct: 134 HNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICADAFSFTAALATCGHL 193
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H+ ++K G + VV L+DMY K G + E++ F I KD+++WN ++
Sbjct: 194 SLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIRVFDSIIDKDIISWNTVI 253
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S+ R+ ++AF + M
Sbjct: 254 SASARNRKLEQAFSYLRQM 272
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M S + + +TF+ +L + L A + G +H IK G D VV +AL+DMYSK
Sbjct: 331 FSKMQSKDIEMDRFTFSSILSGIAGLAALKWGVLIHCCTIKCGLDESIVVGSALIDMYSK 390
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
G + + F+ + K++VTWNA++S F +G E +F+ + ER
Sbjct: 391 CGQVKNAEMLFQSLPRKNLVTWNAMISGFAHNGNFTEVIKLFKQLKTER 439
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
AY ++ A + L G+Q+H+ +++ G S V TAL++ Y + L ++ F
Sbjct: 78 NAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFVSTALLNFYIRIESLKDAHNVF 137
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
EI VV+WN+L+S + G + A G+F + R +
Sbjct: 138 VEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDI 176
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 84/151 (55%), Gaps = 9/151 (5%)
Query: 32 VFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTA--YTFTPV 82
VFDEI+ D+ S NS + ++ + N LF M H N + + +
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNI 265
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC++L A + K++H+ I+ GT ++ V AL+D Y+K G + ++V+ F +EFKDV
Sbjct: 266 LPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDV 325
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WNA+++ + + G AF +F+ M +E +
Sbjct: 326 VSWNAMVTGYTQSGNFGAAFELFENMRKENI 356
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 4/99 (4%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP---VVKTALMDMYSKYGLLGESV 131
AYT + +L AC+ L A GKQ+HA + + + EP V L+DMYSK G + +
Sbjct: 511 NAYTISCILMACAHLAALRMGKQIHAYVTRH-HEYEPSVYFVANCLIDMYSKCGDVDTAR 569
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + ++ V+W +++S + HG KEA +F M +
Sbjct: 570 NVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK 608
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T L AC LP+ G+ +H L+ G +S V AL+ MYS+ G L ++ F E
Sbjct: 150 FTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDE 209
Query: 137 IEFK---DVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
I K DV++WN+++++ ++ + A +F M+
Sbjct: 210 ITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMS 245
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 82/203 (40%), Gaps = 57/203 (28%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA+ +VF+ + D+ S N+ + YT+S NF A + LF M + L
Sbjct: 307 CGSMNDAV--------KVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPL 358
Query: 75 TAYTFTPV-----------------------------------LGACSALPAPERGKQVH 99
T++ V L AC++L A +G ++H
Sbjct: 359 DVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIH 418
Query: 100 ALMIKGGTDS------------EPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTW 145
A +K S + +V AL+DMYSK + F I ++VVTW
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTW 478
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
++ + ++G + +A +F M
Sbjct: 479 TVMIGGYAQYGDSNDALKIFSEM 501
>gi|147773503|emb|CAN66782.1| hypothetical protein VITISV_013509 [Vitis vinifera]
Length = 625
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H VF EI + S NS + Y + F A LF + + + A++FT L C L
Sbjct: 158 HNVFVEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDICADAFSFTAALATCGHL 217
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H+ ++K G + VV L+DMY K G + E++ F I KD+++WN ++
Sbjct: 218 SLLRLGESIHSKIVKSGLEWSVVVANCLVDMYGKCGYVQEAIRVFDSIIDKDIISWNTVI 277
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S+ R+ ++AF + M
Sbjct: 278 SASARNRKLEQAFSYLRQM 296
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M S + + +TF+ +L + L A + G +H IK G D VV +AL+DMYSK
Sbjct: 355 FSKMQSKDIEMDRFTFSSILSGIAGLAALKWGVLIHCCTIKCGLDESIVVGSALIDMYSK 414
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
G + + F+ + K++VTWNA++S F +G E +F+ + ER
Sbjct: 415 CGQVKNAEMLFQSLPRKNLVTWNAMISGFAHNGNFTEVIKLFKQLKTER 463
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
AY ++ A + L G+Q+H+ +++ G S V TAL++ Y + L ++ F
Sbjct: 102 NAYALLHLVRASTNLGLIPFGQQLHSYILRSGFGSNVFVSTALLNFYIRIESLKDAHNVF 161
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
EI VV+WN+L+S + G + A G+F + R +
Sbjct: 162 VEIPEPSVVSWNSLISGYAHAGQFRAALGLFLKLERSDI 200
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 1430
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 10/160 (6%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
+C IADA +VF+ + +L S N+ L Y RS + LF M
Sbjct: 330 SCGRIADA--------KRVFEGMKERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETRE 381
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL--GESV 131
A T VL AC+ + +G++VHA IK G S P++K AL+ MYSK G L E +
Sbjct: 382 FDAITLGSVLSACTGILDIGKGEEVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERL 441
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+ +D +WN+L+S + RH +++ A M E
Sbjct: 442 LLFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE 481
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F I D S N+ + + + MH+ L AY+F L AC+A
Sbjct: 848 LFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKD 907
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G QVHAL+ K + + +AL+DMY+K E+ F+ + +++V+WN+L++
Sbjct: 908 SRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITC 967
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ ++G EA +F +M +
Sbjct: 968 YEQNGPVGEALVLFVSMMK 986
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
VF ++ ++ + N + +Y ++ LF + + T YT+ VL AC
Sbjct: 1079 AQMVFSQMVEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGN 1138
Query: 89 LPAPERGKQVHALMIKGG------TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+ + G+Q H ++K G +S+ V +L+DMY K G + + + F+ + +D
Sbjct: 1139 VADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN 1198
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+WNA++ ++G AK+A +F+ M
Sbjct: 1199 VSWNAMIVGHAQNGRAKDALHLFERM 1224
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ S D S NS + Y R A M S + TF+ L AC+ +
Sbjct: 443 LFEMGSERDSYSWNSLISGYERHSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFL 501
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G Q+HA MI+ G + + ++++ L+DMY K S+ F+ +DV+ WN+++
Sbjct: 502 LKQGMQIHAYMIRKGYEIDDILRSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFG 561
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
G + +F M ++ ++
Sbjct: 562 CAYSGKGEYGLDLFDEMQKQGIK 584
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + ++ S NS + Y ++ LF M T V+ AC+ L
Sbjct: 948 RVFEAMPERNIVSWNSLITCYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLA 1007
Query: 91 APERGKQVHALMIKGGTDSEP-VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G+QVHA ++K E V+ AL+DMY+K G + F + + VV+ +L+
Sbjct: 1008 ADREGRQVHARVVKSDRFREDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLI 1067
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ + R ++A VF M + V
Sbjct: 1068 TGYARSANVEDAQMVFSQMVEKNV 1091
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S+ADA ++FD + D S N+ + + +R+ + +LF M+S +
Sbjct: 97 ACGSVADA--------RELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIR 148
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL C+ +Q+H + K S ++ TAL+D+Y LL ++ A
Sbjct: 149 PKDATMASVLSCCAECLDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRA 208
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
F +I + ++WN ++ + G+ A +F
Sbjct: 209 FDDILEPNAISWNVIVRRYHLAGMGDMAVDMF 240
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C +ADA + FD+I + S N + Y + +F M S +
Sbjct: 198 NCFLLADA--------RRAFDDILEPNAISWNVIVRRYHLAGMGDMAVDMFFRMLSAGVR 249
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
YT + + AC A E G+ +HA +++ G + V+++++DMY+K G + +
Sbjct: 250 PLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHHVHVRSSVVDMYAKCGAMDAAQSL 309
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
F KD+V +++S G +A VF+ M +ER
Sbjct: 310 FNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGM-KER 347
>gi|242087911|ref|XP_002439788.1| hypothetical protein SORBIDRAFT_09g020050 [Sorghum bicolor]
gi|241945073|gb|EES18218.1| hypothetical protein SORBIDRAFT_09g020050 [Sorghum bicolor]
Length = 551
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 10 FPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
P + IS A + + Q+FD ++ D S NS + + ++ +F M
Sbjct: 365 MPFRNTISWAGMIAGNIGFVRQIFDRMTVKDTVSYNSFMTALVQTDQGSEAVEIFRSMLH 424
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
T VLG +L AP+ G+Q+H + IK G DS VV AL+ MY K G +
Sbjct: 425 ERELPNPPILTIVLGLGGSLGAPKLGQQIHTVAIKLGMDSGLVVANALVSMYFKCG-SAD 483
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S+ F +E +D+ TWN +++ + +HGL +EA ++Q M
Sbjct: 484 SLMVFYSMEERDIFTWNTIITGYAQHGLGREAIKMYQLM 522
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 60/140 (42%), Gaps = 9/140 (6%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +F+ + ++ S + Y W +F M + VL A
Sbjct: 171 VDARNLFELMPERNMVSWTVMISGYVLIEQHGKAWDMFHTMLCEGMPPEQPNLVSVLSAV 230
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
L P + +H L+ K G + + VV TAL+++Y+K +++A +D TW+
Sbjct: 231 RHLSEPGILESIHFLVHKTGFERDVVVSTALLNVYTK----DVNIKA-----LQDEYTWS 281
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
++++ G +AF V+Q
Sbjct: 282 TMIAALSEAGRIDDAFAVYQ 301
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 34/55 (61%)
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+TA++ +YG + ++ F +I +VV+WNA+++ ++++ + EA +F M
Sbjct: 311 RTAMLTGLGRYGRISDAKILFDQIPEPNVVSWNAMITGYMQNEMVDEAEEIFNRM 365
>gi|195614946|gb|ACG29303.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
Length = 504
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 78/142 (54%), Gaps = 2/142 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRN-FPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+E+ D+ + N+ + Y+++ + + M T TF VLGACS L
Sbjct: 223 IFNEMEGKDVVAYNAMVEGYSKTEETAEGSLEVLKAMQRAGFRPTVSTFVSVLGACSLLS 282
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+PE G+QVH K G + V +AL+DMY+K G + + F ++ ++V+TW +++
Sbjct: 283 SPELGEQVHCQGTKSGLVLDIKVGSALVDMYAKCGRVEDGRRIFNQMPERNVITWTSMID 342
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ ++GL+ EA +F M RER
Sbjct: 343 GYGKNGLSDEALQLFGEM-RER 363
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
++ HA ++ S+ ++ AL+D Y K G LG + + + VV ALL ++
Sbjct: 155 REAHARALRSVEQSDDILFAALVDAYVKSGSLGYARRVHGAMPVRSVVCSTALLVGCMKE 214
Query: 156 GLAKEAFGVFQAM 168
GL ++A +F M
Sbjct: 215 GLFEDAEAIFNEM 227
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +++F+ +S D+ S NS + +S N A +F M + + + + L
Sbjct: 491 RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ LP+ GK +H MIK S+ ++ L+DMY+K G L ++ FK ++ K++V+
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN+++++ HG K++ +F M +
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEK 637
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D N L Y + + F M ++ A TF VL C++
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+H L++ G D E +K +L+ MYSK G ++ + F+ + D VTWN ++S
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++ GL +E+ F M V
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGV 336
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 68/139 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+F + + D+ + + Y + + + +F ++ ++ T +L L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + G+++H +IK G D+ + A++DMY+K G + + E F+ + +D+V+WN+++
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + A +F+ M
Sbjct: 515 TRCAQSDNPSAAIDIFRQM 533
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 71/149 (47%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R+ ++F +S D + N + Y +S + F M S+ + A TF+ +L
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ S E KQ+H +++ + + +AL+D Y K + + F + DVV
Sbjct: 349 SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVV 408
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ A++S +L +GL ++ +F+ + + ++
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK- 140
+L ACS +GKQVHA +I + ++ MY+ G + + F ++ +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 141 -DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ WN+++SSF+R+GL +A + M
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKM 129
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLT--AYTFTPVLGACSALPAPERGKQVHALM 102
NS + S+ R N AL Y C ++ TF ++ AC AL + + +
Sbjct: 107 NSIISSFVR--NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTV 164
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
G D V ++L+ Y +YG + + F + KD V WN +L+ + + G
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 163 GVFQAMTRERV 173
F M +++
Sbjct: 225 KGFSVMRMDQI 235
>gi|347954544|gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
Length = 526
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + N+ LF M T + T V+ AC+
Sbjct: 174 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 233
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH + G S + AL+D+YSK G + + F+ + +KDV++WN L+
Sbjct: 234 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEVETACGLFEGLSYKDVISWNTLI 293
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 294 GGYTHMNLYKEALLLFQEMLR 314
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ +S+ D+ S N+ + YT + LF M + + T +L AC+ L A
Sbjct: 277 LFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGA 336
Query: 92 PERGKQVHALM---IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ G+ +H + +KG T++ ++ T+L+DMY+K G + + + F + + + +WNA+
Sbjct: 337 IDIGRWIHVYINKRLKGVTNASSLL-TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 395
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F HG A AF +F M + ++
Sbjct: 396 IFGFAMHGKANAAFDLFSKMRKNGID 421
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I +L N+ + S + + L+ M S L YTF
Sbjct: 36 DGLP----YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTF 91
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK---- 135
+L +C+ A G+Q+H ++K G D + V T+L+ MY + G L ++ + F
Sbjct: 92 PFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSH 151
Query: 136 ---------------------------EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
EI KDVV+WNA++S + G KEA +F+ M
Sbjct: 152 RDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM 211
Query: 169 TRERV 173
+ V
Sbjct: 212 MKTNV 216
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + LSS N+ +F + A + LF M ++ TF +L ACS
Sbjct: 379 QVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSG 438
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
+ G+ + M + + + M D+ GL E+ E + + + D V W +L
Sbjct: 439 MLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSL 498
Query: 149 LSSFLRH 155
L + H
Sbjct: 499 LKACKMH 505
>gi|297813281|ref|XP_002874524.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320361|gb|EFH50783.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 688
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++F + + D+ + + + +S + LF + L+ + + +L CS+L
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSSILKVCSSL 456
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQ+H L IK G SEPV TAL DMY K G + SV F + +DVV+W ++
Sbjct: 457 ASLGCGKQIHGLCIKKGYQSEPVTATALGDMYVKCGEIDNSVVLFDGMLERDVVSWTGII 516
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F ++G +EAF F M +E
Sbjct: 517 VGFGQNGRVEEAFQYFHKMINSEIE 541
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSA 88
H+VFDE++ ++ + + + YT L+ M S + ++ VL AC
Sbjct: 60 HKVFDEMTERNIVTWTTMVSGYTCDGKPSKAIELYRRMVESQEEAANEFIYSAVLKACGL 119
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + G V+ + K + V+ +++DM+ K G L E+ +FKEI + +WN L
Sbjct: 120 VGDIQLGSFVYERIGKENLKGDVVLMNSVVDMFVKNGRLSEANSSFKEILRPNSTSWNTL 179
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+S + + G+ +EA +F + + +
Sbjct: 180 ISGYCKAGMVEEAVSLFNRIPQPNI 204
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 4/125 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ I ++ S N L S + P M L L + L ACS
Sbjct: 195 LFNRIPQPNIVSWNC-LISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE---FKDVVTWNAL 148
GKQ+H ++K G +S P +AL+DMYS G L ++ + F + + V WN++
Sbjct: 254 LTMGKQLHGCVVKSGLESSPFALSALIDMYSNCGSLSDAADVFHQEKPALCNTVAVWNSM 313
Query: 149 LSSFL 153
LS FL
Sbjct: 314 LSGFL 318
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 63/126 (50%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS L + + A L ++ + L +YT + L C L G QVH+L++
Sbjct: 311 NSMLSGFLINEENEAALGLLLLLYKSDLCFDSYTLSGALKICINLVNLRLGLQVHSLVVV 370
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + + +V + L+D+++ G + E+ + F + KD++ ++ L+ ++ G AF +
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQEAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 165 FQAMTR 170
F+ + +
Sbjct: 431 FRELIK 436
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 46/89 (51%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + A +RG+ + A ++K G + ++ MY + LL ++ + F E+ +++VTW
Sbjct: 15 CGKIQAFKRGESIQAHIVKQGISQNVFLANNVISMYVDFRLLSDAHKVFDEMTERNIVTW 74
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S + G +A +++ M + E
Sbjct: 75 TTMVSGYTCDGKPSKAIELYRRMVESQEE 103
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+S + S N+ + Y +++F +++T TF+ LGAC++L
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G QVH L IK + V +L+DMY+K G + + F E+E DV +WNAL+S
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HGL ++A + M
Sbjct: 524 GYSTHGLGRQALRILDIM 541
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + + + ++ LF M + +T + +L C+
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H L++K G D + V AL+D+Y+K + +V+ F E+ K+ V+WN ++
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ G +AF +F+ R +V
Sbjct: 423 GYENLGEGGKAFSMFREALRNQV 445
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ I D+ + Y + F + L M YTF L A L A
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ K VH ++K +P V L+ +Y++ G + ++ + F E+ DVV W+ +++
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 152 FLRHGLAKEAFGVFQAM 168
F ++G EA +F M
Sbjct: 323 FCQNGFCNEAVDLFIRM 339
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L+ +H L + FT L +L E +H+ ++K G DS V AL++ Y
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S G + + F+ I KD+V W ++S ++ +G +++ + M
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
>gi|255540035|ref|XP_002511082.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550197|gb|EEF51684.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 274
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ D+ + NS + Y ++ F F M + + +TF V+ AC+ L
Sbjct: 99 KVFYKMPARDVVTWNSLIGGYVKNARFEEALRFFRVMLGSDIEPDKFTFASVITACARLG 158
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + + VH LMI+ + ++ +AL+DM+SK G + + E F+ ++ DV WN++++
Sbjct: 159 ALDNAQWVHDLMIQKRVELNCILSSALIDMFSKCGRIRTAKETFESVQRSDVSVWNSMIN 218
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
HGLA +A VF M E V
Sbjct: 219 GLAVHGLALDAISVFLKMEVENV 241
>gi|242091211|ref|XP_002441438.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
gi|241946723|gb|EES19868.1| hypothetical protein SORBIDRAFT_09g026705 [Sorghum bicolor]
Length = 771
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+FD S D S N+ + Y++S+ + LF M S + A +F L AC+
Sbjct: 469 AQDIFDR-SEKDDVSYNTLIVGYSQSQCCFESLHLFQQMRSAGIEYDAVSFMGCLSACAN 527
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A ++GK++H ++++ ++ P + +L+D+Y+K G+L + + F I KDV +WN +
Sbjct: 528 LSAFKQGKEIHGVLVRRLLNTHPFLANSLLDLYTKGGMLATASKIFNRITRKDVASWNTM 587
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + HG AF +F M + V++
Sbjct: 588 ILGYGMHGQIDVAFELFDLMKDDGVDY 614
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + + S NS L + + +F M + + T + +L A L
Sbjct: 269 RVFNGMQEKNEVSWNSALGCFAHAGFHEDVLEMFRVMSEHEVTPGSVTLSSLLPALVDLG 328
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK+VH I+ +S+ + +LMDMY+K+G L ++ F+ IE ++VV+WNA+++
Sbjct: 329 YFHLGKEVHGYSIRRAMESDIFIANSLMDMYAKFGCLEKASAIFENIEGRNVVSWNAMIA 388
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ ++G EAF + M +
Sbjct: 389 NLAQNGAETEAFSLVIEMQKN 409
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ D+ S NS + + + M + + + + V+ AC
Sbjct: 169 VFDEMPARDIVSWNSLVSALLTNGMLEDAKRAVVGMMRSGIPVNVASLVSVVPACGTERD 228
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G VH L++K G DS + AL+DMY K+G L S+ F ++ K+ V+WN+ L
Sbjct: 229 EGFGLSVHGLVLKSGLDSVVNLGNALVDMYGKFGDLESSMRVFNGMQEKNEVSWNSALGC 288
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
F G ++ +F+ M+ V
Sbjct: 289 FAHAGFHEDVLEMFRVMSEHEV 310
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ I ++ S N+ + + ++ ++L M ++T +L ACS + +
Sbjct: 371 IFENIEGRNVVSWNAMIANLAQNGAETEAFSLVIEMQKNGECPNSFTLVNLLPACSRVAS 430
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GKQ+HA I S+ V AL+D+Y+K G L + + F E KD V++N L+
Sbjct: 431 VKMGKQIHAWSIHRSLMSDLFVSNALIDVYAKCGQLSVAQDIFDRSE-KDDVSYNTLIVG 489
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+ + E+ +FQ M +E+
Sbjct: 490 YSQSQCCFESLHLFQQMRSAGIEY 513
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 1/127 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ I+ D++S N+ + Y + LF M ++ ++ VL ACS
Sbjct: 571 KIFNRITRKDVASWNTMILGYGMHGQIDVAFELFDLMKDDGVDYDHVSYIAVLSACSHGG 630
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALL 149
+RGK+ + MI + + ++D+ + G L ESVE + F + W ALL
Sbjct: 631 LVDRGKKYFSQMIAQNIKPQQMHYACMVDLLGRAGQLSESVEIITNMPFPANSDVWGALL 690
Query: 150 SSFLRHG 156
S HG
Sbjct: 691 GSCRIHG 697
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 92 PERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
P +G ++HA ++ G V L+ Y+ G ++ F E+ +D+V+WN+L+S
Sbjct: 127 PAKGAELHAAALRRGLLLADVFAGNTLVTFYAARGRAADARRVFDEMPARDIVSWNSLVS 186
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ L +G+ ++A M R +
Sbjct: 187 ALLTNGMLEDAKRAVVGMMRSGI 209
>gi|15231402|ref|NP_188004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273848|sp|Q9LRV9.1|PP228_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g13880
gi|9294611|dbj|BAB02912.1| probable selenium-binding protein [Arabidopsis thaliana]
gi|332641909|gb|AEE75430.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 748
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD D S NS + Y R L MH LNLT Y VL AC
Sbjct: 205 LFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLN 264
Query: 92 P---ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E+G +H K G + + VV+TAL+DMY+K G L E+++ F + K+VVT+NA+
Sbjct: 265 EGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAM 324
Query: 149 LSSFLRHG-----LAKEAFGVFQAMTRERVE 174
+S FL+ + EAF +F M R +E
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F S D++S S + + ++ + + LF + S+ + YT + ++ AC+
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+Q+ IK G D+ VKT+ + MY+K G + + + F E++ DV T++A++S
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533
Query: 151 SFLRHGLAKEAFGVFQAM 168
S +HG A EA +F++M
Sbjct: 534 SLAQHGSANEALNIFESM 551
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ Q+FD + ++ S NS + YT+ + LF L L +T+ LG C
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G+ +H L++ G + + L+DMYSK G L +++ F + +D V+WN+
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
L+S ++R G A+E + M R+
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRD 243
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%)
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
+ LF M L + TF+ VL ACSA E G+Q+HAL+ K S+ + +AL+++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y+ G + ++ F +D+ +W +++ +++ + AF +F+ +
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V + ++FD + D + N+ + +Y ++ +LF M ++ T T VL AC
Sbjct: 271 VSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSAC 330
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++ A + GKQ+ G + V TAL+DMY+K G L + F ++ K+ +WN
Sbjct: 331 ASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWN 390
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S+ HG AKEA +F+ M+ E
Sbjct: 391 AMISALASHGKAKEALSLFERMSDE 415
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VFDEI+ DL S NS L Y + +F + + + VLGAC L
Sbjct: 173 KVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGEL 232
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+ V +++ G + +AL+ MYSK G L S F + +D +TWNA +
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAI 292
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S++ ++G+A EA +F +M V+
Sbjct: 293 SAYAQNGMADEAISLFHSMKENGVD 317
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 24 KRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTP 81
K + Y+ +F I+ H + + N L + T + ++P T L+ M + ++ +TF
Sbjct: 63 KDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPF 122
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC+ L + H + K G D++ +++ MY + G G + + F EI KD
Sbjct: 123 VFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKD 182
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+V+WN+LLS + + G A+EA VF + E
Sbjct: 183 LVSWNSLLSGYAKLGFAREAVEVFGRLREE 212
>gi|449528126|ref|XP_004171057.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 415
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+QVFDE+S+ L S NS + Y R+ + LF M T +T +L CS
Sbjct: 143 YQVFDEMSNRTLVSWNSMIGGYFRNGLCKGAFLLFREMRETGFQPDKFTLVHLLSICSKS 202
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDM-YSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ GK VH + G + + +++ AL+D+ YSK+GL+ + E F +I K+V++WN++
Sbjct: 203 CRLDIGKSVHHYVEITGIEFDLILRNALLDIAYSKHGLIRHAREIFDQIPEKNVISWNSM 262
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+ +++ G KEA +FQ M +
Sbjct: 263 ILCYVQDGQCKEALLLFQQMCETTI 287
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD+I ++ S NS + Y + LF M T + T VL ACS
Sbjct: 243 HAREIFDQIPEKNVISWNSMILCYVQDGQCKEALLLFQQMCETTIIPDETTLVSVLSACS 302
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G++ H + + + +L+DMY K G L ++ F E + K++V+WN
Sbjct: 303 QIGDLAMGEKTHGCICRHSIVITVTLLNSLVDMYVKCGALETVLDFFFEFKDKNLVSWNI 362
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + HG +A +F M
Sbjct: 363 VIQALALHGHGLDALKLFNMM 383
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H VFD + + N + Y+ S + L+ M + +T VL +C+
Sbjct: 40 YAHLVFDHLPQPNKFMFNCLIRGYSTSPHPINAIFLYVQMMRSGFLPNRFTLPFVLKSCA 99
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ A VH I+ G S V AL++ Y+ +G + + + F E+ + +V+WN+
Sbjct: 100 SQLAYWEAFVVHCQAIRLGMLSHVYVHNALINAYAVFGFVQCAYQVFDEMSNRTLVSWNS 159
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + R+GL K AF +F+ M
Sbjct: 160 MIGGYFRNGLCKGAFLLFREM 180
>gi|225444117|ref|XP_002266487.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 553
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++S DL S NS + +Y ++++ LF M + + T VL AC++L
Sbjct: 262 IFDQMSVKDLVSWNSMIHAYVKAKHPKKAIELFRKMENEMVEPDETTMVSVLAACASLAD 321
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+ H +I+ + V TAL+DMY+K G L E++ F +++ +DV TW +
Sbjct: 322 LQNGRLAHRFIIQNNPRQDLFVGTALIDMYAKCGSLEEAMVTFYKMDSRDVFTWTTAIEG 381
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG +A +F M ++ ++
Sbjct: 382 LANHGHGDKALSLFTEMEKQGIK 404
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 9/161 (5%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ + +AL Y T QV FD + H DL+S N+ L +Y + N LF M
Sbjct: 109 VYVGNALLHLYGSTGQVTDARRLFDGMPHRDLASWNTLLGAY--NDNAVEVLVLFKRMMY 166
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + V AC + E GK+VH +IK G + AL+ +Y+K G +
Sbjct: 167 EGIGGDHISMVIVFSACGKIGGTEFGKEVHGYVIKVGIRPALSLSNALLGVYTKCGEMDA 226
Query: 130 SVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ F E+ +DVV+ L + ++ G A G+F M+
Sbjct: 227 AQSLFVEMAAMRDVVSHTILFNGYVDMGSIDLARGIFDQMS 267
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 2/97 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YT+ +L AC + + +GK+VHA + K G DS+ V AL+ +Y G + ++ F
Sbjct: 75 YTYPAMLKACWRMGSLSKGKEVHAHVTKTGLDSDVYVGNALLHLYGSTGQVTDARRLFDG 134
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ +D+ +WN LL ++ + A E +F+ M E +
Sbjct: 135 MPHRDLASWNTLLGAY--NDNAVEVLVLFKRMMYEGI 169
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 73/139 (52%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + DL S + Y ++ +L+C M + T VL ACS L A
Sbjct: 371 FNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAF 430
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
++G+Q+HA IK G E + +AL MY+K G L E F+ + +D+++WNA++S
Sbjct: 431 DQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGL 490
Query: 153 LRHGLAKEAFGVFQAMTRE 171
++G KEA +F+ M ++
Sbjct: 491 SQNGYGKEALELFEEMRQQ 509
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ D+L QVF+ + + + ++ + Y +S + LF MH +N
Sbjct: 260 CGSLDDSL--------QVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINP 311
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +T VL ACS A E GKQVH ++K G +S+ + TAL+DMY+K G+ ++ + F
Sbjct: 312 SEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGF 371
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ D+V W ++++ ++++G ++A ++ M E +
Sbjct: 372 NYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGI 410
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 11/168 (6%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA--LF 64
+ NF AK C LPK + VFD I + D+ S N + Y++ +++ LF
Sbjct: 49 LINFYAKCC-----HLPKAKL----VFDRIHNKDVISWNCLINGYSQQGPTGSSFVMELF 99
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M + + A+TF+ + A S L + G+Q HA+ IK + V ++L++MY K
Sbjct: 100 QRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVAIKMACFYDVFVGSSLLNMYCKA 159
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
GLL E+ E F + ++ VTW ++S + LA EAF VF+ M RE
Sbjct: 160 GLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREE 207
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 6/141 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + + + + Y R + +F M ++ + FT VL SAL
Sbjct: 167 EVFDRMPERNEVTWATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVL---SALA 223
Query: 91 APE---RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
PE GKQ+H L +K G + AL+ MY+K G L +S++ F+ K+ +TW+A
Sbjct: 224 VPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMYAKCGSLDDSLQVFEMSNDKNSITWSA 283
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+++ + + G + +A +F M
Sbjct: 284 MITGYAQSGDSHKALKLFSRM 304
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 93 ERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G+ +HA +IK + S + + +L++ Y+K L ++ F I KDV++WN L++
Sbjct: 24 QKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISWNCLING 83
Query: 152 FLRHGLAKEAF--GVFQAMTRERV 173
+ + G +F +FQ M + +
Sbjct: 84 YSQQGPTGSSFVMELFQRMRADNI 107
>gi|296089078|emb|CBI38781.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F ++ + D N+ + Y RS+N +L+ +M + + YT+ VL AC+
Sbjct: 63 YARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACA 122
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A + G++ H ++K G S+ V AL+ Y G G + + F E +DVVTWN
Sbjct: 123 RLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNI 182
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
++++ L GL+++AF + MT+
Sbjct: 183 MINAHLNKGLSEKAFDLLDEMTK 205
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 58/99 (58%), Gaps = 3/99 (3%)
Query: 78 TFTPVLGACSALPAPERGKQVHAL---MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T ++ AC+ L ERGK +H+ + K + + V++TAL+DMY+K G + +++ F
Sbjct: 215 TMVSLVPACAQLGNLERGKFLHSYSKELDKFEINCDLVLETALVDMYAKCGSIDLALQVF 274
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + ++V TWNAL+ HG ++A +F M +++
Sbjct: 275 RRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKL 313
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 32 VFDEISH---GDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTA--YTFTPV 82
VFDEI+ D+ S NS + ++ + N LF M H N + + +
Sbjct: 206 VFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNI 265
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC++L A + K++H+ I+ GT ++ V AL+D Y+K G + ++V F +EFKDV
Sbjct: 266 LPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDV 325
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WNA+++ + + G AF +F+ M +E +
Sbjct: 326 VSWNAMVTGYTQSGKFGAAFELFKNMRKENI 356
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 2/98 (2%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV--VKTALMDMYSKYGLLGESVE 132
AYT + +L AC+ L + GKQ+HA + + V V L+DMYSK G + +
Sbjct: 511 NAYTISCILMACAHLSSLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARN 570
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F + ++ V+W +++S + HG KEA +F M +
Sbjct: 571 VFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQK 608
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T L AC LP+ G H L+ G +S V AL+ MYS+ G L ++ F E
Sbjct: 150 FTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDE 209
Query: 137 IEFK---DVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
I K DV++WN+++++ ++ + A +F MT
Sbjct: 210 ITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMT 245
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 79/203 (38%), Gaps = 57/203 (28%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA+ VF+ + D+ S N+ + YT+S F A + LF M + L
Sbjct: 307 CGSMKDAV--------NVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPL 358
Query: 75 TAYTFTPV-----------------------------------LGACSALPAPERGKQVH 99
T++ V L AC++L A +G + H
Sbjct: 359 DVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQGMETH 418
Query: 100 ALMIKGGTDS------------EPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTW 145
A +K S + VV AL+DMYSK + F I ++VVTW
Sbjct: 419 AYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTW 478
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
++ + ++G + +A +F M
Sbjct: 479 TVMIGGYAQYGDSNDALKLFSEM 501
>gi|302790562|ref|XP_002977048.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
gi|300155024|gb|EFJ21657.1| hypothetical protein SELMODRAFT_106624 [Selaginella moellendorffii]
Length = 883
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 77/150 (51%), Gaps = 3/150 (2%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +VFD I + D+ NS + +Y + + L M + + TF +LG
Sbjct: 196 RLREAREVFDRIENKDVICWNSMIAAYAQGGHSAQARQLCEEMEGFGVKASDTTFAGILG 255
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS+L E GK++H+ + G S +V+ AL+ MY K L + F ++ DVV+
Sbjct: 256 ACSSL---EEGKKIHSRALARGLSSSIIVQNALISMYGKCNELDAARRVFSKVRAHDVVS 312
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
W AL+ ++ +HG +EA +++ M E +E
Sbjct: 313 WTALIVAYTQHGRNREALELYKQMEGEGME 342
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 83/154 (53%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA+ QVF + L S N + ++ ++R+ +F M S +
Sbjct: 93 CGSVDDAI--------QVFHALPRRSLFSWNFIIAAFAKNRHGRKAIEMFRSMDSAGIKP 144
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T + VLGACS+L E G+++H + G S VV+T L+ MY++ G L E+ E F
Sbjct: 145 DSATLSSVLGACSSLRDLEEGRRIHGRISSGEFQSGIVVETGLVKMYARCGRLREAREVF 204
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
IE KDV+ WN++++++ + G + +A + + M
Sbjct: 205 DRIENKDVICWNSMIAAYAQGGHSAQARQLCEEM 238
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + +Y + A L+ M L+ T + +L AC+ L E+G+QVH +I
Sbjct: 417 NAMITAYEQEGYSRAAVDLYDMMKQRGLDPDESTLSSILSACAELKDLEKGEQVHVEIIA 476
Query: 105 GGTDSE-PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
S+ PVV AL+ MY+ G + E+ FK ++ +DVV+W L+S++++ G
Sbjct: 477 SRDCSQNPVVLNALISMYASCGEIREAKAVFKRMKNRDVVSWTILISAYVQGG 529
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ D+ S + + +YT+ L+ M + TFT VL ACS
Sbjct: 300 RVFSKVRAHDVVSWTALIVAYTQHGRNREALELYKQMEGEGMEPDKVTFTSVLSACSNTN 359
Query: 91 APERGKQVHA-LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNAL 148
E G+ +HA L+ + S+ V+ AL++MY K G L S E F+ + K VV WNA+
Sbjct: 360 DLELGQALHARLLARKDGFSDGVLVAALINMYVKCGRLDLSSEIFQSCKDTKAVVVWNAM 419
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
++++ + G ++ A ++ M + ++
Sbjct: 420 ITAYEQEGYSRAAVDLYDMMKQRGLD 445
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 24 KRYVYTHQVFDEISHGDLSS--LNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
+R QVF ++ H + S+ N+ L +Y++ L+ M ST + TF
Sbjct: 598 RRLDLACQVFRQVRHLESSANCWNAMLAAYSQLGLPEEGIRLYWEMSSTGIKANEGTFAG 657
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
L ACS L A G ++H + S+ +KTAL+ MY+K + + F++++ D
Sbjct: 658 ALAACSMLGAVREGYRIHEQVSSSRYSSDLSLKTALVHMYAKCNRVDAAFHVFEQLQ-PD 716
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
VV WNA+++++ ++G A A ++ M
Sbjct: 717 VVAWNAMIAAYAQNGYAWHALELYSKM 743
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 52/91 (57%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ +L C A +G+++HA ++ G S+ + L+ MY K G + ++++ F +
Sbjct: 47 TYAALLKHCGNAAALPQGRRIHAHIVASGLASDGFLGDHLLQMYGKCGSVDDAIQVFHAL 106
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + +WN ++++F ++ ++A +F++M
Sbjct: 107 PRRSLFSWNFIIAAFAKNRHGRKAIEMFRSM 137
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 11/144 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + + D+ S + +Y + + L+ M + T T V+ ACSA+ +
Sbjct: 506 VFKRMKNRDVVSWTILISAYVQGGDARRALRLYRRMLVEGVQPTEVTMLAVIAACSAMES 565
Query: 92 PERGKQVHALMIKGGTDS----EPVVKTALMDMYSKYGLLGESVEAFKEIEF--KDVVTW 145
G +HAL TDS + V+ AL+ MY++ L + + F+++ W
Sbjct: 566 LWEGIVIHAL-----TDSMFFTDTAVQAALISMYARCRRLDLACQVFRQVRHLESSANCW 620
Query: 146 NALLSSFLRHGLAKEAFGVFQAMT 169
NA+L+++ + GL +E ++ M+
Sbjct: 621 NAMLAAYSQLGLPEEGIRLYWEMS 644
>gi|449460654|ref|XP_004148060.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 471
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+QVFDE+S+ L S NS + Y R+ + LF M T +T +L CS
Sbjct: 199 YQVFDEMSNRTLVSWNSMIGGYFRNGLCKGAFLLFREMRETGFQPDKFTLVHLLSICSKS 258
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDM-YSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ GK VH + G + + +++ AL+D+ YSK+GL+ + E F +I K+V++WN++
Sbjct: 259 CRLDIGKSVHHYVEITGIEFDLILRNALLDIAYSKHGLIRHAREIFDQIPEKNVISWNSM 318
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+ +++ G KEA +FQ M +
Sbjct: 319 ILCYVQDGQCKEALLLFQQMCETTI 343
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD+I ++ S NS + Y + LF M T + T VL ACS
Sbjct: 299 HAREIFDQIPEKNVISWNSMILCYVQDGQCKEALLLFQQMCETTIIPDETTLVSVLSACS 358
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G++ H + + + +L+DMY K G L ++ F E + K++V+WN
Sbjct: 359 QIGDLAMGEKTHGCICRHSIVITVTLLNSLVDMYVKCGALETVLDFFFEFKDKNLVSWNI 418
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + HG +A +F M
Sbjct: 419 VIQALALHGHGLDALKLFNMM 439
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H VFD + + N + Y+ S + L+ M + +T VL +C+
Sbjct: 96 YAHLVFDHLPQPNKFMFNCLIRGYSTSPHPINAIFLYVQMMRSGFLPNRFTLPFVLKSCA 155
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ A VH I+ G S V AL++ Y+ +G + + + F E+ + +V+WN+
Sbjct: 156 SQLAYWEAFVVHCQAIRLGMLSHVYVHNALINAYAVFGFVQCAYQVFDEMSNRTLVSWNS 215
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ + R+GL K AF +F+ M
Sbjct: 216 MIGGYFRNGLCKGAFLLFREM 236
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 77/145 (53%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V + ++FD + D + N+ + +Y ++ +LF M ++ T T VL AC
Sbjct: 271 VSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSAC 330
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++ A + GKQ+ G + V TAL+DMY+K G L + F ++ K+ +WN
Sbjct: 331 ASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWN 390
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S+ HG AKEA +F+ M+ E
Sbjct: 391 AMISALASHGKAKEALSLFERMSDE 415
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VFDEI+ DL S NS L Y + +F + + + VLGAC L
Sbjct: 173 KVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMSLVSVLGACGEL 232
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+ V +++ G + +AL+ MYSK G L S F + +D +TWNA +
Sbjct: 233 GDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAI 292
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S++ ++G+A EA +F +M V+
Sbjct: 293 SAYAQNGMADEAISLFHSMKENGVD 317
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 24 KRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTP 81
K + Y+ +F I+ H + + N L + T + ++P T L+ M + ++ +TF
Sbjct: 63 KDFTYSTLIFSHITPHPNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPF 122
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC+ L + H + K G D++ +++ MY + G G + + F EI KD
Sbjct: 123 VFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKD 182
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+V+WN+LLS + + G A+EA VF + E
Sbjct: 183 LVSWNSLLSGYAKLGFAREAVEVFGRLREE 212
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + N+ LF M T + T V+ AC+
Sbjct: 161 QKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVKPDESTMATVVSACAQS 220
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH+ + G S + AL+D+YSK G + + E + + KDV++WN L+
Sbjct: 221 GSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACELLEGLSNKDVISWNTLI 280
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 281 GGYTHMNLYKEALLLFQEMLR 301
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ + +S+ D+ S N+ + YT + LF M + T +L AC+ L
Sbjct: 263 ELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 322
Query: 91 APERGKQVHALM---IKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTW 145
A + G+ +H + +KG + ++T+L+DMY+K G + + + F + + TW
Sbjct: 323 AIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTW 382
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
NA++ F HG A AF +F M + +E
Sbjct: 383 NAMIFGFAMHGRANAAFDIFSRMRKNGIE 411
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I + N + S + + L+ M S L +TF
Sbjct: 23 DGLP----YAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTF 78
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK---- 135
+L +C+ + G+Q+H ++K G D + V T+L+ MY++ G L ++ + F
Sbjct: 79 PFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSH 138
Query: 136 ---------------------------EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
EI KDVV+WNA++S + G K+A +F+ M
Sbjct: 139 RDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEM 198
Query: 169 TRERVE 174
+ V+
Sbjct: 199 MKTNVK 204
>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 668
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 3/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR---SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
QVFDE+ D+ + S + Y++ + + LF M L + + ++ C
Sbjct: 147 QVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCCG 206
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GKQ+H K G V ++L+DMY++ G L ES F E+E K+ V+WNA
Sbjct: 207 FLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDELESKNEVSWNA 266
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
L+S F R G +EA G+F M RE
Sbjct: 267 LISGFARKGEGEEALGLFVKMQRE 290
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ + S N+ + + R LF M T +T++ +L + S +
Sbjct: 252 VFDELESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGS 311
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK +HA M+K G V L+ MY+K G + ++ + F + DVV+ N++L
Sbjct: 312 LEQGKWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIG 371
Query: 152 FLRHGLAKEAFGVFQAM 168
+ +HGL KEA +F+ M
Sbjct: 372 YAQHGLGKEAVELFEEM 388
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 3/96 (3%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ L ++GK VH ++ ++ V+K +++ MY+K G L + + F E+
Sbjct: 94 YNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGSLEIARQVFDEMC 153
Query: 139 FKDVVTWNALLSSFLRHGLAKE---AFGVFQAMTRE 171
KDVVTW ++++ + + G A A +F M R+
Sbjct: 154 VKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRD 189
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSAL 89
+VFD + D+ S NS L Y + LF M + TF VL ACS
Sbjct: 352 KVFDRLVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHA 411
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
+ G LM K G + + T ++D++ + GLL ++ +E+ + + W AL
Sbjct: 412 GLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGAL 471
Query: 149 LSSFLRH 155
L + H
Sbjct: 472 LGASKMH 478
>gi|302802387|ref|XP_002982948.1| hypothetical protein SELMODRAFT_155469 [Selaginella moellendorffii]
gi|300149538|gb|EFJ16193.1| hypothetical protein SELMODRAFT_155469 [Selaginella moellendorffii]
Length = 637
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 64/97 (65%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A +FT +GACSAL E+G +HA + G +++ + TAL++MY K GL + + F
Sbjct: 112 NAVSFTTAIGACSALGWIEKGTAIHARLAGTGLETDMGLATALVNMYGKRGLFDLATKVF 171
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + K VVTW+AL++++ +HG A+EAF +++ M RE
Sbjct: 172 ESMTAKTVVTWSALIAAYAQHGHAEEAFDLYRRMMRE 208
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F VL ACS + G+ +H + I ++ V+ TAL+D YS G L + AF I
Sbjct: 321 FASVLNACSTKKWSDDGRAIHRI-IPPRLEATAVIGTALVDFYSNCGDLANAKSAFARIV 379
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
KDV WNA++ + ++H L +EA +F M E
Sbjct: 380 DKDVAAWNAIIGACIQHRLYEEALEIFYRMNVE 412
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 72/142 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ ++ + + ++ + +Y + + + L+ M TF VL ACS +
Sbjct: 169 KVFESMTAKTVVTWSALIAAYAQHGHAEEAFDLYRRMMREGSKPNEVTFLSVLSACSTMR 228
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
ERG+++H+ ++ G D V+ ++ MY K L E+ E F + +D+ +W +++
Sbjct: 229 WLERGREIHSEIVNLGLDRSLVLMNTVLTMYIKCRSLDEAGEFFAAMASRDLKSWMFIIA 288
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ + G + A +F+++ E+
Sbjct: 289 ANAQQGRPERALALFRSLLEEK 310
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 74/144 (51%), Gaps = 2/144 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY-TFTPVLGACSALPA 91
F I D+++ N+ + + + R + +F M+ +L + TF +L AC+ P+
Sbjct: 375 FARIVDKDVAAWNAIIGACIQHRLYEEALEIFYRMNVEGCSLPNHRTFVALLEACTESPS 434
Query: 92 -PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G++++ ++ G + V+ T +++M++K G L + + F + KD+V+W A+++
Sbjct: 435 LGAAGRKLYERIVASGYELGLVLGTGIINMFAKLGSLDRARDVFARMPIKDLVSWTAIIA 494
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R G A ++ M + +E
Sbjct: 495 AHTRSGARVGARELYWMMALQGLE 518
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEA 133
A TF ++ AC + +RG+ +H ++ G D + A++ MY + G + E+ A
Sbjct: 9 NAITFLNLIVACGSSGDLKRGRILHNRIVSCGFDHHLANLGNAIVHMYGRSGSIAEARRA 68
Query: 134 FKEI--EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F I K V ++N++L +++ GL +EA +F M
Sbjct: 69 FLAIPSRLKSVASFNSMLRAYVLAGLQREAIDLFDQM 105
>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 624
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + S N+ + + R + F M T +T++ V + + L A
Sbjct: 209 VFDKLDSKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGA 268
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK L+DMY+K G + ++ + F ++ KD+VTWN +L++
Sbjct: 269 LEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTA 328
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
F ++GL KEA F+ M + +
Sbjct: 329 FAQYGLGKEAVSHFEEMRKSGI 350
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D+ S S + Y ++ L M +TF +L A A
Sbjct: 107 KVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHA 166
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+HAL +K + V +AL+DMY++ G++ + F +++ K+ V+WNAL+S
Sbjct: 167 DSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLDSKNGVSWNALIS 226
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F R G + A F M R E
Sbjct: 227 GFARKGDGETALMTFAEMLRNGFE 250
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T + + AC+ E ++VHA + + + +L+ +Y K G + E+ + F
Sbjct: 50 TPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCKCGSVLEARKVF 109
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
E+ KD+V+W +L++ + ++ + +EA G+ M + R
Sbjct: 110 DEMRRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGR 147
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 6/157 (3%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
+MT F T + + A + +VFD + DL + N+ L ++ + + F
Sbjct: 285 KMTAFAGNTLLDMY-AKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFE 343
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSK 123
M + + L TF +L ACS + GK+ +M + D EP + ++ + +
Sbjct: 344 EMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYFEMMKE--YDLEPEIDHFVTVVALLGR 401
Query: 124 YGLLGES-VEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
GLL + V FK W ALL++ H AK
Sbjct: 402 AGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAK 438
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEIS DL S NS + Y+R LF M T +LGAC L
Sbjct: 182 RVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLG 241
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G + +++ D V +AL+ MY K G L + F + KDVVTWNA+++
Sbjct: 242 DLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRVFDRMVKKDVVTWNAMIT 301
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G++ EA +F M V
Sbjct: 302 GYAQNGVSDEAIILFSGMRESGVN 325
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 79/141 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ + N+ + Y ++ LF M + +N T VL AC+++
Sbjct: 283 RVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITLVGVLSACASIG 342
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GK + + G ++ V TAL+DMY+K G L +++ F+++ K+ V+WNA++S
Sbjct: 343 ALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNAMIS 402
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ HG +E+ +F+ M++E
Sbjct: 403 ALAFHGRPQESLSLFKRMSKE 423
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%)
Query: 52 TRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP 111
T + F T + M + +T+ V AC+ L G+ H+ ++K G ++
Sbjct: 102 TTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADG 161
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V+ +L+ MYS+ G LG + F EI KD+V+WN+++S + R G A +A G+F M
Sbjct: 162 HVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAGDAVGLFGEM 218
>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
Length = 503
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ IS D + S + + N ++ M + + YTF ++ A S + A
Sbjct: 87 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 146
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G+Q+HA +IK S+P V T+L+DMY+K G + ++ FK++ +++ WNA+L
Sbjct: 147 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 206
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+HG A+EA +F++M +E
Sbjct: 207 LAQHGNAEEAVNLFKSMKSHGIE 229
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 58/126 (46%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
+F Y + LF +H + T AC L ++GKQ+HA IK G
Sbjct: 2 MFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGF 61
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
DS+ V + ++DMY K G + + F I D V W +++S + +G +A ++
Sbjct: 62 DSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHR 121
Query: 168 MTRERV 173
M + RV
Sbjct: 122 MRQSRV 127
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEI ++ S + + Y R++ LF M + + YT ++ AC+ +
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ +H IK + + TAL+DMYSK G + +++E F+ + K + TWN++++
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
S HGL +EA +F M R V+
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVK 355
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACS 87
+ +VFD + D S NS + Y +S +F M + A T + VL AC+
Sbjct: 1305 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 1364
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A GK +H +IK + V T+++DMY K G + + + F ++ K+V +W A
Sbjct: 1365 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 1424
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + HG AKEA +F M R V+
Sbjct: 1425 MVAGYGMHGRAKEALDIFYKMVRAGVK 1451
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC--------YMHSTCLNLTAYTFTPVL 83
+FDEI ++ S S + Y ++ LF + L + VL
Sbjct: 1199 LFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVL 1258
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS + + VH ++K G D V LMD Y+K G S + F +E KD +
Sbjct: 1259 SACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDI 1318
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTR 170
+WN++++ + + GL+ EA VF M R
Sbjct: 1319 SWNSMIAVYAQSGLSGEALEVFHGMVR 1345
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%)
Query: 36 ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERG 95
+ ++ S NS + R + F + L T +F + +CSAL G
Sbjct: 1102 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 1161
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+ H G +++ V +AL+DMYSK G L ++ F EI ++VV+W ++++ ++++
Sbjct: 1162 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 1221
Query: 156 GLAKEAFGVFQAMTRERVE 174
A A +F+ E E
Sbjct: 1222 EQADNALLLFKDFLEEETE 1240
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 62 ALFCYMHSTCLNLTA--YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
AL Y + C + A +TF V+ AC+ + + GK VH +IK G + V+ L+D
Sbjct: 109 ALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLID 168
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
Y K G +++ F+++ ++VV+W ++S + G +EA +F + + V
Sbjct: 169 FYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 44/74 (59%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+HA +I+ G ++ ++ L+ +YS +G + ++ F +I+ TWN ++ + +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 156 GLAKEAFGVFQAMT 169
GL+++A +++ M
Sbjct: 104 GLSEQALMLYKNMV 117
>gi|449442142|ref|XP_004138841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Cucumis sativus]
Length = 704
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + D S NS L +++ + F +M S +++ Y+F+ VL +CS L
Sbjct: 361 IFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLAT 420
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H L +K G +S V ++L+ MYSK G++ ++ +F+E +TWNAL+
Sbjct: 421 FQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFG 480
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A +F M ++V+
Sbjct: 481 YAQHGQCNVALDLFFLMEEKKVK 503
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ D S N+ + + N A+W + M S L YTF +L +
Sbjct: 55 LFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGM 114
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+QVH+++IK G +AL+DMY+K L ++ +F I + V+WNA+++
Sbjct: 115 FHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMING 174
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ + G + AF + M +E
Sbjct: 175 YAQAGDRETAFWLLDCMEQE 194
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + L M Y++T ++ AC G+ +H
Sbjct: 266 DLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLH 325
Query: 100 ALMIKGGTDSEPVVKTALMDMY--SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G + + AL+ MY S YG + E++ F+ +EFKD V+WN++L+ + G
Sbjct: 326 GLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGS 385
Query: 158 AKEAFGVFQAM 168
+++A F M
Sbjct: 386 SEDAVKSFLHM 396
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
F IS + S N+ + Y ++ + A W L C M + T+ P+L
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDRETAFWLLDC-MEQEGEKVDDGTYAPLLPLLDDADF 215
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWNALLS 150
Q+H +IK G + + AL+ YSK G L ++ F +D+VTWN+LL+
Sbjct: 216 CNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLA 275
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++L AF + M E
Sbjct: 276 AYLLRSQEDLAFKLLIDMQEHGFE 299
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+E S + N+ +F Y + LF M + + TF VL ACS +
Sbjct: 463 FEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEEKKVKMDHITFVAVLTACSHIGLV 522
Query: 93 ERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
E+G K + + G +D+Y + G L E+ +E+ FK D W L
Sbjct: 523 EQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLG 582
Query: 151 S 151
+
Sbjct: 583 A 583
>gi|255585042|ref|XP_002533229.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526949|gb|EEF29150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 575
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+FDE S L+S N+ + YT++ +LF M ++ T T +L AC+ L
Sbjct: 374 QLFDESSEKTLASWNAMIAGYTQNGATEKAISLFQEMQMYNISPNPVTVTSILSACAQLG 433
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK +H L+ + V TAL+DMY+K G + E+ F + K+ VTWNA++S
Sbjct: 434 ALTLGKWIHGLVKFKSFEYNVYVSTALIDMYAKCGSILEARRLFDSMPEKNEVTWNAIIS 493
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HGL +EA +F M
Sbjct: 494 GYGLHGLGQEALKLFYEM 511
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSAL 89
+VFD++ D N+ + R + + LF YM S + T VL A + L
Sbjct: 171 KVFDKLPERDTILYNTMISGLVRVCCYEDSIRLFKYMISGNGPQFDSTTVLAVLPALAEL 230
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G ++ L IK G S V T L+ +YSK G + + F +I KD++++NA++
Sbjct: 231 QELRLGTEIQCLAIKLGFLSHISVVTGLISLYSKCGDVDTASILFTDIGRKDLISYNAMI 290
Query: 150 SSFLRHGLAKEAFGVFQ 166
S +G + + +F+
Sbjct: 291 SGLTFNGETESSVRLFE 307
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H +K G S V TAL +YS+ + + + F E K + +WNA+++ + ++G
Sbjct: 340 IHGFGVKSGIVSHSSVATALTTVYSRLNEMEAARQLFDESSEKTLASWNAMIAGYTQNGA 399
Query: 158 AKEAFGVFQAM 168
++A +FQ M
Sbjct: 400 TEKAISLFQEM 410
>gi|242089513|ref|XP_002440589.1| hypothetical protein SORBIDRAFT_09g003570 [Sorghum bicolor]
gi|241945874|gb|EES19019.1| hypothetical protein SORBIDRAFT_09g003570 [Sorghum bicolor]
Length = 613
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 64/112 (57%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M +++ A + VLGA A GKQ+HAL+IK V L++MYS
Sbjct: 317 LFAEMVGKGIDIDANMVSAVLGAFGASAPFALGKQIHALVIKKCFGGNTYVCNGLINMYS 376
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G L ES+E F K+ VTWN+++++F RHG E FG+F++M + V+
Sbjct: 377 KCGELQESIEVFDGTPSKNTVTWNSIIAAFARHGHGSEVFGLFESMKADGVK 428
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 89/167 (53%), Gaps = 9/167 (5%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-H 68
+S+ +AL Y +VFD ++ ++ + + + R+ + + +LF M H
Sbjct: 164 VSVGNALITAYFECSSPGSAERVFDAMADRNVVTWTAMVSGMARAERYRESLSLFRQMRH 223
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ N +Y+ + L AC+ A G+Q+H L++K G +++ V++ LMDMYSK GL+
Sbjct: 224 AVDANRASYSSS--LLACAGSLAASEGQQIHGLVVKAGFETDLHVESELMDMYSKCGLME 281
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+++ F+ + D V +L F ++GL ++AF +F M + ++
Sbjct: 282 DALRVFRSCQDPDEVFLTVILVGFAQNGLEEKAFELFAEMVGKGIDI 328
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 78 TFTPVLGACSALPAPERGKQ-----VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
T T VL AC+ VH L + G D+E V AL+ Y + G +
Sbjct: 126 TLTTVLSACARADGGGGTGAASLPVVHGLAVSCGLDAEVSVGNALITAYFECSSPGSAER 185
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + ++VVTW A++S R +E+ +F+ M
Sbjct: 186 VFDAMADRNVVTWTAMVSGMARAERYRESLSLFRQM 221
>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
Length = 630
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D S + L +Y++ T LF M + F VL C+ + A
Sbjct: 214 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 273
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q+H +I+ G V AL+ MY K G + ++ AF+E+E +DVV+WN +++
Sbjct: 274 LECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 333
Query: 152 FLRHGLAKEAFGVFQAM 168
+ RHG KEA +F M
Sbjct: 334 YARHGFGKEALEIFDMM 350
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
F+E+ D+ S N+ + Y R +F M +T T VL ACS
Sbjct: 314 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 373
Query: 91 APERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E+G +++ G ++P T ++D+ + G L E+ + K++ F+ D W AL
Sbjct: 374 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 433
Query: 149 LSSFLRH 155
L + H
Sbjct: 434 LGASRIH 440
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 107 TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
T+ + + ALM Y ++G + E+ E F + +DVV+WN ++S + R G EA +F
Sbjct: 64 TEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD 123
Query: 167 A 167
A
Sbjct: 124 A 124
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ V ++ ++ +GL+ + F KD V+WN +L++++R+G +EA G+F + T
Sbjct: 5 DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 120 MYSKYGLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
M S Y G+ VEA F +DV TW A++S + ++G+ +EA VF AM
Sbjct: 105 MVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 156
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 94 RGKQVHALMIKGGTDSEPVVK----TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG V A + D+ PV TA++ Y++ G+L E+ F + ++ V+WNA++
Sbjct: 112 RGDMVEARRL---FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMV 168
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+++++ + EA +F M
Sbjct: 169 AAYIQRRMMDEAKELFNMM 187
>gi|255568940|ref|XP_002525440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535253|gb|EEF36930.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 878
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y ++ F++I D S N+ + + +S +F M
Sbjct: 628 LSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSGFAQSGYCEEALKIFAQMTR 687
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + +TF + A + + ++GKQ+HA+++K G DSE V AL+ +Y+K G +
Sbjct: 688 ANIKASLFTFGSAVSAAANMANIKQGKQIHAMIMKTGFDSEIEVSNALITLYAKCGCIDG 747
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F EI K+ ++WNA+++ + +HG EA +FQ M +
Sbjct: 748 AKREFFEIPEKNEISWNAMITGYSQHGCGIEAVNLFQKMKQ 788
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 81/144 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D S + + SY+++ LFC MH + L+ T Y F+ VL AC+ +
Sbjct: 245 KVFDELCMKDSVSWVAVISSYSQNGFGEEAIRLFCEMHISGLSPTPYVFSSVLSACAKIE 304
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+HAL+ K G E V AL+ +YS+ G + + F +I+ KD V++N+L+S
Sbjct: 305 LFDIGEQLHALVFKCGFFLETYVCNALVTLYSRLGNFISAQQVFSKIKCKDEVSYNSLIS 364
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ G + A +F+ M + ++
Sbjct: 365 GLSQQGCSDRALELFKKMQLDHLK 388
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+ ++ D+ S + + YT+ F LF M + + F+ + AC+ + A
Sbjct: 549 ILRRLNEEDVVSWTALIAGYTQHDLFTEALNLFDEMLNRGIQSDNIGFSSAISACAGIQA 608
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+G+Q+HA G + + AL+ +Y++ G + E+ AF++I+ KD ++WNAL+S
Sbjct: 609 LSQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRIQEANLAFEKIDAKDSISWNALMSG 668
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F + G +EA +F MTR ++
Sbjct: 669 FAQSGYCEEALKIFAQMTRANIK 691
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+ F ++ N L +Y + N ++ +F M L +T+ +L C++
Sbjct: 446 HKFFATTQTENVVLWNVMLVAYGQLDNLSKSFCIFRQMQIEGLIPNQFTYPSILRTCTSF 505
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + G+Q+H+ IK G + V + L+DMY+K G L + + + +DVV+W AL+
Sbjct: 506 GALDLGEQIHSQAIKTGFEFNVYVCSVLIDMYAKLGKLDIARGILRRLNEEDVVSWTALI 565
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ + +H L EA +F M ++
Sbjct: 566 AGYTQHDLFTEALNLFDEMLNRGIQ 590
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
++ QVF +I D S NS + ++ LF M L T +L
Sbjct: 340 NFISAQQVFSKIKCKDEVSYNSLISGLSQQGCSDRALELFKKMQLDHLKPDCVTVASLLS 399
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+++ + +G+Q+H+ IK G + +++ +L+D+Y K + + + F + ++VV
Sbjct: 400 ACASIKSLSKGEQLHSYAIKAGMCLDIIIEGSLLDLYVKCSDITTAHKFFATTQTENVVL 459
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN +L ++ + ++F +F+ M E
Sbjct: 460 WNVMLVAYGQLDNLSKSFCIFRQMQIE 486
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA-CSAL 89
+VFD++ L + N L ++ LF M +N T VL A S
Sbjct: 143 KVFDDMPSRSLMTWNKVLSGLVANKTSNRVLGLFAQMVEENVNPNEVTVASVLRAYGSGN 202
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +Q+HA +I G + + L+D+Y+K G + + + F E+ KD V+W A++
Sbjct: 203 VAFYYVEQIHASIISRGLGTSSIACNPLIDLYAKNGFIRSARKVFDELCMKDSVSWVAVI 262
Query: 150 SSFLRHGLAKEAFGVFQAM 168
SS+ ++G +EA +F M
Sbjct: 263 SSYSQNGFGEEAIRLFCEM 281
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
K++H+ ++K G D E V+ L++ Y G L V+ F ++ + ++TWN +LS + +
Sbjct: 107 KKLHSKILKIGFDKESVLCDKLIEFYFAVGDLNSVVKVFDDMPSRSLMTWNKVLSGLVAN 166
Query: 156 GLAKEAFGVFQAMTRERVE 174
+ G+F M E V
Sbjct: 167 KTSNRVLGLFAQMVEENVN 185
>gi|255541646|ref|XP_002511887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549067|gb|EEF50556.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 478
Score = 82.4 bits (202), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNF--PATWALFCYMHSTCLNLTAY---T 78
K + H++FDE++ ++ + N+ + N P + F Y L+ + T
Sbjct: 63 KEFKDAHKLFDEMTVRNVVTWNTVICGLVNCGNNYKPCLYTGFSYFKKMLLDEVGFDPIT 122
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ AC L E G+Q+H L++K G +V +AL+D+Y K GL E+ F ++
Sbjct: 123 LNVLFRACLELNGIEIGRQLHCLVVKLGFQLNCLVNSALVDLYGKCGLATEARCVFDDVM 182
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+KD+V WN +LS + + LA+EA VF+ M E +
Sbjct: 183 YKDLVLWNVMLSCYALNSLAEEALTVFKLMQLENL 217
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ + DL N L Y + +F M L +TF+ +L +C+ L +
Sbjct: 177 VFDDVMYKDLVLWNVMLSCYALNSLAEEALTVFKLMQLENLIGDGFTFSSMLNSCATLGS 236
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+Q+H L+ K D + +V + +++MY+K + ++ +AF + K+VV+WN ++ +
Sbjct: 237 WELGRQIHGLICKLSFDLDILVASGIVNMYAKNEYIEDARKAFDCMTAKNVVSWNTMVVA 296
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ R G KEA + + M E
Sbjct: 297 YGRQGDGKEAMKLLKEMLLE 316
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 67/143 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD ++ ++ S N+ + +Y R + L M T +L +C ++
Sbjct: 277 KAFDCMTAKNVVSWNTMVVAYGRQGDGKEAMKLLKEMLLEDFAPDELTLASILSSCGSVS 336
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A QVH ++K G S + A+++ YSK G ++++F + ++VTW +L+S
Sbjct: 337 ASCEIMQVHVYVVKFGLQSFLSIGNAMINAYSKCGRAASALKSFNSVPEPNLVTWTSLIS 396
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + L K+ +F+ M V
Sbjct: 397 GYAFNSLPKDGIKMFEKMLSAGV 419
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G QVHA ++K G + ++ ++D+Y K ++ + F E+ ++VVTWN ++
Sbjct: 31 QGGIQVHAHLVKLGLYNVLSLQNKILDVYVKCKEFKDAHKLFDEMTVRNVVTWNTVICGL 90
Query: 153 LRHG-----LAKEAFGVFQAMTRERVEF 175
+ G F F+ M + V F
Sbjct: 91 VNCGNNYKPCLYTGFSYFKKMLLDEVGF 118
>gi|449470352|ref|XP_004152881.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD++ DL + N+ + +++ + M S +++ +T ++ +C+ L
Sbjct: 161 QVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDIDGFTLVGLISSCAHLG 220
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G Q+H + G D V AL+DMY+K G L +++ F ++ KD+ TWN+++
Sbjct: 221 ALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIV 280
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG EA FQ M R++
Sbjct: 281 GYGVHGRGSEAIYCFQQMLEARIQ 304
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 89/173 (51%), Gaps = 12/173 (6%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
++ NF A IS++ +L Y +F ++ + NS + + +S + P +F
Sbjct: 41 KLLNFCA---ISVSGSLA----YAQLLFHQMECPQTEAWNSIIRGFAQSSS-PIDAIVF- 91
Query: 66 YMHSTCLNLT---AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
Y C + + +TF+ VL AC + A + K+VH +I+ G D++ +V T L+ YS
Sbjct: 92 YNQMVCDSFSIPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDADVIVCTNLVKCYS 151
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
G + + + F ++ +D+V WNA++S F + GL +EA + M E V+
Sbjct: 152 AMGSVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDI 204
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPVLGACSAL 89
+FD + D+ + NS + Y + + A++C+ M + TF +L CS
Sbjct: 263 IFDRMQRKDIFTWNSMIVGY--GVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQ 320
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G + LM +P VK L+D+Y + G L +++E D V W
Sbjct: 321 GLVQEGVKYFNLM-SSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSHNDSVLWRI 379
Query: 148 LLSSFLRH 155
LL S H
Sbjct: 380 LLGSCKIH 387
>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
Length = 1539
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 71/129 (55%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D S NS + Y + L +M L ++TF VL AC+++ ERG +VH
Sbjct: 1129 DEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVH 1188
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A I+ +S+ VV +AL+DMYSK G + + F+ + ++V +WN+++S + RHG +
Sbjct: 1189 ACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGE 1248
Query: 160 EAFGVFQAM 168
+A +F M
Sbjct: 1249 KALKLFTRM 1257
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ ++ S+N + + + A +F M + + + ++ +L A S
Sbjct: 811 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFS 869
Query: 91 APE----RGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
E +G++VHA +I+ G D++ + L++MY+K G + ++ F+ + KD V+W
Sbjct: 870 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 929
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N+L+S ++ +++A F M R
Sbjct: 930 NSLISGLDQNECSEDAAESFLRMRR 954
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC--S 87
++FDE+S+ +L + + YT++ A F M Y F L AC S
Sbjct: 599 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 658
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY-SKYGLLGESVEAFKEIEFKDVVTWN 146
+ G Q+H L+ K S+ VV L+ MY S ++ F I ++ ++WN
Sbjct: 659 GPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWN 718
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+++S + R G A+ +F +M +E + F
Sbjct: 719 SIISVYSRRGDXVSAYDLFSSMQKEGLGF 747
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 14 TCISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSR-NFPATWALFCY 66
T +S+++AL Y T +VF + D S NS + + + S + F
Sbjct: 994 TDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLE 1053
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M L+ TF +L A S+L E Q+HAL++K + + AL+ Y K G
Sbjct: 1054 MMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGE 1113
Query: 127 LGESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ E + F + E +D V+WN+++S ++ + L +A + M ++
Sbjct: 1114 MNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 1159
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK+ +IADA VF+ + D S NS + ++ F
Sbjct: 901 LVNMYAKSG-AIADAC--------SVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLR 951
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M T + +T L +C++L G+Q+H +K G D++ V AL+ +Y++ G
Sbjct: 952 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 1011
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSF 152
E ++ F + D V+WN+++ +
Sbjct: 1012 FTECLKVFSLMPEYDQVSWNSVIGAL 1037
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT----AYTFTPVL-GAC 86
VFD I + S NS + Y+R + + + LF M L + YTF ++ AC
Sbjct: 705 VFDRIGIRNSISWNSIISVYSRRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAAC 764
Query: 87 SALPAPERG----KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
S++ + G +Q+ A + K G + V +AL+ ++++GL ++ F+++ ++V
Sbjct: 765 SSV---DFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAKNIFEQMGVRNV 821
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+ N L+ ++ + A VF M
Sbjct: 822 VSMNGLMVGLVKQKQGEAAAKVFHEM 847
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ IS D + S + + N ++ M + + YTF ++ A S + A
Sbjct: 449 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 508
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G+Q+HA +IK S+P V T+L+DMY+K G + ++ FK++ +++ WNA+L
Sbjct: 509 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 568
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+HG A+EA +F++M +E
Sbjct: 569 LAQHGNAEEAVNLFKSMKSHGIE 591
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 11/169 (6%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A++L Y + +VF+++ H DL S NS + S +S + LF +
Sbjct: 321 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 380
Query: 70 TCLN-----LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
L L + T AC L ++GKQ+HA IK G DS+ V + ++DMY K
Sbjct: 381 EGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC 440
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G + + F I D V W +++S + +G +A ++ M + RV
Sbjct: 441 GDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRV 489
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 2/142 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC--SAL 89
+FD + D+ N L Y + + LF H + L ++ +L C +
Sbjct: 240 LFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGT 299
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E GKQVH + +K G DS+ V +L++MYSK G + E F +++ D+++WN+++
Sbjct: 300 DDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMI 359
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
SS + L +E+ +F + E
Sbjct: 360 SSCAQSSLEEESVNLFIDLLHE 381
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS-----RNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
QVFD DL + N+ L +Y S N LF + ++ + T T PVL
Sbjct: 133 QVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKL 192
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + VH IK G + + V AL+++YSK G + ++ F + +DVV W
Sbjct: 193 CLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLW 252
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N +L +++ GL KEAF +F R
Sbjct: 253 NMMLKGYVQLGLEKEAFQLFSEFHR 277
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL- 153
GK HA ++ G+ + + L+ MYSK G L + + F +D+VTWNA+L ++
Sbjct: 96 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 155
Query: 154 ----RHGLAKEAFGVFQAM 168
G A+E +F+ +
Sbjct: 156 SVDSNDGNAQEGLHLFRLL 174
>gi|347954482|gb|AEP33741.1| chlororespiratory reduction 21, partial [Thlaspi arvense]
Length = 732
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 85/167 (50%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI ++ + N+ + Y ++ LF M
Sbjct: 187 CVFVASSLADMYGKCGVLDEARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSDMR 246
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GKQ HA+ + G + + ++ T++++ Y K GL+
Sbjct: 247 KEGVEPTRVTVSTCLSASANMGGIEEGKQSHAIAVVNGLELDNILGTSILNFYCKVGLIE 306
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL ++A + Q+M E ++F
Sbjct: 307 CAEMIFDRMVEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKF 353
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 56/98 (57%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ V AC AL G+ VH ++K G V ++L DMY K G+L E+ + F E
Sbjct: 154 FVVPNVCKACGALQWSRFGRGVHGYVVKAGFHDCVFVASSLADMYGKCGVLDEARKVFDE 213
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I ++VV WNAL+ ++++G+ +EA +F M +E VE
Sbjct: 214 IPERNVVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVE 251
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ + N + Y + + M L T + ++ A +
Sbjct: 311 IFDRMVEKDVVTWNLLISGYVQQGLVEDAIRMCQSMRLENLKFDCVTLSTLMSAAARTQD 370
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK+V + I+ +S+ V+ + +DMY+K G + ++ + F KD++ WN LL +
Sbjct: 371 SKLGKEVQSYCIRHSLESDIVLASTAVDMYAKCGSIVDAKKVFDSTVQKDLILWNTLLGA 430
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ GL+ EA +F M E V
Sbjct: 431 YAESGLSGEALRLFYEMQLESV 452
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L ++ T L AC+ L + G+ +H +I+ V ++T+L+DMY+K G
Sbjct: 517 MQESGLRPNVFSITVALSACANLASLHYGRSIHGYIIRNQRHCSSVSIETSLVDMYAKCG 576
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ F+ + ++ +NA++S F +G KEA G+++++
Sbjct: 577 DINKAERVFRSKLYSELPLYNAMISGFAVYGNVKEAIGLYRSL 619
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEI ++ S + + Y R++ LF M + + YT ++ AC+ +
Sbjct: 212 RIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMG 271
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ +H IK + + TAL+DMYSK G + +++E F+ + K + TWN++++
Sbjct: 272 ILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMIT 331
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
S HGL +EA +F M R V+
Sbjct: 332 SLGVHGLGQEALNLFSEMERVNVK 355
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 1/147 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACS 87
+ +VFD + D S NS + Y +S +F M + A T + VL AC+
Sbjct: 2178 SKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAVLLACA 2237
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A GK +H +IK + V T+++DMY K G + + + F ++ K+V +W A
Sbjct: 2238 HAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTA 2297
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + HG AKEA +F M R V+
Sbjct: 2298 MVAGYGMHGRAKEALDIFYKMVRAGVK 2324
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC--------YMHSTCLNLTAYTFTPVL 83
+FDEI ++ S S + Y ++ LF + L + VL
Sbjct: 2072 LFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVL 2131
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS + + VH ++K G D V LMD Y+K G S + F +E KD +
Sbjct: 2132 SACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDI 2191
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTR 170
+WN++++ + + GL+ EA VF M R
Sbjct: 2192 SWNSMIAVYAQSGLSGEALEVFHGMVR 2218
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 66/139 (47%)
Query: 36 ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERG 95
+ ++ S NS + R + F + L T +F + +CSAL G
Sbjct: 1975 VDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSG 2034
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+ H G +++ V +AL+DMYSK G L ++ F EI ++VV+W ++++ ++++
Sbjct: 2035 RMSHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQN 2094
Query: 156 GLAKEAFGVFQAMTRERVE 174
A A +F+ E E
Sbjct: 2095 EQADNALLLFKDFLEEETE 2113
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 2/114 (1%)
Query: 62 ALFCYMHSTCLNLTA--YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
AL Y + C + A +TF V+ AC+ + + GK VH +IK G + V+ L+D
Sbjct: 109 ALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNNLID 168
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
Y K G +++ F+++ ++VV+W ++S + G +EA +F + + V
Sbjct: 169 FYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 44/74 (59%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+HA +I+ G ++ ++ L+ +YS +G + ++ F +I+ TWN ++ + +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 156 GLAKEAFGVFQAMT 169
GL+++A +++ M
Sbjct: 104 GLSEQALMLYKNMV 117
>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
gi|238013832|gb|ACR37951.1| unknown [Zea mays]
gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
Length = 745
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ ++ D + + + +T++ F M + + YTF +L AC AL
Sbjct: 227 RLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+HA +I+ D V +AL+DMYSK + + AF+ + K++++W AL+
Sbjct: 287 ALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPAETAFRRMSCKNIISWTALIV 346
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G ++EA VF M R+ ++
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGID 370
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F +S ++ S + + Y ++ +F M ++ +T V+ +C+ L +
Sbjct: 330 FRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASL 389
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G Q H L + G V AL+ +Y K G + ++ F E+ F D V+W AL++ +
Sbjct: 390 EEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALVTGY 449
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+ G AKE +F+ M + V+
Sbjct: 450 AQFGRAKETIDLFEKMLAKDVK 471
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 33/178 (18%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM----------------- 67
R+ +VFD H +L + N+ L + +R +LF M
Sbjct: 56 RHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTVSYNAVIAGFSG 115
Query: 68 ---HSTCLNL-------------TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP 111
H+ + L + T + ++ A SAL G+Q H +++ G
Sbjct: 116 GGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLGFGVNA 175
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
V + L+ MY+K GL+G++ F E++ K+VV +N +++ LR + +EA +F+ MT
Sbjct: 176 FVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMT 233
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA H++FDE+ D S + + Y + T LF M + +
Sbjct: 421 CGSIEDA--------HRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKP 472
Query: 75 TAYTFTPVLGACSALPAPERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
TF VL ACS E+G H++ G T ++D+YS+ G L E+ E
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEF 532
Query: 134 FKEIEFK-DVVTWNALLSS 151
K++ D + W LLS+
Sbjct: 533 IKQMPMHPDAIGWGTLLSA 551
>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
Length = 801
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP-- 90
FD I D+ S N+ +Y + LF M + + TF L AC+A P
Sbjct: 278 FDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGVRPSVATFITALTACAAYPPQ 337
Query: 91 -APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVTWNA 147
A GK++ +L+ + G + + V A ++MY+K G L ++ F+ I +D +TWN+
Sbjct: 338 TASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNS 397
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+L+++ HGL KEAF +FQAM E++
Sbjct: 398 MLAAYGHHGLGKEAFELFQAMEAEKL 423
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ ++ ACS L G+++H+ + + V+ AL+ MYSK G L ++ +AF
Sbjct: 8 HALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQAFDR 67
Query: 137 I---EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +DVVTWNA++S+FLR+G A+EA +F+ M +
Sbjct: 68 LPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHD 105
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 14/170 (8%)
Query: 9 NFPAKTCISIADALPKRYVYTHQVFDEIS--HGDLSSLNSQLFSYTRSRNFPATWALFCY 66
N AK C S+ADA VF+ IS D + NS L +Y + LF
Sbjct: 367 NMYAK-CGSLADA--------RAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQA 417
Query: 67 MHSTCL-NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M + L TF VL A ++ + +G+++HA ++ G +S+ V++ AL++MY+K G
Sbjct: 418 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCG 477
Query: 126 LLGESVEAFKEIEF--KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
L ++ F + +DV+ W +L++ + ++G A+ A +F M ++ V
Sbjct: 478 SLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGV 527
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 15 CISIADALPKRYVYTHQVFDEI---SHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HST 70
C S+ DA Q FD + S D+ + N+ + ++ R+ + LF M H
Sbjct: 55 CGSLIDA--------KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDG 106
Query: 71 CLNLTAYTFTPVLGAC--SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ TF VL +C + L + E + +H ++ G + E V+TAL+D Y K G L
Sbjct: 107 APPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLD 166
Query: 129 ESVEAF----KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ E F E +VT +A++S+ ++G +E+ +F AM E
Sbjct: 167 DAWEVFLRKSDEEPSTSLVTCSAMISACWQNGWPQESLRLFYAMNLE 213
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV--HALMIKGGTDSEPVVKTALMDM 120
LF M+ + T VL ACS LP V A+ + T + V+ T L+
Sbjct: 206 LFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFVLEQAMEVVSAT-RDNVLGTTLLTT 264
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
Y++ L + F I+ DVV+WNA+ +++L+H +EA +F+ M E V
Sbjct: 265 YARSNDLSRARATFDAIQSPDVVSWNAMAAAYLQHHRPREALVLFERMLLEGV 317
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 1/138 (0%)
Query: 38 HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQ 97
H +L + + Y ++ + +F M S + TF VL ACS + A GK+
Sbjct: 695 HKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKE 754
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRHG 156
+H L+IK G S +ALMDMYSK G + S E FKE++ K +++ WN+++ F ++G
Sbjct: 755 IHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNG 814
Query: 157 LAKEAFGVFQAMTRERVE 174
A EA +FQ M +++
Sbjct: 815 YANEALLLFQKMQESQLK 832
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + ++ N+ L+ + ++ T +F YM L +TF VLGAC L
Sbjct: 383 KVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLD 442
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G+QVH + IK D++ V A++DMYSK G + + F I KD V+WNAL+
Sbjct: 443 SLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIV 502
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +EA + + M
Sbjct: 503 GLAHNEEEEEAVYMLKRM 520
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 74/130 (56%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + SY++S + L+ M L T TF +L A +++ A + G+Q+HA +K
Sbjct: 296 NAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVK 355
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G D+ V ++L+++Y K+G + ++ + F K++V WNA+L F+++ L +E +
Sbjct: 356 HGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQM 415
Query: 165 FQAMTRERVE 174
FQ M R +E
Sbjct: 416 FQYMRRADLE 425
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+F + ACS + A E GKQ+H IK S V ++L+D+YSK+G + S + +
Sbjct: 531 SFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHV 590
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +V NAL++ +++ EA +FQ + ++
Sbjct: 591 DASSMVPINALITGLVQNNREDEAIELFQQVLKD 624
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ VL ACS L A E+G+QVH ++K G S + L+DMY+K + ++ F
Sbjct: 161 FGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDG 220
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I D + W ++++ + R G ++A +F M +
Sbjct: 221 IACPDTICWASMIAGYHRVGRYQQALALFSRMEK 254
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%)
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
M K G+ + V ++ + G L ++ K I+ V WNA++SS+ + GL E
Sbjct: 252 MEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEV 311
Query: 162 FGVFQAMTRE 171
FG+++ M R+
Sbjct: 312 FGLYKDMKRQ 321
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 36 ISHGDLSSL---NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
++H D SS+ N+ + ++ LF + + +TF +L C+ +
Sbjct: 587 LAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSS 646
Query: 93 ERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLS 150
GKQVH+ +K + + + +L+ +Y K LL ++ + E+ + K++V W A +S
Sbjct: 647 VIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATIS 706
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ ++G + ++ +F M V
Sbjct: 707 GYAQNGYSDQSLVMFWRMRSHDV 729
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 70/142 (49%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + S N+ + + R L M T +T++ VL AC+++ A
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGAL 306
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E+GK VHA MIK G + L+DMY+K G + ++ F + DVV+WN +L+
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGC 366
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+HGL KE F+ M R +E
Sbjct: 367 AQHGLGKETLDRFEQMLRIGIE 388
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D+ + + + ++++ LF M +T + +L A +
Sbjct: 144 RMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLKASGSEH 203
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+HA +K G S V +AL+DMY++ G + + AF + K V+WNAL+S
Sbjct: 204 GLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALIS 263
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
R G + A + M R+ +
Sbjct: 264 GHARKGEGEHALHLLWKMQRKNFQ 287
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
++ +L C+ L E+G+ VHA ++ D+ V++ +++MY+K G L ++ F E+
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KD+VTW AL++ F ++ ++A +F M R
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
>gi|449441075|ref|XP_004138309.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
TC+SI+DA Q+FDE+ + + N+ + YT +R F F M +
Sbjct: 136 TCLSISDA--------SQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQ 187
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ T VL ACS L A +GK +H + V TAL+DMY+K G + E +
Sbjct: 188 PSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKV 247
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+EI K+V TWN L+S + +G A F M E
Sbjct: 248 FEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLME 285
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + +Y + +F MH + + TF VL A + L GK +H ++I+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + TAL+ +Y + ++ + F E+ ++ VTWNAL++ + + +A
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 165 FQAM 168
F+ M
Sbjct: 178 FRGM 181
>gi|147818972|emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
Length = 1817
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 71/127 (55%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + Y+++ LF M + L T +T T +L AC +L ++G+QVH+L+ K
Sbjct: 1488 NSMISGYSQNLXGEEALKLFVZMRNNGLXPTDHTLTSILNACGSLTILQQGRQVHSLVAK 1547
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G++S V +AL+DMYSK G + E+ F + K+ V W ++++ + + G E G+
Sbjct: 1548 MGSESNVFVVSALLDMYSKCGSIDEARCVFXQAVEKNTVLWTSMITGYAQSGRGPEGLGL 1607
Query: 165 FQAMTRE 171
F+ + E
Sbjct: 1608 FERLVXE 1614
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M+++ T + L +C+ L G Q+HA +I+ G + + +AL+D+Y+K
Sbjct: 1304 FXRMNTSGTKPTKFILCTALNSCAKLLNWGLGVQIHARIIQTGFEDNLFLNSALVDLYAK 1363
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ F +E D V+W +++S F ++G KEA F+ M
Sbjct: 1364 CDAIVDAKRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEM 1408
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 9/155 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +I DA +VFD + D S S + ++++ F M + +
Sbjct: 1364 CDAIVDA--------KRVFDGMEKHDQVSWTSIISGFSKNGRGKEAILFFKEMLGSQIKP 1415
Query: 75 TAYTFTPVLGACSALPAP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T+ + AC+ L ++ +HA ++K G + V + L+D YSK G + ++V
Sbjct: 1416 NCVTYVSXISACTGLETIFDQCALLHAHVVKLGFGVKTFVVSCLIDCYSKCGRIDQAVLL 1475
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F +D + +N+++S + ++ +EA +F M
Sbjct: 1476 FGTTIERDNILFNSMISGYSQNLXGEEALKLFVZM 1510
>gi|449477559|ref|XP_004155057.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 562
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
TC+SI+DA Q+FDE+ + + N+ + YT +R F F M +
Sbjct: 136 TCLSISDA--------SQLFDEMPERNAVTWNALITGYTHNRKFVKAIDAFRGMLADGAQ 187
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ T VL ACS L A +GK +H + V TAL+DMY+K G + E +
Sbjct: 188 PSERTVVVVLSACSHLGAFNQGKWIHEFIYHNRLRLNVFVGTALIDMYAKCGAVYEVEKV 247
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+EI K+V TWN L+S + +G A F M E
Sbjct: 248 FEEIREKNVYTWNVLISGYAMNGQGDAALQAFSRMLME 285
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + +Y + +F MH + + TF VL A + L GK +H ++I+
Sbjct: 58 NSMIRTYLDLNKHLNSLYIFALMHKFSILPDSSTFPAVLKATAQLCDTGVGKMIHGIVIQ 117
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + TAL+ +Y + ++ + F E+ ++ VTWNAL++ + + +A
Sbjct: 118 MGFICDVYTSTALVHLYCTCLSISDASQLFDEMPERNAVTWNALITGYTHNRKFVKAIDA 177
Query: 165 FQAM 168
F+ M
Sbjct: 178 FRGM 181
>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S NS L YT++ +LF M ++ + T ++ ACS L +
Sbjct: 259 VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 318
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF--KDVVTWNALL 149
G+++H +I D + ++ A+MDMY K G L +VE F E +DV +WN L+
Sbjct: 319 KHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLI 378
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + HG KEA +F M E VE
Sbjct: 379 SGYGVHGHGKEALELFSRMQVEGVE 403
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ L +Y + L+ YM + + +T+ VL C++ G+ VH +++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G S+ V+ AL+DMY+K G +G++ E F + +DVV W A+++ + + +A +
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220
Query: 165 FQAMTRE 171
F+ M E
Sbjct: 221 FRKMQEE 227
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 35 EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPER 94
E+ D+SS N + Y + LF M + TFT +L ACS +
Sbjct: 365 ELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDE 424
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK--DVVTWNALLSSF 152
G++ A M K E ++DM + G L E+ K+I + D V W ALL +
Sbjct: 425 GRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLAC 483
Query: 153 LRHG 156
HG
Sbjct: 484 RIHG 487
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S NS L YT++ +LF M ++ + T ++ ACS L +
Sbjct: 290 VFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGS 349
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF--KDVVTWNALL 149
G+++H +I D + ++ A+MDMY K G L +VE F E +DV +WN L+
Sbjct: 350 KHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLI 409
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + HG KEA +F M E VE
Sbjct: 410 SGYGVHGHGKEALELFSRMQVEGVE 434
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 66/127 (51%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ L +Y + L+ YM + + +T+ VL C++ G+ VH +++
Sbjct: 101 NTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVR 160
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G S+ V+ AL+DMY+K G +G++ E F + +DVV W A+++ + + +A +
Sbjct: 161 TGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWTAMITLYEQAERPLKALML 220
Query: 165 FQAMTRE 171
F+ M E
Sbjct: 221 FRKMQEE 227
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA H+VFD + D+ + + Y ++ LF M
Sbjct: 180 CGEIGDA--------HEVFDRMLIRDVVCWTAMITLYEQAERPLKALMLFRKMQEEGFLG 231
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T V A L VH + G + V +++ MY+K G + + F
Sbjct: 232 DEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAKCGNVERARLVF 291
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+E ++ ++WN++LS + ++G +A +F M
Sbjct: 292 DRMEERNGISWNSMLSGYTQNGRPTDALSLFNQM 325
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Query: 35 EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPER 94
E+ D+SS N + Y + LF M + TFT +L ACS +
Sbjct: 396 ELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDE 455
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK--DVVTWNALLSSF 152
G++ A M K E ++DM + G L E+ K+I + D V W ALL +
Sbjct: 456 GRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEV-WGALLLAC 514
Query: 153 LRHG 156
HG
Sbjct: 515 RIHG 518
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 80/146 (54%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + + D+ NS + Y ++ F + LF MH + + + T T ++ AC +
Sbjct: 185 QRVFDGMPNKDVVCWNSIIGGYVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGI 244
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GK +H ++ G ++ +V T+ +DMYSK G + + F ++ +++V+WNA++
Sbjct: 245 GNLKLGKCMHGYVLGLGLGNDILVLTSFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMI 304
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S +R+GL E+F +F + R F
Sbjct: 305 SGCVRNGLVGESFDLFHRLVRSSGGF 330
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + ++ + + L ++ + LF M + + TF ++ +C+ L +
Sbjct: 388 VFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGS 447
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLS 150
+RG+ +H + + G + V TAL+DMY+K G + + F KDVV WN++++
Sbjct: 448 LKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMIT 507
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG +A G++ M E ++
Sbjct: 508 GYGMHGHGYQAVGIYHKMIEEGLK 531
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD+ N+ L Y +S + T LF M S L + + + T L AC++
Sbjct: 86 VFDQFFQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLD 145
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G ++ + ++ G + V ++++ K+G +GE+ F + KDVV WN+++
Sbjct: 146 YEMGMEIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGG 205
Query: 152 FLRHGLAKEAFGVFQAM 168
+++ G AF +F M
Sbjct: 206 YVQAGCFDVAFQLFFEM 222
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF ++ +L S N+ + R+ ++ LF + + T +L CS +
Sbjct: 288 VFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQGCSQTAS 347
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +H I+ +S ++ TA++D+YSK G L ++ F ++ ++V+TW A+L
Sbjct: 348 LATGKILHGCAIRS-FESNLILSTAIVDLYSKCGSLKQATFVFNRMKDRNVITWTAMLVG 406
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
++G A++A +F M E +
Sbjct: 407 LAQNGHAEDALRLFAQMQEEGI 428
>gi|302768953|ref|XP_002967896.1| hypothetical protein SELMODRAFT_89004 [Selaginella moellendorffii]
gi|300164634|gb|EFJ31243.1| hypothetical protein SELMODRAFT_89004 [Selaginella moellendorffii]
Length = 471
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 78/143 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD I+ ++ S + +Y ++ + A LF M +LG C+ L
Sbjct: 56 VFDRIADRNVFSWTLMIAAYAQNGHDAAALRLFREMDLHGEPADRIVLVEILGVCARLEL 115
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+G+ +HA ++ G D++ V TA+ +MY++ G L + E F +E K VV+WNA++++
Sbjct: 116 LAQGQTIHARIVALGFDADTVAATAIFNMYARCGFLRRARELFDRLEEKSVVSWNAMITA 175
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ R G A++A +F+ + +E +E
Sbjct: 176 YARTGQARQALDIFRRLDQEGIE 198
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 68/137 (49%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++FD + + S N+ + +Y R+ +F + + +++ +L A +
Sbjct: 154 ARELFDRLEEKSVVSWNAMITAYARTGQARQALDIFRRLDQEGIEADEMSYSGLLAAFAM 213
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ ++G+ +HA + G ++ V L++MY K G + E+ F + K++V+WN +
Sbjct: 214 RQSLDKGRILHARIKACGFEAMLQVANPLINMYGKCGCVEEARRIFDAVPSKNIVSWNTI 273
Query: 149 LSSFLRHGLAKEAFGVF 165
L+++ +G EA +F
Sbjct: 274 LAAYAGNGRVTEALDLF 290
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 74/144 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D+ S S + Y + + + +LF M L + T +L AC++L
Sbjct: 279 VFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLACASLNN 338
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+ +H ++K SE V+T+L+DMY+K LG S F K V WNALLS
Sbjct: 339 LKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPWNALLSG 398
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+ + LA EA G+F+ M E VE
Sbjct: 399 CVHNKLATEAIGLFKKMLMEGVEI 422
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + S N+ + Y ++ +F M + + + + VL AC L
Sbjct: 178 KVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLK 237
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G++VH L ++ + +V AL+DMY+K G + E+ F + +DVV+W ++++
Sbjct: 238 ELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMIN 296
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ +G AK A +F+ M E
Sbjct: 297 GYILNGDAKSALSLFKIMQIE 317
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 51/99 (51%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YT+ V+ ACS L E G+ +H L + S V +L+ MY G + E+ + F
Sbjct: 123 YTYPFVIKACSELLLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDA 182
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ K VV+WN +++ + ++G A A VF M VE
Sbjct: 183 MKEKSVVSWNTMINGYFKNGFANTALVVFNQMVDSGVEI 221
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LF M + + A T +L A L + +++ +++ G S V T+L+D+Y
Sbjct: 410 GLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNINSYLMRSGFVSNIQVATSLIDIY 469
Query: 122 SKYGLLGESVEAFKEI--EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
SK G L + + F I + +D+ W+ +++ + HG + A +F+ M + V+
Sbjct: 470 SKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGHGETAVSLFKQMVQSGVK 524
>gi|357482055|ref|XP_003611313.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
gi|355512648|gb|AES94271.1| hypothetical protein MTR_5g012660 [Medicago truncatula]
Length = 519
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%)
Query: 42 SSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHAL 101
SS NS + + P +F MH L + +TF+ +L ++L A G +H
Sbjct: 236 SSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNGIASLSALTWGMLIHCC 295
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
IK G DS VV ++L+DMYSK G + ++ F + +++V+WNA++ + R+G + +A
Sbjct: 296 TIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFNVLSNRNLVSWNAMIYGYARNGDSAQA 355
Query: 162 FGVFQAMTRER 172
+F+ + ER
Sbjct: 356 ISLFELLKMER 366
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
+ + H +F EI ++ S N+ + Y + F +LF + + + A++FT + A
Sbjct: 57 FTHAHNLFVEIPQPNVVSWNTLISGYVHAGQFKKALSLFTKLERSQICADAFSFTSAMVA 116
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ L + G +H+ +K G D+ VV L+DMY K G + +V F +I KDV++W
Sbjct: 117 CAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVERAVRIFSDIADKDVISW 176
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
N+++++ +G F Q M
Sbjct: 177 NSVIAACANNGNIGLGFKFLQLM 199
>gi|449477795|ref|XP_004155125.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g56550-like [Cucumis sativus]
Length = 579
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD++ DL + N+ + +++ + M S +++ +T ++ +C+ L
Sbjct: 161 QVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVDVDGFTLVGLISSCAHLG 220
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G Q+H + G D V AL+DMY+K G L +++ F ++ KD+ TWN+++
Sbjct: 221 ALNIGVQMHRFARENGLDQSLYVGNALIDMYAKCGSLDQAILIFDRMQRKDIFTWNSMIV 280
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG EA FQ M R++
Sbjct: 281 GYGVHGRGSEAIYCFQQMLEARIQ 304
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 90/172 (52%), Gaps = 12/172 (6%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
++ NF A IS++ +L Y +F ++ + NS + + +S + P +F
Sbjct: 41 KLLNFCA---ISVSGSLA----YAQLLFHQMECPQTEAWNSIIRGFAQSSS-PIDAIVF- 91
Query: 66 YMHSTCLNLT---AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
Y C + + +TF+ VL AC + A + K+VH +I+ G D++ +V T L+ YS
Sbjct: 92 YNQMVCDSFSIPDTFTFSFVLKACERIKAERKCKEVHGSVIRCGYDADVIVCTNLVKCYS 151
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
GL+ + + F ++ +D+V WNA++S F + GL +EA + M E V+
Sbjct: 152 AMGLVCIARQVFDKMPARDLVAWNAMISCFSQQGLHQEALQTYNQMRSENVD 203
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPVLGACSAL 89
+FD + D+ + NS + Y + + A++C+ M + TF +L CS
Sbjct: 263 IFDRMQRKDIFTWNSMIVGY--GVHGRGSEAIYCFQQMLEARIQPNPVTFLGLLCGCSHQ 320
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G + LM +P VK L+D+Y + G L +++E D V W
Sbjct: 321 GLVQEGVKYFNLM-SSKFRLKPEVKHYGCLVDLYGRAGKLDKALEIVSNSSHNDSVLWRI 379
Query: 148 LLSSFLRH 155
LL S H
Sbjct: 380 LLGSCKIH 387
>gi|359495686|ref|XP_003635058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g21065-like [Vitis vinifera]
Length = 540
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 80/146 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FDE+ D +S ++ + Y+++ T L M + ++ A+T V+G C
Sbjct: 120 YACVMFDEMPEPDSASWSTMVSGYSQNGQAVETLKLLREMQAENVSSDAFTLASVVGVCG 179
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GK VH+ + K G + V+ TAL+ MYSK G L +++ F+ + +DV TW+
Sbjct: 180 DLGVLDLGKWVHSYIDKEGVKIDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTTWSI 239
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ + HG ++A +F AM R ++
Sbjct: 240 MIAGYAIHGHDEKALQLFDAMKRSKI 265
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 72/146 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H +F H +L N+ + Y+ S + + AL+ M ++ +YTF VL AC
Sbjct: 19 YAHCIFSCTHHPNLFMWNTIIRGYSISDSPISAIALYKDMFLCGISPNSYTFGFVLNACC 78
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L G+++H+ ++K G D E + L+ +Y+ G + + F E+ D +W+
Sbjct: 79 KLLRLCEGQELHSQIVKAGLDFETPLLNGLIKLYAACGCMDYACVMFDEMPEPDSASWST 138
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++S + ++G A E + + M E V
Sbjct: 139 MVSGYSQNGQAVETLKLLREMQAENV 164
>gi|225456713|ref|XP_002267998.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 618
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 1/145 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y QVFD+I H D S + +Y+R F MH + + +T P+ +C+
Sbjct: 48 YARQVFDQIPHPDQGVHCSFITAYSRLSLNNEALRTFVSMHQNNVRIVCFTIPPIFKSCA 107
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+L A + GKQVH+L+I+ G S + AL++ Y+K LG + F I KD + +N
Sbjct: 108 SLLAIDVGKQVHSLVIRYGFHSSVFCQNALINFYAKINDLGSAELIFDGILVKDTIAYNC 167
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRER 172
L+S++ R G A +F M R+R
Sbjct: 168 LISAYSRSGEVLAARELFDKM-RDR 191
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 78/163 (47%)
Query: 12 AKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
A C+ A + + ++FD++ + S N+ + Y ++ ++ W +F M
Sbjct: 164 AYNCLISAYSRSGEVLAARELFDKMRDRSIVSWNAMISCYAQNGDYHKGWIIFQRMQDEM 223
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
T VL C+ L E G ++ L S +V TA+++MY K G + +
Sbjct: 224 CEPNEITLATVLSICAKLGDLEMGLRIKKLNDNKNLGSNMIVSTAMLEMYVKCGAVDDGR 283
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F + +DVVTW+A+++ + ++G + EA +F+ M +++
Sbjct: 284 LVFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIK 326
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD ++ D+ + ++ + Y ++ LF M S + T VL AC+ L +
Sbjct: 285 VFDHMARRDVVTWSAMIAGYAQNGRSNEALELFENMKSAQIKPNDVTLVSVLSACAQLGS 344
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+++ + + G S V +AL+ MYSK G + ++ + F ++ +D VTWN+++
Sbjct: 345 VETGERIGSYVESRGLISNVYVASALLGMYSKCGNIIKARQIFDKLPQRDNVTWNSMIMG 404
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+G A++A ++ M V+
Sbjct: 405 LAINGFAEDAIALYNRMKEIEVK 427
>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 755
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D S + L +Y++ T LF M + F VL C+ + A
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q+H +I+ G V AL+ MY K G + ++ AF+E+E +DVV+WN +++
Sbjct: 399 LECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 458
Query: 152 FLRHGLAKEAFGVFQAM 168
+ RHG KEA +F M
Sbjct: 459 YARHGFGKEALEIFDMM 475
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
F+E+ D+ S N+ + Y R +F M +T T VL ACS
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498
Query: 91 APERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E+G +++ G ++P T ++D+ + G L E+ + K++ F+ D W AL
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558
Query: 149 LSSFLRH 155
L + H
Sbjct: 559 LGASRIH 565
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 107 TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
T+ + + ALM Y ++G + E+ E F + +DVV+WN ++S + R G EA +F
Sbjct: 189 TEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 167 A 167
A
Sbjct: 249 A 249
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 88 ALPAPER---GKQVHALMI-------KGGTDSEPVVKTA----LMDMYSKYGLLGESVEA 133
A+P P+ +HAL + +G D PV + ++ ++ +GL+ +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F KD V+WN +L++++R+G +EA G+F + T
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 189
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 120 MYSKYGLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
M S Y G+ VEA F +DV TW A++S + ++G+ +EA VF AM
Sbjct: 230 MVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 94 RGKQVHALMIKGGTDSEPVVK----TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG V A + D+ PV TA++ Y++ G+L E+ F + ++ V+WNA++
Sbjct: 237 RGDMVEARRL---FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMV 293
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+++++ + EA +F M
Sbjct: 294 AAYIQRRMMDEAKELFNMM 312
>gi|145359106|ref|NP_199912.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635749|sp|Q9FI49.2|PP428_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g50990
gi|332008636|gb|AED96019.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 534
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V S ++ + N + Y R+ + A AL + T + ++F L AC+ L
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 178
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K VH+LMI G + ++ +AL+D+Y+K G +G S E F ++ DV WNA++
Sbjct: 179 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 238
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F HGLA EA VF M E V
Sbjct: 239 TGFATHGLATEAIRVFSEMEAEHV 262
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF + D+S N+ + + +F M + ++ + TF +L CS
Sbjct: 219 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 278
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E GK+ LM + + +P ++ A++D+ + G + E+ E + + + DVV W
Sbjct: 279 CGLLEEGKEYFGLMSRRFS-IQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 146 NALLSS 151
+LLSS
Sbjct: 338 RSLLSS 343
>gi|449493401|ref|XP_004159278.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g25970-like [Cucumis
sativus]
Length = 704
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + D S NS L +++ + F +M S +++ Y+F+ VL +CS L
Sbjct: 361 IFESLEFKDRVSWNSILTGLSQTGSSEDAVKSFLHMRSAAMDIDHYSFSAVLRSCSDLAT 420
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H L +K G +S V ++L+ MYSK G++ ++ +F+E +TWNAL+
Sbjct: 421 FQLGQQIHVLALKYGLESNEFVSSSLIFMYSKCGIIEDARRSFEEASKNSSITWNALMFG 480
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HG A +F M ++V+
Sbjct: 481 YAQHGQCNVALDLFFLMEXKKVK 503
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ D S N+ + + N A+W + M S L YTF +L +
Sbjct: 55 LFDEMPMRDSVSWNTMIAGHINCGNLEASWDVLRCMRSCGFELDRYTFGSMLKGIAFAGM 114
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+QVH+++IK G +AL+DMY+K L ++ +F I + V+WNA+++
Sbjct: 115 FHLGQQVHSIIIKMGYAENVYAGSALLDMYAKCEKLEDAYLSFLSISKHNTVSWNAMING 174
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ + G + AF + M +E
Sbjct: 175 YAQAGDRETAFWLLDCMEQE 194
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + NS L +Y + L M Y++T ++ AC G+ +H
Sbjct: 266 DLVTWNSLLAAYLLRSQEDLAFKLLIDMQEHGFEPDLYSYTSIISACFNENISNNGRSLH 325
Query: 100 ALMIKGGTDSEPVVKTALMDMY--SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
L+IK G + + AL+ MY S YG + E++ F+ +EFKD V+WN++L+ + G
Sbjct: 326 GLVIKRGFEQSVPISNALISMYLKSDYGSMKEALCIFESLEFKDRVSWNSILTGLSQTGS 385
Query: 158 AKEAFGVFQAM 168
+++A F M
Sbjct: 386 SEDAVKSFLHM 396
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 3/144 (2%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
F IS + S N+ + Y ++ + A W L C M + T+ P+L
Sbjct: 157 FLSISKHNTVSWNAMINGYAQAGDRETAFWLLDC-MEQEGEKVDDGTYAPLLPLLDDADF 215
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWNALLS 150
Q+H +IK G + + AL+ YSK G L ++ F +D+VTWN+LL+
Sbjct: 216 CNLTSQLHGKIIKHGLELVNTMCNALITSYSKCGSLDDAKRIFDSSAGIRDLVTWNSLLA 275
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++L AF + M E
Sbjct: 276 AYLLRSQEDLAFKLLIDMQEHGFE 299
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 2/121 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+E S + N+ +F Y + LF M + + TF VL ACS +
Sbjct: 463 FEEASKNSSITWNALMFGYAQHGQCNVALDLFFLMEXKKVKMDHITFVAVLTACSHIGLV 522
Query: 93 ERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
E+G K + + G +D+Y + G L E+ +E+ FK D W L
Sbjct: 523 EQGCKFLRCMESDYGVPPRMEHYACAVDLYGRSGRLEEAKALIEEMPFKPDTTVWKTFLG 582
Query: 151 S 151
+
Sbjct: 583 A 583
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
+ M +F A + +S+ K + Y F+ + + N+ L Y+++ +LF
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPF-YGRTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLF 606
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M S L +LGACS L A GK+VH +K + V +LMDMY+K
Sbjct: 607 RQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
G LG S F + K+V +WN +++ F HG +A +F+ M R
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKR 712
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT--AYTFTPVLGACSA 88
++FD++ +L S NS + ++ + + + F + + L T +L CS
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ G +H + +K G E +V AL+DMYSK G L E+ F++IE K VV+WN++
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
+ ++ R G E F + + M E
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEE 409
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSALP 90
VFD + + +L N+ + Y R+ + F + S T +TF ++ AC+
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH + +K G + V A++ +Y K G L E+VE F ++ +++++WN+L+
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIR 284
Query: 151 SFLRHGLAKEAFGVFQAM 168
F +G EA+ F+++
Sbjct: 285 GFSENGFWLEAYRAFRSL 302
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV--LG 84
V+ VF ++ +SS N+ + + ++N AL Y T L + F+ V L
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGH--AQNGDPIKALDFYFEMTRLGILPDDFSIVSLLL 525
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC L + GK++H +++ G + V +L+ +Y F+ + K+ V
Sbjct: 526 ACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGDKNSVC 585
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WNA+LS + ++ L EA +F+ M + +E
Sbjct: 586 WNAMLSGYSQNELPNEALSLFRQMLSDGLE 615
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 82 VLGACSALPAPERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L C E G+++ ++ + + V+ T L+ MYS G ES F + K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVF 165
++ WNAL+S ++R+ L EA F
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTF 197
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALF--CYMHSTCLNLTAYTFTPVLGACSAL 89
+F +I + + S NS + +Y+R T+ L +M + + T +L AC
Sbjct: 370 LFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +H ++ + ++ A + Y+K G L + F + K V +WNA++
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI 489
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
++G +A + MTR
Sbjct: 490 GGHAQNGDPIKALDFYFEMTR 510
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + N+ LF M T + T VL AC+
Sbjct: 189 QKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQS 248
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH+ + G S + AL+D+Y K G + + F+ + +KDV++WN L+
Sbjct: 249 ASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLI 308
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 309 GGYTHMNLYKEALLLFQEMLR 329
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ I +AL Y+ +V F+ +S+ D+ S N+ + YT + LF M
Sbjct: 270 LKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 329
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLL 127
+ + T +L AC+ L A + G+ +H + K G + ++T+L+DMY+K G +
Sbjct: 330 SGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDI 389
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F + + + +WNA++ F HG A AF +F M ++ +E
Sbjct: 390 EAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIE 436
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 31/178 (17%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD I +L N+ + S + + L+ M S L +YTF +L AC+
Sbjct: 55 YAISVFDSIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACA 114
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK------------------------ 123
A G+Q+H ++K G D + V T+L+ MY K
Sbjct: 115 KSKAFREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTA 174
Query: 124 -------YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G + + + F EI KDVV+WNAL+S + G KEA +F+ M + V+
Sbjct: 175 LIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFD + + LSS N+ +F + + +F M + TF +L ACS
Sbjct: 393 QQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHS 452
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ + M + + + M D+ GL E+ E +E D V W +
Sbjct: 453 GMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCS 512
Query: 148 LLSSFLRHG 156
LL + HG
Sbjct: 513 LLKACKMHG 521
>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 83/149 (55%), Gaps = 3/149 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA--YTFTPVLGA 85
YT Q+F + + D S + S ++S NF + ++L+ Y N++ YTFT V+ +
Sbjct: 62 YTRQIFLAVPNPDSFLFTSLIKSTSKSHNF-SIYSLYFYSRMVLSNVSPSNYTFTSVIKS 120
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ L A + G+ VH ++ G + V+ AL+ +Y K G L + + F +I + +V W
Sbjct: 121 CADLSALKHGRVVHGHVLVHGFGLDVYVQAALVALYGKCGDLINARKVFDKIRERSIVAW 180
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
N+++S + ++G AKEA G+F M VE
Sbjct: 181 NSMISGYEQNGFAKEAIGLFDRMKETGVE 209
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+I + + NS + Y ++ LF M T + + TF VL AC+ L
Sbjct: 167 KVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLG 226
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G VH ++ G D V+ T+L++MY + G + ++ E F ++ ++VV W A++S
Sbjct: 227 AFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKAREVFDSMKERNVVAWTAMIS 286
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ +G +A +F M R
Sbjct: 287 GYGTNGYGSQAVELFHEMRRN 307
>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
Length = 755
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D S + L +Y++ T LF M + F VL C+ + A
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q+H +I+ G V AL+ MY K G + ++ AF+E+E +DVV+WN +++
Sbjct: 399 LECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 458
Query: 152 FLRHGLAKEAFGVFQAM 168
+ RHG KEA +F M
Sbjct: 459 YARHGFGKEALEIFDMM 475
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
F+E+ D+ S N+ + Y R +F M +T T VL ACS
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498
Query: 91 APERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E+G +++ G ++P T ++D+ + G L E+ + K++ F+ D W AL
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558
Query: 149 LSSFLRH 155
L + H
Sbjct: 559 LGASRIH 565
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 107 TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
T+ + + ALM Y ++G + E+ E F + +DVV+WN ++S + R G EA +F
Sbjct: 189 TEWDAISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 167 A 167
A
Sbjct: 249 A 249
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 88 ALPAPER---GKQVHALMI-------KGGTDSEPVVKTA----LMDMYSKYGLLGESVEA 133
A+P P+ +HAL + +G D PV + ++ ++ +GL+ +
Sbjct: 94 AIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLARHY 153
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F KD V+WN +L++++R+G +EA G+F + T
Sbjct: 154 FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 189
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 120 MYSKYGLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
M S Y G+ VEA F +DV TW A++S + ++G+ +EA VF AM
Sbjct: 230 MVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 94 RGKQVHALMIKGGTDSEPVVK----TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG V A + D+ PV TA++ Y++ G+L E+ F + ++ V+WNA++
Sbjct: 237 RGDMVEARRL---FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMV 293
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+++++ + EA +F M
Sbjct: 294 AAYIQRRMMDEAKELFNMM 312
>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 970
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD + L S N+ + Y ++ FP +F M + L + PV GACS LP
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 611
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G++ HA +K + + + +L+DMY+K G + +S + F ++ K +WNA++
Sbjct: 612 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 671
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ HGLAKEA +F+ M R
Sbjct: 672 GYGIHGLAKEAIKLFEEMQR 691
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSALP 90
VFD + +L N+ + SY+R+ + F M ST L +T+ V+ AC+ +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G VH L++K G + V AL+ Y +G + ++++ F + +++V+WN+++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F +G ++E+F + M E
Sbjct: 262 VFSDNGFSEESFLLLGEMMEE 282
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF I ++S N+ + + +S + + M + L ++T +L ACS
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GK+VH +I+ + + V +++ +Y G L F +E K +V+WN
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 148 LLSSFLRHGLAKEAFGVFQAMT 169
+++ +L++G A GVF+ M
Sbjct: 568 VITGYLQNGFPDRALGVFRQMV 589
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL C+ GK VH +K D E V+ ALMDMYSK G + + FK
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+VV+WN ++ F G F V + M
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 93 ERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+++H L + G T ++ V+ T ++ MY+ G +S F + K++ WNA++S
Sbjct: 101 EMGRKIHQL-VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 151 SFLRHGLAKEAFGVFQAM 168
S+ R+ L E F M
Sbjct: 160 SYSRNELYDEVLETFIEM 177
>gi|242057857|ref|XP_002458074.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
gi|241930049|gb|EES03194.1| hypothetical protein SORBIDRAFT_03g026520 [Sorghum bicolor]
Length = 963
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 20/152 (13%)
Query: 39 GDLSSLNSQLFSYTRSRNFPATW---------------ALFCY---MHSTCLNLTAYTFT 80
GD++S LFS R +W A+ C +HS + + TF+
Sbjct: 598 GDMNSC-EHLFSNMSGRRDAVSWNSMISGYIYNGYLQEAMDCVWLMLHSGQI-MDCCTFS 655
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L AC+++ A ERG ++HA I+ +S+ VV++AL+DMYSK G + + + F + +
Sbjct: 656 IILNACASVAALERGMEMHAFGIRSHLESDVVVESALVDMYSKCGRVDYASKLFNSMTQR 715
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ +WN+++S + RHGL ++A F+ M R R
Sbjct: 716 NEFSWNSMISGYARHGLGRKALETFEEMLRSR 747
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRN-FPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ ++ D S NS + S+ T +F M L TF +L A S L
Sbjct: 503 KVFNSMADHDEVSWNSMMGVMASSQAPISETVEVFNNMMRGGLIPNKVTFVNLLAALSPL 562
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNAL 148
E GKQ HA ++K G + VV AL+ Y+K G + F + +D V+WN++
Sbjct: 563 SVLELGKQFHAAVLKHGVMDDNVVDNALISCYAKSGDMNSCEHLFSNMSGRRDAVSWNSM 622
Query: 149 LSSFLRHGLAKEAF 162
+S ++ +G +EA
Sbjct: 623 ISGYIYNGYLQEAM 636
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A +PE +H +IK G + + + L++ Y+K L + F E+ ++ V+W
Sbjct: 75 AANSPE---NLHVELIKRGLNHDLFLSNHLVNSYAKGARLAAASRVFDEMPQRNAVSWTC 131
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
LLS ++ G+ +EAF VF+AM RE
Sbjct: 132 LLSGYVLQGITEEAFRVFRAMLRE 155
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS----TCLNLTAYTFTPV 82
+ +VFD DL + N+ + Y + + +T+ LF M L T +TF +
Sbjct: 220 ILAQRVFDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQREDSRIQLRPTEHTFGSL 279
Query: 83 LGACSALPAPERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+ A S QV ++K G S+ V +AL+ ++++GL+ E+ + F ++ K+
Sbjct: 280 ITATSLSSGSSAVLDQVFVSVLKSGCSSDLYVGSALVSAFARHGLIDEAKDIFLSLKEKN 339
Query: 142 VVTWNALLSSFLRHGLAKEAFGVF 165
VT N L+ ++ ++EA +F
Sbjct: 340 AVTLNGLIVGLVKQHCSEEAVKIF 363
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 5/89 (5%)
Query: 74 LTAYTFTPVLGACSALPAPE----RGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLG 128
+ A T+ +L A + PE +GK+ H M++ G TD + V L++MY+K G +
Sbjct: 372 VNADTYVVLLSAIAEYSIPEEGLRKGKEAHGHMLRTGLTDLKIAVSNGLVNMYAKCGAID 431
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+ + F+ +E D ++WN ++S+ ++GL
Sbjct: 432 SASKIFQLMEATDRISWNTIISALDQNGL 460
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 66/158 (41%), Gaps = 15/158 (9%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYT----RSRNFPATWALFCYMHSTCLNLTAYTFT 80
R +VFDE+ + S L Y F A+ + C T++TF
Sbjct: 110 RLAAASRVFDEMPQRNAVSWTCLLSGYVLQGITEEAFRVFRAMLREVEPGC-RPTSFTFG 168
Query: 81 PVLGACSALPAPER---GKQVHALMIKGGTDSEPVVKTALMDMYSKYG----LLGESVEA 133
+L AC P+R QVH L+ K S V AL+ MY +L + V
Sbjct: 169 TLLRACQD-GGPDRLGFATQVHGLLSKTEYASNTTVCNALISMYGSCTVGPPILAQRV-- 225
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F +D++TWNAL+S + + G F +F M RE
Sbjct: 226 FDGTPIRDLITWNALMSVYAKKGDVVSTFTLFMDMQRE 263
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL- 153
G+QVH +K G D + V L+ MY + G + + + F + D V+WN+++
Sbjct: 466 GQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDCWKVFNSMADHDEVSWNSMMGVMAS 525
Query: 154 RHGLAKEAFGVFQAMTR 170
E VF M R
Sbjct: 526 SQAPISETVEVFNNMMR 542
>gi|356558692|ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Glycine max]
Length = 696
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 69/125 (55%)
Query: 46 SQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG 105
S L S+ R + T LF M + + + A VL C+ + + GK++H ++KG
Sbjct: 238 SLLSSHARCGLYDETLELFKVMRTRGIEIGAEALAVVLSVCADMAEVDWGKEIHGYVVKG 297
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
G + VK AL+ Y K+ +G++ + F EI+ K++V+WNAL+SS+ GL EA+ F
Sbjct: 298 GYEDYLFVKNALIGTYGKHQHMGDAHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAF 357
Query: 166 QAMTR 170
M +
Sbjct: 358 LHMEK 362
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 41/187 (21%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-----------------STC 71
H+VF EI + +L S N+ + SY S +A F +M S
Sbjct: 322 AHKVFLEIKNKNLVSWNALISSYAESGLCDEAYAAFLHMEKSDSDDHSLVRPNVISWSAV 381
Query: 72 LNLTAY------------------------TFTPVLGACSALPAPERGKQVHALMIKGGT 107
++ AY T + VL C+ L A G+++H I+
Sbjct: 382 ISGFAYKGRGEKSLELFRQMQLAKVMANCVTISSVLSVCAELAALNLGRELHGYAIRNMM 441
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+V L++MY K G E F IE +D+++WN+L+ + HGL + A F
Sbjct: 442 SDNILVGNGLINMYMKCGDFKEGHLVFDNIEGRDLISWNSLIGGYGMHGLGENALRTFNE 501
Query: 168 MTRERVE 174
M R R++
Sbjct: 502 MIRARMK 508
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
+T V+ ACS+L + + VH ++ G + V L+ MY K G + ++ + F
Sbjct: 132 GFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMEDARQLFD 191
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + +V+WN ++S + L +++ G + R +E
Sbjct: 192 GMFVRSIVSWNTMVSGY---ALNRDSLGASRVFKRMELE 227
>gi|347954470|gb|AEP33735.1| chlororespiratory reduction 21, partial [Olimarabidopsis pumila]
Length = 811
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 6/169 (3%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ C+ +A +L Y +VFDEI ++ + N+ + Y ++ LF
Sbjct: 185 EDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSD 244
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T T + L A + + E GKQ HA+ I G + + ++ T+L++ Y K GL
Sbjct: 245 MRKEGVEPTRVTVSTCLSASANMVGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGL 304
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + F + KDVVTWN L+S +++ GL ++A + Q M E++++
Sbjct: 305 IEYAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKY 353
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH +IK G + V ++L DMY K G+L ++ + F EI ++
Sbjct: 159 VCKACGALQWSRFGRGVHGYVIKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERN 218
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VV WNAL+ ++++G+ +EA +F M +E VE
Sbjct: 219 VVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVE 251
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T + ++ A +
Sbjct: 307 YAEMVFDRMFDKDVVTWNLLISGYVQQGLVEDAIYMSQLMRLEKLKYDCVTLSTLMSAAA 366
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ D++ V+ + MDMY+K G + ++ + F KD++ WN
Sbjct: 367 RTENLKFGKEVQCYCIRHSLDTDIVLASTTMDMYAKCGSIVDAKKVFDSTVEKDLILWNT 426
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ + GL+ EA +F M E V
Sbjct: 427 LLAAYAQSGLSGEALRLFYEMQLESV 452
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L A++ T L A + L + G+ +H +I+ S V ++T+L+DMY+K G
Sbjct: 517 MQESGLRPNAFSITVALSASANLASLHFGRSIHGYIIRNLRHSSSVSIETSLVDMYAKCG 576
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ F + ++ +NA++S++ +G KEA +++++
Sbjct: 577 DINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAIALYRSL 619
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 95 GKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GKQ+HA ++K G ++T L+ Y+K L + F ++ ++V +W A++
Sbjct: 69 GKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEXAEVIFSKLRVRNVFSWAAIIGVK 128
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
R GL + A F M +
Sbjct: 129 CRIGLCEGALMGFVEMLENEI 149
>gi|115456651|ref|NP_001051926.1| Os03g0852700 [Oryza sativa Japonica Group]
gi|113550397|dbj|BAF13840.1| Os03g0852700, partial [Oryza sativa Japonica Group]
Length = 506
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 28 YTHQVFDEI----SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
Y H +FD + + D N + Y R AL+ M + +TFT L
Sbjct: 116 YAHHLFDHLLPARAREDAFPWNCLIAGYARLGRHEDALALYLQMEEETVPRDRFTFTSAL 175
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+ + + E G +H +++ G S+ V AL+D+Y+ +G + +++ F + +D V
Sbjct: 176 QACAGVGSVELGHAIHRDVVRAGLASDVPVCDALVDLYATFGDVRRALQVFDAMPDRDGV 235
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+WN +L+ LRHGL+++A +++ M RE E
Sbjct: 236 SWNIMLAGCLRHGLSQQALELWRRMLREEHE 266
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G ++HA I+ G ++E V AL+ MYS ++ F+ + +D+ +WNA++S+ L+
Sbjct: 289 GLEIHAWAIRHGLETELSVANALIRMYSDKNEQSHALLVFESMTMRDLQSWNAIISAHLQ 348
>gi|9758246|dbj|BAB08745.1| unnamed protein product [Arabidopsis thaliana]
Length = 511
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V S ++ + N + Y R+ + A AL + T + ++F L AC+ L
Sbjct: 96 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 155
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K VH+LMI G + ++ +AL+D+Y+K G +G S E F ++ DV WNA++
Sbjct: 156 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 215
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F HGLA EA VF M E V
Sbjct: 216 TGFATHGLATEAIRVFSEMEAEHV 239
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF + D+S N+ + + +F M + ++ + TF +L CS
Sbjct: 196 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 255
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E GK+ LM + + +P ++ A++D+ + G + E+ E + + + DVV W
Sbjct: 256 CGLLEEGKEYFGLMSRRFS-IQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 314
Query: 146 NALLSS 151
+LLSS
Sbjct: 315 RSLLSS 320
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ Q+FDE L+S N+ + YT++ +LF M L+ T T +L AC+
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACA 426
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A GK VH L+ +S V TAL+DMY+K G + E+ + F + K+VVTWNA
Sbjct: 427 QLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ + HG KEA +F M + +
Sbjct: 487 MITGYGLHGHGKEALKLFYEMLQSGI 512
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+I DL S N+ + YT + + LF + ++ + + T ++
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ + + L +K G +P V TAL +Y + + + + F E K + +WNA++S
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++GL A +FQ M
Sbjct: 391 YTQNGLTDRAISLFQEM 407
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D N+ + ++R+ F + +F M L+ + T VL A + L
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G + L K G S+ V T L+ +YSK G + F +I+ D++++NA++S
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMIS 288
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + + A +F+ +
Sbjct: 289 GYTFNHETESAVTLFREL 306
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH---STCLNLTAYTFTPVLG 84
+ Q+F+++S DL N + + S N ++F Y H T L +T+ +
Sbjct: 64 HVRQLFNKVSKPDLFLFNVLIRGF--SDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAIS 121
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A S L G +HA I G S V +A++D+Y K+ + + F + +D V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN ++S F R+ +++ VF M
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDM 205
>gi|302776320|ref|XP_002971335.1| hypothetical protein SELMODRAFT_94945 [Selaginella moellendorffii]
gi|300161317|gb|EFJ27933.1| hypothetical protein SELMODRAFT_94945 [Selaginella moellendorffii]
Length = 614
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 4/139 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPVLGACSAL 89
VFD ++ D+ + L +Y SRN A AL Y M + +TF+ ++ C+
Sbjct: 339 VFDRVASKDIVLWTALLTAY--SRNEDAKGALLVYRNMDLEGMEKNRFTFSSIVSVCADA 396
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G++VH + G D + +V T L+D YSK + + F IE KD+VTWN ++
Sbjct: 397 EALAEGQKVHLHTVSVGYDKDVIVGTTLVDFYSKCHDVDTARSVFDGIEGKDIVTWNVMI 456
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ F+R+G +EA ++Q M
Sbjct: 457 TGFVRNGHGREAVRLYQKM 475
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD I+ + S N+ L +Y ++ + LF M + +F VLGAC +
Sbjct: 213 VFDGIAEKTVVSWNAMLTAYAQNGRYGEAVDLFWKMD---VAPDTVSFVNVLGACMDI-- 267
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ VH + G +V T+L++MY ++ L E+ + F++ +D V WN+++ +
Sbjct: 268 -EEGRLVHEHIKASGFPVGVLVSTSLVNMYGRFLRLEEAKQCFEQARERDRVCWNSMVGA 326
Query: 152 FLRHGLAKEAFGVFQ 166
+ ++G +EA VF
Sbjct: 327 YAQNGCMEEAKAVFD 341
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + + S N+ L +Y ++ + L+ M + A TF VL
Sbjct: 114 VFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGIKPDATTFVSVLDGWKG--E 171
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+++H +++ G S + AL+ MY G + ++ F I K VV+WNA+L++
Sbjct: 172 GEHGRRIHDQVVESGFGSNTTLANALVSMYGSGGRVDDARYVFDGIAEKTVVSWNAMLTA 231
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++G EA +F M
Sbjct: 232 YAQNGRYGEAVDLFWKM 248
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/88 (20%), Positives = 41/88 (46%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+ +L C++ KQ + + G + + L+ Y K G + ++ E F I
Sbjct: 14 SHASILRDCASTRDLTAAKQAQWEIARDGFGGDRYLGNLLVQAYGKCGSVRDAREVFDRI 73
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ +++ +W +L ++ +G +EA G+
Sbjct: 74 QRRNIFSWTIMLGAYADNGHGREALGLM 101
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ AL MY K G L E+ F + ++ V+WNA+L+++ ++G +EA +++ M E +
Sbjct: 95 REALGLMYGKCGHLEEAKAVFATLVERNRVSWNAMLAAYAQNGHCEEAVRLYRLMCFEGI 154
Query: 174 E 174
+
Sbjct: 155 K 155
>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
Length = 710
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 77/145 (53%), Gaps = 2/145 (1%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLF-SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+ +Y +VFD +H LN+ + +Y + ++F LF M + + YTF L
Sbjct: 287 KVLYAQRVFDN-THAQNIVLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISL 345
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+ + L + G +H L++K G + +V AL++MY+K G + ++ +AF + F+D+V
Sbjct: 346 NSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIV 405
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
TWN ++ F HGL +E F M
Sbjct: 406 TWNTMICGFSHHGLGREGLEAFDRM 430
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V D++ + DLS +S L Y F + M L L T+ L CS L
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLR 251
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+Q+H+ M++ G +SE A+++MY K G + + F +++V ++
Sbjct: 252 DLNLARQIHSRMVRLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMD 311
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ + +EA +F M + V
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEV 334
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ T V +CS+ E GKQ H +K G S V+ L+ MYS GE++ +
Sbjct: 137 FVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + D+ +++ LS +L G KE V + M +E
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGAEVLRRMAKE 231
>gi|255547019|ref|XP_002514567.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546171|gb|EEF47673.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 515
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 62/111 (55%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M + + YTF VL AC L A GKQVHA +I+ V +AL+DMY K
Sbjct: 261 FRQMRLDGIGMDQYTFGSVLTACGGLTALREGKQVHAFIIRSDCTDNVFVGSALVDMYCK 320
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L + FK +++K+VV+W A+L + ++G ++EA VF M R +E
Sbjct: 321 CKILRYAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIE 371
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF + + ++ S + L Y ++ +FC M + +T V+ +C+
Sbjct: 326 YAEAVFKRMKYKNVVSWTAILVGYGQNGFSEEAVKVFCDMQRNGIEPDDFTLGSVISSCA 385
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + E G Q H + G S V AL+ +Y K G + +S F E+ F+D V+W A
Sbjct: 386 NLASLEEGAQFHCRALVSGLISSITVSNALVTLYGKCGSIEDSDRLFNEMNFRDEVSWTA 445
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L+S + + G A+E +F+ M
Sbjct: 446 LISGYAQFGKARETIELFERM 466
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 76/152 (50%), Gaps = 6/152 (3%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFT 80
LPK ++F + + D S N+ L Y + A A M NL TF+
Sbjct: 90 LPK----MKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGVFNLNRITFS 145
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L S+ + G+Q+H ++K G V + L+DMY+K GL+ E+ + F E+ +
Sbjct: 146 TMLILASSRELVDLGRQIHGHIMKFGFGGYVFVGSPLVDMYAKTGLVYEAKKVFDEMPDR 205
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+VV N +++ L+ G+ +++ +F M +ER
Sbjct: 206 NVVMHNTMITGLLKFGMMEDSKRLFHGM-KER 236
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Query: 54 SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV 113
+RN L C++ T N + + ++ A L + + M + + S +
Sbjct: 21 TRNQSQAKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQRNSFSWNTI 80
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+A YSK G L + E F + +D V+WN +LS + +G +A + +M R+ V
Sbjct: 81 LSA----YSKSGHLPKMKEIFSLMPNRDGVSWNTILSGYASYGSVSDAVKAYNSMMRDGV 136
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 37/75 (49%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L C + K++H +IK + EP + LM+ Y K G + + F + ++
Sbjct: 14 LLKFCCETRNQSQAKKLHCHIIKTLANPEPFLYNNLMNAYGKLGNIAYARHLFDGMPQRN 73
Query: 142 VVTWNALLSSFLRHG 156
+WN +LS++ + G
Sbjct: 74 SFSWNTILSAYSKSG 88
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ Q+FDE L+S N+ + YT++ +LF M L+ T T +L AC+
Sbjct: 368 FARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACA 426
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A GK VH L+ +S V TAL+DMY+K G + E+ + F + K+VVTWNA
Sbjct: 427 QLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNA 486
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ + HG KEA +F M + +
Sbjct: 487 MITGYGLHGHGKEALKLFYEMLQSGI 512
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+I DL S N+ + YT + + LF + ++ + + T ++
Sbjct: 271 LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSSTLVGLIPVYLPFNH 330
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ + + L +K G +P V TAL +Y + + + + F E K + +WNA++S
Sbjct: 331 LQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESPEKSLASWNAMISG 390
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++GL A +FQ M
Sbjct: 391 YTQNGLTDRAISLFQEM 407
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D N+ + ++R+ F + +F M L+ + T VL A + L
Sbjct: 169 KVFDVMPERDTVLWNTMISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQ 228
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G + L K G S+ V T L+ +YSK G + F +I+ D++++NA++S
Sbjct: 229 EYRLGMGIQCLASKKGLHSDVYVLTGLISLYSKCGKSCKGRILFDQIDQPDLISYNAMIS 288
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + + A +F+ +
Sbjct: 289 GYTFNHETESAVTLFREL 306
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH---STCLNLTAYTFTPVLG 84
+ Q+F+++S DL N + + S N ++F Y H T L +T+ +
Sbjct: 64 HVRQLFNKVSKPDLFLFNVLIRGF--SDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAIS 121
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A S L G +HA I G S V +A++D+Y K+ + + F + +D V
Sbjct: 122 AASRLEDERVGVLLHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVL 181
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN ++S F R+ +++ VF M
Sbjct: 182 WNTMISGFSRNSYFEDSIRVFVDM 205
>gi|224118338|ref|XP_002317794.1| predicted protein [Populus trichocarpa]
gi|222858467|gb|EEE96014.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 69/131 (52%)
Query: 38 HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQ 97
H ++ + NS L +R T LF M + L YT +L ACS L ERGKQ
Sbjct: 532 HPNIYTWNSILAGLVENRQLDLTMQLFSEMQISKLRPDIYTVGIILPACSRLATLERGKQ 591
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
HA IK G D++ + AL+DMY+K G L + A+ I ++V+ NA+L++ HG
Sbjct: 592 AHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDRISNPNLVSHNAMLTACAMHGH 651
Query: 158 AKEAFGVFQAM 168
+E +FQ M
Sbjct: 652 GEEGISLFQTM 662
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L + VL +C P+ GKQVHA IK G D++ + T L+ MY++ GLL ++
Sbjct: 60 LNTSKYASVLDSCKC---PKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKDADFL 116
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
F+ + +++ +W A+LS +L HGL +EAF +FQ + + VE
Sbjct: 117 FETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVEL 158
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 1/115 (0%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
L S NS + Y R+ F +++F M + ++T VL AC+ + +GK++H
Sbjct: 398 LISWNSIISGYVRNFMFDEAFSMFQNMLMEEGIEPDSFTLGSVLTACADTISLRQGKEIH 457
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
A I G S+ V AL++MYSK L + AF E+ KDV TWNAL+S + R
Sbjct: 458 AQAIVKGLQSDTFVGGALVEMYSKCQDLTAAQVAFDEVMEKDVPTWNALISGYTR 512
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + +L S + L Y F + LF + + L + F V ACS L +
Sbjct: 116 LFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVFPLVFKACSGLGS 175
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+Q+H L+IK V AL+DMY K G L ++ + ++ +D VTWN+++++
Sbjct: 176 VELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGSLDDAKKVLVKMPERDSVTWNSVITA 235
Query: 152 FLRHGLAKEAFGVFQAM 168
+G+ EA + M
Sbjct: 236 CAANGMVYEALEFLEKM 252
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A T VL AC+ L + GKQ+H + + S PVV AL+D+Y + G +G + + F
Sbjct: 296 NAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGGAAKIF 355
Query: 135 KEIEFKDVVTWNALLSSFLRHG---LAKEAFGVFQAMTRER 172
+ K+V++ N ++ + G AKE F + ER
Sbjct: 356 LKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIER 396
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 5/132 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +D IS+ +L S N+ L + + +LF M + TF VL +C
Sbjct: 623 YAQLAYDRISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCV 682
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
+ + E G + LM G + +P +K T+++D+ S+ G L E+ E K++ + D V
Sbjct: 683 HVGSVETGCEFFDLM--GYYNVKPTLKHYTSMVDLLSRSGQLHEAYELIKKMPVECDSVL 740
Query: 145 WNALLSSFLRHG 156
W ALL + HG
Sbjct: 741 WGALLGGCVTHG 752
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD + L S N+ + Y ++ FP +F M + L + PV GACS LP
Sbjct: 303 LFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 361
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G++ HA +K + + + +L+DMY+K G + +S + F ++ K +WNA++
Sbjct: 362 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 421
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ HGLAKEA +F+ M R
Sbjct: 422 GYGIHGLAKEAIKLFEEMQR 441
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF I ++S N+ + + +S + + M + L ++T +L ACS
Sbjct: 198 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 257
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GK+VH +I+ + + V +++ +Y G L F +E K +V+WN
Sbjct: 258 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 317
Query: 148 LLSSFLRHGLAKEAFGVFQAMT 169
+++ +L++G A GVF+ M
Sbjct: 318 VITGYLQNGFPDRALGVFRQMV 339
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL C+ GK VH +K D E V+ ALMDMYSK G + + FK
Sbjct: 44 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 103
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+VV+WN ++ F G F V + M
Sbjct: 104 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 134
>gi|357436395|ref|XP_003588473.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477521|gb|AES58724.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 827
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 66/129 (51%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS L ++ + LF M + L YT +L ACS L RGKQVHA I+
Sbjct: 511 NSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIR 570
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G DS+ + L+DMY+K G + + + +I ++V NA+L+++ HG +E +
Sbjct: 571 AGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVI 630
Query: 165 FQAMTRERV 173
F+ M RV
Sbjct: 631 FRRMLDSRV 639
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 56/101 (55%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L + F VL C L E G+QVH +++K G + V AL+DMY K G L E+ +
Sbjct: 132 LDFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKV 191
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + KD V+WN+++++ + +G+ EA + + M +E
Sbjct: 192 LEGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELE 232
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+Q+ E D S N + + + F LF + + ++T +L + +
Sbjct: 360 YQMEQEGVERDRISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADM 419
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+GK++H++ I G S V AL++MY K + + AF EI +D TWNAL+
Sbjct: 420 TCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALI 479
Query: 150 SSFLR 154
S + R
Sbjct: 480 SGYAR 484
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + A T VL ACS + GK++H +++ S V AL+ MY
Sbjct: 257 LFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYR 316
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ G + + + F + K ++N ++ +L +G +A +F M +E VE
Sbjct: 317 RCGDMKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVE 368
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
LT+ T++ +L + ++L GKQ+H+ IK G + V+T L+ MYS ++
Sbjct: 32 LTSTTYSTILQSSNSLTL---GKQLHSHSIKTGFYNHNFVQTKLLQMYSINSSFEDAWHM 88
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
F ++ K++ +W A+L L GL + F +F+
Sbjct: 89 FDKMTLKNLHSWTAVLRLHLNMGLFYKGFMLFE 121
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +QV+++IS+ +L N+ L +Y + +F M + + TF VL +C
Sbjct: 595 HCYQVYNKISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRMLDSRVRPDHVTFLSVLSSCV 654
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
+ + G + LM + P +K T ++D+ S+ G L E+ + K + + D VT
Sbjct: 655 HAGSIKIGYECFYLMET--YNITPTLKHYTCMVDLLSRAGKLDEAYQLIKNMPMEADSVT 712
Query: 145 WNALLSSFLRH 155
W+ALL H
Sbjct: 713 WSALLGGCFIH 723
>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
Length = 739
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D S + L +Y++ T LF M + F VL C+ + A
Sbjct: 339 VFDTMPQKDAVSWAAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAA 398
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q+H +I+ G V AL+ MY K G + ++ AF+E+E +DVV+WN +++
Sbjct: 399 LECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAG 458
Query: 152 FLRHGLAKEAFGVFQAM 168
+ RHG KEA +F M
Sbjct: 459 YARHGFGKEALEIFDMM 475
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
F+E+ D+ S N+ + Y R +F M +T T VL ACS
Sbjct: 439 NAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLAACSHSG 498
Query: 91 APERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E+G +++ G ++P T ++D+ + G L E+ + K++ F+ D W AL
Sbjct: 499 LVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKDMPFEPDSTMWGAL 558
Query: 149 LSSFLRH 155
L + H
Sbjct: 559 LGASRIH 565
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 107 TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
T+ + + ALM Y ++G + E+ E F + +DVV+WN ++S + R G EA +F
Sbjct: 189 TEWDVISWNALMSGYVQWGKMSEARELFDRMPGRDVVSWNIMVSGYARRGDMVEARRLFD 248
Query: 167 A 167
A
Sbjct: 249 A 249
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 36/159 (22%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R ++F + S+ N+ L Y+ + P +LF
Sbjct: 53 RVADAERLFAAMPRRSTSTYNAMLAGYSANGRLPLAASLF-------------------- 92
Query: 85 ACSALPAPER---GKQVHALMI-------KGGTDSEPVVKTA----LMDMYSKYGLLGES 130
A+P P+ +HAL + +G D PV + ++ ++ +GL+ +
Sbjct: 93 --RAIPRPDNYSYNTLLHALAVSSSLADARGLFDEMPVRDSVTYNVMISSHANHGLVSLA 150
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F KD V+WN +L++++R+G +EA G+F + T
Sbjct: 151 RHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 189
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 120 MYSKYGLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
M S Y G+ VEA F +DV TW A++S + ++G+ +EA VF AM
Sbjct: 230 MVSGYARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM 281
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 94 RGKQVHALMIKGGTDSEPVVK----TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG V A + D+ PV TA++ Y++ G+L E+ F + ++ V+WNA++
Sbjct: 237 RGDMVEARRL---FDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMV 293
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+++++ + EA +F M
Sbjct: 294 AAYIQRRMMDEAKELFNMM 312
>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
Length = 1702
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD + L S N+ + Y ++ FP +F M + L + PV GACS LP
Sbjct: 908 LFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 966
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G++ HA +K + + + +L+DMY+K G + +S + F ++ K +WNA++
Sbjct: 967 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 1026
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ HGLAKEA +F+ M R
Sbjct: 1027 GYGIHGLAKEAIKLFEEMQR 1046
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSALP 90
VFD + +L N+ + SY+R+ + F M ST L +T+ V+ AC+ +
Sbjct: 497 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 556
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G VH L++K G + V AL+ Y +G + ++++ F + +++V+WN+++
Sbjct: 557 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 616
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F +G ++E+F + M E
Sbjct: 617 VFSDNGFSEESFLLLGEMMEE 637
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF I ++S N+ + + +S + + M + L ++T +L ACS
Sbjct: 803 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 862
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GK+VH +I+ + + V +++ +Y G L F +E K +V+WN
Sbjct: 863 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 922
Query: 148 LLSSFLRHGLAKEAFGVFQAMT 169
+++ +L++G A GVF+ M
Sbjct: 923 VITGYLQNGFPDRALGVFRQMV 944
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 4/142 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTAYTFTPVLGAC 86
Q+FD + +L S NS + ++ + ++ L M T VL C
Sbjct: 598 QLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVC 657
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ GK VH +K D E V+ ALMDMYSK G + + FK K+VV+WN
Sbjct: 658 AREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWN 717
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
++ F G F V + M
Sbjct: 718 TMVGGFSAEGDTHGTFDVLRQM 739
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 93 ERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+++H L + G T ++ V+ T ++ MY+ G +S F + K++ WNA++S
Sbjct: 456 EMGRKIHQL-VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 514
Query: 151 SFLRHGLAKEAFGVFQAM 168
S+ R+ L E F M
Sbjct: 515 SYSRNELYDEVLETFIEM 532
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEI D+ S N+ + Y +S F A F M ++ T VL AC L
Sbjct: 214 RLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLR 273
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E GK + + + G + AL+DMYSK G +G + + F +E KDV+ WN ++
Sbjct: 274 SLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIG 333
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ L +EA +F+ M RE V
Sbjct: 334 GYCHLSLYEEALVLFEVMLRENV 356
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 72/145 (49%), Gaps = 4/145 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D+ N+ + Y + LF M + TF VL AC++L
Sbjct: 315 KLFDGMEDKDVILWNTMIGGYCHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLG 374
Query: 91 APERGKQVHALMIKG----GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
A + GK VHA + K G + + T+++ MY+K G + + + F+ + + + +WN
Sbjct: 375 ALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWN 434
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S +G A+ A G+F+ M E
Sbjct: 435 AMISGLAMNGHAERALGLFEEMINE 459
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 31/142 (21%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + L ++TF + +C+ A KQ+HA +K P V T+L+ MYS
Sbjct: 114 LFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYS 173
Query: 123 KYGLL-------------------------------GESVEAFKEIEFKDVVTWNALLSS 151
+ G L ++ F EI KDVV+WNA+++
Sbjct: 174 QVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPAKDVVSWNAMIAG 233
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+++ G +EA F M V
Sbjct: 234 YVQSGRFEEALACFTRMQEADV 255
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF E ++ S N+ + Y+ + F LF M + T VL AC+
Sbjct: 194 SRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAH 253
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A +G+ VHA + K G + V TAL+DMYSK G + +++E F KD+ TWN++
Sbjct: 254 VGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSI 313
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
+S HG + A +F M E
Sbjct: 314 ISGLSTHGSGQHALQIFSEMLVE 336
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
S A A+P Y H +F I + + N+ + +Y S A +F M +
Sbjct: 53 SHAQAIP----YAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDK 108
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTFT L +C + E G+Q+H ++K G + ++ L+ +Y+ G + ++
Sbjct: 109 YTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDR 168
Query: 137 IEFKDVVTWNALLSSFLRHGL----AKEAFG 163
+ +DVV+WNALLS++ GL ++ FG
Sbjct: 169 MLERDVVSWNALLSAYAERGLMELASRRVFG 199
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI AL +VF+ D+S+ NS + + + +F M
Sbjct: 289 CGSIEKAL--------EVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKP 340
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TF VL ACS + G+++ LM+ +P ++ ++D+ + GLL E+ E
Sbjct: 341 NEVTFVCVLSACSRAGLLDEGREMFNLMVH-VHGIQPTIEHYGCMVDLLGRVGLLEEAEE 399
Query: 133 AFKEIEFKDV-VTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ K+ V W +LL + HG + A V Q +
Sbjct: 400 LVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKL 436
>gi|75274055|sp|Q9LT48.1|PP244_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g20730
gi|9294399|dbj|BAB02480.1| unnamed protein product [Arabidopsis thaliana]
gi|51971823|dbj|BAD44576.1| unknown protein [Arabidopsis thaliana]
Length = 565
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD IS D+ S + + ++R P LF MH + +T+ VL +C
Sbjct: 66 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCK 125
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G Q+H + KG +V++AL+ +Y++ G + E+ F ++ +D+V+WNA
Sbjct: 126 DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNA 185
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++ + + A +F +FQ M E
Sbjct: 186 MIDGYTANACADTSFSLFQLMLTE 209
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ + + G+Q+H +K + + +L+DMY+K G + ++V AF+E++
Sbjct: 321 SSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK 380
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDV +W +L++ + RHG ++A ++ M ER++
Sbjct: 381 EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 416
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L+ + L CS ++ +H I G S +K L+D+Y K G + + +
Sbjct: 11 LSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKL 70
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F I +DVV+W A++S F R G +A +F+ M RE V+
Sbjct: 71 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 111
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+++ ++L Y + ++ F+E+ D+ S S + Y R NF L+ M
Sbjct: 353 VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 412
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMI-KGGTDSEPVVKTALMDMYSKYGLLG 128
+ TF +L ACS E G +++ MI K G ++ + ++DM ++ G L
Sbjct: 413 ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLE 472
Query: 129 ESVEAFKEIEFKDVV------TWNALLSSFLRHG 156
EA+ I K+ + TW A L + RHG
Sbjct: 473 ---EAYALIRSKEGIVSLSSSTWGAFLDACRRHG 503
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + DL S N+ + YT + +++LF M + +TF +L A +
Sbjct: 172 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCL 231
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E ++H L IK G + +L++ Y K G L + + + + +D+++ AL++ F
Sbjct: 232 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 291
Query: 153 -LRHGLAKEAFGVFQAMTRERVEF 175
++ +AF +F+ M R + +
Sbjct: 292 SQQNNCTSDAFDIFKDMIRMKTKM 315
>gi|27573363|gb|AAO20081.1| hypothetical protein [Oryza sativa Japonica Group]
gi|108712148|gb|ABF99943.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 515
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 28 YTHQVFDEI----SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
Y H +FD + + D N + Y R AL+ M + +TFT L
Sbjct: 125 YAHHLFDHLLPARAREDAFPWNCLIAGYARLGRHEDALALYLQMEEETVPRDRFTFTSAL 184
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+ + + E G +H +++ G S+ V AL+D+Y+ +G + +++ F + +D V
Sbjct: 185 QACAGVGSVELGHAIHRDVVRAGLASDVPVCDALVDLYATFGDVRRALQVFDAMPDRDGV 244
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+WN +L+ LRHGL+++A +++ M RE E
Sbjct: 245 SWNIMLAGCLRHGLSQQALELWRRMLREEHE 275
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G ++HA I+ G ++E V AL+ MYS ++ F+ + +D+ +WNA++S+ L+
Sbjct: 298 GLEIHAWAIRHGLETELSVANALIRMYSDKNEQSHALLVFESMTMRDLQSWNAIISAHLQ 357
>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1736
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 71/129 (55%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D S NS + Y + L +M L ++TF +L AC+++ ERG +VH
Sbjct: 656 DEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVH 715
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A I+ +S+ VV +AL+DMYSK G + + F+ + ++V +WN+++S + RHG +
Sbjct: 716 ACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGE 775
Query: 160 EAFGVFQAM 168
+A +F M
Sbjct: 776 KALKLFTRM 784
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 75/145 (51%), Gaps = 6/145 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ ++ S+N + + + A +F M + + + ++ +L A S
Sbjct: 338 NIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDSYVVLLSAFSEFS 396
Query: 91 APE----RGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
E +G++VHA +I+ G D++ + L++MY+K G + ++ F+ + KD V+W
Sbjct: 397 VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSW 456
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N+L+S ++ +++A F M R
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRR 481
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC--S 87
++FDE+S+ +L + + YT++ A F M Y F L AC S
Sbjct: 126 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 185
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY-SKYGLLGESVEAFKEIEFKDVVTWN 146
+ G Q+H L+ K S+ VV L+ MY S ++ F I ++ ++WN
Sbjct: 186 GPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWN 245
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+++S + R G A A+ +F +M +E + F
Sbjct: 246 SIISVYSRRGDAVSAYDLFSSMQKEGLGF 274
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 8/166 (4%)
Query: 14 TCISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSR-NFPATWALFCY 66
T +S+++AL Y T +VF + D S NS + + + S + F
Sbjct: 521 TDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQ 580
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M L+ TF +L A S+L E Q+HAL++K + + AL+ Y K G
Sbjct: 581 MMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGE 640
Query: 127 LGESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ E + F + E +D V+WN+++S ++ + L +A + M ++
Sbjct: 641 MNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 686
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 67/146 (45%), Gaps = 9/146 (6%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK+ +IADA VF+ + D S NS + ++ F
Sbjct: 428 LVNMYAKSG-AIADACS--------VFELMVEKDSVSWNSLISGLDQNECSEDAAESFHR 478
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M T + +T L +C++L G+Q+H +K G D++ V AL+ +Y++ G
Sbjct: 479 MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 538
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSF 152
E ++ F + D V+WN+++ +
Sbjct: 539 FTECLKVFSLMPEYDQVSWNSVIGAL 564
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT----AYTFTPVLG-AC 86
VFD I + S NS + Y+R + + + LF M L + YTF ++ AC
Sbjct: 232 VFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTAC 291
Query: 87 SALPAPERG----KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
S++ + G +Q+ A + K G + V +AL+ ++++GL ++ F+++ ++V
Sbjct: 292 SSV---DFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAKNIFEQMGVRNV 348
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+ N L+ ++ + A VF M
Sbjct: 349 VSMNGLMVGLVKQKQGEAAAKVFHEM 374
>gi|356551964|ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 551
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N + Y ++ + + LF M L YT +L ACS L +RGKQVHA I+
Sbjct: 374 NGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIR 433
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G DS+ + AL+DMY+K G + + I ++V+ NA+L+++ HG +E +
Sbjct: 434 AGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIAL 493
Query: 165 FQAMTRERVE 174
F+ M +V
Sbjct: 494 FRRMLASKVR 503
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 31 QVFDEISH----GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
++FD + D S NS + Y F ++LF + + ++T VL C
Sbjct: 220 ELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGC 279
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + RGK+ H+L I G S +V AL++MYSK + + AF + +D+ TWN
Sbjct: 280 ADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWN 339
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AL+S + R A++ + Q M R+ E
Sbjct: 340 ALISGYARCNQAEKIRELHQKMRRDGFE 367
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK-------------TALM 118
+ L + F VL C L A E G+Q+H + +K D + + A++
Sbjct: 147 VRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMI 206
Query: 119 DMYSKYGLLGESVEAFKEIEF----KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y + G L ++ E F +E KD ++WN+++S ++ L EA+ +F+ + +E +E
Sbjct: 207 AGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIE 266
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++ T+ +L +C + P GKQ+HA IK G ++ V T L+ MY++ + F
Sbjct: 50 SSTTYASILDSCGS---PILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVF 106
Query: 135 KEIEFKDVVTWNALLSSFLRHG 156
+ +++ +W ALL ++ G
Sbjct: 107 DTMPLRNLHSWTALLRVYIEMG 128
>gi|294462449|gb|ADE76772.1| unknown [Picea sitchensis]
Length = 232
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 69/119 (57%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
Y ++ F LF M T + A TF VL AC+ L A E GK +H +IK G +S
Sbjct: 4 GYAQNGYFDEALKLFQRMQLTKVKPNAETFPSVLPACANLAALEPGKVLHLYIIKSGFES 63
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V + L+DMY+K +G++ + F + ++VV+WNA+++++ HG K+A +F+ M
Sbjct: 64 DVFVGSTLIDMYAKCSSIGDASKVFDGMSTRNVVSWNAMIAAYAIHGCGKQALDLFEQM 122
>gi|255566993|ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536267|gb|EEF37919.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 576
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 10/167 (5%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++ ++L Y + Q +F+ ++ D+ S N+ L + RS +AL M+S
Sbjct: 113 ITVPNSLMNMYCKSGQFTHALCIFETLNDPDIVSWNTVLSGFQRSEE-ALNFAL--KMNS 169
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ A T+T VL CS + G Q+H+ ++K G D E V AL+ MYS++G L E
Sbjct: 170 NGVVFDAVTYTTVLAFCSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLE 229
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGL-AKEAFGVFQAMTRERVEF 175
+ F+E++ D+V+WNA++S + + G+ EA +F M R ++
Sbjct: 230 AGRVFEEMQTTDLVSWNAIISGYTQAGIYGLEAISIFIEMVRRGIKL 276
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 56/88 (63%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF ++ A + E GK VH IK G EP V+ + + MY+K+G +S++ F+E+
Sbjct: 376 TFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQNSFITMYAKFGSAEDSMKVFEEL 435
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+++++TWNAL+S + ++GL++EA F
Sbjct: 436 NYREIITWNALISGYAQNGLSQEAIITF 463
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+E+ DL S N+ + YT++ + ++F M + L +FT + AC
Sbjct: 232 RVFEEMQTTDLVSWNAIISGYTQAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHE 291
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+QVH L IK G V L+ YSK ++ ++ F+ + ++VV+W ++
Sbjct: 292 RNLEVGRQVHGLSIKRGYGKHVSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMI 351
Query: 150 S 150
S
Sbjct: 352 S 352
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSR-NFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+E+++ ++ + N+ + Y ++ + A F + + N YTF VL A A
Sbjct: 430 KVFEELNYREIITWNALISGYAQNGLSQEAIITFFSALAESKPN--QYTFGSVLSAIGAA 487
Query: 90 P--APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+ + G+ HA ++K G +S+PVV +AL+DMY+K G
Sbjct: 488 EDISLKHGQMCHAQIMKLGFNSDPVVSSALLDMYAKRG 525
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G Q+H I G S V +LM+MY K G ++ F+ + D+V+WN +LS F R
Sbjct: 97 GSQIHGFAITSGLYSFITVPNSLMNMYCKSGQFTHALCIFETLNDPDIVSWNTVLSGFQR 156
Query: 155 HGLAKEAFGVFQAMTRERVEF 175
++EA M V F
Sbjct: 157 ---SEEALNFALKMNSNGVVF 174
>gi|15232344|ref|NP_188709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|38564272|gb|AAR23715.1| At3g20730 [Arabidopsis thaliana]
gi|332642896|gb|AEE76417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 564
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD IS D+ S + + ++R P LF MH + +T+ VL +C
Sbjct: 65 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCK 124
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G Q+H + KG +V++AL+ +Y++ G + E+ F ++ +D+V+WNA
Sbjct: 125 DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNA 184
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++ + + A +F +FQ M E
Sbjct: 185 MIDGYTANACADTSFSLFQLMLTE 208
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ + + G+Q+H +K + + +L+DMY+K G + ++V AF+E++
Sbjct: 320 SSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK 379
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDV +W +L++ + RHG ++A ++ M ER++
Sbjct: 380 EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L+ + L CS ++ +H I G S +K L+D+Y K G + + +
Sbjct: 10 LSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKL 69
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F I +DVV+W A++S F R G +A +F+ M RE V+
Sbjct: 70 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 110
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+++ ++L Y + ++ F+E+ D+ S S + Y R NF L+ M
Sbjct: 352 VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 411
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMI-KGGTDSEPVVKTALMDMYSKYGLLG 128
+ TF +L ACS E G +++ MI K G ++ + ++DM ++ G L
Sbjct: 412 ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLE 471
Query: 129 ESVEAFKEIEFKDVV------TWNALLSSFLRHG 156
EA+ I K+ + TW A L + RHG
Sbjct: 472 ---EAYALIRSKEGIVSLSSSTWGAFLDACRRHG 502
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + DL S N+ + YT + +++LF M + +TF +L A +
Sbjct: 171 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCL 230
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E ++H L IK G + +L++ Y K G L + + + + +D+++ AL++ F
Sbjct: 231 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 290
Query: 153 -LRHGLAKEAFGVFQAMTRERVEF 175
++ +AF +F+ M R + +
Sbjct: 291 SQQNNCTSDAFDIFKDMIRMKTKM 314
>gi|77548396|gb|ABA91193.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125533163|gb|EAY79711.1| hypothetical protein OsI_34859 [Oryza sativa Indica Group]
gi|125575980|gb|EAZ17202.1| hypothetical protein OsJ_32710 [Oryza sativa Japonica Group]
Length = 537
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+ D+ SLNS + YT+ + +F M + T T +LGAC+
Sbjct: 302 RLFREMPQRDVVSLNSLISGYTKLGKYTKALEIFQEMKENAIEPTELTLVLILGACAKDG 361
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G +H + G S+ +V AL+DMY+K G L + + F + +D+ WNA++
Sbjct: 362 KLELGTDIHINLQSKGIVSDGLVGNALIDMYAKCGRLDLAKKVFDRMSMRDITCWNAMII 421
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F HG + EA +F +M E
Sbjct: 422 GFSVHGCSYEALELFDSMKIE 442
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
LF++ S + P F + +C A+ + G S + +G ++H ++K G
Sbjct: 160 LFNHASSCSLPTPLPTFPALLKSCAR--AFNRSSRAGVASVFVS--KGMELHCRVLKLGC 215
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG---V 164
+ V+ AL+ MY K+G LG++ +AF E+ K+ V+WNAL+ + H A + G V
Sbjct: 216 GKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGA---HRAAADWMGAERV 272
Query: 165 FQAMTRERVEF 175
QAM + +
Sbjct: 273 SQAMPERNLSW 283
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G + E+ F+E+ +DVV+ N+L+S + + G +A +FQ M +E
Sbjct: 295 GYMDEASRLFREMPQRDVVSLNSLISGYTKLGKYTKALEIFQEMKENAIE 344
>gi|255550217|ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544645|gb|EEF46161.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1439
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 64/98 (65%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF ++ A S L A E+G+Q+HA +IK S+P V T+L+DMY+K G++ ++ F+
Sbjct: 1293 YTFATLIKASSCLTALEQGRQIHANVIKLECASDPFVGTSLIDMYAKCGIIEDAYCLFRR 1352
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ +++V WNA+L S +HG +EA +F+ M ++
Sbjct: 1353 MDVRNIVVWNAMLVSLAQHGHGEEALHLFKVMQSHSIK 1390
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + DL++ N+ +F Y + LF +MH + YT AC +L
Sbjct: 1147 IFENKNKFDLAAWNAMMFGYIICGDHDKGLKLFAFMHEKGESCDEYTLATAAKACGSLVR 1206
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GKQ+HAL IK G +S+ + + ++DMY K G + + F I D V W ++S
Sbjct: 1207 LEQGKQIHALAIKFGLNSDLFLSSGILDMYIKCGNMEDGHLLFDNIPVPDDVAWTIMISG 1266
Query: 152 FLRHGLAKEAFGVFQAM 168
+ +G A V++ M
Sbjct: 1267 CVENGDEDRALSVYRQM 1283
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 70/140 (50%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSR-----NFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
Q+FD DL + N+ L +Y RS + + +F + ++ + T P+L
Sbjct: 760 QLFDRTPDRDLVTWNAVLSAYARSDESEYDHVVEGFHIFRLLRERFVSTSKLTLAPMLKL 819
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + VH +K G + + V AL+++YSK+GL+ E+ F ++ +DVV W
Sbjct: 820 CLLSGYVCASQAVHGYAVKIGLELDVFVSGALVNIYSKFGLVREARGLFDIMQERDVVLW 879
Query: 146 NALLSSFLRHGLAKEAFGVF 165
N +L +++ GL KEA F
Sbjct: 880 NVMLKAYVEMGLVKEALSFF 899
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 81/159 (50%), Gaps = 10/159 (6%)
Query: 24 KRYV-----YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH---STCLNLT 75
+RY+ Y ++F + D+ N +L Y ++ F A A+ C+++ S+ +
Sbjct: 930 RRYIEQIQAYATKLFFCDDNTDVVMWNKKLSEYLQAGAFWA--AVDCFINMLTSSHVKYD 987
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
T VL A + GK +H + +K G DS V +L++MYSK G + + F
Sbjct: 988 NVTLVVVLAAATGTGDLMLGKLIHGMTLKSGFDSVVSVANSLINMYSKMGFVSLAHTVFT 1047
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ D+++WN+++S + ++GL KE+ + + R+ ++
Sbjct: 1048 GMNELDLISWNSMISCYAQNGLQKESVNLLVGLLRDGLQ 1086
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 14 TCISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
+ +S+A++L Y H VF ++ DL S NS + Y ++ + L +
Sbjct: 1021 SVVSVANSLINMYSKMGFVSLAHTVFTGMNELDLISWNSMISCYAQNGLQKESVNLLVGL 1080
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPE-RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
L +T VL ACS+L KQ+H + K +E V TAL+D+YS+ GL
Sbjct: 1081 LRDGLQPDHFTLASVLKACSSLTEGLFLSKQIHVYVTKTSIIAENFVSTALIDVYSRSGL 1140
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ E+ F+ D+ WNA++ ++ G + +F M
Sbjct: 1141 MAEAEFIFENKNKFDLAAWNAMMFGYIICGDHDKGLKLFAFM 1182
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
GK +HA +I G S+ + L+ MYSK G + + + F +D+VTWNA+LS++ R
Sbjct: 723 GKCIHANIITSGLTSDRFLANNLITMYSKCGSVSSARQLFDRTPDRDLVTWNAVLSAYAR 782
Query: 155 HGLAK-----EAFGVFQAMTRER 172
++ E F +F+ + RER
Sbjct: 783 SDESEYDHVVEGFHIFR-LLRER 804
>gi|356564808|ref|XP_003550640.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37320-like [Glycine max]
Length = 501
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ ++ S + + + + + LF M + L +T+T +L AC
Sbjct: 163 RVFEEMPVRNVVSWTAIIAGFAQEWHVDMCLELFQQMRGSDLRPNYFTYTSLLSACMGSG 222
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+ H +I+ G S ++ AL+ MYSK G + +++ F+ + +DVVTWN ++S
Sbjct: 223 ALGHGRCAHCQIIRMGFHSYLHIENALISMYSKCGAIDDALHIFENMVSRDVVTWNTMIS 282
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HGLA+EA +F+ M ++ V
Sbjct: 283 GYAQHGLAQEAINLFEEMIKQGVN 306
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ + + + +C + G Q H L I G + V ++L+ +YS+ LG++
Sbjct: 105 VDVFFLSQAVSSCGSKRDLWGGIQYHCLAITTGFVASVYVGSSLISLYSRCAFLGDACRV 164
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F+E+ ++VV+W A+++ F + +FQ M
Sbjct: 165 FEEMPVRNVVSWTAIIAGFAQEWHVDMCLELFQQM 199
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +I DAL +F+ + D+ + N+ + Y + LF M +N
Sbjct: 256 CGAIDDAL--------HIFENMVSRDVVTWNTMISGYAQHGLAQEAINLFEEMIKQGVNP 307
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A T+ VL +C + G+ M++ G + ++D+ + GLL E+ +
Sbjct: 308 DAVTYLGVLSSCRHGGLVKEGQVYFNSMVEHGVQPGLDHYSCIVDLLGRAGLLLEARDFI 367
Query: 135 KEIE-FKDVVTWNALLSSFLRHG 156
+ + F + V W +LLSS HG
Sbjct: 368 QNMPIFPNAVVWGSLLSSSRLHG 390
>gi|297727903|ref|NP_001176315.1| Os11g0114800 [Oryza sativa Japonica Group]
gi|255679719|dbj|BAH95043.1| Os11g0114800, partial [Oryza sativa Japonica Group]
Length = 483
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 71/141 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+ D+ SLNS + YT+ + +F M + T T +LGAC+
Sbjct: 248 RLFREMPQRDVVSLNSLISGYTKLGKYTKALEIFQEMKENAIEPTELTLVLILGACAKDG 307
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G +H + G S+ +V AL+DMY+K G L + + F + +D+ WNA++
Sbjct: 308 KLELGTDIHINLQSKGIVSDGLVGNALIDMYAKCGRLDLAKKVFDRMSMRDITCWNAMII 367
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F HG + EA +F +M E
Sbjct: 368 GFSVHGCSYEALELFDSMKIE 388
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 10/131 (7%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
LF++ S + P F + +C A+ + G S + +G ++H ++K G
Sbjct: 106 LFNHASSCSLPTPLPTFPALLKSCAR--AFNRSSRAGVASVFVS--KGMELHCRVLKLGC 161
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG---V 164
+ V+ AL+ MY K+G LG++ +AF E+ K+ V+WNAL+ + H A + G V
Sbjct: 162 GKDRYVRNALVSMYGKFGRLGDARKAFDEMPDKNAVSWNALVGA---HRAAADWMGAERV 218
Query: 165 FQAMTRERVEF 175
QAM + +
Sbjct: 219 SQAMPERNLSW 229
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G + E+ F+E+ +DVV+ N+L+S + + G +A +FQ M +E
Sbjct: 241 GYMDEASRLFREMPQRDVVSLNSLISGYTKLGKYTKALEIFQEMKENAIE 290
>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Vitis vinifera]
Length = 786
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 3 SFIRMTNFPAKTCIS--IADALPKR--YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP 58
S I T F A ++ + D KR + Y VF++++ D+ S S + + ++
Sbjct: 365 SLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYE 424
Query: 59 ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
LFC M ++ VL AC+ L E GKQVHA +K G S V +L+
Sbjct: 425 EALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLV 484
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
MY+K G + ++ + F +E +DV+TW AL+ + ++G ++ G+ +
Sbjct: 485 SMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVE 532
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 54 SRNFPATWALFCY--MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP 111
S+N A+ C+ M + +TF +L AC ++ A G QVH +++ G +
Sbjct: 216 SQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANV 275
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V +AL+DMYSK G L + + +E D V+WN+++ +R GL +EA +F+ M
Sbjct: 276 FVGSALVDMYSKCGDLSNARRMLETMEVDDPVSWNSMIVGCVRQGLGEEALSLFRIM 332
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +++A +R + T +V D +S NS + R +LF MH + +
Sbjct: 288 CGDLSNA--RRMLETMEVDDPVS------WNSMIVGCVRQGLGEEALSLFRIMHLRHMKI 339
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T+ VL S + VH+L++K G ++ +V AL+DMY+K G + + F
Sbjct: 340 DEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVF 399
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ KDV++W +L++ + +G +EA +F M
Sbjct: 400 EKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM 433
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK- 135
+T+ VL CS E+GKQ+HA IK DS V T L+DMY+K + E+ F+
Sbjct: 139 FTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEYLFEL 198
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ V W A+++ + ++G +A F+ M E +E
Sbjct: 199 APDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIE 237
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 32/64 (50%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + ++ Y+ G L E+ + F E + +TW++L+S + R+G EA +F
Sbjct: 69 DRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELFWE 128
Query: 168 MTRE 171
M E
Sbjct: 129 MQYE 132
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ IS D + S + + N ++ M + + YTF ++ A S + A
Sbjct: 1164 VFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA 1223
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G+Q+HA +IK S+P V T+L+DMY+K G + ++ FK++ +++ WNA+L
Sbjct: 1224 LEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVG 1283
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+HG A+EA +F++M +E
Sbjct: 1284 LAQHGNAEEAVNLFKSMKSHGIE 1306
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 63/134 (47%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL+ N+ +F Y + LF +H + T AC L ++GKQ+H
Sbjct: 1071 DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIH 1130
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A IK G DS+ V + ++DMY K G + + F I D V W +++S + +G
Sbjct: 1131 AHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNED 1190
Query: 160 EAFGVFQAMTRERV 173
+A ++ M + RV
Sbjct: 1191 QALRIYHRMRQSRV 1204
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 62 ALFCYMHSTCLNLT--AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
A+ C+++ LN+ A T VL A + E GKQVH + +K G DS+ V +L++
Sbjct: 888 AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVN 947
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
MYSK G + E F +++ D+++WN+++SS + L +E+ +F + E
Sbjct: 948 MYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE 999
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 7/157 (4%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A++L Y + +VF+++ H DL S NS + S +S + LF +
Sbjct: 939 VSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLH 998
Query: 70 TCLNLTAYTFTPVLGACSAL-PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
L +T VL ACS+L +Q+H +K G ++ V T L+D+YSK G +
Sbjct: 999 EGLKPDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKME 1058
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
E+ F+ + D+ WNA++ ++ K+A +F
Sbjct: 1059 EAEFLFQNKDDLDLACWNAMMFGYIIGNDGKKALELF 1095
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 5/145 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS-----RNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
QVFD DL + N+ L +Y S N LF + ++ + T T PVL
Sbjct: 677 QVFDTTPERDLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKL 736
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + VH IK G + + V AL+++YSK G + ++ F + +DVV W
Sbjct: 737 CLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLW 796
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N +L +++ GL KEAF +F R
Sbjct: 797 NMMLKGYVQLGLEKEAFQLFSEFHR 821
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL- 153
GK HA ++ G+ + + L+ MYSK G L + + F +D+VTWNA+L ++
Sbjct: 640 GKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAA 699
Query: 154 ----RHGLAKEAFGVFQAM 168
G A+E +F+ +
Sbjct: 700 SVDSNDGNAQEGLHLFRLL 718
>gi|225457491|ref|XP_002267777.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22070
[Vitis vinifera]
gi|296087996|emb|CBI35279.3| unnamed protein product [Vitis vinifera]
Length = 598
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F+E+ D+ + N L M + + + +T L AC+ L
Sbjct: 305 KAFEEMVERDVCTWNQMAAGCLNCGKPGRALELIEEMRRSGVRMNKFTLATALTACANLA 364
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E GK+ H L IK G D + V AL+DMY+K G +G++++ F +E + VV+W ++
Sbjct: 365 SLEEGKKAHGLRIKLGNDVDVCVDNALLDMYAKCGSMGDALKVFGTVEARSVVSWTTMIM 424
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F ++G A++A +F+ M E
Sbjct: 425 GFAQNGQARKALEIFEQMRAE 445
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 5/147 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR--SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VF+ D+ S N+ + + P W C + + F+ VL +A
Sbjct: 205 EVFEACRGKDVVSWNAVMAGLVQFCCGEVPGFWRRMC---CEGVKPDNFAFSGVLSGLAA 261
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L G QVH ++K G E + +L+DMY K G L ++AF+E+ +DV TWN +
Sbjct: 262 LGDGGMGVQVHGQLVKCGHGGEVCIGNSLVDMYLKCGSLENGIKAFEEMVERDVCTWNQM 321
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ L G A + + M R V
Sbjct: 322 AAGCLNCGKPGRALELIEEMRRSGVRM 348
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 67/160 (41%), Gaps = 14/160 (8%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ H++FD H + S + + + + LF MH+ +N+ +T L ACS
Sbjct: 88 HAHKLFDHFPHRNAVSWSVLIAGFVQHNRPSCALVLFSQMHAAGVNINEFTLVSALHACS 147
Query: 88 ALPAPERGK-------------QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
QV+A +++ G + + M + L E++E F
Sbjct: 148 LYDNDSDNNEGYYYSYYLSRLYQVYAFVVRLGFEWNVFLMNVFMTALIRSRKLAEALEVF 207
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ KDVV+WNA+++ ++ E G ++ M E V+
Sbjct: 208 EACRGKDVVSWNAVMAGLVQF-CCGEVPGFWRRMCCEGVK 246
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 41/76 (53%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G+ +HA +IKG + + +++MY+K G L + + F ++ V+W+ L++ F
Sbjct: 52 QHGRALHAKLIKGPLHNSLFLNNHILNMYAKCGHLPHAHKLFDHFPHRNAVSWSVLIAGF 111
Query: 153 LRHGLAKEAFGVFQAM 168
++H A +F M
Sbjct: 112 VQHNRPSCALVLFSQM 127
>gi|326515584|dbj|BAK07038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 85/151 (56%), Gaps = 13/151 (8%)
Query: 31 QVFDEISHGDLSSLNSQLFSYT------------RSRNFPATWALFCYMHSTCLNLTAYT 78
++F+E+ + + N+ + Y RSR F A LF + + L +T
Sbjct: 153 RLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQA-LKLFRDLVRSELKPDLFT 211
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F+ +L CSA+ A E+G+Q+HA IK G S+ VV +AL++MY+K G + + +AF E+
Sbjct: 212 FSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMP 271
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ VTW +++S + +HG +++A +F+ M
Sbjct: 272 TRTPVTWTSMISGYSQHGRSQDAIQLFEDMV 302
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T V+ C A GKQV A K G ++ VK + M +Y + G E++ F+E
Sbjct: 98 FTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEE 157
Query: 137 IEFKDVVTWNALLSSF 152
++ ++TWNA++S +
Sbjct: 158 MDSSSIITWNAMISGY 173
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L ACSA + G+QVH IK G D+ + +L +Y K G L + AFK K+
Sbjct: 1 MLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKGTPDKN 60
Query: 142 VVTWNALLSS 151
V+TW ++SS
Sbjct: 61 VITWTTMISS 70
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 72/126 (57%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L ++ + + ++ LFC M + + +T+ +L C+ + G+Q+H+L +K
Sbjct: 314 NLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVK 373
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G +S+ V L+DMYSKYG L ++ + ++ KDVV+W ++++ +++H K+A
Sbjct: 374 TGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAA 433
Query: 165 FQAMTR 170
F+ M +
Sbjct: 434 FKEMQK 439
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y ++ F+EI H D + N + + +S +F M
Sbjct: 481 VSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQ 540
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + +TF L A + L ++GKQ+HA +IK G E V AL+ +Y K G +
Sbjct: 541 SGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFED 600
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F E+ ++ V+WN +++S +HG EA F M +E + +
Sbjct: 601 AKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFFDQMKKEGLSY 646
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V + + D+ S S + Y + A F M + + C+ +
Sbjct: 401 RVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIK 460
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G Q+HA + G + + AL+++Y++ G + E+ +F+EIE KD +TWN L+S
Sbjct: 461 AMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVS 520
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F + GL +EA VF M + V+
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVK 544
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ H D + N+ + + + + +F M S+ L+ T + +L AC++L
Sbjct: 199 RVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLG 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G Q+H+ + K G S+ +++ +L+D+Y K G + ++ F +VV WN +L
Sbjct: 259 DLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILV 318
Query: 151 SFLRHGLAKEAFGVFQAM 168
+F + ++F +F M
Sbjct: 319 AFGQINDLAKSFELFCQM 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 47/77 (61%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA I G + +V L+D+YSK GL+ + F+E+ +D V+W A+LS + ++G
Sbjct: 63 EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 157 LAKEAFGVFQAMTRERV 173
L +EA +++ M R V
Sbjct: 123 LGEEALWLYRQMHRAGV 139
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 5/147 (3%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
LP R +VF+E+S D S + L Y ++ L+ MH + T Y +
Sbjct: 94 LPAR-----RVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSS 148
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL +C+ +G+ VHA K G SE V AL+ +Y + G + F ++ +D
Sbjct: 149 VLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRD 208
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
VT+N L+S + + A +F+ M
Sbjct: 209 TVTFNTLISGHAQCAHGEHALEIFEEM 235
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 74/140 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + H + S + + Y+R+ LF M ++ + +T+ V AC+
Sbjct: 67 KVFDGMPHRSVVSWTAMVSGYSRNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAG 126
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+QVHA + KG + V++ALMDM+ + G + ++++ F E+E KDVV WNALL
Sbjct: 127 CVRSGEQVHACVAKGRFVGDVFVQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLR 186
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ +A G+ +M R
Sbjct: 187 GLVERAQYGDALGLLPSMLR 206
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 4 FIRMTNFPAKTCI-SIADALPK-RYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPA- 59
I++ + K I SI DA K R + + + ++D I DL S + + Y+ RN
Sbjct: 239 IIKLGYWGEKVVIGSIIDAYAKCRGLSSARLIYDSICEPDLVSSTALISGYSMDRNHSED 298
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
LFC +H L + + +LG C+ + + G Q+HA M K ++ + A++D
Sbjct: 299 AMELFCKIHRKGLRIDGVLLSSLLGLCANVASLRFGTQIHAYMCKRQPMTDVALDNAVVD 358
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
MY+K G ++ AF E+ +++VV+W +L+++ ++G ++A +F M + V+
Sbjct: 359 MYAKAGEFADARRAFDEMPYRNVVSWTSLITACGKNGFGEDAVSLFDRMVEDGVK 413
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
RG+ VH +I + + T L+ Y+K+G + + + F + + VV+W A++S +
Sbjct: 28 RRGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHRSVVSWTAMVSGY 87
Query: 153 LRHGLAKEAFGVFQAM 168
R+G +EA +F M
Sbjct: 88 SRNGQTREALDLFTLM 103
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 8/138 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA+ Q+F E+ D+ + N+ L + L M +
Sbjct: 160 CGSVVDAM--------QLFAEMERKDVVAWNALLRGLVERAQYGDALGLLPSMLRGAMLP 211
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF L AC A+ + +H +IK G E VV +++D Y+K L + +
Sbjct: 212 DHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSARLIY 271
Query: 135 KEIEFKDVVTWNALLSSF 152
I D+V+ AL+S +
Sbjct: 272 DSICEPDLVSSTALISGY 289
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ + S N+ + Y RS +LF + ++ + T T V+ +C+ L A
Sbjct: 187 VFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGA 246
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK +H + K G D V TAL+DM++K G L +++ F+ + +D W+A++ +
Sbjct: 247 LDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVA 306
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
F HG +A +F+ M RE V
Sbjct: 307 FATHGDGLKAISMFEEMKREGV 328
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 72/147 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ H +FD+I D+ N Y RS + ++LF + + L YTF+ +L AC+
Sbjct: 82 HAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACA 141
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ A G +H +K G + + L++MY++ + + F E+E +V++NA
Sbjct: 142 SSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNA 201
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + R EA +F+ + +E
Sbjct: 202 IITGYARSSQPNEALSLFRELQASNIE 228
>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
Length = 637
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ FDE+ D+ S N+ + +Y +R+F W F M +N + L AC+
Sbjct: 14 VRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPGEVGISIFLSACTD 73
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
G+ + ++ G + E +V+TAL+ MY K G ++ F + +DVV W+A+
Sbjct: 74 AREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRDVVAWSAM 133
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
++++ R+G +EA G+F+ M + V
Sbjct: 134 VAAYARNGHPREALGLFRQMDLDGV 158
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 84/147 (57%), Gaps = 4/147 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ F +I ++ + ++ +Y R+ RN A L M L + TF VL AC+A+
Sbjct: 218 EAFGQIVEKNVVAWSAISAAYARNDRNRDAIRVLH-RMDLEGLVPNSTTFVSVLDACAAI 276
Query: 90 PAPERGKQVH--ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A ++G+++H ++ GG +S+ V TAL++MYSK G L + + F +I D+V WN+
Sbjct: 277 AALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNS 336
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
L+++ +HG ++A +F+ M E ++
Sbjct: 337 LIATNAQHGQTEKALELFERMRLEGLQ 363
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +SH D+ + ++ + +Y R+ + LF M + T L AC++L
Sbjct: 118 VFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGD 177
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G +H + G S VV TAL+++Y K G + +VEAF +I K+VV W+A+ ++
Sbjct: 178 LRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAA 237
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ R+ ++A V M E
Sbjct: 238 YARNDRNRDAIRVLHRMDLE 257
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 81/149 (54%), Gaps = 1/149 (0%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTF 79
+ K V +VFDE+ D+ + L +++++ + LF MH L TF
Sbjct: 208 GVNKEPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTF 267
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
VL AC L ++GK++H +I G S VV+++L+DMY K G + E+ + F +
Sbjct: 268 GTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKSGSVREARQVFNGMPR 327
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K++V+W+ALL + ++G ++A +F+ M
Sbjct: 328 KNIVSWSALLGGYCQNGEHEKAIEMFREM 356
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + ++ S ++ L Y ++ +F M L Y F VL AC+ L
Sbjct: 320 QVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREMEEKDL----YCFGTVLKACAGLA 375
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK++H ++ G +V++AL+D+Y K G + + + ++ ++++TWNA+LS
Sbjct: 376 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYASRVYSKMSVRNMITWNAMLS 435
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G +EA F M ++ ++
Sbjct: 436 ALAQNGRGEEAVSFFNDMVKKGIK 459
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 6/147 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
T +VFD + D S S + Y S+ +F M S L +T + + AC
Sbjct: 115 TRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFE 174
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA---FKEIEFKDVVTW 145
L G+ H ++I G + V+ + L MY G+ E V+A F E+ DV+ W
Sbjct: 175 LGEVRLGRCFHGVVITHGFEWNHVISSTLAYMY---GVNKEPVDARRVFDEMPEPDVICW 231
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRER 172
A+LS+F ++ L +EA G+F AM R +
Sbjct: 232 TAVLSAFSKNDLYEEALGLFYAMHRGK 258
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG-L 126
HS+ ++ + + +L C + + G Q HA ++K G +++ V +L+ +Y K G
Sbjct: 52 HSSEISAKSNLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPD 111
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ E+ F + KD ++W +++S ++ +A VF M
Sbjct: 112 MRETRRVFDGMFVKDAISWTSMMSGYVASKEHVKALEVFVEMV 154
>gi|356495396|ref|XP_003516564.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 516
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
YT VFD IS + N+ L +Y+ S + A L+ M + +YTF +L ACS
Sbjct: 62 YTRVVFDSISSPNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVPHNSYTFPFLLKACS 121
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
AL A E +Q+HA +IK G E +L+ +Y+ G + + F ++ +D+V+WN
Sbjct: 122 ALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNI 181
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++ +++ G A+ +FQAM + V
Sbjct: 182 MIDGYIKFGNLDMAYKIFQAMPEKNV 207
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 66/145 (45%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+++F + ++ S + + + R +L M + + T + L AC+ L
Sbjct: 196 YKIFQAMPEKNVISWTTMIVGFVRIGMHKEALSLLQQMLVAGIKPDSITLSCSLSACAGL 255
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+GK +H + K +PV+ L DMY K G + +++ F ++E K V W A++
Sbjct: 256 GALEQGKWIHTYIEKNEIKIDPVLGCVLTDMYVKCGEMEKALLVFSKLEKKCVCAWTAII 315
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
HG +EA F M + +
Sbjct: 316 GGLAIHGKGREALDWFTQMQKAGIN 340
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMY 121
F M +N + TFT +L ACS E GK + M + +P ++ ++D+
Sbjct: 331 FTQMQKAGINPNSITFTAILTACSHAGLTEEGKSLFESM-SSVYNIKPSMEHYGCMVDLM 389
Query: 122 SKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRH 155
+ GLL E+ E + + K + W ALL++ H
Sbjct: 390 GRAGLLKEAREFIESMPVKPNAAIWGALLNACQLH 424
>gi|302801528|ref|XP_002982520.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
gi|300149619|gb|EFJ16273.1| hypothetical protein SELMODRAFT_116755 [Selaginella moellendorffii]
Length = 694
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+F++ SH +L+S NS + +Y + L M + TF +L AC A
Sbjct: 409 RHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAG 468
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +GK +HA +I G + + VV AL++ YSK G L + F ++++DVV+WN ++
Sbjct: 469 GAVRQGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGII 528
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F +G A+EA M ++ V
Sbjct: 529 AGFAHNGHAREALKSMWLMQQDGV 552
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF E+ DL S N+ + + S ++ T AL M + TF L AC +
Sbjct: 68 VFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRS 127
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+ +HAL+++ G + + V+ TAL+ MY + G L + E F + ++VV+WNA+++S
Sbjct: 128 LSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVAS 187
Query: 152 FLRHGLAKEAFGVFQAMT 169
+ EA +F+ M
Sbjct: 188 CTLNAHFAEAIELFKRMV 205
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL-NLTAYTFTPVLGACSA 88
++F + ++ S N+ + S T + +F LF M + + T +F VL A +
Sbjct: 167 REIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTT 226
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A G+++H ++ + S+ V AL+ MY + G +G++ F +E +D+V+WNA+
Sbjct: 227 REALAEGRRIHEMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAM 286
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
+S++ + GLA E +F M ER
Sbjct: 287 ISAYAQSGLACEVVNLFHRMRAER 310
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 73/136 (53%), Gaps = 2/136 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S N+ + Y ++ + + ++F M + TF +L C + +G+ +H
Sbjct: 316 DVISWNTMITGYVQAGDPFSALSIFKRMLLEGIRGNQVTFMSLLSVCDSRALLRQGETIH 375
Query: 100 ALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+I + S+P+V A+++MY K G L + F++ +++ +WN+++S++ HG
Sbjct: 376 RCVIDQTPELSSDPIVAAAIVNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGR 435
Query: 158 AKEAFGVFQAMTRERV 173
A++AF + + M RE V
Sbjct: 436 AEQAFDLSERMRREGV 451
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYG 125
M + L+ TF +L AC + E GKQ+HA + +S+ V A+M MY K
Sbjct: 1 MAGSSLDPNRVTFLALLEACDSPEFLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCE 60
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++ F E+ +D+++WN +++ G
Sbjct: 61 RADLAMAVFSEMRERDLISWNNAIAANAESG 91
>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
Length = 913
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 71/129 (55%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D S NS + Y + L +M L ++TF +L AC+++ ERG +VH
Sbjct: 504 DEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVH 563
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A I+ +S+ VV +AL+DMYSK G + + F+ + ++V +WN+++S + RHG +
Sbjct: 564 ACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGE 623
Query: 160 EAFGVFQAM 168
+A +F M
Sbjct: 624 KALKLFTRM 632
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP--VLGACSAL 89
VFD I + S NS + Y+R + + + LF M L ++F P S L
Sbjct: 260 VFDGIGIRNSISWNSIISVYSRRGDAVSAYDLFSSMQKEGL---GFSFKPNDAFSEFSVL 316
Query: 90 PAPER-GKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
R G++VHA +I+ G D++ + L++MY+K G + ++ F+ + KD V+WN+
Sbjct: 317 EEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVFELMVEKDSVSWNS 376
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L+S ++ +++A +F M
Sbjct: 377 LISGLDQNECSEDAAEMFSLM 397
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC--S 87
++FDE+S+ +L + + YT++ A F M Y F L AC S
Sbjct: 154 QKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQES 213
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY-SKYGLLGESVEAFKEIEFKDVVTWN 146
+ G Q+H L+ K S+ VV L+ MY S ++ F I ++ ++WN
Sbjct: 214 GPSGCKLGVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWN 273
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+++S + R G A A+ +F +M +E + F
Sbjct: 274 SIISVYSRRGDAVSAYDLFSSMQKEGLGF 302
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L+ TF +L A S+L E Q+HAL++K + + AL+ Y K G + E +
Sbjct: 436 LSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKI 495
Query: 134 FKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + E +D V+WN+++S ++ + L +A + M ++
Sbjct: 496 FARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQK 534
>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + + S N+ + +Y +S +ALF M + L + +L AC+ L
Sbjct: 207 EVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLG 266
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GK +H + K G + + + T ++DMY K G L ++ E F E+ K + +WN ++
Sbjct: 267 ALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEKASEVFNELPQKGISSWNCMIG 326
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
HG + A +F+ M RE V
Sbjct: 327 GLAMHGKGEAAIELFKEMEREMV 349
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VFD+I H D N+ Y R + ++ M ++ +T+ P++ AC
Sbjct: 72 YALEVFDKIPHPDAYIYNTIFRGYLRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACC 131
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A E GKQ+HA ++K G ++ L+ MY + L ++ F + +DVV+W +
Sbjct: 132 IDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTS 191
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L++ + + G +A VF+ M
Sbjct: 192 LITGYSQWGFVDKAREVFELM 212
>gi|347954480|gb|AEP33740.1| chlororespiratory reduction 21, partial [Matthiola maderensis]
Length = 807
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFD I + + N+ + Y ++ + L M
Sbjct: 183 CVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMYEEAIRLLSEMR 242
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GKQ HA+ I G + + ++ T++++ Y K GL+
Sbjct: 243 KEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIE 302
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL +EA + Q M RE ++F
Sbjct: 303 YAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKF 349
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ + N + Y + + M L T + ++ A +
Sbjct: 303 YAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAAT 362
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + GK++ I+ G +S+ V+ + +DMY+K G + + + F KD++ WN
Sbjct: 363 STQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNT 422
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LLS++ GL+ EA +F M E V
Sbjct: 423 LLSAYADSGLSGEALRLFYEMQLESV 448
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH + K G V ++L DMY K G+L ++ + F I ++
Sbjct: 155 VCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRN 214
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V WNAL+ ++++G+ +EA + M +E +E
Sbjct: 215 AVAWNALMVGYVQNGMYEEAIRLLSEMRKEGIE 247
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYG 125
M + L A+T T L AC L + G+ +H +I+ S ++T+L+DMY+K G
Sbjct: 513 MQESGLRPNAFTITVALSACVNLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCG 572
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ F ++ +NA++S++ +G +EA +++++
Sbjct: 573 DINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 615
>gi|356551361|ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Glycine max]
Length = 688
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 67/129 (51%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N + Y ++ + + LF M L YT +L ACS L +RGKQVHA I+
Sbjct: 374 NGIIAGYVENKQYDSAMQLFTEMQIANLRPDIYTVGIILAACSRLATIQRGKQVHAYSIR 433
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G DS+ + AL+DMY+K G + + I ++V+ NA+L+++ HG +E +
Sbjct: 434 AGHDSDVHIGAALVDMYAKCGDVKHCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIAL 493
Query: 165 FQAMTRERV 173
F+ M +V
Sbjct: 494 FRRMLASKV 502
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 31 QVFDEISH----GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
++FD + D S NS + Y F ++LF + + ++T VL C
Sbjct: 220 ELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIEPDSFTLGSVLAGC 279
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + RGK+ H+L I G S +V AL++MYSK + + AF + +D+ TWN
Sbjct: 280 ADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQDIVAAQMAFDGVSERDLPTWN 339
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AL+S + R A++ + Q M R+ E
Sbjct: 340 ALISGYARCNQAEKIRELHQKMRRDGFE 367
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 5/131 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++V++ IS+ +L S N+ L +Y + ALF M ++ + TF VL +C
Sbjct: 458 HCYRVYNMISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCV 517
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
+ E G + ALM+ + P +K T ++D+ S+ G L E+ E K + + D VT
Sbjct: 518 HAGSLEIGHECLALMV--AYNVMPSLKHYTCMVDLLSRAGQLYEAYELIKNLPTEADAVT 575
Query: 145 WNALLSSFLRH 155
WNALL H
Sbjct: 576 WNALLGGCFIH 586
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK-------------TALM 118
+ L + F VL C L A E G+Q+H + +K D + + A++
Sbjct: 147 VRLDFFVFPVVLKICCGLCAVELGRQMHGMALKHDGDMKSAFEMFSRFSRKSAASYNAMI 206
Query: 119 DMYSKYGLLGESVEAFKEIEF----KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y + G L ++ E F +E KD ++WN+++S ++ L EA+ +F+ + +E +E
Sbjct: 207 AGYWENGNLFKAKELFDRMEQEGVQKDRISWNSMISGYVDGSLFDEAYSLFRDLLKEGIE 266
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++ T+ +L +C + P GKQ+HA IK G ++ V T L+ MY++ + F
Sbjct: 50 SSTTYASILDSCGS---PILGKQLHAHSIKSGFNAHEFVTTKLLQMYARNCSFENACHVF 106
Query: 135 KEIEFKDVVTWNALLSSFLRHG 156
+ +++ +W ALL ++ G
Sbjct: 107 DTMPLRNLHSWTALLRVYIEMG 128
>gi|255536747|ref|XP_002509440.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549339|gb|EEF50827.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 678
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E DL + S + +Y++ L+ M + ++ + +L AC+ L
Sbjct: 497 RIFQESPFVDLVAFTSMITAYSQDGQGEEALKLYLEMQDRKIRPDSFVCSSLLNACANLS 556
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQVH ++K G S+ +L++MY+K G + ++ AF EI + +V+W+A++
Sbjct: 557 AYEQGKQVHVHVLKFGFISDIFAGNSLVNMYAKCGSIDDADRAFSEIPERGIVSWSAMIG 616
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
F +HG KEA +F M + +
Sbjct: 617 GFAQHGHGKEALQLFNRMLEDGI 639
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 80/147 (54%), Gaps = 4/147 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACSA 88
+VF+EI+ D+ S N+ + + R + WAL F M+ + + +T + L AC+
Sbjct: 295 RVFEEIAKPDIVSWNA-IIAGCALREYHC-WALELFGKMNRSGMCPNMFTISSALKACAG 352
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ E G+Q+H+ ++K S+ + L+DMYSK L+ ++ F + +D++ WNA
Sbjct: 353 MGLKELGRQLHSSLLKMDIRSDSFLAVGLIDMYSKCDLMTDARLLFNLMPERDLIVWNAA 412
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ ++G EA +F +M +E V F
Sbjct: 413 ITGHSQNGEDLEAVSLFPSMHKEGVGF 439
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 3/90 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
++ + ++ AC+ L +G+++H +IK D + AL+DMY+K G L E++ F+E
Sbjct: 240 FSLSCMINACTGLEDSSQGRKIHGYLIKLAYDLDLFSANALVDMYAKVGTLEEAIRVFEE 299
Query: 137 IEFKDVVTWNALLSSF-LR--HGLAKEAFG 163
I D+V+WNA+++ LR H A E FG
Sbjct: 300 IAKPDIVSWNAIIAGCALREYHCWALELFG 329
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
HST ++++ ++ +L C+A A GK++HA +IK G +P ++ L+++YSK
Sbjct: 101 HSTPISIS---YSNLLFQCTASKASTPGKEIHARVIKLGLSQDPKIRNLLINLYSKCQFF 157
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + E D+V+W+AL+S + ++G KEA F M
Sbjct: 158 KYARKMVDESTEPDLVSWSALISGYSQNGFGKEAISAFYEM 198
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 71/142 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + DL N+ + ++++ +LF MH + T + VL + ++L
Sbjct: 397 LFNLMPERDLIVWNAAITGHSQNGEDLEAVSLFPSMHKEGVGFNQITLSTVLKSVASLQV 456
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
Q+HAL +K G + V +L+D Y K G + ++ F+E F D+V + +++++
Sbjct: 457 DHICSQIHALSLKSGFQFDNYVANSLIDTYGKCGRIKDATRIFQESPFVDLVAFTSMITA 516
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ + G +EA ++ M ++
Sbjct: 517 YSQDGQGEEALKLYLEMQDRKI 538
>gi|125588673|gb|EAZ29337.1| hypothetical protein OsJ_13404 [Oryza sativa Japonica Group]
Length = 557
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 78/151 (51%), Gaps = 4/151 (2%)
Query: 28 YTHQVFDEI----SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
Y H +FD + + D N + Y R AL+ M + +TFT L
Sbjct: 167 YAHHLFDHLLPARAREDAFPWNCLIAGYARLGRHEDALALYLQMEEETVPRDRFTFTSAL 226
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+ + + E G +H +++ G S+ V AL+D+Y+ +G + +++ F + +D V
Sbjct: 227 QACAGVGSVELGHAIHRDVVRAGLASDVPVCDALVDLYATFGDVRRALQVFDAMPDRDGV 286
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+WN +L+ LRHGL+++A +++ M RE E
Sbjct: 287 SWNIMLAGCLRHGLSQQALELWRRMLREEHE 317
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G ++HA I+ G ++E V AL+ MYS ++ F+ + +D+ +WNA++S+ L+
Sbjct: 340 GLEIHAWAIRHGLETELSVANALIRMYSDKNEQSHALLVFESMTMRDLQSWNAIISAHLQ 399
>gi|449520819|ref|XP_004167430.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 406
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEI L + + + +Y RS + +A F M + Y +L ACS
Sbjct: 123 KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSRRQ 182
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK H I+ S+ V++ ALMD Y G L S+ F + KDVV+W AL+S
Sbjct: 183 MVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVS 242
Query: 151 SFLRHGLAKEAFGVFQAM 168
+++ GL EA VF +M
Sbjct: 243 AYIEEGLLNEAMEVFHSM 260
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
N + T +L AC+ L G+ VHA +K + V+ +L+DMYSK G + E
Sbjct: 336 NPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEE 395
Query: 133 AFKEIEFKDV 142
F + E K++
Sbjct: 396 IFAKAEKKNI 405
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E ++ S N+ + Y+ + F LF M + T VL AC+ +
Sbjct: 226 RVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLSACAHVG 285
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+ VHA + K G + V TAL+DMYSK G + +++E F KD+ TWN+++S
Sbjct: 286 ALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDISTWNSIIS 345
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
HG + A +F M E
Sbjct: 346 GLSTHGSGQHALQIFSEMLVE 366
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 4/158 (2%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
S A A+P Y H +F I + + N+ + +Y S A +F M +
Sbjct: 53 SHAQAIP----YAHSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDK 108
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTFT L +C + E G+Q+H ++K G + ++ L+ +Y+ G + ++
Sbjct: 109 YTFTFALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDR 168
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +DVV+WNALLS++ GL + A +F MT VE
Sbjct: 169 MLERDVVSWNALLSAYAERGLMELACHLFDEMTERNVE 206
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI AL +VF+ D+S+ NS + + + +F M
Sbjct: 319 CGSIEKAL--------EVFNSCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKP 370
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TF VL ACS + G+++ LM+ +P ++ ++D+ + GLL E+ E
Sbjct: 371 NEVTFVCVLSACSRAGLLDEGREMFNLMVH-VHGIQPTIEHYGCMVDLLGRVGLLEEAEE 429
Query: 133 AFKEIEFKDV-VTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ K+ V W +LL + HG + A V Q +
Sbjct: 430 LVQKMPQKEASVVWESLLGACRNHGNVELAERVAQKL 466
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ Y GLL E+ F E K+VV+WNA+++ + G E +F+ M V+
Sbjct: 211 MISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVK 268
>gi|410110039|gb|AFV61099.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
salviifolia]
Length = 372
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVXMYLKSNSRNVEDALKIFXHINXKDLVSWNTILTGLSQNGLSENALRLFQNIHX 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L Y F VL +CS L + G+Q+H L++K + V +AL+ MYSK G++ +
Sbjct: 255 DXLVXDQYXFAAVLRSCSDLATLQLGRQIHVLVVKSXFEGNXYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ E+F+ + VTWN+++ ++ +HG K A + MT R++
Sbjct: 315 AWESFESXHKETSVTWNSIIFAYAQHGQGKIALDLXYLMTERRIKL 360
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N ALF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIXGYAEMGNLERCVALFXGMEMEGVXVDDATFAPJL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + +Q+H ++K G + E V A + Y++ G + ++ F + F+D+
Sbjct: 64 XLLNDAESYXLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKRVFDSSDGFRDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 124 VTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLE 155
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SDGFRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVRQRLEMDAYTLSSVISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++++ F I KD+V+WN
Sbjct: 171 DTQQSLGKSLHGFVIKKGLDQVTQISNALVXMYLKSNSRNVEDALKIFXHINXKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQ 166
+L+ ++GL++ A +FQ
Sbjct: 231 TILTGLSQNGLSENALRLFQ 250
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + ++ LF M T + T VL AC+
Sbjct: 152 QEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQS 211
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH+ + G S + AL+D+YSK G + + F+ + KDVV+WN L+
Sbjct: 212 RSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLI 271
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 272 GGYTHMNLYKEALLLFQEMLR 292
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ I +AL Y QV F+ +S D+ S N+ + YT + LF M
Sbjct: 233 LKIVNALIDLYSKCGQVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLR 292
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLL 127
+ + T +L AC+ L A + G+ +H + K D + P ++T+L+DMY+K G +
Sbjct: 293 SGESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDI 352
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F + K + +WNA++ F HG A F +F M + +E
Sbjct: 353 EAAHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIE 399
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 31/179 (17%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
+ Y VF I + N+ L Y S + + L+ M S L +YTF +L +
Sbjct: 16 FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKS 75
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES--------------- 130
C+ A E G+Q+H ++K G + + V T+L+ MY++ G L ++
Sbjct: 76 CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135
Query: 131 ----------------VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E F EI KDVV+WNA++S + G KEA +F+ M + V
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNV 194
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 4/130 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVF+ + H LSS N+ +F + A + LF M + TF +L ACS
Sbjct: 356 HQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHS 415
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
+ G+ + M + D P ++ ++D+ GL E+ E K + + D V W
Sbjct: 416 GKLDLGRHIFKSMTQ-DYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWC 474
Query: 147 ALLSSFLRHG 156
+LL + RHG
Sbjct: 475 SLLKACRRHG 484
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 80/145 (55%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD + D S +S + Y ++ LF + L + ++T + V+GA
Sbjct: 601 VLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAV 660
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L + + G Q+HA + K G ++E V ++L+ MYSK G + E + F++IE D+++W
Sbjct: 661 AILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWT 720
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++ S+ +HG EA V+ M +E
Sbjct: 721 AMIVSYAQHGKGAEALKVYDLMRKE 745
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 79/142 (55%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V+ ++FD+ H ++ S N + ++ +F +W FC M + + +T+ VL AC
Sbjct: 98 VHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSAC 157
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+AL +P G+ V++L +K G S V+ ++D+++K +++ F+++ ++VV WN
Sbjct: 158 TALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWN 217
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++S +++ A +F M
Sbjct: 218 AIISGAVKNRENWVALDLFCQM 239
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
M + AK C S DAL +VF ++ ++ N+ + ++R LFC
Sbjct: 188 MIDLFAKLC-SFEDAL--------RVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQ 238
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M ++TF+ +L AC+AL E G+ V +IK G + V TA++D+Y+K
Sbjct: 239 MCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRD 298
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ ++V+ F + ++VV+W ++S F++ + AF F+ M +
Sbjct: 299 MDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRK 342
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ YT T VL AC+ + Q+H+ + K G + V +AL++MYSK G++ S
Sbjct: 347 INNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERV 406
Query: 134 FKEIE-FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+E+E K++ W ++S+F + G A +FQ M +E
Sbjct: 407 FREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQE 445
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 70/140 (50%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ VF+++ D S S + ++ + LF M + T T L ACSA
Sbjct: 502 SYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSA 561
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + E+GK+VH ++ E +V AL++MYSK G + + F + KD + ++L
Sbjct: 562 LHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSL 621
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S + ++G ++A +F +
Sbjct: 622 VSGYAQNGYIEDALLLFHEI 641
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 50/87 (57%)
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S + + G+ +H ++K G ++ V ++L MYSK G L ES F+++ KD V+W
Sbjct: 459 SIIDSLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWA 518
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
++++ F H A++A +F+ M E +
Sbjct: 519 SMITGFSEHDHAEQAVQLFREMLLEEI 545
>gi|347954532|gb|AEP33766.1| organelle transcript processing 82, partial [Lepidium virginicum]
Length = 464
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEI D+ S N+ + Y + N+ L+ M T + T V+ AC+
Sbjct: 160 KLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEMVKTNVKPDESTMVTVVSACAQSS 219
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVH+L+ G S V ALMDMYSK G + + F+ + KD ++WN L+
Sbjct: 220 NIELGRQVHSLIEDHGFGSNLKVVNALMDMYSKCGEMETACRLFQGLVNKDAISWNTLIG 279
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
L KEA +FQ M R
Sbjct: 280 GHTHMNLYKEALFLFQEMLR 299
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 4/147 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + D S N+ + +T + LF M + + T VL AC+ L
Sbjct: 261 RLFQGLVNKDAISWNTLIGGHTHMNLYKEALFLFQEMLRSGESPNDVTMLSVLSACAHLG 320
Query: 91 APERGKQVHALM---IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A + G+ +H + +KG T+S + +T+L+DMY+K G + + + F + + + +WNA
Sbjct: 321 AIDIGRWIHVYIDKRLKGVTNSSSL-RTSLIDMYAKCGDIEAASQVFDSMLARSLSSWNA 379
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ F HG A AF +F M + +E
Sbjct: 380 MIFGFAMHGKANAAFDLFSKMRKSGIE 406
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I +L N+ + + + + L+ M S L +Y+F
Sbjct: 21 DGLP----YAISVFETIEEPNLLIWNTMFRGHALNSDSVSALKLYVCMISLGLLPNSYSF 76
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA------ 133
+L +C+ A G+Q+H ++K G D + V T+L+ MY++ G L ++ +
Sbjct: 77 PFLLKSCAKSKAFREGQQIHGHVVKLGYDLDMYVHTSLISMYAQNGRLEDAHKVFDRSSH 136
Query: 134 -------------------------FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F EI KD+V+WNA++S ++ KEA +++ M
Sbjct: 137 RHVVSYTALITGYASRGYTKSARKLFDEILVKDIVSWNAMISGYVETFNYKEALELYKEM 196
Query: 169 TRERVE 174
+ V+
Sbjct: 197 VKTNVK 202
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD +S +L S N+ + + L+ +M + + T VL AC+ L
Sbjct: 284 RIFDGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLG 343
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G++VH + + G D ++ TAL+DMY+K G + ++ F + KDV WNA++
Sbjct: 344 ALELGREVHLYLGRNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMIL 403
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
HG +++ VF M R V+
Sbjct: 404 GLAYHGDGRDSLAVFSQMVRAGVQ 427
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y V D+ S NS + +YT + + L+ M + + +TF VL ACS
Sbjct: 45 YARFVLDQTPSPTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACS 104
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G+Q+H +++ G S+ V +L+DMY K L + + ++ F+D V+WN+
Sbjct: 105 TLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNS 164
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRER 172
++S +++ G ++A +F+ M R
Sbjct: 165 IISGYVQWGQVEKARDLFEEMPMRR 189
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 54/100 (54%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A T +L ACS L E G+ + + ++ TAL+DMYSK G + ++ F
Sbjct: 227 NAATMVCLLSACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIF 286
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ K++ +WNA+++ ++ GL +EA +++ M + V+
Sbjct: 287 DGVSCKNLPSWNAIITGCVQGGLLEEAIDLYRHMKAQSVK 326
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 1/166 (0%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
+ M +F A + +S+ K + Y F+ + + N+ L Y+++ +LF
Sbjct: 548 LEMNSFVAVSLLSLYFHCSKPF-YGRTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLF 606
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M S L +LGACS L A GK+VH +K + V +LMDMY+K
Sbjct: 607 RQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKS 666
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
G LG S F + K+V +WN +++ F HG +A +F+ M R
Sbjct: 667 GFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKR 712
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 2/144 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT--AYTFTPVLGACSA 88
++FD++ +L S NS + ++ + + + F + + L T +L CS
Sbjct: 266 ELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSG 325
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ G +H + +K G E +V AL+DMYSK G L E+ F++IE K VV+WN++
Sbjct: 326 EGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSM 385
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
+ ++ R G E F + + M E
Sbjct: 386 IGAYSREGFVFETFDLLRKMWMEE 409
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSALP 90
VFD + + +L N+ + Y R+ + F + S T +TF ++ AC+
Sbjct: 165 VFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKC 224
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH + +K G + V A++ +Y K G L E+VE F ++ +++++WN+L+
Sbjct: 225 DIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIR 284
Query: 151 SFLRHGLAKEAFGVFQAM 168
F +G EA+ F+++
Sbjct: 285 GFSENGFWLEAYRAFRSL 302
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 4/150 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV--LG 84
V+ VF ++ +SS N+ + + ++N AL Y T L + F+ V L
Sbjct: 468 VFAEHVFFGMNTKSVSSWNAVIGGH--AQNGDPIKALDFYFEMTRLGILPDDFSIVSLLL 525
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC L + GK++H +++ G + V +L+ +Y F+ + K+ V
Sbjct: 526 ACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVC 585
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WNA+LS + ++ L EA +F+ M + +E
Sbjct: 586 WNAMLSGYSQNELPNEALSLFRQMLSDGLE 615
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 82 VLGACSALPAPERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L C E G+++ ++ + + V+ T L+ MYS G ES F + K
Sbjct: 113 LLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNK 172
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVF 165
++ WNAL+S ++R+ L EA F
Sbjct: 173 NLFQWNALVSGYVRNELYDEAIHTF 197
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 61/141 (43%), Gaps = 2/141 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALF--CYMHSTCLNLTAYTFTPVLGACSAL 89
+F +I + + S NS + +Y+R T+ L +M + + T +L AC
Sbjct: 370 LFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTILNLLPACLEE 429
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +H ++ + ++ A + Y+K G L + F + K V +WNA++
Sbjct: 430 SELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVI 489
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
++G +A + MTR
Sbjct: 490 GGHAQNGDPIKALDFYFEMTR 510
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VF + + S N+ L + + + LFC M + +N + +T + VL C
Sbjct: 281 VLAERVFLCMPKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGC 340
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G+ VH+L I+ G + + + L+DMYSK GL G++++ F IE DVV+W+
Sbjct: 341 ANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPDVVSWS 400
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ + G ++EA VF+ M V
Sbjct: 401 AIITCLDQKGQSREAAEVFKRMRHSGV 427
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ ++ DL S N+ L + + +F M + N YTF +L +CS+L
Sbjct: 487 RVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLS 546
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQVHA ++K D V TAL+DMY+K L ++ F + +D+ W +++
Sbjct: 547 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVA 606
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + G ++A F M RE V+
Sbjct: 607 GYAQDGQGEKAVKCFIQMQREGVK 630
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF EI D+ S + + + LFC M + +T+ L ACS
Sbjct: 181 YACKVFGEIPERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACS 240
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
E GKQVHA IK G S+ V +AL+D+Y+K G + + F + ++ V+WNA
Sbjct: 241 MCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNA 300
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVEF 175
LL+ F + G A++ +F MT + F
Sbjct: 301 LLNGFAQMGDAEKVLNLFCRMTGSEINF 328
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + DL + + Y + F M + +T L CS +
Sbjct: 589 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 648
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H++ IK G + V +AL+DMY+K G + ++ F + +D V+WN ++
Sbjct: 649 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 708
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ +HG +A F+AM E
Sbjct: 709 YSQHGQGGKALKAFEAMLDE 728
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 53/96 (55%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
++ +L C++ GK +H +IK G + + + +L+++Y+K G + + F EI
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+DVV+W AL++ F+ G A +F M RE VE
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVE 226
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 62/141 (43%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF I D+ S ++ + + +F M + + +T ++ A + L
Sbjct: 386 KVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLG 445
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ +HA + K G + + V AL+ MY K G + + F+ +D+++WNALLS
Sbjct: 446 DLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLS 505
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F + +F M E
Sbjct: 506 GFHDNETCDTGLRIFNQMLAE 526
>gi|449458139|ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 677
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEI L + + + +Y RS + +A F M + Y +L ACS
Sbjct: 123 KVFDEIPERTLPAYAALIRAYCRSEKWNELFAAFRSMVDEGILPDKYLVPTILKACSRRQ 182
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK H I+ S+ V++ ALMD Y G L S+ F + KDVV+W AL+S
Sbjct: 183 MVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVS 242
Query: 151 SFLRHGLAKEAFGVFQAM 168
+++ GL EA VF +M
Sbjct: 243 AYIEEGLLNEAMEVFHSM 260
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+GK++H M++ + + +AL++MY+K G + +++ F I+ ++VV WNAL++ L
Sbjct: 538 KGKEIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLL 597
Query: 154 RHGLAKEAFGVFQAMTRERVE 174
R K A +F M E ++
Sbjct: 598 RTMQHKMAVELFCQMLVEGIK 618
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
N + T +L AC+ L G+ VHA +K + V+ +L+DMYSK G + E
Sbjct: 336 NPNSVTVASILPACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEE 395
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + E K++ WN ++++++ G A F++M
Sbjct: 396 IFAKAEKKNITLWNEIIATYMNQGKNSWALEHFRSM 431
>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 902
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF +L ACS + A GK++H L+IK G S +A++DMYSK G + S EAFKE+
Sbjct: 608 TFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKEL 667
Query: 138 EFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ K D+ WN+++ F ++G A EA +FQ M +++
Sbjct: 668 KSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIK 705
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 9/167 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C I DA+ VFD ++ N+ L R+ +F Y
Sbjct: 241 LINLYAK-CGCIGDAIL--------VFDCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLY 291
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M L +T+ VLGAC+ L + G+QV + IK D+ V A +DM+SK+G
Sbjct: 292 MKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLDMHSKFGA 351
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ ++ F I +KD V+WNALL + +EA + + M + V
Sbjct: 352 IDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGV 398
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 69/140 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ I++ D S N+ L T + + M+ + +F V+ ACS + A
Sbjct: 358 LFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRA 417
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+H L +K S V ++L+D YSK+G + + +++ +V N L++
Sbjct: 418 TETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQVDASSIVPRNVLIAG 477
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+++ EA +FQ + R+
Sbjct: 478 LVQNNREDEAIDLFQQVLRD 497
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T TF +L A + A G+QVHA ++ G D+ V ++L+++Y+K G +G+++ F
Sbjct: 199 TRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVF 258
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K+VV WNA+L+ +R+ EA +F M R +E
Sbjct: 259 DCSGEKNVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLE 298
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ L ACS L A GKQ H K G S AL++MY++ G +G++ F
Sbjct: 32 FDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDARRVFGG 91
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I D V W +++S + R G +EA +F M +
Sbjct: 92 ISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEK 125
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGES 130
L +++TF+ +L C+ L + GKQVH +K G + + V +L+ Y K + ++
Sbjct: 499 LKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDA 558
Query: 131 VEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ E+ + K++V W A++S + ++G + ++ F M
Sbjct: 559 NKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRM 597
>gi|356498888|ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 552
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 79/150 (52%), Gaps = 3/150 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPVLGA 85
Y HQ+FD + + S L + L S + Y MH + + +TF+ +L A
Sbjct: 62 YAHQLFDTMPNCPSSFLWTSLIRALLSHQAHLHHCISTYSRMHQNGVLPSGFTFSSILSA 121
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C +PA GKQVHA +++ G +V+TAL+DMY+K G + ++ F ++ +DVV W
Sbjct: 122 CGRVPALFEGKQVHARVMQSGFHGNKIVQTALLDMYAKSGCISDARAVFDGMDDRDVVAW 181
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
A++ + + G+ +A +F M ER F
Sbjct: 182 TAMVCGYAKVGMMVDAQWLFDKMG-ERNSF 210
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + +T + AC+ L + + +G D +V TAL+ M+SK G
Sbjct: 298 MREAKIKITEVAMVGAISACAQLRDIRMSNTLTGHLEEGCCDRTHIVSTALIHMHSKCGN 357
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ F + ++DV T++A++++F HG +++A +F M +E
Sbjct: 358 INLALSEFTTMRYRDVYTYSAMIAAFAEHGKSQDAIDLFLKMQKE 402
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 79/147 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
++ + ++FDEI ++ S N+ Y + LF M + + ++ + ++
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVN 266
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ L RGK +H +IK G D +P AL+DMY+K G L +++ F++I+ D+V+
Sbjct: 267 ACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVS 326
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WNA+++ + H ++A + M R+
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQMKRQ 353
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E + GDL S S + +Y + LF M L + + +L AC+ L
Sbjct: 489 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 548
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+H ++K G + +L++MY+K G + ++ AF E+ + +V+W+A++
Sbjct: 549 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 608
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+HG ++A +F M +E V
Sbjct: 609 GLAQHGHGRQALQLFNQMLKEGV 631
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+ + Y ++ DE S DL S ++ + Y ++ F MH + +TF+ VL
Sbjct: 105 RXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS + GKQVH +++ G + + V L+ MY+K +S F EI ++VV
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMT 169
+WNAL S +++ EA G+F M
Sbjct: 225 SWNALFSCYVQXDFCGEAVGLFYEMV 250
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + DL + N+ + Y++ +LF MH + T + +L + + L
Sbjct: 390 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 449
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+QVH L +K G S+ V +L+D Y K + ++ F+E D+V++ ++++++
Sbjct: 450 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 509
Query: 153 LRHGLAKEAFGVFQAM 168
++G +EA +F M
Sbjct: 510 AQYGQGEEALKLFLEM 525
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 58 PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL 117
P T A+ + T+ +++ +L C + G Q+HA + K G +P ++ L
Sbjct: 38 PQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHL 97
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++YSK G + + E D+V+W+AL+S + ++GL A F M
Sbjct: 98 INLYSKCRXFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM 148
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+H+ ++K +S+ V L+DMYSK LL ++ AF + KD++ WNA++S + ++
Sbjct: 352 RQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQY 411
Query: 156 GLAKEAFGVFQAMTRERVEF 175
EA +F M +E + F
Sbjct: 412 WEDMEALSLFVEMHKEGIGF 431
>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 776
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 85/150 (56%), Gaps = 13/150 (8%)
Query: 31 QVFDEISHGDLSSLNSQLFSYT------------RSRNFPATWALFCYMHSTCLNLTAYT 78
++F+E+ + + N+ + Y RSR F A LF + + L +T
Sbjct: 335 RLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQA-LKLFRDLVRSELKPDLFT 393
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F+ +L CSA+ A E+G+Q+HA IK G S+ VV +AL++MY+K G + + +AF E+
Sbjct: 394 FSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMYNKCGSIECATKAFVEMP 453
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ VTW +++S + +HG +++A +F+ M
Sbjct: 454 TRTPVTWTSMISGYSQHGRSQDAIQLFEDM 483
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YT +L ACSA + G+QVH IK G D+ + +L +Y K G L + AFK
Sbjct: 178 YTLGGMLSACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCKSGDLESGLRAFKG 237
Query: 137 IEFKDVVTWNALLSS 151
K+V+TW ++SS
Sbjct: 238 TPDKNVITWTTMISS 252
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
+LF M + +T T V+ C A GKQV A K G ++ VK + M +Y
Sbjct: 265 SLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNSTMYLY 324
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G E++ F+E++ ++TWNA++S +
Sbjct: 325 LRKGETDEAMRLFEEMDSSSIITWNAMISGY 355
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ P+L C + +H M+K GT ++ V T+L+++Y + ++ F +
Sbjct: 79 YVPLLHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMP 138
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+VVTW AL++ + A VF M
Sbjct: 139 DKNVVTWTALITGHTLNSEPALALEVFVEM 168
>gi|357153087|ref|XP_003576334.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Brachypodium distachyon]
Length = 531
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ D S NS + YT+ + +F M + + T T VLGAC+ +
Sbjct: 243 RVFREMPGRDAVSWNSLIGGYTKLGRYVQALEVFREMQDSGVEPTELTLVSVLGACAEIG 302
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK VH + G ++ V AL+DMY+K G L + + F+ + +D+ WNA++
Sbjct: 303 ELELGKGVHGYIGSKGVVADGYVGNALVDMYAKCGSLELARQLFESMSTRDITCWNAMIV 362
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F HG +++A +F AM E
Sbjct: 363 GFSVHGYSRKALELFDAMRVE 383
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+G ++H ++K G + V+ AL+ MY K G LG++ + F + ++ V+WNAL+++
Sbjct: 143 KGMELHGRVLKLGCGGDRYVQNALVSMYGKLGRLGDARKVFDGMPARNAVSWNALVAA-- 200
Query: 154 RHGLAKEAFGVFQAMTRERVE 174
HG + GV + ++RE E
Sbjct: 201 -HGATGDLHGV-ELLSREMPE 219
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I + ++L YV ++ FDE+S D+ S + + M +
Sbjct: 452 ICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALKVIYEMKN 511
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ L +T L +C+ L + E GK+ H L IK GTD + V AL+DMY+K G +
Sbjct: 512 VGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTS 571
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ ++ + VV+W ++ F +G KEA +F M + E
Sbjct: 572 ANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAE 616
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNF--PATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VF+ D S N+ + Y + F P W M+ + +TF +L +A
Sbjct: 373 EVFESCLSKDTVSWNAMMAGYLQLAYFELPKFWR---RMNLESVKPDNFTFASILTGLAA 429
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L G QVH ++K G ++ V +L DMY K L + +AF E+ DV +W +
Sbjct: 430 LSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQM 489
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ L+ G +A V M
Sbjct: 490 AAGCLQCGEPMKALKVIYEM 509
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVL 83
R Y Q+FDE+ ++ S ++ + + + +LF MH + +T L
Sbjct: 265 RLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSAL 324
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS Q++A +++ G S + A + ++ L E++E F+ KD V
Sbjct: 325 HACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTV 384
Query: 144 TWNALLSSFLR 154
+WNA+++ +L+
Sbjct: 385 SWNAMMAGYLQ 395
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ L C G +HA +KG +++ Y K G L ++ F E+
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++VV+W+A+++ F++HG EA +F M
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRM 307
>gi|297601149|ref|NP_001050436.2| Os03g0435200 [Oryza sativa Japonica Group]
gi|255674619|dbj|BAF12350.2| Os03g0435200 [Oryza sativa Japonica Group]
Length = 594
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F ++ D + N+ + Y RS LF + T +TF VL S
Sbjct: 295 LFKGMATWDSETCNAMISGYARSGLMEQALGLFTMALQNGILPTGFTFASVLRWSSCFGL 354
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G Q+HAL+ K G + + ++ TAL+DMY K L + + F + FKD+V WN ++
Sbjct: 355 VEQGTQIHALIFKLGLEDDLIIATALVDMYCKLASLKHAKKIFSRVSFKDLVLWNTMIIG 414
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+G KEA VF+ M + ++
Sbjct: 415 LSHNGRGKEALQVFRQMLKCNIQ 437
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D + NS + Y +L M + + +TF+ +L SA+
Sbjct: 94 RLFDEMPDRDAVAYNSMMSGYIDGGRNNEALSLVWTMLEAGVRPSGFTFSIIL---SAVR 150
Query: 91 APERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G QVHA ++ VV AL++MY + GLL +V+ F + D+V+WN+++
Sbjct: 151 VARHGVQVHAAAVRHCFAHQNSVVGNALINMYRRVGLLEYAVQVFWSMNGHDIVSWNSVM 210
Query: 150 SSFLRHGLAKEAFGVFQ 166
S + G ++ F F+
Sbjct: 211 SVYRDDGQRRQVFECFR 227
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y QVF ++ D+ S NS + Y + F + S L + + VL AC
Sbjct: 190 YAVQVFWSMNGHDIVSWNSVMSVYRDDGQRRQVFECFRMIRSHGLFFDECSLSTVLSACI 249
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+G Q+ +K G ++ +A++ + L ++V FK + D T NA
Sbjct: 250 DAEDSSKGDQLLTHCVKMGLLRNSLICSAVIGLLCASDRLADAVYLFKGMATWDSETCNA 309
Query: 148 LLSSFLRHGLAKEAFGVF 165
++S + R GL ++A G+F
Sbjct: 310 MISGYARSGLMEQALGLF 327
>gi|224058579|ref|XP_002299552.1| predicted protein [Populus trichocarpa]
gi|222846810|gb|EEE84357.1| predicted protein [Populus trichocarpa]
Length = 505
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%), Gaps = 8/140 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+FD +S L + N + Y ++ LF M +T VL ACS L
Sbjct: 213 QMFDRMSKRSLVTWNCLIDGYVKAGLLMEARELFDQMR--------FTMVSVLTACSYLG 264
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+G+ + A + K G D V+ TAL++M++K G + ++ FK IE +DV WN+++
Sbjct: 265 ALEQGEWMQAHIEKNGIDVNSVLGTALVEMFAKCGSIERALSVFKSIEERDVGAWNSIIH 324
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
HG +EAF +F M R
Sbjct: 325 KLAAHGHGQEAFAIFSDMLR 344
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL ACS + A E GKQVH L+ K G + V+ +L+ MYS GL+G + + F +I
Sbjct: 128 TFPFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLISMYSSCGLIGFACQVFNKI 187
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ DVV+WN+++S + G +E +F M++
Sbjct: 188 DDPDVVSWNSMISGLVDLGFVEEGKQMFDRMSK 220
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 74/144 (51%), Gaps = 4/144 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN----LTAYTFTPVLGACS 87
+FD++ D S NS + Y++ LFC M ++C N ++ +T VL AC
Sbjct: 98 LFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACG 157
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L GK VH +K G DS+ V + + MY K G+L + AF +IE KD+V WN
Sbjct: 158 GLGCSRIGKCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNT 217
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
+++ + ++ +EA +F M E
Sbjct: 218 MITGYAQNCYEEEAIELFYQMELE 241
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 66/110 (60%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
FC M ++ + V+ A S+ A E+G+ +HA ++K G D V +A++DMYSK
Sbjct: 437 FCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVIDMYSK 496
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G++ ++ + F + K+VV+WN++++ + ++G KEA +FQ MT +
Sbjct: 497 CGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGI 546
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ F E+S +L S N+ + Y+ + ++ + S + ++TF + +CS
Sbjct: 301 VERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSV 360
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
G QVH +K G DS+ V ++++ YSK G ++EAF+ I + V W +
Sbjct: 361 SSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGI 420
Query: 149 LSSFLRHGLAKEAFGVFQAMTR 170
+S F ++G ++A F M +
Sbjct: 421 ISGFAQNGEGEKALMQFCKMRK 442
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD+I + D+ + N+ + Y ++ LF M TF VL A +A+
Sbjct: 204 FDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDS 263
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G+ HA ++K G + V TAL+DMYSK+ + + AF E+ +++V++NAL++ +
Sbjct: 264 AVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGY 323
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
G +EA V+ + E +E
Sbjct: 324 SLMGKYEEALRVYSQLQSEGME 345
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Query: 62 ALFCYMH--STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
AL C++ + A T++ + AC+ P +H L++K G ++ V + L+
Sbjct: 25 ALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATSLHCLILKKGFSNQLFVSSGLIS 84
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
MYSK+ + E+ F ++ +D V+WN++++ + + GL +EA G+F +M
Sbjct: 85 MYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGLNEEACGLFCSM 133
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF + ++ S NS + Y ++ LF M S+ + TA TF +L ACS
Sbjct: 504 QKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHA 563
Query: 90 PAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNA 147
E G+ + LM+ G T ++D+ + G L E+ F K+ W +
Sbjct: 564 GLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGS 623
Query: 148 LLSSFLRH 155
LLS+ H
Sbjct: 624 LLSACGVH 631
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR +F + + L S N+ + Y ++ FC M S + ++T V+
Sbjct: 281 KRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVI 340
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
A + L P + K +H L+I+ D V TAL+DMY+K G + + + F + + V+
Sbjct: 341 PALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVI 400
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TWNA++ + HGL K + +F+ M + ++
Sbjct: 401 TWNAMIDGYGTHGLGKTSVELFKEMKKGTIK 431
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + H + S NS + Y +S + +F M + T T L AC+ L
Sbjct: 188 IFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGD 247
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
ERGK VH L+ + DS+ V +L+ MYSK + + + FK + K +V+WNA++
Sbjct: 248 LERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILG 307
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ ++G EA F M ++
Sbjct: 308 YAQNGCVNEALNAFCEMQSRNIK 330
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 9/168 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C I DA + +FD + DL N+ + Y ++ L
Sbjct: 71 VVNMYAK-CRQINDA--------YNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLR 121
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T +L A + G VH +++ G +S V TAL+DMYSK G
Sbjct: 122 MSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGS 181
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F ++ + VV+WN+++ +++ G A+ A +FQ M E V+
Sbjct: 182 VSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQ 229
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
L Y +S + + + F M + Y FT +L C +RGK++H +I G
Sbjct: 2 LKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGF 61
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
T +++MY+K + ++ F + +D+V WN ++S + ++G AK A +
Sbjct: 62 SWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVLR 121
Query: 168 MTRE 171
M+ E
Sbjct: 122 MSEE 125
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I + ++L YV ++ FDE+S D+ S + + M +
Sbjct: 452 ICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQMAAGCLQCGEPMKALEVIYEMKN 511
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ L +T L +C+ L + E GK+ H L IK GTD + V AL+DMY+K G +
Sbjct: 512 VGVRLNKFTLATALNSCANLASIEEGKKFHGLRIKLGTDVDVCVDNALLDMYAKCGCMTS 571
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ ++ + VV+W ++ F +G KEA +F M + E
Sbjct: 572 ANVVFRSMDERSVVSWTTMIMGFAHNGQTKEALQIFDEMRKGEAE 616
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 5/140 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNF--PATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VF+ D S N+ + Y + F P W M+ + +TF +L +A
Sbjct: 373 EVFESCLSKDTVSWNAMMAGYLQLAYFELPKFWR---RMNLESVKPDNFTFASILTGLAA 429
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L G QVH ++K G ++ V +L DMY K L + +AF E+ DV +W +
Sbjct: 430 LSEFRLGLQVHGQLVKSGYGNDICVGNSLCDMYVKNQKLLDGFKAFDEMSSSDVCSWTQM 489
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ L+ G +A V M
Sbjct: 490 AAGCLQCGEPMKALEVIYEM 509
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVL 83
R Y Q+FDE+ ++ S ++ + + + +LF MH + +T L
Sbjct: 265 RLSYGLQLFDEMPERNVVSWSAIIAGFVQHGRPNEALSLFGRMHCDGTIMPNEFTLVSAL 324
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS Q++A +++ G S + A + ++ L E++E F+ KD V
Sbjct: 325 HACSLTQRLICSYQIYAFIVRLGYGSNVFLMNAFLTALIRHEKLLEALEVFESCLSKDTV 384
Query: 144 TWNALLSSFLR 154
+WNA+++ +L+
Sbjct: 385 SWNAMMAGYLQ 395
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 43/90 (47%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ L C G +HA +KG +++ Y K G L ++ F E+
Sbjct: 218 YVSFLQRCVLTSDSRHGSAIHAKFLKGFLPFSLFFHNHVLNFYVKCGRLSYGLQLFDEMP 277
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++VV+W+A+++ F++HG EA +F M
Sbjct: 278 ERNVVSWSAIIAGFVQHGRPNEALSLFGRM 307
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + + S S + Y R + LF M ++ +T T +L AC+
Sbjct: 307 QVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTG 366
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK VH + + S+ V ALMDMY+K G +G++ F E++ KD+V+WN ++
Sbjct: 367 LLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIG 426
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++ L EA +F M
Sbjct: 427 GYSKNSLPNEALNLFVEM 444
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA H VF E+ D+ S N+ + Y+++ LF M
Sbjct: 400 CGSMGDA--------HSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KP 450
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T +L AC++L A ERG+++H +++ G + V AL+DMY K G LG + F
Sbjct: 451 NSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLF 510
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I KD+V+W +++ + HG EA F M +E
Sbjct: 511 DMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++FDE+ D+ S NS + Y + LF M +N T V+
Sbjct: 199 RRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVV 258
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
CS G+ +H IK E + L+DMYSK G L +++ F+ + + VV
Sbjct: 259 AGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVV 318
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+W ++++ + R GL+ + +F M +E +
Sbjct: 319 SWTSMIAGYAREGLSDMSVRLFHEMEKEGI 348
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/145 (19%), Positives = 61/145 (42%), Gaps = 49/145 (33%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL--------------- 117
+L T+ VL C+ L + + G+++H+++ + + V+ + L
Sbjct: 98 DLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRR 157
Query: 118 ----------------MDMYSKYGLLGESVEAFK------------------EIEFKDVV 143
M+ Y+K G ES+ FK E+ +DV+
Sbjct: 158 IFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFDELGDRDVI 217
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+WN+++S ++ +GL+++ +F+ M
Sbjct: 218 SWNSMISGYVSNGLSEKGLDLFEQM 242
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++FD + + S ++ L Y ++ +F + +F M L Y F +L C+
Sbjct: 317 SQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAG 372
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A +GK+VH I+ G + +V++AL+D+Y+K G + + F ++ ++++TWN++
Sbjct: 373 LAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSM 432
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F ++G +EA +F M +E ++
Sbjct: 433 IGGFAQNGRGEEALRIFNQMVKEGIK 458
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM---HSTCLNLTAYTFTPVLGAC 86
Q+FDE+ D S + + TR+ F F M H C + +TF VL AC
Sbjct: 216 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD--GFTFGTVLTAC 273
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
L ++GK+VHA +I G VV+++L+DMY K G +GES F + K+ V+W+
Sbjct: 274 GNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWS 333
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
ALL + ++G K +F+ M +
Sbjct: 334 ALLGGYCQNGDFKSVIQIFRKMEK 357
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
S + F + +++ L + T +VFD + D+ S S + Y R +
Sbjct: 88 SGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLE 147
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + A+T + V+ ACS L + G+ H +++ G DS V+ +AL+DM+
Sbjct: 148 LFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHG 207
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ L ++ + F E+ D + W +++S+ R+ EA F +M R+
Sbjct: 208 RNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRD 256
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL-LGESVEAFKEI 137
+ +L C+ + A G Q+HA +IK G + + V +L+ +Y K G E+ + F +
Sbjct: 62 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 121
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDV++W +++S ++R G + +F M VE
Sbjct: 122 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVE 158
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++FD + + S ++ L Y ++ +F + +F M L Y F +L C+
Sbjct: 376 SQRIFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAG 431
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A +GK+VH I+ G + +V++AL+D+Y+K G + + F ++ ++++TWN++
Sbjct: 432 LAAVRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSM 491
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F ++G +EA +F M +E ++
Sbjct: 492 IGGFAQNGRGEEALRIFNQMVKEGIK 517
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 75/144 (52%), Gaps = 5/144 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM---HSTCLNLTAYTFTPVLGAC 86
Q+FDE+ D S + + TR+ F F M H C + +TF VL AC
Sbjct: 275 RQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGMCPD--GFTFGTVLTAC 332
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
L ++GK+VHA +I G VV+++L+DMY K G +GES F + K+ V+W+
Sbjct: 333 GNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWS 392
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
ALL + ++G K +F+ M +
Sbjct: 393 ALLGGYCQNGDFKSVIQIFRKMEK 416
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 82/169 (48%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
S + F + +++ L + T +VFD + D+ S S + Y R +
Sbjct: 147 SGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLE 206
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + A+T + V+ ACS L + G+ H +++ G DS V+ +AL+DM+
Sbjct: 207 LFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIASALIDMHG 266
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ L ++ + F E+ D + W +++S+ R+ EA F +M R+
Sbjct: 267 RNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRD 315
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL-LGESVEAFKEI 137
+ +L C+ + A G Q+HA +IK G + + V +L+ +Y K G E+ + F +
Sbjct: 121 YASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGL 180
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDV++W +++S ++R G + +F M VE
Sbjct: 181 FVKDVISWTSMISGYVRVGKPMNSLELFWKMLAYGVE 217
>gi|15236431|ref|NP_192561.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208454|sp|Q9SUF9.1|PP305_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g08210
gi|5262194|emb|CAB45791.1| putative protein [Arabidopsis thaliana]
gi|7267461|emb|CAB81157.1| putative protein [Arabidopsis thaliana]
gi|332657209|gb|AEE82609.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 686
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++F + + D+ + + + +S + LF + L+ + + +L CS+L
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSL 456
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQ+H L IK G +SEPV TAL+DMY K G + V F + +DVV+W ++
Sbjct: 457 ASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGII 516
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F ++G +EAF F M +E
Sbjct: 517 VGFGQNGRVEEAFRYFHKMINIGIE 541
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSA 88
H+VFDE+S ++ + + + YT L+ M S + ++ VL AC
Sbjct: 60 HKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL 119
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + G V+ + K + V+ +++DMY K G L E+ +FKEI +WN L
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTL 179
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+S + + GL EA +F M + V
Sbjct: 180 ISGYCKAGLMDEAVTLFHRMPQPNV 204
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
L S + P M L L + L ACS GKQ+H ++K G
Sbjct: 210 LISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGL 269
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEF---KDVVTWNALLSSFL 153
+S P +AL+DMYS G L + + F + + V WN++LS FL
Sbjct: 270 ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 45 NSQLFSY-TRSRNFPATWALF-CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
NS L + N A W L Y C + +YT + L C G QVH+L+
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFD--SYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
+ G + + +V + L+D+++ G + ++ + F + KD++ ++ L+ ++ G AF
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAF 428
Query: 163 GVFQAMTR 170
+F+ + +
Sbjct: 429 YLFRELIK 436
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + A +RG+ + A +IK G + ++ MY + LL ++ + F E+ +++VTW
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S + G +A +++ M E
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
>gi|53370717|gb|AAU89212.1| PPR repeat containing protein [Oryza sativa Japonica Group]
gi|108709006|gb|ABF96801.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 623
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F ++ D + N+ + Y RS LF + T +TF VL S
Sbjct: 295 LFKGMATWDSETCNAMISGYARSGLMEQALGLFTMALQNGILPTGFTFASVLRWSSCFGL 354
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G Q+HAL+ K G + + ++ TAL+DMY K L + + F + FKD+V WN ++
Sbjct: 355 VEQGTQIHALIFKLGLEDDLIIATALVDMYCKLASLKHAKKIFSRVSFKDLVLWNTMIIG 414
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+G KEA VF+ M + ++
Sbjct: 415 LSHNGRGKEALQVFRQMLKCNIQ 437
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D + NS + Y +L M + + +TF+ +L SA+
Sbjct: 94 RLFDEMPDRDAVAYNSMMSGYIDGGRNNEALSLVWTMLEAGVRPSGFTFSIIL---SAVR 150
Query: 91 APERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G QVHA ++ VV AL++MY + GLL +V+ F + D+V+WN+++
Sbjct: 151 VARHGVQVHAAAVRHCFAHQNSVVGNALINMYRRVGLLEYAVQVFWSMNGHDIVSWNSVM 210
Query: 150 SSFLRHGLAKEAFGVFQ 166
S + G ++ F F+
Sbjct: 211 SVYRDDGQRRQVFECFR 227
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 62/138 (44%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y QVF ++ D+ S NS + Y + F + S L + + VL AC
Sbjct: 190 YAVQVFWSMNGHDIVSWNSVMSVYRDDGQRRQVFECFRMIRSHGLFFDECSLSTVLSACI 249
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+G Q+ +K G ++ +A++ + L ++V FK + D T NA
Sbjct: 250 DAEDSSKGDQLLTHCVKMGLLRNSLICSAVIGLLCASDRLADAVYLFKGMATWDSETCNA 309
Query: 148 LLSSFLRHGLAKEAFGVF 165
++S + R GL ++A G+F
Sbjct: 310 MISGYARSGLMEQALGLF 327
>gi|383152423|gb|AFG58307.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L ++TF +L AC++L A ++GK +H +I+ G S V+ +L+DMY+K G L ++ +
Sbjct: 5 LDSHTFASILPACASLAALDQGKGIHEDIIRSGLQSYVTVENSLLDMYAKCGSLEDARKV 64
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + +DVV+WNA++ + HG KEA +F+ M
Sbjct: 65 FNRMTTRDVVSWNAMIVGYAIHGCGKEALQLFEQM 99
>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 771
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 2/144 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFDE+ H +L S NS + + +++ + +F + S L + + VL AC+ L
Sbjct: 256 NVFDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFREVLS--LGPDQVSISSVLSACAGLV 313
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQVH ++K G VK +L+DMY K GL ++ + F +DVVTWN ++
Sbjct: 314 ELDFGKQVHGSIVKRGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIM 373
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
R ++A FQAM RE VE
Sbjct: 374 GCFRCRNFEQACTYFQAMIREGVE 397
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 65/105 (61%), Gaps = 4/105 (3%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M +T + +TF+ +L AC+ G+Q+HAL+ K ++P V TAL+DMY+K
Sbjct: 188 FNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAK 247
Query: 124 YG--LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
G LL E+V F E+ +++V+WN+++ F+++ L A GVF+
Sbjct: 248 CGSMLLAENV--FDEMPHRNLVSWNSMIVGFVKNKLYGRAIGVFR 290
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 68/134 (50%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ + N + R RNF F M + +++ + A +++ A +G +H
Sbjct: 364 DVVTWNVMIMGCFRCRNFEQACTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIH 423
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ ++K G + ++L+ MY K G + ++ + F+E + +VV W A+++ F +HG A
Sbjct: 424 SHVLKTGHVKNSRISSSLVTMYGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCAN 483
Query: 160 EAFGVFQAMTRERV 173
EA +F+ M E V
Sbjct: 484 EAIKLFEEMLNEGV 497
>gi|224132434|ref|XP_002328268.1| predicted protein [Populus trichocarpa]
gi|222837783|gb|EEE76148.1| predicted protein [Populus trichocarpa]
Length = 749
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+EIS + S NS L + + N+ +L M + T +L C
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
P K +H +MI+ G+++ +V +AL+D Y+K L+ + E F + +DVV+W+ ++S
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F G EA V+Q M R+ V+
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVK 449
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 17 SIADALPKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
++ DA K Y+ +VF + D+ S ++ + + A++ M +
Sbjct: 391 ALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKP 450
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T +L ACS +R K H + I+ G SE V TA++DMYSK G + S AF
Sbjct: 451 NVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAF 510
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ K++VTW+A+++++ +GLA EA +F M R
Sbjct: 511 DQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKR 546
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 17 SIADALPKRYV-----YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST- 70
S+ ++L YV ++FDE+ D+ + + + Y + +F M
Sbjct: 185 SVQNSLLSMYVDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVP 244
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
+ VL AC++ G+ VH L+I G D + V+ +L+DMYSK G +
Sbjct: 245 GIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA 304
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F EI ++ V+WN++LS F+ + EA + +M +ERVE
Sbjct: 305 FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVE 348
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
F P+L A S L + GK +HA +IK G DS + ++M Y + G +V+ F +
Sbjct: 50 VFPPILKAWSFL-SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSM 108
Query: 138 -EFKDVVTWNALLSSFLRHG 156
+D V+WN L+ L +G
Sbjct: 109 RRSRDSVSWNILIHGHLDNG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T V+ AC L G +H +IK G + V+ +L+ MY + + E F E+
Sbjct: 151 TMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDADMEC-ARELFDEM 209
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
KDV+ W+ ++ +L+ + +F+ M
Sbjct: 210 HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMV 241
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D+ S N + ++ + LF M + A F +L AC++ A
Sbjct: 287 VFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGA 346
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E K++H + G + + V TAL+ MYSK G + ++ F ++ ++VV+WNA++S
Sbjct: 347 LEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISG 406
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+HGL ++A VF+ MT V+
Sbjct: 407 LAQHGLGQDALEVFRRMTAHGVK 429
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + + D+ S + +Y +S N + L M A T+ +L AC++
Sbjct: 185 RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + K+VH + G + + V TAL+ MY+K G + ++ F ++ +DVV+WN ++
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+F HG EA+ +F M E
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTE 325
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + +S N+ + Y ++ LF M + A T+ +L AC++L A
Sbjct: 85 VFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSA 144
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK+VHA + GG +S+ V TAL+ MY K G + E+ F + D+++W ++ +
Sbjct: 145 LKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGA 204
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ + G KEA+ + M +E
Sbjct: 205 YAQSGNGKEAYRLMLQMEQE 224
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
++ + VL C KQVH +IK + V L+ +Y + G L E+ F
Sbjct: 28 SFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFD 87
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ K +WNA+++ ++ H A++A +F+ M E V+
Sbjct: 88 ALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQ 126
>gi|118488304|gb|ABK95971.1| unknown [Populus trichocarpa]
Length = 749
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+EIS + S NS L + + N+ +L M + T +L C
Sbjct: 306 KVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVETDEVTLVNILQICKYFV 365
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
P K +H +MI+ G+++ +V +AL+D Y+K L+ + E F + +DVV+W+ ++S
Sbjct: 366 HPFHCKSIHCVMIRRGSEANELVLSALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMIS 425
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F G EA V+Q M R+ V+
Sbjct: 426 GFAHCGKPDEAIAVYQEMDRDLVK 449
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 2/156 (1%)
Query: 17 SIADALPKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
++ DA K Y+ +VF + D+ S ++ + + A++ M +
Sbjct: 391 ALIDAYAKCYLIEIAWEVFARMRRRDVVSWSTMISGFAHCGKPDEAIAVYQEMDRDLVKP 450
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T +L ACS +R K H + I+ G SE V TA++DMYSK G + S AF
Sbjct: 451 NVITIINLLEACSVTAELKRSKWAHGVAIRQGFASEVTVGTAVVDMYSKCGEILASRRAF 510
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ K++VTW+A+++++ +GLA EA +F M R
Sbjct: 511 DQLALKNIVTWSAMIAAYGMNGLAHEALALFAEMKR 546
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 17 SIADALPKRYV-----YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST- 70
S+ ++L YV ++FDE+ D+ + + + Y + +F M
Sbjct: 185 SVQNSLLSMYVDADMECARELFDEMHEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMVLVP 244
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
+ VL AC++ G+ VH L+I G D + V+ +L+DMYSK G +
Sbjct: 245 GIEPDGVVMVSVLKACASSRDVCTGRLVHGLVIHRGFDCDLFVENSLIDMYSKCKDAGSA 304
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F EI ++ V+WN++LS F+ + EA + +M +ERVE
Sbjct: 305 FKVFNEISQRNNVSWNSMLSGFVLNENYSEAQSLISSMRKERVE 348
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
F P+L A S L + GK +HA +IK G DS + ++M Y + G +V+ F +
Sbjct: 50 VFPPILKAWSFL-SHRHGKSLHACLIKQGFDSFTSIGNSIMGFYIRCGDFDIAVDVFNSM 108
Query: 138 -EFKDVVTWNALLSSFLRHG 156
+D V+WN L+ L +G
Sbjct: 109 RRSRDSVSWNILIHGHLDNG 128
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T V+ AC L G +H +IK G + V+ +L+ MY + + E F E+
Sbjct: 151 TMVLVIQACRILGTKHDGLILHGYLIKSGFWAISSVQNSLLSMYVDADMEC-ARELFDEM 209
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
KDV+ W+ ++ +L+ + +F+ M
Sbjct: 210 HEKDVIAWSVMIGGYLQWEEPQVGLQMFRKMV 241
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+FD ++ N L +Y + + ++ +F M + + +T+ +L C+
Sbjct: 300 QIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTG 359
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H+L IK G S+ V L+DMYSKYG L ++ IE KDVV+W ++++
Sbjct: 360 EIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIA 419
Query: 151 SFLRHGLAKEAFGVFQAM 168
+++H KEA F+ M
Sbjct: 420 GYVQHEFCKEALETFKEM 437
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 69/147 (46%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ D I D+ S S + Y + F M + + + AC+
Sbjct: 399 AQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAG 458
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A +G Q+HA + G ++ + L+ +Y++ G+ E+ +F+ IE K+ +TWN L
Sbjct: 459 IKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGL 518
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
+S F + GL +EA VF M + ++
Sbjct: 519 ISGFAQSGLYEEALKVFMKMDQAGAKY 545
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 69/139 (49%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ I H + + N + + +S + +F M +TF + A + L
Sbjct: 504 FEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADI 563
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
++GKQ+HA +IK G SE + AL+ +Y K G + ++ F E+ ++ V+WN +++
Sbjct: 564 KQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCC 623
Query: 153 LRHGLAKEAFGVFQAMTRE 171
+HG EA +F M ++
Sbjct: 624 SQHGRGLEALDLFDQMKQQ 642
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 75/138 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ + D + N+ + + + + +F M + L+ + T +L ACSA+
Sbjct: 199 RVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVG 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GKQ+H+ ++K G + +++ +L+D+Y K G + E+++ F + +VV WN +L
Sbjct: 259 DLRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLV 318
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ + ++F +F M
Sbjct: 319 AYGQIDDLAKSFDIFYRM 336
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+S D S + L Y ++ L+ MH + + T Y + +L AC+
Sbjct: 98 RVFEELSVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTE 157
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+ +H + K G SE V AL+ +Y + + F ++ + D VT+N L+S
Sbjct: 158 LFQLGRLIHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLIS 217
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G A G+F M
Sbjct: 218 GHAQCGHGDRALGIFDEM 235
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 45/77 (58%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
++HA I G ++ L+D+Y+K G + + F+E+ +D V+W A+LS + ++G
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 157 LAKEAFGVFQAMTRERV 173
L +EA +++ M R V
Sbjct: 123 LGEEAVRLYREMHRSGV 139
>gi|297796453|ref|XP_002866111.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311946|gb|EFH42370.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 829
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ C+ +A +L Y +VFDEI ++ + N+ + Y ++ LF
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFSD 264
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T T + L A + + E GKQ HA+ I G + + ++ T+L++ Y K GL
Sbjct: 265 MRKEGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGLELDNILGTSLLNFYCKVGL 324
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + F + KDVVTWN ++S +++ GL + A + Q M E++++
Sbjct: 325 IEYAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKY 373
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH ++K G + V ++L DMY K G+L ++ + F EI ++
Sbjct: 179 VCKACGALQWSRFGRGVHGYVVKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERN 238
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VV WNAL+ ++++G+ +EA +F M +E VE
Sbjct: 239 VVAWNALMVGYVQNGMNEEAIRLFSDMRKEGVE 271
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T ++ A +
Sbjct: 327 YAEMVFDRMIDKDVVTWNLIISGYVQQGLVENAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ V+ + +MDMY+K G + ++ + F KD++ WN
Sbjct: 387 RTQNLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTAEKDLILWNT 446
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ E +F M E V
Sbjct: 447 LLAAYAESGLSGEGLRLFYGMQLEGV 472
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L A + T L AC+ L + G+ +H +I+ S V ++T+L+DMY+K G
Sbjct: 537 MQESGLRPNAVSITVALSACANLASLHFGRSIHGYIIRNLQHSSSVSIETSLVDMYAKCG 596
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ + F + ++ +NA++S++ +G KEA +++++
Sbjct: 597 DINKAEKVFGSKLYSELPLYNAMISAYALYGNLKEAIALYRSL 639
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 95 GKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GKQ+HA ++K G ++T L+ Y+K L + F ++ ++V +W A++
Sbjct: 89 GKQIHARILKNGDFYAKNEYIETKLVIFYAKCDALDIAEVLFTKLRVRNVFSWAAIIGVK 148
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
R GL + A F M +
Sbjct: 149 CRIGLCEGALMGFVEMLENEI 169
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + + + +S Y ++ + ALF T L + + V+ AC+ L A
Sbjct: 222 VFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAA 281
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GKQV+AL+ K G S V ++L+DMY+K G + ES + F+++E ++VV WNA++S
Sbjct: 282 MIEGKQVNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISG 341
Query: 152 FLRHGLAKEAFGVFQAMTR 170
RH + E +F+ M +
Sbjct: 342 LSRHARSLEVMILFEKMQQ 360
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ QVFDE+ L S N+ + S T++ L M + +T + VL AC+
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A A + +HA IK D V TAL+D+Y+K GL+ ++V F+ + + VVTW++
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSS 236
Query: 148 LLSSFLRHGLAKEAFGVFQ 166
+ + ++++ + ++A +F+
Sbjct: 237 MAAGYVQNEMYEQALALFR 255
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 73 NLTAYTFT-PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
N T +F +L C+ +GK HA ++ G ++ + L++MYSK G + +
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F E+ + +V+WN ++ S ++G EA + M RE F
Sbjct: 120 QVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPF 163
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+++VF ++ ++ N+ + +R LF M L+ TF VL AC
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVT-WN 146
+ ++G++ LM K + V + ++D S+ G + E+ + ++ F + W
Sbjct: 380 MGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439
Query: 147 ALLSSFLRHG 156
+LL+S HG
Sbjct: 440 SLLASCRTHG 449
>gi|359497691|ref|XP_003635608.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
mitochondrial-like, partial [Vitis vinifera]
Length = 317
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL ACS+L + + G++ H L++K G +S + AL+ MY K G + +S AF++I
Sbjct: 28 TLVSVLTACSSLASLQEGRKTHVLVLKSGYESHISICNALITMYCKCGSILDSELAFRQI 87
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ DVV+WNA++++F RHG A F M RVE
Sbjct: 88 DHPDVVSWNAMIAAFARHGFYDRALASFGEMRSNRVE 124
>gi|302798571|ref|XP_002981045.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
gi|300151099|gb|EFJ17746.1| hypothetical protein SELMODRAFT_334 [Selaginella moellendorffii]
Length = 833
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F++ SH +L+S NS + +Y + L M + TF +L AC A
Sbjct: 571 HLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGVLPDRVTFITLLNACVAGG 630
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK +HA +I G + + VV AL++ YSK G L + F ++++DVV+WN +++
Sbjct: 631 AVRHGKMIHARIIDSGLEKDTVVANALVNFYSKCGNLDTATSLFGALDYRDVVSWNGIIA 690
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
F +G A+EA M ++ V
Sbjct: 691 GFAHNGHAREALKSMWLMQQDGV 713
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 79/144 (54%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL-NLTAYTFTPVLGACSAL 89
++F + ++ S N+ + S T + +F LF M + + T +F VL A +
Sbjct: 257 EIFHRMPERNVVSWNAMVASCTLNAHFAEAIELFKRMVAVAMVEPTRVSFITVLNAVTTP 316
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G+++HA++ + S+ V AL+ MY + G +G++ F +E +D+V+WNA++
Sbjct: 317 EALAEGRRIHAMIQERQLLSQIEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMI 376
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S++ + GLA+E +F M ERV
Sbjct: 377 SAYAQSGLAREVVNLFHRMRAERV 400
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF E+ DL S N+ + + S ++ T AL M + TF L AC +
Sbjct: 157 VFSEMRERDLISWNNAIAANAESGDYTFTLALLKSMQLEGMAPDKVTFVSALNACIGSRS 216
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+ +HAL+++ G + + V+ TAL+ MY + G L + E F + ++VV+WNA+++S
Sbjct: 217 LSNGRLIHALVLERGMEGDVVLGTALVTMYGRCGCLESAREIFHRMPERNVVSWNAMVAS 276
Query: 152 FLRHGLAKEAFGVFQAMT 169
+ EA +F+ M
Sbjct: 277 CTLNAHFAEAIELFKRMV 294
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 14 TCISIADALPKRYVYTHQ--------------VFDEISHGDLSSLNSQLFSYTRSRNFPA 59
+CIS+A+A Y +F+ ++ D+ S N+ + Y ++ + +
Sbjct: 437 SCISVANATMHLYSSCSSSSSSSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFS 496
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTD--SEPVVKTAL 117
++F M + TF +L C + +G+ +H +I + S+P+V A+
Sbjct: 497 ALSIFKRMLLEGIRGNQVTFMSLLSVCDSRAFLRQGETIHRRVINQTPELSSDPIVAAAI 556
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++MY K G L + F++ +++ +WN+++S++ HG A++AF + + M RE V
Sbjct: 557 VNMYGKCGELDTARHLFEDTSHRNLASWNSMISAYALHGRAEQAFDLSERMRREGV 612
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + + +Y ++ + LF M + L+ TF +L AC +
Sbjct: 54 KVFDRMRERDVVSWTAMISAYAQTGHQRQALDLFTEMAGSSLDPNRVTFLALLEACDSPE 113
Query: 91 APERGKQVHALMIK-GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E GKQ+HA + +S+ V A+M MY K ++ F E+ +D+++WN +
Sbjct: 114 FLEDGKQIHARVSALQLLESDVPVANAVMGMYRKCERADLAMAVFSEMRERDLISWNNAI 173
Query: 150 SSFLRHG 156
++ G
Sbjct: 174 AANAESG 180
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 14/172 (8%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +A+AL Y +VF + DL S N+ + +Y +S LF M +
Sbjct: 338 IEVANALVTMYGRCGGVGDAERVFSAMERRDLVSWNAMISAYAQSGLAREVVNLFHRMRA 397
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY-------S 122
+ TF L AC+ + + G+ VH L ++ G S V A M +Y S
Sbjct: 398 ERVPPDRITFLMALDACAEIRDLDSGRTVHHLSVESGFGSCISVANATMHLYSSCSSSSS 457
Query: 123 KYGLLGESVEA-FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
L E V F+ + +DV++WN +++ +++ G + A +F+ M E +
Sbjct: 458 SSSSLMEVVAGIFESMAARDVISWNTMITGYVQAGDSFSALSIFKRMLLEGI 509
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ ++ AC A E+G++VH + + D L++MY + L E+ + F +
Sbjct: 1 YARLMRACGISGALEQGRRVHGHVQRHADDRSLFFGNRLVNMYRRCSSLDEARKVFDRMR 60
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DVV+W A++S++ + G ++A +F M
Sbjct: 61 ERDVVSWTAMISAYAQTGHQRQALDLFTEM 90
>gi|242037817|ref|XP_002466303.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
gi|241920157|gb|EER93301.1| hypothetical protein SORBIDRAFT_01g005310 [Sorghum bicolor]
Length = 606
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F G + S N+ + + RS LF M L T+ T VL AC+ L A
Sbjct: 190 MFGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREMQGKGLKPTSVTVISVLSACALLGA 249
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ VH + K G S V TAL+DMY+K G L ++++ F+ +E KD W+ ++ +
Sbjct: 250 LELGRWVHDYVRKIGLGSLVKVSTALIDMYAKCGSLEDAIDVFQGMESKDRQAWSVMIVA 309
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ HG +EA +F+ M +E
Sbjct: 310 YANHGYGREAISLFEEMKKE 329
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 20 DALPKRYVYTHQVFDEISH-GDLSSLNSQLFSYTRSRNFPATWA-----LFCYMHSTCLN 73
DA P Y QVFD + H D N+ L Y RS N ++ A +F M +
Sbjct: 71 DAGPAHLAYARQVFDRVPHPADAVWYNTLLRGYARSSNPSSSEAAAAVRVFVRMLEEGVA 130
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
YTF +L AC+A A E G+Q HAL +K G V+ L++MY++ G +
Sbjct: 131 PDTYTFVSLLKACAAARAGEEGRQAHALAVKLGAADHDYVRPTLINMYAECGDARAARVM 190
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + VV++NA++++ +R EA +F+ M
Sbjct: 191 FGGTDGGCVVSYNAMIAAAVRSSRPGEALVLFREM 225
>gi|297829948|ref|XP_002882856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328696|gb|EFH59115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 753
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D S NS + Y R L MH L LT Y VL AC
Sbjct: 206 LFDRCNERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRAGLKLTTYALGSVLKACCINLN 265
Query: 92 P---ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E+G +H K G + + VV+TAL+DMY+K G L E+++ F + K+VVT+NA+
Sbjct: 266 EGLMEKGMAIHCYAAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPAKNVVTYNAM 325
Query: 149 LSSFLRHG-----LAKEAFGVFQAMTRERVE 174
+S FL+ + EAF +F M R +E
Sbjct: 326 ISGFLQMDDITDEASSEAFKLFMEMQRRGLE 356
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ Q+FD + ++ S NS + YT+ + LF L L +T+ LG C
Sbjct: 101 FARQLFDRMPERNIISFNSLISGYTQVGFYEQAMELFLEARDDNLKLDKFTYAGALGFCG 160
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK +H L++ G + + L+DMYSK G L +++ F +D V+WN+
Sbjct: 161 ERCDLDFGKLLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCNERDQVSWNS 220
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
L+S ++R G A+E + M R
Sbjct: 221 LISGYVRVGAAEEPLNLLAKMHR 243
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 76/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F S D++S S + + ++ + + LF + S+ + YT + ++ AC+
Sbjct: 415 QCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQLFSSPIRPEEYTVSLMMSACADFA 474
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+Q+ IK G D+ VKT+ + MY+K G + + + F E++ DV T++A++S
Sbjct: 475 ALSSGEQIQGYAIKSGIDAYTSVKTSSISMYAKSGNMPLANKVFIEVQNPDVATYSAMIS 534
Query: 151 SFLRHGLAKEAFGVFQAM 168
S +HG A +A +F++M
Sbjct: 535 SLAQHGSAHDALNIFESM 552
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%)
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
+ LF M L + TF+ VL ACSA E G+Q+HAL+ K S+ + +AL+++
Sbjct: 344 FKLFMEMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 403
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y+ G + ++ F +D+ +W +++ +++ + AF +F+ +
Sbjct: 404 YALMGSTEDGMQCFASTSKQDIASWTSIIDCHVQNEQLESAFDLFRQL 451
>gi|413935435|gb|AFW69986.1| hypothetical protein ZEAMMB73_442164 [Zea mays]
Length = 658
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 62/95 (65%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T++ V+ C++L A G+ VH IK G + + +V ++L+ MYSK GL+ E+ + F I
Sbjct: 380 TWSVVISVCASLAALGCGRMVHICTIKTGFEHDALVMSSLISMYSKCGLITEASQVFDLI 439
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+D VTWNA+++++ HGLA EA +F MT++R
Sbjct: 440 VQRDTVTWNAMIATYAYHGLAAEALALFDRMTKDR 474
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 39 GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG--ACSALPAPERGK 96
GD+ NS + ++ R+ A +F M +T+ ++ A + L A RG
Sbjct: 34 GDVGRWNSDIMAHFRAGRVGAARRVFDEMRER----NVFTWNCMVSGLARNGLLADARG- 88
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
+ V AL+ Y++ G + E+ + F + ++VV+WNA++S +LR+G
Sbjct: 89 -----VFDAMPSRNSVSWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNG 143
Query: 157 LAKEAFGVFQAM-TRERVEF 175
+ A +F AM R+ V +
Sbjct: 144 MVDRARELFDAMPARDDVSW 163
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 12/164 (7%)
Query: 10 FPAKTCISIADALPK-----RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
P++ +S A L R +FD + H ++ S N+ + Y R+ LF
Sbjct: 93 MPSRNSVSWAALLTGYARRGRVAEARDLFDRMPHRNVVSWNAMVSGYLRNGMVDRARELF 152
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M A L S +R ++ + + + V AL+ Y+ Y
Sbjct: 153 DAM-------PARDDVSWLMMVSGYMRRKRFREAREIFDRAPSPPPTSVCNALLSGYAGY 205
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G L ++ E F ++ D V+WNA+++ + R G+ + A +F M
Sbjct: 206 GYLKDAEELFGRMQRPDRVSWNAMITGYTRAGMMQVARRLFDEM 249
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V A++ Y++ G++ + F E+ KD V+W A++ +L++G A+ VFQ M
Sbjct: 222 DRVSWNAMITGYTRAGMMQVARRLFDEMPGKDTVSWTAIVRGYLQNGDVDAAWEVFQDM 280
>gi|357118286|ref|XP_003560887.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 1/141 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + S N+ + Y ++ ++ LF M +TF+ VL AC++LP
Sbjct: 354 FDRMPERGTISWNTMISGYEQNGHYDGAIELFTKMLEAGGTPDRHTFSSVLAACASLPML 413
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G Q+H L+ K + ALM MYS+ G L ++ FK++ KD+V+WNAL+ +
Sbjct: 414 RLGAQLHQLIEKSFL-PDTATSNALMTMYSRGGALTDAEAIFKQMPQKDLVSWNALIGGY 472
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
HG A EA +F+ M RV
Sbjct: 473 EHHGCATEALQLFEDMRSARV 493
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 19/149 (12%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
DALP R V T NS L + R R+ A A F M A ++
Sbjct: 54 DALPARSVVT--------------WNSFLAALARGRDVAAARAFFASMPVR----DAVSW 95
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
+L A S E L + + V L+ Y + GL+ E+ + F E+
Sbjct: 96 NTLLAAYSRSLNSEHLAAARRLFDEM-PQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQ 154
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++V +WN +++ F G +A +F AM
Sbjct: 155 RNVASWNTMVTGFFSAGQVNKALDMFDAM 183
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 24/40 (60%)
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F E+ +D VTWN LL +++R GL EA +F M + V
Sbjct: 118 FDEMPQRDAVTWNTLLGAYVRRGLMVEAEKLFDEMPQRNV 157
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+S ++ + NS YT+S N+ LF M + T VL AC L
Sbjct: 180 RVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLA 239
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+ ++ + + G P + T+L+DMY+K G + + F +++ +DVV W+A++S
Sbjct: 240 DLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMIS 299
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + +EA +F M + ++
Sbjct: 300 GYSQASRCREALDLFHEMQKANID 323
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
S A LP Y +F +I D + N + +T ++ LF MH +
Sbjct: 65 SAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDE 124
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF +L CS L A G+Q+HAL++K G S VK L+ MY+ G + + F E
Sbjct: 125 FTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDE 184
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ ++V TWN++ + + + G +E +F M + F
Sbjct: 185 MSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRF 223
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 71/144 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ D+ + ++ + Y+++ LF M ++ T +L +C+ L
Sbjct: 281 RLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLG 340
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GK VH + K + TALMD Y+K G + S+E F ++ K+V++W L+
Sbjct: 341 ALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVESSIEVFGKMPVKNVLSWTVLIQ 400
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+G K+A F M + VE
Sbjct: 401 GLASNGQGKKALEYFYLMLEKNVE 424
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E + GDL S S + +Y + LF M L + + +L AC+ L
Sbjct: 516 RIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLS 575
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+H ++K G + +L++MY+K G + ++ AF E+ + +V+W+A++
Sbjct: 576 AFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIG 635
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+HG ++A +F M +E V
Sbjct: 636 GLAQHGHGRQALQLFNQMLKEGV 658
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 79/149 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
++ + ++FDEI ++ S N+ Y + LF M + + ++ + ++
Sbjct: 207 EFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVN 266
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ L RGK +H +IK G D +P AL+DMY+K G L +++ F++I+ D+V+
Sbjct: 267 ACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVS 326
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
WNA+++ + H ++A + M R +
Sbjct: 327 WNAVIAGCVLHEHHEQALELLGQMKRSGI 355
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+ + Y ++ DE S DL S ++ + Y ++ F MH + +TF+ VL
Sbjct: 105 RNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVL 164
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS + GKQVH +++ G + + V L+ MY+K +S F EI ++VV
Sbjct: 165 KACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVV 224
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMT 169
+WNAL S +++ EA G+F M
Sbjct: 225 SWNALFSCYVQIDFCGEAVGLFYEMV 250
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 74/144 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF++I D+ S N+ + + L M + + +T + L AC+ +
Sbjct: 315 VFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGL 374
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+Q+H+ ++K +S+ V L+DMYSK LL ++ AF + KD++ WNA++S
Sbjct: 375 KELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 434
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+ ++ EA +F M +E + F
Sbjct: 435 YSQYWEDMEALSLFVEMHKEGIGF 458
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 68/136 (50%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + DL + N+ + Y++ +LF MH + T + +L + + L
Sbjct: 417 FNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVV 476
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+QVH L +K G S+ V +L+D Y K + ++ F+E D+V++ ++++++
Sbjct: 477 HVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAY 536
Query: 153 LRHGLAKEAFGVFQAM 168
++G +EA +F M
Sbjct: 537 AQYGQGEEALKLFLEM 552
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%)
Query: 58 PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL 117
P T A+ + T+ +++ +L C + G Q+HA + K G +P ++ L
Sbjct: 38 PQTTAILNLIDKGNFTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHL 97
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++YSK G + + E D+V+W+AL+S + ++GL A F M
Sbjct: 98 INLYSKCRNFGYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEM 148
>gi|225438217|ref|XP_002263704.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49740-like [Vitis vinifera]
Length = 729
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+QVF+ +S +L S N+ + + + F + + L AYT + VL C+++
Sbjct: 437 YQVFNNMSSPNLISWNTIISGFLFNGFTLQGLEQFYELLMSTLKPNAYTLSIVLSICASI 496
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A GKQ+H +++ G S + AL+ MY+K G L S+ F + +D+V+WNA++
Sbjct: 497 SALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIFNVMNGRDIVSWNAMI 556
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S++ +HG KEA F+AM
Sbjct: 557 SAYAQHGKGKEAVHFFKAM 575
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
H VFD + DL S N + +Y + + F M + +T +L + +
Sbjct: 338 VHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIEPDEFTIGSLLASSES 397
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L E K AL+ K G +S+ V AL+ +SK+G + ++ + F + ++++WN +
Sbjct: 398 L---EIVKMFQALVSKNGLNSKIEVSNALVSAFSKHGQIEQAYQVFNNMSSPNLISWNTI 454
Query: 149 LSSFLRHGLAKEAFGVF 165
+S FL +G + F
Sbjct: 455 ISGFLFNGFTLQGLEQF 471
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F M CL T TF V+ +CS+ QVHA IK G ++ V A M MYS
Sbjct: 274 MFKEMQEACLRPTELTFVSVMSSCSS---ARVSHQVHAQAIKMGFEACTPVSNAAMTMYS 330
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G L F +E KD+++WN ++ ++ + + A F M R +E
Sbjct: 331 SCGNLHAVHMVFDRLEEKDLISWNIIIMNYAQGNFYRLAILAFLQMQRAGIE 382
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 34/181 (18%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTR--------------SRNFPATWA---- 62
A K V +VF+EI + D+ S + L + T+ R P W
Sbjct: 99 AKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIIT 158
Query: 63 -------------LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
LF MH + YTF VL CS L + G++VH L+IK G
Sbjct: 159 GCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLV 217
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
V AL+ MY G + ++ E F+E E D +T+N ++ G +EA +F+
Sbjct: 218 RASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKE 277
Query: 168 M 168
M
Sbjct: 278 M 278
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSALPAPERGKQV 98
L +N L TRS + A+ LF +HS+ L +T + L AC+ L G Q+
Sbjct: 16 QLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQL 75
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
HA I+ G + V L+ Y+K L F EIE DV +W LLS+ + G
Sbjct: 76 HAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQI 135
Query: 159 KEAFGVFQAMTR 170
A +F R
Sbjct: 136 GYACHLFNQTPR 147
>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
Length = 440
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 74/147 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF++++ D+ S S + + ++ LFC M ++ VL AC+
Sbjct: 20 YAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACA 79
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E GKQVHA +K G S V +L+ MY+K G + ++ + F +E +DV+TW A
Sbjct: 80 ELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKVFDSMEIQDVITWTA 139
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
L+ + ++G +E+ + M V+
Sbjct: 140 LIVGYAQNGRGRESLNFYNBMIASGVK 166
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+V AL+DMY+K G + + F+++ KDV++W +L++ + +G +EA +F M
Sbjct: 3 LVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEM 59
>gi|255568506|ref|XP_002525227.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535524|gb|EEF37193.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 420
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 76/137 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + R + ++ F M + T +T++ VL AC+++ +
Sbjct: 239 IFDGLPSRNEVSWNALIAGCARKGDQELAFSFFSKMLRENIQPTQFTYSIVLSACASIGS 298
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHAL+IK G V L+ MY+K G + ++ + F + +DVV+WN++L+
Sbjct: 299 LEQGKWVHALLIKSGAKLVDFVGNTLLGMYAKSGSIEDARKVFDGLVKRDVVSWNSMLAG 358
Query: 152 FLRHGLAKEAFGVFQAM 168
+ +HGL A +F+ M
Sbjct: 359 YAQHGLGNIALLIFRQM 375
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ + + + Y++ LF M + +T + +L A P
Sbjct: 137 KVFDQMPVKDVVTWTALITGYSQHDRPKDALLLFPQMLTLGFRPNHFTLSSLLKASGVSP 196
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+ +HA IK G V +AL+DMY++ G L E++ F + ++ V+WNAL++
Sbjct: 197 SDSNGRLLHAFCIKYGYSCNVYVGSALLDMYARSGHLEEALFIFDGLPSRNEVSWNALIA 256
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
R G + AF F M RE ++
Sbjct: 257 GCARKGDQELAFSFFSKMLRENIQ 280
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 49/83 (59%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ + G+ VHA ++ + V++ +++MY+K G LGE+ + F ++ KDVVTW
Sbjct: 91 CTLFNKLKEGQLVHAHLLNSRFKHDLVIQNTILNMYAKCGNLGEARKVFDQMPVKDVVTW 150
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
AL++ + +H K+A +F M
Sbjct: 151 TALITGYSQHDRPKDALLLFPQM 173
>gi|383152414|gb|AFG58299.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152415|gb|AFG58300.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152416|gb|AFG58301.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152417|gb|AFG58302.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152418|gb|AFG58303.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152419|gb|AFG58304.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152421|gb|AFG58305.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152422|gb|AFG58306.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152424|gb|AFG58308.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152425|gb|AFG58309.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152427|gb|AFG58311.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152428|gb|AFG58312.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L ++TF +L AC++L A ++GK +H +I+ G S V+ +L+DMY+K G L ++ +
Sbjct: 5 LDSHTFASILPACASLAALDQGKGIHEDIIRSGLQSYVTVENSLLDMYAKCGSLEDARKV 64
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + +DVV+WNA++ + HG KEA +F+ M
Sbjct: 65 FNRMTTRDVVSWNAMIVGYAIHGCGKEALQLFEQM 99
>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 700
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 19 ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYT 78
D L R +VFD + + ++ S + +Y ++ F T L M +T
Sbjct: 276 GDVLSAR-----KVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFT 330
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F +L A + + A G +HA + K G + +V AL++MYSK G + S + F ++
Sbjct: 331 FAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCGCIDSSYDVFFDMR 390
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+D++TWNA++ + +HGL K+A +FQ M
Sbjct: 391 NRDIITWNAMICGYSQHGLGKQALLLFQDM 420
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 54/94 (57%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ V+G C + G QVHA ++KGG + V + L+DM+ K G + + + F +
Sbjct: 229 TYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSARKVFDGL 288
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++VV W +L++++L++G +E + M RE
Sbjct: 289 QNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDRE 322
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 62/147 (42%), Gaps = 5/147 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+S + S N + Y S LF M S+ Y FT VL AC+
Sbjct: 77 LFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGR 136
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-----IEFKDVVTWN 146
G Q H + K G VK++L+ MYSK + +++ + D +N
Sbjct: 137 VFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYN 196
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
++L++ + G EA V M E V
Sbjct: 197 SVLNALVESGRLGEAVEVLGRMVDEGV 223
>gi|356504054|ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Glycine max]
Length = 563
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +F+++ ++ S NS + +Y + LF M ++ + TF VL
Sbjct: 262 RLKIARDLFNKMPQRNIVSWNSMINAYNQYERHQEALDLFFDMWTSGVYPDKATFLSVLS 321
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
C+ A G+ VHA ++K G ++ + TAL+DMY+K G LG + + F ++ KDVV
Sbjct: 322 VCAHQCALALGQTVHAYLLKTGIATDISLATALLDMYAKTGELGNAQKIFSSLQKKDVVM 381
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
W ++++ HG EA +FQ M +
Sbjct: 382 WTSMINGLAMHGHGNEALSMFQTMQED 408
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y V +I + + NS + + S N + L+ M + +TF VL AC
Sbjct: 56 YADLVLRQIHNPSVYIWNSMIRGFVNSHNPRMSMLLYRQMIENGYSPDHFTFPFVLKACC 115
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + GK +H+ ++K G +++ T L+ MY + ++ F I +VV W
Sbjct: 116 VIADQDCGKCIHSCIVKSGFEADAYTATGLLHMYVSCADMKSGLKVFDNIPKWNVVAWTC 175
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
L++ ++++ EA VF+ M+ VE
Sbjct: 176 LIAGYVKNNQPYEALKVFEDMSHWNVE 202
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD I ++ + + Y ++ +F M + T L AC+
Sbjct: 160 KVFDNIPKWNVVAWTCLIAGYVKNNQPYEALKVFEDMSHWNVEPNEITMVNALIACAHSR 219
Query: 91 APERGKQVHALMIKGGTD-------SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+ G+ VH + K G D S ++ TA+++MY+K G L + + F ++ +++V
Sbjct: 220 DIDTGRWVHQRIRKAGYDPFMSTSNSNIILATAILEMYAKCGRLKIARDLFNKMPQRNIV 279
Query: 144 TWNALLSSFLRHGLAKEAFGVF 165
+WN++++++ ++ +EA +F
Sbjct: 280 SWNSMINAYNQYERHQEALDLF 301
>gi|15240572|ref|NP_200385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171613|sp|Q9FM64.1|PP431_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g55740, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 21; Flags: Precursor
gi|9758608|dbj|BAB09241.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332009292|gb|AED96675.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 830
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ C+ +A +L Y +VFDEI + + N+ + Y ++ LF
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T T + L A + + E GKQ HA+ I G + + ++ T+L++ Y K GL
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + F + KDVVTWN ++S +++ GL ++A + Q M E++++
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH ++K G + V ++L DMY K G+L ++ + F EI ++
Sbjct: 179 VCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRN 238
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V WNAL+ ++++G +EA +F M ++ VE
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T ++ A +
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ V+ + +MDMY+K G + ++ + F KD++ WN
Sbjct: 387 RTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNT 446
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 447 LLAAYAESGLSGEALRLFYGMQLEGV 472
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L A++ T L AC+ L + G+ +H +I+ S V ++T+L+DMY+K G
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCG 596
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ + F + ++ NA++S++ +G KEA +++++
Sbjct: 597 DINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 34 DEISHGDLS-SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
DE +H S S ++ S ++ +L M L + + +L C
Sbjct: 27 DEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDL 86
Query: 93 ERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GKQ+HA ++K G ++T L+ Y+K L + F ++ ++V +W A++
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
R GL + A F M +
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEI 169
>gi|357450533|ref|XP_003595543.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484591|gb|AES65794.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 958
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 65/102 (63%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
+L Y F VL ACS L A GK+VH + ++ G + ++++AL+D+Y+K G++ +
Sbjct: 685 DLNFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESALVDLYAKCGMVDFACT 744
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F +E ++++TWN+++S F ++G EA +F+ M +E ++
Sbjct: 745 MFASMEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIK 786
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 30 HQVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACS 87
+VFDE+ D+ S + +TR+ F + F M+ + YTF +L AC+
Sbjct: 542 RRVFDELFVKDDVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACA 601
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWN 146
L +GK+VH ++ G VV+++L+DMY K G + S F+ + + K+ V+W
Sbjct: 602 NLGLLRQGKEVHGKVVGLGFGGNVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWT 661
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRER 172
A+L + ++ KE V + RER
Sbjct: 662 AMLGVYCQN---KEYQNVLD-LVRER 683
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 90 PAPERGKQV---HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD-VVTW 145
PA R K + H++++ G D VV +L+DMY + ++ F E+ KD V W
Sbjct: 498 PAHHRHKILKCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFVKDDVFCW 557
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRER 172
+++S F R+ + KE+ F M R R
Sbjct: 558 TSIISCFTRNDMFKESLKFFYVMNRVR 584
>gi|115444451|ref|NP_001046005.1| Os02g0167200 [Oryza sativa Japonica Group]
gi|113535536|dbj|BAF07919.1| Os02g0167200, partial [Oryza sativa Japonica Group]
Length = 526
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 18 IADALPKRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
+A + R V++ + +FD+IS +++ N+ L Y + T LF M +
Sbjct: 81 LASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDR 140
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
T +L +CS L + G+QVH+ ++ ++ V + L+DMYSK G +G + F +
Sbjct: 141 TTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNK 200
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ +DVV WN+++S H L KEAF F+ M +
Sbjct: 201 MTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGI 237
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 72/137 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F++++ D+ NS + T + F M + T ++ ++ +CS L +
Sbjct: 197 IFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSS 256
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q+HA ++K G D V +AL+DMY+K G + ++ F + K++V WN ++
Sbjct: 257 IPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHG 316
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++GL +A +F+ M
Sbjct: 317 YAQNGLGDKAVELFEYM 333
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 104 KGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
+ G S+ V +L+DMY+K + E+V+ F+ + +V+WN L++ F + G +A
Sbjct: 1 RKGFGSDQHVGNSLIDMYTKCVEMDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVE 60
Query: 164 VFQAMTRERVE 174
V M E
Sbjct: 61 VLSLMQEAGFE 71
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 76/145 (52%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V VFD+I D NS L +Y ++ + + +L C M + + T T V+ +
Sbjct: 211 VDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSS 270
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + G+++H + G VKTAL+DMY+K G + + F+ + K VV+WN
Sbjct: 271 ADIACLPHGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWN 330
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A+++ + HGLA EA +F+ M +E
Sbjct: 331 AIITGYAMHGLAVEALDLFERMMKE 355
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +FD+I G+L N + +Y + +L+ M L +T VL ACSAL
Sbjct: 113 HHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSAL 172
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +I+ G + + V AL+DMY+K G + ++ F +I +D V WN++L
Sbjct: 173 STIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSML 232
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+++ ++G E+ + M + V
Sbjct: 233 AAYAQNGHPDESLSLCCEMAAKGV 256
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y + +L +C + A E GKQ+HA + + G + T L++ YS L + F +
Sbjct: 59 YYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDK 118
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
I ++ WN L+ ++ +G + A ++ M
Sbjct: 119 IPKGNLFLWNVLIRAYAWNGPHETAISLYHQM 150
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFK 135
TF L ACS + G+ ++ LM++ P V+ T ++D+ G L E+ + +
Sbjct: 362 TFVGALAACSRGRLLDEGRALYNLMVR-DCRINPTVEHYTCMVDLLGHCGQLDEAYDLIR 420
Query: 136 EIE-FKDVVTWNALLSSFLRHG 156
+++ D W ALL+S HG
Sbjct: 421 QMDVMPDSGVWGALLNSCKTHG 442
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 74/130 (56%), Gaps = 1/130 (0%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
++ + Y ++ +F MHS + T +TF +L A S + A GKQ H LM+K
Sbjct: 295 SAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVK 354
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFG 163
G + + VK+AL+DMY+K G G++ + F ++ + DVV W A+++ +++G +EA
Sbjct: 355 LGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALM 414
Query: 164 VFQAMTRERV 173
++ M +E V
Sbjct: 415 LYSRMDKEGV 424
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 77/144 (53%), Gaps = 3/144 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ++D D+ + + + ++ L+ M + + T T VL AC+ L
Sbjct: 385 HQLYDV---DDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACL 441
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E GKQ+HA ++K G V TAL MYSK G L +S+ F+ + +D+++WN+++
Sbjct: 442 AALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSII 501
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S F +HG ++A +F+ M E +
Sbjct: 502 SGFSQHGRGRDALDLFEEMKLEGI 525
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 32 VFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSA 88
VF +I G D++S NS L +R + A M ST L T ++F V A +
Sbjct: 73 VFADIPAGLRDVASWNSLLNPLSRHQPLAALSHFRSMMSSTDAVLPTPHSFAAVFTAAAR 132
Query: 89 LPAPERGKQVHALMIK--GGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
+P+ G HA K + S V V TAL++MY K G + ++ F ++ ++ V+W
Sbjct: 133 VPSASAGAVAHAFACKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSW 192
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S + ++EAF +F+ M +E
Sbjct: 193 AAMVSGYATGKCSEEAFELFRLMLQE 218
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSAL 89
+VFD++ H + S + + Y + + LF M C L + T VL A S
Sbjct: 179 RVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQECPLEKNEFVATAVLSAVSVP 238
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G Q+H L++K G V+ +L+ MY+K + ++ F + ++ +TW+A++
Sbjct: 239 LGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMI 298
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + ++G A A +F M
Sbjct: 299 TGYAQNGEADCAATMFLQM 317
>gi|449453101|ref|XP_004144297.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
gi|449521874|ref|XP_004167954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g26540-like [Cucumis sativus]
Length = 697
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
Query: 9 NFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
N + T + A A + ++F+E+ ++ S N+ L Y S + M
Sbjct: 326 NLISWTSMVYAYATSGDVLKARELFNEMPERNVISWNAMLAGYIHSSQWEEALEFVHLMR 385
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
S+ ++ T +L C+ ERGKQVH + + G + + AL+DMY K G L
Sbjct: 386 SSIKDIDRTTLCLILNVCTGSSDVERGKQVHGFVYRTGFYANLYIGNALLDMYGKCGNLK 445
Query: 129 ESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F ++ +++D V+WNALL++ RHG++++A +F M E
Sbjct: 446 SAKVWFYQMSQWRDKVSWNALLTAHARHGMSEQAMTIFSEMQLE 489
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 77/141 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D S N+ + +YT++ L+ ++ + + T T +L +C ++
Sbjct: 115 ELFDEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGVYATEVTLASILRSCGSVL 174
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +Q+H ++K G +++++L+D+Y K L+ ++ F EI+ ++ V+WN ++
Sbjct: 175 ALHFSRQIHGHIVKCGFVGNVILESSLVDVYGKCRLMNDARSMFDEIQNRNDVSWNVIVR 234
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+L G KEA +F M RE
Sbjct: 235 RYLEVGNGKEAVSMFFQMFRE 255
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDEI + + S N + Y N ++F M L +++TF+ L ACS + A
Sbjct: 217 MFDEIQNRNDVSWNVIVRRYLEVGNGKEAVSMFFQMFRESLMPSSFTFSNALIACSRMAA 276
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q+H +++K G + V+ ++L+DMY K G L + + F + +++++W +++ +
Sbjct: 277 LIEGGQIHGIVVKVGLEENEVISSSLIDMYVKCGTLANAHQVFTQPSSRNLISWTSMVYA 336
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ G +A +F M V
Sbjct: 337 YATSGDVLKARELFNEMPERNV 358
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF +LGAC+ + A E GKQ+H M++ + V+ AL+DMY K L +++ F+
Sbjct: 495 FTFATLLGACANMFALEHGKQIHGFMVRNNYAIDIVLTGALVDMYCKCRELKYALKVFEH 554
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +DVV WN+++ + A +FQ MT E
Sbjct: 555 VASRDVVLWNSIILGCCHNRRDMLAIKLFQLMTME 589
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 34/56 (60%)
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ Y K G L ++ E F E+ +D +WNA+++++ ++G A EA ++ + + V
Sbjct: 101 IEAYGKCGCLKDARELFDEMPQRDGGSWNAMITAYTQNGYALEALNLYLDLNKSGV 156
>gi|222622248|gb|EEE56380.1| hypothetical protein OsJ_05522 [Oryza sativa Japonica Group]
Length = 518
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 18 IADALPKRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
+A + R V++ + +FD+IS +++ N+ L Y + T LF M +
Sbjct: 65 LASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDR 124
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
T +L +CS L + G+QVH+ ++ ++ V + L+DMYSK G +G + F +
Sbjct: 125 TTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNK 184
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ +DVV WN+++S H L KEAF F+ M +
Sbjct: 185 MTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGI 221
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 72/137 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F++++ D+ NS + T + F M + T ++ ++ +CS L +
Sbjct: 181 IFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSS 240
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q+HA ++K G D V +AL+DMY+K G + ++ F + K++V WN ++
Sbjct: 241 IPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHG 300
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++GL +A +F+ M
Sbjct: 301 YAQNGLGDKAVELFEYM 317
>gi|15231572|ref|NP_189286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273843|sp|Q9LRV2.1|PP256_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g26540
gi|9293933|dbj|BAB01836.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332643655|gb|AEE77176.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 700
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + ++ S N+ L Y + + M N+ T +L CS +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNAL 148
+ GKQ H + + G D+ +V AL+DMY K G L + F+++ E +D V+WNAL
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
L+ R G +++A F+ M E
Sbjct: 469 LTGVARVGRSEQALSFFEGMQVE 491
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ YT +L C+ +PA GK +H +I+ G + V++ A++DMYSK ++E F
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KE +D++ WN+++ R+G +KE F +F + E V+
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVK 594
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 17 SIADALPKRYVYT--HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
SI D K V + +VFDEI + S N + Y +F M +
Sbjct: 202 SIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + V+ ACS A E GK +HA+ +K ++ VV T++ DMY K L + F
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ KD+ +W + +S + GL +EA +F M +
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 67/139 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++F+E+ D S N+ + + ++ + +F M+ + T +F VL +C +
Sbjct: 116 RELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLI 175
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+Q+H ++K G ++T+++D+Y K ++ ++ F EI V+WN ++
Sbjct: 176 LDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+L G EA +F M
Sbjct: 236 RRYLEMGFNDEAVVMFFKM 254
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
T Q+ + + G++S S LF+ P ++ L+ + +C + A
Sbjct: 33 TRQILEHLEGGNVSKAVSVLFASPE----PVSYWLYERLFRSC-------------SSKA 75
Query: 89 LPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L R Q H + + P+ + ++ Y K G + ++ E F+E+ +D +WNA
Sbjct: 76 LVVQARKVQSHLVTF---SPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNA 132
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++++ ++G++ E F +F+ M R+ V
Sbjct: 133 VITACAQNGVSDEVFRMFRRMNRDGV 158
>gi|302801049|ref|XP_002982281.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
gi|300149873|gb|EFJ16526.1| hypothetical protein SELMODRAFT_116350 [Selaginella moellendorffii]
Length = 515
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 10/163 (6%)
Query: 23 PKRYVYTHQVFDEI----------SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
P R V Q+ EI H DL S + +Y + + L+ MHS +
Sbjct: 217 PNRLVDGRQIHSEIFDNIFSNSQQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQV 276
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
TF VL AC+ L +G+ +HA +++ G ++ V +++ MY K G E+
Sbjct: 277 EADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASI 336
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
F++ + KD+ W AL++S+ RHG ++A +F+ + ++ +E
Sbjct: 337 VFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIEL 379
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
I + N AK C ++ +A +VF+ I++ NS + +Y + R+ LF
Sbjct: 42 ISLVNMYAK-CGTVGEA--------RKVFERINNRSRILWNSMITAY-QERDPHEALHLF 91
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M ++ TF VL AC E G+ +H ++ G ++ V TAL +MY+K
Sbjct: 92 REMQPEGVSPDRITFMTVLNACVNAADLENGRTIHRRIVDSGFAADVRVATALFNMYAKC 151
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G LGE+ F + F+DVV+WN +++++++ + A + AM E
Sbjct: 152 GSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLE 198
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL AC +L + GK VHA +I+ G + + +V +L++MY+K G +GE+ + F+ I +
Sbjct: 10 VLEACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFERINNRS 68
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ WN++++++ EA +F+ M E V
Sbjct: 69 RILWNSMITAYQERD-PHEALHLFREMQPEGV 99
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF++ H D+S + + SY R + +F + + L+ TF +L ACS +
Sbjct: 337 VFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGL 396
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLS 150
E G + A M + G + + L+D+ ++ G L + E + + + ALL+
Sbjct: 397 IEEGCEFFASMAELGIEPNMEHYSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLA 456
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG + A V + +
Sbjct: 457 ACRVHGDVERARRVAEKL 474
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 81/173 (46%), Gaps = 8/173 (4%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRN 56
F+ + F A +S+A+ L Y HQV F IS + S S + SY ++
Sbjct: 233 GFVLQSGFEAD--VSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDE 290
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
+F + T + + VL AC+ L E GK VH L +K V +A
Sbjct: 291 EEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSA 350
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
L+DMY K G + ++ AF E+ +++VTWNA++ + G A A +F MT
Sbjct: 351 LVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMT 403
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 53/102 (51%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M + +TF A +L +P GKQVHAL +K G S+ V + DMYSK
Sbjct: 96 FSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSK 155
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
GL E+ + F E+ +++ TWNA LS+ + G +A F
Sbjct: 156 AGLTEEARKMFDEMPERNIATWNAYLSNSVLEGRYDDALTAF 197
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ ++++ N+ L + + F TF L AC+
Sbjct: 164 KMFDEMPERNIATWNAYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGAS 223
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H +++ G +++ V L+D Y K +G S F I + V+W +++
Sbjct: 224 YLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIV 283
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
S++++ ++A VF +E +E
Sbjct: 284 SYVQNDEEEKACLVFLRARKEGIE 307
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 11/179 (6%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
+T +C+++++AL Y +F+ I+ DL S NS + ++ + + T
Sbjct: 201 VTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGT 260
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG-----TDSEPVVKT 115
LF M + + T T VL ACS L A G+++H MI G + ++
Sbjct: 261 LRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNN 320
Query: 116 ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A+MDMY+K G + + F + KDV +WN ++ + HG EA +F M +++
Sbjct: 321 AIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIK 379
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ N+ + YT+ + +F M ++L+ +T T +L +++
Sbjct: 130 KVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMG 189
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ +H ++ K G S V AL+DMY K +++ F+ I KD+ +WN+++S
Sbjct: 190 DINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIIS 249
Query: 151 S 151
+
Sbjct: 250 A 250
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF V+ AC +++H + K G + V +AL++ Y K ++ + F+E
Sbjct: 78 FTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEE 134
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ +DVV WNA+++ + + G +A VF+ M E +
Sbjct: 135 LPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISL 173
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 2/141 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + D++S N + Y +F M + TF VL ACS
Sbjct: 338 IFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGF 397
Query: 92 PERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD-VVTWNALL 149
+G+ M ++ G T ++DM + G LGE+ + + I +D ++ W ALL
Sbjct: 398 VHQGRSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALL 457
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ HG A+ V + +T+
Sbjct: 458 GACRLHGNAELGNVVGEKITQ 478
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWNALLSSFLRHGLAKE 160
M+ G P T+L++MYS+ + E+V F++ ++V +NA+++ F+ +GLA +
Sbjct: 1 MVTSGFIHLPSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAAD 60
Query: 161 AFGVFQAM 168
F ++ M
Sbjct: 61 GFQFYKRM 68
>gi|383152429|gb|AFG58313.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
gi|383152430|gb|AFG58314.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L ++TF +L AC++L A ++GK +H +I+ G S V+ +L+DMY+K G L ++ +
Sbjct: 5 LDSHTFASILPACASLAALDQGKGIHEDIIRSGLQSCVTVENSLLDMYAKCGSLEDARKV 64
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + +DVV+WNA++ + HG KEA +F+ M
Sbjct: 65 FNRMTTRDVVSWNAMIVGYAIHGCGKEALQLFEQM 99
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F ++ N L +Y + + ++ LFC M + + +T+ +L C+
Sbjct: 300 EIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAG 359
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H L IK G +S+ V L+DMYSKYG L ++ + +E KDVV+W ++++
Sbjct: 360 EINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIA 419
Query: 151 SFLRHGLAKEAFGVFQAM 168
+++H KEA F+ M
Sbjct: 420 GYVQHEFCKEALETFKDM 437
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 6/162 (3%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y + +F+ I H D + N + + +S + +F M+
Sbjct: 481 VSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQ 540
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +TF + A + L ++GKQ+HA +IK G SE V AL+ +Y K G + +
Sbjct: 541 AGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIED 600
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F E+ ++ V+WN +++S +HG EA +F M +E
Sbjct: 601 AKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQE 642
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+++S D S + L Y R+ L+ MH + + T Y + VL AC+
Sbjct: 98 RVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAA 157
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+G+ VHA + K G+ SE VV AL+ +Y ++G L + F E+ + D VT+N L+S
Sbjct: 158 LFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLIS 217
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G + A +F+ M
Sbjct: 218 RHAQCGNGESALEIFEEM 235
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 75/139 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ + D + N+ + + + N + +F M + T +L AC+++
Sbjct: 199 RVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIG 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GKQ+H+ ++K G + +++ +L+D+Y K G++ E++E FK + +VV WN +L
Sbjct: 259 DLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLV 318
Query: 151 SFLRHGLAKEAFGVFQAMT 169
++ + ++F +F M
Sbjct: 319 AYGQISDLAKSFDLFCQMV 337
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 56/93 (60%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+ AC+ + A +G+Q+H+ + G ++ + AL+++Y++ G E+ F+ IE KD
Sbjct: 453 ISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDK 512
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+TWN ++S F + GL +EA VF M + V++
Sbjct: 513 ITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKY 545
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 42 SSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA-------LPAPER 94
+SLN L + + +LF C L + F L C +P
Sbjct: 7 ASLNKSLTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPV--- 63
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
+HA I G + + L+D+Y+K GL+ + F+++ +D V+W A+LS + R
Sbjct: 64 ---IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYAR 120
Query: 155 HGLAKEAFGVFQAM 168
+GL +EA G++ M
Sbjct: 121 NGLGEEAVGLYHQM 134
>gi|302803781|ref|XP_002983643.1| hypothetical protein SELMODRAFT_119022 [Selaginella moellendorffii]
gi|300148480|gb|EFJ15139.1| hypothetical protein SELMODRAFT_119022 [Selaginella moellendorffii]
Length = 396
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD I ++ N + +Y ++ +F L+ M+ L TF VL AC+
Sbjct: 13 KIFDRIPVKNVVCWNVMIAAYAQNGHFSEALELYYDMN---LKPDRVTFLNVLHACTL-- 67
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+ +H ++ G + + V AL++M+ K G L ++ F I F+DV++WNAL+S
Sbjct: 68 --ESGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMS 125
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++ G KEAF +F+ M R V
Sbjct: 126 VYIQQGRRKEAFELFKRMGRRSV 148
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 39/185 (21%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS----- 69
C S++DA +VFD I+ D+ S N+ + Y + + LF M
Sbjct: 99 CGSLSDA--------KRVFDRIAFRDVISWNALMSVYIQQGRRKEAFELFKRMGRRSVVS 150
Query: 70 -TCLNL-------------------------TAYTFTPVLGACSALPAPERGKQVHALMI 103
TC+ + A L AC+++ G+++H L+
Sbjct: 151 WTCMIMGMVEHGYGGRALDLYREMVVEGVRPDAVALVCALDACTSVENLAEGRKIHRLVE 210
Query: 104 KGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
++ V TA+++MY K G E+ F+ ++ V TWN+L+ ++ +HG A +A
Sbjct: 211 GTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQGMKTTTVATWNSLIGAYAQHGHATDALK 270
Query: 164 VFQAM 168
+++ M
Sbjct: 271 LYERM 275
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 1/151 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR +F+ + +++ N+ + Y ++ LFC M S + L +T V+
Sbjct: 396 KRVDIAASIFNNLEKTNVT-WNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVI 454
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
A + + K +H L ++ D+ V TAL+DMY+K G + + + F ++ + V+
Sbjct: 455 TALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQERHVI 514
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TWNA++ + HG+ KE +F M + V+
Sbjct: 515 TWNAMIDGYGTHGVGKETLDLFNEMQKGAVK 545
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+++F+ + H DL S + + Y ++ + L M + T +L A + +
Sbjct: 200 YKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADM 259
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G+ +H + G +S V AL+DMY K G + FK + K VV+WN ++
Sbjct: 260 KALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMI 319
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
++G ++EAF F M E
Sbjct: 320 DGCAQNGESEEAFATFLKMLDE 341
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T T VL AC+ L ERG VH L+ K DS V +L+ MYSK + + F
Sbjct: 346 TRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIF 405
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+E K VTWNA++ + ++G KEA +F M + ++
Sbjct: 406 NNLE-KTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKL 445
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 60/121 (49%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
L Y ++ + F M + L + +L C ++G+++H L+I G
Sbjct: 117 LKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGF 176
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+S V TA+M +Y+K + + + F+ ++ KD+V+W L++ + ++G AK A +
Sbjct: 177 ESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQ 236
Query: 168 M 168
M
Sbjct: 237 M 237
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F +I DL S N+ + +++ S + FC M T L TF +L AC +
Sbjct: 416 RAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPV 475
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALL 149
+G Q+H+ +IK G D E V +L+ MY+K L ++ FK++ E ++V+WNA+L
Sbjct: 476 TINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAIL 535
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S+ L+H A E F +F+ M
Sbjct: 536 SACLQHKQAGEVFRLFKLM 554
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTR-SRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+ V+ VF IS DL S S + +T+ A + + F V
Sbjct: 308 QIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFGSVF 367
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC +L PE G+Q+H + K G +L DMY+K+G L ++ AF +IE D+V
Sbjct: 368 SACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESPDLV 427
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+WNA++++F G EA F M
Sbjct: 428 SWNAIIAAFSDSGDVNEAIYFFCQM 452
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VF ++S + +L S N+ L + + + + LF M + T T +LG C+ L
Sbjct: 517 NVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAEL 576
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G QVH +K G + V L+DMY+K G L + + F + D+V+W++L+
Sbjct: 577 ASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLI 636
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ + GL EA +F+ M V+
Sbjct: 637 VGYAQFGLGHEALNLFRMMKNLGVQ 661
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF ++ AC + G+Q+H +IK G D + + AL+ MY+++G + + + F I
Sbjct: 260 TFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMI 319
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
KD+++W ++++ F + G EA +F+ M R+
Sbjct: 320 STKDLISWASMITGFTQLGYEIEALYLFRDMFRQ 353
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 62/102 (60%)
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
++ + L + T+ ++ AC+++ + + GK++H ++K + V++ +++MY K G L
Sbjct: 150 NSSIQLESSTYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLK 209
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ +AF ++ ++VV+W ++S + ++G +A ++ M +
Sbjct: 210 DARKAFDTMQLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQ 251
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ VF + D+ S +S + Y + LF M + + T+ VL ACS
Sbjct: 616 HARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACS 675
Query: 88 ALPAPERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
+ E G + M I+ G + ++D+ ++ G L E+ K++ F D+ W
Sbjct: 676 HIGLVEEGWHFYNTMEIELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMW 735
Query: 146 NALLSSFLRHG 156
LL+S HG
Sbjct: 736 KTLLASCKTHG 746
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 86/161 (53%), Gaps = 6/161 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +AL Y +V FD+I D S NS + + +S + +LF M
Sbjct: 609 LSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSK 668
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ ++TF P + A + + + GKQ+HA++IK G DSE V L+ +Y+K G + +
Sbjct: 669 AGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDD 728
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F E+ K+ ++WNA+L+ + +HG +A +F+ M +
Sbjct: 729 AERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQ 769
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+ F ++ N L +Y N ++ +F M + +T+ +L CS+L
Sbjct: 427 HEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSL 486
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + G+Q+H ++K G V + L+DMY+K G L +++ F+ ++ KDVV+W A++
Sbjct: 487 RAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMI 546
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ + +H EA +F+ M + +
Sbjct: 547 AGYAQHEKFAEALNLFKEMQDQGI 570
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 71/145 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D+ S + + Y + F LF M ++ F + AC+ +
Sbjct: 529 KIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQ 588
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+Q+HA G + V AL+ +Y++ G + ++ AF +I KD ++WN+L+S
Sbjct: 589 ALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLIS 648
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
F + G +EA +F M++ E
Sbjct: 649 GFAQSGHCEEALSLFSQMSKAGQEI 673
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D S + L ++S LFC MH++ + T Y F+ VL AC+ +
Sbjct: 226 KVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVE 285
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H L++K G E V AL+ +YS+ G + + F + +D V++N+L+S
Sbjct: 286 FYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLIS 345
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G + +A +F+ M
Sbjct: 346 GLSQQGYSDKALELFKKM 363
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
++ QVF+ + D S NS + ++ LF M CL T +L
Sbjct: 321 NFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLS 380
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS++ A GKQ H+ IK G S+ +++ AL+D+Y K + + E F E ++VV
Sbjct: 381 ACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVL 440
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN +L ++ E+F +F M E +E
Sbjct: 441 WNVMLVAYGLLDNLNESFKIFTQMQMEGIE 470
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ LS N L + + LF M + T+ VL C
Sbjct: 125 VFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDV 184
Query: 92 PERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
P +++HA I G ++ V L+D+Y K G L + + F ++ +D V+W A+LS
Sbjct: 185 PFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLS 244
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G +EA +F M
Sbjct: 245 GLSQSGCEEEAVLLFCQM 262
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 54/108 (50%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + + T+ +L C + G ++H ++K G +E V+ LMD+Y +G
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L +V F E+ + + WN +L F+ +A G+F+ M +E+V+
Sbjct: 119 LDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVK 166
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + DL S + Y ++ +++ M + T VL ACS L A
Sbjct: 372 FDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAAL 431
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E+GKQ+HA IK G E +++AL MY+K G L E V F+ + +D+V+WNA++S
Sbjct: 432 EQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGL 491
Query: 153 LRHGLAKEAFGVFQAMTRE 171
++G +EA +F+ M E
Sbjct: 492 SQNGHGREALELFEEMRLE 510
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 87/164 (53%), Gaps = 6/164 (3%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +AL Y Y+ +F+ S + + ++ + Y+++ + LF MH
Sbjct: 248 VSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHY 307
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +T VL ACS + A E GKQ H ++K G +++ TAL+DMY+K+G G+
Sbjct: 308 AGFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGD 367
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + F + D+V W ++++ ++++G +EA ++ M ++
Sbjct: 368 ARKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKI 411
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + +L S + + Y + +F M NL + FT VL SAL
Sbjct: 168 KLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVL---SALV 224
Query: 91 APE---RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
PE GKQVH +++K G V AL+ MY+K G L S+ F+ K+ +TW+A
Sbjct: 225 CPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSA 284
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L++ + + G + +A +F M
Sbjct: 285 LITGYSQAGDSHKALKLFSKM 305
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 80/164 (48%), Gaps = 9/164 (5%)
Query: 14 TCISIADALPKRYV---YTHQ---VFDEISHGDLSSLNSQL--FSYTRSRNFPATWALFC 65
+C +A+ L K Y + H VF+ + H ++ S N + S+ S+ LF
Sbjct: 41 SCNYLANNLIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFR 100
Query: 66 YMHSTCLNLTAYTFTPVLGACS-ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M + + A+TF V A + L +QVH L IK + + V ++L++ Y K
Sbjct: 101 RMIANNILPDAHTFPGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKV 160
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + E+ + F + +++V+W ++S + +AKEA GVF M
Sbjct: 161 GCVFEARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLM 204
>gi|297818196|ref|XP_002876981.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297322819|gb|EFH53240.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 693
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + ++ S N+ L Y R+ + M ++ T +L CS +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVRAHEWDDALDFLTLMRKEIEDIDNVTLVWILNVCSGI 408
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNAL 148
+ GKQ H + + G D +V AL+DMY K G L + F+++ E +D V+WNAL
Sbjct: 409 SDVQMGKQAHGFIYRHGYDMNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
L+ R G +++A F+ M E
Sbjct: 469 LTGVARVGRSEQALSFFEGMQME 491
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 59/100 (59%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ YT +L C+ +PA GK +H +I+ G + + V++ A++DMYSK ++E F
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRNGYNIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KE +D++ WN+++ R+G +KE F +F + E V+
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEDEGVK 594
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 2/159 (1%)
Query: 17 SIADALPKRYVYT--HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
SI D K V + +VFDEI + S N + Y +F M +
Sbjct: 202 SIVDVYGKCQVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + V+ ACS A E GK +HA+ +K ++ VV T++ DMY K L + F
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKISVVADTVVSTSIFDMYVKCDRLESARRVF 321
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + KD+ +W + +S + G+ +EA +F M +
Sbjct: 322 DQTKSKDLKSWTSAMSGYAMSGITREARELFDLMPERNI 360
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 66/139 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++F+++ D S N+ + + ++ + +F M+ + T +F VL +C +
Sbjct: 116 RELFEQMPERDGGSWNAVITACAQNGVSDEVFRMFHRMNRDGVRATETSFAGVLKSCGLV 175
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
Q+H ++K G ++T+++D+Y K ++ ++ F EI V+WN ++
Sbjct: 176 LDLRLLMQLHCAVVKYGYSGNIDLETSIVDVYGKCQVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+L G EA +F M
Sbjct: 236 RRYLEMGFNDEAVVMFFKM 254
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/149 (17%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
++ T Q+ + + G++S S LF+ + + + +
Sbjct: 29 KFTVTRQILEHLEGGNVSKAVSVLFASPEPVGY-------------------WLYERLFR 69
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+CS+ + ++V + ++ + ++ Y K G + ++ E F+++ +D +
Sbjct: 70 SCSSKSLVVQARKVQSHLVTFSPLPPSFLLNRAIEAYGKCGCVDDARELFEQMPERDGGS 129
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
WNA++++ ++G++ E F +F M R+ V
Sbjct: 130 WNAVITACAQNGVSDEVFRMFHRMNRDGV 158
>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
Length = 818
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + S N+ + +++S ++FC M + + T T++ VL AC++
Sbjct: 401 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 460
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ Q+H + K +++ V+ +L+D Y+K G + ++++ F+ + +D+++WNA++S
Sbjct: 461 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 520
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG A +A +F M + VE
Sbjct: 521 GYALHGQAADALELFDRMNKSNVE 544
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ I + D+ L+ + Y +S + LF + + + Y+ + VL AC+ +
Sbjct: 302 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 361
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ GKQ+H IK G +S+ V ALMD Y+K + S++ F + + V+WN ++ F
Sbjct: 362 DFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGF 421
Query: 153 LRHGLAKEAFGVFQAM 168
+ GL +EA VF M
Sbjct: 422 SQSGLGEEALSVFCEM 437
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+CS L + +H IK D+EP V AL+DMY+K G + ++ AF+ I + DV+
Sbjct: 253 SCSLLAISCARQGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVIL 312
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ ++S + + ++AF +F + R V
Sbjct: 313 LSFMISRYAQSNQNEQAFELFLRLMRSSV 341
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + ++ S + + ++ + +F A ALF + + + T +L A+
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A VH+ K G D V + L+D YS L+ ++ F I KD V W A++S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236
Query: 151 SFLRHGLAKEAFGVFQAMT 169
+ + + AF Q+ +
Sbjct: 237 CYSENDCPENAFRCAQSCS 255
>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
gi|194695290|gb|ACF81729.1| unknown [Zea mays]
Length = 539
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
++ S N+ + T++ + FC M + A TF + +CS L A +G+Q+H
Sbjct: 131 NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIH 190
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
AL IK G D V T+L+ MYS+ G LG+S E D+V +A++S++ HG +
Sbjct: 191 ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQ 250
Query: 160 EAFGVFQAM 168
+A G+F+ M
Sbjct: 251 KAVGLFKQM 259
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 66/144 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ ++++ N+ + T S + F M + Y + C+ L
Sbjct: 21 KLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLR 80
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+QVHA +++ G D + V ++L MY + G L + A + + ++V+ N +S
Sbjct: 81 DVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTIS 140
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++G A+ A F M VE
Sbjct: 141 GRTQNGDAEGALEFFCLMRGAGVE 164
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L+ Y K G L + + F E+ ++V TWNA+++ GL +E+ G F AM RE ++
Sbjct: 6 LIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63
>gi|225466051|ref|XP_002263650.1| PREDICTED: pentatricopeptide repeat-containing protein At4g25270,
chloroplastic [Vitis vinifera]
gi|296084180|emb|CBI24568.3| unnamed protein product [Vitis vinifera]
Length = 516
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 80/146 (54%), Gaps = 2/146 (1%)
Query: 25 RYVYTHQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
R H++FD++S + S+ NS + Y + AL+ M + +TF V
Sbjct: 129 RIEEAHRLFDQMSRRNRSAFAWNSLISGYAELGLYEDAMALYFQMEEEGVVPDRFTFPRV 188
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC + + G++VH +++ G + V AL+DMY+K G + ++ + F +I +D
Sbjct: 189 LKACGGIGSISVGEEVHRHVVRCGFADDGFVLNALVDMYAKCGDIVKARKVFDKIVCRDS 248
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+WN++L+ ++RHGL +A +F+ M
Sbjct: 249 VSWNSMLTGYIRHGLPLQALSIFRRM 274
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 3/125 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD+I D S NS L Y R ++F M A + V+
Sbjct: 234 VKARKVFDKIVCRDSVSWNSMLTGYIRHGLPLQALSIFRRMLQYGFEPDAVAISTVV--- 290
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ +P+ + Q+H +++ G + +L+ +YS +G L ++ F + +DVV+WN
Sbjct: 291 TGVPSLKLAGQIHGWVLRRGVQWNLSIANSLIVLYSNHGKLDQACWLFDHMPERDVVSWN 350
Query: 147 ALLSS 151
+++S+
Sbjct: 351 SIISA 355
>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
chloroplastic [Vitis vinifera]
Length = 704
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA VFD++ NS + Y +++ M + + +
Sbjct: 280 CGSIEDA--------QCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ ++ C+ L + E KQ HA +++ G + V TAL+D+YSK+G + ++ F
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ K+V++WNAL++ + HG EA +F+ M E
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHE 428
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ ++FDE+ ++ S N+ + + ++ + LF M + + F ++ A
Sbjct: 183 IDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRAS 242
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L G+Q+H+ +K G + V AL+DMYSK G + ++ F ++ K V WN
Sbjct: 243 AGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWN 302
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++++ + HG ++EA ++ M V+
Sbjct: 303 SIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
++ + T+ ++ AC L + K+V MI G D + ++ ++ M+ K G++ ++
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ K++++WN ++ + G EAF +F M ++
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQD 226
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD + H ++ S N+ + Y +F M + TF VL ACS
Sbjct: 389 HVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSG 448
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFKDVVT-WNAL 148
+RG ++ M + + A M ++ + GLL E+ K+ FK V W AL
Sbjct: 449 LSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAAL 508
Query: 149 LSSFLRH 155
L++ H
Sbjct: 509 LTACRVH 515
>gi|356528072|ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 647
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + +L S NS + Y ++ ++ LF M +T + V+ C+ L
Sbjct: 360 FERMPLKNLISWNSIIAGYEKNEDYKGAIQLFSRMQFEGERPDRHTLSSVMSVCTGLVNL 419
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSS 151
GKQ+H L+ K P+ +L+ MYS+ G + ++ F EI+ +KDV+TWNA++
Sbjct: 420 YLGKQIHQLVTKIVIPDSPI-NNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGG 478
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HGLA EA +F+ M R ++
Sbjct: 479 YASHGLAAEALELFKLMKRLKI 500
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C +I DA VF+EI + D+ + N+ + Y LF M ++
Sbjct: 450 CGAIVDACT--------VFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKIH 501
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVE 132
T TF V+ AC+ E G++ MI G + +L+D+ + G L E+++
Sbjct: 502 PTYITFISVMNACAHAGLVEEGRRQFKSMINDYGIERRVEHFASLVDILGRQGQLQEAMD 561
Query: 133 AFKEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ FK D W ALLS+ H + A A+ R
Sbjct: 562 LINTMPFKPDKAVWGALLSACRVHNNVELALVAADALIR 600
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 11/140 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM---HSTCLNLTAYTFTPVLGACSA 88
+FD + H D + NS + Y R LF M NL + +C
Sbjct: 61 LFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVVSWNLIVSGYF----SCRG 116
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E G+++ LM + + V ++ Y+K G + ++++ F + ++ V+ NAL
Sbjct: 117 SRFVEEGRRLFELMPQ----RDCVSWNTVISGYAKNGRMDQALKLFNAMPERNAVSSNAL 172
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
++ FL +G A F+ M
Sbjct: 173 ITGFLLNGDVDSAVDFFRTM 192
>gi|297734415|emb|CBI15662.3| unnamed protein product [Vitis vinifera]
Length = 657
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA VFD++ NS + Y +++ M + + +
Sbjct: 280 CGSIEDA--------QCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ ++ C+ L + E KQ HA +++ G + V TAL+D+YSK+G + ++ F
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ K+V++WNAL++ + HG EA +F+ M E
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHE 428
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ ++FDE+ ++ S N+ + + ++ + LF M + + F ++ A
Sbjct: 183 IDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFSDAGSRMFVTMIRAS 242
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L G+Q+H+ +K G + V AL+DMYSK G + ++ F ++ K V WN
Sbjct: 243 AGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWN 302
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++++ + HG ++EA ++ M V+
Sbjct: 303 SIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 53/99 (53%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
++ + T+ ++ AC L + K+V MI G D + ++ ++ M+ K G++ ++
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ K++++WN ++ + G EAF +F M ++
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQD 226
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD + H ++ S N+ + Y +F M + TF VL ACS
Sbjct: 389 HVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSG 448
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFKDVVT-WNAL 148
+RG ++ M + + A M ++ + GLL E+ K+ FK V W AL
Sbjct: 449 LSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAAL 508
Query: 149 LSSFLRH 155
L++ H
Sbjct: 509 LTACRVH 515
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 2/155 (1%)
Query: 18 IADALPKRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC-YMHSTCLNLT 75
IA + + Y+ + Q +FDEI D+ S N+ + Y + N+ LF M T +
Sbjct: 162 IAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPD 221
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
T V+ AC+ + E G+ VH+ + G S + AL+D+YSK+G + + E F
Sbjct: 222 ESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFD 281
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ KDV++WN L+ + L KEA +FQ M R
Sbjct: 282 GLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 316
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 74/148 (50%), Gaps = 4/148 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + + D+ S N+ + YT + LF M + T +L AC+ L
Sbjct: 278 ELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 337
Query: 91 APERGKQVHALM---IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWN 146
A + G+ +H + +KG + ++T+L+DMY+K G + + + F + + + TWN
Sbjct: 338 AIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWN 397
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A++S F HG A AF +F M +E
Sbjct: 398 AMISGFAMHGRANAAFDIFSRMRMNGIE 425
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 35/180 (19%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D P Y VFD I +L N+ + S + + L+ M S L +YTF
Sbjct: 37 DGFP----YAISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTF 92
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES--------- 130
+L +C+ + G+Q+H ++K G D + V T+L+ MY++ G L ++
Sbjct: 93 PFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSH 152
Query: 131 ------------------VEA----FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+E+ F EI KDVV+WNA++S ++ G KEA +F+ M
Sbjct: 153 RDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEM 212
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 5/131 (3%)
Query: 30 HQVFDE-ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
QVFD +S+ LS+ N+ + + A + +F M + TF +L ACS
Sbjct: 381 QQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSH 440
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
+ G+ + M + G + P ++ ++D+ GL E+ E + + D V W
Sbjct: 441 SGMLDLGRNIFRSMTR-GYEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIW 499
Query: 146 NALLSSFLRHG 156
+LL + HG
Sbjct: 500 CSLLKACKIHG 510
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 80/140 (57%), Gaps = 1/140 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+EI D+ S + + +S + LF M + ++TF +LGAC+
Sbjct: 300 RLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSFTFGGLLGACADAN 359
Query: 91 APERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A ++G+ H L++K G ++ VV +A++DMYSK G +G+++ AF+E+ +D+ +WN ++
Sbjct: 360 AFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQEMPERDIASWNGII 419
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
+ ++G +A ++ M
Sbjct: 420 CGYAQNGAGMKALKLYNEMV 439
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 4/143 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD S D S N L ++ F M + + +T+ ++ C
Sbjct: 102 KLFDGTSKRDCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCCDL-- 159
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+QVHA ++K +D + + T L+ MY++ G +G++ + F + + +VTWNA++S
Sbjct: 160 --GFGQQVHADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMIS 217
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ ++G ++ G+F+ + RE +
Sbjct: 218 CYSKYGRGDKSIGLFRQLXREGI 240
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + L + N+ + Y++ + LF + ++ YT+ VL +A
Sbjct: 199 KVFDGMPSRGLVTWNAMISCYSKYGRGDKSIGLFRQLXREGISADEYTYAIVLNEFAARW 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
QVH+L+I+ G S+ AL+++YSK G + + F+EI +DVV+W ++
Sbjct: 259 QVFEAMQVHSLIIERGFCSDRFTNNALVNLYSKCGYVASASRLFEEIPDQDVVSWTVIIV 318
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
FL+ G +EA +F M +E
Sbjct: 319 GFLQSGHMEEAMWLFYQMQLGDIE 342
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 24 KRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
K Y+ + Q +FDEI D+ S N+ + Y + N LF M T + T V
Sbjct: 182 KGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSV 241
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+ AC+ + E G+QVH+ + G S + AL+D+Y K G + + F+ + +KDV
Sbjct: 242 VSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDV 301
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++WN L+ + L KEA +FQ M R
Sbjct: 302 ISWNTLIGGYTHMNLYKEALLLFQEMLR 329
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ I +AL Y+ +V F+ +S+ D+ S N+ + YT + LF M
Sbjct: 270 LKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 329
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLL 127
+ + T +L AC+ L A E G+ +H + K G + +T+L+DMY+K G +
Sbjct: 330 SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI 389
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F I + + +WNA++ F HG A AF +F M + +E
Sbjct: 390 EAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 436
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I +L N+ + S + + L+ M S L YTF
Sbjct: 51 DGLP----YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTF 106
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK---- 135
+L +C+ A G+Q+H ++K G D + V T+L+ MY + G L ++ + F
Sbjct: 107 PFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSH 166
Query: 136 ---------------------------EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
EI KDVV+WNA++S + G KEA +F+ M
Sbjct: 167 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 226
Query: 169 TRERV 173
+ V
Sbjct: 227 MKTNV 231
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFD I + LSS N+ +F + A + +F M + TF +L ACS
Sbjct: 393 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHS 452
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
+ G+ + M K P ++ ++D+ GL E+ E +E + D V W
Sbjct: 453 GMLDLGRHIFRSM-KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWC 511
Query: 147 ALLSS 151
+LL +
Sbjct: 512 SLLKA 516
>gi|302782902|ref|XP_002973224.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
gi|300158977|gb|EFJ25598.1| hypothetical protein SELMODRAFT_98955 [Selaginella moellendorffii]
Length = 546
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 78/142 (54%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F ++S ++ N+ + Y + ++ L+ M+ L YTF+ VLGACS
Sbjct: 267 FTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDL 326
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G+ VHA ++ GG + ++ L++M++K G L ++E F+ + ++ V+WN+++++F
Sbjct: 327 SEGRAVHARIVSGGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAF 386
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+HG AF +F+ M E E
Sbjct: 387 CQHGEGGGAFELFKEMLLEGAE 408
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 62/100 (62%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TF +LGACS L E G+++HA M+ G D++ VV TA++ MYSK LG++ + F
Sbjct: 9 NSVTFLWILGACSNLGDVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKVF 68
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ KDVV+W A++++F + G + A +F M + V+
Sbjct: 69 DSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVK 108
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V FD + S N+ + +Y + + +L+ M +T +LGAC
Sbjct: 163 VEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQAISLYKEMDVHGAEPDTFTHVCLLGAC 222
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+L A E G+++HA M G + + +A++ MY+K G + ++ AF ++ +VV WN
Sbjct: 223 SSLGALEEGERIHARM---GDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWN 279
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AL++ +++ +EA ++ AM E +E
Sbjct: 280 ALIAGYVQGEHWQEALDLYHAMNLEGLE 307
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + + ++++ LF M + TF +L AC+ +
Sbjct: 66 KVFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMD 125
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G +++ I G ++ V + + MYS++G L E+ AF + K +WNA++
Sbjct: 126 ALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVR 185
Query: 151 SFLRHGLAKEAFGVFQAM 168
++++HG +A +++ M
Sbjct: 186 AYIQHGHISQAISLYKEM 203
>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
Length = 704
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA VFD++ NS + Y +++ M + + +
Sbjct: 280 CGSIEDA--------QCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF+ ++ C+ L + E KQ HA +++ G + V TAL+D+YSK+G + ++ F
Sbjct: 332 DNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVF 391
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ K+V++WNAL++ + HG EA +F+ M E
Sbjct: 392 DMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHE 428
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 74/149 (49%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ ++FDE+ ++ S N+ + + ++ + LF M + + F ++ A
Sbjct: 183 IDARRLFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFSDAGSRMFVTMIRAS 242
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L G+Q+H+ +K G + V AL+DMYSK G + ++ F ++ K V WN
Sbjct: 243 AGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEKTTVGWN 302
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++++ + HG ++EA ++ M V+
Sbjct: 303 SIIAGYALHGYSEEALSMYYEMRDSGVKI 331
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
++ + T+ ++ AC L + K+V MI G D + ++ ++ M+ K G++ ++
Sbjct: 128 DMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRVLLMHVKCGMMIDARR 187
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F E+ K++++WN ++ + G EAF +F M
Sbjct: 188 LFDEMPEKNILSWNTIIGGLVDAGDYFEAFRLFLMM 223
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD + H ++ S N+ + Y +F M + TF VL ACS
Sbjct: 389 HVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSG 448
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFKDVVT-WNAL 148
+RG ++ M + + A M ++ + GLL E+ K+ FK V W AL
Sbjct: 449 LSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAAL 508
Query: 149 LSSFLRH 155
L++ H
Sbjct: 509 LTACRVH 515
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + S N+ + +++S ++FC M + + T T++ VL AC++
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 479
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ Q+H + K +++ V+ +L+D Y+K G + ++++ F+ + +D+++WNA++S
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 539
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG A +A +F M + VE
Sbjct: 540 GYALHGQAADALELFDRMNKSNVE 563
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ I + D+ L+ + Y +S + LF + + + Y+ + VL AC+ +
Sbjct: 321 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 380
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ GKQ+H IK G +S+ V ALMD Y+K + S++ F + + V+WN ++ F
Sbjct: 381 DFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGF 440
Query: 153 LRHGLAKEAFGVFQAM 168
+ GL +EA VF M
Sbjct: 441 SQSGLGEEALSVFCEM 456
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+ I D + + Y+ + + +F M + + T VL A LP
Sbjct: 218 HVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLP 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H IK D+EP V AL+DMY+K G + ++ AF+ I + DV+ + ++S
Sbjct: 278 SVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMIS 337
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + ++AF +F + R V
Sbjct: 338 RYAQSNQNEQAFELFLRLMRSSV 360
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + ++ S + + ++ + +F A ALF + + + T +L A+
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A VH+ K G D V + L+D YS L+ ++ F I KD V W A++S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + + AF VF M
Sbjct: 237 CYSENDCPENAFRVFSKM 254
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 80/147 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VFDE + N+ + Y+ F ++ M ++ +N +T VL ACS
Sbjct: 121 YARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACS 180
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+P E GK+VH + + G +S+ V+ L+ +Y+K G + ++ F+ ++ +++V+W +
Sbjct: 181 GVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTS 240
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S + ++GL EA +F M + V+
Sbjct: 241 MISGYGQNGLPMEALRIFGQMRQRNVK 267
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 15/127 (11%)
Query: 47 QLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG 106
++F R RN W VL A + + E+GK +H ++K G
Sbjct: 256 RIFGQMRQRNVKPDWI---------------ALVSVLRAYTDVEDLEQGKSIHGCVVKMG 300
Query: 107 TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
+ EP + +L MY+K G + + F ++E +V+ WNA++S + ++G EA G+FQ
Sbjct: 301 LEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQ 360
Query: 167 AMTRERV 173
M + +
Sbjct: 361 EMISKNI 367
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD++ ++ N+ + Y ++ LF M S + + T + AC+ + +
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ K + + K ++ V TAL+DM++K G + + E F KDVV W+A++ +
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGY 447
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
HG ++A +F AM + V
Sbjct: 448 GLHGRGQDAIDLFYAMKQAGV 468
>gi|222625199|gb|EEE59331.1| hypothetical protein OsJ_11408 [Oryza sativa Japonica Group]
Length = 691
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + S N+ + +++S ++FC M + + T T++ VL AC++
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 479
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ Q+H + K +++ V+ +L+D Y+K G + ++++ F+ + +D+++WNA++S
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 539
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG A +A +F M + VE
Sbjct: 540 GYALHGQAADALELFDRMNKSNVE 563
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ I + D+ L+ + Y +S + LF + + + Y+ + VL AC+ +
Sbjct: 321 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 380
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ GKQ+H IK G +S+ V ALMD Y+K + S++ F + + V+WN ++ F
Sbjct: 381 DFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGF 440
Query: 153 LRHGLAKEAFGVFQAM 168
+ GL +EA VF M
Sbjct: 441 SQSGLGEEALSVFCEM 456
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+ I D + + Y+ + + +F M + + T VL A LP
Sbjct: 218 HVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLP 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H IK D+EP V AL+DMY+K G + ++ AF+ I + DV+ + ++S
Sbjct: 278 SVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMIS 337
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + ++AF +F + R V
Sbjct: 338 RYAQSNQNEQAFELFLRLMRSSV 360
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + ++ S + + ++ + +F A ALF + + + T +L A+
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A VH+ K G D V + L+D YS L+ ++ F I KD V W A++S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + + AF VF M
Sbjct: 237 CYSENDCPENAFRVFSKM 254
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + S N+ + +++S ++FC M + + T T++ VL AC++
Sbjct: 420 KIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTA 479
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ Q+H + K +++ V+ +L+D Y+K G + ++++ F+ + +D+++WNA++S
Sbjct: 480 SIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIIS 539
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG A +A +F M + VE
Sbjct: 540 GYALHGQAADALELFDRMNKSNVE 563
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 70/136 (51%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ I + D+ L+ + Y +S + LF + + + Y+ + VL AC+ +
Sbjct: 321 FEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQL 380
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ GKQ+H IK G +S+ V ALMD Y+K + S++ F + + V+WN ++ F
Sbjct: 381 DFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGF 440
Query: 153 LRHGLAKEAFGVFQAM 168
+ GL +EA VF M
Sbjct: 441 SQSGLGEEALSVFCEM 456
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+ I D + + Y+ + + +F M + + T VL A LP
Sbjct: 218 HVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLP 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK +H IK D+EP V AL+DMY+K G + ++ AF+ I + DV+ + ++S
Sbjct: 278 SVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMIS 337
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + ++AF +F + R V
Sbjct: 338 RYAQSNQNEQAFELFLRLMRSSV 360
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + ++ S + + ++ + +F A ALF + + + T +L A+
Sbjct: 117 RLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMD 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A VH+ K G D V + L+D YS L+ ++ F I KD V W A++S
Sbjct: 177 AAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVS 236
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + + AF VF M
Sbjct: 237 CYSENDCPENAFRVFSKM 254
>gi|413948598|gb|AFW81247.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 788
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 17 SIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--H 68
S+A++L K Y +F E D+ S ++ + YT+ ++ALF M H
Sbjct: 296 SVANSLVKLYSRRGHLSAADAIFRESVVKDVVSWSTIISGYTQEGLAEESFALFSEMRHH 355
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
S+C +T + C++ + + G+Q+HAL + G + +V++AL++MY K G +
Sbjct: 356 SSCPRPNEFTLASLFSVCASAASLDTGRQLHALAVAAGLEHHAMVRSALVNMYGKGGSMS 415
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ F DV++W A++ HG +KEAF +F+ M R
Sbjct: 416 DANVVFSNRTKDDVISWTAMIVGHAEHGHSKEAFELFEEMCR 457
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF+ V+ AC + G+Q+HA + G V +L+ +YS+ G L + F+E
Sbjct: 261 YTFSAVIAACPNMDRAYLGEQLHAQAARRGLSHARSVANSLVKLYSRRGHLSAADAIFRE 320
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KDVV+W+ ++S + + GLA+E+F +F M
Sbjct: 321 SVVKDVVSWSTIISGYTQEGLAEESFALFSEM 352
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 5 IRMTNFPAK-TCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
+R ++ P+ ++ADA K R QV DE+ ++ S + + S R+
Sbjct: 81 VRSSSLPSVFVSTALADAYAKAGRLDLALQVLDEMPSRNVVSWTTLVASLARAGRRHDAL 140
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
F M ++ + ++ + L AC+ RG++VHAL K G D+ P V AL +Y
Sbjct: 141 RRFAEMRASGVACDSHACSAALTACADAGLLPRGREVHALCAKLGLDAVPFVANALAALY 200
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ G + ++ A + DV L++S+++ G +EA F M R+
Sbjct: 201 ARCGDVDRALAAVGRMGSHDVAVCTTLIASYVQTGRTEEAIEAFVRMLRD 250
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D+ + ++ + YT+S A+F M T +N T VL AC+ L
Sbjct: 328 RLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLG 387
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GK VH+ + + ++ TAL+D Y+K G + ++V+AF+ + ++ TW AL+
Sbjct: 388 ALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAVKAFESMPVRNTWTWTALIK 447
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+G ++EA +F +M +E
Sbjct: 448 GMASNGRSREALELFSSMLEANIE 471
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V H +F + + + N+ + Y ++ ++ +F M T V AC
Sbjct: 223 VAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLSVATAC 282
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
L G+ + + G + TAL+DMY+K G L ++ F + +DVV W+
Sbjct: 283 GRLGDANLGQWIAEYAEEKGMLRSRNLATALVDMYAKCGELDKARRLFDRMHSRDVVAWS 342
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++S + + +EA +F M
Sbjct: 343 AMISGYTQSDRCREALAIFNEM 364
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSALPAPERGKQVHAL 101
S N + S+ R+ + LF M T ++ +T + +CS + G+ V A
Sbjct: 137 SYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAY 196
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
K G + V +L+ MY+ G + + F ++ K V+ WNA+++ ++++G KE
Sbjct: 197 AFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKNGDWKEV 256
Query: 162 FGVFQAMTRERVEF 175
+F+ M R F
Sbjct: 257 VEMFKGMLEVRAPF 270
>gi|302754546|ref|XP_002960697.1| hypothetical protein SELMODRAFT_73641 [Selaginella moellendorffii]
gi|300171636|gb|EFJ38236.1| hypothetical protein SELMODRAFT_73641 [Selaginella moellendorffii]
Length = 462
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 72/146 (49%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V + +VFD + D+ S NS + Y + A LF M + TF L AC
Sbjct: 182 VDSRRVFDGMRRHDVVSWNSLISGYADNDQGEAALELFVPMELEGCAHDSRTFLASLKAC 241
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ A + G+ +H + + G DS+ V+ T+L+D Y K G + ++ + F I KD+V WN
Sbjct: 242 GCVGALDIGRTLHGKIRELGLDSDVVIATSLVDFYGKCGSMVDAEQVFSSIVTKDIVAWN 301
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRER 172
ALL+ + R G + F F M R
Sbjct: 302 ALLTGYSRQGDTEALFQAFDRMMASR 327
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 65/138 (47%), Gaps = 12/138 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ADA ++FD + D+ SL S + Y + LF M C
Sbjct: 5 CGSMADA--------RKIFDRMQRPDVVSLTSLVLGYAENGEAQEALRLFQLMKGGC-EP 55
Query: 75 TAYTFTPVLGACSALPAPERGKQ---VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
A TF L ACS+L A E K+ +H+ + DS+ + L+D Y+K G L +S
Sbjct: 56 NARTFVAGLKACSSLAAREEAKKTMAIHSRAARAKHDSDNFIANTLVDAYAKCGSLPDSQ 115
Query: 132 EAFKEIEFKDVVTWNALL 149
F I +DVV+W AL+
Sbjct: 116 RVFDRISRRDVVSWTALI 133
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 38/166 (22%)
Query: 9 NFPAKTCISI---ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
NF A T + +LP + +VFD IS D+ S + + + S + LF
Sbjct: 95 NFIANTLVDAYAKCGSLPD----SQRVFDRISRRDVVSWTALILGHAESDHPQVALELFS 150
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+ +N + TF + V +L+DMY+K G
Sbjct: 151 GLEDCYVN--SLTFWDLF-----------------------------VANSLVDMYAKCG 179
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +S F + DVV+WN+L+S + + + A +F M E
Sbjct: 180 SMVDSRRVFDGMRRHDVVSWNSLISGYADNDQGEAALELFVPMELE 225
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 16/173 (9%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ +F K C S+ DA QVF I D+ + N+ L Y+R + A + F
Sbjct: 272 LVDFYGK-CGSMVDA--------EQVFSSIVTKDIVAWNALLTGYSRQGDTEALFQAFDR 322
Query: 67 MHSTCLNL--TAYTFTPVLGACSALPAPERGKQ-VHALMIKGGTDSEPVVKTALMDMYSK 123
M ++ + TF VL ACS E+GK+ A+ G D L+D+ +
Sbjct: 323 MMASRPRVRPDGVTFLCVLTACSHSGLVEQGKRYFEAMKSIHGLDPGMEHYHCLVDILGR 382
Query: 124 YGLLGESVEAFKEIE-FKDVVTWNALLSSFLRHG---LAKEAFGVFQAMTRER 172
L E+V KE+ ++V+W +LS+ + +AK AF + E+
Sbjct: 383 SNRLEEAVAMVKEMPVVANIVSWTTVLSACQKWKNIEVAKVAFDALLELDEEQ 435
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ +++AL YV QVFDE++ D+ S S + + LF M S
Sbjct: 167 LEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQS 226
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + T VL AC+ L A + G+ VH + + + + TA++DMY+K G +
Sbjct: 227 SGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEM 286
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
S++ F + K+V+TWNALL+ HG A + +F+ M R
Sbjct: 287 SMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVR 327
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR+ +VFDE+ D+ S + Y R+ F LF M + A TF VL
Sbjct: 83 KRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMD---VEPNAATFVSVL 139
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC GK +H L K V ALMDMY K G L + + F E+ KD+V
Sbjct: 140 VACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIV 199
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+W +++S ++ KEA +FQ M +E
Sbjct: 200 SWTSIISGLVQCNCPKEALELFQDMQSSGIE 230
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF VL +C+ G+QVH ++IK G V+ +L+ YS G++ F E
Sbjct: 35 FTFPAVLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDE 94
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +DVV+W ++S ++R GL EA G+F M E
Sbjct: 95 MLVRDVVSWTGVISGYVRAGLFDEAVGLFLRMDVE 129
>gi|224094065|ref|XP_002310070.1| predicted protein [Populus trichocarpa]
gi|222852973|gb|EEE90520.1| predicted protein [Populus trichocarpa]
Length = 438
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%), Gaps = 2/139 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ S + + Y +S N+ A+F M ++ T VL AC+ L A
Sbjct: 98 LFDLMPERDVRSWSCLIDGYAKSGNYGDAMAVFEKMRTSGPKANEVTMVSVLCACAHLGA 157
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK--DVVTWNALL 149
++G+ +H ++ G + V++T+L+DMY+K G + E+ F+ + + DV+ WNA++
Sbjct: 158 LDKGRMMHQYLVDNGFELNLVLRTSLIDMYAKCGAVEEAFAVFRGVSLRKSDVLIWNAMI 217
Query: 150 SSFLRHGLAKEAFGVFQAM 168
HGL KE+ ++ M
Sbjct: 218 GGLATHGLVKESLDLYTEM 236
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A S L E G +H +IK G + + V +L+ MY G + + + F K++V+
Sbjct: 19 ATSRLLRKELGVSIHGHVIKSGFEIDRFVANSLIHMYGSCGDIVYARKVFDGTPVKNLVS 78
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
WN+++ + + G A G+F M V
Sbjct: 79 WNSMVDGYAKCGYLDLARGLFDLMPERDV 107
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 69/142 (48%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + S N+ + + R L M T +T++ V AC+++ A
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGAL 306
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E+GK VHA MIK G + L+DMY+K G + ++ F + DVV+WN +L+
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGC 366
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+HGL KE F+ M R +E
Sbjct: 367 AQHGLGKETLDRFEQMLRIGIE 388
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D+ + + + ++++ LF M L +T + +L A +
Sbjct: 144 RMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKASGSEH 203
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+HA +K G S V +AL+DMY++ G + + AF + K V+WNAL+S
Sbjct: 204 GLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWNALIS 263
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
R G + A + M R+ +
Sbjct: 264 GHARKGEGEHALHLLWKMQRKNFQ 287
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
++ +L C+ L E+G+ VHA ++ D+ V++ +++MY+K G L ++ F E+
Sbjct: 90 YSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCLDDARRMFDEM 149
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KD+VTW AL++ F ++ ++A +F M R
Sbjct: 150 PTKDMVTWTALIAGFSQNNRPRDALLLFPQMLR 182
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S N+ + + R LF M + +++ + GACS+
Sbjct: 209 VFDALESRNDVSWNALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGF 268
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK G L+DMY+K G + ++ + F + +DVV+WN+LL++
Sbjct: 269 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 328
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ +HG EA F+ M R
Sbjct: 329 YAQHGFGNEAVCWFEEMRR 347
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR-SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD++ D + + + Y++ R F A LF M + +T + V+ A +A
Sbjct: 107 KVFDKMPERDFVTWTTLISGYSQHDRPFDAL-VLFNQMLRFGFSPNEFTLSSVIKAAAAE 165
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G Q+H +K G DS V +AL+D+Y++YGL+ ++ F +E ++ V+WNAL+
Sbjct: 166 RRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALI 225
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+ R ++A +FQ M RE
Sbjct: 226 AGHARRCGTEKALELFQGMLRE 247
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 48/92 (52%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ +G+ VH +I+ + V+ L++MY+K G L E+ + F ++
Sbjct: 54 YNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMP 113
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+D VTW L+S + +H +A +F M R
Sbjct: 114 ERDFVTWTTLISGYSQHDRPFDALVLFNQMLR 145
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 1/148 (0%)
Query: 24 KRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
K Y+ + Q +FDEI D+ S N+ + Y + N LF M T + T V
Sbjct: 167 KGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSV 226
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+ AC+ + E G+QVH+ + G S + AL+D+Y K G + + F+ + +KDV
Sbjct: 227 VSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDV 286
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++WN L+ + L KEA +FQ M R
Sbjct: 287 ISWNTLIGGYTHMNLYKEALLLFQEMLR 314
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 8/167 (4%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ I +AL Y+ +V F+ +S+ D+ S N+ + YT + LF M
Sbjct: 255 LKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 314
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLL 127
+ + T +L AC+ L A E G+ +H + K G + +T+L+DMY+K G +
Sbjct: 315 SGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDI 374
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F I + + +WNA++ F HG A AF +F M + +E
Sbjct: 375 EAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIE 421
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 79/185 (42%), Gaps = 35/185 (18%)
Query: 20 DALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTF 79
D LP Y VF+ I +L N+ + S + + L+ M S L YTF
Sbjct: 36 DGLP----YAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTF 91
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK---- 135
+L +C+ A G+Q+H ++K G D + V T+L+ MY + G L ++ + F
Sbjct: 92 PFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSH 151
Query: 136 ---------------------------EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
EI KDVV+WNA++S + G KEA +F+ M
Sbjct: 152 RDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEM 211
Query: 169 TRERV 173
+ V
Sbjct: 212 MKTNV 216
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFD I + LSS N+ +F + A + +F M + TF +L ACS
Sbjct: 378 QQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHS 437
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
+ G+ + M K P ++ ++D+ GL E+ E +E + D V W
Sbjct: 438 GMLDLGRHIFRSM-KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWC 496
Query: 147 ALLSSFLRHG 156
+LL + HG
Sbjct: 497 SLLKACKMHG 506
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 85/164 (51%), Gaps = 9/164 (5%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
IS+ + L YV +VFDE+ ++ S + + +Y R + F M
Sbjct: 100 ISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAMIAAYARHEHGQEALGFFYEMQD 159
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +TF +L AC+ L E + H ++KGG +S V L+DMY+K G +
Sbjct: 160 VGIQPNHFTFASILPACTDL---EVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEF 216
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ E F ++ +DVV+WNA+++ ++++GL ++A +FQ + + V
Sbjct: 217 ARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDV 260
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + ++ S N+ + Y+++ LF M + TF VL AC+AL
Sbjct: 343 KLFKTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALA 402
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+G + H ++I+ G S+ +V L+ MY+K G + ++ + F + +D + +A++
Sbjct: 403 VLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIV 462
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +G +KE+ +F+ M
Sbjct: 463 GYAINGCSKESLELFEQM 480
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKE 136
T+ +L C + K +HA MI+ + + + + L+ +Y K G L E+ F E
Sbjct: 66 TYDSLLQGCLNAKSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDE 125
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ K+VV+W A+++++ RH +EA G F M
Sbjct: 126 MPVKNVVSWTAMIAAYARHEHGQEALGFFYEM 157
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 12/144 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA +VFD + D +SL++ + Y + + LF M T L
Sbjct: 436 CGSIEDA--------RKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKP 487
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TF VL AC + G+Q +M + P ++ ++D+ + G E+ +
Sbjct: 488 DRVTFVGVLSACCHAGLVDEGRQYFDIMTR-FYHITPAMEHYGCMIDLLGRAGCFDEAND 546
Query: 133 AFKEIEFK-DVVTWNALLSSFLRH 155
++ K D W +LLS+ H
Sbjct: 547 LINKMPIKPDADMWGSLLSACRTH 570
Score = 38.9 bits (89), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD++ D+ S N+ + Y ++ LF + T+ ++ +
Sbjct: 216 FARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKR----DVITWNTMMAGYA 271
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
E ++ M + V ++ Y + G + E+ + F+ + ++V++WNA
Sbjct: 272 QCGDVENAVELFEKM----PEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNA 327
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S F ++G +EA +F+ M
Sbjct: 328 VISGFAQNGQVEEALKLFKTM 348
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N + Y LF M + + A TFT VL ACS L A E+G+++H L+
Sbjct: 376 SWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLI 435
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
++ + VV AL+DMY+K G + E+ FK + +D+V+W ++++++ HG EA
Sbjct: 436 VERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEAL 495
Query: 163 GVFQAMTRERVE 174
+F M + V+
Sbjct: 496 ELFAEMLQSNVK 507
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 28 YTHQVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALF----CYMHSTCLNLTAYTFTPV 82
Y VFD I + ++S N + YTR+ + LF CY CL +YT+ V
Sbjct: 56 YAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCY---PCLKPDSYTYPSV 112
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC L G+ +H ++K G + VV ++L+ MY+K +V+ F E+ KDV
Sbjct: 113 LKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDV 172
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
WN ++S + + G +EA F M R
Sbjct: 173 ACWNTVISCYYQSGKFEEALRYFGMMRR 200
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D++ N+ + Y +S F F M + T T + +C+ L
Sbjct: 162 KLFDEMPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLL 221
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+RG+++H ++ G + V AL+DMY K G L ++E F+++ K VV WN++++
Sbjct: 222 DLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMIN 281
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ G +F+ M E V+
Sbjct: 282 GYGFKGDGISCIQLFKRMYSEGVK 305
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+++ + + + NS + Y + + LF M+S + T T T L ACS
Sbjct: 263 EVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSA 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH +I+ + + ++LMD+Y K G + + FK + V+WN ++S
Sbjct: 323 QLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMIS 382
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ G +A +F M++ VE
Sbjct: 383 GYVTEGKLFDALRLFGEMSKSFVE 406
>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
Length = 647
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
++ S N+ + T++ + FC M + A TF + +CS L A +G+Q+H
Sbjct: 239 NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIH 298
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
AL IK G D V T+L+ MYS+ G LG+S E D+V +A++S++ HG +
Sbjct: 299 ALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQ 358
Query: 160 EAFGVFQAM 168
+A G+F+ M
Sbjct: 359 KAVGLFKQM 367
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 83/191 (43%), Gaps = 19/191 (9%)
Query: 1 MLSFIRMTNFPAKTCISIADALPKRYVYT-----------------HQVFDEISHGDLSS 43
+L++ + +FP T + + +PKR V + ++FDE+ ++++
Sbjct: 84 LLAYADLGDFP--TARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPARNVAT 141
Query: 44 LNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMI 103
N+ + T S + F M + Y + C+ L G+QVHA ++
Sbjct: 142 WNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVV 201
Query: 104 KGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
+ G D + V ++L MY + G L + A + + ++V+ N +S ++G A+ A
Sbjct: 202 RSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAEGALE 261
Query: 164 VFQAMTRERVE 174
F M VE
Sbjct: 262 FFCLMRGAGVE 272
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A++L Y T ++F D+ S N+ + SY +S LF M
Sbjct: 476 VSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVK 535
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ T VL AC+ L + + G+++H + + G +S ++TAL+DMY+K G L
Sbjct: 536 EKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELET 595
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
S + F E +DV+ WN ++S++ HG + A +FQ M ++
Sbjct: 596 SRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIK 640
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+ V+ +CS + A G+ +H IK V +LMDMY K G + + F
Sbjct: 443 SLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRT 502
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+DV++WN L+SS+ + G+ EA +F M +E+V
Sbjct: 503 LQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKV 538
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F EI+ D+ + + + Y ++ MH T AC L A
Sbjct: 196 MFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDA 255
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +H L +K G VVK+ ++ MYS+ G E+ F +++ KD+++W ++++
Sbjct: 256 LVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAV 315
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ GL E +F M +
Sbjct: 316 HSKFGLMSECLHLFWEMQASEI 337
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A ++ ++ +F I D+ NS + S+ + ++ + + M ++ +T
Sbjct: 83 AYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVP 142
Query: 81 PVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
V+ C+ L G +H L K G + ++ + MYSK G + + F EI
Sbjct: 143 MVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITV 202
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KDVVTW AL+ ++++ + M R
Sbjct: 203 KDVVTWTALIVGYVQNNESGRGLKCLFEMHR 233
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
Q H+L+I G + T LM Y+ + S F+ I KD+ WN+++ S +G
Sbjct: 58 QFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNG 117
Query: 157 LAKEAFGVFQAM 168
+ AF + M
Sbjct: 118 DYQRAFDFYLQM 129
>gi|387169573|gb|AFJ66232.1| hypothetical protein 34G24.32 [Capsella rubella]
Length = 598
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 1 MLSFIRMTNFPAKTCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP 58
+L F+ ++ + T I I ++L K Y +V S ++ + N + Y R+ +
Sbjct: 152 LLWFLSLSPGVSNTNI-IIESLMKTGEYGLAKKVLRRASDQNVITWNLMIGGYVRNVQYE 210
Query: 59 ATWALFCYMHS-TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL 117
M S + + ++F L AC+ L K VH+LMI G + ++ +AL
Sbjct: 211 EALKTLKNMLSFSDIKPNKFSFASALAACARLGDLHHAKWVHSLMIDAGIELNTILSSAL 270
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+D+Y+K G + S E F +++ DV WNA+++ F HGLA EA VF M E V
Sbjct: 271 VDVYAKCGDIETSREVFYSVKWNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV 326
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF + D+S N+ + + +F M + ++ + TF +L ACS
Sbjct: 283 SREVFYSVKWNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGILTACSH 342
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E GK+ LM + + +P ++ A++D+ + G + E+ + + + + DVV W
Sbjct: 343 CGLLEEGKEFFGLMSQRFS-IQPKLEHYGAMVDLLGRAGQVKEAYDLIESMPIEPDVVIW 401
Query: 146 NALLSS 151
+LLSS
Sbjct: 402 RSLLSS 407
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A++L Y T ++F D+ S N+ + SY +S LF M
Sbjct: 446 VSVANSLMDMYGKSGHVTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVK 505
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ T VL AC+ L + + G+++H + + G +S ++TAL+DMY+K G L
Sbjct: 506 EKVYPNKVTCIIVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELET 565
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
S + F E +DV+ WN ++S++ HG + A +FQ M ++
Sbjct: 566 SRKLFNSTEERDVILWNVMISNYGMHGHVESAMEIFQLMEESNIK 610
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+ V+ +CS + A G+ +H IK V +LMDMY K G + + F
Sbjct: 413 SLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGHVTATWRIFHRT 472
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+DV++WN L+SS+ + G+ EA +F M +E+V
Sbjct: 473 LQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKV 508
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F EI+ D+ + + + Y ++ MH T AC L A
Sbjct: 166 MFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDA 225
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +H L +K G VVK+ ++ MYS+ G E+ F +++ KD+++W ++++
Sbjct: 226 LVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAV 285
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ GL E +F M +
Sbjct: 286 HSKFGLMSECLHLFWEMQASEI 307
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 1/151 (0%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A ++ ++ +F I D+ NS + S+ + ++ + + M ++ +T
Sbjct: 53 AYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVP 112
Query: 81 PVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
V+ C+ L G +H L K G + ++ + MYSK G + + F EI
Sbjct: 113 MVVSTCAELMMFNHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITV 172
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
KDVVTW AL+ ++++ + M R
Sbjct: 173 KDVVTWTALIVGYVQNNESGRGLKCLFEMHR 203
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H+L+I G + T LM Y+ + S F+ I KD+ WN+++ S +G
Sbjct: 30 HSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGDY 89
Query: 159 KEAFGVFQAM 168
+ AF + M
Sbjct: 90 QRAFDFYLQM 99
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DAL +F+ I+ D+ S NS + + + + T LF M + +
Sbjct: 259 CKHIGDALI--------IFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILP 310
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEP------VVKTALMDMYSKYGL 126
T T VL ACS L A G+++H MI G D E +V A+MDMY+K G
Sbjct: 311 DLVTITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGS 370
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +++ F + KDV +WN ++ + HG A EA G+F M
Sbjct: 371 MNNALKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQM 412
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF E+S D+ N+ + Y + +F MH + + +T T +L ++
Sbjct: 165 QKVFGELSIRDVVLWNAMINGYAKIGCLDEALEVFRRMHVKGVAPSRFTITGILSVFASR 224
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GK VH +++K G DS V AL+DMY K +G+++ F+ I KD+ +WN+++
Sbjct: 225 GDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKDIFSWNSII 284
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S + G +F M
Sbjct: 285 SVHEQCGDHDGTLRLFDKM 303
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKD 141
L +C+ +GKQ+H+LMI G P T+L++MYSK G +GE++ F + ++
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V +NA++S F+ +GLA + F ++ M E V
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGV 109
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ C + K++H ++K G + + V +AL++ Y K G + ++ + F E
Sbjct: 114 YTFPCVVRTCCEVMEV---KKIHGCLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGE 170
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +DVV WNA+++ + + G EA VF+ M
Sbjct: 171 LSIRDVVLWNAMINGYAKIGCLDEALEVFRRM 202
>gi|255588481|ref|XP_002534617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223524904|gb|EEF27768.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 458
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%)
Query: 38 HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQ 97
H + SS NS + +Y F MHS+ + YT++ +L + A + G
Sbjct: 168 HSNSSSWNSVITAYVNRNQAREALEFFTKMHSSDIKKDEYTYSVILSGVAGAAAWKWGML 227
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H IKGG D+ VV +AL+DMYSK G + + F+ + ++++TWNA++S + +G
Sbjct: 228 IHCCAIKGGWDTSVVVGSALIDMYSKCGQVKSAESMFQSLPVRNLITWNAMISGYAHNGN 287
Query: 158 AKEAFGVFQAM 168
+ E F+ M
Sbjct: 288 SYEMIQHFEEM 298
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 65/125 (52%)
Query: 44 LNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMI 103
L + L + +F LF ++ + + AY+FT L AC L + G+ +H ++
Sbjct: 11 LGTLLHKVALTGHFRKALGLFLQLNRSDVCPDAYSFTVALSACGQLSMLQFGRSIHCKIV 70
Query: 104 KGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
K +D VV L+DMY K + E+ F ++ KD+++WN+++++ R+G + A+
Sbjct: 71 KCSSDCGVVVGNCLIDMYGKCASVKEATWVFDKLIDKDIISWNSVIAACARNGRLELAYN 130
Query: 164 VFQAM 168
F M
Sbjct: 131 FFCQM 135
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A+++ Y Q VF +S D+ S ++ + Y + + +M
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ F VL C + E+GKQ+HA ++ G + +V++AL++MYSK G + E
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKE 424
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ + F E E+ ++V+W A+++ + HG ++EA +F+ + +
Sbjct: 425 ASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPK 465
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 71/144 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F+ ++ D+ S + + S + F M T ++ +TF V+ C+
Sbjct: 222 YGLRLFESMTQRDVVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCA 281
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E G+Q+HA +I+ G V ++M MYSK L + F+ + +D+++W+
Sbjct: 282 TLGRIEWGEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWST 341
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++S + + G +EAF M RE
Sbjct: 342 MISGYAQGGCGEEAFDYLSWMRRE 365
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSAL 89
Q+FD++ D S + + Y N +LF M L++ + + L AC
Sbjct: 22 QLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHMDPFILSLALKACGLN 81
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H +K + V +AL+DMY K G + E FKE+ ++VV+W A++
Sbjct: 82 MSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLRNVVSWTAII 141
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ +R G KEA F M ++V
Sbjct: 142 AGLVRAGYNKEALAYFSDMWIQKV 165
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF E+ ++ S + + R+ A F M + YTF+ L AC+ A
Sbjct: 125 VFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGA 184
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+++H +K G + V L MY+K G L + F+ + +DVV+W ++ S
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
++ G + A F+ M V
Sbjct: 245 NVQIGQEENAVKAFRRMRETDV 266
>gi|147864534|emb|CAN78385.1| hypothetical protein VITISV_017238 [Vitis vinifera]
Length = 643
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ D+ S NS L Y + ALF M + + T T +L AC+ L A
Sbjct: 150 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 209
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G +H + + +V TAL+DMY+K G + + + F +E KDV+ WN +++
Sbjct: 210 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 269
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG KEA +F+ M VE
Sbjct: 270 MAIHGHVKEAQQLFKEMKEASVE 292
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 44 LNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMI 103
+NS + Y ++ A LF S C + ++ ++ +RG+ H M+
Sbjct: 38 VNSLIHLYANGKDLGAAKQLF----SLCSDRDVVSWNAMIDG-----YVKRGEMGHTRMV 88
Query: 104 KGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
V+ +++ Y+ G + E+ F E+ +++V+WN++LS F++ G +EAF
Sbjct: 89 FDRMVCRDVISWNTIINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLSGFVKCGNVEEAF 148
Query: 163 GVFQAM 168
G+F M
Sbjct: 149 GLFSEM 154
Score = 43.5 bits (101), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T+ V+ AC+ G VH ++K G + + + +L+ +Y+ LG + + F
Sbjct: 2 TYPFVIKACNESSVTWFGLLVHTHVVKSGFECDSYIVNSLIHLYANGKDLGAAKQLFSLC 61
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+DVV+WNA++ +++ G VF M
Sbjct: 62 SDRDVVSWNAMIDGYVKRGEMGHTRMVFDRMV 93
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F S D+ S N+ + Y + T +F M C ++ ++ ++ + +
Sbjct: 56 QLFSLCSDRDVVSWNAMIDGYVKRGEMGHTRMVFDRM--VCRDVISWN--TIINGYAIVG 111
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ K++ M + V +++ + K G + E+ F E+ +DVV+WN++L+
Sbjct: 112 KIDEAKRLFDEM----PERNLVSWNSMLSGFVKCGNVEEAFGLFSEMPCRDVVSWNSMLA 167
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + G EA +F M
Sbjct: 168 CYAQCGKPNEALALFDQM 185
>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
Length = 843
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ D ++ + S N+ + ++ + F M ++ +T+ +L C+ L
Sbjct: 486 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 545
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GKQ+HA +IK S+ + + L+DMYSK G + + F++ +D VTWNA++
Sbjct: 546 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 605
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HGL +EA +F+ M E V+
Sbjct: 606 GYAQHGLGEEALKIFEYMQLENVK 629
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + D+ S NS + Y + + +F M TF VL +CS+L
Sbjct: 128 QKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSL 187
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G Q+H L +K G D + V +AL+DMY+K L S++ F + K+ V+W+A++
Sbjct: 188 EDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAII 247
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ +++ + +F+ M + V
Sbjct: 248 AGCVQNDDLRGGLELFKEMQKAGV 271
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +++DA ++F+ + + +L S N+ + Y RS L L
Sbjct: 323 CNNLSDA--------QKLFNSLPNHNLQSYNAIIVGYARS--------------DKGLGL 360
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + AC+ + G QVH L +K S V A++DMY K G L E+ F
Sbjct: 361 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 420
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+E+ +D V+WNA++++ ++G ++ +F
Sbjct: 421 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 451
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 58/124 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F + + S ++ + ++ + LF M + ++ TF V +C+ L
Sbjct: 230 QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLS 289
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G Q+H +K ++ V+ TA +DMY K L ++ + F + ++ ++NA++
Sbjct: 290 ALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIV 349
Query: 151 SFLR 154
+ R
Sbjct: 350 GYAR 353
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H +IK + V AL+DMYSK G++ ++ + + + VV+WNA++S F
Sbjct: 452 IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQ 511
Query: 158 AKEAFGVFQAMTRERVE 174
++EA F M V+
Sbjct: 512 SEEAQKTFSKMLEMGVD 528
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 42/96 (43%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF+ + CS A GKQ HA MI V L+ MY K L + + F +
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+D V+WNA+L + G A +F AM V
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDV 139
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F++ + D + N+ + Y + +F YM + TF VL AC +
Sbjct: 588 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 647
Query: 92 PERGKQ-VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
E+G H+++ G D + + ++D+ + G + +++E + + F+ D V W LL
Sbjct: 648 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 707
Query: 150 SSFLRHG----LAKEAFGVFQ 166
S HG K A+ + Q
Sbjct: 708 SICKIHGNVEVAEKAAYSILQ 728
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 84/161 (52%), Gaps = 6/161 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y ++ F++I D S N + + +S +F M+
Sbjct: 551 LSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNR 610
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + +TF + A + + ++GKQ+HA++IK G DS+ V AL+ Y+K G + +
Sbjct: 611 AKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIED 670
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F E+ K+ V+WNA+++ + +HG EA +F+ M +
Sbjct: 671 ARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQ 711
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 72/145 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H + ++ D+ S + + Y + F F M + + F+ + AC+ +
Sbjct: 470 HVILRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGI 529
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +G+Q+HA G + + AL+ +Y++ G + E+ F++I+ KD ++WN L+
Sbjct: 530 QALNQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLI 589
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S F + G ++A VF M R ++E
Sbjct: 590 SGFAQSGYCEDALKVFAQMNRAKLE 614
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 76/145 (52%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +VFD + D S + + ++++ LFC MH+ + T Y F+ VL C
Sbjct: 164 ISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGC 223
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + G+Q+HAL+ K G+ E V AL+ +YS+ + + F +++ KD V++N
Sbjct: 224 TKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFN 283
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
+L+S + G + A +F M R+
Sbjct: 284 SLISGLAQQGFSDGALELFTKMKRD 308
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++F ++ N L ++ + N ++ +F M L +T+ +L C+++
Sbjct: 369 HEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSV 428
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + G+Q+H +IK G V + L+DMY+K+G L + + + DVV+W AL+
Sbjct: 429 GALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALI 488
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +H L EA F+ M ++
Sbjct: 489 SGYAQHNLFAEALKHFKEMLNRGIQ 513
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+V +VF ++ D S NS + + LF M L T +L
Sbjct: 263 NFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLS 322
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++ A +G+Q+H+ +IK G S+ +V+ AL+D+Y + + E F + ++VV
Sbjct: 323 ACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTENVVL 382
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN +L +F + E+F +F+ M
Sbjct: 383 WNVMLVAFGKLDNLSESFRIFRQM 406
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+++ + + S + + + + LF M ++ T +F VL ACS
Sbjct: 66 KVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHR 125
Query: 91 APER-GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
R +Q+HA +I G P++ L+ +Y+K GL+ + + F + KD V+W A++
Sbjct: 126 IGIRYAEQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMI 185
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S F ++G +EA +F M
Sbjct: 186 SGFSQNGYEEEAIHLFCEM 204
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
C N Y + +L C + K++H ++K G +E V+ L+D+Y G L
Sbjct: 7 CANCQTYIW--LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGV 64
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+ F+++ + V +W+ ++S F+ ++ +F M E V
Sbjct: 65 VKVFEDMPNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENV 107
>gi|359479914|ref|XP_002268148.2| PREDICTED: uncharacterized protein LOC100250295 [Vitis vinifera]
Length = 1130
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 28 YTHQVFDEISHGDLSSLNS---------------QLFS----------------YTRSRN 56
+ QVFDEI DL S NS LF+ Y R
Sbjct: 117 FARQVFDEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNVISWSCMINGYVRCGQ 176
Query: 57 FPATWALFCYMHSTCLN---LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV 113
+ ALF M +N +T + VL AC L A E GK HA + K G + V+
Sbjct: 177 YKEALALFREMQMLGVNDVRPNEFTMSGVLAACGRLGALEHGKWAHAYIDKCGMPVDVVL 236
Query: 114 KTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
TAL+DMY+K G + ++ F + KDV+ W+A++S HGLA+E G+F M +
Sbjct: 237 GTALIDMYAKCGSVEKATWVFSNLGPNKDVMAWSAMISGLAMHGLAEECVGLFSKMINQG 296
Query: 173 VE 174
V
Sbjct: 297 VR 298
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 7/159 (4%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSL--NSQLFSYTRSRNFP-----ATWALFCYMHSTCLNL 74
LP R + + SH L S N+ + ++ ++R P + ++F M +
Sbjct: 3 LPTRLISSTHPTLHFSHPTLESFLWNTLIRAHVQARAQPTGPTHSPISIFVRMRFHGVQP 62
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF +L + ++ G+ VHA +++ G +P V+T+L+ MYS G LG + + F
Sbjct: 63 DFHTFPFLLQSFASPSLLHLGRSVHAQILRFGLAIDPFVQTSLISMYSSCGNLGFARQVF 122
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
EI D+ +WN+++++ + GL A +F M V
Sbjct: 123 DEIPQPDLPSWNSIINANFQAGLVDMARNLFAVMPERNV 161
>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
Length = 562
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + H D S S + + T + LF M+ + T+ T VL AC+
Sbjct: 145 KVFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSG 204
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+H+ + G S + +TAL+DMY+K G L S + F +E ++ V+W A+++
Sbjct: 205 ALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIA 264
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ +HG EA +F+ M E
Sbjct: 265 ALAQHGQGDEALELFKEMNLE 285
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESVE 132
A TFT V AC + E+G+++HAL + G S +++ AL++MY + G L E+ +
Sbjct: 86 NAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSSNAILENALLNMYVRCGSLEEARK 145
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F ++ D +W +++++ + EA +F M E +
Sbjct: 146 VFDTMDHPDAFSWTSMITACTENCELLEALELFHRMNLEGI 186
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+++H+ + G + + L+ MY+K G L E+ F I + VV+W+A++ ++
Sbjct: 2 EEGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAY 61
Query: 153 LRHGLAKEAFGVFQAMTRE-RVE 174
HG +EA +F M + RVE
Sbjct: 62 ALHGRGQEALLLFHRMRNDGRVE 84
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 61/92 (66%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T + +L CS L A E+G+Q+HA IK G S+ VV TAL+DMY K G + + +AF +
Sbjct: 295 FTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLD 354
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + +++W ++++SF RHG ++ A +F+ M
Sbjct: 355 MSTRTLISWTSMITSFARHGQSQHALQLFEDM 386
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD + ++ + + Y ++ +F M + + +T + L AC
Sbjct: 32 VNARKVFDNLPRRNVVVWTTLMTGYVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNAC 91
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+L + GKQ HA +IK + + AL +YSK+G L SV+AF+E KDV++W
Sbjct: 92 SSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEKDVISWT 151
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S+ +G A +F M E VE
Sbjct: 152 TIISACGDNGRAGMGLRLFIEMLFENVE 179
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T VL CS + + + G QVH+L K G +S + +L+ +Y K G + E+ F
Sbjct: 183 FTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFNR 242
Query: 137 IEFKDVVTWNALLSSFLR-HGLAKEAFGVFQAMT 169
+E+K+++TWNA+++ + LAK+ F Q T
Sbjct: 243 MEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGT 276
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VHA +IK GT E V + L+++Y+K G++ + + F + ++VV W L++ ++++
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 158 AKEAFGVFQAM 168
+ A VF M
Sbjct: 62 PEVAVEVFGDM 72
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ + N+ + SY +F +L+ M L + T VL ACS L + E G++VH
Sbjct: 833 DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEEGEKVH 892
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ G + + TAL+DMY+K G L +S E F + +DV+TWN ++S + HG A+
Sbjct: 893 NYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDAR 952
Query: 160 EAFGVFQAM 168
A FQ M
Sbjct: 953 SAIEXFQQM 961
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 64 FCYMHSTCLNLTAYTFTPVLG---ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
C MH + F + G AC L A G+ +H L++K G D VV+++L+ M
Sbjct: 552 LCEMHRIGGDGERPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSM 611
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
YSK G E+ +F E+ KD+++W +++S++ R G A E +F M
Sbjct: 612 YSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEM 659
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A + +H MIK D V +L+DMY K G L + F I +D+VTWN L
Sbjct: 782 LGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTL 840
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
+SS+ G EA ++ M E
Sbjct: 841 ISSYAHCGHFAEALSLYDKMVLE 863
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+ F E+ + D+ S S + +Y+R +F M + + + +L + S
Sbjct: 622 HRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNS 681
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K H L+I+ + +V+ AL+ MY K+G L + + F + ++ WN ++
Sbjct: 682 MRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMV 741
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S + + GL + G+F+ M
Sbjct: 742 SGYGKIGLIMKCIGLFREM 760
>gi|302787184|ref|XP_002975362.1| hypothetical protein SELMODRAFT_103065 [Selaginella moellendorffii]
gi|300156936|gb|EFJ23563.1| hypothetical protein SELMODRAFT_103065 [Selaginella moellendorffii]
Length = 661
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 81/154 (52%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA ++F + H D+ + N+ L +Y + LF M +
Sbjct: 134 CGSIHDA--------EEIFFRMEHRDVVAWNAMLSAYAHNGYELEAAKLFQEMEHEGVKA 185
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
F +L ACS L E+GK VH + + G ++E V+ AL+++Y K G L E+ F
Sbjct: 186 DRVVFVSLLEACSKLGDLEQGKVVHGRVTELGFEAEDVLGHALVNLYGKCGALEEARSLF 245
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+I K+VV+WN L++++L++GL ++A +F M
Sbjct: 246 GKIVSKNVVSWNVLITAYLQNGLVEDALKLFTEM 279
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 109 SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S+ + TA+++MY K G + ++ E F +E +DVV WNA+LS++ +G EA +FQ M
Sbjct: 119 SDIFLGTAIVNMYGKCGSIHDAEEIFFRMEHRDVVAWNAMLSAYAHNGYELEAAKLFQEM 178
Query: 169 TRERVE 174
E V+
Sbjct: 179 EHEGVK 184
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + ++ S S + ++ + L MH ++ T ++ AC +L A
Sbjct: 375 VFTGMECKNVISWTSSIVAHATNGQASQAMGLLHQMHLEGVHPNKVTLLGLIDACVSLAA 434
Query: 92 P----ERGKQV--HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF---KDV 142
ER + + L + +S V++TAL++M++K G + E+ F E +D
Sbjct: 435 AVDKNERSIVIPEYVLSVASRFESTIVLETALLNMHAKCGNVEEAERIFFEKMADGERDS 494
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ WNA++S++ +G EA +F M + V
Sbjct: 495 IAWNAMVSAYATNGHGLEAIELFYGMVLQGV 525
Score = 35.8 bits (81), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Query: 33 FDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
F++++ G+ S+ N+ + +Y + + LF M + T+ T T +L CS
Sbjct: 484 FEKMADGERDSIAWNAMVSAYATNGHGLEAIELFYGMVLQGVLPTSVTLTSILSGCSHAG 543
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+G + A M++ G L+D+ + G L E+ + +++ D +TW LL
Sbjct: 544 LVGQGIRYFACMVEDHGVTPTADHMNCLVDLLGRAGWLREAEDLIRKMPAGDPLTWKVLL 603
Query: 150 SSFLRHG 156
+ HG
Sbjct: 604 GACRLHG 610
>gi|2191182|gb|AAB61067.1| similar to N. tabacum membrane-associated salt-inducible protein
(PID:g473874) [Arabidopsis thaliana]
Length = 597
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + S N + SY N+ ++ M S + TFT VL ACS L A
Sbjct: 272 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 331
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GKQ+H + + +++ ++ +AL+DMYSK G E+ F I KDVV+W ++S+
Sbjct: 332 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 391
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG +EA F M +
Sbjct: 392 YGSHGQPREALYQFDEMQK 410
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%)
Query: 42 SSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHAL 101
+S N+ + + +S LF M S+ + + T + ACS L ERGK++H
Sbjct: 107 ASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRK 166
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
+K G + + V +AL+DMY K L + E F+++ K +V WN+++ ++ G +K
Sbjct: 167 CVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSC 226
Query: 162 FGVFQAMTRE 171
+ M E
Sbjct: 227 VEILNRMIIE 236
>gi|302757017|ref|XP_002961932.1| hypothetical protein SELMODRAFT_24361 [Selaginella moellendorffii]
gi|300170591|gb|EFJ37192.1| hypothetical protein SELMODRAFT_24361 [Selaginella moellendorffii]
Length = 282
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V VFD + H +L S N + SY + + M L +TF VL AC
Sbjct: 15 VLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELEGLKPDKFTFISVLHAC 74
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
SA A GK +HAL+ G DS V T L+ MY + E+ F + KD+V W
Sbjct: 75 SASEALAEGKAIHALIAASGFDSSCFVATTLIKMYGCCRCMEEAKAVFDRVASKDIVLWT 134
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
ALL+++ R+ AK A V++ M E +E
Sbjct: 135 ALLTAYSRNEDAKGALLVYRNMDLEGME 162
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD ++ D+ + L +Y+R+ + ++ M + +TF+ ++ C+ A
Sbjct: 121 VFDRVASKDIVLWTALLTAYSRNEDAKGALLVYRNMDLEGMEKNRFTFSSIVSVCADAEA 180
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G++VH + G D + +V T L+D YSK + + F IE KD+V WN +++
Sbjct: 181 LAEGQKVHLHTVSVGYDKDVIVGTTLVDFYSKCHDVDTARSVFDGIEGKDIVPWNVMITG 240
Query: 152 FLRHGLAKEAFGVFQAM 168
F R+G +EA ++Q M
Sbjct: 241 FARNGHGREAVRLYQKM 257
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+L++MY K G L + F + K++V+WN L+ S+ G KEA GV Q M E
Sbjct: 2 NSLVNMYGKGGNLVLAKSVFDSVPHKNLVSWNVLIGSYAGDGDGKEALGVHQKMELE 58
>gi|255558956|ref|XP_002520501.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540343|gb|EEF41914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 383
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 68/142 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H FD + L S N+ + Y +S +L+ M L YTF AC+AL
Sbjct: 63 HMFFDNLMDKSLISWNAMIAGYVQSGLEEIGLSLYYKMRQNGLTPDQYTFASAFRACAAL 122
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GK+ H +MIK VV +AL+DMY K L + +AF + +++VTW +L+
Sbjct: 123 ATLQHGKKAHGVMIKCNLRENVVVNSALIDMYFKCSSLTDGHKAFNKSVNRNIVTWTSLI 182
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S + +HG E F M E
Sbjct: 183 SGYGQHGRVTEVLESFHRMKDE 204
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 42/74 (56%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+++HA M+ G + +K L+ +Y+K G L + F + K +++WNA+++ +++
Sbjct: 27 GRRIHAQMVVVGYVANEYLKNKLLILYAKSGDLKTAHMFFDNLMDKSLISWNAMIAGYVQ 86
Query: 155 HGLAKEAFGVFQAM 168
GL + ++ M
Sbjct: 87 SGLEEIGLSLYYKM 100
>gi|125532999|gb|EAY79564.1| hypothetical protein OsI_34697 [Oryza sativa Indica Group]
Length = 529
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ ++ S NS + Y R ++F ++ ++ TF+ AC+A+
Sbjct: 282 RLFDQMPKKNILSWNSLMEGYVRHGQEAEALSIFQHLIKEGVHPDQITFSSCFRACAAVC 341
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNAL 148
A + G+Q+H +++ G ++ ++L+DMYS+ G L ++ + F E KD + WNAL
Sbjct: 342 ALKCGQQIHGRLLRTGFYPNVMILSSLIDMYSRCGYLADARQVFSLAVQEKKDTLLWNAL 401
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
L + HG +E G F M RER
Sbjct: 402 LGALCHHGHGQEVIGSFVQMIRER 425
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 36 ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH--STCLNLTAYTFTPVLGACSALPAPE 93
+ H DL S N+ L + AL+ + ST L + TF +L C L E
Sbjct: 153 MPHRDLLSYNATLLALAGGGEMQKAVALYSELRGTSTSLGYSDQTFLALLVGCEKLVDRE 212
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-------------- 139
+Q+H +I G S+ + ++L+D+Y+K + ++ + F E+
Sbjct: 213 LARQLHGHLILHGFLSDIRIASSLVDVYTKCVCIADAEDLFNEMPVKSERMWTTLVCGYA 272
Query: 140 -----------------KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K++++WN+L+ ++RHG EA +FQ + +E V
Sbjct: 273 EDGQLSTARRLFDQMPKKNILSWNSLMEGYVRHGQEAEALSIFQHLIKEGV 323
>gi|18854997|gb|AAL79689.1|AC087599_8 hypothetical protein [Oryza sativa Japonica Group]
gi|31433572|gb|AAP55070.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|125575734|gb|EAZ17018.1| hypothetical protein OsJ_32505 [Oryza sativa Japonica Group]
Length = 529
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 2/144 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ ++ S NS + Y R ++F ++ ++ TF+ AC+A+
Sbjct: 282 RLFDQMPKKNILSWNSLMEGYVRHGQEAEALSIFQHLIKEGVHPDQITFSSCFRACAAVC 341
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNAL 148
A + G+Q+H +++ G ++ ++L+DMYS+ G L ++ + F E KD + WNAL
Sbjct: 342 ALKCGQQIHGRLLRTGFYPNVMILSSLIDMYSRCGYLADARQVFSLAVQEKKDTLLWNAL 401
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
L + HG +E G F M RER
Sbjct: 402 LGALCHHGHGQEVIGSFVQMIRER 425
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 33/171 (19%)
Query: 36 ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH--STCLNLTAYTFTPVLGACSALPAPE 93
+ H DL S N+ L + AL+ + ST L + TF +L C L E
Sbjct: 153 MPHRDLLSYNATLLALAGGGEMQKAVALYSELRGTSTSLGYSDQTFLALLVGCEKLVDRE 212
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-------------- 139
+Q+H +I G S+ + ++L+D+Y+K + ++ + F E+
Sbjct: 213 LARQLHGHLILHGFLSDIRIASSLVDVYTKCVCIADAEDLFNEMPVKSERMWTTLVCGYA 272
Query: 140 -----------------KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K++++WN+L+ ++RHG EA +FQ + +E V
Sbjct: 273 EDGQLSTARRLFDQMPKKNILSWNSLMEGYVRHGQEAEALSIFQHLIKEGV 323
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 72/130 (55%)
Query: 39 GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV 98
GD+ + N+ + SY + A +L+ M L + T V+ AC+ L A ERG+++
Sbjct: 490 GDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKI 549
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H+ + + G D + + TAL+DMY+K G LG + F + DVV WN ++S + HG A
Sbjct: 550 HSYVKEMGWDYDVSINTALIDMYAKCGQLGIARRIFDSMLQHDVVAWNVMISGYGMHGEA 609
Query: 159 KEAFGVFQAM 168
K+A +F M
Sbjct: 610 KQALELFGKM 619
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T L AC L G+ +H ++K G P+V +AL MYSK ++ F E+
Sbjct: 222 TMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLEL 281
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDVV+W +L+ + R GL EA +FQ M ++
Sbjct: 282 PEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQ 318
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A + + +CS L G+ H IK D + V L+ MY + G + + F
Sbjct: 424 VADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSVANVLIGMYGRCGKFDHACKIF 483
Query: 135 KEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ K DVVTWN L+SS+ G + A ++ M E
Sbjct: 484 GLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIE 521
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + ++ + +F A + M ++ + +T A + L A G VHA ++
Sbjct: 80 NSLIRTHHCASDFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVR 139
Query: 105 GG---TDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKE 160
G D + V V ++L+ MY++ G + ++V+ F+E+ +DVV W A++S +R+G + E
Sbjct: 140 YGLLVGDGDSVAVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGE 199
Query: 161 AFGVFQAMTR 170
M R
Sbjct: 200 GLRYLVEMVR 209
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ D+ S S + Y R LF M + L + VL
Sbjct: 277 LFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGN 336
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK HA++ K ++ AL+ MY K+ ++ + F+ + +D +WN ++
Sbjct: 337 VHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVG 396
Query: 152 FLRHGLAKEAFGVFQAMT-RERVEF 175
+ + G + +++ M R++ EF
Sbjct: 397 YCKAGCDVKCLELYREMQLRDKYEF 421
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 86/173 (49%), Gaps = 17/173 (9%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
IR+ N A S+ D R FD+I D+ + NS + +Y R+ +F A+
Sbjct: 112 IRLVNLYA----SLGDVSLSR-----GTFDQIQRKDVYTWNSMISAYVRNGHFRE--AID 160
Query: 65 CYMH---STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
C+ T YTF PVL AC L G+++H + K G + V +L+ MY
Sbjct: 161 CFYQLLLVTKFQADFYTFPPVLKACQTLV---DGRKIHCWVFKLGFQWDVFVAASLIHMY 217
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
S++G +G + F ++ F+D+ +WNA++S +++G A +A V M E +
Sbjct: 218 SRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIN 270
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++ D+ S N+ + ++ N + M +N+ + T +L C+ L
Sbjct: 229 LFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGD 288
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+H +IK G + E V AL++MY+K+G LG++ + F+++ +DVV+WN+++++
Sbjct: 289 ISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAA 348
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ ++ A G F M +E
Sbjct: 349 YEQNDDPVTARGFFFKMQLNGLE 371
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF ++ D+ S NS + +Y ++ + F M L T + +
Sbjct: 328 QKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQS 387
Query: 90 PAPERGKQVHALMIKGGTDSEPVV-KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + VH +++ G E VV A+MDMY+K G++ + + F I KDVV+WN L
Sbjct: 388 RDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTL 447
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
+S + ++GLA EA V++ M R
Sbjct: 448 ISGYTQNGLASEAIEVYRMMEECR 471
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTC--LNLTAYTFTPVLGAC 86
H+VF+ I D+ S N+ + YT+ N A+ A+ Y M C + L T+ +L A
Sbjct: 430 HKVFNLIPVKDVVSWNTLISGYTQ--NGLASEAIEVYRMMEECREIKLNQGTWVSILAAY 487
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + A ++G ++H +IK + V T L+D+Y K G L +++ F ++ + V WN
Sbjct: 488 AHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWN 547
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A++S HG ++A +F+ M E V+
Sbjct: 548 AIISCHGIHGHGEKALKLFREMQDEGVK 575
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
K++HAL++ G + L+++Y+ G + S F +I+ KDV TWN+++S+++R+
Sbjct: 93 KRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVRN 152
Query: 156 GLAKEAFGVF 165
G +EA F
Sbjct: 153 GHFREAIDCF 162
>gi|296082168|emb|CBI21173.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E S D S N+ + + NF M + Y+F +L + +
Sbjct: 55 KMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVG 114
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVH++M+K G + +AL+DMY+K + ++ E FK I ++ VTWNAL+S
Sbjct: 115 YVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALIS 174
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ + G AF + M E VE
Sbjct: 175 GYAQVGDRGTAFWLLDCMELEGVEI 199
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 11/164 (6%)
Query: 15 CISIADALPKRYVYTHQVFD---EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
C SI DA +VFD E D S NS L +++S F M S
Sbjct: 249 CGSIEDA--------ERVFDGAIETRDLDHVSWNSILTGFSQSGLSEDALKFFENMRSQY 300
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + Y F+ VL +CS L + G+QVH L++K G + V ++L+ MYSK G++ ++
Sbjct: 301 VVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVIEDAR 360
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++F + WN+L+ + +HG K A +F M RV+
Sbjct: 361 KSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 404
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR-SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF I+ + + N+ + Y + A W L C M + + TF P+L
Sbjct: 156 EVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC-MELEGVEIDDGTFAPLLTLLDDP 214
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK-EIEFKDV--VTWN 146
+ QVHA ++K G S+ V A++ YS+ G + ++ F IE +D+ V+WN
Sbjct: 215 DLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLDHVSWN 274
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
++L+ F + GL+++A F+ M + V
Sbjct: 275 SILTGFSQSGLSEDALKFFENMRSQYV 301
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+ A R H L IK GT + ++ Y+K G + + + F E +D V+WN
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
+++ F+ G + A ++M R
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKR 93
>gi|225457315|ref|XP_002281558.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|297733922|emb|CBI15169.3| unnamed protein product [Vitis vinifera]
Length = 615
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 76/159 (47%), Gaps = 8/159 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
TC S++DA QVFDEI ++ S N+ + Y +R F +F M
Sbjct: 189 TCSSVSDA--------RQVFDEIPDRNIVSWNALITGYNHNRMFRKVIDVFREMQIAGAK 240
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL AC+ L A +G+ + + V TAL+DMY+K G++ E+ +
Sbjct: 241 PVEVTMVGVLLACAHLGALNQGRWIDDYIDHNRLRLNVFVGTALIDMYAKCGVVDEAEKI 300
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
FK + K+V TWN L+S + +G + A F M E+
Sbjct: 301 FKAMRVKNVYTWNVLISGYAMNGRGESALQAFSRMIMEK 339
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 66/129 (51%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D NS + YT S + ++ M + + TF VL + + L E GK +H
Sbjct: 106 DSDLCNSMIRCYTDSNKHLHSVFIYTQMWKNGIFPDSSTFPTVLKSVAQLCRQELGKAIH 165
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+I+ G +S V TAL++MY + ++ + F EI +++V+WNAL++ + + + +
Sbjct: 166 CCIIQMGFESNVYVSTALVNMYGTCSSVSDARQVFDEIPDRNIVSWNALITGYNHNRMFR 225
Query: 160 EAFGVFQAM 168
+ VF+ M
Sbjct: 226 KVIDVFREM 234
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + S N + SY N+ ++ M S + TFT VL ACS L A
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GKQ+H + + +++ ++ +AL+DMYSK G E+ F I KDVV+W ++S+
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG +EA F M +
Sbjct: 486 YGSHGQPREALYQFDEMQK 504
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFDE+ D++S N+ + + +S LF M S+ + + T + ACS L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
ERGK++H +K G + + V +AL+DMY K L + E F+++ K +V WN+++
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ G +K + M E
Sbjct: 283 GYVAKGDSKSCVEILNRMIIE 303
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 24 KRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTP 81
K + VF+ D+ NS + Y+++ F T +F + + + + ++TF
Sbjct: 53 KDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPN 112
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V+ A AL G+ +H L++K G + VV ++L+ MY+K+ L S++ F E+ +D
Sbjct: 113 VIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERD 172
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
V +WN ++S F + G A++A +F M
Sbjct: 173 VASWNTVISCFYQSGEAEKALELFGRM 199
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ L + NS + Y + + + M + T T +L ACS
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV-TWNALL 149
GK +H +I+ +++ V +L+D+Y K G + F + + KDV +WN ++
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ-KDVAESWNVMI 382
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
SS++ G +A V+ M
Sbjct: 383 SSYISVGNWFKAVEVYDQMV 402
>gi|242045336|ref|XP_002460539.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
gi|241923916|gb|EER97060.1| hypothetical protein SORBIDRAFT_02g030160 [Sorghum bicolor]
Length = 630
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 79/144 (54%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDE+ + + + N+ L Y+RS N LF M L T ++ AC+ L
Sbjct: 159 QELFDEMPNRNNVAWNTLLMGYSRSGNANHCLLLFNKMRMAGLTCDDATLCILVDACTEL 218
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
P G +H ++++ G ++ V +L+ +Y+K+ LL ++V F+ +E + +V+WN+L+
Sbjct: 219 ANPSAGSAIHKIVVQSGWNAMAEVSNSLISLYTKFSLLDDAVRIFESMEVQTIVSWNSLI 278
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++++ G ++A +F ++ V
Sbjct: 279 DAYMKLGCVEKATSLFGSVPETNV 302
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF VL AC+ + G+ VH + + G S V +L+DMY+K G L F
Sbjct: 339 FTFGAVLHACATAASLASGRMVHCRVFQSGFVSYLYVANSLIDMYAKCGDLEGGTNVFST 398
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I KD+V+WN +L F +GL EA V+ +M V
Sbjct: 399 IVNKDLVSWNTMLFGFAINGLPNEALVVYDSMKSHDV 435
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 7/134 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D + N+ L +Y R+ ALF S A++ T L A +AL +
Sbjct: 33 VFDAMPRRDAVAWNAMLTAYARAGQPRDALALF----SRAPAPDAFSLTAALSAAAALRS 88
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
P G Q+HA +++ G + V +L+ MY+K ++ AF E+ ++ ++W +LL +
Sbjct: 89 PTAGAQLHARLLRVGLRALLPVGNSLISMYAKCARAEDAARAFGEMRERNALSWCSLLDA 148
Query: 152 FLRHG---LAKEAF 162
++ LA+E F
Sbjct: 149 YVASDDLRLAQELF 162
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY----MHSTCLNLTAYTFTPVLGAC 86
VF I + DL S N+ LF + + N AL Y H C + TFT +L AC
Sbjct: 394 NVFSTIVNKDLVSWNTMLFGF--AINGLPNEALVVYDSMKSHDVCPD--EVTFTGLLTAC 449
Query: 87 SALPAPERGKQVHALMIK-GGTDSEPVVKTALMDMYSKYGLLGESVE 132
S E GK LM+ G +P + ++DMY++ G + +++E
Sbjct: 450 SHSGLLEHGKTFFELMVSVHGIQPKPEHLSCILDMYARSGNITKAME 496
>gi|225454898|ref|XP_002276015.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Vitis vinifera]
Length = 744
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ + N+ + SY +F +L+ M L + T VL ACS L + E G++VH
Sbjct: 466 DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVSVLSACSHLASLEEGEKVH 525
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ G + + TAL+DMY+K G L +S E F + +DV+TWN ++S + HG A+
Sbjct: 526 NYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDAR 585
Query: 160 EAFGVFQAM 168
A FQ M
Sbjct: 586 SAIEFFQQM 594
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG---ACSA 88
VFDEI D+ + + + ++ C MH + F + G AC
Sbjct: 191 VFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQACGN 250
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A G+ +H L++K G D VV++ L+ MYSK G E+ +F E+ KD+++W ++
Sbjct: 251 LGALLEGRCLHGLVVKTGMDYSQVVQSLLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSM 310
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S++ R G A E +F M
Sbjct: 311 ISAYSRMGWATECIDMFWEM 330
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 2/162 (1%)
Query: 10 FPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
F A IS+ + K T ++FDEI H D NS + ++ + + + +M +
Sbjct: 68 FIASKLISLYASFHKPSCST-ELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRA 126
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLG 128
+ +T ++ +C+ L G+ +H L+ K G V ++ + MYSK G+L
Sbjct: 127 SEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGSSAVGSSFVYMYSKCGVLE 186
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E+ F EI F+DVV W AL+ +++G +K M R
Sbjct: 187 EAYGVFDEILFRDVVAWTALVIGCVQNGESKMGLECLCEMHR 228
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S A + +H MIK D V +L+DMY K G L + F I +D+VTWN
Sbjct: 413 SGYGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWN 471
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L+SS+ G EA ++ M E ++
Sbjct: 472 TLISSYAHCGHFAEALSLYDKMVLEDLK 499
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+ F E+ + D+ S S + +Y+R +F M + + + +L + S
Sbjct: 293 HRSFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNS 352
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K H L+I+ + +V+ AL+ MY K+G L + + F + ++ WN ++
Sbjct: 353 MRVFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMV 412
Query: 150 SSFLRHGLAK 159
S + LA+
Sbjct: 413 SGYGATHLAR 422
>gi|125595818|gb|EAZ35598.1| hypothetical protein OsJ_19887 [Oryza sativa Japonica Group]
Length = 495
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
++ S N+ + ++ R+ ALF M + + TF LGAC+ L A + G+ +H
Sbjct: 205 NVVSWNTMMSAFARAGELEEALALFQEMQAAAVRPDDATFVAALGACAQLGALDTGRWLH 264
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A M + G ++ VV AL+DMY+K G + ++ E F + +DV T+ +++ HG +
Sbjct: 265 AYMGRMGHSADGVVGNALLDMYAKCGAVDQATEVFDGMARRDVYTYTSMILGLAMHGRGE 324
Query: 160 EAFGVFQAMTRERV 173
+A +F M R V
Sbjct: 325 DALSLFAGMQRAGV 338
>gi|49387750|dbj|BAD26238.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|218190136|gb|EEC72563.1| hypothetical protein OsI_05996 [Oryza sativa Indica Group]
Length = 803
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 81/157 (51%), Gaps = 1/157 (0%)
Query: 18 IADALPKRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
+A + R V++ + +FD+IS +++ N+ L Y + T LF M +
Sbjct: 358 LASCIKARDVHSARAMFDKISRPSVTTWNTLLSGYCQEEQHQDTIELFRRMQHQNVQPDR 417
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
T +L +CS L + G+QVH+ ++ ++ V + L+DMYSK G +G + F +
Sbjct: 418 TTLAVILSSCSKLGILDFGRQVHSASVRFLLHNDMFVASGLVDMYSKCGQIGIARSIFNK 477
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ +DVV WN+++S H L KEAF F+ M +
Sbjct: 478 MTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGI 514
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 72/137 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F++++ D+ NS + T + F M + T ++ ++ +CS L +
Sbjct: 474 IFNKMTERDVVCWNSIISGLTIHSLNKEAFDFFKQMRENGIMPTESSYASMINSCSRLSS 533
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+Q+HA ++K G D V +AL+DMY+K G + ++ F + K++V WN ++
Sbjct: 534 IPHGRQIHAQVMKDGYDQNVYVGSALIDMYAKCGNMDDARLFFDTMMMKNIVAWNEMIHG 593
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++GL +A +F+ M
Sbjct: 594 YAQNGLGDKAVELFEYM 610
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
++ M + L T +T VL AC L A G++ H + +K G D+ V+ AL+ MY+
Sbjct: 128 MYGRMRAEGLLPTHFTLASVLSACGGLAALGDGRRCHGVAVKVGLDANQFVENALLGMYT 187
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K G +G++V F + + V++ A++ + G +A +F M R V
Sbjct: 188 KCGSVGDAVRLFYGMARPNEVSFTAMMGGLAQTGSIDDALRLFARMCRSGV 238
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 16/168 (9%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA+ R Y +E+S + + ++ + LF M + + +
Sbjct: 189 CGSVGDAV--RLFYGMARPNEVS------FTAMMGGLAQTGSIDDALRLFARMCRSGVPV 240
Query: 75 TAYTFTPVLGACSALPAPER--------GKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
+ + VLGAC+ A + G+ +HAL+++ G S+ V +L+DMY+K
Sbjct: 241 DPVSVSSVLGACAQACATDYSVARAFRLGQAIHALVVRKGFGSDQHVGNSLIDMYTKCVE 300
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ E+V+ F+ + +V+WN L++ F + G +A V M E
Sbjct: 301 MDEAVKVFESLPSVTIVSWNILITGFGQEGSCAKAVEVLSLMQEAGFE 348
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGA 85
V +VFDE+ D+ + L +++++ + LF MH L TF VL A
Sbjct: 215 VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 274
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C L ++GK++H +I G S VV+++L+DMY K G + E+ + F + K+ V+W
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
+ALL + ++G ++A +F+ M
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREM 357
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ +S + S ++ L Y ++ +F M L Y F VL AC+ L
Sbjct: 321 QVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLA 376
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK++H ++ G +V++AL+D+Y K G + + + ++ ++++TWNA+LS
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G +EA F M ++ ++
Sbjct: 437 ALAQNGRGEEAVSFFNDMVKKGIK 460
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
T +VFD D S S + Y + +F M S L+ +T + + ACS
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA---FKEIEFKDVVTW 145
L G+ H ++I G + + + L +Y G+ E V+A F E+ DV+ W
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY---GVNREPVDARRVFDEMPEPDVICW 232
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRER 172
A+LS+F ++ L +EA G+F AM R +
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGK 259
Score = 40.4 bits (93), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG-L 126
HS+ + T + +L C+ + + G Q HA ++K G +++ V +L+ +Y K G
Sbjct: 53 HSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG 112
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ E+ F KD ++W +++S ++ +A VF M
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV 155
>gi|359476188|ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Vitis vinifera]
Length = 829
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E S D S N+ + + NF M + Y+F +L + +
Sbjct: 55 KMFGETSQRDAVSWNTMIAGFVNLGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVG 114
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVH++M+K G + +AL+DMY+K + ++ E FK I ++ VTWNAL+S
Sbjct: 115 YVEVGQQVHSMMVKMGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALIS 174
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ + G AF + M E VE
Sbjct: 175 GYAQVGDRGTAFWLLDCMELEGVEI 199
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 8/168 (4%)
Query: 16 ISIADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
+ I+++L Y+ +H +F+ + + D S NS L +++S F M
Sbjct: 338 VPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENM 397
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
S + + Y F+ VL +CS L + G+QVH L++K G + V ++L+ MYSK G++
Sbjct: 398 RSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLVLKSGFEPNGFVASSLIFMYSKCGVI 457
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ ++F + WN+L+ + +HG K A +F M RV+
Sbjct: 458 EDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 505
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 15 CISIADALPKRYVYTHQVFD-EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C SI DA +VFD I DL + NS L +Y + + LF M
Sbjct: 249 CGSIEDA--------ERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFQLFLEMQVLGFE 300
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY--SKYGLLGESV 131
YT+T V+ A +GK +H L+IK G + + +L+ MY S + E++
Sbjct: 301 PDIYTYTSVISAAFEGSHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEAL 360
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F+ +E KD V+WN++L+ F + GL+++A F+ M + V
Sbjct: 361 NIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYV 402
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 3/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR-SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF I+ + + N+ + Y + A W L C M + + TF P+L
Sbjct: 156 EVFKSINIRNSVTWNALISGYAQVGDRGTAFWLLDC-MELEGVEIDDGTFAPLLTLLDDP 214
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK-EIEFKDVVTWNAL 148
+ QVHA ++K G S+ V A++ YS+ G + ++ F IE +D+VTWN++
Sbjct: 215 DLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSM 274
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
L+++L + +EAF +F M
Sbjct: 275 LAAYLVNNQEEEAFQLFLEM 294
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%)
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+ A R H L IK GT + ++ Y+K G + + + F E +D V+WN
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGETSQRDAVSWN 69
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
+++ F+ G + A ++M R
Sbjct: 70 TMIAGFVNLGNFETALEFLKSMKR 93
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 72/130 (55%)
Query: 39 GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV 98
GD+ + N+ + SY + +L+ M + L + T V+ AC+ L A ERG+++
Sbjct: 489 GDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTPNSTTLITVISACANLVALERGEKI 548
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H+ + + G D + + TAL+DMY+K G LG + F + DVV WN ++S + HG A
Sbjct: 549 HSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEA 608
Query: 159 KEAFGVFQAM 168
K+A +F M
Sbjct: 609 KQALELFGKM 618
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T L AC L G+ +H +K G P+V +AL MYSK ++ F E+
Sbjct: 221 TMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPEL 280
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDVV+W +L+ + GL +EA +FQ M ++
Sbjct: 281 PEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQ 317
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 58/154 (37%), Gaps = 22/154 (14%)
Query: 31 QVFDEISHGDLSSLNSQLFSYT------------RSRNFPATWALFCYMHSTCLNLTAYT 78
+VF + D S N + Y R F T+ C A +
Sbjct: 376 RVFRLLHQRDADSWNLMIVGYCKAGCDVKCLELYREMQFRDTYEFLC---------DANS 426
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +CS L G+ H IK D + V L+ MY + G + + F +
Sbjct: 427 LVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAK 486
Query: 139 FK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
K DVVTWN L+SS+ G + A ++ M E
Sbjct: 487 LKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTE 520
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 95 GKQVHA-------LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
G VHA L + GG+ + P ++L+ MY++ G++ ++V+ F+E+ +DVV W A
Sbjct: 129 GASVHAYCVRYGLLAVDGGSVAVP---SSLVYMYARCGVVRDAVKLFEEMRERDVVAWTA 185
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
++S +R+G + M R
Sbjct: 186 VVSGCVRNGECGDGLRYLVEMVR 208
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
GK HA+++K +V AL+ MY K+ L+ + F+ + +D +WN ++ + +
Sbjct: 339 GKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCK 398
Query: 155 HGLAKEAFGVFQAMT-RERVEF 175
G + +++ M R+ EF
Sbjct: 399 AGCDVKCLELYREMQFRDTYEF 420
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 63/163 (38%), Gaps = 18/163 (11%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI AL Y Q +FD + D+ + N + Y LF M
Sbjct: 561 VSINTALIDMYAKCGQLGTARRIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEG 620
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLL 127
+ TF +L AC E G+Q+ M G EP +K ++D+ K G L
Sbjct: 621 GSIKPNGVTFLAILSACCHSGLLEEGRQLFTRM--GKYSLEPNLKHYACMVDLLGKSGHL 678
Query: 128 GESVEAFKEIEFK-DVVTWNALLSSFLRHG-------LAKEAF 162
E+ + + + D W LLS+ H +AK+AF
Sbjct: 679 QEAEDMVLAMPVEPDGGIWGTLLSACKLHDDFEMGLRIAKKAF 721
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEIS DL S NS + Y++ R+ LF M + VLGAC L
Sbjct: 183 KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELG 242
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G V +++ + +AL+ MY K G L + F ++ KD VTWNA+++
Sbjct: 243 DLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT 302
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++G+++EA +FQ M
Sbjct: 303 GYAQNGMSEEAIKLFQDM 320
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FD + D + N+ + Y ++ LF M + T +L AC
Sbjct: 280 VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++ A + GKQV + G + V TAL+DMY+K G L + F + K+ V+WN
Sbjct: 340 ASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWN 399
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S+ HG A+EA +F++M E
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNE 424
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS L A E G+ H +I+ G D + V +L+ MY++ G +G++ + F EI KD+V+
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN+++S + + A EA G+F+ M
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREM 219
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ + S S + +Y R + LF M S + YT T ++ AC+
Sbjct: 627 EVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 686
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ ++G+ VH+ +IK G S V AL++MY+K G + E+ F +I KD+V+WN ++
Sbjct: 687 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 746
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ ++ L EA +F M ++
Sbjct: 747 GYSQNSLPNEALELFLDMQKQ 767
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +I D+ S N+ + Y+++ LF M T VL AC+ L A
Sbjct: 729 VFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAA 787
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G+++H +++ G S+ V AL+DMY+K GLL + F I KD+++W +++
Sbjct: 788 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 847
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ HG EA F M +E
Sbjct: 848 YGMHGFGNEAISTFNEMRIAGIE 870
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 16 ISIADALPKRYVYTH----------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
ISI +AL + V+ + ++FD+I + + N + Y + NF + +LF
Sbjct: 400 ISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFK 459
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M + YTFT VL +AL + K+VH ++K G S V +L+ Y K+G
Sbjct: 460 KMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFG 519
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + F E+ DVV+WN++++ + +G + +F M
Sbjct: 520 GVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQM 562
Score = 65.9 bits (159), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 68/144 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +FDE+S D+ S NS + + +F M + + T VL A + +
Sbjct: 525 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANI 584
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K E V L+DMYSK G L + E F ++ +V+W + +
Sbjct: 585 GNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTI 644
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++++R GL +A G+F M + V
Sbjct: 645 AAYVREGLYSDAIGLFDEMQSKGV 668
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 23 PKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
P+R H F +H + N+++ + + L S L L +
Sbjct: 312 PRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNS 371
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y VL C+ + E GK+VH+++I G + + L+ MY G L + + F +
Sbjct: 372 YC--SVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDK 429
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I V WN L+S + + G +E+ +F+ M +
Sbjct: 430 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQK 463
>gi|302816163|ref|XP_002989761.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
gi|300142538|gb|EFJ09238.1| hypothetical protein SELMODRAFT_20442 [Selaginella moellendorffii]
Length = 749
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA VFD++ D+ NS + +Y + + L+ M +C+
Sbjct: 315 CGSMGDA--------KMVFDKMPAKDVICWNSMISAYALNGLGKSALDLYARMRHSCVRP 366
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A TF L ACS L + E GK++HA + + +V TAL+ MY K G L S+ F
Sbjct: 367 DAGTFVAALDACSVLNSLEDGKKIHAAISASKLEWNVMVATALVSMYGKCGCLERSIAVF 426
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +E +++++W A+L + +G A +F M E E
Sbjct: 427 RAMEVRNLISWTAMLGALAHNGRDAAALELFARMRDEGRE 466
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VFD ++ S N L +Y + + L M + +
Sbjct: 212 CGSLIDA--------RKVFDRTPDPNIFSWNIMLAAYAHNGHSNEALVLSQRMKDSGATV 263
Query: 75 TA--YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
T+ +L ACS L A G+ +HA +I G +S VV TA+++MY K G +G++
Sbjct: 264 VPDRVTYVILLHACSNLGALREGRMIHASVIVSGMESNVVVATAIVNMYGKCGSMGDAKM 323
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F ++ KDV+ WN+++S++ +GL K A ++ M
Sbjct: 324 VFDKMPAKDVICWNSMISAYALNGLGKSALDLYARM 359
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 3/97 (3%)
Query: 78 TFTPVLGACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
TF VL AC ++ A G+ +H I D++ +V +AL+ MYSK G LG++V F+
Sbjct: 510 TFAAVLEACGSIGTAALGEGRMIHTQAIARACDTDVIVASALIAMYSKCGSLGDAVAIFR 569
Query: 136 EIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E+ K VV +++++ HG + A +F M +
Sbjct: 570 ELSRKRSVVLVTTMIAAYGHHGKLELALELFWEMAQR 606
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++DMY K G LGE+ F IE +V ++N L++S+ GL +EA+ +F AM V
Sbjct: 41 VIDMYGKCGGLGEARAVFDAIEHPNVFSFNILIASYASAGLLEEAWKIFHAMPGRNV 97
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 39/73 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
++ L+ K G D E ++ L+ MY + G L ++ + F ++ +WN +L+++ +
Sbjct: 184 EEAEELIFKTGHDRETRLRNLLIQMYGECGSLIDARKVFDRTPDPNIFSWNIMLAAYAHN 243
Query: 156 GLAKEAFGVFQAM 168
G + EA + Q M
Sbjct: 244 GHSNEALVLSQRM 256
>gi|297724409|ref|NP_001174568.1| Os06g0114366 [Oryza sativa Japonica Group]
gi|218197444|gb|EEC79871.1| hypothetical protein OsI_21372 [Oryza sativa Indica Group]
gi|255676656|dbj|BAH93296.1| Os06g0114366 [Oryza sativa Japonica Group]
Length = 509
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
++ S N+ + ++ R+ ALF M + + TF LGAC+ L A + G+ +H
Sbjct: 219 NVVSWNTMMSAFARAGELEEALALFQEMQAAAVRPDDATFVAALGACAQLGALDTGRWLH 278
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A M + G ++ VV AL+DMY+K G + ++ E F + +DV T+ +++ HG +
Sbjct: 279 AYMGRMGHSADGVVGNALLDMYAKCGAVDQATEVFDGMARRDVYTYTSMILGLAMHGRGE 338
Query: 160 EAFGVFQAMTRERV 173
+A +F M R V
Sbjct: 339 DALSLFAGMQRAGV 352
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFL 153
G++ H + + + V AL+DMY+K G + F+ + K +VV+WN ++S+F
Sbjct: 172 GREAHRRVAERKVAMDVVAWNALVDMYAKCGDAAAAHRWFRRMPVKKNVVSWNTMMSAFA 231
Query: 154 RHGLAKEAFGVFQAM 168
R G +EA +FQ M
Sbjct: 232 RAGELEEALALFQEM 246
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D+ S + + YT+ F LF M + F + AC+ +
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A ++G+Q+HA G + + AL+ +Y++ G + E+ AF +I KD V+WN+L+S
Sbjct: 554 ALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVS 613
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F + G +EA +F M + +E
Sbjct: 614 GFAQSGYFEEALNIFAQMNKAGLE 637
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 72/135 (53%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ + + Y + N ++ +F M + +T+ +L C+ L A + G+Q+H
Sbjct: 402 DIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIH 461
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++K G V + L+DMY+K+G L +++ F+ ++ DVV+W A+++ + +H
Sbjct: 462 TQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFT 521
Query: 160 EAFGVFQAMTRERVE 174
EA +F+ M + ++
Sbjct: 522 EALNLFKEMQDQGIK 536
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 19/161 (11%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y +V FD+I D S NS + + +S F +F M+
Sbjct: 574 LSIGNALVSLYARCGKVREAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNK 633
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L + ++TF + A + + GKQ+H ++ K G DSE V AL+ +Y+K G +
Sbjct: 634 AGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-- 691
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
D ++WN++++ + +HG EA +F+ M +
Sbjct: 692 -----------DDISWNSMITGYSQHGCGFEALKLFEDMKQ 721
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL AC+ + E GKQ+H L++K G SE V AL+ +YS+ G L + + F + +D
Sbjct: 257 VLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRD 316
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMT 169
V++N+L+S + G A +F+ M
Sbjct: 317 RVSYNSLISGLAQQGYINRALALFKKMN 344
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFDE+ LS N ++ R LF M + + F VL CS
Sbjct: 118 NVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAVVLRGCSGNA 177
Query: 91 APER-GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
R +Q+HA I G +S + L+D+Y K G L + + F+ ++ +D V+W A++
Sbjct: 178 VSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMI 237
Query: 150 SSFLRHGLAKEAFGVF 165
S ++G +EA +F
Sbjct: 238 SGLSQNGYEEEAMLLF 253
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F +S D S NS + + ALF M+ C T +L AC+++
Sbjct: 307 QIFHCMSQRDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVG 366
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
A GKQ H+ IK G S+ VV+ +L+D+Y K
Sbjct: 367 ALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVK 399
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
L+D Y +G L +V F E+ + + WN + ++F+ L G+F+ M + VEF
Sbjct: 103 LIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEF 161
>gi|347954486|gb|AEP33743.1| chlororespiratory reduction 21, partial [Lobularia maritima]
Length = 734
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 17 SIADALPKRYVY--THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+AD KR +VFDEI ++ + N+ + Y ++ L M +
Sbjct: 194 SLADMYGKRGFLDDARKVFDEIPERNVVAWNAMMVGYVQNGMNEEAIRLLSDMKEEGIEP 253
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T T + L A + + E GKQ HA+ I G + + ++ T+L++ Y K GL+ + F
Sbjct: 254 TRVTVSMCLSASANIGGIEEGKQSHAVAIVNGLEMDNILGTSLLNFYCKVGLIEYAEMVF 313
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ KDVVTWN L+S +++ GL + A + + M E ++F
Sbjct: 314 DRMIGKDVVTWNLLISGYVQQGLVENAIDMCRLMRVENLKF 354
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 18/148 (12%)
Query: 44 LNSQLFSYTRSRNFPATWAL-----------------FCYMHSTCLNLTAYTFTPVLGAC 86
++ LFS R RN +WA F M T ++ + V AC
Sbjct: 106 ISESLFSRLRIRNV-FSWAAIVGVRSRIGFSEDALTGFVEMLETEISPDNFVVPNVCKAC 164
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
L G+ VH ++K V ++L DMY K G L ++ + F EI ++VV WN
Sbjct: 165 GVLRWSRFGRSVHGFVMKSRLHDCVFVASSLADMYGKRGFLDDARKVFDEIPERNVVAWN 224
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A++ ++++G+ +EA + M E +E
Sbjct: 225 AMMVGYVQNGMNEEAIRLLSDMKEEGIE 252
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 65/146 (44%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T + ++ +
Sbjct: 308 YAEMVFDRMIGKDVVTWNLLISGYVQQGLVENAIDMCRLMRVENLKFDCVTLSTLMSVAA 367
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ + + +DMY++ G + ++ + F KD++ WNA
Sbjct: 368 RTRDLKLGKEVLCYCIRHSFESDIGLASTAVDMYAECGSVVDAKKVFDATVQKDLILWNA 427
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ G + EA +F M + V
Sbjct: 428 LLAAYTESGHSGEALRLFYEMQLQSV 453
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFK- 140
L AC+ L + G +H +I+ S V V T+L+DMY+K G + ++ F +
Sbjct: 534 LSACANLASLHLGTSIHGYIIRNQQHSSSVLVDTSLVDMYAKCGDINKAERVFGSKLYSE 593
Query: 141 -DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ + A++S++ +G KEA +++ + +E
Sbjct: 594 FELPLYGAMISAYALYGKLKEAVTLYRNLEEIGIE 628
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGE 129
L + F +L C GKQ+HA ++K G ++T L+ Y+K L
Sbjct: 47 LRIGPEIFGEILQGCVYDRDLSTGKQIHARVLKNGEFYSRNEYIETKLVVFYAKCDDLEI 106
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S F + ++V +W A++ R G +++A F M
Sbjct: 107 SESLFSRLRIRNVFSWAAIVGVRSRIGFSEDALTGFVEM 145
>gi|255543449|ref|XP_002512787.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547798|gb|EEF49290.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 480
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FDE+ ++ S + + Y +++ + LF M + +T +L AC+ L +
Sbjct: 219 FDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLANVRPNGFTLVGLLRACTELGSL 278
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+++H ++ G + TAL+DMYSK G + ++ + F+E++ K + TWN++++S
Sbjct: 279 ELGRRIHEYALENGFKVGVFLGTALIDMYSKCGSIEDAKKVFEEMQKKSLATWNSMITSL 338
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
HG KEA +F M V
Sbjct: 339 GVHGFGKEALALFAQMEEANV 359
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
++ Y +FD+I + + N + +Y + N L+ M + +TF V+
Sbjct: 78 QKVDYATLIFDQIQNPHTFTWNFMIRAYNYNGNSQQALLLYNLMICEGFSPDKFTFPFVI 137
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL---------------- 127
AC A ++GK+VH IK G + + LMD+Y K G L
Sbjct: 138 KACLDHSALDKGKEVHGFAIKTGFWKDTFLSNTLMDLYFKCGDLDYARKLFDKMAVRSVV 197
Query: 128 ------------GE---SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
GE + AF E+ ++VV+W A+++ ++++ +EAF +FQ M
Sbjct: 198 SWTTFVAGLVACGELDTARAAFDEMPMRNVVSWTAMINGYVKNQRPQEAFELFQRMQLAN 257
Query: 173 V 173
V
Sbjct: 258 V 258
>gi|449527549|ref|XP_004170773.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 487
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ ++ S ++ + +Y+R +F LF M + VL AC+ L A
Sbjct: 199 LFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIVSVLTACAHLGA 258
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+G +H+ + G DS P++ TAL+DMYSK G + ++E F+ I KD WNA++S
Sbjct: 259 ITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISG 318
Query: 152 FLRHGLAKEAFGVFQAM 168
F G ++ +F M
Sbjct: 319 FAMTGNVVKSLELFDKM 335
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA--YTFTPVL 83
+ Y +F + ++ NS + Y SR FP A+ CY+ A YTF P++
Sbjct: 60 FSYACGIFKNLQQRNIFMYNSMIRGYFLSR-FPKQ-AILCYLDLMDRGFLANKYTFPPLI 117
Query: 84 GACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
AC+ + G VHA +I G +++ V +AL++ YS + L V F + KD
Sbjct: 118 KACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARV-LFDKSSGKD 176
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
VV W ++ + + G + A +F M V
Sbjct: 177 VVVWTVMVDGYGKVGDIESARVLFDEMPERNV 208
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ IS+ D + N+ + + + N + LF M ++ T TF +L AC+
Sbjct: 299 EVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAK 358
Query: 91 APERGKQVHALMIKGGTDSEPVVKT--------ALMDMYSKYGLLGESVEAFKEIEFK-- 140
ERG + M PV + ++D+ ++ G++ E E F E +
Sbjct: 359 MVERGLEFFDQMY-------PVYRVQPQFEHYACVVDLMARAGMV-EDAEKFVEEKMGGF 410
Query: 141 ---DVVTWNALLSS 151
D W A+LS+
Sbjct: 411 SNVDANVWGAILSA 424
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEIS DL S NS + Y++ R+ LF M + VLGAC L
Sbjct: 183 KVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREMMEAGFQPNEMSLVSVLGACGELG 242
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G V +++ + +AL+ MY K G L + F ++ KD VTWNA+++
Sbjct: 243 DLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDLVSARRIFDSMKKKDKVTWNAMIT 302
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++G+++EA +FQ M
Sbjct: 303 GYAQNGMSEEAIKLFQDM 320
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FD + D + N+ + Y ++ LF M + T +L AC
Sbjct: 280 VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++ A + GKQV + G + V TAL+DMY+K G L + F + K+ V+WN
Sbjct: 340 ASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWN 399
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S+ HG A+EA +F++M E
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNE 424
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS L A E G+ H +I+ G D + V +L+ MY++ G +G++ + F EI KD+V+
Sbjct: 136 ACSNLLAVENGRMGHCSVIRRGLDEDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVS 195
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN+++S + + A EA G+F+ M
Sbjct: 196 WNSMISGYSKMRHAGEAVGLFREM 219
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VFD ++ D S + +Y S + + M +
Sbjct: 177 CGSVRDA--------RRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRP 228
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T+ VL AC +L A E+GKQ+HA +++ S+ V TAL MY K G ++ E F
Sbjct: 229 SRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAFKDAREVF 288
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + ++DV+ WN ++ F+ G +EA G F M E V
Sbjct: 289 ECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGV 327
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 70/141 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + D+ S + L Y ++ F M + T+ VL ACS
Sbjct: 387 QVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPV 446
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GK++HA ++K G ++ V ALM MY K G + +++ F+ + +DVVTWN L+
Sbjct: 447 ALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIG 506
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++G EA ++ M E
Sbjct: 507 GLGQNGRGLEALQRYEVMKSE 527
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 78/167 (46%), Gaps = 6/167 (3%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
K + I + L K Y + Q+FD+ S+ + S N + Y + LF
Sbjct: 60 KPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTL 119
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M L +TF +L ACS+ G+++H +++ G ++ V AL+ MY+K G
Sbjct: 120 MQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGS 179
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ ++ F + +D V+W L ++ G +E+ + AM +ERV
Sbjct: 180 VRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERV 226
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 58/109 (53%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
Y+H + +Y + +L +C GKQVH +++ G + L+ +Y+ G
Sbjct: 18 YLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCG 77
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ E+ + F + K VV+WN ++S + GLA+EAF +F M +ER+E
Sbjct: 78 SVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLE 126
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ ++ AL K Y+ +VF+ +S+ D+ + N+ + + S F M
Sbjct: 265 VRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLE 324
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ T+T VL AC+ RGK++HA K G S+ AL++MYSK G + +
Sbjct: 325 EGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKD 384
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F + +DVV+W LL + E+F F+ M ++ V+
Sbjct: 385 ARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVK 429
>gi|224071204|ref|XP_002303374.1| predicted protein [Populus trichocarpa]
gi|222840806|gb|EEE78353.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R ++F+++ +L + N+ + Y + LF M + + T + L
Sbjct: 146 RIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMVGFGIQPNSSTLSSALL 205
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
CS L A + G+QVH L+ K + T+L+ MY K G+L + + F ++ +DVVT
Sbjct: 206 GCSELSALQLGRQVHQLVCKSPLCDDTTAGTSLISMYCKCGVLEDGWKLFVQVPRRDVVT 265
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WNA++S + +HG K+A G+F M +
Sbjct: 266 WNAMISGYAQHGEGKKALGLFDEMIEK 292
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 36/58 (62%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
V TA++ Y K G +G + F+++ K++VTWNA+++ ++ + A++ +F+ M
Sbjct: 132 VAWTAMITGYMKLGRIGLAERLFEKMPEKNLVTWNAMIAGYIENHRAEDGVKLFRTMV 189
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ D ++ + S N+ + ++ + F M ++ +T+ +L C+ L
Sbjct: 470 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 529
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GKQ+HA +IK S+ + + L+DMYSK G + + F++ +D VTWNA++
Sbjct: 530 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 589
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HGL +EA +F+ M E V+
Sbjct: 590 GYAQHGLGEEALKIFEYMQLENVK 613
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++Q+F+ + + +L S N+ + Y RS +F + + L L + + AC+
Sbjct: 266 SNQLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAV 325
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ G QVH L +K S V A++DMY K G L E+ F+E+ +D V+WNA+
Sbjct: 326 IKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAI 385
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ ++G ++ +F M + +E
Sbjct: 386 IAAHEQNGNEEKTLSLFVWMLQSGME 411
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +A+A+ Y V VF+E+ D S N+ + ++ ++ N T +LF +M
Sbjct: 348 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 407
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + +T+ VL AC+ A G ++H +IK + V AL+DMYSK G++ +
Sbjct: 408 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEK 467
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + + + VV+WNA++S F ++EA F M V+
Sbjct: 468 AEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVD 512
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 67/158 (42%), Gaps = 25/158 (15%)
Query: 6 RMTNFPAKTCISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA 59
RM K + + + L + Y+ + +VFD + D S N+ LF Y +
Sbjct: 67 RMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGV 126
Query: 60 TWALFCYMHSTCLNLTAY---------------TFTPVLGACSALPAPERGKQVHALMIK 104
LF M T + TF VL +CS+L G Q+H L +K
Sbjct: 127 AQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVK 186
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGE----SVEAFKEIE 138
G D + V +AL+DMY+K + + +E FKE++
Sbjct: 187 MGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQ 224
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVEAFK 135
TF+ + CS A GKQ HA MI T+ +P V L+ MY K LG + + F
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMIL--TEFKPTVFVTNCLIQMYIKCSDLGFAFKVFD 101
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D V+WNA+L + G A +F AM
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAM 134
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F++ + D + N+ + Y + +F YM + TF VL AC +
Sbjct: 572 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 631
Query: 92 PERGKQ-VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
E+G H+++ G D + + ++D+ + G + +++E + + F+ D V W LL
Sbjct: 632 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 691
Query: 150 SSFLRHG----LAKEAFGVFQ 166
S HG K A+ + Q
Sbjct: 692 SXCKIHGNVEVAEKAAYSILQ 712
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD+ D+ S N+ + YTR N + LF M + T ++ +C
Sbjct: 118 QRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQ 177
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+GK +H L +K G D + VK AL+ MY K L F EI K VV+WN ++
Sbjct: 178 QLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMI 237
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+F ++GL EA VF+ M E V
Sbjct: 238 GAFGQNGLFSEAMLVFKQMLEESVN 262
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
CS E Q+ IK G D V TA +D+YSK G + + F + KDVV+W
Sbjct: 74 CSENEKAE-ANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
NAL+S + R G + +AF +F M R +
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFD 161
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ LSS NS + S ++ ALF M + + T +L AC
Sbjct: 417 LFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGN 476
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+ +H +++ D E V TAL+DMY K G + + FK ++ + +WN+L+S
Sbjct: 477 LHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISG 536
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ G A + M + ++
Sbjct: 537 YGLFGFHNHALLCYTEMMEKGIK 559
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G H +K G + +V + MYSK+ + F+E+ K + +WN+++SS +
Sbjct: 379 GLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQ 438
Query: 155 HGLAKEAFGVFQAMT 169
G + +A +F MT
Sbjct: 439 AGRSIDAMALFSQMT 453
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPV 82
R + VF + L+S NS + Y F AL CY M + TF+ +
Sbjct: 511 RMDFAENVFKSMKEPCLASWNSLISGYGL-FGFH-NHALLCYTEMMEKGIKPNKITFSGI 568
Query: 83 LGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK- 140
L AC+ E G++ +M K G E +++ M + GL E++ + +E
Sbjct: 569 LAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNP 628
Query: 141 DVVTWNALLSSFLRH 155
D W ALLS+ H
Sbjct: 629 DSAVWGALLSACCIH 643
>gi|356518302|ref|XP_003527818.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g20540-like [Glycine max]
Length = 535
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 2/165 (1%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
+ +NF + + D L Y +F ++ + ++ S N+ + +YT + P +F
Sbjct: 35 LSQSNFLVTKMLDLCDNL-SHVDYATMIFQQLENPNVFSYNAIIRTYTHNHKHPLAITVF 93
Query: 65 CYMHST-CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
M +T + +TF V+ +C+ L G+QVHA + K G + + + AL+DMY+K
Sbjct: 94 NQMLTTKSASPDKFTFPFVIKSCAGLLCRRLGQQVHAHVCKFGPKTHAITENALIDMYTK 153
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + + + ++E+ +D V+WN+L+S +R G K A VF M
Sbjct: 154 CGDMSGAYQVYEEMTERDAVSWNSLISGHVRLGQMKSAREVFDEM 198
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ + S + + Y R + +F M + + VL AC+ L
Sbjct: 193 EVFDEMPCRTIVSWTTMINGYARGGCYADALGIFREMQVVGIEPDEISVISVLPACAQLG 252
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GK +H K G V AL++MY+K G + E+ F ++ KDV++W+ ++
Sbjct: 253 ALEVGKWIHKYSEKSGFLKNAGVFNALVEMYAKCGCIDEAWGLFNQMIEKDVISWSTMIG 312
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
HG A VF+ M + V
Sbjct: 313 GLANHGKGYAAIRVFEDMQKAGV 335
>gi|218188563|gb|EEC70990.1| hypothetical protein OsI_02646 [Oryza sativa Indica Group]
Length = 952
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 62/91 (68%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF+ VL AC+++ A ERG ++HA ++ +S+ VV++AL+DMYSK G + + + F +
Sbjct: 689 TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKCGRIDYASKVFHSM 748
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+ +WN+++S + RHGL ++A +F+ M
Sbjct: 749 SQKNEFSWNSMISGYARHGLGRKALEIFEEM 779
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 17 SIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMH 68
SI++AL K Y ++F+ +S D+ S NS + S P T ++ F M
Sbjct: 519 SISNALVKMYGECGRMSECWEIFNSMSAHDVVSWNS-IMGVMASSQAPITESVQVFSNMM 577
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ L TF L A + L E GKQ+H++M+K G + V ALM Y+K G +
Sbjct: 578 KSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNALMSCYAKSGDVD 637
Query: 129 ESVEAFKEIEF-KDVVTWNALLSSFLRHGLAKEAF 162
F + +D ++WN+++S ++ +G +EA
Sbjct: 638 SCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAM 672
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF + D S N+ + + ++ A +C M + + + L +C+ L
Sbjct: 438 RVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLG 497
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+Q+H +K G + + AL+ MY + G + E E F + DVV+WN+++
Sbjct: 498 LLAAGQQLHCDAVKWGLYLDTSISNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIM 556
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 10/101 (9%)
Query: 75 TAYTFTPVLGACSALPAPER---GKQVHALMIKGGTDSEPVVKTALMDMYSKYG----LL 127
T++TF VL AC P+R QVH L+ K S V AL+ MY +L
Sbjct: 166 TSFTFGSVLRACQD-SGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGSCSVGPPIL 224
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V F +D++TWNAL+S + + G A F +F+AM
Sbjct: 225 AQRV--FDTTPVRDLITWNALMSVYAKKGDAICTFTLFRAM 263
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Query: 78 TFTPVLGACSALPAPE----RGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVE 132
T+ +L A + E +G++VHA +++ G + V L++MY+K G +G++
Sbjct: 379 TYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIGKACR 438
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
F+ +E +D ++WN ++++ ++G + A
Sbjct: 439 VFQLMEARDRISWNTIITALDQNGYCEAAM 468
Score = 43.5 bits (101), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 82/176 (46%), Gaps = 17/176 (9%)
Query: 4 FIRMTNFPAKTCISIADALPKRY--------VYTHQVFDEISHGDLSSLNSQLFSYTRSR 55
+ T F + T ++ +AL Y + +VFD DL + N+ + Y +
Sbjct: 194 LVSKTEFTSNT--TVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKKG 251
Query: 56 NFPATWALFCYMH----STCLNLTAYTFTPVLGACSALPAPERG--KQVHALMIKGGTDS 109
+ T+ LF M L T +TF ++ A + L + G Q+ ++K G S
Sbjct: 252 DAICTFTLFRAMQYDDSGIELRPTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSGCSS 310
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ V +AL+ ++++G+L E+ + + ++ ++ VT N L++ ++ + A +F
Sbjct: 311 DLYVGSALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIF 366
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
C A P + +H ++K G + + L++ Y+K L + F + ++ V+
Sbjct: 78 GCDASP-----ESLHLEIVKRGLTHDLFLANHLVNSYAKGARLDAARGVFDGMPSRNAVS 132
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
W L+S + GL ++AF +F+AM RE
Sbjct: 133 WTCLISGHVLSGLPEDAFPLFRAMLRE 159
>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
Length = 665
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 80/158 (50%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
++ +A P + +VFD + +L S N+ L Y + LF M + +
Sbjct: 234 AMGNAKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDS 293
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
T VL C L A GK++H ++ + +++ ALMDMY+ G L ++ E F
Sbjct: 294 ITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDL 353
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +DV++W +++S++ +HG +EA +F+ M + +E
Sbjct: 354 MSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLE 391
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YT+ L +CSA G Q+H+ + K D V + + MYS+ G ++ F
Sbjct: 124 YTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDG 183
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
+ +DVV+WNA+++ F R GL A VF+
Sbjct: 184 MPHRDVVSWNAMIAGFARVGLFDRAIEVFK 213
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC---LNLTAYTFTPVLGACS 87
+ FDE+ L + N+ + Y+R+ + ++ M S + A TF+ L ACS
Sbjct: 115 KTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACS 174
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ +G+++ A + G S+ +V+ AL++MYSK G L + + F ++ +DV+ WN
Sbjct: 175 VVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S + + G A +A +FQ M
Sbjct: 235 MISGYAKQGAATQALELFQRM 255
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + D+ + N+ + Y + LF M TF +L AC+ L
Sbjct: 219 KVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSK-YGLLGESVEAFKEIEFKDVVTWNALL 149
E+G+ +H + + G +S+ V+ L++MY+K L E+ + F+ + +DV+TWN L+
Sbjct: 279 DLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILI 338
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+++++G AK+A +F+ M E V
Sbjct: 339 VAYVQYGQAKDALDIFKQMQLENV 362
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + D+ + N + +Y + +F M + T + VL AC+ L
Sbjct: 321 QVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +GK VHAL+ G ++ V++ +LM+MY++ G L ++V F I K +V+W+ L++
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIA 440
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ +HG ++ F + +E
Sbjct: 441 AYAQHGHSRTGLEHFWELLQE 461
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ADAL VF I H + S + ++ R+ ++ + M L
Sbjct: 5 CGSVADALA--------VFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRP 56
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEA 133
F +G CS+ ++G+ +HA++++ + + ++ TAL+ MY++ L + +
Sbjct: 57 DGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKT 116
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F E+ K +VTWNAL++ + R+G + A ++Q M + E
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE 157
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
MY K G + +++ F IE + V+W ++++F R+G +EA G ++ M E
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLE 52
>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 882
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 72/124 (58%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + +++++ FP + + + ++ YTF V+ AC+ L E G V+ +++
Sbjct: 75 NSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILE 134
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G +S+ V AL+DMYS+ GLL + + F E+ +D+V+WN+L+S + HG +EA +
Sbjct: 135 MGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 165 FQAM 168
+ +
Sbjct: 195 YHEL 198
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 81/164 (49%), Gaps = 6/164 (3%)
Query: 16 ISIADALPKRYVYTHQVFDEI----SHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHS 69
+S+++AL Y +V D + S G L ++ N+ + + R +F + M
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ TF L C++L A GK++H +++ G +SE + AL++MYSK G L
Sbjct: 503 NKVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLES 562
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S F+ + +DVVTW ++ ++ +G ++A F M + +
Sbjct: 563 SFRVFERMSRRDVVTWTGMIYAYGMYGEGEKALESFVDMEKSGI 606
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFDE+ DL S NS + Y+ + ++ + ++ + ++T + VL A + L
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANL 220
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
++G+ +H +K G +S VV L+ MY K+ ++ F E+ +D VT+N ++
Sbjct: 221 LVVKQGQGLHGFTLKSGVNSVSVVNNGLLAMYLKFSRPTDARRVFDEMVVRDSVTYNTMI 280
Query: 150 SSFLRHGLAKEAFGVF 165
+L+ + +E+ +F
Sbjct: 281 CGYLKLEMVEESVKMF 296
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY-----TFTPVLG 84
+VFDE+ D + N+ + Y + + +F NL + T T VL
Sbjct: 262 RRVFDEMVVRDSVTYNTMICGYLKLEMVEESVKMFLE------NLDQFKPDILTVTSVLC 315
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC L K ++ M++ G E VK L+D+Y+K G + + + F +E KD V+
Sbjct: 316 ACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILIDVYAKCGDMITARDVFNSMECKDTVS 375
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN+++S +++ G EA +F+ M
Sbjct: 376 WNSIISGYIQSGDLMEAMKLFKMM 399
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ VF+ + D S NS + Y +S + LF M T+ ++
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISLS 418
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L + GK +H+ IK G + V AL+DMY+K G +G+S++ F + D VTWN
Sbjct: 419 TRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIFNSMGTLDTVTWN 478
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
++S+ +R G V M + +V
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKNKV 505
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLR 154
+++HAL+I G D L+D YS + S+ F+ + K+V WN+++ +F +
Sbjct: 24 RRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSIIRAFSK 83
Query: 155 HGLAKEAFGVFQAMTRERV 173
+G +A + + +V
Sbjct: 84 NGWFPKALEFYGKLRESKV 102
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 70/145 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD+ D+ S N+ + YTR N + LF M + T ++ +C
Sbjct: 118 QRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQ 177
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+GK +H L +K G D + VK AL+ MY K L F EI K VV+WN ++
Sbjct: 178 QLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMI 237
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+F ++GL EA VF+ M E V
Sbjct: 238 GAFGQNGLFSEAMLVFKQMLEESVN 262
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
CS E Q+ IK G D V TA +D+YSK G + + F + KDVV+W
Sbjct: 74 CSENEKAE-ANQLQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
NAL+S + R G + +AF +F M R +
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFD 161
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ LSS NS + S ++ ALF M + + T +L AC
Sbjct: 417 LFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLSACCQNGN 476
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+ +H +++ D E V TAL+DMY K G + + FK ++ + +WN+L+S
Sbjct: 477 LHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLASWNSLISG 536
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ G A + M + ++
Sbjct: 537 YGLFGFHNHALLCYTEMMEKGIK 559
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G H +K G + +V + MYSK+ + F+E+ K + +WN+++SS +
Sbjct: 379 GLAFHGYGVKSGLIIDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQ 438
Query: 155 HGLAKEAFGVFQAMT 169
G + +A +F MT
Sbjct: 439 AGRSIDAMALFSQMT 453
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 6/135 (4%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPV 82
R + VF + L+S NS + Y F AL CY M + TF+ +
Sbjct: 511 RMDFAENVFKSMKEPCLASWNSLISGYGL-FGFH-NHALLCYTEMMEKGIKPNKITFSGI 568
Query: 83 LGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK- 140
L AC+ E G++ +M K G E +++ M + GL E++ + +E
Sbjct: 569 LAACTHGGLVEEGRKYFKIMKKKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNP 628
Query: 141 DVVTWNALLSSFLRH 155
D W ALLS+ H
Sbjct: 629 DSAVWGALLSACCIH 643
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ D ++ + S N+ + ++ + F M ++ +T+ +L C+ L
Sbjct: 533 KLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLV 592
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GKQ+HA +IK S+ + + L+DMYSK G + + F++ +D VTWNA++
Sbjct: 593 TVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVC 652
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +HGL +EA +F+ M E V+
Sbjct: 653 GYAQHGLGEEALKIFEYMQLENVK 676
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +++DA ++F+ + + +L S N+ + Y RS +F + + L L
Sbjct: 323 CNNLSDA--------QKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGL 374
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + AC+ + G QVH L +K S V A++DMY K G L E+ F
Sbjct: 375 DEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVF 434
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+E+ +D V+WNA++++ ++G ++ +F M + +E
Sbjct: 435 EEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 474
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I +A+A+ Y V VF+E+ D S N+ + ++ ++ N T +LF +M
Sbjct: 411 ICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQ 470
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + +T+ VL AC+ A G ++H +IK + V AL+DMYSK G++ +
Sbjct: 471 SGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEK 530
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + + + VV+WNA++S F ++EA F M V+
Sbjct: 531 AEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVD 575
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + D+ S NS + Y + + +F M TF VL +CS+L
Sbjct: 128 QKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSL 187
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G Q+H L +K G D + V +AL+DMY+K L S++ F + K+ V+W+A++
Sbjct: 188 EDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAII 247
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ +++ + +F+ M + V
Sbjct: 248 AGCVQNDDLRGGLELFKEMQKAGV 271
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 66/140 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F + + S ++ + ++ + LF M + ++ TF V +C+ L
Sbjct: 230 QFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLS 289
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G Q+H +K ++ V+ TA +DMY K L ++ + F + ++ ++NA++
Sbjct: 290 ALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIV 349
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ R EA G+F+ + +
Sbjct: 350 GYARSDKGIEALGMFRLLQK 369
Score = 43.9 bits (102), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVEAFK 135
TF+ + CS A GKQ HA MI T+ +P V L+ MY K L + + F
Sbjct: 44 TFSHIFQECSDRKALCPGKQAHARMIL--TEFKPTVFVTNCLIQMYIKCSDLEFAFKVFD 101
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ +D V+WNA+L + G A +F AM V
Sbjct: 102 GMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDV 139
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F++ + D + N+ + Y + +F YM + TF VL AC +
Sbjct: 635 IFEKAPNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGL 694
Query: 92 PERGKQ-VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
E+G H+++ G D + + ++D+ + G + +++E + + F+ D V W LL
Sbjct: 695 VEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLL 754
Query: 150 SSFLRHG----LAKEAFGVFQ 166
S HG K A+ + Q
Sbjct: 755 SICKIHGNVEVAEKAAYSILQ 775
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 1/150 (0%)
Query: 19 ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYT 78
AD Y H +FD I L S N + Y ++ ALFC + + ++T
Sbjct: 58 ADPRINNLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLLCDFVP-DSFT 116
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
VL C+ L A + GKQ+H L++K G + V ++L+ MYSK G + + F +E
Sbjct: 117 LPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRME 176
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KDVV+WN+L+ + R G + A +F+ M
Sbjct: 177 DKDVVSWNSLIDGYARCGEIELALEMFEEM 206
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 70/140 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ L + NS + Y R++ F LF M ++ T + A S +
Sbjct: 263 ELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMV 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+ VH+ ++K G ++ V+ T L++MYSK G + ++ F+ I K + W +++
Sbjct: 323 SLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGHWTSVIV 382
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
HGL ++ +F M R
Sbjct: 383 GLGMHGLVEQTLELFDEMCR 402
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S NS + Y R +F M ++++T ++ S
Sbjct: 170 KVFDRMEDKDVVSWNSLIDGYARCGEIELALEMFEEMPEK----DSFSWTILIDGLSKSG 225
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E + V M V A+++ Y K G + E F ++ + +VTWN++++
Sbjct: 226 KLEAARDVFDRM----PIRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMIT 281
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ R+ +A +F+ M RE +
Sbjct: 282 GYERNKQFTKALKLFEVMLREDI 304
>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
Length = 655
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD I + DL+S N+ + + + + +L+ M L +TFT VL ACS L A
Sbjct: 239 VFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGA 298
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK++H + G ++ TAL++MY+K G E+ F + K+V TW +L+S+
Sbjct: 299 LTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSA 358
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ + G ++ +Q M E V
Sbjct: 359 YSQPGQSQYRLEAYQRMNCEGV 380
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+++ +L S S + +YT + + L+ M S + Y + L C P
Sbjct: 142 VFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVC---PT 198
Query: 92 PERGKQVHALMIKGGTDSE--PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K G PV AL+ MY ++G + + F I +KD+ ++N ++
Sbjct: 199 IREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMI 255
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F ++ +A ++ M +E
Sbjct: 256 AVFAKYDDGSKAISLYIEMEGRNLE 280
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA+ F EI+ + S + +Y + LF + L
Sbjct: 30 CKSIDDAVA--------AFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQQ 81
Query: 75 TAYTFTPVLGACSALPAP--ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
T+ VL +C+ L E GK++H I G ++ VV+ +L+ MY+K G +
Sbjct: 82 NQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAG 141
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F+++E K+++++ +++ ++ EA+ +++ M E +
Sbjct: 142 VFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGI 182
>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
Length = 588
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + L YT+ LF +++ + TFT +L A S L
Sbjct: 172 RVFDMLPARDVVSYTAILSGYTQLGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLS 231
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GKQVH L+++ ++ +L+DMYSK G L S F + + VV+WNA+L
Sbjct: 232 SMDYGKQVHGLILRRELPFFMALQNSLIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLM 291
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ RHGLA E +F++M E
Sbjct: 292 GYGRHGLAHEVVQLFRSMCDE 312
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 20/144 (13%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
V D + ++ S + + Y+++ W LF M ++
Sbjct: 91 NVLDGMPERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQV--------------- 135
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
KQVHA +K + V ++L+DMY+K + E+ F + +DVV++ A+LS
Sbjct: 136 -----KQVHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILS 190
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + GL +EA +F+ + E ++
Sbjct: 191 GYTQLGLDEEALDLFRLLYNEGMQ 214
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 47/94 (50%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ + + C A G+QVHA M+ G + T L+ MY++ G L ++
Sbjct: 36 HDYDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDG 95
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ ++VV+W A++S + ++ +A+ +F M R
Sbjct: 96 MPERNVVSWTAMISGYSQNERPDQAWELFIMMLR 129
>gi|449469438|ref|XP_004152427.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cucumis sativus]
Length = 528
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE+ ++ S ++ + +Y+R +F LF M + VL AC+ L A
Sbjct: 199 LFDEMPERNVISWSAMMAAYSRVSDFREVLCLFRQMQKKNIVPNDSVIASVLTACAHLGA 258
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+G +H+ + G DS P++ TAL+DMYSK G + ++E F+ I KD WNA++S
Sbjct: 259 ITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEVFEGISNKDAGAWNAMISG 318
Query: 152 FLRHGLAKEAFGVFQAM 168
F G ++ +F M
Sbjct: 319 FAMTGNVVKSLELFDKM 335
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA--YTFTPVL 83
+ Y +F + ++ NS + Y SR FP A+ CY+ A YTF P++
Sbjct: 60 FSYACGIFKNLQQRNIFMYNSMIRGYFLSR-FPKQ-AILCYLDLMDRGFLANKYTFPPLI 117
Query: 84 GACSAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
AC+ + G VHA +I G +++ V +AL++ YS + L V F + KD
Sbjct: 118 KACALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARV-LFDKSSGKD 176
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
VV W ++ + + G + A +F M V
Sbjct: 177 VVVWTVMVDGYGKVGDIESARVLFDEMPERNV 208
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 21/134 (15%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ IS+ D + N+ + + + N + LF M ++ T TF +L AC+
Sbjct: 299 EVFEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAK 358
Query: 91 APERGKQVHALMIKGGTDSEPVVKT--------ALMDMYSKYGLLGESVEAFKEIEFK-- 140
ERG + M PV + ++D+ ++ G++ E E F E +
Sbjct: 359 MVERGLEFFDQMY-------PVYRVQPQFEHYACVVDLMARAGMV-EDAEKFVEEKMGGF 410
Query: 141 ---DVVTWNALLSS 151
D W A+LS+
Sbjct: 411 SNVDANVWGAILSA 424
>gi|356504050|ref|XP_003520812.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Glycine max]
Length = 753
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFDE+ ++ + + + ++ + LF M ++ + T+ L ACS L
Sbjct: 44 QVFDEMLERNVVTWTAVISGLAQNEFYEDGLRLFDQMRRGSVSPNSLTYLSALMACSGLQ 103
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+++H L+ K G S+ +++ALMD+YSK G L E+ E F+ E D V+ +L
Sbjct: 104 ALLEGRKIHGLLWKLGMQSDLCIESALMDLYSKCGSLEEAWEIFESAEELDDVSLTVILV 163
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+F+++GL +EA +F M + +E
Sbjct: 164 AFMQNGLEEEAIQIFMRMVKLGIE 187
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ D SL L ++ ++ +F M + + + +LG
Sbjct: 145 EIFESAEELDDVSLTVILVAFMQNGLEEEAIQIFMRMVKLGIEVDPNMVSAILGVFGVGT 204
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQ+H+L+IK V L++MYSK G L +S++ F E+ K+ V+WN++++
Sbjct: 205 SLTLGKQIHSLIIKKNFIQNLFVSNGLINMYSKCGDLYDSLQVFHEMTQKNSVSWNSVIA 264
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ R+G + F Q RVE
Sbjct: 265 AYARYG---DGFRALQFYDDMRVE 285
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
MYSK G L ++++ F + KD V+WNA++S FLR+ VF M V
Sbjct: 1 MYSKCGKLQDAIKLFDHMPVKDTVSWNAIISGFLRNRDCDTGRQVFDEMLERNV 54
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF E++ + S NS + +Y R + + M + LT TF +L ACS
Sbjct: 246 QVFHEMTQKNSVSWNSVIAAYARYGDGFRALQFYDDMRVEGIALTDVTFLSLLHACSHAG 305
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNAL 148
E+G + M + G ++DM + GLL E+ + + + E V+ W AL
Sbjct: 306 LVEKGMEFLESMTRDHGLSPRSEHYACVVDMLGRAGLLKEAKKFIEGLPENPGVLVWQAL 365
Query: 149 LSSFLRHG 156
L + HG
Sbjct: 366 LGACSIHG 373
>gi|242038427|ref|XP_002466608.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
gi|241920462|gb|EER93606.1| hypothetical protein SORBIDRAFT_01g010975 [Sorghum bicolor]
Length = 752
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 77/149 (51%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+ V ++F ++ + +S N+ + Y +R F FC M ++ T + VL
Sbjct: 465 KMVEAEELFKKMPARNAASWNTMISGYAENRRFGDALNYFCAMLASGQIPGEITLSSVLL 524
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ L + E GK VHA ++K G + + TAL DMY+K G L S F ++ K+ +T
Sbjct: 525 ACANLCSLEMGKMVHAEIVKLGIEDNIFMGTALSDMYAKSGDLDSSRRMFYQMPEKNNIT 584
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
W A++ +G A+E+ +F+ M R+
Sbjct: 585 WTAMVQGLAENGFAEESILLFENMIANRI 613
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F+ VL AC+ L G ++HA +K G S V ++L+DMY K ++ F +
Sbjct: 387 FSSVLSACATLHDLRGGTRIHANALKMGFSSSLFVSSSLIDMYCKCKQCTDAQRIFNSLP 446
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+ V WN+L+S + +G EA +F+ M
Sbjct: 447 EKNTVCWNSLISGYSWNGKMVEAEELFKKM 476
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 7/171 (4%)
Query: 10 FPAKTCIS---IADALPKRYVYTHQV--FDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
P K+ +S + DAL KR V ++ ++ + + + R+ + +F
Sbjct: 180 MPEKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGFVRNELHKDAFPVF 239
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSK 123
M + T V+ AC + V L IK + + V +L+ +Y +
Sbjct: 240 RKMLRCSVRPNVVTLICVIKACVGAGEFDLAMGVVGLAIKWNLFEKSIEVHNSLITLYLR 299
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G + F ++E +DVV+W ALL + G + A V AM ER E
Sbjct: 300 MGDAAAAHRVFDDMEVRDVVSWTALLDVYAELGDLEGARRVLDAMP-ERNE 349
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
+ G + V T ++D K G + ++V+ ++ V + A+++ F+R+ L K+A
Sbjct: 176 LFDGMPEKSVVSYTTMVDALMKRGSVKDAVKLYERCPLYSVAFFTAMIAGFVRNELHKDA 235
Query: 162 FGVFQAMTR 170
F VF+ M R
Sbjct: 236 FPVFRKMLR 244
>gi|410109961|gb|AFV61060.1| pentatricopeptide repeat-containing protein 81, partial [Aloysia
barbata]
Length = 374
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 8/164 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F+ + DL S N+ L +++ JF +
Sbjct: 193 ISNALXSMYLKSNXRNVEDALKIFEHXNXKDLVSWNTILIGLSQNGLSENALXJFXNIXL 252
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+ L++K G + V +AL+ MYSK G++ +
Sbjct: 253 DHLVXDQYTFAAVLRSCSDLATLXLGRQIXVLVVKSGFEGNXYVASALIFMYSKCGIIED 312
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ E+F+ K VTWN+++ ++ HG K A +F MT R+
Sbjct: 313 ARESFESSLKKTSVTWNSIIFAYAXHGQGKXALDLFYLMTERRI 356
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 3/138 (2%)
Query: 31 QVFDE-ISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL + NS L +Y + +F M + AYT + V+ AC
Sbjct: 110 RVFDSSXGYRDLVTWNSMLAAYLEHNLEEYGFNIFLEMVKQRXEMDAYTLSSVISACFED 169
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWNA 147
GK +H +IK G D + AL MY K + ++++ F+ KD+V+WN
Sbjct: 170 XQQSLGKSLHXXVIKKGLDZVTQISNALXSMYLKSNXRNVEDALKIFEHXNXKDLVSWNT 229
Query: 148 LLSSFLRHGLAKEAFGVF 165
+L ++GL++ A +F
Sbjct: 230 ILIGLSQNGLSENALXJF 247
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N LF M + + TF P+L
Sbjct: 2 RRVEDANKVFKYMGERNAVSWNALIGGYAEMGNLERCVTLFVGMEMEGVRVDDATFAPLL 61
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDV 142
+Q H ++K + E V A + Y++ G + ++ F ++D+
Sbjct: 62 TLLXDAEXYXLTRQXHGKIMKRXLEYENTVLNATITAYAECGCIEDAKRVFDSSXGYRDL 121
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN++L+++L H L + F +F M ++R E
Sbjct: 122 VTWNSMLAAYLEHNLEEYGFNIFLEMVKQRXEM 154
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ D+ S NS L Y + ALF M + + T T +L AC+ L A
Sbjct: 345 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 404
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G +H + + +V TAL+DMY+K G + + + F +E KDV+ WN +++
Sbjct: 405 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 464
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG KEA +F+ M VE
Sbjct: 465 MAIHGNVKEAQQLFKEMKEAGVE 487
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
P Y +F + + S NS + + + S+ L+ M + L T+ V
Sbjct: 142 PTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFV 201
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+ AC+ G VH ++K G + + + ++L+ +Y+ LG + + F +DV
Sbjct: 202 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDV 261
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMT 169
V+WNA++ +++H A VF M
Sbjct: 262 VSWNAMIDGYVKHVEMGHARMVFDRMV 288
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 35/54 (64%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ Y+ G + E+ F E+ +++V+WN++L+ F++ G ++AFG+F M
Sbjct: 296 NTMINGYAIVGKIDEAKRLFDEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEM 349
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D N L Y +S +F FC M ++ + + T+T +L C+
Sbjct: 168 RVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRTSYSMVNSVTYTCILSICATRG 227
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H L+I G + +P V L+ MYSK G L + + F + D VTWN L++
Sbjct: 228 NFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTDTVTWNGLIA 287
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++++G EA +F AM V+
Sbjct: 288 GYVQNGFTDEAAPLFNAMISAGVK 311
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL AC+A+ A + GK++H ++K ++ V +A+ DMY+K G L + E F+ +
Sbjct: 417 TMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITDMYAKCGRLDLAYEFFRRM 476
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+D V WN+++SSF ++G + A +F+ M +F
Sbjct: 477 SDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKF 514
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
+I D K R ++ F +S D NS + S++++ LF M +
Sbjct: 455 AITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKF 514
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + + L A + LPA GK++H +I+ S+ V + L+DMYSK G L + F
Sbjct: 515 DSVSLSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVF 574
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ K+ V+WN++++++ HG +E ++ M R +
Sbjct: 575 NLMDGKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIH 614
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 69/145 (47%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+Y ++F+ + D + N + Y ++ LF M S + + TF L +
Sbjct: 265 LYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSI 324
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ K+VH+ +++ + +K+AL+D+Y K G + + + F++ DV
Sbjct: 325 LESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCT 384
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++S ++ HGL +A F+ + +E
Sbjct: 385 AMISGYVLHGLNIDAINTFRWLIQE 409
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF V+ AC L VH G + +AL+ +Y+ G + ++ F E
Sbjct: 113 YTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVDLFAGSALIKLYADNGYIRDARRVFDE 172
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D + WN +L +++ G A G F M
Sbjct: 173 LPLRDTILWNVMLRGYVKSGDFDNAIGTFCEM 204
>gi|357480561|ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511621|gb|AES92763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 598
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 9/153 (5%)
Query: 28 YTHQVFDEISHGD-----LSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
Y H++FD + + S + + L +T R+ +T+A+ MH + + +TF+ V
Sbjct: 65 YAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAI---MHQKGILPSGFTFSSV 121
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC +PA GKQVHA +++ G +V+TAL+DMY+K G + ++ + F + +DV
Sbjct: 122 LNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDGMVDRDV 181
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
V W A++ + + G +A +F M ER F
Sbjct: 182 VAWTAMICGYAKAGRMVDARLLFDNMG-ERNSF 213
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + + DL + ++ + ++ LF M L TF VL ACS
Sbjct: 368 FNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLI 427
Query: 93 ERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
E G + +M G + P T ++D+ + G L ++ KE D TW +LL+
Sbjct: 428 EEGCRFFQIMTGVYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLA 487
Query: 151 SFLRHG 156
+ +G
Sbjct: 488 ACRVYG 493
>gi|297827565|ref|XP_002881665.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327504|gb|EFH57924.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 836
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 80/159 (50%), Gaps = 6/159 (3%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
IS+A +L Y Q+F +I D+ S ++ + S+ ++ +LF M
Sbjct: 335 ISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIASFEQAGQHDEALSLFRDMMR 394
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
T A T T VL C+ + A GK +H IK +SE TA++ MY+K GL
Sbjct: 395 THFKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADVESELETATAVISMYAKCGLFSP 454
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++AF+ + KD + +NAL + + G A +AF V++ M
Sbjct: 455 TLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNM 493
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 19 ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAY 77
A +L +R + ++ D + + + NS + YTR+ +F YM + ++ Y
Sbjct: 42 AYSLFQRPDLSRKIVDSVPYPGVVLWNSMIRGYTRAGLHKEALEVFGYMSEAKGIDPDKY 101
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TFT L AC+ E G ++H L+ + G +S+ + TAL++MY K G L + + F ++
Sbjct: 102 TFTFALKACAGSMDFEEGLRIHDLIAEMGFESDVYIGTALVEMYCKAGDLVSARQVFDKM 161
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KD+VTWN ++S ++G + EA +F+ M
Sbjct: 162 PVKDIVTWNTMVSGLAQNGCSSEALRLFRDM 192
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 75/139 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+ D SS + + +Y + +F LF M + + + L A + +
Sbjct: 256 VFEEVFSKDESSWGTMMAAYAHNGSFEEVLELFDVMRNYDVRMNKVAAASALQAAAYVGN 315
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G +H ++ G S+ V T+L++MYSK G L + + F +I+ +DVV+W+A+++S
Sbjct: 316 LEKGIAIHEYTVQQGMMSDISVATSLINMYSKCGELELAEQLFIKIKDRDVVSWSAMIAS 375
Query: 152 FLRHGLAKEAFGVFQAMTR 170
F + G EA +F+ M R
Sbjct: 376 FEQAGQHDEALSLFRDMMR 394
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--HSTCLNLTAYTFTPVLGAC 86
T + F+ + D + N+ YT+ + + ++ M H C + + T +L C
Sbjct: 455 TLKAFERLPIKDAIAFNALAQGYTQIGDASKAFDVYKNMKLHGVCPD--SGTMVGMLQTC 512
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTW 145
+ RG V+ +IK G DSE V AL+DM++K L + F + F K V+W
Sbjct: 513 ALCSDYARGSCVYGQIIKHGFDSECHVAHALIDMFTKCDALAAAKSLFDKCGFEKSTVSW 572
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
N +++ +L HG A+EA F+ M E+ +
Sbjct: 573 NIMMNGYLLHGQAEEAIATFRQMKVEKFQ 601
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A TF ++ A + L A G VH+ +I+ G S V +L+DMY+K G++ S + F
Sbjct: 603 NAVTFVNIVRAAAELAALSLGMSVHSSLIQFGFCSHTPVGNSLVDMYAKCGMIESSKKCF 662
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
EI K++V+WN +LS++ HGLA A +F +M ++
Sbjct: 663 IEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELK 702
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 69/142 (48%), Gaps = 2/142 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V QVFD++ D+ + N+ + ++ LF MHS+ +++ + ++ A
Sbjct: 152 VSARQVFDKMPVKDIVTWNTMVSGLAQNGCSSEALRLFRDMHSSFVDIDHVSLYNLIPAV 211
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S L + + +H L+IK G S + L+DMY K L + F+E+ KD +W
Sbjct: 212 SKLEKNDVCRCLHGLVIKKGFTS--AFSSGLIDMYCKCADLYAAECVFEEVFSKDESSWG 269
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+++++ +G +E +F M
Sbjct: 270 TMMAAYAHNGSFEEVLELFDVM 291
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 56/129 (43%), Gaps = 2/129 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ + F EI + ++ S N+ L +Y +LF M L + +F VL AC
Sbjct: 658 SKKCFIEIRNKNMVSWNTMLSAYAAHGLANCAVSLFLSMQENELKPDSVSFLSVLSACRH 717
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
E GK++ M + V A M D+ K GL E+VE + + K V W
Sbjct: 718 AGLAEEGKRIFKEMEERHKIEAKVEHYACMVDLLGKSGLFDEAVEMVRRMRVKASVGVWG 777
Query: 147 ALLSSFLRH 155
ALL+S H
Sbjct: 778 ALLNSSRMH 786
>gi|255576918|ref|XP_002529344.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531164|gb|EEF33011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 506
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ ++ +L Y + +VFD + ++ + NS + Y ++ + +F M
Sbjct: 57 CVFVSSSLIDMYGKCGILMDARKVFDAMRQKNVVTWNSMIMGYVQNGLYLEAIKVFANMR 116
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ + T L A + L A GKQ HA+ +KGG + + ++ +++++ YSK GL+
Sbjct: 117 LEDIEYSRVTLLGFLSAAANLGAVTEGKQGHAIAVKGGYELDNILGSSILNFYSKVGLIE 176
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ F + KDVVTWN L+SS+L+ L ++A + M + ++F
Sbjct: 177 DAELVFSNMAEKDVVTWNLLISSYLQCELVEKALNMCHLMRFQNMKF 223
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC AL GK VH ++K G D V ++L+DMY K G+L ++ + F + K+V
Sbjct: 30 LKACGALYWIRFGKGVHGYVVKMGLDGCVFVSSSLIDMYGKCGILMDARKVFDAMRQKNV 89
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VTWN+++ ++++GL EA VF M E +E+
Sbjct: 90 VTWNSMIMGYVQNGLYLEAIKVFANMRLEDIEY 122
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF ++ D+ + N + SY + + M + + T +L AC+
Sbjct: 181 VFSNMAEKDVVTWNLLISSYLQCELVEKALNMCHLMRFQNMKFDSVTLDSILSACANTKN 240
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK+ H I+ +S+ V A+++MY+K G + ++ E F KD+ WN LL++
Sbjct: 241 IQLGKEAHCYCIRNNLESDVDVANAIVNMYAKCGSIHDAKEVFNSTMNKDLTLWNMLLTA 300
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ + GL E +F M E V
Sbjct: 301 YAQLGLVGETLRLFYQMQLESV 322
>gi|302789718|ref|XP_002976627.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
gi|300155665|gb|EFJ22296.1| hypothetical protein SELMODRAFT_105356 [Selaginella moellendorffii]
Length = 734
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 81/144 (56%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ ++ S L +Y ++ ++ L M + + TF +LGACS L
Sbjct: 59 EIFDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGIRPNSVTFLWILGACSNLG 118
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+++HA M+ G D++ VV TA++ MYSK LG++ + F + KDVV+W A+++
Sbjct: 119 DVETGRKIHARMVFLGWDTDTVVSTAILGMYSKCEKLGDAKKIFDSLRRKDVVSWTAIIT 178
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+F + G + A +F M + V+
Sbjct: 179 AFSQLGRPRVALELFWEMDLDGVK 202
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 77/142 (54%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F ++S ++ N+ + Y + ++ L+ M+ L YTF+ VLGACS
Sbjct: 361 FTKMSSSNVVVWNALIAGYVQGEHWQEALDLYHAMNLEGLEADIYTFSSVLGACSGAKDL 420
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G+ VHA ++ G + ++ L++M++K G L ++E F+ + ++ V+WN+++++F
Sbjct: 421 SEGRAVHARIVSRGLEVVVPLQNGLVNMFAKCGSLTLALEMFRGMASRNTVSWNSMVTAF 480
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+HG AF +F+ M E E
Sbjct: 481 CQHGDGGGAFELFKEMLLEGGE 502
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V FD + S N+ + +Y + + +L+ M +T +LGAC
Sbjct: 257 VEAKAAFDHLREKSTGSWNAIVRAYIQHGHISQALSLYKEMDVHGAEPDTFTHVCLLGAC 316
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+L A E G+++HA M G + + +A++ MY+K G + ++ AF ++ +VV WN
Sbjct: 317 SSLGALEEGERIHARM---GDKPDGLAGSAIVAMYAKCGGIEHAMTAFTKMSSSNVVVWN 373
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AL++ +++ +EA ++ AM E +E
Sbjct: 374 ALIAGYVQGEHWQEALDLYHAMNLEGLE 401
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 70/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D+ S + + ++++ LF M + TF +L AC+ +
Sbjct: 160 KIFDSLRRKDVVSWTAIITAFSQLGRPRVALELFWEMDLDGVKPNESTFVNILAACTYMD 219
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G +++ I G ++ V + + MYS++G L E+ AF + K +WNA++
Sbjct: 220 ALEDGDKLYKRAISCGYGADVFVGSTAVTMYSRFGNLVEAKAAFDHLREKSTGSWNAIVR 279
Query: 151 SFLRHGLAKEAFGVFQAM 168
++++HG +A +++ M
Sbjct: 280 AYIQHGHISQALSLYKEM 297
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 73/151 (48%), Gaps = 7/151 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS--A 88
++F ++ + S NS + ++ + + + LF M TFT +L CS A
Sbjct: 460 EMFRGMASRNTVSWNSMVTAFCQHGDGGGAFELFKEMLLEGGEPHEQTFTSILNFCSHSA 519
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMY-----SKYGLLGESVEAFKEIEFKDVV 143
+ ++GK +H + G DS+P V T L+ MY +K G L ++ F I K+V+
Sbjct: 520 CSSLDQGKALHQRITASGVDSDPTVATCLLTMYLLNALAKCGALDDARAVFDGIRGKNVL 579
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+W A++ + +H A +F+ M + ++
Sbjct: 580 SWTAMIVGYAQHARGDGALELFREMELDGIQ 610
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 51/100 (51%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ + ++ +L C + +G ++H + + G D + + L+ MY G +G++ E
Sbjct: 1 MDSASYGRLLRECGLSKSLSKGMEIHKKLAESGVDKDTYLGNNLIQMYGNCGCVGKAREI 60
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F ++ ++V +W +LS++ ++G EA + M E +
Sbjct: 61 FDKLIDRNVYSWTIMLSAYAQNGHYMEALVLSYQMDLEGI 100
Score = 35.4 bits (80), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 9/131 (6%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD I ++ S + + Y + LF M + TFT +L ACS
Sbjct: 569 VFDGIRGKNVLSWTAMIVGYAQHARGDGALELFREMELDGIQADEITFTSILHACSHRGL 628
Query: 92 PERGKQVHALMIKGGTDSEPVVKTA-----LMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
G++ M+ + + +A +MDM ++ G +GE+ E K V
Sbjct: 629 VRVGREYFRSMV----EDHAIAPSAEHYNVVMDMLARAGRVGEAEEVAKVFPAIKHVALM 684
Query: 147 ALLSSFLRHGL 157
L+SS HG+
Sbjct: 685 TLVSSSQVHGV 695
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 4/171 (2%)
Query: 8 TNFPAKTCISIAD----ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
TNF + A A R V +VF+ + S N+ + Y R +
Sbjct: 300 TNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEI 359
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F + + L+ + + L ACSA+ G Q+H L +K G D V ++DMY+K
Sbjct: 360 FRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAK 419
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G L E+ F ++E KD V+WNA++++ ++ +E +F +M R +E
Sbjct: 420 CGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 73/139 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++ D S N+ + ++ ++ + T ALF M + + YTF V+ AC+ A
Sbjct: 429 IFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKA 488
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G +VH +IK G + V +A++DMY K G+L E+ + + +E + V+WN+++S
Sbjct: 489 LNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISG 548
Query: 152 FLRHGLAKEAFGVFQAMTR 170
F + A F M +
Sbjct: 549 FSSEKQGENALSYFSRMLQ 567
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 70/132 (53%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S NS + ++ + + F M + +T+ VL C+ L E GKQ+H +
Sbjct: 541 SWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQI 600
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
+K S+ + + ++DMYSK G + +S F++ +D VTW+A++ ++ HGL ++A
Sbjct: 601 LKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAI 660
Query: 163 GVFQAMTRERVE 174
+F+ M + V+
Sbjct: 661 KLFEEMQLQNVK 672
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ S NS L Y ++ + +F M + TF VL AC+ +
Sbjct: 126 LFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIED 185
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G QVH L I+ G DS+ V TAL+DMYS L + F E+ ++ V W+A+++
Sbjct: 186 YGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAG 245
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++R+ E +++ M E
Sbjct: 246 YVRNDRFTEGLKLYKVMLDE 265
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 70/152 (46%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
K+ + +F E+ + ++ + Y R+ F L+ M + ++ TF
Sbjct: 219 KKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAF 278
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+C+ L A E G Q+HA +K + +V TA +DMY+K + ++ + F
Sbjct: 279 RSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQ 338
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ NAL+ + R EA +F+++ + ++F
Sbjct: 339 SHNALIVGYARQDQVLEALEIFRSLQKSYLDF 370
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF+ + CS L A GKQ HA + G V L+ Y K L + F ++
Sbjct: 40 TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+DV++WN ++ + G + A +F +M V
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDV 135
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FDE+S DL N + Y + + +F M + +TFT ++ +C L +
Sbjct: 236 FDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSC 295
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GKQVH L+I+ D + +V +AL+DMYSK + ++ +AF + K++V+W ++ +
Sbjct: 296 GLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGY 355
Query: 153 LRHGLAKEAFGVFQAMTR 170
+HG KEA + Q M R
Sbjct: 356 GQHGDGKEAMRLLQEMIR 373
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 4/148 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSR-NFPATWALFCYMHSTCLNLTA---YTFTPVLGAC 86
++FDE+ ++ S N+ + F F Y L + A T +L A
Sbjct: 129 KMFDEMPLKNVVSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRAS 188
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
L +Q+H ++K G DS V +AL+D Y+K+GL+ E+ AF E+ +D+V WN
Sbjct: 189 IELNDVGICRQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWN 248
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S + +G+ +AFGVF+ M E V+
Sbjct: 249 VMVSCYALNGVQGKAFGVFKLMRLEGVK 276
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 51/87 (58%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L +C L A QVHA +++ G ++ + AL+ YSK G +G + ++F + D
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPD 445
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++W +L+ ++ HGL+KE VF+ M
Sbjct: 446 IISWTSLMGAYAFHGLSKEGVEVFEKM 472
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL- 153
GKQ+HA +IK G + ++ ++ +Y K + + F E+ K+VV+WN L+ +
Sbjct: 92 GKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE 151
Query: 154 ---RHGLAKEAFGVFQAMTRE 171
+ L + F F+ M E
Sbjct: 152 GNCKFALVRLGFHYFRQMVLE 172
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + +L N+ L Y ++ LF M +T+T +L AC+ L
Sbjct: 405 KVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLE 464
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+Q+H+ +IK + V+ L+DMY+K G L E+ + F+ I +D V+WNA++
Sbjct: 465 CLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIV 524
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++ EAF +F+ M + +
Sbjct: 525 GYVQEEDEDEAFNMFRRMILDGI 547
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
L+ MH TF VL ACS L + G+ +H+L+ G DS+ + +A++DMY+
Sbjct: 741 LYQEMHRNNARPDQATFASVLRACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYA 800
Query: 123 KYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K G + SV+ F+E+ K DV++WN+++ F ++G A+ A +F M R+
Sbjct: 801 KCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYAENALKIFDEMKHTRI 852
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ + F+++ D+ + NS L Y+R + F + + ++ +T+ VL +C+
Sbjct: 134 FAAKAFNQLEKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCA 193
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GKQVH +IK G + + +L+DMYSK G L ++ + F + D V+W A
Sbjct: 194 RLVDIDLGKQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTA 253
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
+++ +++ GL +EA VF+ M +
Sbjct: 254 MIAGYVQVGLPEEALKVFEDMQK 276
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 1/141 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F+ I + D S N+ + Y + + + +F M + + +L C+ L
Sbjct: 506 QQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQ 565
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+G+QVH ++K G + ++L+DMY K G + + F + + VV+ NA+++
Sbjct: 566 ALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIA 625
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ ++ L EA +FQ M E
Sbjct: 626 GYAQNDLV-EAIDLFQEMQNE 645
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M T + T T VL A ++L A G VHA IK G +S V ++L++MY+K
Sbjct: 337 FKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAK 396
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + + F ++ +++V WNA+L + ++G A + +F M
Sbjct: 397 CEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEM 441
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 77/167 (46%), Gaps = 11/167 (6%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+TC+ +L YV VF + + S+N+ + Y ++ A LF
Sbjct: 583 QTCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVEAI-DLFQE 641
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKY 124
M + LN + TF +L AC+ G+Q+H L+ K G D + + +L+ MY
Sbjct: 642 MQNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGD-FLGVSLLVMYMNS 700
Query: 125 GLLGESVEAFKEIEF-KDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ F E ++ K + W A++S ++G ++EA ++Q M R
Sbjct: 701 QRKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHR 747
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 47/78 (60%)
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A K +HA +K G S+ + +A++D+Y+K G + + +AF ++E +D++ WN++LS
Sbjct: 96 ASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLS 155
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ R G ++ F ++
Sbjct: 156 MYSRQGSLEQVIWCFGSL 173
>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g37170-like [Cucumis sativus]
Length = 724
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 84/156 (53%), Gaps = 8/156 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI +A RY+ FD++ D+ S + + +Y ++ +ALF ++ ++ +
Sbjct: 299 CGSIEEA---RYI-----FDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMP 350
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF VL AC+ L A + GKQ+HA M++ G DS +AL+ MYSK G + + F
Sbjct: 351 NDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVF 410
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ + D+ +W +LL + +HG +A F+ + +
Sbjct: 411 EILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLK 446
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 49/204 (24%)
Query: 6 RMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
R+ + AK C S+ DA +VFDE+ H DL S N + Y + NF LF
Sbjct: 158 RLLDMYAK-CGSLVDA--------EKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFD 208
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPER------------------------------- 94
M N +++T ++ C PE
Sbjct: 209 KMP----NRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAI 264
Query: 95 -----GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
GK++H +++ G DS+ VV +L+DMY K G + E+ F ++E +DVV+W ++
Sbjct: 265 PSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMI 324
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++L++G +E F +F+ + +
Sbjct: 325 HTYLKNGRREEGFALFRHLMNSNI 348
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A + +L C A + GKQVHA IK + L+DMY+K G L ++ + F
Sbjct: 119 ASIYLTLLKFCLKQRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKCGSLVDAEKVFD 177
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E+ +D+ +WN ++S +++ G ++A +F M
Sbjct: 178 EMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM 210
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 76/142 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + L S N+ + Y ++ P ++ALF + + + T ++ CS
Sbjct: 303 VFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSD 362
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ +H+ +I+ +S V+ TA++DMYSK G + ++ F + K+V+TW A+L
Sbjct: 363 LENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVG 422
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
++G A++A +F M E+V
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKV 444
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + ++ + + L +++ LFC M + + T ++ C+ L +
Sbjct: 404 VFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGS 463
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF-KEIEFKDVVTWNALLS 150
+G+ VHA I+ G + V+ +AL+DMY+K G + + + F E KDV+ N+++
Sbjct: 464 LTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIM 523
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG + A GV+ M ER++
Sbjct: 524 GYGMHGHGRYALGVYSRMIEERLK 547
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
M NF K +ADA +VFD + D+ NS + Y + F + +F
Sbjct: 186 MVNFLVKRGY-LADA--------QKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLE 236
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M L + T +L AC + G H+ ++ G ++ V T+L+DMYS G
Sbjct: 237 MIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGD 296
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
G + F + + +++WNA++S ++++G+ E++ +F+ + + F
Sbjct: 297 TGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGF 345
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ VFD+ S + + N+ + + R++ LF M S + + +YT L AC+
Sbjct: 97 HARNVFDQCSLPETAVCNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACT 156
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E G ++ ++ G V +++++ K G L ++ + F + KDVV WN+
Sbjct: 157 DLLDDEVGMEIIRAAVRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNS 216
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ +++ GL E+ +F M
Sbjct: 217 IIGGYVQKGLFWESIQMFLEM 237
Score = 43.1 bits (100), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
K +HA +IK +E + L+ +YS G LG + F + + NA+++ FLR+
Sbjct: 64 KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVCNAMIAGFLRN 123
Query: 156 GLAKEAFGVFQAMTRERVEF 175
E +F+ M +E
Sbjct: 124 QQHMEVPRLFRMMGSCDIEI 143
>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
Length = 745
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 80/144 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ ++ D + + + +T++ +F M + + YTF +L AC AL
Sbjct: 227 RLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALS 286
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+HA +I+ D V +AL+DMYSK + + F+ + K++++W AL+
Sbjct: 287 ALEQGKQIHAYIIRTRYDDNVFVGSALVDMYSKCRSIKLAETVFRRMTCKNIISWTALIV 346
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G ++EA VF M R+ ++
Sbjct: 347 GYGQNGCSEEAVRVFSEMQRDGID 370
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF ++ ++ S + + Y ++ +F M ++ YT V+ +C+ L +
Sbjct: 329 VFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLAS 388
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q H L + G V AL+ +Y K G + ++ F E+ F D V+W AL+S
Sbjct: 389 LEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSG 448
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + G AKE +F+ M + V+
Sbjct: 449 YAQFGRAKETIDLFEKMLAKGVK 471
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 82/178 (46%), Gaps = 33/178 (18%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM----------------- 67
R+ +VFD + H +L + N+ L + +R ALF M
Sbjct: 56 RHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIVSYNAVIAGFSG 115
Query: 68 ---HSTCLNL-------------TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP 111
H+ + + + T + ++ A SAL GKQ H +++ G +
Sbjct: 116 GGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLGFGANA 175
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
V + L+DMY+K L+G++ AF E++ K+VV +N +++ LR + +EA +F+ MT
Sbjct: 176 FVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMT 233
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA H++FDE+S D S + + Y + T LF M + +
Sbjct: 421 CGSIEDA--------HRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKGVKP 472
Query: 75 TAYTFTPVLGACSALPAPERGKQ-VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
TF VL ACS E+G+ H++ G T ++D+YS+ G L E+ E
Sbjct: 473 DGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEAEEF 532
Query: 134 FKEIEFK-DVVTWNALLSS 151
K++ D + W LLS+
Sbjct: 533 IKQMPMHPDAIGWGTLLSA 551
>gi|255591025|ref|XP_002535423.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223523164|gb|EEF26960.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 563
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 8 TNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
+N T D L R + FD I D S N+ + Y +SR++ LF M
Sbjct: 272 SNIVIDTYAKCGDLLASR-----KAFDRIKCRDSVSWNTLINGYIQSRSYGEGVKLFKKM 326
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
L + TF +L + L E GK++H + K G DS+ VV AL+DMYSK G +
Sbjct: 327 KMD-LKPDSITFVTLLSISTRLADTELGKEIHCDLAKLGFDSDLVVSNALVDMYSKCGNV 385
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+S++ F+ ++ +D+VTWN ++++ ++ AF + M E +
Sbjct: 386 KDSLKVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEEL 431
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 18 IADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
I +AL Y V VF+E++H D+ S NS + Y+ + + ++ +
Sbjct: 70 IGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEIYYELRIAG 129
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
L +T + VL AC L A + G+ +H L+ K G + + ++ L+ MY K+G L ++
Sbjct: 130 LKPDNFTLSSVLPACGGLLAVKEGEVIHGLVEKLGMNIDVIMSNGLLSMYFKFGRLMDAQ 189
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F ++ KD V+WN L+ + + L +E+ +F+ M +
Sbjct: 190 RVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVK 228
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++ D+L +VF+ + D+ + N+ + + ++ + + + M + L
Sbjct: 382 CGNVKDSL--------KVFENMKVRDIVTWNTIIAACVQAEDCTLAFRMISQMRNEELIP 433
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T +L CS + A +GK+VHA K G +S V AL++MYSK L + F
Sbjct: 434 DMGTLLGILPICSLIAAKRQGKEVHACTFKFGFESTVPVGNALIEMYSKCSNLKYCIRVF 493
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++++ KDVVTW AL+S++ +G K+A F M
Sbjct: 494 EDMKTKDVVTWTALVSAYGMYGEGKKALRAFAEM 527
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + + T + F L+ M + YTF V+ AC+AL E G V +++
Sbjct: 2 NSVIRALTHNGLFSKALDLYFKMKDFNVKPDTYTFPSVINACAALGDFEIGNVVQNHVLE 61
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + + AL+DMY+++G L ++ F+E+ +D+V+WN+L+S + +G EA +
Sbjct: 62 IGFGFDLYIGNALVDMYARFGDLVKARNVFEEMTHRDIVSWNSLISGYSANGYWDEALEI 121
Query: 165 F 165
+
Sbjct: 122 Y 122
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + +VF+++ D S N+ + Y + F + LF M T T VL
Sbjct: 184 RLMDAQRVFNKMVVKDYVSWNTLICGYCQMELFEESIQLFREMVKR-FRPDLLTITSVLR 242
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC L E GK VH +++ G + + ++D Y+K G L S +AF I+ +D V+
Sbjct: 243 ACGLLRDLEFGKFVHDYILRSGIEFDVTASNIVIDTYAKCGDLLASRKAFDRIKCRDSVS 302
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN L++ +++ E +F+ M +
Sbjct: 303 WNTLINGYIQSRSYGEGVKLFKKMKMD 329
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 74/148 (50%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
Y +VFDE+ ++ + + + Y + R F +F M + + T + VL A
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ + A RG++VH +IK + V T L+D Y+K G L E++ F+ + K+V TW
Sbjct: 316 CAHVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTW 375
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ F HG A A +F M V
Sbjct: 376 TAMINGFAAHGYAIGAVDLFHTMLSSHV 403
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
+ + +VFD D+ S + + + R+ + F M + + T VL A
Sbjct: 154 FEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGVAANEMTVVSVLKA 213
Query: 86 CSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
G+ +H ++ G + + ++L+DMY K G ++ + F E+ ++VVT
Sbjct: 214 TRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYDDAQKVFDEMPSRNVVT 273
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
W AL++ +++ ++ VF+ M + V
Sbjct: 274 WTALIAGYVQGRCFEKGMFVFEEMLKSDV 302
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +TF P+L A L Q HA ++K G DS+ V+ +L+ YS GL F
Sbjct: 103 SRHTFPPLLKAVFKLRDAN-PFQFHAHILKFGFDSDLFVRNSLISGYSNCGLFEFGSRVF 161
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E KDVV+W A++ F+R+ + EA F M R V
Sbjct: 162 DGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKRSGV 200
>gi|225441321|ref|XP_002274344.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 739
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 10/158 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI +A ++FDE++H DL S S + Y +F + LF M +
Sbjct: 198 CGSIGNA--------SKLFDEMTHRDLVSWTSIISGYIYGESFSRGFKLFNKMRME-MEP 248
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA- 133
+ T +L ACSA + G+++H+ +IK G + V+ +++ MY+K G GE VE
Sbjct: 249 NSVTMVVMLQACSAFESVNEGRELHSYVIKKGFMVDRSVQNSILRMYTKTGGSGEEVETF 308
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F EIE +D+++WN L++ + G E F M RE
Sbjct: 309 FSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRRE 346
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 78/149 (52%), Gaps = 6/149 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F +I H + + +S + +T++ F L+ M ++ L + ++ A + L
Sbjct: 406 QLFRDIPHRNSITWSSMMSGFTQNGFFKEAIELYQQMLASGLQPNHDIISTLVIAYTHLG 465
Query: 91 APERGKQVHALMIKGGT-----DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
A + GK HA I+ + DS P+ +T+L++MY + G + ++ F + KDVVTW
Sbjct: 466 ALQLGKATHAFFIRNLSSWPEEDSAPL-ETSLLNMYIRCGSISSALICFNRVVVKDVVTW 524
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ F HGLA EA F++M V+
Sbjct: 525 TSMIEGFGTHGLAFEALKFFKSMLESEVQ 553
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F EI D+ S N + Y+ + F M + + + T V+ A +
Sbjct: 309 FSEIEERDIISWNILIAFYSFRGDIAEVAERFNEMRREVTS-SIESLTLVVSAIANCANL 367
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
G +H IK G + V+ T L+ +Y+K G L S + F++I ++ +TW++++S F
Sbjct: 368 SEGGMLHCSAIKTGLH-DTVLMTCLLALYAKCGALEISAQLFRDIPHRNSITWSSMMSGF 426
Query: 153 LRHGLAKEAFGVFQAM 168
++G KEA ++Q M
Sbjct: 427 TQNGFFKEAIELYQQM 442
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+ VH + +K G + ++++Y K G +G + + F E+ +D+V+W +++S +
Sbjct: 167 EYGETVHCVAMKMGFGQDVYFGNTMLEVYVKCGSIGNASKLFDEMTHRDLVSWTSIISGY 226
Query: 153 LRHGLAKEAFGVFQAMTRE 171
+ F +F M E
Sbjct: 227 IYGESFSRGFKLFNKMRME 245
>gi|302810635|ref|XP_002987008.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
gi|300145173|gb|EFJ11851.1| hypothetical protein SELMODRAFT_182822 [Selaginella moellendorffii]
Length = 694
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 89/174 (51%), Gaps = 23/174 (13%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTR-----SRNFPATW 61
+ N AK C S+ADA+ +FD + N +FS+T ++N
Sbjct: 89 LVNMYAK-CRSLADAIA--------IFDRMK-------NRSVFSWTIMVTAFAQNGQLQR 132
Query: 62 ALFCYMHSTC--LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
A+ CY C ++ A TF +L ACS+ G+++ A + G DS+ +V +A+++
Sbjct: 133 AIQCYRQMCCDGVDPNAVTFVALLAACSSGGELAAGRKIAARVEASGLDSDLIVGSAIVN 192
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
Y K G L E+ EAF + K+ VTWN +++++++ G A +A +F M E V
Sbjct: 193 FYGKCGRLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGV 246
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 70/131 (53%), Gaps = 6/131 (4%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMI------ 103
+Y R+ + LF M+ T T +LGACS+L ++GK +H+L++
Sbjct: 16 AYVRADHGSDALQLFRTMNQEGDRADEVTLTTLLGACSSLEDLQQGKMIHSLIVELGYGE 75
Query: 104 KGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
+ G + + +V +L++MY+K L +++ F ++ + V +W ++++F ++G + A
Sbjct: 76 QDGEEQDLMVGNSLVNMYAKCRSLADAIAIFDRMKNRSVFSWTIMVTAFAQNGQLQRAIQ 135
Query: 164 VFQAMTRERVE 174
++ M + V+
Sbjct: 136 CYRQMCCDGVD 146
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 72/154 (46%), Gaps = 8/154 (5%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + FD + + + N + +Y +S LF M + A + +LG
Sbjct: 199 RLDEAREAFDRMPAKNNVTWNGMIAAYVQSGAATQAMDLFATMEDEGVVPDAMAVSSILG 258
Query: 85 ACSALPAPERGKQVHALMI--KGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
ACS L E GK++H+ +I + S+ V AL+ MY++ G L ++ F I K+
Sbjct: 259 ACSGL---ESGKRIHSAVIDRRQELQSDRAVCNALVHMYARCGSLDDARLVFLAIPSKNT 315
Query: 143 VTWNALLSSFLRHGLAKE---AFGVFQAMTRERV 173
V+W ++++F + + AF +F+ M + V
Sbjct: 316 VSWTTIIAAFAQQENRDDIEAAFQLFREMDLDGV 349
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +LGAC+A A G+++H + G S +V AL+ MY +G + ++ F+E++
Sbjct: 465 MSTILGACTAHQATSLGRELHRRARELGYASNTIVGNALVFMYGSWGRVDDAARVFQELK 524
Query: 139 FK---DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ T+ A+++ + R G +A ++ M VE
Sbjct: 525 NANSPNSNTFTAMIAGYARQGRTLQALSLYNEMNLHGVE 563
>gi|356570285|ref|XP_003553320.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26630,
chloroplastic-like [Glycine max]
Length = 474
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 76/140 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+++ ++ S + + Y + + + LF M + + YT ++ AC+ +
Sbjct: 209 ELFEQMPSKNVVSWTAIIDGYVKHKQPIEAFDLFERMQADNVRPNEYTLVSLVRACTEMG 268
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G++VH +K G + EP + TAL+DMYSK G L ++ F ++ + + TWN +++
Sbjct: 269 SLKLGRRVHDFALKNGFELEPFLGTALIDMYSKCGNLDDARTVFDMMQMRTLATWNTMIT 328
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
S HG EA +F+ M +
Sbjct: 329 SLGVHGYRDEALSIFEEMEK 348
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD+++ D+ + N + +YT + + LF M +T+ V+ AC
Sbjct: 74 YATLVFDQLNAPDVFTWNVMIRAYTIGGSPKMAFLLFKAMLYQGFAPDKFTYPCVINACM 133
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK------------------------ 123
A A + G+ HAL IK G + V+ +M++Y K
Sbjct: 134 AYNALDVGRVAHALAIKMGFWGDLYVQNTMMNLYFKCENVDDGWNVFDKMCVRNVFAWTT 193
Query: 124 -------YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G L + E F+++ K+VV+W A++ +++H EAF +F+ M + V
Sbjct: 194 VIAGFVACGKLDTARELFEQMPSKNVVSWTAIIDGYVKHKQPIEAFDLFERMQADNV 250
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
KQVH +I+ G + ++ L+ + YG + + F ++ DV TWN ++ ++
Sbjct: 41 KQVHGKIIRYGLTYDQLLVRKLIQLSPSYGKMKYATLVFDQLNAPDVFTWNVMIRAYTIG 100
Query: 156 GLAKEAFGVFQAM 168
G K AF +F+AM
Sbjct: 101 GSPKMAFLLFKAM 113
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 76/139 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + + + +S Y ++ + ALF T L + + V+ AC+ L A
Sbjct: 222 VFESMPDRSVVTWSSMAAGYVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAA 281
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GKQ++AL+ K G S V ++L+DMY+K G + ES + F+++E ++VV WNA++S
Sbjct: 282 MIEGKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISG 341
Query: 152 FLRHGLAKEAFGVFQAMTR 170
RH + E +F+ M +
Sbjct: 342 LSRHARSLEVMILFEKMQQ 360
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 75/139 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ QVFDE+ L S N+ + S T++ L M + +T + VL AC+
Sbjct: 117 FARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACA 176
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A A + +HA IK D V TAL+D+Y+K GL+ ++V F+ + + VVTW++
Sbjct: 177 AKCALSECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSS 236
Query: 148 LLSSFLRHGLAKEAFGVFQ 166
+ + ++++ + ++A +F+
Sbjct: 237 MAAGYVQNEMYEQALALFR 255
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 73 NLTAYTFT-PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
N T +F +L C+ +GK HA ++ G ++ + L++MYSK G + +
Sbjct: 60 NATHVSFVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFAR 119
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F E+ + +V+WN ++ S ++G EA + M RE F
Sbjct: 120 QVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPF 163
Score = 37.4 bits (85), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+++VF ++ ++ N+ + +R LF M L+ TF VL AC
Sbjct: 320 SYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGH 379
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVT-WN 146
+ +G++ LM K + V + ++D S+ G + E+ + ++ F + W
Sbjct: 380 MGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLPFNASASMWG 439
Query: 147 ALLSSFLRHG 156
+LL+S HG
Sbjct: 440 SLLASCRTHG 449
>gi|383152426|gb|AFG58310.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 61/95 (64%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L +++F +L AC++L A ++GK +H +I+ G S V+ +L+DMY+K G L ++ +
Sbjct: 5 LDSHSFASILPACASLAALDQGKGIHEDIIRSGLQSYVTVENSLLDMYAKCGSLEDARKV 64
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + +DVV+WNA++ + HG KEA +F+ M
Sbjct: 65 FNRMTTRDVVSWNAMIVGYAIHGCGKEALQLFEQM 99
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ DL NS Y + LF + + +TF ++ A L +
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLAS 570
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G++ H ++K G + P + AL+DMY+K G ++ +AF +DVV WN+++SS
Sbjct: 571 VQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ HG K+A + + M E +E
Sbjct: 631 YANHGEGKKALQMLEKMMSEGIE 653
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
Y + VL ACS LP E GKQ+HA +++ G + + + L+D Y K G + + + F
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ K++++W LLS + ++ L KEA +F +M++
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL------FCYMHSTCLNLTAYTFTPVLG 84
+VFD + D+ N+ + Y+R W L F M + + TF +L
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSR---LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A ++L + KQ+H LM K G + + +AL+D+YS L +S F E++ KD+V
Sbjct: 463 ASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVI 522
Query: 145 WNALLSSFLRHGLAKEAFGVF--QAMTRER 172
WN++ + +++ +EA +F ++RER
Sbjct: 523 WNSMFAGYVQQSENEEALNLFLELQLSRER 552
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + H++F+ + + ++ S + L Y ++ LF M L Y + +L
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C++L A G QVHA IK ++ V +L+DMY+K L ++ + F DVV
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 145 WNALLSSFLRHGLA---KEAFGVFQAM 168
+NA++ + R G EA +F+ M
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDM 445
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGA 85
VY +VF+++ +L S ++ + + + + +F T + Y + + A
Sbjct: 96 VYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQA 155
Query: 86 CSALPAPERGK----QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
CS L RG+ Q+ + ++K G D + V T L+D Y K G + + F + K
Sbjct: 156 CSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
VTW ++S ++ G + + +F + + V
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+ FD + D+ NS + SY + M S + TF VL ACS
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E G + LM++ G + E ++ + + G L ++ E +++ K + W +L
Sbjct: 670 GLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 149 LSSFLRHG 156
LS + G
Sbjct: 730 LSGCAKAG 737
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 44/75 (58%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VH +I G + + + L+++YS+ G + + + F+++ +++V+W+ ++S+ HG+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 158 AKEAFGVFQAMTRER 172
+E+ VF R R
Sbjct: 126 YEESLVVFLEFWRTR 140
>gi|414878289|tpg|DAA55420.1| TPA: hypothetical protein ZEAMMB73_457942 [Zea mays]
Length = 534
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E+ +++S N + +Y++ R++ A+F M T ++ AC+ L
Sbjct: 212 ELFEEMPDRNVNSWNMAIAAYSQERSWADAVAVFNRMRLARFQPDPATMAVLMSACAQLG 271
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +QVH ++ KG + V +L+DMY+K G + ++ F E KD V++N ++
Sbjct: 272 SLSVARQVHGILRKGCVEMNFHVLNSLIDMYAKCGSISQAHLLFVETHLKDTVSYNVMIC 331
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ RHG ++A VF M++ER++
Sbjct: 332 ALARHGHGRDALQVFDEMSKERLQ 355
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A+T + V+ CSAL A G QVH ++ G V+ AL+DMY +G + ++ F
Sbjct: 93 NAFTASSVVRCCSALRAVRVGIQVHGFLVNAGLGRAEHVRAALVDMYGNHGRVADARRVF 152
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
E+ VV N +++ ++R G + VF M
Sbjct: 153 DEMSATSVVLGNTMVACYVRAGDVESGRVVFDRMV 187
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 62 ALFCY--MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
AL C+ M +++ +YT T V+GA E GK +HAL+ + G S V+ L+
Sbjct: 357 ALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFLEEGKAMHALIHRTGYISHLNVQNGLVS 416
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
MY++ G +G+S F +E DV++WNALL++F HG +EA +F+ M + ++
Sbjct: 417 MYARCGAIGDSKRVFWFMEEHDVISWNALLTAFAHHGYGREAVELFEQMRKTEIK 471
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++ + + NS ++ Y LF M +N++A++ + L CS L A
Sbjct: 126 LFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEA 185
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G QVH L++K G VV T+L+DMYSK G + +S F + ++V+TW ++++
Sbjct: 186 REVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTG 245
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ + EA + + M +
Sbjct: 246 YSQIEKPDEAMALVKEMVLQ 265
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y ++ C+ + G Q H+ ++K G S + +A++DMY+K G + + F +
Sbjct: 70 YFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQ 129
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + VVTWN+L+ +L K A +F M + +
Sbjct: 130 MPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAIN 167
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 7/148 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + ++ + S + Y++ AL M L T+ +L + S
Sbjct: 227 VFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLLSSFSGPDC 286
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE----IEFKDVVTWNA 147
QVH +I+ G +S + L+ +YSK S+E FK+ + D + WNA
Sbjct: 287 LSYCLQVHCCIIQLGLESNVYIAATLVTVYSK---CSSSLEDFKKVCSVVMTCDNIAWNA 343
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+++ + + G +EA F M + ++
Sbjct: 344 VIAGYSKLGRHEEALRCFHEMKQAGIDI 371
>gi|297790915|ref|XP_002863342.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309177|gb|EFH39601.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 576
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QV ++ + + SS N+ L Y S F MHS+ + L Y+ + VL A +AL
Sbjct: 275 QVLSDMPNRNSSSWNTILTGYVNSEQSGEATEFFTKMHSSGVGLDEYSLSIVLAAIAALA 334
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G +HA +K G DS VV +AL+DMYSK G+L + F + K+++ WNA++S
Sbjct: 335 VVPWGSLIHACALKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIMWNAMIS 394
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ R+G + EA +F + +ER
Sbjct: 395 GYARNGDSIEAIKLFNQLKQER 416
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
KT S+ DA H++FDE+ D+ S NS + Y +S F LF +H + +
Sbjct: 101 KTSDSLEDA--------HKLFDEMPDPDVISWNSLVSGYVQSGRFQEGLCLFLKLHRSDV 152
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESV 131
++FT L AC+ L G +H+ ++K G + VV L+DMY K + ++V
Sbjct: 153 LPNEFSFTAALAACARLHLWPLGACIHSKIVKLGLEKGNVVVGNCLIDMYGKCASMDDAV 212
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F+ +E KD V+WNA+++S R+G + F M
Sbjct: 213 LVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+H ++K G S + +LM Y L ++ + F E+ DV++WN+L+S +++
Sbjct: 75 RQLHGYVVKHGFVSNTRLSNSLMRFYKTSDSLEDAHKLFDEMPDPDVISWNSLVSGYVQS 134
Query: 156 GLAKEAFGVFQAMTRERV 173
G +E +F + R V
Sbjct: 135 GRFQEGLCLFLKLHRSDV 152
>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
Length = 534
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ GDL +S + + ++ + LF M T T VL AC+ L
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVH ++K D + ++ AL+DMY K G L ++ F + KDV++W+ +++
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236
Query: 151 SFLRHGLAKEAFGVFQAM 168
++G +KEA +F++M
Sbjct: 237 GLAQNGYSKEALKLFESM 254
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFD++ ++ S + + +Y+ ++ M + +T++ VL AC L
Sbjct: 20 QDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVRPNMFTYSSVLRACDGL 79
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+Q+H +IK G DS+ V++AL+D+YS++G L ++ F E+ D+V W++++
Sbjct: 80 FNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRVFDEMVTGDLVVWSSII 136
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ F ++ EA +F+ M R
Sbjct: 137 AGFAQNSDGDEALRLFKRMKR 157
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L++MY K+GLL ++ + F ++ ++VV+W ++S++ L +A M RE V
Sbjct: 6 LINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63
>gi|255543589|ref|XP_002512857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547868|gb|EEF49360.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 454
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 7/150 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTR----SRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+ QVFDEI D S NS + Y + S F + Y + + A T + +L
Sbjct: 246 SRQVFDEIVEKDAISWNSMIAVYAQNGLSSEAFEVFHGMIKYGY---VKYNAVTLSTLLL 302
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ A + GK +H +I+ G D +V T+L+DMY K G + + + F ++ K+V +
Sbjct: 303 ACAHSGALQTGKCIHDQVIRMGLDDNVIVGTSLIDMYCKCGRVQMARKTFDGMKEKNVKS 362
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
W A+++ + HG A+EA +F M R V+
Sbjct: 363 WTAMVAGYGMHGCAREALNIFYKMIRSGVK 392
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC--YMHSTCLN-------LTAYTFTPV 82
+FDEI+H ++ S + Y ++ + LF + + N + + V
Sbjct: 139 LFDEITHRNIVIWTSMITGYIQNDHAHEALLLFKQFLIEESERNEEKDEVLMDSVAMVSV 198
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L ACS + K VH ++K G D + ++ L+D Y+K G +G S + F EI KD
Sbjct: 199 LSACSRISGKGMTKGVHGFVVKKGLDEDVGIENTLLDAYAKCGEVGVSRQVFDEIVEKDA 258
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++WN++++ + ++GL+ EAF VF M +
Sbjct: 259 ISWNSMIAVYAQNGLSSEAFEVFHGMIK 286
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S NS + RS + + F M L TF + ACS+L GKQ H
Sbjct: 49 SWNSLIADLARSGDSIESLRAFYSMRKLNLKPNRSTFPCAIKACSSLLDLHWGKQTHQQA 108
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
+ G +S+ V +AL+DMYSK G L ++ F EI +++V W ++++ ++++ A EA
Sbjct: 109 LVFGFESDLFVSSALVDMYSKCGRLSDARILFDEITHRNIVIWTSMITGYIQNDHAHEAL 168
Query: 163 GVFQAMTRERVE 174
+F+ E E
Sbjct: 169 LLFKQFLIEESE 180
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ S +S + Y ++ F T ALF M + T V+ AC+ L A
Sbjct: 329 IFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAA 388
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA + + G ++ T L+DMY K G + ++E F + K + TWNAL+
Sbjct: 389 LEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILG 448
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+GL + + +F M + V
Sbjct: 449 LAMNGLVESSLDMFSNMKKCHV 470
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D+ + ++ + + ++ + F MH + + L AC+ L
Sbjct: 196 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 255
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK +H+L +K GT+S ++ AL+ MYSK G + + + F E D+++WN+++S
Sbjct: 256 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 315
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+L+ L A +F +M + V
Sbjct: 316 GYLKCNLVDNAKAIFDSMPEKDV 338
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 84/172 (48%), Gaps = 2/172 (1%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYV-YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
FIR T + A I + P ++ YT ++F+ I + + N + +Y ++ + +
Sbjct: 5 GFIRET-YAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHFAF 63
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L+ M S L YT+ ++ ACS + KQVH ++K G DS+ V+ L++ +
Sbjct: 64 TLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCF 123
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S + ++ F E D V+WN++L+ ++ G +EA ++ M +
Sbjct: 124 SVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSI 175
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF + +S+ N+ + + ++ +F M + TF VLGAC +
Sbjct: 429 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 488
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ MI +P VK ++D+ + G L E+ E + DV TW A
Sbjct: 489 LVDEGQHHFYSMIHD-HKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 547
Query: 148 LLSSFLRHG 156
LL + +HG
Sbjct: 548 LLGACKKHG 556
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L + ++ +L + E K ++ M + + +++ ++ GL+ E+ +
Sbjct: 142 LDSVSWNSILAGYIEIGNVEEAKHIYHQM----PERSIIASNSMIVLFGMRGLVVEACKL 197
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F E+ KD+VTW+AL++ F ++ + +EA F M +
Sbjct: 198 FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK 234
>gi|115455891|ref|NP_001051546.1| Os03g0795200 [Oryza sativa Japonica Group]
gi|50400032|gb|AAT76420.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108711537|gb|ABF99332.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113550017|dbj|BAF13460.1| Os03g0795200 [Oryza sativa Japonica Group]
Length = 611
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + + RS LF M + L T+ T VL AC+ L A
Sbjct: 195 MFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGA 254
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ +H + K DS V TAL+DMY+K G L +++ F+++E +D W+ ++ +
Sbjct: 255 LELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVA 314
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ HG +EA +F+ M ++
Sbjct: 315 YANHGYGREAISMFEEMKKQ 334
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 15 CISIADALPKRYVYTHQVFDEISH-GDLSSLNSQLFSYTRSRNFPATWA----LFCYMHS 69
C P Y QVFD I H GD+ N+ L Y R +F M
Sbjct: 72 CTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGGGGGGAEEAARVFVRMME 131
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YTF +L AC++ A E G+Q H + +K G V L++MY++ G +
Sbjct: 132 EGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA 191
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F ++ + VV++NA++++ +R L EA +F+ M
Sbjct: 192 ARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREM 230
>gi|361066821|gb|AEW07722.1| Pinus taeda anonymous locus 0_9722_01 genomic sequence
Length = 151
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L ++TF +L AC+ L A ++GK +H +I+ G S V+ +L+DMY+K G L ++ +
Sbjct: 5 LDSHTFASILPACANLAALDQGKGIHEDIIRSGLQSYVTVENSLVDMYAKCGSLEDARKV 64
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + +DVV+WNA++ + HG KEA +F+ M
Sbjct: 65 FNRMTTRDVVSWNAMIVGYAIHGCGKEALQLFEQM 99
>gi|255578455|ref|XP_002530092.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530403|gb|EEF32291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 718
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 1/154 (0%)
Query: 19 ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYT 78
A AL R ++F+++ + S N+ L Y RS + C M T ++ T
Sbjct: 334 AYALSGRTREARELFEKMPEWSVVSWNAMLAGYIRSLQWEEALDFVCLMRRTTEDIDHIT 393
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI- 137
+L C+ + E GKQ H + + G S +V AL+DMY K G L + F ++
Sbjct: 394 LGLLLNVCAGISDVEMGKQAHGFIYRHGFSSCILVGNALLDMYGKCGNLRSARVWFYQMS 453
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +D ++WNALL+S+ RH +++A +F M E
Sbjct: 454 QSRDNISWNALLTSYARHHQSEQAMMIFGEMQWE 487
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 8/168 (4%)
Query: 14 TCISIADALPKRYVYTHQV------FDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCY 66
+CI + +AL Y + F ++S D S N+ L SY R +F
Sbjct: 424 SCILVGNALLDMYGKCGNLRSARVWFYQMSQSRDNISWNALLTSYARHHQSEQAMMIFGE 483
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + +TF +L AC+ + A ++GK++H MI+ G + + V+ AL+DMYSK
Sbjct: 484 MQWE-TKPSTFTFGTLLAACANIFALDQGKEIHGFMIRNGYNLDTVISGALVDMYSKCRC 542
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L ++ F +DV+ WN+++ +G KE +F M +E V+
Sbjct: 543 LSYALTVFNRAGSRDVILWNSIILGCCHNGRGKEVLKLFGQMEKEGVK 590
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 71/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDE+ D S N+ + +YT+ LF M+ + TF VL +CS +
Sbjct: 112 RELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGVFANEITFASVLKSCSDV 171
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+Q+H L++K G ++ +AL+D+Y K ++ E+ F EIE + VTWN ++
Sbjct: 172 LDLSLSRQIHGLIVKCGFCGNVILGSALVDVYGKCKVMSEARLMFNEIENCNDVTWNVIV 231
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+L G +EA +F M
Sbjct: 232 RRYLDVGNEREAVKMFFKM 250
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+EI + + + N + Y N +F M T + +TF+ L ACSA+ A
Sbjct: 215 MFNEIENCNDVTWNVIVRRYLDVGNEREAVKMFFKMFQTDVRPLNFTFSNALIACSAMRA 274
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q+HA IK + + V ++L +MY+K G L + F + +DV++W +++S+
Sbjct: 275 LNEGMQIHAFAIKIKFEEDEAVSSSLSNMYAKCGKLESARMIFDQHGSRDVISWTSMVSA 334
Query: 152 FLRHGLAKEAFGVFQAM 168
+ G +EA +F+ M
Sbjct: 335 YALSGRTREARELFEKM 351
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 35/56 (62%)
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ Y K L ++ E F E+ +D +WNA++ ++ + G A++A G+F+ M +E V
Sbjct: 99 IETYGKCECLKDARELFDEMPQRDGGSWNAIIKAYTQCGYAEKALGLFKDMNKEGV 154
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 77/147 (52%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +++F +S D+ S NS + +S N A +F M + + + + L
Sbjct: 487 RMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVSISAALS 546
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ LP+ GK +H MIK + ++ L+DMY+K G L ++ F ++ K++V+
Sbjct: 547 ACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMKEKNIVS 606
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN++++++ HG K++ +F M +
Sbjct: 607 WNSIIAAYGNHGKLKDSLCLFHEMVEK 633
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 6/162 (3%)
Query: 18 IADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
+A +L K Y+ ++FD + D N L Y + + F M
Sbjct: 171 VASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKGFSLMRMDQ 230
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
++ A TF VL C++ + G Q+H L++ G D E +K +L+ MYSK G +++
Sbjct: 231 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAI 290
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F+ + D VTWN ++S +++ GL +E+ F M V
Sbjct: 291 KLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGV 332
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+T + PV+G AL + G+++H +IK G D+ + A++DMY+K G + + E
Sbjct: 438 ITLVSILPVIGGLLAL---KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI 494
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
F + +D+V+WN++++ + A +F+ M + F
Sbjct: 495 FGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICF 536
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F +S D + N + Y +S + F M S+ + A TF+ +L + S
Sbjct: 291 KLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFE 350
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E +Q+H +++ + + +AL+D Y K + + + F + DVV + A++S
Sbjct: 351 NLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMIS 410
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+L +GL +A +F+ + + ++
Sbjct: 411 GYLHNGLNIDALEMFRWLVKVKI 433
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--F 139
+L CS L +GKQVHA +I + ++ MY+ G + F ++
Sbjct: 37 LLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSRL 96
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ WN+++SSF+R GL +A + M
Sbjct: 97 SSIRPWNSIISSFVRMGLLNQALAFYFKM 125
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + S+ R A + M ++ TF ++ AC AL + + + +
Sbjct: 103 NSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEFLSDTVSS 162
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G D V ++L+ Y +YG + + + F + KD V WN +L+ + + G +
Sbjct: 163 LGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGASDSVIKG 222
Query: 165 FQAMTRERV 173
F M +++
Sbjct: 223 FSLMRMDQI 231
>gi|296085273|emb|CBI29005.3| unnamed protein product [Vitis vinifera]
Length = 587
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ D+ S NS L Y + ALF M + + T T +L AC+ L A
Sbjct: 170 LFSEMPCRDVVSWNSMLACYAQCGKPNEALALFDQMRAVGVKPTEATVVSLLSACAHLGA 229
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G +H + + +V TAL+DMY+K G + + + F +E KDV+ WN +++
Sbjct: 230 LDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNTIIAG 289
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG KEA +F+ M VE
Sbjct: 290 MAIHGHVKEAQRLFKEMKEAGVE 312
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
G D + V+K + + + +G ++ F E+ +DVV+WN++L+ + + G EA +F
Sbjct: 144 GVD-KGVLKVWMHNNKNTFGKRDDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALALF 202
Query: 166 QAM 168
M
Sbjct: 203 DQM 205
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 28 YTHQVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
Y +F +S D S NS + Y + P + +M L +TF VL AC
Sbjct: 645 YCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSAC 704
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + ERG +VH ++ +S+ V+ +AL+DMY+K G + + F+ + +++ +WN
Sbjct: 705 ATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASRFFEMMPARNLYSWN 764
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+++S + RHG ++ +F M
Sbjct: 765 SMISGYARHGHGTKSLDLFAQM 786
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 6/148 (4%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +F ++S+ ++ SLN + R + LF M + + L ++ +L A
Sbjct: 337 YAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDS-VELNPNSYMIILTAFP 395
Query: 88 ALPAPERGK----QVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
E GK +VHA +I+ G +++ + L++MY+K G + ++ F+ ++ KD
Sbjct: 396 EFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLMDNKDS 455
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
VTWN++++ ++ EA FQ M R
Sbjct: 456 VTWNSMITGLDQNKQFLEAVKTFQEMRR 483
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ +L S + + YTR+R LF M S Y F V+ AC
Sbjct: 129 KVFDEMPLRNLVSWSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECG 188
Query: 91 --APERGKQVHALMIKGGTDSEPVVKTALMDMYSK-YGLLGESVEAFKEIEFKDVVTWNA 147
+ G Q+H LM K ++ L+ MY G++ + AF I +++V+ N+
Sbjct: 189 EYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNS 248
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++S + + G A AF +F M +E
Sbjct: 249 MISVYCQRGDAVSAFDIFSTMQKE 272
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF +L A S+L E GKQ+HAL++K ++ ++ AL+ Y K G +G F +
Sbjct: 594 TFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENALLACYGKCGDMGYCENIFSRM 653
Query: 138 -EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +D V+WN+++S ++ + L +A + M ++
Sbjct: 654 SDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQK 688
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 9/146 (6%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C +I DA VF + + D + NS + +++ F F
Sbjct: 430 LINMYAK-CGAINDACV--------VFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQE 480
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M T L + +T L +C++L G+Q+H +K G D + V AL+ +Y + G
Sbjct: 481 MRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGY 540
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSF 152
+ E +AF + D V+WN+L+ +
Sbjct: 541 VKECQKAFSLMLDYDHVSWNSLIGAL 566
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 7/154 (4%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC----LNLTAYTFTPVL 83
Y + FD I +L SLNS + Y + + + + +F M L YTF ++
Sbjct: 230 YARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLI 289
Query: 84 GACSALPAPERG--KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
A +L +Q+ + K G + V +AL+ ++K G +G + F+++ +++
Sbjct: 290 SATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRN 349
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VV+ N L+ +R +EA +F M ++ VE
Sbjct: 350 VVSLNGLIIGLVRQKRGEEAVELFMEM-KDSVEL 382
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 45/76 (59%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+++H + K G ++ + L+++Y++ G LG + F E+ +++V+W+ L+S + R+
Sbjct: 93 EELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTRN 152
Query: 156 GLAKEAFGVFQAMTRE 171
+ EA +F+ M +
Sbjct: 153 RMPNEACELFRKMVSD 168
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 84/165 (50%), Gaps = 10/165 (6%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFC-YMH 68
I ++ L RY + + FD+I D+ + NS + +Y R +F A F ++
Sbjct: 75 IFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARIGHFHAAVDCFNEFLS 134
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
++ L YTF PV+ AC L + G++VH L++K G + + + + + YS++G +
Sbjct: 135 TSFLQSDHYTFPPVIRACGNL---DDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVS 191
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F + +D+ TWNA++S F +G EA VF M + V
Sbjct: 192 LACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV 236
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD + D+ + N+ + + + +F M +++ + T + +L C L
Sbjct: 195 NLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLD 254
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G +H IK G + + V AL++MY+K+G L + F +++ +D+V+WN+LL+
Sbjct: 255 DIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLA 314
Query: 151 SFLRHGLAKEAFGVFQAM 168
+F ++ A GV+ M
Sbjct: 315 AFEQNKKPVIALGVYNKM 332
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 5/147 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY---MHSTCLNLTAYTFTPVLGACS 87
+VF+ + D+ S NS + Y S+N A A+ Y + + T+ +L A S
Sbjct: 398 KVFEGLPVKDVISWNSLITGY--SQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHS 455
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A ++G + H +IK + V T L+DMY K G L +++ F E+ + V+WNA
Sbjct: 456 QLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNA 515
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S HG +A +F+ M E V+
Sbjct: 516 IISCHGLHGYGLKAVKLFKEMQSEGVK 542
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 71/138 (51%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+++ D+ S NS L ++ +++ ++ MHS + T + + L
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGN 356
Query: 92 PERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +H + + + + A++DMY+K G + + + F+ + KDV++WN+L++
Sbjct: 357 FLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLIT 416
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++GLA EA V+ +M
Sbjct: 417 GYSQNGLANEAIDVYSSM 434
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
KQ+HAL++ G + L++ Y+ G + + F +I+ KDV TWN+++S++ R
Sbjct: 60 KQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARI 119
Query: 156 GLAKEAFGVFQ 166
G A F
Sbjct: 120 GHFHAAVDCFN 130
>gi|347954472|gb|AEP33736.1| chlororespiratory reduction 21, partial [Raphanus sativus]
Length = 806
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI ++ + N+ + Y ++ L C M
Sbjct: 182 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLMCDMR 241
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + GKQ HA+ + G + + ++ T++++ Y K GL+
Sbjct: 242 EEGVEPTRVTVSTCLSASANMCGVGEGKQSHAVAVVNGLEMDNILGTSVLNFYCKVGLIE 301
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL ++A + + M E+++F
Sbjct: 302 YAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKF 348
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L ++ T L AC+ L + G+ VH +I+ S V ++TAL+DMY+K G
Sbjct: 512 MQESGLRPNVFSITVALSACANLASLHLGRSVHGYIIRNQLHSSSVSIETALIDMYAKCG 571
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ + FK + ++ +NA++S++ G KEA +++++
Sbjct: 572 DISKAEKVFKRKSYSELPLFNAMISAYALSGNVKEAIDLYRSL 614
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T + ++ A +
Sbjct: 302 YAEMVFDRMIGKDVVTWNLLISGYVQQGLVEDAIRMCKLMRLEKLKFDCVTLSTLMSAAA 361
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ + + ++DMY+K G + ++ F KD++ WN
Sbjct: 362 RTQNSKLGKEVQCYCIRHSFESDIGLASTVIDMYAKCGSIVDAKRVFDSTVQKDLILWNT 421
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 422 LLAAYAESGLSGEALRLFYEMQLESV 447
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ +L C G+Q+HA ++K G ++T L+ Y+K + F +
Sbjct: 47 YGEILQGCVYERDFHTGRQIHARILKNGEFYAKNEYIETKLVIFYAKCDAHEIAETLFSK 106
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ ++V +W A++ R GLA+ A F M ++ +
Sbjct: 107 LRVRNVFSWAAIIGVKCRVGLAEGALMGFVEMLKDEI 143
>gi|302783925|ref|XP_002973735.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
gi|300158773|gb|EFJ25395.1| hypothetical protein SELMODRAFT_99756 [Selaginella moellendorffii]
Length = 836
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 77/142 (54%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSAL 89
+VF+ + D+ S ++ + +Y +S ++ M S T + A TF V+GAC+
Sbjct: 275 KVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTGC 334
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG QVH ++ G +++ V +AL+ MY K G L ++ +AF +E +DV+ WN +L
Sbjct: 335 GDVIRGIQVHGRLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFML 394
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S++ G ++ ++AM E
Sbjct: 395 SAYSERGSPQQVIEAYEAMDVE 416
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 2/146 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + D+ N + Y L+ MH + TF L ACS +
Sbjct: 475 QVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVEANNVTFANALKACSKIK 534
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF--KEIEFKDVVTWNAL 148
E G +V A++ G +++ V TAL++MY+ G L + F + E +DVV W A+
Sbjct: 535 DIETGSKVEAMITTKGFETDVVTDTALLNMYAACGDLEAAKRVFGSRRGERRDVVFWTAM 594
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
++S+ + G +EA +++ M E ++
Sbjct: 595 IASYAQAGRGEEALALYKTMLSEEIK 620
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
Query: 6 RMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPA 59
R+ + +T +++ AL + YV + FD + D+ N L +Y+ R P
Sbjct: 346 RLVSLGLETDVAVGSALVQMYVKCGSLEDAKKAFDRVEKRDVLCWNFMLSAYSE-RGSPQ 404
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
+ + + A T+T VL ACSA+ +G++VH+ ++ G +++ ++TAL+
Sbjct: 405 Q--VIEAYEAMDVEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETALLS 462
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+Y K L + + F+ + KDV+ WN ++ ++ H EA ++ M VE
Sbjct: 463 LYIKCRSLKSACQVFEAMGKKDVIPWNFMMVGYIDHDCDTEALRLYARMHEAGVE 517
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 64/121 (52%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
+ SY ++ AL+ M S + + T+T VL ACS+L G+++H+ +
Sbjct: 595 IASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSKLEGKAE 654
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+ + V+ +L+ MY++ G L ++ F +I +DV +W ++++F HG + A + +
Sbjct: 655 ELDVAVQNSLLSMYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVRE 714
Query: 168 M 168
M
Sbjct: 715 M 715
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VFD + ++ S + + +Y ++ + + LF M S + A T VLGACS
Sbjct: 77 SREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGIRPNAVTCLHVLGACSY 136
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
GK+VHA + + ++T+L++MY+K G ++ F + KD+VTWNA+
Sbjct: 137 QNELPFGKKVHAYISASEFKWDISLQTSLVNMYAKCGSPADAKAVFDSMARKDIVTWNAM 196
Query: 149 LSSFLRHG 156
+ + +G
Sbjct: 197 AGASVHNG 204
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C S ADA VFD ++ D+ + N+ + S + + L
Sbjct: 165 LVNMYAK-CGSPADA--------KAVFDSMARKDIVTWNAMAGA---SVHNGQSHKLLRE 212
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + A T+ + S L +Q ++ G S V+ AL+++Y+K G
Sbjct: 213 MDLQGVKPNATTYASITRGSSTLTGCRAMEQ---RLLASGYMSHVPVQNALVNVYAKCGD 269
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
L + + F +E KDV++W+ ++S++ + G EA +++ M E
Sbjct: 270 LEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESE 314
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 35/57 (61%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
L+ ++ K+G +S E F ++ K+V +W+ ++ ++ ++G EAF +F+ M E +
Sbjct: 64 LIQLHGKFGNTQKSREVFDGMQQKNVYSWSMMIGAYAQNGHRNEAFLLFERMESEGI 120
>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + + RS LF M + L T+ T VL AC+ L A
Sbjct: 195 MFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGA 254
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ +H + K DS V TAL+DMY+K G L +++ F+++E +D W+ ++ +
Sbjct: 255 LELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVA 314
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ HG +EA +F+ M ++
Sbjct: 315 YANHGYGREAISMFEEMKKQ 334
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 15 CISIADALPKRYVYTHQVFDEISH-GDLSSLNSQLFSYTRSRNF----PATWALFCYMHS 69
C P Y QVFD I H GD+ N+ L Y R +F M
Sbjct: 72 CTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGWGGGCAEEAARVFVRMME 131
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YTF +L AC++ A E G+Q H + +K G V L++MY++ G +
Sbjct: 132 EGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA 191
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F ++ + VV++NA++++ +R L EA +F+ M
Sbjct: 192 ARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREM 230
>gi|15218823|ref|NP_171850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180302|sp|Q9LR72.1|PPR7_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g03510
gi|9280666|gb|AAF86535.1|AC002560_28 F21B7.13 [Arabidopsis thaliana]
gi|332189459|gb|AEE27580.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 429
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACSALPAPERGKQVH 99
L SL QL SY N LF MHS+ L L A+ F+ L +C+A P G VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A +K S P V AL+DMY K + + + F EI ++ V WNA++S + G K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 160 EAFGVFQAM 168
EA +++AM
Sbjct: 132 EAVELYEAM 140
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T ++ ACSA+ A K++H+ + + P +K+ L++ Y + G + F +
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E +DVV W++L+S++ HG A+ A FQ M +V
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKV 279
>gi|125546028|gb|EAY92167.1| hypothetical protein OsI_13880 [Oryza sativa Indica Group]
Length = 671
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + + RS LF M + L T+ T VL AC+ L A
Sbjct: 195 MFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLSACALLGA 254
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ +H + K DS V TAL+DMY+K G L +++ F+++E +D W+ ++ +
Sbjct: 255 LELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDMESRDKQAWSVMMVA 314
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ HG +EA +F+ M ++
Sbjct: 315 YANHGYGREAISMFEEMKKQ 334
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 15 CISIADALPKRYVYTHQVFDEISH-GDLSSLNSQLFSYTRSRNFPATWA----LFCYMHS 69
C P Y QVFD I H GD+ N+ L Y R +F M
Sbjct: 72 CTEQGAEAPAHLAYARQVFDRIPHPGDVIWYNTLLRGYARGGGGGGGAEEAARVFVRMME 131
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ YTF +L AC++ A E G+Q H + +K G V L++MY++ G +
Sbjct: 132 EGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGDVRA 191
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F ++ + VV++NA++++ +R L EA +F+ M
Sbjct: 192 ARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREM 230
>gi|255556057|ref|XP_002519063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541726|gb|EEF43274.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 386
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLNLTAYTFTPVLG 84
+YT Q+F +++ D N+ + S ++ F + ++LF Y M + ++ +AYTFT ++
Sbjct: 61 IYTRQIFLSVANPDSFLFNTLIKSTSKFHKF-SIYSLFFYNCMLLSDISPSAYTFTSIVK 119
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C+ L + + GK VH ++ G + V+ AL+ Y+K G LG + + F ++ + VV+
Sbjct: 120 SCADLSSLKLGKVVHGHVLVNGFGLDVYVQAALVACYAKSGDLGNARKVFDKMRERSVVS 179
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN+++S + ++G +EA +F+ M E E
Sbjct: 180 WNSIISGYEQNGFGREAIRLFKKMREEGFE 209
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ + S NS + Y ++ LF M + TF VL AC+ L
Sbjct: 167 KVFDKMRERSVVSWNSIISGYEQNGFGREAIRLFKKMREEGFEPDSATFVIVLSACAQLG 226
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G VH I G D V+ T+L++MY++ G + ++ E F ++ K+VVTW A++S
Sbjct: 227 ALSMGCWVHKYTIGHGLDLNVVLGTSLINMYTRCGTVTKAREVFDSMKEKNVVTWTAMIS 286
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ +G ++A +F M R
Sbjct: 287 GYGTNGHGRQAVQLFDEMKRR 307
>gi|359496160|ref|XP_003635166.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33760-like [Vitis vinifera]
Length = 561
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 84/150 (56%), Gaps = 2/150 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTCLNLTAYTFTPVLGA 85
+YT Q+F I++ D S L + + + F LF M + + + YTFT V+ A
Sbjct: 68 LYTRQLFFSITNPD-SFLFNAIIKASSKFGFSCDAILFYRRMVADSIPQSNYTFTAVIKA 126
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ + A G+ +H+ ++ G DS+ V+ AL+ Y+K G +GE+ + F + + ++ W
Sbjct: 127 CADISALRIGRPIHSHVLVCGYDSDSFVQAALIAFYAKSGDVGEAKKVFDRMPERTIIAW 186
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
N+++S + ++G +KEA G+F M VEF
Sbjct: 187 NSMISGYDQNGFSKEAVGLFYRMRELGVEF 216
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + + NS + Y ++ LF M + + TF VL ACS
Sbjct: 173 KVFDRMPERTIIAWNSMISGYDQNGFSKEAVGLFYRMRELGVEFDSATFVSVLSACSQSG 232
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + G VH ++ D V+ T+L++MY++ G + ++ E F E+ ++VV W A++S
Sbjct: 233 ALDLGCWVHDYIVNNSFDVNVVLGTSLINMYTRCGNVSKAREVFDEMNERNVVAWTAMIS 292
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG +EA +F+ M
Sbjct: 293 GYGMHGYGREAIELFRLM 310
>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03880, mitochondrial; Flags: Precursor
gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ GD NS + + ++ LF M T T VL AC+ L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q H ++K D + ++ AL+DMY K G L +++ F +++ +DV+TW+ ++S
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 152 FLRHGLAKEAFGVFQAM 168
++G ++EA +F+ M
Sbjct: 334 LAQNGYSQEALKLFERM 350
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ+FD++ ++ S + + +Y++ + L M + YT++ VL +C+ +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +H +IK G +S+ V++AL+D+++K G +++ F E+ D + WN+++
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
F ++ + A +F+ M R
Sbjct: 233 GGFAQNSRSDVALELFKRMKR 253
Score = 42.4 bits (98), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 62/137 (45%)
Query: 37 SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGK 96
S D + L S+ R+ P + S L + T++ ++ C + A G
Sbjct: 22 SSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGN 81
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
+ + G + L++MY K+ LL ++ + F ++ ++V++W ++S++ +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 157 LAKEAFGVFQAMTRERV 173
+ ++A + M R+ V
Sbjct: 142 IHQKALELLVLMLRDNV 158
>gi|297738569|emb|CBI27814.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++FD++ D+ N+ + Y + AL+ MH L YTF V+ +C+
Sbjct: 80 YARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCA 139
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG-LLGESVEAFKEIEFKDVVTWN 146
L A GK+VH ++K G DS+ V+++L+ MYS+ G LG + F E+ +++V+W
Sbjct: 140 VLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMEL-VFGEMVVRNIVSWT 198
Query: 147 ALLSSFLRHGLAKEAFGVFQAMT 169
A+++ ++++ KE GVF+ M
Sbjct: 199 AVIAGYVQNRYFKEGLGVFREMV 221
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF E+ ++ S + + Y ++R F +F M + A T VL AC+ L
Sbjct: 185 VFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEF 244
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +H IK G D + + AL+ +Y K G + + F + +++V+WNA++++
Sbjct: 245 LNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAA 304
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+ ++ A +F+ M E+V+F
Sbjct: 305 YEQNNAGANAVKLFRRMQAEKVDF 328
>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
Length = 630
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ GD NS + + ++ LF M T T VL AC+ L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q H ++K D + ++ AL+DMY K G L +++ F +++ +DV+TW+ ++S
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 152 FLRHGLAKEAFGVFQAM 168
++G ++EA +F+ M
Sbjct: 334 LAQNGYSQEALKLFERM 350
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ+FD++ ++ S + + +Y++ + L M + YT++ VL +C+ +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +H +IK G +S+ V++AL+D+++K G +++ F E+ D + WN+++
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
F ++ + A +F+ M R
Sbjct: 233 GGFAQNSRSDVALELFKRMKR 253
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 62/137 (45%)
Query: 37 SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGK 96
S D + L S+ R+ P + S L + T++ ++ C + A G
Sbjct: 22 SSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGN 81
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
+ + G + L++MY K+ LL ++ + F ++ ++V++W ++S++ +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 157 LAKEAFGVFQAMTRERV 173
+ ++A + M R+ V
Sbjct: 142 IHQKALELLVLMLRDNV 158
>gi|255568478|ref|XP_002525213.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535510|gb|EEF37179.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 501
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++F E+ ++ + + + + + LF M ++ L +TFT +L AC+
Sbjct: 161 HKLFHEMPVRNVVTWTAIISGFAQECQVDVCLELFSVMRNSTLKPNDFTFTSLLSACTGS 220
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +G H +I+ G S V AL+ MY K G + ++ F I KD+V+WN+++
Sbjct: 221 GALGQGTSAHCQIIQMGFHSYLHVANALISMYCKSGSVHDAFYIFNNIYSKDIVSWNSMI 280
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +HGLA +A +F+ MT+ V+
Sbjct: 281 SGYAQHGLAMQAIDLFEKMTKLGVK 305
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G Q H L I G S V ++L+ +Y K G L + + F E+ ++VVTW A++S F +
Sbjct: 125 GIQFHCLAITSGFISNSYVGSSLITLYGKCGKLDNAHKLFHEMPVRNVVTWTAIISGFAQ 184
Query: 155 HGLAKEAFGVFQAM 168
+F M
Sbjct: 185 ECQVDVCLELFSVM 198
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 7/148 (4%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ +A+AL Y + V F+ I D+ S NS + Y + LF M
Sbjct: 242 LHVANALISMYCKSGSVHDAFYIFNNIYSKDIVSWNSMISGYAQHGLAMQAIDLFEKMTK 301
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + TF VL AC + G+ M++ + + L+D+ + GL+ E
Sbjct: 302 LGVKPDSITFLGVLSACRHAGFVQGGRNYFNSMVEYHLRPQLDHYSCLVDLLGRAGLIEE 361
Query: 130 SVEAFKEIE-FKDVVTWNALLSSFLRHG 156
+++ + + V W +LLSS HG
Sbjct: 362 ALDIILRMPILPNAVIWGSLLSSCRLHG 389
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QV+D + D S +S + Y++ + LF M + + ++ + +L A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G QVHA + K G +EP V ++L+ MYSK+G + + +AF +I D++ W AL+
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+S+ +HG A EA V+ M +
Sbjct: 726 ASYAQHGKANEALQVYNLMKEK 747
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT---AYTFTP 81
R+ ++VF + ++ N+ + R++N+ A + LF H C+ +YT++
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF---HEMCVGFQKPDSYTYSS 256
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL AC++L GK V A +IK G + + V TA++D+Y+K G + E++E F I
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VV+W +LS + + A A +F+ M VE
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI 349
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 29 THQVF---DEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
+ QVF D+I ++ +N + S+++S+ LF M L ++ +L
Sbjct: 405 SEQVFEDLDDIQRQNI--VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL-- 460
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
S L GKQVH +K G + V ++L +YSK G L ES + F+ I FKD W
Sbjct: 461 -SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACW 519
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
+++S F +G +EA G+F M
Sbjct: 520 ASMISGFNEYGYLREAIGLFSEM 542
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL CS+ P+ RGK++H ++ G D + +AL++MYSK G L + + + +
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
D V+ ++L+S + +HGL ++ F +F+ M
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD I D+ S N + Y + R F + F MH ++ V+ ACSAL
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ 164
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
AP + V IK G VV++AL+D++SK ++ + F++ +V WN +++
Sbjct: 165 APLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIA 224
Query: 151 SFLRHGLAKEAFGVFQAM 168
LR+ F +F M
Sbjct: 225 GALRNQNYGAVFDLFHEM 242
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 14 TCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
C +I D K +VF I + + S L YT+S + + +F M +
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + T T V+ AC QVHA + K G + V AL+ MYSK G + S
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSE 406
Query: 132 EAFK---EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F+ +I+ +++V N +++SF + +A +F M +E
Sbjct: 407 QVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
Length = 1108
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 79/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+ HGD+ S + + + +R+F LF M + +T L C A
Sbjct: 594 VFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTT 653
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +HA + + G +++ V+ AL++MYS G E++ F+ ++ +D+V+WN + ++
Sbjct: 654 LGLGKVIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + GLAKEA +F+ M E V+
Sbjct: 714 YAQAGLAKEAVLLFRQMQLEGVK 736
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S N+ L + ++F F +M ++ +F +L ACS A + G+++H
Sbjct: 401 DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIH 460
Query: 100 ALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEF--KDVVTWNALLSSFLRHG 156
+L++ D E V T L+ MY K G + E+ FKE+ + +VTWN +L ++ ++
Sbjct: 461 SLILTRRRDYVESSVATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQND 520
Query: 157 LAKEAFGVFQAMTRERV 173
+KEAFG M + V
Sbjct: 521 RSKEAFGALMEMLQGGV 537
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNF-PATWALFC 65
M N AK C S+ DA+ VF I D+ S + +Y + R F P +F
Sbjct: 172 MINMYAK-CGSLEDAIA--------VFLAIPEKDVVSWTAMAGAYAQERRFYPDALRIFR 222
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M L TF LGAC++L G +H+L+ + +P+ AL++MY K G
Sbjct: 223 EMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEASLGFDPLASNALINMYGKCG 279
Query: 126 LLGESVEAFKEIEFK---DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ FK + + D+V+WNA++S+ + G +A +F+ + E
Sbjct: 280 DWEGAYSVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLE 328
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + DL S N +Y ++ LF M + TF+ L
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALV 755
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GK HAL + G DS+ V T L+ +Y+K G L E++ F+ VV NA++ +
Sbjct: 756 SDGKLFHALAAESGLDSDVSVATGLVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGAL 815
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+HG ++EA +F M +E V
Sbjct: 816 AQHGFSEEAVKMFWKMQQEGV 836
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+T +L +C +GK H L+ G + + L++MY + G L E+ F ++E
Sbjct: 28 YTALLQSCVDSNDLAKGKHAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++VV+W AL+S+ + G AF +F+ M E
Sbjct: 88 ERNVVSWTALISANAQCGAFARAFALFRTMLLE 120
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSA 88
H +F ++ ++ S + + + + F +ALF M + +YT +L AC+
Sbjct: 80 HAIFSKMEERNVVSWTALISANAQCGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN 139
Query: 89 LPAPERGKQVHALMIKGGTD----SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
G+ +HA++ + G + + +V A+++MY+K G L +++ F I KDVV+
Sbjct: 140 SRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKCGSLEDAIAVFLAIPEKDVVS 199
Query: 145 WNALLSSF 152
W A+ ++
Sbjct: 200 WTAMAGAY 207
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A +FT VL +C + + + +++ G S ++TAL+ M+ + L ++ F
Sbjct: 541 ALSFTSVLSSCYC---SQEAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFN 596
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E++ DVV+W A++S+ + KE +F+ M E V
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGV 634
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + D+ + N+ + Y + LF M TF +L AC+ L
Sbjct: 219 KVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACTNLE 278
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSK-YGLLGESVEAFKEIEFKDVVTWNALL 149
E+G+ +H + + G +S+ V+ L++MY+K L E+ + F+ + +DV+TWN L+
Sbjct: 279 DLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILI 338
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+++++G AK+A +F+ M E V
Sbjct: 339 VAYVQYGQAKDALDIFKQMQLENV 362
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 76/141 (53%), Gaps = 3/141 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC---LNLTAYTFTPVLGACS 87
+ FDE+ L + N+ + Y+R+ + ++ M S + A TF+ L AC+
Sbjct: 115 KTFDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACT 174
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ +G+++ A + G S+ +V+ AL++MYSK G L + + F ++ +DV+ WN
Sbjct: 175 VVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNT 234
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S + + G A +A +FQ M
Sbjct: 235 MISGYAKQGAATQALELFQRM 255
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + D+ + N + +Y + +F M + T + VL AC+ L
Sbjct: 321 QVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLG 380
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +GK VHAL+ G ++ V++ +LM+MY++ G L ++V F I K +V+W+ L++
Sbjct: 381 AKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIA 440
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ +HG ++ F + +E
Sbjct: 441 AYAQHGHSRTGLEHFWELLQE 461
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 80/161 (49%), Gaps = 9/161 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ADAL VF I H + S + ++ R+ ++ + M L
Sbjct: 5 CGSVADALA--------VFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRP 56
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEA 133
F +G CS+ ++G+ +HA++++ + + ++ TAL+ MY++ L + +
Sbjct: 57 DGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKT 116
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F E+ K +VTWNAL++ + R+G + A ++Q M + E
Sbjct: 117 FDEMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPE 157
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
MY K G + +++ F IE + V+W ++++F R+G +EA G ++ M E
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLE 52
>gi|410110029|gb|AFV61094.1| pentatricopeptide repeat-containing protein 81, partial [Lippia
origanoides]
Length = 363
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 18 IADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I++AL Y+ ++ ++F I+ DL S N+ L +++ LF +H
Sbjct: 195 ISNALVSMYLKSNSRNVEDALKIFKHINVKDLVSWNTILTGLSQNGLSENALRLFQNIHL 254
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L YTF VL +CS L G+Q+H L++K G + V +AL+ MYSK G++ +
Sbjct: 255 DHLVTDQYTFAAVLRSCSDLATLHLGRQIHVLVVKSGFEGNEYVASALIFMYSKCGIIED 314
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ +F+ + VTWN+++ ++ +HG K A +F MT ++
Sbjct: 315 AWGSFESSHKETSVTWNSIIFAYAQHGQGKIALDLFYLMTERCIKL 360
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 31 QVFDEISHG--DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD S G DL + NS L +Y + +F M L + AYT + V+ AC
Sbjct: 112 RVFDS-SDGYWDLVTWNSMLAAYLEHNLDEYGFNIFLEMVRQRLEMDAYTLSSVISACFE 170
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL--LGESVEAFKEIEFKDVVTWN 146
GK +H +IK G D + AL+ MY K + ++++ FK I KD+V+WN
Sbjct: 171 DTQQSLGKSLHGFVIKKGLDQLTQISNALVSMYLKSNSRNVEDALKIFKHINVKDLVSWN 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+L+ ++GL++ A +FQ +
Sbjct: 231 TILTGLSQNGLSENALRLFQNI 252
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VF + + S N+ + Y N ALF M + + TF P+L
Sbjct: 4 RRVEDANKVFKYMRERNAVSWNALIGGYAEMGNLERCVALFVGMEMEGVGVDDATFAPIL 63
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDV 142
+ + + +Q+H ++K G + E V A + Y++ G + ++ F + + D+
Sbjct: 64 SLLNDAESYDLTRQLHGKIMKRGLEYENTVLNATITAYAECGCIEDAKRVFDSSDGYWDL 123
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VTWN++L+++L H L + F +F M R+R+E
Sbjct: 124 VTWNSMLAAYLEHNLDEYGFNIFLEMVRQRLE 155
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 72/143 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEI ++ S + + Y S F LF + L ++T +L ACS +
Sbjct: 158 KVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVG 217
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ + M + G+ V T+L+DMY+K G + E+ F + KDVV W+AL+
Sbjct: 218 DLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCWSALIQ 277
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +G+ KEA VF M RE V
Sbjct: 278 GYASNGMPKEALDVFFEMQRENV 300
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF + H ++ N+ + + F +++ M +TF VL AC+
Sbjct: 53 YATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACT 112
Query: 88 ALPAP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
LP G +H+L+IK G D + VKT L+ +YSK G L ++ + F EI K+VV+W
Sbjct: 113 RLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWT 172
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++ ++ G EA G+F+ +
Sbjct: 173 AIICGYIESGCFGEALGLFRGL 194
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ ++ + Y + +F M + Y V ACS L
Sbjct: 259 RVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLG 318
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G LM S PV+ TAL+D Y+K G + ++ E FK + KD V +NA++S
Sbjct: 319 ALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVIS 378
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
G AFGVF M +
Sbjct: 379 GLAMCGHVGAAFGVFGQMVK 398
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FD +S D+ S + + SY+++ F LF M + + T VL AC
Sbjct: 261 VAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSAC 320
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + + G+ H + K ++ V AL+DMY K G++ +++E FKE+ KD V+W
Sbjct: 321 AHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWT 380
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++S +G A A F M RE V+
Sbjct: 381 SIISGLAVNGFADSALDYFSRMLREVVQ 408
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
P + H +F +I L N + ++ S ++ M+ L T+ +
Sbjct: 24 PSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRMYNLMYRQGLLGNNLTYLFL 83
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
AC+ +P G +HA ++K G +S V AL++MY G LG + + F E+ +D+
Sbjct: 84 FKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDL 143
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+WN+L+ + + +E GVF+AM
Sbjct: 144 VSWNSLVCGYGQCKRFREVLGVFEAM 169
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFDE+ DL S NS + Y + + F +F M + A T V+ AC++L
Sbjct: 132 QKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKVVLACTSL 191
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ + + + + + L+DMY + GL+ + F +++++++V+WNA++
Sbjct: 192 GEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMI 251
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ + G A +F AM++ V
Sbjct: 252 MGYGKAGNLVAARELFDAMSQRDV 275
>gi|302765332|ref|XP_002966087.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
gi|300166901|gb|EFJ33507.1| hypothetical protein SELMODRAFT_84768 [Selaginella moellendorffii]
Length = 449
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + H D S + + + T + LF M+ + T+ T VL AC+
Sbjct: 32 KVFDAMDHPDAFSWTNMITACTENCELLEALELFHRMNLEGIPPTSVTLASVLNACACSG 91
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+H+ + G S + +TAL+DMY+K G L S + F +E ++ V+W A+++
Sbjct: 92 ALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGSLECSSKVFTAMETRNSVSWTAMIA 151
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ +HG EA +F+ M E
Sbjct: 152 ALAQHGQGDEALELFKEMNLE 172
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + H L S N + Y+++ LF M S + V GACS L A
Sbjct: 465 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 524
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK++H +K + V ++++DMY+K G +G S F + KDV +WN +++
Sbjct: 525 LRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAG 584
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG KEA +F+ M R
Sbjct: 585 YGIHGRGKEALELFEKMLR 603
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 1/141 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACS 87
+ VFD++ +L N+ + +YTR+ F ++F + S T +T V+ AC+
Sbjct: 53 SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA 112
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L G+ +H + K S+ V AL+ MY K GL+ E+V+ F+ + +++V+WN+
Sbjct: 113 GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNS 172
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ F +G +E+F F+ M
Sbjct: 173 IICGFSENGFLQESFNAFREM 193
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 75/146 (51%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VFD + +SS N+ L Y ++ + L+ M + L+ +T +L ACS
Sbjct: 361 SERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSR 420
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + G+++H ++ G +P + +L+ +Y G + F +E + +V+WN +
Sbjct: 421 MKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVM 480
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
++ + ++GL EA +F+ M + ++
Sbjct: 481 IAGYSQNGLPDEAINLFRQMLSDGIQ 506
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL C+ E+G VH L +K G + E +V +L+DMYSK L E+ F +
Sbjct: 206 TLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKN 265
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ K++V+WN+++ + R F + Q M E
Sbjct: 266 DKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTE 299
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT--PVLGACSAL 89
+FD+ ++ S NS + Y R + T+ L M + + A FT VL C
Sbjct: 261 LFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLER 320
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ K++H + G S +V A + Y++ G L S F ++ K V +WNALL
Sbjct: 321 SELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALL 380
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
+ ++ ++A ++ MT
Sbjct: 381 CGYAQNSDPRKALDLYLQMT 400
Score = 43.1 bits (100), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
+L AC E G+++H M+ T ++ V+ T ++ MYS G +S F ++
Sbjct: 4 LLQACGQRKDIEVGRRLHE-MVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K++ WNA++S++ R+ L ++A +F +
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSEL 91
Score = 42.0 bits (97), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++FD + D++S N + Y LF M L +TFT +L ACS
Sbjct: 563 SQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 622
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E G + M+ + EP ++ T ++DM + G + +++ +E+ D W
Sbjct: 623 AGLVEDGLEYFNQMLN-LHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIW 681
Query: 146 NALLSSFLRHG 156
++LLSS HG
Sbjct: 682 SSLLSSCRIHG 692
>gi|224065565|ref|XP_002301860.1| predicted protein [Populus trichocarpa]
gi|222843586|gb|EEE81133.1| predicted protein [Populus trichocarpa]
Length = 933
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 80/143 (55%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+++ D+ S + + Y++++ F +F M ++ T V+ AC+ L A
Sbjct: 199 LFNQMPARDIISWTTMINCYSQNKRFREALGVFNEMAKHGISPDEVTMATVISACAHLGA 258
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK++H +++ G + + + +AL+DMY+K G L S+ F ++ K++ WN+++
Sbjct: 259 LDLGKEIHYYIMQHGFNLDVYIGSALIDMYAKCGSLDRSLLMFFKLREKNLFCWNSVIEG 318
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG A+EA +F M RE+++
Sbjct: 319 LAVHGYAEEALAMFDKMEREKIK 341
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + + +S L+ M ++ T+YTF ++ AC + + VH + +
Sbjct: 49 NAMIKGFVQSYQPVQALELYVQMLRANVSPTSYTFPSLIKACGLVSQLRFAEAVHGHVWR 108
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G DS V+T+L+D YS G + ESV F E+ +DV W ++S +R G A +
Sbjct: 109 NGFDSHVFVQTSLVDFYSSMGRIEESVRVFDEMPERDVFAWTTMVSGLVRVGDMSSAGRL 168
Query: 165 FQAM 168
F M
Sbjct: 169 FDMM 172
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM-DM 120
A+F M + TF VL AC+ E G++ A M + + V M D+
Sbjct: 330 AMFDKMEREKIKPNGVTFVSVLSACNHAGLIEEGRKRFASMTRDHSIPPGVEHYGCMVDL 389
Query: 121 YSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRH 155
SK GLL E+++ + ++ + + V W ALLS H
Sbjct: 390 LSKAGLLEEALQLIRTMKLEPNAVIWGALLSGCKLH 425
>gi|15233645|ref|NP_195514.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213618|sp|Q9SZK1.1|PP355_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g38010
gi|4467107|emb|CAB37541.1| putative protein [Arabidopsis thaliana]
gi|7270784|emb|CAB80466.1| putative protein [Arabidopsis thaliana]
gi|332661463|gb|AEE86863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 19 ADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STC 71
+AL YV Q VF E+ D S NS + LF M S+
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + T VL AC++L A + G+ VH ++ G + + TA++DMY+K G + ++
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E F I K+V TWNALL HG E+ F+ M +
Sbjct: 362 EIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA--- 133
+TF PV AC GKQ+H ++ K G + V+ +L+ YG+ GES A
Sbjct: 107 FTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHF---YGVCGESRNACKV 163
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ +DVV+W +++ F R GL KEA F M E
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE 201
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ D+ S + +TR+ + F M + T+ VL + +
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVG 218
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK +H L++K + AL+DMY K L +++ F E+E KD V+WN+++S
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +KEA +F M
Sbjct: 279 GLVHCERSKEAIDLFSLM 296
>gi|347954464|gb|AEP33732.1| chlororespiratory reduction 21, partial [Draba nemorosa]
Length = 829
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI + + N+ + Y ++ L M
Sbjct: 202 CVFVASSLADMYGKCGLLDDARKVFDEIPDRTVVAWNALMVGYVQNGMNQEAIRLLSAMR 261
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ + T T + L A + + E GKQ HA+ I G + + ++ T++++ Y K GL+
Sbjct: 262 NEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIE 321
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL ++A + Q M R + F
Sbjct: 322 YAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNF 368
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH + K G V ++L DMY K GLL ++ + F EI +
Sbjct: 174 VCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGLLDDARKVFDEIPDRT 233
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VV WNAL+ ++++G+ +EA + AM E +E
Sbjct: 234 VVAWNALMVGYVQNGMNQEAIRLLSAMRNEGIE 266
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ + N + Y + + M LN T + ++ A +
Sbjct: 322 YAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRRGNLNFDCVTLSSLMSAAA 381
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ G S+ V+ + ++MY+K G + ++ + F KD++ WN
Sbjct: 382 RTHNLKLGKEVQCYCIRHGFVSDIVLASTAVEMYAKCGSIVDAKKVFNSTVEKDLILWNT 441
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 442 LLAAYAEPGLSGEALRLFYEMQLEGV 467
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L L ++ T L AC+ L + G+ +H +I+ S V ++T+L+DMY+K G
Sbjct: 532 MQESGLRLNVFSITVALSACANLASLHFGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCG 591
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ F + ++ +NA++S++ +G KEA +++++ +
Sbjct: 592 DISKAERVFGSKLYSELPLYNAMISAYALYGNVKEATALYRSLDED 637
>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
Length = 611
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 77/146 (52%), Gaps = 2/146 (1%)
Query: 31 QVFDEISH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSA 88
+VFD I H D N+ + +Y + L+ MH T L TF V+ C+
Sbjct: 192 KVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVCAE 251
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A ++G+ +HA + D+ +V AL+ MY K G L E+++ F ++ KD ++WN +
Sbjct: 252 LSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLKDEISWNTI 311
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+SS+ HG + +A ++Q M + V+
Sbjct: 312 ISSYAYHGHSDQALLLYQEMDLQGVK 337
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 61/95 (64%), Gaps = 3/95 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAF 134
++F+ + ACS L E+G+++H ++ + G + + VV TAL++MYSK G L E+ + F
Sbjct: 135 FSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCGDLEEARKVF 194
Query: 135 KEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
I D V WNA+++++ +HG K+A ++++M
Sbjct: 195 DSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSM 229
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 48/76 (63%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
++G+++H G VV TA++ MY K G L ++ AF+E+++K+ VTWNA+++++
Sbjct: 48 DQGREIHRYARISGLLPNVVVGTAVISMYGKCGRLDDARAAFEELQWKNSVTWNAMMTNY 107
Query: 153 LRHGLAKEAFGVFQAM 168
G +EA +F+ M
Sbjct: 108 KLDGRDREALELFREM 123
>gi|357128676|ref|XP_003565996.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Brachypodium distachyon]
Length = 873
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +FDE+ H D+ S + + ++TR + LF + S+ + + + VL C+
Sbjct: 119 HNLFDEMPHRDVVSWCTIIAAHTRRGLWVEAIGLFKGLLSSEVKANRFVISSVLKTCARS 178
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G VH L+IK G + V+ +DMY+K G +G S+ F EI K V WNA++
Sbjct: 179 GVMELGLMVHGLVIKSGLGVDRFVEVGFVDMYAKCGNVGYSLRIFNEIPLKRSVAWNAMI 238
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
S F+ + EA + + M R
Sbjct: 239 SGFVENDCIVEAAEICRDMHR 259
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 46 SQLFSYTR-SRNFPATWA----------------LFCYMHSTCLNLTAYTFTPVLGACSA 88
++LFSYT RN T A LFC + + L +T + VLGAC+
Sbjct: 520 AELFSYTLLPRNLVVTNAMLSGFCWNFLPEKALLLFCSEYQSGLRPDHFTCSTVLGACAD 579
Query: 89 LPAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ A + G+Q+H +IK G++ + +V A++D+Y K G + + F + + ++
Sbjct: 580 IGAKDSGEQIHGYLIKIGSEYMDVIVGNAIIDLYVKCGCIASACRFFHSMRSWSMNSYAM 639
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L+ ++++ + EA +F M
Sbjct: 640 LMLGYIQNRCSDEALQLFSKM 660
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A + +L C+ VH ++K G + +V L+D Y+K G L F
Sbjct: 64 ARLYVRLLRRCALDALAAGAGAVHGHVLKRGFAPDTLVSNVLLDTYAKGGSLAACHNLFD 123
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
E+ +DVV+W ++++ R GL EA G+F+ + V+
Sbjct: 124 EMPHRDVVSWCTIIAAHTRRGLWVEAIGLFKGLLSSEVK 162
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
+ Y ++R LF M + L TF +L C+ L A + G+Q+HA +IK G
Sbjct: 641 MLGYIQNRCSDEALQLFSKMQHSGLRANRVTFARILRGCADLCAIDLGRQLHASIIKMGL 700
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
S+ V AL+ MY K + ES +EI
Sbjct: 701 ISDVYVANALLGMYKKSDSMMESKRDSREI 730
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LFC + L L VL C E QVHA +K G V AL+ +YS
Sbjct: 358 LFC----SGLCLREGDLVTVLDVCHT---KEEVLQVHAYALKSGGVFYVNVCNALISVYS 410
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ GL+ ++ FK + +DVV+W A+++ +++ ++AFG F+ +
Sbjct: 411 ELGLVMDAEAIFKSMYSRDVVSWAAVMAGCVKNLQFEKAFGYFRGL 456
Score = 45.1 bits (105), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + D+ S + + ++ F + F + ++ +L + ++ C+ L
Sbjct: 421 IFKSMYSRDVVSWAAVMAGCVKNLQFEKAFGYFRGLRNSGASLDQHCIGTIINICTGLQD 480
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLS 150
++G+Q+HAL +K G + +L++MY+K + + E F +++V NA+LS
Sbjct: 481 MDKGQQIHALALKVGLLVVDFISASLVNMYAKCHHIECAAELFSYTLLPRNLVVTNAMLS 540
Query: 151 SFLRHGLAKEAFGVF 165
F + L ++A +F
Sbjct: 541 GFCWNFLPEKALLLF 555
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC----LNLTAYTFTPVLG 84
+ FD I ++ S NS + +Y R + + S C L YTF P+L
Sbjct: 73 SRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILK 132
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC +L GK+VH + K G + + V +L+ +YS+YG+L + + F ++ KDV +
Sbjct: 133 ACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS 189
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
WNA++S F ++G A A GV M E V+
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKM 220
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTCLNLTAY--TFTPVLGAC 86
H VFD++ D S N+ + YT+ N A+ A+ Y M C + T+ ++ A
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQ--NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S + A ++G ++HA +IK + V T L+D+Y K G L +++ F EI V WN
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWN 496
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A+++S HG +EA +F+ M ERV+
Sbjct: 497 AIIASLGIHGRGEEALQLFKDMLAERVK 524
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 72/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF ++ D+ S N+ + + ++ N + M + + T +L C+
Sbjct: 176 HKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G +H ++K G DS+ V AL++MYSK+G L ++ F ++E +D+V+WN+++
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+++ ++ A F+ M
Sbjct: 296 AAYEQNNDPSTALRFFKGM 314
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFD++ DL S NS + +Y ++ + F M + T + S L
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336
Query: 90 PAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + +I+ D + V+ AL++MY+K G + + F ++ KD ++WN L
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
++ + ++GLA EA + M R
Sbjct: 397 VTGYTQNGLASEAIDAYNMMEECR 420
>gi|347954478|gb|AEP33739.1| chlororespiratory reduction 21, partial [Matthiola sinuata]
Length = 794
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFD I + + N+ + Y ++ L M
Sbjct: 171 CVFVASSLADMYGKCGVLDDARKVFDYIPDRNAVAWNALMVGYVQNGMNEEAIRLLSEMR 230
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GKQ HA+ I G + + ++ T++++ Y K GL+
Sbjct: 231 KEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLIE 290
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL +EA + Q M RE ++F
Sbjct: 291 YAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKF 337
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 68/146 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ + N + Y + + M L T + ++ A +
Sbjct: 291 YAEMIFDGMIEKDVVTWNLLISGYVQQGLVEEAIYMCQLMRRENLKFDCVTLSTLMSAAT 350
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + GK++ I+ G +S+ V+ + +DMY+K G + + + F KD++ WN
Sbjct: 351 STQNLKLGKEIQCYCIRHGLESDIVLASTAVDMYAKCGSIVNAKKVFDSTVQKDLILWNT 410
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LLS++ GL+ EA +F M E V
Sbjct: 411 LLSAYADSGLSGEALRLFYEMQLESV 436
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH + K G V ++L DMY K G+L ++ + F I ++
Sbjct: 143 VCKACGALQWSRFGRGVHGYVAKAGLHHCVFVASSLADMYGKCGVLDDARKVFDYIPDRN 202
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V WNAL+ ++++G+ +EA + M +E +E
Sbjct: 203 AVAWNALMVGYVQNGMNEEAIRLLSEMRKEGIE 235
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 57/103 (55%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYG 125
M + L A+T T L AC+ L + G+ +H +I+ S ++T+L+DMY+K G
Sbjct: 501 MQESRLRPNAFTITVALSACANLASLHFGRSIHGYIIRNQQYSFSASIETSLVDMYAKCG 560
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ F ++ +NA++S++ +G +EA +++++
Sbjct: 561 DINKAERVFGSKLCSELPLYNAMISAYALYGKVREAITLYRSL 603
>gi|224133278|ref|XP_002321528.1| predicted protein [Populus trichocarpa]
gi|222868524|gb|EEF05655.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ Q+F+EI + +L + N + + F +F M + TF +L ACSA
Sbjct: 142 SRQLFEEIPNPELVAWNIIIDCHVSCGKFNEALEMFSRMLKFGIEPDEATFVVILSACSA 201
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A + G+ VH+ + G V +L+DMY+K G L E+ E F + K+ VTWN +
Sbjct: 202 LGALDFGRWVHSCISNIGHGCITEVNNSLLDMYAKCGALQEAFEIFNGMNKKNTVTWNTM 261
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+ HG A EA +F M +++
Sbjct: 262 ILGLASHGYANEALALFSNMLEQKL 286
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF++I D N+ + + ++ + + + M L ++TF+ +L C
Sbjct: 40 YAVSVFEKIGDPDAFIFNTMIRGFGKANDPRKAFDYYKRMQERGLVSDSFTFSFLLKVCG 99
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L G+ +H +K G +S V+ L+ MY + + S + F+EI ++V WN
Sbjct: 100 QLGLVLLGRLMHCSTLKRGLNSHVFVRNTLVHMYGTFKDIEASRQLFEEIPNPELVAWNI 159
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ + G EA +F M + +E
Sbjct: 160 IIDCHVSCGKFNEALEMFSRMLKFGIE 186
>gi|224140139|ref|XP_002323442.1| predicted protein [Populus trichocarpa]
gi|222868072|gb|EEF05203.1| predicted protein [Populus trichocarpa]
Length = 526
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 79/145 (54%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF E+ ++ S + + + + L+C M ++ L +TFT +L AC+
Sbjct: 183 YKVFKEMPVRNVVSWTAIISGFAQDWQVDMCLQLYCLMRNSTLKPNDFTFTSLLSACTGS 242
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +G+ H +I+ G S + AL+ MY K G + ++ F+ + KD+V+WN+++
Sbjct: 243 GALGQGRSAHCQIIEMGFVSYLHIANALVSMYCKCGNVEDAFHIFENMVGKDIVSWNSMI 302
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ + +HGLA + G+F+ M + V+
Sbjct: 303 AGYAQHGLAVQGIGLFERMKSQGVK 327
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
++T L+ A + + +C++ G Q H L I G + + ++L+ Y K G L
Sbjct: 120 NATSLSFDASVLSNAVSSCASTRDLRGGIQYHCLAISAGFIANAYIGSSLVTFYGKCGEL 179
Query: 128 GESVEAFKEIEFKDVVTWNALLSSF 152
+ + FKE+ ++VV+W A++S F
Sbjct: 180 DNAYKVFKEMPVRNVVSWTAIISGF 204
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 7/151 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC----LNLTAYTFTPVLG 84
+ FD I ++ S NS + +Y R + + S C L YTF P+L
Sbjct: 73 SRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILK 132
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC +L GK+VH + K G + + V +L+ +YS+YG+L + + F ++ KDV +
Sbjct: 133 ACVSLV---DGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGS 189
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
WNA++S F ++G A A GV M E V+
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKM 220
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTCLNL--TAYTFTPVLGAC 86
H VFD++ D S N+ + YT+ N A+ A+ Y M C + T+ ++ A
Sbjct: 379 HTVFDQLPRKDTISWNTLVTGYTQ--NGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAY 436
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S + A ++G ++HA +IK + V T L+D+Y K G L +++ F EI V WN
Sbjct: 437 SHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPRDTSVPWN 496
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A+++S HG +EA +F+ M ERV+
Sbjct: 497 AIIASLGIHGRGEEALQLFKDMLAERVK 524
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 72/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF ++ D+ S N+ + + ++ N + M + + T +L C+
Sbjct: 176 HKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQS 235
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G +H ++K G DS+ V AL++MYSK+G L ++ F ++E +D+V+WN+++
Sbjct: 236 DDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSII 295
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+++ ++ A F+ M
Sbjct: 296 AAYEQNNDPSTALRFFKGM 314
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 66/144 (45%), Gaps = 1/144 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFD++ DL S NS + +Y ++ + F M + T + S L
Sbjct: 277 QMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLTSIFSQL 336
Query: 90 PAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + +I+ D + V+ AL++MY+K G + + F ++ KD ++WN L
Sbjct: 337 SDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTISWNTL 396
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
++ + ++GLA EA + M R
Sbjct: 397 VTGYTQNGLASEAIDAYNMMEECR 420
>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 770
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Query: 51 YTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE 110
+ RSR F A +F + + + +TF+ +L CS + A E+G+Q+HA IK G S+
Sbjct: 369 HARSRGFQA-LKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTGFLSD 427
Query: 111 PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
VV +AL++MY+K G + + +AF E+ + +VTW +++S + +HG +A +F+ M
Sbjct: 428 VVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFEDM 485
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FDE+ ++ + + + YT + +F M + YT +L AC A
Sbjct: 134 NLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGMLSACVASH 193
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQVH IK G S + +L +Y+K G L + AFK I K+V+TW ++S
Sbjct: 194 NIDLGKQVHGYTIKYGAASITSIGNSLCRLYTKSGNLESGIRAFKRIPDKNVITWTTMIS 253
Query: 151 S 151
+
Sbjct: 254 A 254
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T T V+ C GKQV K G + VK + M +Y + G E++ F+E
Sbjct: 282 FTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEE 341
Query: 137 IEFKDVVTWNALLSSF 152
+E V+TWNA++S F
Sbjct: 342 MEDNSVITWNAMISGF 357
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ P+L C + K +H M+K GT + V T+L+++Y + G ++ F E+
Sbjct: 81 YVPLLHRCIETGSLGGAKALHGHMVKTGTIVDIFVATSLVNVYMRCGNSQDARNLFDEMP 140
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
K+VVTW AL++ + + A VF M +
Sbjct: 141 EKNVVTWTALITGYTLNSQPVLALEVFVEMLK 172
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
+ C IA+A +VFD I D+ + N+ + Y ++ +LF M +
Sbjct: 300 EKCGEIAEA--------RRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGM 351
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
T VL ACSA+ A E G ++ + G S V TAL+DMY+K G L +++E
Sbjct: 352 RPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIE 411
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+++ K+V +WNAL+ +G EA FQ M E
Sbjct: 412 VFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNE 450
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF +M + + +YT +L A + PAP + HAL+ K G + +L+ MYS
Sbjct: 139 LFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYS 198
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G + + F I +DVV+WNA++ ++ R G+ E +F+ M +E
Sbjct: 199 YLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKE 247
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +V +AL+ MY K G + E+ F I KD+V WNA+++ + ++G++ EA +F +M
Sbjct: 288 DSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSM 346
>gi|449458231|ref|XP_004146851.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
gi|449522932|ref|XP_004168479.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g17630-like [Cucumis sativus]
Length = 705
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 66/125 (52%)
Query: 46 SQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG 105
S L S+ R + T LFC M + TA VL C+ L G+ +H M+KG
Sbjct: 245 SLLSSHARCGHLEETMVLFCKMRMKGVGPTAEMLAVVLSVCADLATLNSGQMIHGYMVKG 304
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
G + K AL+ +Y K G +G++ + F E++ K++V+WNAL+SSF G+ +A +
Sbjct: 305 GFNDYLFAKNALITLYGKGGGVGDAEKLFHEMKVKNLVSWNALISSFAESGVYDKALELL 364
Query: 166 QAMTR 170
+ +
Sbjct: 365 SQLEK 369
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F M + + T VL C+ L A G+++H +I+ D +V L++MY+
Sbjct: 402 VFRKMQLANVKANSVTIASVLSICAMLAALNLGREMHGHVIRARMDDNVLVGNGLINMYT 461
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
K G F+++E +D ++WN++++ + HGL K+A F M +
Sbjct: 462 KCGSFKPGFMVFEKLENRDSISWNSMIAGYGTHGLGKDALATFNHMIK 509
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
+TF +L A S L A K +H +++ G + V L+ MY+K + ++ + F
Sbjct: 139 GFTFPLLLRASSNLGAFNMCKNLHCHVVQFGFQNHLHVGNELIGMYAKLERMDDARKVFD 198
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ K VV+WN ++S + + A +F M E VE
Sbjct: 199 KMRIKSVVSWNTMVSGYAYNYDVNGASRMFHQMELEGVE 237
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F +L C+ + + KQVH+ + G V L+ +YS+YGL+ ++ + F
Sbjct: 41 FDHLLRQCNGI---QHSKQVHSATVVTGAYCSAFVSARLVSIYSRYGLVSDARKVFGSAP 97
Query: 139 FK---DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F+ + + WN+++ + + HG EA ++ M
Sbjct: 98 FECYSNFLLWNSIIRANVYHGYCIEALQLYGKM 130
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 77/147 (52%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FD++ H D+ S S + SY+++ F LF M T + T VL AC
Sbjct: 979 VAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSAC 1038
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + A + G+ VH + K +++ V AL+DMY K G + + + F+E+ +D V+W
Sbjct: 1039 AHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWT 1098
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
++++ +G A A +F M RE V
Sbjct: 1099 SVIAGLAVNGSADSALNLFSLMLREGV 1125
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 65/146 (44%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VFDE+S DL S NS + Y R R + +F M + A T V+ AC+
Sbjct: 848 FARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLACT 907
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + + + + + + L+DMY + ++ + F + +++V+WNA
Sbjct: 908 VLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNA 967
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++ + + G A +F M V
Sbjct: 968 MIMGYGKAGNLVAARKLFDDMPHRDV 993
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
P + +++F +I LS N + ++++ + M+S L T+ +
Sbjct: 743 PTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYSQALFGNNLTYPFL 802
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC+ + VHA ++K G DS+ V AL+ Y+ + LG + + F E+ +D+
Sbjct: 803 LKACARISNVS-CTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDL 861
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM 168
V+WN+L+ + R E VF+ M
Sbjct: 862 VSWNSLICGYGRCRRYSEVLVVFEEM 887
Score = 38.1 bits (87), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+ D S S + + + + LF M + T TF VL AC+
Sbjct: 1085 VFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHAGV 1144
Query: 92 PERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
++G + M + G E ++D+ S+ G LG + E K + DVV W LL
Sbjct: 1145 VDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRILL 1204
Query: 150 SSFLRHG 156
S+ HG
Sbjct: 1205 SASQVHG 1211
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 81/139 (58%), Gaps = 6/139 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD++ +L S +S + RS A+W+ + S + ++ +TF +L A + +
Sbjct: 410 KAFDQLYERNLLSTSSDIGETGRSN---ASWS--SQIESMDVGVSTFTFASLLSAAATVG 464
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
P +G+Q+HAL IK G +S+ + +L+ MYS+ G L ++ AF E+E +V++W +++
Sbjct: 465 LPTKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSII 524
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S+ +HG A+ A +F M
Sbjct: 525 SALAKHGHAERALSLFHDM 543
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE--- 132
YT + ++ AC+ + G+Q+H+L+++ G S+ V L+DMY+K + +S+E
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKL-QMEQSMECAR 307
Query: 133 -AFKEIEFKDVVTWNALLSSFLR-HGLAKEAFGVFQAMTRERVE 174
FK + +V++W AL+S +++ G A + M E +E
Sbjct: 308 KVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIE 351
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 48/82 (58%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
L C M + + T++ +L AC+ L + G+Q+HA ++K + VV AL+ MY+
Sbjct: 341 LLCEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYA 400
Query: 123 KYGLLGESVEAFKEIEFKDVVT 144
+ G + E+ +AF ++ +++++
Sbjct: 401 ESGCMEEARKAFDQLYERNLLS 422
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 7/149 (4%)
Query: 31 QVFDEISH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + DL S + F TR+ L M + L A+T AC
Sbjct: 100 RVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHAC--F 157
Query: 90 PAP---ERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
P G V IK G ++ V AL+DM+++ G L + + F + + VV W
Sbjct: 158 PGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFARNGDLVAARKVFNGLVERTVVVW 217
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ +++ G A +A +F M + E
Sbjct: 218 TLMITRYVQGGCAGKAVELFLGMLEDGFE 246
>gi|242041211|ref|XP_002468000.1| hypothetical protein SORBIDRAFT_01g037840 [Sorghum bicolor]
gi|241921854|gb|EER94998.1| hypothetical protein SORBIDRAFT_01g037840 [Sorghum bicolor]
Length = 583
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+Q+F + DL S NS + RS + LF + S+ L ++F+ VL AC+
Sbjct: 28 YQIFKRMPVKDLVSWNSMIAGAVRSSHLKEAMYLFSRLVSSGLVPDCFSFSSVLSACARA 87
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G VH LM + G + ++ +AL+DMY+K G + + E F +++ + WN ++
Sbjct: 88 GARRYGVWVHHLMTELGVEMNHILTSALVDMYAKCGRIDVATEIFNKVKRNHISVWNTMI 147
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S HGL + +F M E +
Sbjct: 148 SGLASHGLGSDVVILFHKMKSEEL 171
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 56/131 (42%), Gaps = 2/131 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+++ +S N+ + LF M S L TF +L ACS
Sbjct: 130 EIFNKVKRNHISVWNTMISGLASHGLGSDVVILFHKMKSEELVPDGVTFVALLTACSHCG 189
Query: 91 APERGKQVHALMIKGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E +Q M + + V AL+D S+ GLL E+ + + K DVV W AL
Sbjct: 190 MVEEARQYFRSMTTEYSITPEVEHYGALVDTLSRAGLLDEAYKLVMSMNVKPDVVIWRAL 249
Query: 149 LSSFLRHGLAK 159
LS+ R+ K
Sbjct: 250 LSACRRYRQTK 260
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
M++ TD P ++ + K G L ++ + FK + KD+V+WN++++ +R KEA
Sbjct: 1 MLEWSTD--PFHGNLMLMGFLKSGQLDKAYQIFKRMPVKDLVSWNSMIAGAVRSSHLKEA 58
Query: 162 FGVFQAMT 169
+F +
Sbjct: 59 MYLFSRLV 66
>gi|302762022|ref|XP_002964433.1| hypothetical protein SELMODRAFT_82035 [Selaginella moellendorffii]
gi|300168162|gb|EFJ34766.1| hypothetical protein SELMODRAFT_82035 [Selaginella moellendorffii]
Length = 490
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 8/155 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA ++F + H D+ + N+ L +Y + LF M +
Sbjct: 203 CGSIHDA--------EEMFFRMEHRDVVAWNAMLSAYAHNGYELEAAKLFQEMEHEGVKA 254
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
F +L ACS L E+GK VH + + G ++E V+ AL+++Y K G L E+ F
Sbjct: 255 DRVVFVSLLEACSKLGDLEQGKVVHGRVTELGFEAEDVLGHALVNLYGKCGALEEARSLF 314
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+I K+VV+WN L++++L++GL ++A +F M
Sbjct: 315 GKIVSKNVVSWNVLITAYLQNGLVEDALKLFTEMA 349
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD I ++ S + +Y R+ + M + A+T++ + S
Sbjct: 109 FDAIESPNVYSWTLLIAAYARNGHHREAMEALRRMDLDGVEADAFTYSTIFNMISRKEML 168
Query: 93 ERGKQVHALM---IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ + +H + ++ G + + + TA+++MY K G + ++ E F +E +DVV WNA+L
Sbjct: 169 PQARWLHERVSTSLELGLNRDIFLGTAIVNMYGKCGSIHDAEEMFFRMEHRDVVAWNAML 228
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S++ +G EA +FQ M E V+
Sbjct: 229 SAYAHNGYELEAAKLFQEMEHEGVK 253
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 3/91 (3%)
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
G L ER VHA +++ G + + L++MY + G + S AF IE +V
Sbjct: 62 GRAGDLAEAER---VHAAVLRSGLGGDRFLSNLLVEMYGRCGGVEGSRTAFDAIESPNVY 118
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+W L++++ R+G +EA + M + VE
Sbjct: 119 SWTLLIAAYARNGHHREAMEALRRMDLDGVE 149
>gi|296087368|emb|CBI33742.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 80/188 (42%), Gaps = 31/188 (16%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH---ST 70
T I AL V Q+FD + L SL + L Y + A LF M
Sbjct: 97 TAIIHGHALRGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 156
Query: 71 CLNLTAYTFT----------------------------PVLGACSALPAPERGKQVHALM 102
C N+ +T VL AC L A E G+ VH+ +
Sbjct: 157 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 216
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
G V TAL+DMYSK G L ++ F +I+ KDVV WN+++ + HG ++EA
Sbjct: 217 ENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 276
Query: 163 GVFQAMTR 170
+F++M R
Sbjct: 277 QLFKSMCR 284
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TA++ Y+K+G L + F +E +D V WN ++ + ++G+ EA +F+ M + + +
Sbjct: 128 TAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAK 187
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 31/72 (43%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
Q+HA++ + G D P++ L Y+ G L SV F + V W A++ G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 157 LAKEAFGVFQAM 168
A +F M
Sbjct: 108 DVVSAQQLFDTM 119
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++FD++ D+ N+ + Y + AL+ MH L YTF V+ +C+
Sbjct: 80 YARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCA 139
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG-LLGESVEAFKEIEFKDVVTWN 146
L A GK+VH ++K G DS+ V+++L+ MYS+ G LG + F E+ +++V+W
Sbjct: 140 VLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMEL-VFGEMVVRNIVSWT 198
Query: 147 ALLSSFLRHGLAKEAFGVFQAMT 169
A+++ ++++ KE GVF+ M
Sbjct: 199 AVIAGYVQNRYFKEGLGVFREMV 221
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + +L S N+ + +Y ++ LF M + ++ T V+ AC++L A
Sbjct: 286 LFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGA 345
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+ +H L+ + G + + AL+DMY+K G + + E F+ + + VV+W +++ +
Sbjct: 346 LNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGA 405
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG ++A +F M E V+
Sbjct: 406 CASHGHGEDALKLFSRMKDEGVK 428
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF E+ ++ S + + Y ++R F +F M + A T VL AC+ L
Sbjct: 185 VFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEF 244
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +H IK G D + + AL+ +Y K G + + F + +++V+WNA++++
Sbjct: 245 LNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAA 304
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
+ ++ A +F+ M E+V+F
Sbjct: 305 YEQNNAGANAVKLFRRMQAEKVDF 328
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
+ C IA+A +VFD I D+ + N+ + Y ++ +LF M +
Sbjct: 300 EKCGEIAEA--------RRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGM 351
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
T VL ACSA+ A E G ++ + G S V TAL+DMY+K G L +++E
Sbjct: 352 RPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIE 411
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+++ K+V +WNAL+ +G EA FQ M E
Sbjct: 412 VFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNE 450
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF +M + + +YT +L A + PAP + HAL+ K G + +L+ MYS
Sbjct: 139 LFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYS 198
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G + + F I +DVV+WNA++ ++ R G+ E +F+ M +E
Sbjct: 199 YLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKE 247
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +V +AL+ MY K G + E+ F I KD+V WNA+++ + ++G++ EA +F +M
Sbjct: 288 DSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSM 346
>gi|302818301|ref|XP_002990824.1| hypothetical protein SELMODRAFT_132317 [Selaginella moellendorffii]
gi|300141385|gb|EFJ08097.1| hypothetical protein SELMODRAFT_132317 [Selaginella moellendorffii]
Length = 284
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+ ++ Q FD I + + S NS + +Y ++ + +F M + TF L
Sbjct: 6 RSVIHARQAFDRIENKSVISWNSIITAYAQNGHSKEALGIFFAMDPEGVKPNRVTFLAAL 65
Query: 84 GACS--ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY----GLLGESVEAFKEI 137
ACS + G+++H +I+ G +SE + +L++MY+ + G L E+ +AF
Sbjct: 66 DACSIETEQSSNLGREIHFRIIESGLESEETIANSLVNMYANFYGRCGNLKEAKQAFSMA 125
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+DV++W A++S+F HG +EA +F AM + V
Sbjct: 126 ARRDVISWTAMVSAFAHHGWGEEALEIFHAMILDGV 161
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 37/55 (67%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
MY + + + +AF IE K V++WN++++++ ++G +KEA G+F AM E V+
Sbjct: 1 MYGRCRSVIHARQAFDRIENKSVISWNSIITAYAQNGHSKEALGIFFAMDPEGVK 55
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + H L S N + Y+++ LF M S + V GACS L A
Sbjct: 367 LFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSA 426
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK++H +K + V ++++DMY+K G +G S F + KDV +WN +++
Sbjct: 427 LRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAG 486
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG KEA +F+ M R
Sbjct: 487 YGIHGRGKEALELFEKMLR 505
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + +SS N+ L Y ++ + L+ M + L+ +T +L ACS +
Sbjct: 265 RVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMK 324
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+++H ++ G +P + +L+ +Y G + F +E + +V+WN +++
Sbjct: 325 SLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIA 384
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++GL EA +F+ M + ++
Sbjct: 385 GYSQNGLPDEAINLFRQMLSDGIQ 408
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACS 87
+ VFD++ +L N+ + +YTR+ F ++F + S T +T V+ AC+
Sbjct: 160 SRMVFDKLRRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACA 219
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE-AFKEIEFKDVVTWN 146
L G+ +H + K S+ V AL+ MY K GL+ E+V+ F ++ K V +WN
Sbjct: 220 GLLDLGLGQIIHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWN 279
Query: 147 ALLSSFLRHGLAKEAFGVFQAMT 169
ALL + ++ ++A ++ MT
Sbjct: 280 ALLCGYAQNSDPRKALDLYLQMT 302
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
+L AC E G+++H M+ T ++ V+ T ++ MYS G +S F ++
Sbjct: 111 LLQACGQRKDIEVGRRLHE-MVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K++ WNA++S++ R+ L ++A +F +
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSEL 198
Score = 42.0 bits (97), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++FD + D++S N + Y LF M L +TFT +L ACS
Sbjct: 465 SQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSH 524
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E G + M+ + EP ++ T ++DM + G + +++ +E+ D W
Sbjct: 525 AGLVEDGLEYFNQMLN-LHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIW 583
Query: 146 NALLSSFLRHG 156
++LLSS HG
Sbjct: 584 SSLLSSCRIHG 594
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 19 ADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
A+AL YV +V F+++ D+ S N+ + + + L M S+ L
Sbjct: 147 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 206
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
+ + +L AC+ A + G+Q+H MIK DS+ + L+DMY+K L ++++
Sbjct: 207 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 266
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + +D++ WNAL+S G EAF +F + +E
Sbjct: 267 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE 305
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++DA+ +VF+E S GD+ ++ S + + ++ + LF M L
Sbjct: 359 CSCLSDAI--------RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 410
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + +L AC++L A E+GKQVHA +IK S+ AL+ Y+K G + ++ AF
Sbjct: 411 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 470
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + VV+W+A++ +HG K A +F M E +
Sbjct: 471 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 510
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 31 QVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFDE S + S N + +Y ++ +F M + + T + F+ V+ AC+
Sbjct: 63 RVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS 122
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+QVHA++++ G + + AL+DMY K G + + F+++ DVV+WNAL+
Sbjct: 123 RNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALI 182
Query: 150 SSFLRHG 156
S + +G
Sbjct: 183 SGCVLNG 189
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD +SH DL N+ + + +++F + L + T VL + ++L
Sbjct: 266 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 325
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +QVHAL K G + V L+D Y K L +++ F+E D++ ++++
Sbjct: 326 AASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 385
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + + A +F M R+ +E
Sbjct: 386 ALSQCDHGEGAIKLFMEMLRKGLE 409
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EF 139
PV+ C +P + G QVHA+ + G S+ V AL+ MY +G + ++ F E
Sbjct: 14 PVVLKC--VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSE 71
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ V+WN L+S+++++ +A VF M ++
Sbjct: 72 RNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 106
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
+ C IA+A +VFD I D+ + N+ + Y ++ +LF M +
Sbjct: 300 EKCGEIAEA--------RRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGM 351
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
T VL ACSA+ A E G ++ + G S V TAL+DMY+K G L +++E
Sbjct: 352 RPDKITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIE 411
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+++ K+V +WNAL+ +G EA FQ M E
Sbjct: 412 VFRKMPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNE 450
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF +M + + +YT +L A + PAP + HAL+ K G + +L+ MYS
Sbjct: 139 LFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAHALLGKIGLNGHDHTVHSLITMYS 198
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G + + F I +DVV+WNA++ ++ R G+ E +F+ M +E
Sbjct: 199 YLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKE 247
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VFD I D+ S N+ + +Y R +F M + T VL AC
Sbjct: 208 KVFDGIPTRDVVSWNAMMKAYGRVGMNGEVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQ 267
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ V + + +V +AL+ MY K G + E+ F I KD+V WNA++
Sbjct: 268 GDLVLGRWVEEWSWSARMEMDSLVGSALLGMYEKCGEIAEARRVFDTIIDKDIVAWNAMI 327
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + ++G++ EA +F +M
Sbjct: 328 TGYAQNGMSNEAISLFHSM 346
>gi|357138593|ref|XP_003570875.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Brachypodium distachyon]
Length = 664
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
AL M L T + V+ C++L A GK VH +K G + + +V ++L+ MY
Sbjct: 370 ALLSEMIRGGLRPDEATLSVVISICASLVALGYGKMVHLYAVKTGFEHDALVMSSLISMY 429
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
SK GL+ E+ + FK + +D VTWNA+++++ HG+A EA +F MT++
Sbjct: 430 SKCGLIAEASQVFKLLVQRDTVTWNAMIATYAYHGMASEALKLFNKMTKD 479
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 111 PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
PV AL+ Y++ G + E+ E F + ++VV+WNA++S +LR+G+ + A +F M
Sbjct: 105 PVSWAALLTGYARCGRVAEARELFDRMPDRNVVSWNAMMSGYLRNGMVERARELFDMM 162
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
N+T T P C+AL AP RGK++H ++ +S+ V +AL+DMY+K G L S
Sbjct: 504 NITLMTLLP---GCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRA 560
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F + ++V+TWN L+ ++ HGL EA +F M
Sbjct: 561 VFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMA 597
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 3/148 (2%)
Query: 24 KRYVYTHQVFDEISH--GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFT 80
++ +VFD + L N+ + Y ++ LF M + + T +
Sbjct: 332 EKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEALELFSRMEAEAGCAPSETTMS 391
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL AC+ + +H ++K G V+ ALMDMY++ G + + F I+ +
Sbjct: 392 GVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPR 451
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
DVV+WN L++ + G A EAF + M
Sbjct: 452 DVVSWNTLITGCVVQGHAAEAFQLVTEM 479
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 12/109 (11%)
Query: 73 NLTAYTFTPVLGACSALPAPER---GKQVHALMIKGGTDSEPVVK---TALMDMYSKYGL 126
+++++T VL ACS LP + G++ HA +K G E + AL+ MY++ GL
Sbjct: 166 DVSSFTLVSVLLACSHLPGDDGRRLGREAHAFALKRGFLDEGRERFPFNALLSMYARLGL 225
Query: 127 LGESVEAFKEIEFK------DVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ ++ F+ DVVTWN ++S ++ G EA V M
Sbjct: 226 VDDAQSLFRTTAAAFSPGGGDVVTWNTMISLLVQGGRCAEAVEVLYDMV 274
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 39 GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQV 98
GD+ + N+ + + + M S + TF L ACS L G+++
Sbjct: 245 GDVVTWNTMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREM 304
Query: 99 HALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSFLRH 155
HA+++K + V +AL+DMY+ + + F + + + WNA++ + +
Sbjct: 305 HAVVLKDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQA 364
Query: 156 GLAKEAFGVFQAMTRE 171
G+ +EA +F M E
Sbjct: 365 GMDEEALELFSRMEAE 380
>gi|302788029|ref|XP_002975784.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
gi|300156785|gb|EFJ23413.1| hypothetical protein SELMODRAFT_150748 [Selaginella moellendorffii]
Length = 590
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSA 88
+VF+ + D+ S ++ + +Y +S ++ M S T + A TF V+GAC+
Sbjct: 96 RKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLMESETSVEPNAVTFVGVIGACTG 155
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
RG+QVH ++ G +++ V +AL+ +Y K G L ++ +AF +E +DV+ WN +
Sbjct: 156 CGDVIRGRQVHGRLVSLGLETDVAVGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFM 215
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
LS++ G ++ + AM E
Sbjct: 216 LSAYSERGSPQQVIEAYDAMDVE 238
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
+Y ++ + LF M S + A T VLGACS GK+VHA +
Sbjct: 15 AYAQNGRRNEAFLLFERMESEGIRPNAVTCLHVLGACSCQNELPFGKKVHAYISASEFKW 74
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ ++T+L++MY+K G L + + F +E KDV++W+ ++S++ + G EA +++ M
Sbjct: 75 DISLQTSLVNMYAKCGNLEGARKVFNRLERKDVISWSTMISAYNQSGRHSEAIEIYRLME 134
Query: 170 RE 171
E
Sbjct: 135 SE 136
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 64/121 (52%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
+ SY ++ AL+ M S + + T+T VL ACS+L G+++H+ +
Sbjct: 349 IASYAQAGRGEEALALYKTMLSEEIKPNSVTYTSVLSACSSLGNILEGRKIHSSLEGKAE 408
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+ + V+ +L+ +Y++ G L ++ F +I +DV +W ++++F HG + A + +
Sbjct: 409 ELDVAVQNSLLSLYARCGSLRDAWSCFAKIHNRDVFSWTGMVAAFAHHGHSARALELVRE 468
Query: 168 M 168
M
Sbjct: 469 M 469
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 44/210 (20%)
Query: 6 RMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPA 59
R+ + +T +++ AL + YV + FD + D+ N L +Y+ +
Sbjct: 168 RLVSLGLETDVAVGSALVQLYVKCGNLEDAKKAFDRVEKRDVLCWNFMLSAYSERGSPQQ 227
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG------------- 106
+ M + A T+T VL ACSA+ +G++VH+ ++ G
Sbjct: 228 VIEAYDAMD---VEPNAVTYTNVLIACSAMEDLAQGQKVHSRIVSSGLETDMTMETSLLS 284
Query: 107 --------------------TDSEPVVKTALMDMYSKYGLLGESVEAF--KEIEFKDVVT 144
D++ V TAL++MY+ G L + F + E +DVV
Sbjct: 285 LYIKCRSLKSACQVFEAMGKKDTDVVTDTALLNMYAACGNLEAAKRVFGSRRDERRDVVF 344
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
W A+++S+ + G +EA +++ M E ++
Sbjct: 345 WTAMIASYAQAGRGEEALALYKTMLSEEIK 374
>gi|255572205|ref|XP_002527042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533604|gb|EEF35342.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 520
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N + Y ++ ++ M + A TF+ +L ACS L A E+GK++H + K
Sbjct: 302 NVMISGYVTIGDYVKALDMYDEMKIASVKPDAVTFSSILSACSQLAALEKGKEIHNCITK 361
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
++ +V AL+DMY+K G + E++ F ++ +D+++W +++S++ HG A EA +
Sbjct: 362 NDLETNEIVMGALLDMYAKCGAVDEALSVFNKLPERDLLSWTSIISAYGSHGQALEALRL 421
Query: 165 FQAMTRER 172
F+ + + +
Sbjct: 422 FEELQQSK 429
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y Q+FDE+ D++ N+ + Y + +F M + + T T V+ +C+
Sbjct: 83 YAIQLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKMRDSGFEPNSVTLTTVISSCA 142
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L ERGK++H +++ G + V +AL+DMY K+G L + + F+++ K +V WN+
Sbjct: 143 RLLDLERGKEIHREVMQNGMVLDGFVGSALVDMYGKFGCLDLAKDIFEQMPKKTLVAWNS 202
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
L++ + +KE +F M E
Sbjct: 203 LIAGYSSAADSKECIELFWRMNME 226
Score = 62.8 bits (151), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
L ++T+ VL AC L + G+ +H +IK G + VV ++L+ +++K L G ++
Sbjct: 26 LQPDSFTYPSVLKACGGLGRYDYGRMIHTHLIKSGFVFDIVVASSLVSLHAKCNLFGYAI 85
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F E+ +DV WN ++S + + G A++A +F M
Sbjct: 86 QLFDEMPERDVACWNTVISCYYQDGKAEKALEMFGKM 122
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/138 (21%), Positives = 63/138 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ L + NS + Y+ + + LF M+ T T + +L ACS
Sbjct: 187 DIFEQMPKKTLVAWNSLIAGYSSAADSKECIELFWRMNMEGTKPTVTTLSSILLACSRAA 246
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+ +H ++ + V + L+++Y K G + + F + +VV WN ++S
Sbjct: 247 HLQHGRFIHGYAVRNRVQLDIFVSSGLIELYFKCGKVQSAENIFYMLPKANVVLWNVMIS 306
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ G +A ++ M
Sbjct: 307 GYVTIGDYVKALDMYDEM 324
>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g46460, mitochondrial; Flags: Precursor
gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR + +VFDE H ++ + L Y+ ++ ++F M + TF L
Sbjct: 274 KRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGL 333
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+CSAL + GK++H + +K G +++ V +L+ MYS G + ++V F +I K +V
Sbjct: 334 NSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIV 393
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTR 170
+WN+++ +HG K AF +F M R
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M C+ T+ FT V+ AC+ PA G QVH L+IK G E V +L+ Y+
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYA 271
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+G+S + F E + V W ALLS + + ++A +F M R +
Sbjct: 272 NCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R V +FDE+ D+ S NS + + LF M + ++T ++
Sbjct: 81 RLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSWTAMVN 136
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTA----LMDMYSKYGLLGESVEAFKEIEFK 140
C ++ +++ M PV TA ++ Y ++G + ++++ FK++ K
Sbjct: 137 GCFRSGKVDQAERLFYQM--------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+V++W ++ ++ + EA +F+ M R
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLR 218
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 10/172 (5%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
SF F + + L +R +VF+++ +S + YTRS
Sbjct: 28 SFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALN 87
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK-TALMDMY 121
LF M ++ ++ C E G A+ + VV TA+++
Sbjct: 88 LFDEMPVR----DVVSWNSMISGC-----VECGDMNTAVKLFDEMPERSVVSWTAMVNGC 138
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ G + ++ F ++ KD WN+++ +L+ G +A +F+ M + V
Sbjct: 139 FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190
>gi|347954484|gb|AEP33742.1| chlororespiratory reduction 21 [Barbarea verna]
Length = 607
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI ++ + N+ + Y ++ LF M
Sbjct: 201 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLFFDMR 260
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GKQ HA+ I G + + ++ T++++ Y K GL+
Sbjct: 261 EEGIEPTRVTVSTCLSASANMGGIEEGKQSHAIAIVHGLELDNILGTSILNFYCKVGLIE 320
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL ++A + Q M E +++
Sbjct: 321 YAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKY 367
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ V AC AL G+ VH ++K G D V ++L DMY K G+L ++ + F E
Sbjct: 168 FVVPNVXKACGALQWSRFGRGVHGYVVKSGXDDCVFVASSLADMYGKCGVLDDARKVFDE 227
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I ++VV WNAL+ ++++G+ +EA +F M E +E
Sbjct: 228 IPERNVVAWNALMVGYVQNGMNEEAIRLFFDMREEGIE 265
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ + N + Y + + M L T ++ A +
Sbjct: 321 YAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLATLMSAAA 380
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ V+ + +DMY+K G + ++ +AF I KD++ WN
Sbjct: 381 RTQNLKLGKEVQCYCIRHSLESDIVLASTAIDMYAKCGSIVDARKAFDSIVEKDLILWNT 440
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 441 LLAAYAEPGLSGEALRLFYEMQLESV 466
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L A + T L AC+ L + G+ +H +I+ S V ++T+L+DMY+K G
Sbjct: 531 MQESGLRPNAISITVALSACAHLASLHLGRSIHGYIIRNQHHSSSVSIETSLVDMYAKCG 590
Query: 126 LLGES 130
L ++
Sbjct: 591 DLNKA 595
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V+D+++ D ++ N + +Y R+ F + +F + + YT++ +L C +
Sbjct: 169 RVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTIS 228
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+HA ++K SE V AL+ +YSK G++ E+ F+ + +++++W A ++
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASIN 288
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F +HG K+A F M +E
Sbjct: 289 GFYQHGDFKKALKQFSMMRESGIE 312
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 67/129 (51%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ + Y + FC M + +T++ + ACS+ P+ Q+H+ +
Sbjct: 384 SWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRL 443
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
IK +S V ++L++ Y++ G L +V+ F +I DVV+WN+++ ++ ++G +A
Sbjct: 444 IKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAI 503
Query: 163 GVFQAMTRE 171
+ + M E
Sbjct: 504 FLLRKMIEE 512
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 14/180 (7%)
Query: 1 MLSFIRMTNFPAK------TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRS 54
++ R+T F AK C +++A ++FD+I + ++ + R
Sbjct: 831 IIGLARLTYFAAKLMSFYTECGQLSNA--------RKLFDKIPNTNIRRWIVLTGACARR 882
Query: 55 RNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK 114
+ + F M L + +L AC L G+ +H +++K +S+ +
Sbjct: 883 GFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 942
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+AL+ MYSK G + ++ F I KD+V NA++S + +HG EA + Q M + V+
Sbjct: 943 SALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVK 1002
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ + ++ S + + + + +F F M + + +TF+ VL +C +
Sbjct: 271 VFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKD 330
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALLS 150
G+ H +IK G S V TA++DMYS G + E+ + FK++ V+WNAL++
Sbjct: 331 FIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIA 390
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ + ++A F M +E V
Sbjct: 391 GYVLNEKIEKAMEAFCRMVKEDV 413
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++ T + +L AC+ + GK++H + G + + V++AL+DMY+K G + E+ F
Sbjct: 1074 SSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILF 1133
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ VTWN+L+ + HG EA +F M
Sbjct: 1134 YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM 1167
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y F+ L C E G++ H ++K G S+ V T+L+DMY+K G + +V + +
Sbjct: 115 YVFS-ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDK 173
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ D T N L+S++ R+G +AF VF
Sbjct: 174 MTSLDAATCNCLISAYARNGFFVQAFQVF 202
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS +F Y LF M + L TFT VL ACS E G+ + M +
Sbjct: 1145 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKM-Q 1203
Query: 105 GGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRHG 156
EP ++ ++D+ + G L E+ + K + + D W ALL + HG
Sbjct: 1204 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
RG+ +HA ++ G LM Y++ G L + + F +I ++ W L +
Sbjct: 821 RGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACA 880
Query: 154 RHGLAKEAFGVFQAMTRE 171
R G +EA F M +E
Sbjct: 881 RRGFYEEALSAFSEMQKE 898
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ +S D+ + NS + Y + + +F + + +N A T V+ AC+ L
Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLSS 151
++G +H L++K G +S+ VK AL+DMY+K G L + F + +F KD VTWN ++++
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++++G AKEA F M E
Sbjct: 608 YMQNGHAKEAISSFHQMRLE 627
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + NS + +YTRS+ + ++ M L YTFT VL AC+
Sbjct: 85 VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALN 144
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G H + + G + + + L+DMYSK G L + E F ++ +DVV WNA+++
Sbjct: 145 LQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAG 204
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ EA F++M VE
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVE 227
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TF VL A + L A G HA +I+ G S +V +L+DMY+K G L S + F
Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLF 691
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
E++ KD V+WNA+LS + HG A +F M +V+
Sbjct: 692 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQI 732
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D S + + Y + F LF M + + + A +
Sbjct: 284 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+GK++H ++ DS+ +V T LM MY+K G ++ + F ++ +D+V W+A+++
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ G +EA +FQ M ++++
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMK 427
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
+LF M + + T +L AC+ L + GK +H +K DS+ TAL+ MY
Sbjct: 416 SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMY 475
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+K G ++ F + +D+VTWN+L++ + + G A +F
Sbjct: 476 AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF 519
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y+ ++F+E+ H D S N+ L Y + ALF M + + + + +F VL AC
Sbjct: 686 YSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACR 745
Query: 88 ALPAPERGKQV-HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E G+++ H++ K + ++D+ + GL E++ K + + D W
Sbjct: 746 HXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVW 805
Query: 146 NALLSSFLRHGLAK 159
ALL S H K
Sbjct: 806 GALLGSCRMHSNVK 819
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ + N+ + ++S + F M + ++ + + L
Sbjct: 185 EVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS 244
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E + +H + + D V L+D+YSK G + + F ++ +D V+W +++
Sbjct: 245 NIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +G E +F M
Sbjct: 303 GYAHNGCFVEVLELFDKM 320
>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
Length = 744
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + + + N+ + + +R + +AL M L T V+ AC+ +
Sbjct: 115 EVFERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQ 174
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ RG+ VH ++ G +S+ V AL+++Y K G L + A + IE +D ++W LL+
Sbjct: 175 SISRGRIVHEIVAGEGLESDNAVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLA 234
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ RHG K A V + M E V+
Sbjct: 235 AYARHGHGKRAIAVIKRMDHEGVKL 259
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ I D S + L +Y R + A+ M + L ++TF +L +C A+
Sbjct: 216 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 275
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALL 149
A G+++H + + G + +PV++TAL+DMY K G + AF + + +DV WNALL
Sbjct: 276 ALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALL 335
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++++ KE G+F M+ + V
Sbjct: 336 AAYVLRDQGKETLGIFARMSLQGV 359
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGA 85
++ + FD + ++ S ++ + +Y + R PA LF M + A TF VL A
Sbjct: 9 IHARRAFDAMVVRNVVSWSAMIAAYAQ-RGHPADALELFVRMDHEGVKANAITFVSVLDA 67
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVV-KTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
C++L A GK +H ++ G + V+ +++MY K G + + E F+ +E K+ VT
Sbjct: 68 CASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNTVT 127
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN ++++ RH KEAF + M
Sbjct: 128 WNTMIAACSRHDRYKEAFALLGEM 151
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 9/144 (6%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D++ N+ L +Y T +F M + A TF +L AC++L A G+ H
Sbjct: 327 DVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTH 386
Query: 100 ALMIKGG------TDSEPVVKTALMDMYSKYGLLGESVEAF---KEIEFKDVVTWNALLS 150
+ M++ G S ++ T++++MY+K G L ++ F + DVV W+A+++
Sbjct: 387 SRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVA 446
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ + GL++EA F +M +E V+
Sbjct: 447 AYSQFGLSEEALRCFYSMQQEGVK 470
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 79/140 (56%), Gaps = 1/140 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ +S D+ + NS + Y + + +F + + +N A T V+ AC+ L
Sbjct: 488 FNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDL 547
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLSS 151
++G +H L++K G +S+ VK AL+DMY+K G L + F + +F KD VTWN ++++
Sbjct: 548 DQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAA 607
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++++G AKEA F M E
Sbjct: 608 YMQNGHAKEAISSFHQMRLE 627
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ TF VL A + L A G HA +I+ G S +V +L+DMY+K G L S + F
Sbjct: 632 NSVTFVSVLPAAAYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLF 691
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
E++ KD V+WNA+LS + HG A +F M +V+
Sbjct: 692 NEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQI 732
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + NS + +YTRS+ + ++ M L YTFT VL AC+
Sbjct: 85 VFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALN 144
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G H + + G + + + L+DMYSK G L + E F ++ +DVV WNA+++
Sbjct: 145 LQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAG 204
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ EA F++M VE
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVE 227
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D S + + Y + F LF M + + + A +
Sbjct: 284 RVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETI 343
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+GK++H ++ DS+ +V T LM MY+K G ++ + F ++ +D+V W+A+++
Sbjct: 344 DLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIA 403
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ G +EA +FQ M ++++
Sbjct: 404 ALVQTGYPEEALSLFQEMQNQKMK 427
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
+LF M + + T +L AC+ L + GK +H +K DS+ TAL+ MY
Sbjct: 416 SLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMY 475
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+K G ++ F + +D+VTWN+L++ + + G A +F
Sbjct: 476 AKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF 519
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y+ ++F+E+ H D S N+ L Y + ALF M + + + + +F VL AC
Sbjct: 686 YSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACR 745
Query: 88 ALPAPERGKQV-HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E G+++ H++ K + ++D+ + GL E++ K + + D W
Sbjct: 746 HAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVW 805
Query: 146 NALLSSFLRHGLAK 159
ALL S H K
Sbjct: 806 GALLGSCRMHSNVK 819
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/138 (19%), Positives = 60/138 (43%), Gaps = 2/138 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ + N+ + ++S + F M + ++ + + L
Sbjct: 185 EVFDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLS 244
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E + +H + + D V L+D+YSK G + + F ++ +D V+W +++
Sbjct: 245 NIELCRSIHGYVFR--RDFSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMA 302
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +G E +F M
Sbjct: 303 GYAHNGCFVEVLELFDKM 320
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 76/142 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V+D + D S +S + Y++ + LF M + ++ +Y + +L A
Sbjct: 428 RKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLS 487
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G QVHA + K G +EP V ++L+ MYSK+G + + +AF +I D++ W AL+
Sbjct: 488 EESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALI 547
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+S+ +HG A EA V+ M +
Sbjct: 548 ASYAQHGKANEALQVYCLMKEK 569
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 84/161 (52%), Gaps = 3/161 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ DA K R+ ++VF + ++ N+ + R++N+ A + LF M +
Sbjct: 12 SLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQKP 71
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+YT++ VL AC++L GK V A +IK G + + V T+++D+Y+K G + E+ E F
Sbjct: 72 DSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMAEAREVF 130
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
I VV+W +LS + + A A +F+ M VE
Sbjct: 131 SRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEI 171
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
D+I ++ +N + S+++++ LF M LN ++ +L S L
Sbjct: 234 LDDIRRQNI--VNVMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL---SVLDCL 288
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GKQVH+ +K G + V ++L MYSK G L ES F+EI FKD W +++S F
Sbjct: 289 NLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGF 348
Query: 153 LRHGLAKEAFGVFQAMTRE 171
+G +EA G+F M E
Sbjct: 349 NEYGYLREAIGLFSEMLDE 367
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 68/141 (48%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ +F EI D + S + + LF M + T VL CS+
Sbjct: 326 SYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSS 385
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
LP+ R K++H ++ G D + +AL++ YSK G L + + + + D V+ ++L
Sbjct: 386 LPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSL 445
Query: 149 LSSFLRHGLAKEAFGVFQAMT 169
+S + +HGL ++ F +F+ M
Sbjct: 446 ISGYSQHGLVQDGFLLFRDMV 466
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 14 TCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
C SI D K +VF IS+ + S L YT+S + + +F M +
Sbjct: 109 VCTSIVDLYAKCGHMAEAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSG 168
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + + T T V+ AC QVHA + K G + V AL+ M SK G + S
Sbjct: 169 VEINSCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSE 228
Query: 132 EAFK---EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F+ +I +++V N +++SF ++ +A +F M +E
Sbjct: 229 RVFEDLDDIRRQNIV--NVMVTSFSQNKKPGKAIRLFTRMLQE 269
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 6/178 (3%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRN 56
+F+ F ++A AL YV +VF I + S + + Y + N
Sbjct: 198 AFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGN 257
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
+ LF + + + + + + ++G + ++GKQ+HA IK + + V +
Sbjct: 258 LAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNS 317
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++DMY K G++ E+ F E+ ++V++W +++ + +HGL KEA +F M + E
Sbjct: 318 ILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTE 375
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 75/138 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD + ++ S + + + ++ N + LF M + + +TF+ L AC L
Sbjct: 28 DVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLN 87
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H + +K G D VV +++DMYSK G + E+ F+ + +++++WNA+++
Sbjct: 88 GLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIA 147
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G ++A +FQ M
Sbjct: 148 GYTVAGFCEKALVLFQKM 165
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
+L S N+ + YT + LF M L +TFT L ACS L A + G Q+H
Sbjct: 138 NLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIH 197
Query: 100 ALMIKGG--TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
A +I GG V AL+D+Y K G L + F IE K V++W AL+ + + G
Sbjct: 198 AFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGN 257
Query: 158 AKEAFGVFQAMTRERVE 174
E+ +F+ + ++
Sbjct: 258 LAESMELFRQLRESSIQ 274
>gi|222625627|gb|EEE59759.1| hypothetical protein OsJ_12247 [Oryza sativa Japonica Group]
Length = 950
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+ V ++F ++ +++S NS + Y ++R F F M ++ + TF+ VL
Sbjct: 459 KMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++L + E GK VHA +IK G V TAL DMY+K G L S F E+ ++ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
W A++ +G A+E+ +F+ M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDM 602
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V DE+ + S + + + + N +L+ M + F+ VLGAC++L
Sbjct: 332 RRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASL 391
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+++H +K + V +AL+DMY K L ++ F + K++V WN+L+
Sbjct: 392 QDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLI 451
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S + + EA +F+ M V
Sbjct: 452 SGYSNNSKMVEAEELFKKMPARNV 475
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDM 120
+F M S ++ T V+ AC + + L +K D V+ +L+ +
Sbjct: 231 GVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITL 290
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y + G + F E+E +DVV+W ALL + G + A V M ER E
Sbjct: 291 YLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP-ERNE 343
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 77/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+EI D N+ + SY LF L T +T + VL A S L
Sbjct: 324 RVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILL 383
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G Q+H+L++K G +S+ +V ++L++MY+K+GL+ +++ F +I +D+++WN ++
Sbjct: 384 PVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIM 443
Query: 151 SFLRHGLAKEAFGVFQAM 168
+G +A +F+ +
Sbjct: 444 GLAYNGRVSKALEIFKEL 461
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF + D++S NS ++S +S F M S + +T + V+ CS
Sbjct: 220 YAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCS 279
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E+G+Q+ AL I+ G S +V +A +D++SK L +SV F+EI D V NA
Sbjct: 280 NLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNA 339
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++SS+ HG + A +F RE +
Sbjct: 340 MISSYAWHGFGENALQLFVLTLRENL 365
Score = 68.9 bits (167), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFDE+ D+ S N+ + Y F + F M + + +T++ +L S +
Sbjct: 123 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLL---SFV 179
Query: 90 PAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ RGKQ+HA MI+ G D S VV +L+ MY K+G++ + F +E D+ +WN+L
Sbjct: 180 SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSL 239
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ S + G A F M
Sbjct: 240 IWSCGKSGYQNLALRQFVLM 259
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
++ ++ C L + + K VHA +IK G ++ + +D+YS+ G +S+ F++I
Sbjct: 40 YSNLIEHCFLLKSLDYAKFVHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDII 99
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K++++WN L +F+R G + A VF M + V
Sbjct: 100 DKNLISWNIFLKAFVRFGELERARDVFDEMPKRDV 134
>gi|356499342|ref|XP_003518500.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g29230-like [Glycine max]
Length = 446
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA---YTFTPVLGACS 87
+VF+E+ ++ S N + Y R+ F AL C+ + YT VL ACS
Sbjct: 108 KVFEEMPARNVYSWNGLIGGYVRNGLFKE--ALECFKRMLVDGVVVPNDYTVVAVLSACS 165
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E GK VH G V AL+DMY+K G++ ++++ F ++ KD++TWN
Sbjct: 166 RLGDLEIGKWVHVYADSIGYKGNLFVGNALIDMYAKCGVIEKALDVFDGLDVKDIITWNT 225
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
+++S H A +A +F+ M R
Sbjct: 226 IINSLAMHXHAADALSLFEGMKR 248
Score = 39.7 bits (91), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + + ++ Y+ G + V+ F+E+ ++V +WN L+ ++R+GL KEA F+
Sbjct: 84 DCDVMSWNTVLSGYANNGEVELFVKVFEEMPARNVYSWNGLIGGYVRNGLFKEALECFKR 143
Query: 168 MTRERV 173
M + V
Sbjct: 144 MLVDGV 149
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 2/160 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K R + +VF + D S NS + Y ++ + LF M S +
Sbjct: 246 SLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRP 305
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A F+ V+ AC+ L GKQ+H +++GG + +AL+DMYSK G + + + F
Sbjct: 306 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIF 365
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ D V+W A++ HG EA +F+ M R+ V+
Sbjct: 366 DRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 405
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 78/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + D+ S N+ + Y +S + + M ++ L A+T + VL S
Sbjct: 161 KVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYV 220
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H +I+ G DS+ + ++L+DMY+K + +S F + +D ++WN+L++
Sbjct: 221 DVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVA 280
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++++G EA +F+ M +V
Sbjct: 281 GYVQNGRYNEALRLFRQMVSAKVR 304
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 8/170 (4%)
Query: 4 FIRMTNFPAKTCISIADALPKRYVYTHQ---VFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
FIR T + T SI ++ H+ VF + + + S + +T F
Sbjct: 31 FIR-TQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRA 89
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
A F M ++ F VL +C+ + G+ VH +++ G D + ALM+M
Sbjct: 90 LASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNM 149
Query: 121 YSKYGLLG-ESV-EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
YSK LLG +SV + F+ + KDVV++N +++ + + G+ ++A + + M
Sbjct: 150 YSK--LLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREM 197
>gi|242082435|ref|XP_002445986.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
gi|241942336|gb|EES15481.1| hypothetical protein SORBIDRAFT_07g029130 [Sorghum bicolor]
Length = 567
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD I D+ S N+ + Y + + L M + T VL ACSAL
Sbjct: 225 RLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFREGVKPDHATLIAVLTACSALA 284
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK HA+ IK +S ALM MYSK G +GES F + KD+V+WN +++
Sbjct: 285 LLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIA 344
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ +HG ++ +F M
Sbjct: 345 AYAQHGKYQKVIALFHEM 362
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS--RNFPATWALF------------------CYMHST 70
+VFD + H D+ S N+ L + R+ + PA LF C H
Sbjct: 36 RVFDAMPHRDVVSWNALLTALWRAGRHHLPAARRLFDEAMPSRDVVSWNSIIAGCLAHGD 95
Query: 71 CLNLTAY----------TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
+AY T+ +L L + ++ M K V T ++D
Sbjct: 96 LDAASAYFAGAPKRNVATWNAMLAGLLRLGRADDADRLFGEMPK----RNVVSYTTMVDG 151
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ G + + E F + +++V+W A++S ++ +G+ EA +F+AM + V
Sbjct: 152 LARRGEVARAREVFDAMPDRNLVSWAAMISGYVENGMFVEATKLFEAMPEKNV 204
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V TA++ Y K G + + F I KDV++WN +++ ++ +G +EA + M RE
Sbjct: 205 VACTAMITSYCKQGDVESARRLFDGIRAKDVISWNTMIAGYVHNGHGEEAMRLHAVMFRE 264
Query: 172 RVE 174
V+
Sbjct: 265 GVK 267
>gi|147820082|emb|CAN67135.1| hypothetical protein VITISV_005195 [Vitis vinifera]
Length = 800
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE S D S N+ + NF M + Y+F +L + +
Sbjct: 55 KMFDETSQRDAVSWNTMIAGXVNFGNFETALEFLKSMKRYGFAVDGYSFGSILKGVACVG 114
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVH++++K G + +AL+DMY+K + ++ E FK I ++ VTWNAL+S
Sbjct: 115 YVEVGQQVHSMIVKIGYEGNVFAGSALLDMYAKCERVEDAFEVFKSINIRNSVTWNALIS 174
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ G AF + M E VE
Sbjct: 175 GYAHVGDRGTAFWLLDCMELEGVEI 199
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 15 CISIADALPKRYVYTHQVFD-EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C SI DA +VFD I DL + NS L +Y + + LF M
Sbjct: 249 CGSIEDA--------ERVFDGAIETRDLVTWNSMLAAYLVNNQEEEAFELFLEMQVLGFE 300
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY--SKYGLLGESV 131
YT+T V+ A +GK +H L+IK G + + +L+ MY S + E++
Sbjct: 301 PDIYTYTSVISAAFEXAHQGQGKSLHGLVIKRGLEFLVPISNSLIAMYLKSHSKSMDEAL 360
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F+ +E KD V+WN++L+ F + GL+++A F+ M + V
Sbjct: 361 NIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENMRSQYV 402
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 30/168 (17%)
Query: 16 ISIADALPKRYVYTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
+ I+++L Y+ +H +F+ + + D S NS L +++S F M
Sbjct: 338 VPISNSLIAMYLKSHSKSMDEALNIFESLENKDHVSWNSILTGFSQSGLSEDALKFFENM 397
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
S + + Y F+ VL +CS L + G+QVH L G++
Sbjct: 398 RSQYVVIDHYAFSAVLRSCSDLATLQLGQQVHVLC----------------------GVI 435
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++ ++F + WN+L+ + +HG K A +F M RV+
Sbjct: 436 EDARKSFDATPKDSSIAWNSLIFGYAQHGRGKIALDLFFLMKDRRVKL 483
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR-SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF I+ + + N+ + Y A W L C M + + TF P+L
Sbjct: 156 EVFKSINIRNSVTWNALISGYAHVGDRGTAFWLLDC-MELEGVEIDDGTFAPLLTLLDDP 214
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK-EIEFKDVVTWNAL 148
+ QVHA ++K G S+ V A++ YS+ G + ++ F IE +D+VTWN++
Sbjct: 215 DLHKLTTQVHAKIVKHGLASDTTVCNAIITAYSECGSIEDAERVFDGAIETRDLVTWNSM 274
Query: 149 LSSFL 153
L+++L
Sbjct: 275 LAAYL 279
Score = 38.5 bits (88), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 39/84 (46%)
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S+ A R H L IK GT + ++ Y+K G + + + F E +D V+WN
Sbjct: 10 SSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFDETSQRDAVSWN 69
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
+++ + G + A ++M R
Sbjct: 70 TMIAGXVNFGNFETALEFLKSMKR 93
>gi|449485565|ref|XP_004157209.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 953
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ S +S + Y ++ F T ALF M + T V+ AC+ L A
Sbjct: 464 IFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEMQMSGFKPDETTLVSVISACARLAA 523
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA + + G ++ T L+DMY K G + ++E F + K + TWNAL+
Sbjct: 524 LEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALILG 583
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+GL + + +F M + V
Sbjct: 584 LAMNGLVESSLDMFSNMKKCHV 605
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 74/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D+ + ++ + + ++ + F MH + + L AC+ L
Sbjct: 331 KLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLL 390
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK +H+L +K GT+S ++ AL+ MYSK G + + + F E D+++WN+++S
Sbjct: 391 VVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYLLDLISWNSMIS 450
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+L+ L A +F +M + V
Sbjct: 451 GYLKCNLVDNAKAIFDSMPEKDV 473
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
+Y ++ + + L+ M S L YT+ ++ ACS + KQVH ++K G DS
Sbjct: 187 AYIQTNSPHFAFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDS 246
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ V+ L++ +S + ++ F E D V+WN++L+ ++ G +EA ++ M
Sbjct: 247 DVYVRNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP 306
Query: 170 RERV 173
+
Sbjct: 307 ERSI 310
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 4/129 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF + +S+ N+ + + ++ +F M + TF VLGAC +
Sbjct: 564 EVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGACRHMG 623
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ MI +P VK ++D+ + G L E+ E + DV TW A
Sbjct: 624 LVDEGQHHFYSMIHD-HKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVATWGA 682
Query: 148 LLSSFLRHG 156
LL + +HG
Sbjct: 683 LLGACKKHG 691
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/97 (22%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L + ++ +L + E K ++ M + + +++ ++ GL+ E+ +
Sbjct: 277 LDSVSWNSILAGYIEIGNVEEAKHIYHQM----PERSIIASNSMIVLFGMRGLVVEACKL 332
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F E+ KD+VTW+AL++ F ++ + +EA F M +
Sbjct: 333 FDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHK 369
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
Query: 19 ADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
A+AL YV +V F+++ D+ S N+ + + + L M S+ L
Sbjct: 240 ANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGL 299
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
+ + +L AC+ A + G+Q+H MIK DS+ + L+DMY+K L ++++
Sbjct: 300 VPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMK 359
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + +D++ WNAL+S G EAF +F + +E
Sbjct: 360 VFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKE 398
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++DA+ +VF+E S GD+ ++ S + + ++ + LF M L
Sbjct: 452 CSCLSDAI--------RVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEP 503
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + +L AC++L A E+GKQVHA +IK S+ AL+ Y+K G + ++ AF
Sbjct: 504 DPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAF 563
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + VV+W+A++ +HG K A +F M E +
Sbjct: 564 SSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGIN 603
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Query: 31 QVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFDE S + S N + +Y ++ +F M + + T + F+ V+ AC+
Sbjct: 156 RVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS 215
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+QVHA++++ G + + AL+DMY K G + + F+++ DVV+WNAL+
Sbjct: 216 RNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALI 275
Query: 150 SSFLRHG 156
S + +G
Sbjct: 276 SGCVLNG 282
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R +VFDEI S +S + +Y+ + + F M + + + PV+
Sbjct: 51 RRPCCARRVFDEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFAL-PVV 109
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDV 142
C +P + G QVHA+ + G S+ V AL+ MY +G + ++ F E ++
Sbjct: 110 LKC--VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNA 167
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V+WN L+S+++++ +A VF M ++
Sbjct: 168 VSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQ 199
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD +SH DL N+ + + +++F + L + T VL + ++L
Sbjct: 359 KVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLE 418
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +QVHAL K G + V L+D Y K L +++ F+E D++ ++++
Sbjct: 419 AASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMIT 478
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + + A +F M R+ +E
Sbjct: 479 ALSQCDHGEGAIKLFMEMLRKGLE 502
>gi|413925171|gb|AFW65103.1| hypothetical protein ZEAMMB73_773985 [Zea mays]
Length = 567
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD I D+ S N+ + Y + + L M + T VL ACSAL
Sbjct: 225 RLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFREGVKPDHATLIAVLTACSALA 284
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK HA+ IK +S ALM MYSK G +GES F + KD+V+WN +++
Sbjct: 285 LLRQGKSTHAIAIKAMLESGISFSNALMTMYSKCGNVGESELVFINLRTKDIVSWNTIIA 344
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ +HG ++ +F M
Sbjct: 345 AYAQHGKYQKVIALFHEM 362
Score = 41.6 bits (96), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS--RNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+VFD ++H D+ S N+ L + R+ + PA LF + ++ ++ C A
Sbjct: 36 RVFDAMTHRDVVSWNALLTALWRAGRHHLPAARRLF---DEAMPSRDVVSWNSIIAGCLA 92
Query: 89 -----------LPAPERGKQVHALMIKGGT------------DSEP----VVKTALMDMY 121
APER M+ G D P V T ++D
Sbjct: 93 HGDLDAASAYFAGAPERNVATWNAMLAGLVRLGRVVDAQRLFDEMPERNVVSYTTMVDWL 152
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ G + + E F + +++V+W A++S + +G+ EA +F+AM + V
Sbjct: 153 ARRGEVERAREVFDSMPDRNLVSWAAMISGCVENGMFVEARELFEAMPEKNV 204
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V TA++ + K G + + F I KDV++WNA+++ ++ +G +EA + M RE
Sbjct: 205 VACTAMITGHCKQGDVDSARRLFDGIRAKDVISWNAMIAGYVHNGHGEEAMRLHALMFRE 264
Query: 172 RVE 174
V+
Sbjct: 265 GVK 267
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+I + + N+ + S R+ ALF + + L T T L +C+ L
Sbjct: 191 RVFDKIGEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLG 250
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + G+ +H + K G D V TAL+DMY+K G L ++V FK++ +D W+A++
Sbjct: 251 ALDLGRWIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIV 310
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ HG +A + + M + +V+
Sbjct: 311 AYATHGHGSQAISMLREMKKAKVQ 334
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 4/143 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL--TAYTFTPVLGA 85
+ H++FD+I D+ N+ Y R + P L C C L YTF+ +L A
Sbjct: 87 HAHRMFDKIPQPDIVLFNTMARGYARFDD-PLRAILLCS-QVLCSGLLPDDYTFSSLLKA 144
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ L A E GKQ+H L +K G V L++MY+ + + F +I VV +
Sbjct: 145 CARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAY 204
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
NA+++S R+ EA +F+ +
Sbjct: 205 NAIITSCARNSRPNEALALFREL 227
>gi|218193589|gb|EEC76016.1| hypothetical protein OsI_13171 [Oryza sativa Indica Group]
Length = 950
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+ V ++F ++ +++S NS + Y ++R F F M ++ + TF+ VL
Sbjct: 459 KMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++L + E GK VHA +IK G V TAL DMY+K G L S F E+ ++ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
W A++ +G A+E+ +F+ M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDM 602
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V DE+ + S + + + + N +L+ M + F+ VLGAC++L
Sbjct: 332 RRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASL 391
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+++H +K + V +AL+DMY K L ++ F + K++V WN+L+
Sbjct: 392 QDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLI 451
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S + + EA +F+ M V
Sbjct: 452 SGYSNNSKMVEAEELFKKMPARNV 475
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDM 120
+F M S ++ T V+ AC + + L +K D V+ +L+ +
Sbjct: 231 GVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITL 290
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y + G + F E+E +DVV+W ALL + G + A V M ER E
Sbjct: 291 YLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP-ERNE 343
>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Glycine max]
Length = 758
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA---------- 76
V H++F+ + + + N+ + + + C+ S L L +
Sbjct: 321 VEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGSEALKLFSKLNLSGMKPD 380
Query: 77 -YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
+T + VL CS + A E+G+Q+HA IK G S+ +V T+L+ MYSK G + + +AF
Sbjct: 381 LFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLISMYSKCGSIERASKAFL 440
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
E+ + ++ W ++++ F +HG++++A +F+ M+
Sbjct: 441 EMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMS 474
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ YT + VL ACS+L + + G Q HA +IK D + V +AL +YSK G L ++++ F
Sbjct: 167 SVYTLSAVLHACSSLQSLKLGDQFHAYIIKYHVDFDASVGSALCSLYSKCGRLEDALKTF 226
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
I K+V++W + +S+ +G + +F M
Sbjct: 227 SRIREKNVISWTSAVSACADNGAPVKGLRLFVEM 260
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + +T T L C + + E G QV++L IK G +S V+ +L+ +Y
Sbjct: 256 LFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRVRNSLLYLYL 315
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLS 150
K G + E+ F ++ +VTWNA+++
Sbjct: 316 KSGCIVEAHRLFNRMDDASMVTWNAMIA 343
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 45/90 (50%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ P+L C + + VH ++K G V + L+++Y+K G + ++ F +
Sbjct: 70 YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++VV W L+ F+++ K A VFQ M
Sbjct: 130 RRNVVAWTTLMVGFVQNSQPKHAIHVFQEM 159
>gi|297737392|emb|CBI26593.3| unnamed protein product [Vitis vinifera]
Length = 459
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Query: 44 LNSQLFSYTRSRNFPATWALFCYMHSTCLNL--TAYTFTPVLGACSALPAPERGKQVHAL 101
L + F +NF A W L M S C +L + T VL ACS L + E G++VH
Sbjct: 187 LAEKFFGRVNEQNFEA-WNL---MFSFCEDLKPNSATLVSVLSACSHLASLEEGEKVHNY 242
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
+ G + + TAL+DMY+K G L +S E F + +DV+TWN ++S + HG A+ A
Sbjct: 243 INGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGMHGDARSA 302
Query: 162 FGVFQAM 168
FQ M
Sbjct: 303 IEFFQQM 309
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 10 FPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
F A IS+ + K T ++FDEI H D NS + ++ + + + +M +
Sbjct: 68 FIASKLISLYASFHKPSCST-ELFDEIPHRDAFLWNSIIKAHFSNGEYSRALDFYQWMRA 126
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLG 128
+ +T ++ +C+ L G+ +H L+ K G S +V+ AL+ MY K+G L
Sbjct: 127 SEALPNHFTIPMIVASCAELELVNYGRSIHGLVSKLGLFSGNQMVQNALLSMYCKFGFLK 186
Query: 129 ESVEAFKEIEFKDVVTWNALLS 150
+ + F + ++ WN + S
Sbjct: 187 LAEKFFGRVNEQNFEAWNLMFS 208
>gi|255545044|ref|XP_002513583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547491|gb|EEF48986.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 567
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 70/129 (54%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS L Y ++ L+ M + ++ T TF+ + ACS + + ++GK +HA +IK
Sbjct: 399 NSMLSGYVQNEQHEEALKLYVTMKRSSVDCTRSTFSVLFRACSYIGSLQQGKMLHANLIK 458
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
S V T+L+DMYSK G + ++ ++F I +V W AL++ + HG EA +
Sbjct: 459 TPFASNVYVGTSLVDMYSKCGSIFDAKKSFSSISAPNVAAWTALINGYAHHGFGSEAILL 518
Query: 165 FQAMTRERV 173
FQ M ++V
Sbjct: 519 FQHMLEQKV 527
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 78/153 (50%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A+ + + +FD++ S N+ + SY + F +++L MH + L TF+
Sbjct: 46 AIKGQLDFARCLFDKMPQRTSVSWNTMISSYLKWGKFKESFSLLSLMHRSNTQLDETTFS 105
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L C+ + GKQ+H L++K G S +V + L+ Y + ++ F E+ K
Sbjct: 106 TILSVCTRTQSFCDGKQIHCLVLKSGCGSFELVGSVLLYFYGNCSQIDDAKRVFDELHDK 165
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ V W++++ +++ GL +A+ +F M ++ V
Sbjct: 166 NEVVWSSMVVCYVQRGLLTDAYDLFVKMPKKEV 198
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 42/95 (44%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T V+ C L A G VH ++IK G + + + AL+ Y + ++ +
Sbjct: 236 FTLDSVIRVCGKLGALSEGMVVHGILIKTGFEFDQSISGALVQFYCDCEAIDDAKRIYDG 295
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
I + N+L+ ++ G K+A +F T +
Sbjct: 296 IAYPCSSASNSLIEGYVLLGRIKDADLIFNRATEK 330
>gi|108710611|gb|ABF98406.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 787
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+ V ++F ++ +++S NS + Y ++R F F M ++ + TF+ VL
Sbjct: 459 KMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++L + E GK VHA +IK G V TAL DMY+K G L S F E+ ++ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
W A++ +G A+E+ +F+ M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDM 602
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 68/145 (46%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+V DE+ + S + + + + N +L+ M + F+ VLGAC++
Sbjct: 331 ARRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACAS 390
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L G+++H +K + V +AL+DMY K L ++ F + K++V WN+L
Sbjct: 391 LQDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSL 450
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+S + + EA +F+ M V
Sbjct: 451 ISGYSNNSKMVEAEELFKKMPARNV 475
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDM 120
+F M S ++ T V+ AC + + L +K D V+ +L+ +
Sbjct: 231 GVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITL 290
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y + G + F E+E +DVV+W ALL + G + A V M ER E
Sbjct: 291 YLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP-ERNE 343
>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 882
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 71/124 (57%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + +++++ FP + + + ++ YTF V+ AC+ L E G V+ ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G +S+ V AL+DMYS+ GLL + + F E+ +D+V+WN+L+S + HG +EA +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 165 FQAM 168
+ +
Sbjct: 195 YHEL 198
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+++AL Y +V F + GD + N+ + + R +F + M
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + TF L C++L A GK++H +++ G +SE + AL++MYSK G L
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S F+ + +DVVTW ++ ++ +G ++A F M + +
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY-----T 78
+R +VFDE+ D S N+ + Y + + +F NL + T
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE------NLDQFKPDLLT 309
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ VL AC L K ++ M+K G E V+ L+D+Y+K G + + + F +E
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KD V+WN+++S +++ G EA +F+ M
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ VF+ + D S NS + Y +S + LF M T+ ++
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L + GK +H+ IK G + V AL+DMY+K G +G+S++ F + D VTWN
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
++S+ +R G V M + V
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEV 505
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 71/136 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFDE+ DL S NS + Y+ + ++ + ++ + ++T + VL A L
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
++G+ +H +K G +S VV L+ MY K+ ++ F E++ +D V++N ++
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 150 SSFLRHGLAKEAFGVF 165
+L+ + +E+ +F
Sbjct: 281 CGYLKLEMVEESVRMF 296
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLR 154
+++HAL+I G DS L+D YS + S+ F+ + K+V WN+++ +F +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 155 HGLAKEAFGVFQAMTRERV 173
+GL EA + + +V
Sbjct: 84 NGLFPEALEFYGKLRESKV 102
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F EIS D + + + Y + + +++ M + + YTF ++ A S L
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+HA ++K + V T+L+DMY K G + ++ F++++ + VV WNA+L
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+HG EA +F+ M ++
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNGIQ 1298
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL+S N+ +F Y +S F MH + + T + A L ++GKQ+
Sbjct: 1063 DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQ 1122
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A IK G +++ V + ++DMY K G + ++E F EI D V W ++S ++ +G
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDED 1182
Query: 160 EAFGVFQAMTRERVE 174
A V+ M V+
Sbjct: 1183 HALSVYHLMRVSGVQ 1197
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR-----SRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
QVFD+ S DL + NS L +Y + N + LF + ++T T P+L
Sbjct: 667 QVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKL 726
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + + VH +K G + + V AL+++Y KYGL+G++ F ++ +D V W
Sbjct: 727 CLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLW 786
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N +L +++ + EA F A R
Sbjct: 787 NVMLKAYVENSFQDEALRFFSAFHR 811
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD+ S ++ + N +L + + A F + + + + T +L A
Sbjct: 853 FDQGS--NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G+Q+HAL+IK V +LM+MYSK G++ + + F D+++WN ++SS+
Sbjct: 911 DLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSY 970
Query: 153 LRHGLAKEAFGVFQAMTRE 171
++ L EA F+ + R+
Sbjct: 971 AQNNLEMEAICTFRDLLRD 989
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPER---GK 96
DL S N+ + SY ++ F + L +T VL ACS E G
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
QVH IK G ++ V TAL+D+YSK G + E+ D+ +WNA++ +++
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 157 LAKEAFGVFQAM 168
+++A F M
Sbjct: 1079 KSRKALEHFSLM 1090
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GK+ HA ++ G + + L+ MYSK G L + + F + +D+VTWN++L+++
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAY 687
>gi|413955987|gb|AFW88636.1| hypothetical protein ZEAMMB73_169634 [Zea mays]
Length = 555
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+Q+F + DL S NS + RS + +F + S+ L ++F+ VL AC+
Sbjct: 140 YQIFKRMPVKDLISWNSMIAGAVRSSHLKEAMNIFSRLVSSGLVPDCFSFSSVLSACARA 199
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G VH LM + G + ++ +AL+DMY+K G + + E F +++ + WN ++
Sbjct: 200 GARRYGVWVHHLMTELGVEMNHILSSALVDMYAKCGRIDVATEIFNKVKGNHISVWNTMI 259
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S HGL + +F M E +
Sbjct: 260 SGLASHGLGSDVVILFHKMKSEEL 283
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+++ +S N+ + LF M S L TF +L ACS
Sbjct: 242 EIFNKVKGNHISVWNTMISGLASHGLGSDVVILFHKMKSEELVPDGVTFVALLTACSRCG 301
Query: 91 APERGKQ-VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E + ++ + E AL+D S+ GLL E+ E + K DVV W AL
Sbjct: 302 MVEEARHYFRSMTTEYSITPEVEHYGALVDTLSRAGLLDEAYELVMSMNVKPDVVIWRAL 361
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
LS+ R+ K + M
Sbjct: 362 LSACRRYRHTKLGEATIEHM 381
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 35/62 (56%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+++P ++ + K G L ++ + FK + KD+++WN++++ +R KEA +F
Sbjct: 117 NTDPFHGNLMLMGFLKSGRLDKAYQIFKRMPVKDLISWNSMIAGAVRSSHLKEAMNIFSR 176
Query: 168 MT 169
+
Sbjct: 177 LV 178
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F EIS D + + + Y + + +++ M + + YTF ++ A S L
Sbjct: 1155 ELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASSCLT 1214
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GKQ+HA ++K + V T+L+DMY K G + ++ F++++ + VV WNA+L
Sbjct: 1215 ALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLL 1274
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+HG EA +F+ M ++
Sbjct: 1275 GLAQHGHVDEALNLFRTMQSNGIQ 1298
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL+S N+ +F Y +S F MH + + T + A L ++GKQ+
Sbjct: 1063 DLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQ 1122
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A IK G +++ V + ++DMY K G + ++E F EI D V W ++S ++ +G
Sbjct: 1123 AYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDED 1182
Query: 160 EAFGVFQAMTRERVE 174
A V+ M V+
Sbjct: 1183 HALSVYHLMRVSGVQ 1197
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR-----SRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
QVFD+ S DL + NS L +Y + N + LF + ++T T P+L
Sbjct: 667 QVFDKSSDRDLVTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKL 726
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + + VH +K G + + V AL+++Y KYGL+G++ F ++ +D V W
Sbjct: 727 CLLSGFVQVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLW 786
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N +L +++ + EA F A R
Sbjct: 787 NVMLKAYVENSFQDEALRFFSAFHR 811
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD+ S ++ + N +L + + A F + + + + T +L A
Sbjct: 853 FDQGS--NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDL 910
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G+Q+HAL+IK V +LM+MYSK G++ + + F D+++WN ++SS+
Sbjct: 911 DLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDLISWNTMISSY 970
Query: 153 LRHGLAKEAFGVFQAMTRE 171
++ L EA F+ + R+
Sbjct: 971 AQNNLEMEAICTFRDLLRD 989
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 3/132 (2%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPER---GK 96
DL S N+ + SY ++ F + L +T VL ACS E G
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGS 1018
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
QVH IK G ++ V TAL+D+YSK G + E+ D+ +WNA++ +++
Sbjct: 1019 QVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN 1078
Query: 157 LAKEAFGVFQAM 168
+++A F M
Sbjct: 1079 KSRKALEHFSLM 1090
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GK+ HA ++ G + + L+ MYSK G L + + F + +D+VTWN++L+++
Sbjct: 630 GKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAY 687
>gi|255546694|ref|XP_002514406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546503|gb|EEF48002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 436
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 2/137 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+ GDL NS + + ++ + LF M T VL AC+ L
Sbjct: 212 VFNEMVTGDLIVWNSIIAGFAQNNDGDEALNLFKSMKRNGFPANQSALTSVLRACTGLAL 271
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+QVH + K D + V+ AL+DMY K G L ++ F + KDV++W+ +++
Sbjct: 272 LELGRQVHVHVFK--HDQDLVLNNALLDMYCKCGSLEDANYVFTRMVEKDVISWSTMIAG 329
Query: 152 FLRHGLAKEAFGVFQAM 168
F ++G ++EA +F++M
Sbjct: 330 FAQNGYSREALKLFESM 346
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 79/141 (56%), Gaps = 5/141 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSR-NFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD++ ++ S + + +++ ++ N A L C + + YT++ +L AC +
Sbjct: 114 LFDQMPERNVVSWTTMISAFSNAKLNDKALEFLICMLREG-VKPNVYTYSSILRACDGVY 172
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+Q+H +IK G DS+ V++AL+D+YSK+G ++ F E+ D++ WN++++
Sbjct: 173 NL---RQLHGNIIKSGLDSDVYVRSALIDIYSKWGESENALYVFNEMVTGDLIVWNSIIA 229
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F ++ EA +F++M R
Sbjct: 230 GFAQNNDGDEALNLFKSMKRN 250
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 65/133 (48%)
Query: 42 SSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHAL 101
SSL + + R+ P MH + ++T++ ++ C A A E+GKQV+
Sbjct: 23 SSLLREFTEFCYQRDLPRAMKAMDAMHKHGIWADSFTYSELIKCCLARNAIEQGKQVYKH 82
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
+ G + L++MY K+ LL E++ F ++ ++VV+W ++S+F L +A
Sbjct: 83 LSSNGYQPNIFLINMLLNMYVKFNLLDEALTLFDQMPERNVVSWTTMISAFSNAKLNDKA 142
Query: 162 FGVFQAMTRERVE 174
M RE V+
Sbjct: 143 LEFLICMLREGVK 155
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 72/134 (53%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHA 100
+ S N+ + ++ + + F +M + +T+ VL C+ L GKQ+HA
Sbjct: 526 MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHA 585
Query: 101 LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKE 160
MIK S+ + + L+DMYSK G + +S+ F++ +D VTWNA++ F HGL +E
Sbjct: 586 QMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEE 645
Query: 161 AFGVFQAMTRERVE 174
A +F+ M E ++
Sbjct: 646 ALELFEHMLHENIK 659
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 76/160 (47%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +++DA +++F + +L S N+ + Y R+ + LF + +
Sbjct: 306 CDNMSDA--------YKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSF 357
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ + L A + + G Q+H L IK S V A++DMY K G L E+ F
Sbjct: 358 DEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLF 417
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
E+E +D V+WNA++++ ++ + F AM R ++E
Sbjct: 418 DEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME 457
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 75/150 (50%), Gaps = 1/150 (0%)
Query: 25 RYVYTHQVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
R VF+ + HGD+ S NS + Y ++ + + A+F M + T L
Sbjct: 105 RMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSL 164
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
CS L G Q+H + ++ G D + V +AL+DMY+K L +S++ F E+ K+ +
Sbjct: 165 KICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWI 224
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+W+A ++ +++ +F+ M R+ +
Sbjct: 225 SWSAAIAGCVQNDQLLRGLKLFKEMQRKGI 254
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 8 TNFPAKTCISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
+N + C+ A+A+ Y V +FDE+ D S N+ + + ++ + T
Sbjct: 388 SNLSSNICV--ANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTL 445
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
+ F M + + +T+ VL AC+ A G +VH +IK G + V +AL+DMY
Sbjct: 446 SHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMY 505
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
SK G++ E+ + +E + +V+WNA++S F ++++ F M VE
Sbjct: 506 SKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVE 558
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 74/161 (45%), Gaps = 8/161 (4%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ D+L VF E+ + S ++ + ++ LF M + +
Sbjct: 205 CNSLEDSL--------DVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGV 256
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T+ V +C+ L A G Q+H +K S+ +V TA +DMY+K + ++ + F
Sbjct: 257 SQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLF 316
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ ++ ++NA++ + R+ +AF +F + + F
Sbjct: 317 SLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSF 357
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF+ + CS A + GK+ HA MI G V L+ MY K L + + F+E+
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+D+V+WN ++ G + A VF +M
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSM 116
>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
Length = 824
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + D S + L +Y++ T LF M + F VL C+ + A
Sbjct: 408 IFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRSAFACVLSTCADIAA 467
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q+H+ +IK G V AL+ MY K G + E+ AF+E+E +DVV+WN +++
Sbjct: 468 LECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCGSMEEAHSAFEEMEERDVVSWNTMIAG 527
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ RHG KEA VF M +
Sbjct: 528 YARHGFGKEALEVFDTMRK 546
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 2/129 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
H F+E+ D+ S N+ + Y R +F M T T VL ACS
Sbjct: 506 AHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLAACSH 565
Query: 89 LPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
E+G M + G ++P T ++D+ + G L E+V K++ F+ D W
Sbjct: 566 SGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWG 625
Query: 147 ALLSSFLRH 155
ALL + H
Sbjct: 626 ALLGASRIH 634
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 14/158 (8%)
Query: 20 DALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
+AL YV Q+ F+++ D+ S N+ + Y R + LF
Sbjct: 266 NALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLF----DVAPI 321
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+T+T ++ + E K+V M D V A+M Y + ++ E+ E
Sbjct: 322 RDVFTWTAIVSGYAQNGMLEEAKRVFDAM----PDKNAVSWNAMMAAYVQRRMMEEAKEL 377
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + ++V +WN +L+ + + G+ EA +F M ++
Sbjct: 378 FDAMPCRNVASWNTMLTGYAQAGMLDEARAIFGMMPQK 415
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%)
Query: 107 TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
T+ + + ALM Y + + E+ + F ++ +DVV+WN ++S + R G EA +F
Sbjct: 258 TEWDAISWNALMAGYVQRSQIEEAQKMFNKMPQRDVVSWNTMVSGYARRGDMAEARRLFD 317
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
Y++ G+L E+ F + KD V+W A+L+++ + G ++E +F+ M R
Sbjct: 396 YAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGR 445
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 34/60 (56%)
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ V ++ ++ +GL+ + F KD V+WN +L++++R+G +EA +F + T
Sbjct: 199 DSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRIQEARELFDSRT 258
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 73/138 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD ++ D+ S ++ + Y + + + +M + VL C ++
Sbjct: 410 VFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMAL 469
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQVHA + G D E +V +AL+ MYS+ G L E+ + F I+ D+V+W A+++
Sbjct: 470 LEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMING 529
Query: 152 FLRHGLAKEAFGVFQAMT 169
+ HG ++EA +F+ ++
Sbjct: 530 YAEHGYSQEAISLFENIS 547
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F ++S D+ S + + +Y + + F M + ++ YTF V+ AC+
Sbjct: 305 YVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACA 364
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G+Q+H ++ G V +++ +YSK GLL E+ F + KD+++W+
Sbjct: 365 NLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWST 424
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++S + + AKEAF M+RE
Sbjct: 425 IISVYCQGSHAKEAFNYLSWMSRE 448
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSAL 89
+F+++SH D S + + Y + N LF M + L + + L AC+
Sbjct: 105 DMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALG 164
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K G + V +AL+DMY K G + F+ + ++VV+W A++
Sbjct: 165 MNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVI 224
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
+ G + + F M R +V +
Sbjct: 225 VGLVHAGCSLDGLSYFSEMWRSKVGY 250
Score = 44.3 bits (103), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M + + ++TF L A + GK +HA IK G + V L MYSK
Sbjct: 240 FSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSK 299
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F ++ DVV+W L+ ++++ G + A F+ M + V
Sbjct: 300 CRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDV 349
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 10/146 (6%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD I + D+ S + + Y +LF + S L TF +L AC+
Sbjct: 510 KIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAG 569
Query: 91 APERGKQVHALMIKGGTDSEPVVKT-----ALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
+ G + LM T+ + + ++D+ + G L E+ + + F D V
Sbjct: 570 LVDLGFYYYKLM----TNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVV 625
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTR 170
W+ LL + HG A + M R
Sbjct: 626 WSTLLRACRDHGDLDRAIWAAEQMLR 651
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 77/146 (52%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +VFD + + D+ + N+ + Y ++ LF M + T VL AC
Sbjct: 281 ISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRVTMIEVLSAC 340
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S + A + GK V + G + V +AL+DMY+K G L ++V F+ + K+ V+WN
Sbjct: 341 STIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESMPHKNEVSWN 400
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRER 172
A++S+ HG A+EA +F+ M+++
Sbjct: 401 AMISALAFHGQAQEALSLFRRMSKDN 426
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 68/141 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ +VFDE+ DL S NS + Y++ LF M T VLGAC
Sbjct: 181 FARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGFEPDEMTLVSVLGACG 240
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L G+ V +++ + + +AL+DMY K G L + F + KDVVTWNA
Sbjct: 241 DLGDLGLGRWVEGFVLEKKMEVNSYMGSALIDMYGKCGDLISARRVFDSMPNKDVVTWNA 300
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+++ + ++G + EA +F M
Sbjct: 301 IITGYAQNGASNEAIVLFNGM 321
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 18/181 (9%)
Query: 1 MLSFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPAT 60
+++ I NF I + D Y VF++++ ++ + N L R T
Sbjct: 57 LINSIPKPNFLLSKIIDLKD-----LAYASLVFNQLTKPNIYAFNVML------RGLATT 105
Query: 61 WAL--FC---YMHSTCLNLTAYTFT-PVL-GACSALPAPERGKQVHALMIKGGTDSEPVV 113
W FC Y L L A FT P L AC + GK H L+ K G D + V
Sbjct: 106 WKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGHCLVFKAGLDGDEYV 165
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+L+ MY++ G +G + + F E+ +D+V+WN+++S + + G KEA G+F M E
Sbjct: 166 NHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTKEAIGLFMEMREEGF 225
Query: 174 E 174
E
Sbjct: 226 E 226
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+FDE S +++ N+ + Y +S +LF M +T T T +L AC+ L
Sbjct: 361 QLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLG 420
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK VH L+ + V TAL+DMY+K G + E+ + F K+ VTWN ++
Sbjct: 421 ALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIF 480
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG EA +F M
Sbjct: 481 GYGLHGYGDEALKLFNEM 498
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A SA P G +HA + G DS V +AL+D+Y K+ + + + F ++ +D V
Sbjct: 112 AISASPDDNLGMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVL 171
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
WN +++ +R+ ++ VF+ M + V
Sbjct: 172 WNTMITGLVRNCCYDDSVQVFKDMVAQGVRL 202
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+ +K GT +P V TAL +YS+ + + + F E K V WNA++S + + GL
Sbjct: 327 IQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMISGYAQSGL 386
Query: 158 AKEAFGVFQAM 168
+ A +FQ M
Sbjct: 387 TEMAISLFQEM 397
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y +VFD++ D N+ + R+ + + +F M + + L + T VL
Sbjct: 153 RVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQGVRLDSTTVATVLP 212
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A + + + G + L +K G + V T L+ ++SK + + F I D+V+
Sbjct: 213 AVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTARLLFGMIRKPDLVS 272
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
+NAL+S F +G + A F+ +
Sbjct: 273 YNALISGFSCNGETECAVKYFREL 296
>gi|357464861|ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
gi|355491760|gb|AES72963.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
Length = 867
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNL-TAYTFTPVLGACS 87
H++FD+ D N L Y+RS +N +F MHS+ + ++ T VL C+
Sbjct: 92 HKLFDQFGRCDPVIWNIVLSGYSRSGKNDADVMKVFRAMHSSGEVMPSSVTIATVLPVCA 151
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG-ESVEAFKEIEFKDVVTWN 146
GK VH +IK G + + AL+ MY+K GL+ ++ F I KDVV+WN
Sbjct: 152 RSGNLNGGKSVHGYVIKSGFEMDTFAGNALVSMYAKCGLVACDAYAVFDSIIHKDVVSWN 211
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A+++ +GL KEAF +F M + V+
Sbjct: 212 AMIAGLAENGLLKEAFSLFSLMMKGSVK 239
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+L +CSAL A GK +H+ ++K G S V AL++MY+K G+L + + F +
Sbjct: 39 VLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQF 98
Query: 138 EFKDVVTWNALLSSFLRHGLAK-EAFGVFQAM 168
D V WN +LS + R G + VF+AM
Sbjct: 99 GRCDPVIWNIVLSGYSRSGKNDADVMKVFRAM 130
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 4/145 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ F IS DL S NS L ++ R+ +L M + + T ++ C++L
Sbjct: 404 YHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCASL 463
Query: 90 PAPERGKQVHALMIKGGT---DSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTW 145
++ K++H I+ G+ + P V A++D YSK G + + + F+ + E +++VT
Sbjct: 464 LRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYANKMFQNLSEKRNLVTC 523
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N+L+S ++ G +A +F M+
Sbjct: 524 NSLISGYVGLGSHYDANMIFSGMSE 548
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSALPAPERGKQV 98
DL S N+ + Y + + + +F + S L L + T +L AC+ L + GKQV
Sbjct: 311 DLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEMLLLDSVTMVSILPACAQLDNLQAGKQV 370
Query: 99 HALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
HA +++ E AL+ Y+K G + E+ F I KD+++WN++L +F
Sbjct: 371 HAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAF 425
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ +F +S DL++ N + Y + LF + + + T ++ C+ +
Sbjct: 540 NMIFSGMSETDLTTWNLMVRVYAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQM 599
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +Q H +I+ + + +K L+D Y+K G++G + + F+ KD+V + A++
Sbjct: 600 ASVHLLRQCHGYIIRSSFE-DLHLKGTLLDAYAKCGIIGYAYKIFQSSVDKDLVMFTAMI 658
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ HG++++A F M
Sbjct: 659 GGYAMHGMSEKALETFSHM 677
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ VFD I H D+ S N+ + + ++LF M + T +L C++
Sbjct: 196 YAVFDSIIHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPNYATVANILPVCASF 255
Query: 90 P---APERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
A G+Q+H+ +++ S V V AL+ Y K G E+ F ++ +D+V+W
Sbjct: 256 DENIAHRCGRQIHSYVLQWPELSADVSVCNALLSFYLKVGRTKEAESLFWAMDARDLVSW 315
Query: 146 NALLSSFLRHGLAKEAFGVF 165
N +++ + +G ++ VF
Sbjct: 316 NTIIAGYALNGEWLKSLHVF 335
>gi|302783272|ref|XP_002973409.1| hypothetical protein SELMODRAFT_34484 [Selaginella moellendorffii]
gi|300159162|gb|EFJ25783.1| hypothetical protein SELMODRAFT_34484 [Selaginella moellendorffii]
Length = 292
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ S N + +Y LF M + +F VL C+
Sbjct: 36 LFDSMPKKDVISWNVIISAYAHKGQDREALELFWRMD---VKPDCISFLVVLDVCANSTI 92
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK++HA I G DS V TAL++MY K GLLG ++E F+++E K+V+ W A++++
Sbjct: 93 LEQGKRLHATAISHGLDSNTKVATALINMYGKCGLLGVALELFEKLEDKEVMAWTAMVAA 152
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +G K VF M E VE
Sbjct: 153 YGYNGQGKAGLMVFHRMVMEGVE 175
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VH + G + L+DMY G + F + KDV++WN ++S++ G
Sbjct: 1 VHDHIDTSGYKGHTFLGNLLVDMYGSCGNWEAAKALFDSMPKKDVISWNVIISAYAHKGQ 60
Query: 158 AKEAFGVFQAM 168
+EA +F M
Sbjct: 61 DREALELFWRM 71
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD+ D+ N+ + Y+R F ++ M C++ ++F VL ACSALP
Sbjct: 128 KLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLKACSALP 187
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G++VH + + G +S+ V+ L+ +Y+K G + + F + + +V+W +++S
Sbjct: 188 ALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIIS 247
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G EA +F M + V
Sbjct: 248 GYAQNGQPIEALRIFSEMRKTNVR 271
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 68/141 (48%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+++ + L N+ + Y ++ LF M S + + T T + AC+ + +
Sbjct: 332 FNQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSL 391
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E + + + ++ +V T+L+D Y+K G + + F I KDVV W+A++ +
Sbjct: 392 ELARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGY 451
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
HG +E+ +F AM + V
Sbjct: 452 GLHGQGRESIILFHAMRQAGV 472
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V + VF + + S S + Y ++ +F M T + VL A
Sbjct: 225 VRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAY 284
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + E GK +H +IK G + E + +L +Y+K G + + F ++E ++ WN
Sbjct: 285 TDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWN 344
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
A++S ++++G A+EA +F+ M + +
Sbjct: 345 AMISGYVKNGYAEEAIELFRLMKSKNIR 372
>gi|255561305|ref|XP_002521663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539054|gb|EEF40650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 578
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + D+ +S + SY RS + LF +M + + T V+ AC+ L +
Sbjct: 288 FERSNVKDVVMWSSIIGSYCRSADSIEALKLFRWMRADGTEPNSVTLLAVITACTTLTSL 347
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G H ++K G + + + AL++MYSK G + S + FKE+ KD V+W+ L++++
Sbjct: 348 KNGYGTHGYIVKCGLNFDTYIGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAY 407
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
HG KEA +F M + VE
Sbjct: 408 GLHGHGKEALCLFHEMQLQGVE 429
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 56/102 (54%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
+HS+ + AY V+ ACS G Q++++++K G DS+ V+ + + Y+K
Sbjct: 17 LHSSDIYANAYIIPSVIKACSFSNCHHFGIQLYSIVLKSGLDSDFVICNSFISFYAKSSC 76
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ F + KD ++WN +++ + ++G + F +F+ M
Sbjct: 77 TESALKVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEM 118
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 4/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D S N + Y ++ F + +F M+ + V+ C L
Sbjct: 82 KVFDTMPLKDPISWNCIINGYFQNGYFTQGFIMFKEMYECGIVPKPELVASVVSVCVRLG 141
Query: 91 APERGKQVHAL-MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +HAL +I G E V T+L+D Y K G ++ F +IE K+VV+W AL+
Sbjct: 142 DMKLGRAIHALVLIDGRIAKEIFVLTSLVDWYFKSGDSLMALRVFDQIEVKNVVSWTALV 201
Query: 150 ---SSFLRHGLAKEAFGVFQ 166
S+ L + +A + F Q
Sbjct: 202 SGCSANLDYNMALDCFRAMQ 221
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 68/146 (46%), Gaps = 3/146 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+I ++ S + + + + ++ F M + T +L A + L
Sbjct: 184 RVFDQIEVKNVVSWTALVSGCSANLDYNMALDCFRAMQINGVRPNRVTLIAILPAFAELG 243
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMY--SKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ GK++H + G D + ++L+ +Y S+ GL + F+ KDVV W+++
Sbjct: 244 CAKTGKEIHGYAFRHGFDLDHHFLSSLIHIYCRSREGLQLAKL-TFERSNVKDVVMWSSI 302
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ S+ R + EA +F+ M + E
Sbjct: 303 IGSYCRSADSIEALKLFRWMRADGTE 328
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 18 IADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
I +AL Y V +HQ+F E+ D S ++ + +Y + LF M
Sbjct: 368 IGNALINMYSKCGCVVASHQIFKEMHIKDSVSWSTLITAYGLHGHGKEALCLFHEMQLQG 427
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA-LMDMYSKYGLLGES 130
+ A TF VL AC+ + G+Q+ + K G S V A L+D+ K G + ++
Sbjct: 428 VEPDAMTFLAVLSACNHSGLVKEGQQIFDNVKKDGKVSLTVEHYACLVDLLGKSGKVDDA 487
Query: 131 VEAFKEIEFKDVVT-WNALLSSFLRHG 156
+ + + K T W++L+S+ HG
Sbjct: 488 FDILRAMPMKPSTTIWSSLVSACKIHG 514
>gi|224087027|ref|XP_002308034.1| predicted protein [Populus trichocarpa]
gi|222854010|gb|EEE91557.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ + DL LN + Y ++ +F Y+ S L+ YTFT ++ C+
Sbjct: 65 EKVFNGVGCKDLRCLNCMILEYGKAGYEKRAIGVFIYLISVGLDPNDYTFTNIISTCNV- 123
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E GKQ+H L +K G + V A++ MY K G++ E+ F + K++++W AL+
Sbjct: 124 ---EEGKQLHGLAVKYGVLLQTSVGNAVITMYGKNGMVEEAARMFSVMNKKNLISWTALI 180
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + R+G ++A F + VE
Sbjct: 181 SGYTRNGYGEKAVDGFLELRGCGVE 205
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 1/149 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTPV 82
K + VF+ +S +S N+ L + + N + + + +F+ +
Sbjct: 257 KNFQSARTVFNGLSPRSTASFNAILVGFIENDSNEEDPMVFLSQLRLAGIKPDSVSFSRL 316
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L + + +G+ +HA IK G V AL+ MY+K G++ ++ +AF + D
Sbjct: 317 LSLSANRASLVKGRGLHAYSIKTGFAGHISVSNALITMYAKCGIVEDAYQAFNSMSANDC 376
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++WNA++S++ HG ++A ++Q M +
Sbjct: 377 ISWNAIISAYSLHGQGEKALLLYQEMEEK 405
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T +L ACS + G+Q+H +IK G + V T+L+ MYS+ G E+ + F
Sbjct: 11 HTCVVILQACSDIGDVVLGEQIHGFVIKSGFEENVFVGTSLISMYSRSGNFDEAEKVFNG 70
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ KD+ N ++ + + G K A GVF
Sbjct: 71 VGCKDLRCLNCMILEYGKAGYEKRAIGVF 99
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F ++ +L S + + YTR+ F + + + +L CS
Sbjct: 163 RMFSVMNKKNLISWTALISGYTRNGYGEKAVDGFLELRGCGVECDSGLLATILDGCSECK 222
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+H L+IK G + + TAL+D+Y+K + F + + ++NA+L
Sbjct: 223 NLDLGTQIHGLVIKLGYPCDINIGTALIDLYAKCKNFQSARTVFNGLSPRSTASFNAILV 282
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
F+ + +E VF + R
Sbjct: 283 GFIENDSNEEDPMVFLSQLR 302
>gi|225441789|ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
[Vitis vinifera]
Length = 564
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY---MHSTCLNLTAYTFTPVLG 84
Y ++F +I ++ S NS + ++S+ P+ + + + N +T VL
Sbjct: 42 YARKLFSQIQRPNIFSWNSMIRGCSQSQT-PSKEPVILFRKMVRRGYPNPNTFTMAFVLK 100
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS + A E G+QVHA ++K G S P V+TAL++ Y+K + + + F EI +++V
Sbjct: 101 ACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVA 160
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
W+ ++S + R GL EA G+F+ M + V
Sbjct: 161 WSTMISGYARIGLVNEALGLFRDMQKAGV 189
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFDEI+ +L + ++ + Y R LF M + T V+ AC
Sbjct: 144 VLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISAC 203
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+A A + GK VHA + K +++ + TAL++MY+K G + + E F + KD W+
Sbjct: 204 AASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWS 263
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ +GLA++A F M +V+
Sbjct: 264 SMIVGLAINGLAEDALEEFFRMEEAKVK 291
>gi|302822841|ref|XP_002993076.1| hypothetical protein SELMODRAFT_136503 [Selaginella moellendorffii]
gi|300139076|gb|EFJ05824.1| hypothetical protein SELMODRAFT_136503 [Selaginella moellendorffii]
Length = 276
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
++ V +FD++ + S NS + +YT++ + +F M + TF +
Sbjct: 9 EKCVDARNLFDQMPVKGVFSWNSMISAYTQNGHSKEALCVFREMDLEGVRAEEITFATAV 68
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+ +P+ G+ +H G D + VV +AL++MYSK G L + F+++ K+ +
Sbjct: 69 DACAGIPSLRDGEAIHRCAADEGLDCDVVVGSALINMYSKCGRLDRARGFFEKMAVKNTI 128
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TWN L++++ R+ ++ +FQ M + +E
Sbjct: 129 TWNTLITAYARNAPPQQTLQIFQEMQQHGIE 159
>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
Length = 627
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFDE+ H ++ S + ++ YT+ LF L++ +T + V+ C +
Sbjct: 211 NVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSAT 270
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GKQ+H L K D V ++L+ +YSK GL+ + F E+ K++ WNA+L
Sbjct: 271 LLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIEGAYRVFDEVPIKNLGMWNAMLI 330
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +H KEAF +F M
Sbjct: 331 ACAQHAHTKEAFDLFTKM 348
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ NF +KT LP + + QVF+E ++ +S + S+ ++ FC
Sbjct: 95 LINFYSKT------QLP---LLSSQVFEESERKSSTTWSSVISSFAQNEEPVLAIQYFCR 145
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M L + F AC+ L + GK VH L+IK G D + V ++L+DMY+K G
Sbjct: 146 MIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGD 205
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
+ E+ F E+ ++VV+W+ ++ + + G +EA +F+
Sbjct: 206 IKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFK 245
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+G+Q+HA +IK G P+V L++ YSK L S + F+E E K TW++++SSF
Sbjct: 72 KGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFA 131
Query: 154 RH 155
++
Sbjct: 132 QN 133
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VFDE+ +L N+ L + + + + LF M + + TF VL ACS
Sbjct: 311 YRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHA 370
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKDVVT-WN 146
E GK+ ALM K + EP + +++D+ + G L E++ K + + + W
Sbjct: 371 GLVEEGKKYFALMKK--YEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWG 428
Query: 147 ALLSSFLRHG 156
A ++ HG
Sbjct: 429 AFITGCRIHG 438
>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSA 88
H +FDE+ D S S L +Y +++ T ++F YM +T L + + +L AC++
Sbjct: 57 HYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACAS 116
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + GKQVHA + + VVK++L+DMY+K GL + F I K V+W A+
Sbjct: 117 LCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAM 176
Query: 149 LSSFLRHGLAKEAFGVF 165
LS + R GL EA +F
Sbjct: 177 LSGYARSGLKDEAMELF 193
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 53/97 (54%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+ V+GAC+ L GKQ+H L+I G +S + AL+DMY+K + + F +
Sbjct: 239 VLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRM 298
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+DVV+W +++ +HG AKEA ++ M ++
Sbjct: 299 LHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIK 335
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C+ AP K++HA ++K G + + L+D Y K LL ++ F E+ +D
Sbjct: 9 LKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQRDH 68
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM-TRERVE 174
V+W ++L+++ + L + +F M T +R++
Sbjct: 69 VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQ 101
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 8/152 (5%)
Query: 13 KTCISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
++C+ I++AL Y + VF+ + H D+ S S + + L+
Sbjct: 269 ESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQ 328
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + TF ++ ACS +G+++ MI+ S + + T +D+ S+ G
Sbjct: 329 MVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSG 388
Query: 126 LLGESVEAFKEIEFK-DVVTWNALLSSFLRHG 156
L E+ + K + K D TW ALLS+ HG
Sbjct: 389 HLNEAEDLIKTMPHKPDEPTWAALLSACKHHG 420
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 73/139 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E++ D+ S ++ + Y++ + + L +M T + VL AC +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+HA ++ G + +V +AL++MY K G + E+ F E D+V+W A+++
Sbjct: 435 LEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMING 494
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG ++E +F+ + R
Sbjct: 495 YAEHGYSREVIDLFEKIPR 513
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSAL 89
++FD++S D S + + Y + + LF M + L + + + AC
Sbjct: 70 RMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLN 129
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K G + V +AL+DMY+K G + E F E+ ++VV+W A++
Sbjct: 130 SDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAII 189
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
+ +R G KEA F M R RVE+
Sbjct: 190 TGLVRAGYNKEALVYFSEMWRSRVEY 215
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+++F A T ++ + K Y +F+++S D+ S + + + + F
Sbjct: 250 VSSFVANTLATMYNKCGK-LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIR 308
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + ++ YTF V+ C+ L E G+Q+HAL++ G + V+ ++M MY+K G
Sbjct: 309 MRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQ 368
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
L S F E+ +D+V+W+ +++ + + G EAF + M E
Sbjct: 369 LTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRME 413
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ ++ S + + R+ F M + + +YTF L AC+
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+++HA +K G D V L MY+K G L + F+++ +DVV+W +++
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ ++ G + A F M V
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDV 314
>gi|297832654|ref|XP_002884209.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330049|gb|EFH60468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 534
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF---------------------- 64
V H+VFDE+S D+ S NS L Y R LF
Sbjct: 161 VDAHKVFDEMSERDVISWNSLLSGYARLGQMKKAKGLFHLMIDKTIVSWTAMISGYTGIG 220
Query: 65 CY---------MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKT 115
CY M + + VL +C+ L + E GK +H + G + V
Sbjct: 221 CYVEAMDFFREMQLAGIEPDEISLISVLPSCAHLGSLELGKWIHMYAERRGLLKQTGVCN 280
Query: 116 ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AL++MYSK G+L ++++ F++ + KDV++W+ ++S + HG A AF F M R +V+
Sbjct: 281 ALIEMYSKCGMLSQAIQLFEQTKGKDVISWSTMISGYAYHGNAHRAFETFIEMQRAKVK 339
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 81/147 (55%), Gaps = 1/147 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGAC 86
Y ++F+++S+ ++ NS + +YT + + ++ + + +TF + +C
Sbjct: 60 YATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKTIEFPDRFTFPFMFKSC 119
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
++L + GKQVH + K G V + AL+DMY K+ L ++ + F E+ +DV++WN
Sbjct: 120 ASLGSCYLGKQVHGHLYKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMSERDVISWN 179
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
+LLS + R G K+A G+F M + +
Sbjct: 180 SLLSGYARLGQMKKAKGLFHLMIDKTI 206
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + ++ S + L +Y+++ F F M L YTF +L +C+ +
Sbjct: 286 KVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGLLPNEYTFAVLLNSCAGIS 345
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK +H + K G + +V AL++MYSK G + + + F E+ +D +TW+A++
Sbjct: 346 ALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHKVFLEMICRDSITWSAMIC 405
Query: 151 SFLRHGLAKEAFGVFQAM 168
HGL +EA VFQ M
Sbjct: 406 GLSHHGLGREALVVFQEM 423
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M C+ T+ G CS L G QVH M + G + + V +A++DMY K G
Sbjct: 221 MVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDSFVSSAIIDMYGKCGN 280
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + + F ++ K+VV+W A+L+++ ++G +EA F M
Sbjct: 281 ILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEM 322
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 70/172 (40%), Gaps = 7/172 (4%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPAT 60
+TN K I ++L Y Q+ FD + ++ S + + Y +
Sbjct: 53 ITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGYFHNGLVLEV 112
Query: 61 WALFCYMHST-CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
LF M S + Y F ++ +CS G Q H +K G VK AL+
Sbjct: 113 LRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQCHGYALKSGLVFHQYVKNALIC 172
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
MYS+ + ++ + E+ DV ++N +++ L +G EA V M E
Sbjct: 173 MYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGYPSEALEVLDRMVDE 224
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 95 GKQVHA-LMIKGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GK +HA L+I + +V+ +L+++Y+K + + F + ++VV+W AL++ +
Sbjct: 44 GKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRKRNVVSWGALMAGY 103
Query: 153 LRHGLAKEAFGVFQAM 168
+GL E +F+ M
Sbjct: 104 FHNGLVLEVLRLFKTM 119
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D S NS + Y S L M L +TF VL AC+++ ERG +VH
Sbjct: 725 DEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVH 784
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A ++ +S+ VV +AL+DMY+K G + + F+ + +++ +WN+++S + RHG +
Sbjct: 785 ACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQ 844
Query: 160 EAFGVFQAMTR 170
+A +F M +
Sbjct: 845 KALKIFTRMKQ 855
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V ++FDE+ +L S + + YT++R +LF + S+ L + L AC
Sbjct: 192 VSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRAC 251
Query: 87 SALPAP--ERGKQVHALMIKGGTDSEPVVKTALMDMYSK-YGLLGESVEAFKEIEFKDVV 143
+ + G Q+HA + K S+ ++ LM MYS G + ++ F EI+F++ V
Sbjct: 252 QQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSV 311
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
TWN+++S + R G A AF +F M E VE
Sbjct: 312 TWNSIISVYCRRGDAVSAFKLFSVMQMEGVEL 343
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
ISI +AL Y VF + D S NS + + F + F M
Sbjct: 491 ISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKR 550
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + ++ L +CS+L G+Q+H K G D + V AL+ +Y++ + E
Sbjct: 551 NGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINE 610
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F ++ D V+WN+ + + LAK V QA+
Sbjct: 611 CQKVFFQMPEYDQVSWNSFIGA-----LAKYEASVLQAL 644
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH--STCLNLTAYTFTPVLGACS 87
H+VFDEI + + NS + Y R + + + LF M LNL +T +
Sbjct: 299 HRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTA 358
Query: 88 ALPAPERG----KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
A + G +Q+ + K G + V +AL++ +++YGL+ + FK++ ++ V
Sbjct: 359 ACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYDRNAV 418
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
T N L+ R +EA VF+ M
Sbjct: 419 TMNGLMVGLARQHQGEEAAKVFKEM 443
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF +L A S+ G Q+HAL++K + ++ AL+ Y K + + F +
Sbjct: 661 TFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRM 720
Query: 138 -EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E +D V+WN+++S +L G+ +A + M +
Sbjct: 721 SERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQ 754
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 91 APERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+G++VHA + + G D+ + AL++MY K + + F+ + KD V+WN+++
Sbjct: 470 GKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDTVSWNSMI 529
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S + +EA F M R
Sbjct: 530 SGLDHNERFEEAVSCFHTMKRN 551
>gi|255582620|ref|XP_002532091.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528238|gb|EEF30293.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 446
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD ++ D+ + N+ + Y ++ LF M + T VL AC+++
Sbjct: 284 RVFDNMAEKDIVTWNAMITGYAQNGASDEAMTLFNVMREAGITPNEITMVVVLSACASIG 343
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GK V + G + V +AL+DMY+K G L ++ F+ + K+ V+WNA++S
Sbjct: 344 ALDLGKWVEMYASQRGLQHDVYVASALVDMYAKCGSLDNALRVFENMPHKNEVSWNAMIS 403
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG A+EA +F M
Sbjct: 404 ALAFHGRAREALSLFSRM 421
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEI D+ S NS + YT+ LF M T +LGAC L
Sbjct: 183 KVFDEILERDIVSWNSMISGYTKMGFAREAVRLFMEMREQGFEPVEMTLVSILGACGDLG 242
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK V AL+ + +AL+DMY K G L + F + KD+VTWNA+++
Sbjct: 243 DLALGKWVEALIGDKKMELNSYTASALIDMYGKCGDLMSARRVFDNMAEKDIVTWNAMIT 302
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ ++G + EA +F M
Sbjct: 303 GYAQNGASDEAMTLFNVM 320
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 80/152 (52%), Gaps = 1/152 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTPV 82
K + Y +F ++ + + + N + T + RN+ L+ M S L +TF +
Sbjct: 74 KDFAYASLLFTQMPNPNDYAFNVMIRGLTTTWRNYSLAIQLYYQMKSLGLKPNNFTFPFL 133
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+C+ L A G+ H+L++K G +++ + +L+ MY+K L + + F EI +D+
Sbjct: 134 FISCANLVALHCGQIAHSLVLKMGFNNDSHINHSLITMYAKCSKLDSARKVFDEILERDI 193
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V+WN+++S + + G A+EA +F M + E
Sbjct: 194 VSWNSMISGYTKMGFAREAVRLFMEMREQGFE 225
>gi|224101423|ref|XP_002312273.1| predicted protein [Populus trichocarpa]
gi|222852093|gb|EEE89640.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 65/103 (63%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
+T++ F VL AC+ G +VH +IK G D++P ++T+L+ +Y + G L ++ +
Sbjct: 96 QITSFVFPSVLRACAGFGDMFIGAKVHGRIIKCGFDNDPFIETSLLGLYGELGCLTDARK 155
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
F +I +D+V+W++++SS++ G A EA +F+ + ERV+
Sbjct: 156 VFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKL 198
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ +F++I + NS + + +S N L M+ CL +T F + AC+ +
Sbjct: 457 YMIFNDIKQKSSVAWNSIISGFVQSGNSIEAIHLVDQMYLNCLKITDVVFLSAIQACADM 516
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E+GK +H +I G + + ++TAL DMY+K G L + F + K VV+W+A++
Sbjct: 517 VCLEKGKWLHHKLIMYGVEKDLYIETALTDMYAKCGDLRTAEGVFHSMSEKSVVSWSAMI 576
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
S + HG A F M
Sbjct: 577 SGYGMHGRIDAAITFFNQMVE 597
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 79/164 (48%), Gaps = 7/164 (4%)
Query: 14 TCISIADALPKRY-----VYT-HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
TC ++ ++L + Y +Y+ ++F +++ S S ++ Y RS F + +F M
Sbjct: 233 TCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIYCYNRSGWFKEAFEIFVKM 292
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGL 126
+ T VL +CS L GK +H +K G T + + L+++Y+ G
Sbjct: 293 LELKVEPNVITIMGVLKSCSGLSWLREGKLIHCYALKKGMTFQDDCLGPVLIELYAGCGK 352
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
LG + I ++VV+WN LLS R GL +EA +F M +
Sbjct: 353 LGYCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQK 396
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 1/141 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +V I ++ S N+ L R F LF M L L ++ + + AC
Sbjct: 355 YCEKVLLAIGERNVVSWNTLLSINARQGLFEEALVLFVQMQKRGLMLDFFSLSSAISACG 414
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + + G+Q+H IK E VK AL+ MYS+ G + F +I+ K V WN+
Sbjct: 415 NVGSLQLGRQIHGYAIKRCILGE-FVKNALIGMYSRCGFSDSAYMIFNDIKQKSSVAWNS 473
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S F++ G + EA + M
Sbjct: 474 IISGFVQSGNSIEAIHLVDQM 494
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD+I DL S +S + SY +F + + + L V ACS L
Sbjct: 155 KVFDDIPVRDLVSWSSIISSYVDKGEANEALEMFRLLVNERVKLDWVIMLSVTEACSKLG 214
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ K +H +++ D+ + +L++MYS L + F + K ++W +++
Sbjct: 215 ILKLAKSIHGYIVRRRVDTCEALDNSLIEMYSSCDDLYSAERIFVNMANKTFISWTSMIY 274
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R G KEAF +F M +VE
Sbjct: 275 CYNRSGWFKEAFEIFVKMLELKVE 298
>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 75/141 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F+E+ +L++ N+ + +Y R ++ W +F M + +TF L C
Sbjct: 127 YARKLFEEMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCG 186
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
AL + + GKQVH+ +I G + V AL+DMY+K ++ F E+ ++ VTWN+
Sbjct: 187 ALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNS 246
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S+ + G +A +F M
Sbjct: 247 IISAEAQFGHFNDALVLFLRM 267
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y ++F+ ++ + S NS + Y ++ LF M + ++ + +L
Sbjct: 328 RLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLS 387
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C +L ++G+++H +++ + E +++ L+DMY+K G + + + + + KD T
Sbjct: 388 SCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDRNT 447
Query: 145 --WNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
WN++L+ + GL KE+F F M +E+
Sbjct: 448 ALWNSILAGYANKGLKKESFNHFLEMLESDIEY 480
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST--CLNLTAYTFTPVLGACSA 88
+VFDE+ + + NS + + + +F LF M + + +TFT +L C+
Sbjct: 231 KVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCAN 290
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+G+Q+HA +I+ +V+T L+ MYS+ G L + E F + ++ +WN++
Sbjct: 291 QRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSM 350
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ + ++G +EA +F+ M
Sbjct: 351 IEGYQQNGETQEALRLFKQM 370
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 43/60 (71%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V++TAL+DMYSK G + ++ F + K++V+WNA++S + +HG +KEA +++ M ++
Sbjct: 493 VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKK 552
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA---FK 135
++ ++ C + +RGK +H MI G + + + T ++ +Y++ G L + A F+
Sbjct: 74 YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E+ +++ WN ++ ++ R EA+G+F M +
Sbjct: 134 EMPERNLTAWNTMILAYARVDDYMEAWGIFDRMLK 168
Score = 36.2 bits (82), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/126 (23%), Positives = 58/126 (46%), Gaps = 2/126 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD ++ ++ S N+ + Y++ L+ M + TF +L ACS
Sbjct: 514 VFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGL 573
Query: 92 PERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
E G ++ M + +++ T ++D+ + G L ++ E +++ + +V TW ALL
Sbjct: 574 VEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALL 633
Query: 150 SSFLRH 155
+ H
Sbjct: 634 GACRVH 639
>gi|62733531|gb|AAX95648.1| Tetratricopeptide repeat, putative [Oryza sativa Japonica Group]
Length = 888
Score = 79.0 bits (193), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 77/144 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+ V ++F ++ +++S NS + Y ++R F F M ++ + TF+ VL
Sbjct: 459 KMVEAEELFKKMPARNVASWNSIISGYAQNRQFIDALKSFHAMLASGQSPGEITFSSVLL 518
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC++L + E GK VHA +IK G V TAL DMY+K G L S F E+ ++ V
Sbjct: 519 ACASLCSLEMGKMVHAKIIKLGIKESIFVGTALSDMYAKSGDLDSSKRVFYEMPKRNDVA 578
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
W A++ +G A+E+ +F+ M
Sbjct: 579 WTAMIQGLAENGFAEESILLFEDM 602
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V DE+ + S + + + + N +L+ M + F+ VLGAC++L
Sbjct: 332 RRVLDEMPERNEVSWGTLVARHEQKGNAKEAVSLYSQMLADGCRPNISCFSSVLGACASL 391
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+++H +K + V +AL+DMY K L ++ F + K++V WN+L+
Sbjct: 392 QDLRSGRKIHNQTLKMACSNNVFVSSALIDMYCKCKQLPDAQMIFYSLPQKNIVCWNSLI 451
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S + + EA +F+ M V
Sbjct: 452 SGYSNNSKMVEAEELFKKMPARNV 475
Score = 37.4 bits (85), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 2/114 (1%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDM 120
+F M S ++ T V+ AC + + L +K D V+ +L+ +
Sbjct: 231 GVFHEMLSCGVSPNEITLVSVIKACIGAGEFDLAMSIVGLAMKSNLLDKNLGVRNSLITL 290
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
Y + G + F E+E +DVV+W ALL + G + A V M ER E
Sbjct: 291 YLRKGDADAARRMFDEMEVRDVVSWTALLDVYAELGDLEGARRVLDEMP-ERNE 343
>gi|414589997|tpg|DAA40568.1| TPA: hypothetical protein ZEAMMB73_314346 [Zea mays]
Length = 627
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 77/144 (53%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD++ + + + N+ L Y+RS N LF M + + T + AC+ L
Sbjct: 160 QELFDQMPNRNNVAWNTLLMGYSRSGNANQCLLLFNKMRAEGMACDGATLCILADACTEL 219
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
P G +H + ++ G + V +L+ +YSK+ LL ++V F+ +E + +V+WN+L+
Sbjct: 220 AHPSAGSAIHKVAVQSGWSAMAEVSNSLISLYSKFSLLDDAVRIFESMEVRTIVSWNSLI 279
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S+++ G ++A +F+ + V
Sbjct: 280 DSYMKLGCVEKATSLFRRVPETNV 303
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 49/97 (50%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF VL AC+ + G+ VH + G + V +LMDMY+K G + F
Sbjct: 340 FTFGSVLHACATAASLASGRMVHCRAFRSGFAAYLYVANSLMDMYAKCGDVEGGTNVFGA 399
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I KD+V+WN +L F +G A EA V+ +M V
Sbjct: 400 IVNKDLVSWNTMLFGFAINGWANEALVVYDSMKSHEV 436
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D + N+ L +Y R+ LF S A++ T L A +AL +
Sbjct: 34 MFDAMPRRDAVAWNAMLTAYVRAGQPRDALTLF----SRAPAPDAFSLTAALSAAAALRS 89
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
P G Q+HA +I+ G + V L+DMY+K ++ AF E+ ++ ++W +LL +
Sbjct: 90 PVAGAQLHARLIRAGLRALLPVGNTLVDMYAKCARADDAARAFGEMRERNALSWCSLLHA 149
Query: 152 FL 153
++
Sbjct: 150 YV 151
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 80/145 (55%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFD + + S ++Q+ Y+++ + +F M +T+ VL AC
Sbjct: 49 VSARKVFDRMPERTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRAC 108
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L +RG Q+ + K S +V++AL+D++SK G + ++ F +E +DVV+WN
Sbjct: 109 TGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWN 168
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++ ++ G + ++F +F++M +E
Sbjct: 169 AIIGAYAVQGFSGDSFRMFRSMMQE 193
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLN 73
S+ DA K H ++ + D+ S + + Y R N+ + LF + +
Sbjct: 239 SLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMK 298
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ + C+ + + G+Q+HAL +K + + AL+DMY+K G + ++ A
Sbjct: 299 IDDVILCSMFNICANISSLSVGRQIHALALKCKPTYDVAMGNALIDMYAKSGEIKDANRA 358
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F E+E K+V++W +L++ + HG EA +F+ M E ++
Sbjct: 359 FNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLK 399
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + D+ S N+ + +Y ++ +F M ++ +TF VL A
Sbjct: 155 LFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASD 214
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
R Q+H L+I+ G S + +L+D Y+K L + +K + KD+++ AL++
Sbjct: 215 VIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTG 274
Query: 152 FLR 154
+ R
Sbjct: 275 YAR 277
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C A + G +H ++ G S + T L+ YSK G + + F + + V
Sbjct: 4 LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTV 63
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
V+W+A +S + ++G ++A VF M R
Sbjct: 64 VSWSAQISGYSQNGCYQDALLVFLDMLR 91
>gi|297792411|ref|XP_002864090.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297309925|gb|EFH40349.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 534
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 56/97 (57%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
++F L AC+ L K VH+LMI GG + ++ +AL+D+Y+K G + S E F
Sbjct: 166 FSFASSLAACARLGDLHHAKWVHSLMIDGGIEFNAILSSALVDVYAKCGDIETSREVFCS 225
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ DV WNA+++ F HGLA EA VF M E V
Sbjct: 226 VKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHV 262
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 61/126 (48%), Gaps = 4/126 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF + D+S N+ + + +F M + ++ + TF +L ACS
Sbjct: 219 SREVFCSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTACSH 278
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E GK+ LM + + +P ++ A++D+ + G + E+ E + + + DVV W
Sbjct: 279 CGLLEEGKEYFGLMSRRFS-IQPKLEHYGAMVDLLGRAGQVKEAYELIESMPIEPDVVIW 337
Query: 146 NALLSS 151
+LLSS
Sbjct: 338 RSLLSS 343
>gi|449468588|ref|XP_004152003.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Cucumis sativus]
Length = 558
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 16 ISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHSTCLN 73
+S A P+ Y VF I D + N+ + S+ SR FP+ +LF + M S +
Sbjct: 28 LSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSH--SRFFPSH-SLFYFFSMRSNGIP 84
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L +TF VL ACS L + +H+L++K G DS+ V+ AL+ +Y G L +V+
Sbjct: 85 LDNFTFPFVLKACSRL---QINLHLHSLIVKYGLDSDIFVQNALICVYGYCGSLEMAVKV 141
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ +D V+W+ +++SFL +G A EA +F+ M E
Sbjct: 142 FDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSAL 89
+VFDE+S D S ++ + S+ + LF M + T V+ A S L
Sbjct: 140 KVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHL 199
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+ V A + + G + TAL+DM+S+ G + ES+ F+++ ++V+TW AL+
Sbjct: 200 GDLELGRWVRAFIGRLGLGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALI 259
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ HG + EA +F +M + V+
Sbjct: 260 NGLGVHGRSTEALAMFHSMRKSGVQ 284
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C I DA H +F+ I H D+ + + Y +S + +F M + +
Sbjct: 297 CGDIEDA--------HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVP 348
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++ + VL AC+ + E G+Q+H L IK G +SE V ALMDMY+K + S+E F
Sbjct: 349 NEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIF 408
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ + V+WN ++ + + G A++A VF M
Sbjct: 409 SSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEM 442
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + S N+ + Y +S ++F M + + T TF+ VL AC+
Sbjct: 406 EIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTS 465
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + Q+H+L+ K +++ +V +L+D Y+K G + ++++ F+ I DVV+WN+++S
Sbjct: 466 SIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIIS 525
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++ HG A A +F M + ++
Sbjct: 526 AYALHGRATNALELFDRMNKSDIK 549
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACSAL 89
VFD I D + + + Y S N +AL F M T + T L A L
Sbjct: 205 VFDGIVGKDAVTWTAMVSCY--SENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCL 262
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GK +H +K D+EP V AL+DMY+K G + ++ F+ I DV+ W+ L+
Sbjct: 263 SSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLI 322
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
S + + ++AF +F M R
Sbjct: 323 SRYAQSCQNEQAFEMFLRMMR 343
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 57/138 (41%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + + S + + Y F LF + + + T +L +
Sbjct: 103 RLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMD 162
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
AP +HA K G D V TAL+D YS G + + F I KD VTW A++S
Sbjct: 163 APGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVS 222
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + + + A F M
Sbjct: 223 CYSENDIPEYALNTFSKM 240
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESV 131
L +Y L C A G+ VHA +++ G + L++ Y+K G L +
Sbjct: 43 LDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLATAR 102
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + ++ V++ L+ + G +EA +F+ + RE
Sbjct: 103 RLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQRE 142
>gi|255549842|ref|XP_002515972.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544877|gb|EEF46392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V Q+FD + D+ S +S + Y ++ ++ +F M + T VL AC
Sbjct: 197 VLARQLFDLMPDRDVLSWSSLIDGYVKNGDYGDAMVVFDKMRVSGPKPNEVTMVSVLCAC 256
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVT 144
+ L A ++G+ +H +I V+ T+L+DMY+K G + E+ + F+ I E DV+
Sbjct: 257 AHLGALDKGRMMHHYVIDNKLPLTLVLCTSLVDMYAKCGAINEAFDVFRGIPAELSDVLL 316
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMT 169
WNA++ HGL KE+ +F+ M
Sbjct: 317 WNAMIGGLATHGLVKESLDLFKEMN 341
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 64/121 (52%), Gaps = 3/121 (2%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + Y++S+N + ++F M + T+ ++ A + L E G +HA +IK
Sbjct: 83 NTVIRGYSKSKNPNGSISVFIQMLKVGVFPDYLTYPFLVKASARLLKRELGFSIHAHIIK 142
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG---LAKEA 161
G +S+ + +L+ MY+ +G + + F + K++V+WN+++ + G LA++
Sbjct: 143 HGFESDRFISNSLVHMYASFGDISCARYVFDGMPVKNLVSWNSMVDGSAKCGNMVLARQL 202
Query: 162 F 162
F
Sbjct: 203 F 203
>gi|255570402|ref|XP_002526160.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534537|gb|EEF36236.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 762
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 76/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD I ++ N+ + Y ++ L M S + +T+T +L AC+ L
Sbjct: 241 KVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNMKSCGFHPDEFTYTSILSACACLE 300
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+Q+H+++IK S V AL+DMY+K G L ++ + F+ ++ +D V+WNA++
Sbjct: 301 HVEGGRQLHSIIIKNKFASNLFVGNALIDMYAKSGFLEDARKQFELMKSRDNVSWNAIIV 360
Query: 151 SFLRHGLAKEAFGVFQAM 168
+++ EAF +FQ M
Sbjct: 361 GYVQEEDEVEAFLMFQKM 378
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL AC+ L + G+++H+L+ + G D + +AL+DMY+K G + S++ F+++
Sbjct: 592 TFVSVLRACAVLSSIGDGREIHSLIFRTGLDLDESTCSALIDMYAKCGDVRSSMQVFEDM 651
Query: 138 EFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K DV++WN+++ F ++G A+ A +F M + V
Sbjct: 652 HSKNDVISWNSMIVGFAKNGYAENALRIFNEMKQAHV 688
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LFC M + T T VL A ++L + G VHA IK G DS V ++L++MY+
Sbjct: 172 LFCNMRKAGIKSTRSTLGSVLSAIASLTDLDFGLLVHAEAIKQGLDSNVYVGSSLINMYA 231
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K L + + F I+ ++VV WNA++ + ++G A E + M
Sbjct: 232 KCKELEAAKKVFDPIDERNVVLWNAMVGGYAQNGYAHEVIELLSNM 277
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + D S N+ + Y + + + +F MH + + +L AC+ +
Sbjct: 344 FELMKSRDNVSWNAIIVGYVQEEDEVEAFLMFQKMHLVGILPDEVSLASILSACANVEGF 403
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E+GK +H L +K G ++ ++L+DMY+K G +G + + K + VV+ NAL++ +
Sbjct: 404 EQGKPIHCLSVKSGLETSLYAGSSLIDMYAKCGDVGSAQKILKSMPEHSVVSINALIAGY 463
Query: 153 LRHGLAKEAFGVFQAMTRE 171
L +EA +F+ M E
Sbjct: 464 APVNL-EEAIILFEKMQAE 481
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 51/94 (54%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF VL C+ L + E G+ VH ++K G + AL+DMY+K + + F
Sbjct: 19 FTFAIVLSGCARLDSVEFGRLVHCNVVKLGFEFSSFCVGALIDMYAKNNRMSDCRRVFDG 78
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
D V+W +L++ +++ GL +EA VF+ M +
Sbjct: 79 GVSLDTVSWTSLIAGYVKAGLPEEALEVFEQMKK 112
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 3/142 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++ + + S+N+ + Y N LF M + LN + TF +L C
Sbjct: 441 AQKILKSMPEHSVVSINALIAGYA-PVNLEEAIILFEKMQAEGLNPSEITFASLLDGCGG 499
Query: 89 LPAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWN 146
G Q+H L++K G + + +L+ MY K ++ F E K + W
Sbjct: 500 PEQLILGIQIHCLILKRGLQYDDDFLGVSLLGMYVKSLRKTDARILFSEFSNPKSTILWT 559
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++S ++ + EA +Q M
Sbjct: 560 AMISGLAQNNCSDEALQFYQEM 581
>gi|242040141|ref|XP_002467465.1| hypothetical protein SORBIDRAFT_01g028590 [Sorghum bicolor]
gi|241921319|gb|EER94463.1| hypothetical protein SORBIDRAFT_01g028590 [Sorghum bicolor]
Length = 529
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 2/161 (1%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
T + A A + Q+FD++ + S N+ + Y ++F ++ L
Sbjct: 263 TTVVCACAEDGQLTIARQLFDQMPERNAFSWNALIEGYVCHGQPMDALSMFQHLMEEGLQ 322
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T L AC+A+ + + G+Q+H ++++ G D ++ ++++DMYS+ L ++E
Sbjct: 323 PDQITLGCCLSACAAMRSLKLGQQIHGMLLRCGFDQSVMIISSIIDMYSECSFLSGAIEV 382
Query: 134 FKEI--EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
F E K+ V WN +LS+ RHG ++A G+F M ER
Sbjct: 383 FSLTGRERKNAVLWNGMLSALCRHGHGQDAIGLFVQMIHER 423
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 73/177 (41%), Gaps = 33/177 (18%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST--CLNLTAYTFTPVLGACSA 88
+VF + H +L S N+ + + R L+ + + L + +TF +L A +
Sbjct: 146 EVFASMPHRELVSYNAVMLALGRGGEARGAVELYSELRNMYPSLGYSHHTFLALLAAGAE 205
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV------ 142
L E +Q H ++ G S+ + ++L+D+Y K + ++ F E+ KDV
Sbjct: 206 LMDRELARQFHGHLMVLGFLSDVNIASSLLDVYRKCHCVDDARNLFDEMHIKDVHMWTTV 265
Query: 143 -------------------------VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+WNAL+ ++ HG +A +FQ + E ++
Sbjct: 266 VCACAEDGQLTIARQLFDQMPERNAFSWNALIEGYVCHGQPMDALSMFQHLMEEGLQ 322
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 31 QVFDEI------SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
++FD I H DL S + +Y + + L+ MHS + TF VL
Sbjct: 674 EIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLN 733
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ L +G+ +HA +++ G ++ V +++ MY K G E+ F++ + KD+
Sbjct: 734 ACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEASIVFEKTKHKDISL 793
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
W AL++S+ RHG ++A +F+ + ++ +E
Sbjct: 794 WTALIASYARHGHGEQALWIFRRLRQDGIEL 824
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 10/167 (5%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
I + N AK C ++ +A +VFD I++ NS + +Y + ++ LF
Sbjct: 456 ISLVNMYAK-CGTVGEA--------RKVFDRINNRSRILWNSMITAY-QEKDPHEALHLF 505
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M ++ TF VL AC E G+ +H ++ G ++ V TAL +MY+K
Sbjct: 506 REMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKC 565
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G LGE+ F + F+DVV+WN +++++++ + A + AM E
Sbjct: 566 GSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLE 612
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D+ S N+ + +Y + R+ +L M + TFT +L ACS
Sbjct: 574 VFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACSDPNR 633
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI------EFKDVVTW 145
G+Q+H+ + + +++ V+ T L+ MY+ G L + E F I +D+ W
Sbjct: 634 LVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLW 693
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++++++ +HG ++A +++ M +VE
Sbjct: 694 TSMITAYEQHGEYRKALELYEQMHSRQVE 722
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F + D+ S + +Y++ F + LF M + TF +L C A
Sbjct: 66 QTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPS 125
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES-VEAFKEIEFKDVVTWNALL 149
E+G+Q+HAL+++ +S VV +L+ MYS+ +S ++ F ++ +DVV+W ++
Sbjct: 126 LLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMI 185
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
++ + G + +F+ M E
Sbjct: 186 GAYSQDGKFSLSIQLFREMLLE 207
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 2/143 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F + D+ S + +Y++ F + LF M + TF +L C A
Sbjct: 168 QTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPS 227
Query: 91 APERGKQVHALMIKGGTDS--EPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E+G+Q+HAL+++ +S + V ++MY K G L +V+ F ++ +DVV+W +
Sbjct: 228 LLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVM 287
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ + G + +F+ M E
Sbjct: 288 IGAYSQDGKFSLSLQLFREMLLE 310
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F + D+ S + +Y++ F + LF M + TF +L C A
Sbjct: 271 QTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPS 330
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+G+Q+HAL+++ +S VV +L+ MYS+ +S F + +D V+W+ ++
Sbjct: 331 LLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIM 390
Query: 151 SFLRH-GLAKEAFGVFQAMTRERV 173
+ R ++A ++++M E V
Sbjct: 391 ACSREDSHCRDALPLYRSMLHEGV 414
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ VL AC +L + GK VHA +I+ G + + +V +L++MY+K G +GE+ + F I
Sbjct: 421 LSMVLEACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRIN 479
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + WN++++++ EA +F+ M E V
Sbjct: 480 NRSRILWNSMITAYQEKD-PHEALHLFREMQPEGV 513
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L AC+ L A E GK + + + + V+ ++MY K G L +V+ F ++ +D
Sbjct: 16 LLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRD 75
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
VV+W ++ ++ + G + +F+ M E
Sbjct: 76 VVSWTVMIGAYSQDGKFSLSLQLFREMLLE 105
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF++ H D+S + + SY R + +F + + L+ TF +L ACS +
Sbjct: 782 VFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHVGL 841
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLS 150
E G + A M + G + + L+D+ ++ G L + E + + + ALL+
Sbjct: 842 IEEGCEFFASMAELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTALLA 901
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG + A V + +
Sbjct: 902 ACRVHGDVERARRVAEKL 919
>gi|357445603|ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124360447|gb|ABN08457.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355482127|gb|AES63330.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 558
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 81/156 (51%), Gaps = 15/156 (9%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTR-SRNFPATWALFCY-------MHSTCLNLTAYTF 79
Y H++FD + + S F +T R F + FC+ MH + + +TF
Sbjct: 65 YAHKLFDTMPNC------SNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFTF 118
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
+ VL AC +PA GKQVHA +++ G +V+TAL+DMY+K G + ++ + F I
Sbjct: 119 SLVLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVFDGIVD 178
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+DVV W A++ + + G +A +F M ER F
Sbjct: 179 RDVVAWTAMICGYAKAGRMVDARFLFDNMG-ERNSF 213
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 17/149 (11%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD I D+ + + + Y ++ LF M ++T+T ++ +
Sbjct: 171 DVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNMGER----NSFTWTTMVAGYANYG 226
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN---- 146
+ +++ +M G D V A++ Y K G + E+ F EI V WN
Sbjct: 227 DMKAAMELYDVM--NGKDE--VTWVAMIAGYGKLGNVSEARRIFDEI----TVPWNPSTC 278
Query: 147 -ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
ALL+ + ++G A+EA +++ M R +++
Sbjct: 279 AALLACYAQNGHAREAIEMYEKMRRAKIK 307
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + + DL + ++ + ++ LF M L TF VL ACS
Sbjct: 368 FNIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQQEGLKPNQVTFVGVLNACSTSGLI 427
Query: 93 ERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
E G + +M + G + P T ++D+ + G L ++ KE D TW +LL+
Sbjct: 428 EEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLA 487
Query: 151 SFLRHG 156
+ +G
Sbjct: 488 ACRVYG 493
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 75/138 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF I+ D+ S ++ + Y++ + +M + + VL C ++
Sbjct: 383 VFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMAL 442
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GKQVHA ++ G D E +V +A++ MYSK G + E+ + F ++ D+++W A+++
Sbjct: 443 LEQGKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMING 502
Query: 152 FLRHGLAKEAFGVFQAMT 169
+ HG ++EA +F+ ++
Sbjct: 503 YAEHGYSQEAINLFEKIS 520
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F+++ D+ S + + +Y + F M + ++ YTF V+ +C+
Sbjct: 278 YVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCA 337
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A + G+Q+H +++ G + V +++ +YSK GLL + F I KD+++W+
Sbjct: 338 NLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWST 397
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++S + + G AKEAF M RE
Sbjct: 398 IISVYSQGGYAKEAFDYLSWMRRE 421
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSALP 90
+FD+++H D S + + Y + + LF M + + L AC+
Sbjct: 79 MFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALKACALGV 138
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ +H +K G V +AL+DMY K G + + F+++ ++VV+W A+++
Sbjct: 139 NICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIA 198
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ G E F M R +V +
Sbjct: 199 GLVHAGYNMEGLLYFSEMWRSKVGY 223
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M + + ++TF L A + GK +H IK G D V L MY+K
Sbjct: 213 FSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNK 272
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G + F+++ DVV+W L+S++++ G + A F+ M + V
Sbjct: 273 CGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYV 322
>gi|297739678|emb|CBI29860.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY---MHSTCLNLTAYTFTPVLG 84
Y ++F +I ++ S NS + ++S+ P+ + + + N +T VL
Sbjct: 111 YARKLFSQIQRPNIFSWNSMIRGCSQSQT-PSKEPVILFRKMVRRGYPNPNTFTMAFVLK 169
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS + A E G+QVHA ++K G S P V+TAL++ Y+K + + + F EI +++V
Sbjct: 170 ACSIVSALEEGQQVHANVLKSGFGSSPFVETALVNFYAKCEDIVLASKVFDEITDRNLVA 229
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
W+ ++S + R GL EA G+F+ M + V
Sbjct: 230 WSTMISGYARIGLVNEALGLFRDMQKAGV 258
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 74/148 (50%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFDEI+ +L + ++ + Y R LF M + T V+ AC
Sbjct: 213 VLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPDEVTMVSVISAC 272
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+A A + GK VHA + K +++ + TAL++MY+K G + + E F + KD W+
Sbjct: 273 AASGALDTGKWVHAYINKQLIETDLELSTALVNMYAKCGCIERAKEVFDAMPVKDTKAWS 332
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ +GLA++A F M +V+
Sbjct: 333 SMIVGLAINGLAEDALEEFFRMEEAKVK 360
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 81/160 (50%), Gaps = 6/160 (3%)
Query: 18 IADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
++++L YVY Q+F + ++ S + ++ F +F M
Sbjct: 58 LSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGN 117
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
A T + VL A + L K VH ++GG + V+TAL+DMYSK+G +G +
Sbjct: 118 FKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVAR 177
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F+ + ++VVTWNA++S + HG ++EA +F M R+
Sbjct: 178 QLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRK 217
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACSA 88
H+VF E+S D+++ L ++ R++ F M L L + +L +CS
Sbjct: 278 HRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSH 337
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A ++G++VHAL IK + V +A++DMY+ G L ++ F + KDVV WNA+
Sbjct: 338 SGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWNAM 397
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
++ +G +A +F M
Sbjct: 398 IAGNGMNGYGTDAIDLFLQM 417
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 61/122 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F+ +S ++ + N+ + Y+ LF M L + YT ++ A ++
Sbjct: 178 QLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVG 237
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G +H +I+ G +++ +KTALMD+Y + + ++ F E+ KDV W +L+
Sbjct: 238 CLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLT 297
Query: 151 SF 152
F
Sbjct: 298 GF 299
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+HA +I G + +LM+ Y GLL ++ + F +K+VV+W L+S ++
Sbjct: 41 QQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYKNVVSWTILISGLAKN 100
Query: 156 GLAKEAFGVFQAM 168
EA VF+ M
Sbjct: 101 DCFVEAIDVFREM 113
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 77/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+EI D N+ + SY LF L T +T + VL A S L
Sbjct: 997 RVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILL 1056
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G Q+H+L++K G +S+ +V ++L++MY+K+GL+ +++ F +I +D+++WN ++
Sbjct: 1057 PVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIM 1116
Query: 151 SFLRHGLAKEAFGVFQAM 168
+G +A +F+ +
Sbjct: 1117 GLAYNGRVSKALEIFKEL 1134
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF + D+ S NS ++S +S F M S + +T + V+ CS
Sbjct: 893 YAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCS 952
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E+G+Q+ AL I+ G S +V +A +D++SK L +SV F+EI D V NA
Sbjct: 953 NLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNA 1012
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++SS+ HG + A +F RE +
Sbjct: 1013 MISSYAWHGFGENALQLFVLTLRENL 1038
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 74/155 (47%), Gaps = 8/155 (5%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C I DA Q+FD + L S NS + ++++ LFC M+ L
Sbjct: 383 NCGRIDDA--------RQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLR 434
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ ++ V+ AC+++ + E G+Q+ A G + + ++ T+L+D Y K GL+ +
Sbjct: 435 MDKFSLAGVISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKL 494
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + D V WN++L + +G EA VF M
Sbjct: 495 FDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQM 529
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
VFDE+ D+ S N+ + Y F + F M + + +T++ +L S +
Sbjct: 796 RDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLL---SFV 852
Query: 90 PAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ RGKQ+HA MI+ G D S VV +L+ MY K+G++ + F +E D+++WN+L
Sbjct: 853 SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSL 912
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ S + G A F M
Sbjct: 913 IWSCGKSGYQNLALRQFVLM 932
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + Y + LF M + TF VL ACS L ++G QVHA + K
Sbjct: 274 NSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYK 333
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G ++ ++ +AL+DMYSK ++ + F +++ D + N++++ + G +A +
Sbjct: 334 VGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQI 393
Query: 165 FQAM 168
F M
Sbjct: 394 FDTM 397
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGES 130
++L ++ LG+C+ + RG+ +H L +K G S + L+ MYS+ + E+
Sbjct: 2 VDLDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREA 61
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F+E+ ++ +WN ++ +L+ G ++ +F +M
Sbjct: 62 QQLFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSM 99
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 42/73 (57%)
Query: 101 LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKE 160
++IK G ++ + +D+YS+ G +S+ F++I K++++WN L +F+R G +
Sbjct: 735 MLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWNIFLKAFVRFGELER 794
Query: 161 AFGVFQAMTRERV 173
A VF M + V
Sbjct: 795 ARDVFDEMPKRDV 807
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 31/129 (24%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ V+GAC+ L A + GKQ+HA ++ + + V+ ++L+++Y K G + +
Sbjct: 174 FVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKCGDIDSANHVLNL 233
Query: 137 IEFKD-------------------------------VVTWNALLSSFLRHGLAKEAFGVF 165
++ D VV WN+++S ++ + A EA +F
Sbjct: 234 MKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYVANNEALEALELF 293
Query: 166 QAMTRERVE 174
M R+ V+
Sbjct: 294 NNMRRKGVQ 302
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD + D NS L Y + + +F M S + T TF VL AC
Sbjct: 490 HGRKLFDRMMKSDEVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSACD 549
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
E G++ M K P ++ + ++D+Y++ GLL +++ +++ K D
Sbjct: 550 HCGLVEEGRKWFYAM-KLDYHINPGIEHYSCMVDLYARAGLLEDAMNLIEQMPLKADTSM 608
Query: 145 WNALLSSFLRHG 156
W+++L + HG
Sbjct: 609 WSSVLRGCVAHG 620
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 33/63 (52%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + + + ++G L + + F E+ +DVV+WN ++S ++ GL +AF F
Sbjct: 773 DKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSE 832
Query: 168 MTR 170
M +
Sbjct: 833 MQK 835
>gi|255540655|ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550507|gb|EEF51994.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSALPAPERGKQVH 99
L S QL S+ LF +M S L+L Y F VL +CSA+ P+ G VH
Sbjct: 27 LLSFTKQLTSHVNRGLHHDALTLFYHMQTSLALSLDPYVFPLVLKSCSAVLCPQLGTSVH 86
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A ++K G S P V +AL+DMY K + + + F EI ++VV WNA++S + +
Sbjct: 87 AHIVKMGFLSNPFVASALVDMYGKCACIFSARKLFDEIPQRNVVVWNAMISLYTHSNRVR 146
Query: 160 EAFGVFQAMTRE 171
+A +F AM E
Sbjct: 147 DALDMFDAMEIE 158
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 80/167 (47%), Gaps = 8/167 (4%)
Query: 16 ISIADALPKRYVYTHQVFDEISHGD-------LSSLNSQLFSYTRSRNFP-ATWALFCYM 67
+ + +A+ Y ++++V D + D +S+ N+ ++ + ++ A + M
Sbjct: 129 VVVWNAMISLYTHSNRVRDALDMFDAMEIEPNVSTFNALIYGLSGVKDGSIKAIAFYWKM 188
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
L T +L AC + A +++H I+ D P + + L+D Y + G L
Sbjct: 189 RQLGLKPNLITLLALLPACVGIAALNLIREIHGYSIRNDIDRHPQLGSGLLDAYGRCGCL 248
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F ++ +DVV W++L+S++ HG AK A +F+ M +V+
Sbjct: 249 INASNVFCGMKERDVVAWSSLISAYALHGEAKNALEIFRQMELAKVQ 295
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + +L S N+ + +Y +S N + LF + + A+TF +L S++
Sbjct: 306 KAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIG 365
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A +G+Q+H+ ++K G S + AL+ MYS+ G + + + F E+ +V++W ++++
Sbjct: 366 AIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMIT 425
Query: 151 SFLRHGLAKEAFGVFQAM 168
F +HG A A F M
Sbjct: 426 GFAKHGFATRALETFHKM 443
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY---GLLGESVEA 133
+T + V+ AC+ + G+Q H L++K G D + V +L+DMY+K G + ++ +
Sbjct: 146 FTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKV 205
Query: 134 FKEIEFKDVVTWNALLSSFLRH-GLAKEAFGVFQAMTRERVE 174
F + +V++W A+++ +++ G +EA +F M + +V+
Sbjct: 206 FDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVK 247
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + ++ S + + Y +S LF M + +TF+ VL AC+ L
Sbjct: 204 KVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANL 263
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+QV+AL++K S V +L+ MYS+ G + + +AF + K++V++N ++
Sbjct: 264 SDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIV 323
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+++ + ++EAF +F +
Sbjct: 324 NAYAKSLNSEEAFELFNEI 342
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSK-YGLLGESVEAF 134
Y FT V ACS GK + ++K G +S+ V AL+DM+ K G L + + F
Sbjct: 43 YCFTGVFRACSNKENISLGKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVF 102
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ ++VVTW +++ F + G +++A +F M
Sbjct: 103 DRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMV 137
>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
Length = 650
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ DL NS + + +S + LF M + T T VL AC+ +
Sbjct: 235 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMV 294
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVHA ++K + + ++ AL+DMY K G L ++ F + +DV++W+ ++S
Sbjct: 295 MLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQRDVISWSTMIS 352
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++G + EA VF M E V
Sbjct: 353 GLAQNGKSAEALRVFDLMKSEGV 375
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
AYTF+ VLGAC P +HA +K G DS+ V+++L+D Y K G L F
Sbjct: 181 NAYTFSSVLGACGT---PGVLAALHASTVKVGLDSDVFVRSSLIDAYMKLGDLDGGRRVF 237
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E+ +D+V WN++++ F + G A +F M
Sbjct: 238 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRM 271
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR-HGLAKEAFG 163
GG V +L+ MY+K+GLL +++ F + ++VVTW ++++ G +EA
Sbjct: 109 GGAGGGIFVSNSLVSMYAKFGLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEALR 168
Query: 164 VFQAMTRERV 173
AM R+ V
Sbjct: 169 FLVAMWRDGV 178
>gi|255542634|ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548341|gb|EEF49832.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 736
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VF+ D S+ L +T++ F M + +
Sbjct: 137 CGSLEDA--------RRVFESAVELDEVSMTVILVGFTQNGFEEEAIEFFVKMVNIGTEV 188
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ VLGAC + GKQ+H+L+IK S P V L++MYSK G L ES++ F
Sbjct: 189 DPNMVSAVLGACGVDTSLGLGKQIHSLVIKRSLGSNPFVGNGLINMYSKCGELQESIKVF 248
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ V+WN+++++F RHG A +++ M +E
Sbjct: 249 NGLTCRNSVSWNSMIAAFARHGDGFRALRLYEEMIQE 285
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFDE+ ++ + + + +++ + + LF M + T+ L ACS L
Sbjct: 43 RQVFDEMLERNVITWTAIISGLSQNEMYEDSLGLFVQMRCGLIEPNFLTYLSSLTACSGL 102
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+G+Q+H L+ K G S +++ALMD+YSK G L ++ F+ D V+ +L
Sbjct: 103 QALEKGRQIHGLVWKLGIQSNLCIESALMDLYSKCGSLEDARRVFESAVELDEVSMTVIL 162
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
F ++G +EA F M
Sbjct: 163 VGFTQNGFEEEAIEFFVKMV 182
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
MY K G+ ++V+ F ++ +D V+WN ++S FLR+G VF M V
Sbjct: 1 MYFKCGVFSDAVKVFDDMPTRDTVSWNTMVSGFLRNGDLDTGRQVFDEMLERNV 54
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRN 56
++IR N C+ +++AL Y + VF +I D+ S N+ + Y+++
Sbjct: 779 NYIRKNNMA--LCLPVSNALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSL 836
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
LF M T +L AC +L A E G+ +H +++ G SE V A
Sbjct: 837 PNEALKLFAEMQKES-RPDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANA 895
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L+DMY K G L + F I KD++TW ++S HGL EA FQ M
Sbjct: 896 LIDMYVKCGSLVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKM 947
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 8/157 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++ DA+ Q F+++ + S S + +Y R + LF M S ++
Sbjct: 702 CGNLNDAI--------QAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKGVSP 753
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
Y+ T VL AC+ + ++G+ VH + K V ALMDMY+K G + E+ F
Sbjct: 754 DVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAYLVF 813
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+I KD+V+WN ++ + ++ L EA +F M +E
Sbjct: 814 SQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKE 850
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 74/144 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++FDE+ D+ S NS + + + F M + + T + AC+ +
Sbjct: 608 HKLFDELGDRDVVSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANV 667
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H +K E + L+DMYSK G L ++++AF+++ K VV+W +L+
Sbjct: 668 GSLSLGRALHGQGVKACFSREVMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLI 727
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++++R GL +A +F M + V
Sbjct: 728 AAYVREGLYDDAIRLFYEMESKGV 751
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 1/144 (0%)
Query: 31 QVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD I S + N + Y + ++ + LF M + +YTF+ +L + L
Sbjct: 507 RIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATL 566
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K++H + K G S V +L+ Y K G + + + F E+ +DVV+WN+++
Sbjct: 567 GRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMI 626
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S + +G + A F M RV
Sbjct: 627 SGCVMNGFSHSALEFFVQMLILRV 650
Score = 44.7 bits (104), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
L+L AY+ +L C+ + GK VH+++ G E V+ L+ MY G L E
Sbjct: 449 LDLNAYS--SILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGR 506
Query: 132 EAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F I V WN ++S + + G +E+ +F+ M +
Sbjct: 507 RIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQK 546
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF + D S N+ + + + F F MHS L Y+F L AC+ L
Sbjct: 106 NVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSALSACAGLT 165
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+HAL+ K + + +AL+DMYSK G++ + AF + +++V+WN+L++
Sbjct: 166 DLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNIVSWNSLIT 225
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G A +A VF M VE
Sbjct: 226 CYEQNGPAGKALEVFVMMMDNGVE 249
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + ++ S N+ + YT++ LF + + T YTF +L AC+ L
Sbjct: 341 MFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLAD 400
Query: 92 PERGKQVHALMIK------GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
+ G+Q H ++K G +S+ V +L+DMY K G++ + F+ + +DVV+W
Sbjct: 401 LKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDVVSW 460
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
NA++ + ++G A +F+ M
Sbjct: 461 NAMIVGYAQNGYGTNALEIFRKM 483
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 36/179 (20%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGAC 86
+ FD ++ ++ S NS + Y +N PA AL F M + T V+ AC
Sbjct: 205 AQRAFDGMAVRNIVSWNSLITCY--EQNGPAGKALEVFVMMMDNGVEPDEITLASVVSAC 262
Query: 87 SALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGE---------------- 129
++ A G Q+HA ++K ++ V+ AL+DMY+K + E
Sbjct: 263 ASWSAIREGLQIHARVVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSE 322
Query: 130 -----------SVEA----FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
SV+A F + K+VV+WNAL++ + ++G +EA +F + RE +
Sbjct: 323 TSMVCGYARAASVKAARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESI 381
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 50/95 (52%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L + F +L +C + +++HA +IK SE ++ L+D Y K G ++ +
Sbjct: 17 LDSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKV 76
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F + ++ ++NA+LS + G EAF VF++M
Sbjct: 77 FDRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSM 111
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 77/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E+ + + N+ + Y + + LF +M + T T++ VL A ++L
Sbjct: 394 KLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLA 453
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G Q+H+L IK + + VV +L+DMY+K G + ++ F ++ +D V+WNA++
Sbjct: 454 ALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMIC 513
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HG++ EA +F M
Sbjct: 514 GYSMHGMSMEALNLFDMM 531
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 78/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E+ DL + + Y +S LF M T + +TF VL AC++
Sbjct: 293 RLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSV 352
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GKQ+H+ ++K G +S V A+MD+Y+K G + S++ F+E+ ++ VTWN ++
Sbjct: 353 SLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIV 412
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++ G + A +F M ++
Sbjct: 413 GYVQLGDGERAMNLFTHMLEHDMQ 436
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD+I D+ S + Y + + + LF M +T + L +C L
Sbjct: 192 HVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLE 251
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK VH +KG D + V AL+++Y+K G + ++ F+E+ D++ W+ +++
Sbjct: 252 AFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIA 311
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + +KEA +F M + V
Sbjct: 312 RYAQSDRSKEALDLFLRMRQTSV 334
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 61/138 (44%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ + S + Y+R F + + + FT +L ++
Sbjct: 91 KLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMD 150
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+HA + K G ++ V TAL+D YS G + + F +I KD+V+W +++
Sbjct: 151 LAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVA 210
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + +E+ +F M
Sbjct: 211 CYAENCFYEESLQLFNQM 228
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 56/126 (44%), Gaps = 4/126 (3%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD+++ D S N+ + Y+ LF M T TF VL ACS
Sbjct: 497 FDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLL 556
Query: 93 ERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
+G Q H + D +P ++ T ++ + + G E+++ EI ++ V+ W ALL
Sbjct: 557 YKG-QAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALL 615
Query: 150 SSFLRH 155
+ + H
Sbjct: 616 GACVIH 621
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEIS D+ S N+ + Y + NF L+ M T + T V+ AC+
Sbjct: 152 KLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSG 211
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G+Q+H+ + G S + L+D+YSK G + + F+ + KDV++WN L+
Sbjct: 212 SIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAKKDVISWNTLIG 271
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
L KEA +FQ M R
Sbjct: 272 GHTHMNLYKEALLLFQEMLR 291
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 75/146 (51%), Gaps = 4/146 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F ++ D+ S N+ + +T + LF M + + T VL AC+ L A
Sbjct: 254 LFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGA 313
Query: 92 PERGKQVHALM---IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ G+ +H + +KG T++ ++ T+L+DMY+K G + + + F + + + +WNA+
Sbjct: 314 IDIGRWIHVYINKRLKGVTNASSLL-TSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAM 372
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F HG A AF +F M + ++
Sbjct: 373 IFGFAMHGKANAAFDLFSKMRKNGID 398
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 31/178 (17%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +F+ I +L N+ + + + L+ M S L +Y+F +L +C+
Sbjct: 17 YAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCA 76
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA-------------- 133
A G+Q+H ++K G D + V T+L+ MY++ G L ++ +
Sbjct: 77 KSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTA 136
Query: 134 -----------------FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F EI KDVV+WNA++S ++ KEA +++ M + V+
Sbjct: 137 LITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVK 194
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + LSS N+ +F + A + LF M ++ TF +L ACS
Sbjct: 356 QVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSG 415
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
+ G+ + M + + + M D+ GL E+ E + + + D V W +L
Sbjct: 416 MLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSL 475
Query: 149 LSSFLRH 155
L + H
Sbjct: 476 LKACKMH 482
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 22 LPKRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
L K V + Q +FDE+ D N+ + Y+R+ W LF M + +A T
Sbjct: 96 LKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLV 155
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L C +G+ VH + K G + + VK AL+ YSK LG + F+E++ K
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK 215
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
V+WN ++ ++ + GL +EA VF+ M + VE
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSALP 90
+F+++ L S NS + +S + +F M T L A T +L CS L
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK++H ++ ++E V TAL+DMY+K G ++ FK I+ TWN+++S
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ GL A + M RE+
Sbjct: 524 GYSLSGLQHRALSCYLEM-REK 544
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +++ + L S + Y + F C+ + A +L C
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G +H IK G ++ +V L+ MYSK+ + + F++++ +++WN
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWN 417
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+++S ++ G A AF VF M
Sbjct: 418 SVISGCVQSGRASTAFEVFHQM 439
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 28 YTHQVFDEISHGDLSSLNSQLF-SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
Y H + HG++SS +F RS P + + ++ +T + ++
Sbjct: 15 YFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKL------- 67
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ +QV + K G D VKT+L+++Y K G + + F E+ +D V WN
Sbjct: 68 -------QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWN 120
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
AL+ + R+G +A+ +F M ++
Sbjct: 121 ALICGYSRNGYECDAWKLFIVMLQQ 145
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 1/147 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF EI D+ S + + + + + + +F M + N YTF +L +CS
Sbjct: 244 YACKVFGEIPERDVVSWTALITGFV-AEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCS 302
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+L + GKQVHA ++K D V TAL+DMY+K L ++ F + +D+ W
Sbjct: 303 SLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTV 362
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + + G ++A F M RE V+
Sbjct: 363 IVAGYAQDGQGEKAVKCFIQMQREGVK 389
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + DL + + Y + F M + +T L CS +
Sbjct: 348 IFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIAT 407
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H++ IK G + V +AL+DMY+K G + ++ F + +D V+WN ++
Sbjct: 408 LDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICG 467
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ +HG +A F+AM E
Sbjct: 468 YSQHGQGGKALKAFEAMLDE 487
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF +L C++ GK +H +IK G + + + +L+++Y+K G + + F E
Sbjct: 192 YTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 251
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
I +DVV+W AL++ F+ G +F M E
Sbjct: 252 IPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAE 285
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QV +E+ D+ N +L S LF M T + L + F ++ A ++L
Sbjct: 45 QVLEEMPIQDVQQWNQKLSSANSPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLG 104
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ +HA + K G +S+ ++ A + MY K + + FK + +++ + N LLS
Sbjct: 105 DNHYGESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLS 164
Query: 151 SF 152
F
Sbjct: 165 GF 166
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 1/148 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGAC 86
Y QVFD+I H +L + N+ + +Y S N + +F M H + +TF ++ A
Sbjct: 87 YAQQVFDQIPHPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAA 146
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
S L GK H ++IK S+ + +L+ Y+K G LG F I +DVV+WN
Sbjct: 147 SELEELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWN 206
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++++F++ G +EA +FQ M + V+
Sbjct: 207 SMITAFVQGGCPEEALELFQEMETQNVK 234
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA----YTFT 80
Y +FD + + D+++ N+ + +Y + LF H L+ TA T
Sbjct: 318 EYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELF---HELQLSKTAKPDEVTLV 374
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
L AC+ L A + G +H + K G + T+L+DMY K G L +++ F +E K
Sbjct: 375 STLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERK 434
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
DV W+A+++ HG K+A +F M ++V+
Sbjct: 435 DVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVK 468
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 68/144 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF I D+ S NS + ++ + LF M + + T VL AC+
Sbjct: 191 YRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKK 250
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+ VH+ + + + A++DMY+K G + ++ F ++ KD+V+W +L
Sbjct: 251 SDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTML 310
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ + G A G+F AM + +
Sbjct: 311 VGYAKIGEYDAAQGIFDAMPNQDI 334
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D S NS + + + F + F MH L Y+F L AC+ L
Sbjct: 102 RLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLM 161
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G QVHAL+ K ++ + +AL+DMYSK G + + E F + +++VTWN+L++
Sbjct: 162 DLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLIT 221
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G A EA VF M +E
Sbjct: 222 CYEQNGPASEALEVFVRMMDSGLE 245
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 5/147 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACS 87
+VF + +L + NS + Y +N PA+ AL F M + L T V+ AC+
Sbjct: 202 EEVFSGMIERNLVTWNSLITCY--EQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACA 259
Query: 88 ALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+L A + G Q+HA ++K + V+ AL+DMY+K + E+ F + ++VV+
Sbjct: 260 SLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSET 319
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
+++S + R K A +F MT+ V
Sbjct: 320 SMVSGYARAASVKAARFMFSKMTQRNV 346
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +++ ++ S N+ + YT++ LF + + T YTF +L
Sbjct: 337 MFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL-------- 388
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
S+ V +L+DMY K G + + F++++ +D V+WNA++
Sbjct: 389 ----------------KSDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVG 432
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++G EA +F+ M
Sbjct: 433 YAQNGYGAEALQIFRKM 449
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F +L +C + + VHA ++ E ++ L+D+Y K L ++ + F +
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ TWN+L+S + G EA +F +M
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSM 107
>gi|296085345|emb|CBI29077.3| unnamed protein product [Vitis vinifera]
Length = 671
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ VFD + D+ S N+ + Y ALF M + + T T +L AC+
Sbjct: 250 HARMVFDRMVCRDVISWNTMINGYAICGKPNEALALFDQMRAVGVKPTEATVVSLLSACA 309
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A ++G +H + + +V TAL+DMY+K G + + + F +E KDV+ WN
Sbjct: 310 HLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYAKCGKISLATQVFNAMESKDVLAWNT 369
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ HG KEA +F+ M VE
Sbjct: 370 IIAGMAIHGNVKEAQQLFKEMKEAGVE 396
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
P Y +F + + S NS + + + S+ L+ M + L T+ V
Sbjct: 113 PTFLAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFV 172
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+ AC+ G VH ++K G + + + ++L+ +Y+ LG + + F +DV
Sbjct: 173 IKACNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDV 232
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMT 169
V+WNA++ +++H A VF M
Sbjct: 233 VSWNAMIDGYVKHVEMGHARMVFDRMV 259
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ +S + S N+ + SY + + +LF M + T T++ +L AC+ L
Sbjct: 304 ELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLA 363
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G QVH L K + V AL+DMY+K G + ++ F ++ +D V+WNA++
Sbjct: 364 ALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNAIIC 423
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HGL EA +F M + +
Sbjct: 424 GYSMHGLGVEAIKMFNLMKETKCK 447
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 67/137 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ + S + + Y +S F + LF +H L + FT VL ++
Sbjct: 2 VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ VH ++K G S + TAL+D YS G + + E F EI KD+V+W +++S
Sbjct: 62 AELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGMIAS 121
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + EA F M
Sbjct: 122 YAENDCFSEALEFFSQM 138
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 10/161 (6%)
Query: 10 FPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ C+S+A +VFDEIS D+ S + SY + F F M
Sbjct: 91 YSVSGCVSMA----------REVFDEISSKDMVSWTGMIASYAENDCFSEALEFFSQMRV 140
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+TF VL AC L + GK VH ++K + + V L+++Y++ G +
Sbjct: 141 AGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGDNDD 200
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ AF ++ DV+ W+ ++S F + G +++A +F M R
Sbjct: 201 AWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRR 241
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F ++ D+ + + + +S +FC M + +TF+ VL A + +
Sbjct: 203 RAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIE 262
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + K +H +K G ++ V ALM Y+K G + +S+E F+ + ++ V+WN ++
Sbjct: 263 SLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRNDVSWNTIIV 322
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
S+++ G + A +F M R +V+
Sbjct: 323 SYVQLGDGERALSLFSNMLRYQVQ 346
Score = 39.3 bits (90), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA R++ FD + D S N+ + Y+ +F M T
Sbjct: 397 CGSIKDA---RFM-----FDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKP 448
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVE 132
TF VL ACS + GKQ M K EP ++ T ++ + + G L ++V+
Sbjct: 449 DELTFVGVLSACSNTGRLDEGKQYFTSM-KQDYGIEPCMEHYTCMVWLMGRSGNLDQAVK 507
Query: 133 AFKEIEFK-DVVTWNALLSSFLRH 155
++I F+ V+ W ALL + + H
Sbjct: 508 FIEDIPFEPSVMIWRALLGACVIH 531
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD I+H D+ + N+ + Y ++ ALF M + T VL AC+A+
Sbjct: 274 RVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVG 333
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G ++ A G V TAL+DMYSK G L ++V+ F ++ K+ TWNAL+
Sbjct: 334 ALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALIC 393
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+G EA F+ M E
Sbjct: 394 GLAFNGRGHEAIRQFEVMRNE 414
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 6/156 (3%)
Query: 17 SIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLT 75
++ D L R +VFD I D+ S N+ + +Y R+ +F M +
Sbjct: 163 NLGDPLAAR-----RVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFRDMIDEGAVAPN 217
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
T VL AC G+ + + + +V +AL+ MY K G + E+ F
Sbjct: 218 EVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFD 277
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
I KDVV WNA+++ + ++G++KEA +F +M +E
Sbjct: 278 GIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQE 313
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Query: 47 QLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG 106
+ F+ TR R LF M L AYT +L A + P P + HAL+ + G
Sbjct: 90 RFFASTRPRT---ALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFARSAHALLCRLG 146
Query: 107 TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
+ +L+ MYS G + F I +DVV+WNA++ ++ R G+A + +F+
Sbjct: 147 LQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAGMAADVARMFR 206
Query: 167 AMTRE 171
M E
Sbjct: 207 DMIDE 211
>gi|255550516|ref|XP_002516308.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544538|gb|EEF46055.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 599
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 88/170 (51%), Gaps = 5/170 (2%)
Query: 4 FIRMTNFPAKTCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
F RM + S+ DA + R ++F E+ + S S + + ++ +
Sbjct: 157 FSRMFERDVVSWTSMVDAYARASRMDDAFRLFMEMPVKNTVSWTSLIAGFAKNGHSYKAL 216
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK--GGTDS-EPVVKTALM 118
LF M + +A+TF VLGAC+ L ERGKQ+H +I+ G TD V AL+
Sbjct: 217 ELFLQMQEENVLPSAFTFVTVLGACADLALIERGKQIHGHIIRSSGRTDLFNMYVYNALI 276
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
DMY K G + S F+ + KD+V+WN+L++ ++G A+E+ +F+ M
Sbjct: 277 DMYCKCGDMKSSKSLFEGMSEKDIVSWNSLITGLAQNGHAEESLDLFRKM 326
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 9/139 (6%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD+ ++ S N+ + Y R F LF M NL +Y + + G+ L
Sbjct: 62 QKVFDDNPIKNIHSWNTMIGGYARVGLFDNARDLFDKMPEP--NLISYN-SLISGSLDLL 118
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+QVH I G + +V AL+D Y K G S F + +DVV+W +++
Sbjct: 119 ------RQVHGAAILIGLEFNVIVYNALIDSYGKCGQHNTSYCIFSRMFERDVVSWTSMV 172
Query: 150 SSFLRHGLAKEAFGVFQAM 168
++ R +AF +F M
Sbjct: 173 DAYARASRMDDAFRLFMEM 191
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 38/74 (51%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G +H+ +IK P +MD+YSK+ ++ + + F + K++ +WN ++ + R
Sbjct: 26 GLTLHSFLIKTALICSPFFSNRVMDLYSKFNVIDSAQKVFDDNPIKNIHSWNTMIGGYAR 85
Query: 155 HGLAKEAFGVFQAM 168
GL A +F M
Sbjct: 86 VGLFDNARDLFDKM 99
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 16/152 (10%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
PK V + +S D S + QL+ RS N A TF
Sbjct: 694 PKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQA---------------TFVSA 738
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKD 141
L AC+ + + + G + H+L+ G DS+ + +AL+DMY+K G + S++ FKE+ KD
Sbjct: 739 LRACAVVSSIKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKD 798
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V++WN+++ F ++G A++A VF M + V
Sbjct: 799 VISWNSMIVGFAKNGYAEDALRVFDEMKQSHV 830
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 74/139 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD ++ ++ N+ L Y ++ LF M S +T++ +L AC+ L
Sbjct: 383 KVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLK 442
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+H+++IK S V AL+DMY+K G L ++ + F+ I +D V+WN ++
Sbjct: 443 YLDLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIV 502
Query: 151 SFLRHGLAKEAFGVFQAMT 169
+++ EAF +F+ M
Sbjct: 503 GYVQEEDEVEAFHLFRRMN 521
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%), Gaps = 2/144 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGAC 86
Y + F ++ D+ + NS L +++ + FP F + ++ + +TF VL +C
Sbjct: 112 YAERAFKQLEDKDILAWNSILSMHSK-QGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSC 170
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L + G+QVH ++K G +S + AL+ MY+K L ++ F D V+W
Sbjct: 171 ARLEMVKCGRQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWT 230
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
+++ +++ GL +EA VFQ M +
Sbjct: 231 SMIGGYIKVGLPEEAVKVFQEMEK 254
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F+ I + D S N + Y + + + LF M+ + + +L AC+++
Sbjct: 484 QQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVR 543
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E+GKQVH L +K G +++ ++L+DMY+K G + + + + + VV+ NAL++
Sbjct: 544 GLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIA 603
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + L ++A +F+ M E +
Sbjct: 604 GYAQINL-EQAVNLFRDMLVEGI 625
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 20/145 (13%)
Query: 40 DLSSLN--SQLFSYTRSRNFPATWAL-----------------FCYMHSTCLNLTAYTFT 80
DL L+ S LFS +RN A W L F M + T T
Sbjct: 273 DLGRLDNASDLFSRMPNRNVVA-WNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLG 331
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL A ++L A + G VHA +K G S V ++L+ MY+K G + + + F + +
Sbjct: 332 SVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQ 391
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVF 165
+VV WNA+L ++++G A E +F
Sbjct: 392 NVVLWNAMLGGYVQNGYANEVMELF 416
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
K +HA +K G S+ V+ ++D+Y+K + + AFK++E KD++ WN++LS +
Sbjct: 79 KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQ 138
Query: 156 G 156
G
Sbjct: 139 G 139
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++ + + S+N+ + Y + N LF M +N T TF +L AC
Sbjct: 584 HKILACMPERSVVSMNALIAGYAQI-NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQ 642
Query: 90 PAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNA 147
G+Q+H+L++K G + + +L+ MY ++ F E K V W A
Sbjct: 643 QKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTA 702
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S ++ + A +++ M
Sbjct: 703 MISGLSQNDCSVVALQLYKEM 723
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
S IRM TC SI A +VFD + D+ S + Y + N +
Sbjct: 299 SLIRMYT----TCGSIEGA--------RRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFG 346
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + T+ ++ AC+ +++H+ + G ++ +V TAL+ MY+
Sbjct: 347 LFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVHMYA 406
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G + ++ + F + +DVV+W+A++ +++ +G EAF F M R +E
Sbjct: 407 KCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIE 458
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + D+S+ N + Y +S ++ + LF M L +F +L C
Sbjct: 214 QVFDGLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPE 273
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK VHA + G + V T+L+ MY+ G + + F ++ +DVV+W ++
Sbjct: 274 ALAWGKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIE 333
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ +G ++AFG+F M E ++
Sbjct: 334 GYAENGNIEDAFGLFATMQEEGIQ 357
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 74/140 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+FD + + + + N+ + Y + + +ALF M L + TF VL ACS+
Sbjct: 113 QIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPA 172
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK+VHA ++ G S+ + TAL+ MY K G + ++ + F + +DV T+N ++
Sbjct: 173 GLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVG 232
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ + G ++AF +F M +
Sbjct: 233 GYAKSGDWEKAFELFYRMQQ 252
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +I DA QVFD + D+ S ++ + +Y + + F M + +
Sbjct: 408 CGAIKDA--------RQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEP 459
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T+ +L AC L A + G +++ IK S + AL+ M +K+G + + F
Sbjct: 460 DGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIF 519
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ +DV+TWNA++ + HG A+EA +F M +ER
Sbjct: 520 DTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKER 557
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
++ + T+ + C+ L GKQV +I+GG L+ +YS G + E+ +
Sbjct: 54 HIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQ 113
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F +E K VVTWNAL++ + + G KEAF +F+ M E +E
Sbjct: 114 IFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLE 155
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 64/153 (41%), Gaps = 4/153 (2%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+++ P + I +A +FD + D+ + N+ + Y+ N LF
Sbjct: 493 VSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDR 552
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKY 124
M + TF VL ACS + G++ +++ G P VK ++D+ +
Sbjct: 553 MLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLE-GRGIVPTVKLYGCMVDLLGRA 611
Query: 125 GLLGESVEAFKEIEFKDVVT-WNALLSSFLRHG 156
G L E+ K + K + W++LL + HG
Sbjct: 612 GELDEAELLIKSMPVKPTSSIWSSLLVACRIHG 644
>gi|357131803|ref|XP_003567523.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 577
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 72/140 (51%)
Query: 35 EISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPER 94
++S D S NS + + + F M + +TF +L A + +
Sbjct: 285 DVSCQDQVSFNSVISGLSCLGRGNEAFQHFVQMRRQGTDTDVFTFASMLKAIGSSSSLLE 344
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G QVHAL+ K G DS+ V+ L+ MY++ G +GES + F +E D+V+WN+LLS +
Sbjct: 345 GSQVHALVSKTGYDSDVNVQNGLISMYARRGAIGESRDVFAFVETPDLVSWNSLLSGYAH 404
Query: 155 HGLAKEAFGVFQAMTRERVE 174
HG KE VF+ M R V+
Sbjct: 405 HGYGKEVVEVFEQMRRLNVQ 424
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ + AL Y H +V E ++++ + L +R + M
Sbjct: 159 VVVGTALVDMYAKCHDVSAARRVLGETEDRNVATFTALLGGLAAARRSHDAMLVVGEMER 218
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + T++ +L A + + G+Q H ++K G ++ V +AL+ MYSK G L +
Sbjct: 219 SGVAPNMMTYSSLLSAFTGPDDLDHGRQAHCAVLKKGLENNRYVLSALVTMYSKCGSLED 278
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ +D V++N+++S G EAF F M R+ +
Sbjct: 279 FRRVQVDVSCQDQVSFNSVISGLSCLGRGNEAFQHFVQMRRQGTD 323
>gi|115474729|ref|NP_001060961.1| Os08g0138600 [Oryza sativa Japonica Group]
gi|38636769|dbj|BAD03012.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113622930|dbj|BAF22875.1| Os08g0138600 [Oryza sativa Japonica Group]
Length = 690
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + + NS L SY+ L+ M +++ +TF+ +L S L
Sbjct: 273 RVFDGVPQKSVVAWNSMLASYSLHGCSEEALDLYHSMCEGGVDIDQFTFSTMLRVFSRLG 332
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E KQ HA +I+ G + V TAL+D+Y K+GL+ ++ F+ + +++++WNAL++
Sbjct: 333 LLEHAKQAHAGLIQTGLPLDIVGNTALVDLYCKWGLMEDARNVFERMPIRNLISWNALIA 392
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ HG+ ++A +F+ + E +
Sbjct: 393 GYGYHGMGQKAIEMFEELIAEGI 415
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + G+Q+H + K G + + AL+DMY+K G L E+ F + K VV WN++
Sbjct: 230 LGSARAGQQLHCCVAKTGMYEDQYLSCALIDMYNKCGKLDEARRVFDGVPQKSVVAWNSM 289
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
L+S+ HG ++EA ++ +M V+
Sbjct: 290 LASYSLHGCSEEALDLYHSMCEGGVDI 316
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF +S D+ S N+ + S + + + M + L T +L CS L
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H + K G +S + AL++MYSK G L ++ FK ++ KDVVTW AL+S
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 151 SFLRHGLAKEAFGVFQAM 168
+F +G K+A FQ M
Sbjct: 598 AFGMYGEGKKALKAFQDM 615
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+S+ D S NS + Y + + ++ T + +T + VL AC +L A
Sbjct: 178 VFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMA 237
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G VH ++ K G + ++ L+ MY K+ L E+ F ++ KD VTWN ++
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + G + + +F M
Sbjct: 298 YAQLGRHEASVKLFMDM 314
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R +VF +++ D + N+ + Y + A+ LF M + + T +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP-DMLSITSTI 329
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC + GK VH +I G + + V L+DMY+K G L + E F + KD V
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRER 172
TWN+L++ + + G KE F+ M ER
Sbjct: 390 TWNSLINGYTQSGYYKEGLESFKMMKMER 418
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + + T + F + M L A+TF V+ +C+ + E G VH ++
Sbjct: 90 NSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAME 149
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G +S+ + AL+DMYS++ L + F+E+ +D V+WN+L+S + +G ++A +
Sbjct: 150 MGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDM 209
Query: 165 FQ 166
+
Sbjct: 210 YH 211
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD D + NS + YT+S + F M + TF +L S L
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQL 435
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+G+ +H +IK G ++E ++ +L+D+Y+K G + + ++ F + D+++WN ++
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+S + F + M E
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTE 517
>gi|302803175|ref|XP_002983341.1| hypothetical protein SELMODRAFT_117959 [Selaginella moellendorffii]
gi|300149026|gb|EFJ15683.1| hypothetical protein SELMODRAFT_117959 [Selaginella moellendorffii]
Length = 421
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 70/146 (47%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V + +VFD + D+ S NS + Y + A LF M + TF L AC
Sbjct: 141 VDSRRVFDGMRRHDVVSWNSLISGYADNDQGEAALELFVPMELEGCAHDSRTFLASLKAC 200
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ A + G+ +H + G D + V+ T+L+D Y K G + ++ + F I KD+V WN
Sbjct: 201 GCVGALDIGRTLHGKIRDLGLDGDVVIATSLVDFYGKCGSMVDAEQVFSSIVTKDIVAWN 260
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRER 172
ALL+ + R G + F F M R
Sbjct: 261 ALLTGYSRQGDTEALFQAFDRMMTSR 286
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 74/159 (46%), Gaps = 10/159 (6%)
Query: 14 TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S+ DA ++FD + + S N+ + Y ++ + LF M C
Sbjct: 35 NCGSLPDA--------RRLFDRLPARSIVSWNAMMLGYAENKEAESALELFSLMEKRC-Q 85
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVE 132
T+ TF L AC+ L E G+++ + K G + V +L+DMY+K G + +S
Sbjct: 86 PTSRTFVAALKACAVLAEAEEGRELEGKVAKIYGFQWDLFVANSLVDMYAKCGSMVDSRR 145
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + DVV+WN+L+S + + + A +F M E
Sbjct: 146 VFDGMRRHDVVSWNSLISGYADNDQGEAALELFVPMELE 184
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H D + V+ L+D+Y+ G L ++ F + + +V+WNA++ + +
Sbjct: 10 IHQQAANKSCDLDVVLGNTLLDLYANCGSLPDARRLFDRLPARSIVSWNAMMLGYAENKE 69
Query: 158 AKEAFGVFQAMTR 170
A+ A +F M +
Sbjct: 70 AESALELFSLMEK 82
>gi|242088973|ref|XP_002440319.1| hypothetical protein SORBIDRAFT_09g029650 [Sorghum bicolor]
gi|241945604|gb|EES18749.1| hypothetical protein SORBIDRAFT_09g029650 [Sorghum bicolor]
Length = 671
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 17 SIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--H 68
S+A++L K Y + +F E + D+ S ++ + Y + ++ALF M H
Sbjct: 303 SVANSLVKLYARRGRLSAADAIFRENAVKDVVSWSTIISGYAQEGLVEESFALFSEMRHH 362
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
S+C +T + C++ + G+Q+HAL + G + +V++AL++MY K G +
Sbjct: 363 SSCPRPNEFTLASLFSVCASAASLYAGRQLHALAVAAGLEHHAMVRSALVNMYGKSGSMT 422
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ F DV++W A++ HG +KEAF +F+ M R
Sbjct: 423 DANVIFSSRTRDDVISWTAMIVGHAEHGHSKEAFQLFEEMCR 464
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 52/92 (56%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF+ V+ AC + G+Q+HA + G V +L+ +Y++ G L + F+E
Sbjct: 268 YTFSAVIAACPNIERAYLGEQLHAQAARRGLSHTRSVANSLVKLYARRGRLSAADAIFRE 327
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KDVV+W+ ++S + + GL +E+F +F M
Sbjct: 328 NAVKDVVSWSTIISGYAQEGLVEESFALFSEM 359
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QV DE ++ S + + S R F M ++ ++ ++ L AC+
Sbjct: 117 QVLDETPCKNVVSWTTLVASLARGGRRHDALRRFAEMRASGVDCDSHACAAALTACAGAG 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
RG++VHAL K G D+ P V AL +Y++ G + ++ A + +DV W L++
Sbjct: 177 LRARGREVHALCAKLGLDAVPFVANALAALYARCGDVDRALAAVGRMGTRDVAAWTTLIA 236
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
S+++ G A+EA F M R
Sbjct: 237 SYVQTGRAEEAIEAFVRMLR 256
Score = 38.9 bits (89), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TAL D Y+K G L +++ E K+VV+W L++S R G +A F M V+
Sbjct: 100 TALADAYAKAGSLELALQVLDETPCKNVVSWTTLVASLARGGRRHDALRRFAEMRASGVD 159
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF +S D+ S N+ + S + + + M + L T +L CS L
Sbjct: 478 KVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLA 537
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+GK++H + K G +S + AL++MYSK G L ++ FK ++ KDVVTW AL+S
Sbjct: 538 VRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALIS 597
Query: 151 SFLRHGLAKEAFGVFQAM 168
+F +G K+A FQ M
Sbjct: 598 AFGMYGEGKKALKAFQDM 615
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+S+ D S NS + Y + + ++ T + +T + VL AC +L A
Sbjct: 178 VFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMA 237
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G VH ++ K G + ++ L+ MY K+ L E+ F ++ KD VTWN ++
Sbjct: 238 VKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICG 297
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + G + + +F M
Sbjct: 298 YAQLGRHEASVKLFMDM 314
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R +VF +++ D + N+ + Y + A+ LF M + + T +
Sbjct: 271 ERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMIDGFVP-DMLSITSTI 329
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC + GK VH +I G + + V L+DMY+K G L + E F + KD V
Sbjct: 330 RACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSV 389
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRER 172
TWN+L++ + + G KE F+ M ER
Sbjct: 390 TWNSLINGYTQSGYYKEGLESFKMMKMER 418
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + + T + F + M L A+TF V+ +C+ + E G VH ++
Sbjct: 90 NSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAME 149
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G +S+ + AL+DMYS++ L + F+E+ +D V+WN+L+S + +G ++A +
Sbjct: 150 MGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDM 209
Query: 165 FQ 166
+
Sbjct: 210 YH 211
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD D + NS + YT+S + F M + TF +L S L
Sbjct: 377 QEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKME-RKPDSVTFVLLLSIFSQL 435
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+G+ +H +IK G ++E ++ +L+D+Y+K G + + ++ F + D+++WN ++
Sbjct: 436 ADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTVI 495
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+S + F + M E
Sbjct: 496 ASSVHFDDCTVGFQMINEMRTE 517
Score = 35.4 bits (80), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 1/80 (1%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLR 154
+ VH+L+I G + L+ Y++ SV F+ I +V WN+++ +
Sbjct: 39 RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISPTNNVYLWNSIIRALTH 98
Query: 155 HGLAKEAFGVFQAMTRERVE 174
+GL +A G + M ++++
Sbjct: 99 NGLFTQALGYYTEMREKKLQ 118
>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Brachypodium distachyon]
Length = 642
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 2/140 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ DL NS + + +S + LF M + T T VL AC+ +
Sbjct: 228 VFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACTGMVM 287
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+QVHA ++K D + ++ AL+DMY K G L ++ F + +DV++W+ ++S
Sbjct: 288 LEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWSTMISG 345
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
++G + EA VF M E
Sbjct: 346 LAQNGRSVEALKVFDLMKAE 365
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+YTF+ VLGAC P +HA +IK G DS+ V+++L+D Y K G L F
Sbjct: 173 NSYTFSSVLGACGT---PGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLDSGRGVF 229
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E+ D+V WN++++ F + G A +F M
Sbjct: 230 DEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRM 263
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH-GLAKEAFGVFQAMTRE 171
V +L+ MY+K+G+L +++E F + ++VV+W ++++ G KEA M R+
Sbjct: 109 VSNSLVSMYAKFGMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMRRD 168
Query: 172 RV 173
V
Sbjct: 169 GV 170
>gi|357508205|ref|XP_003624391.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499406|gb|AES80609.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 709
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I + ++L Y+ ++ FDEI H D+ S + A+ M
Sbjct: 242 ICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQMADGCLQWGEPRMALAVIAKMKK 301
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ +T L AC+ L + E GKQ H L IK G+D + V AL+DMY+K G +
Sbjct: 302 MGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVDNALLDMYAKCGCMDS 361
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ + VV+W ++ + ++G EA +F M VE
Sbjct: 362 AWTVFRSTNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETSVE 406
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTR--SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
Q+F+ D + N+ + Y S P W YM+ + +TF L +
Sbjct: 163 QIFETSPIRDTVTWNTMMGGYLEFSSEQIPVFWR---YMNREGVKPDEFTFASALTGLAT 219
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + + G QVHA +++ G + V +L+DMY K L E +AF EI KDV +W +
Sbjct: 220 ISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMYLKNQKLEEGFKAFDEIPHKDVCSWTQM 279
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
L+ G + A V M + V+
Sbjct: 280 ADGCLQWGEPRMALAVIAKMKKMGVK 305
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 4/146 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSAL 89
Q+FDE+ ++ S +S + + +LF MH + +TF L ACS
Sbjct: 61 QLFDEMPERNVVSWSSVMTGCVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLS 120
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ Q+++L+++ G + + A + + G L E+++ F+ +D VTWN ++
Sbjct: 121 ENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMM 180
Query: 150 SSFLRHGLAKEAFGVF-QAMTRERVE 174
+L + E VF + M RE V+
Sbjct: 181 GGYLE--FSSEQIPVFWRYMNREGVK 204
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 45/78 (57%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+G +HA IKG ++ L++MY K L +++ F E+ ++VV+W+++++ +
Sbjct: 23 KGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCV 82
Query: 154 RHGLAKEAFGVFQAMTRE 171
+G A +A +F M RE
Sbjct: 83 HNGGASDALSLFSCMHRE 100
>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
Length = 601
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 74/142 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD I + DL+S N+ + + + + +L+ M L +T+T VL ACS L A
Sbjct: 185 VFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSKLGA 244
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK++H + G ++ TAL++MY+K G E+ F + K+V TW +L+S+
Sbjct: 245 LTEGKEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWTSLMSA 304
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ + G ++ +Q M E V
Sbjct: 305 YSQPGQSQYRLEAYQRMNCEGV 326
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 8/145 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++ +L S S + +YT + + L+ M S + Y + L C P
Sbjct: 88 VFDKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVC---PT 144
Query: 92 PERGKQVHALMIKGGTDSE--PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K G PV AL+ MY ++G + + F I +KD+ ++N ++
Sbjct: 145 IREGEAIH---VKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMI 201
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F ++ +A ++ M +E
Sbjct: 202 AVFAKYDDGSKAISLYIEMEGRNLE 226
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 72 LNLTAYTFTPVLGACSALPAP--ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L T+ VL +C+ L E GK++H I G ++ VV+ +L+ MY+K G
Sbjct: 25 LQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKF 84
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F ++E K+++++ +++ ++ EA+ +++ M E +
Sbjct: 85 AAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGI 128
>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H +F+ ++ +L S N + Y + +LF M + A T +L AC
Sbjct: 258 YIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACG 317
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A G+++H + KG +++ AL+DMY+K G L E+ + F ++ +DVV+W +
Sbjct: 318 DLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTS 377
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S++ R G +A +F M
Sbjct: 378 MMSAYGRSGQGYDAVALFAKM 398
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD ++ N + SY + + ++F M S N YTF VL ACS L
Sbjct: 93 IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN 152
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G QVH ++K G D+ + AL+ MY K G L E+ + ++ ++DVV+WN++++
Sbjct: 153 LRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAG 212
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + G +A + + M
Sbjct: 213 YAQSGQFDDALEICKEM 229
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD++ D+ S S + +Y RS ALF M + N + F VL ACS
Sbjct: 362 DVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG 421
Query: 91 APERGKQVHALMIKGGTDSEPVVK-----TALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
++G+ +M T+ +V ++D++ + G + E+ K++ + +
Sbjct: 422 LLDQGRHYFRMM----TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERV 477
Query: 145 WNALLSSFLRH 155
W ALLS+ H
Sbjct: 478 WGALLSACRVH 488
>gi|357117671|ref|XP_003560587.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Brachypodium distachyon]
Length = 602
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 77/141 (54%), Gaps = 2/141 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ + S ++ L Y ++ + LF M + +Y+ VL AC+ L
Sbjct: 297 RVFDEMQVRNAVSWSALLGGYCQNAEYEKVLVLFRQMDKEYDD--SYSLGTVLRACAGLS 354
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GK++H ++ G + VV++AL+D+Y+K G + + F+ ++ +TWNA++
Sbjct: 355 SVKPGKEIHCRFLRNGGWRDVVVESALVDLYAKCGAVDYACRVFEASSVRNTITWNAMIG 414
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F ++G A+ A +F M RE
Sbjct: 415 GFAQNGHAERAINLFNQMVRE 435
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 81/158 (51%), Gaps = 7/158 (4%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRS----RNFPATWALFCYMHSTCLNLTAY 77
LP+ Y + FD++ H D+ + +S L ++ R+ R + ++ N A+
Sbjct: 83 LPRHLPYALRAFDDLPHRDVVAHSSILAAFLRAGLPRRALQSLRSMLAGADGVFPN--AH 140
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+ + AC+ L G VH +++ G + +V +AL+DMY G++ +AF+E+
Sbjct: 141 ALSAAVKACAVLRDRNVGACVHGVILVRGYADDDIVLSALVDMYGHTASPGDARKAFEEM 200
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM-TRERVE 174
D + + +L+S+F+R+ +EA F+ M TR VE
Sbjct: 201 CTPDGICYTSLISAFVRNDWFEEAVRWFRTMVTRNGVE 238
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 54/94 (57%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF ++ A L +G + HA ++ G +V+++ +DMY+K G++ E+ F E+
Sbjct: 243 TFGSMMTALGNLRRARQGSEAHAQVVTRGLCGSVIVESSTLDMYAKCGMMLEARRVFDEM 302
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ V+W+ALL + ++ ++ +F+ M +E
Sbjct: 303 QVRNAVSWSALLGGYCQNAEYEKVLVLFRQMDKE 336
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL-LGESVEAFKEIEFKDVVTWNAL 148
P+P G +HA + G ++ V AL+ Y + L ++ AF ++ +DVV +++
Sbjct: 49 PSPRLGYCLHARAARAGLLADRYVANALLAFYVRLPRHLPYALRAFDDLPHRDVVAHSSI 108
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
L++FLR GL + A ++M
Sbjct: 109 LAAFLRAGLPRRALQSLRSM 128
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F E++ +L + N+ + Y RS + + +LF M S +TFT + AC+ L
Sbjct: 267 RCFGELTEKNLITWNTLIAGYERS-DSSESLSLFFQMGSEGYKPNCFTFTSITAACANLA 325
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+QVH +++ G D + +L+DMY+K G + +S + F ++ +D+V+W ++
Sbjct: 326 VLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMI 385
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG KEA +F M + ++
Sbjct: 386 GYGAHGYGKEAVKLFDEMVQSGIQ 409
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+EI D+ + + + +T ++ W +F M + + A+T + VL AC +
Sbjct: 64 NLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMK 123
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMY-SKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G H+L K G D V+ AL+DMY + + +++ F +I K V+W L+
Sbjct: 124 ALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLI 183
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F G F+ M E V
Sbjct: 184 AGFTHRGDGYSGLLAFRQMLLEDV 207
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 12 AKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
A +C ++ DAL VF++I S + + +T + + F M
Sbjct: 155 AASCATMDDAL--------SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLED 206
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ +++F+ AC+++ + GKQ+HA + K G + V +++DMY + L ++
Sbjct: 207 VGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAK 266
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ K+++TWN L++ + R + E+ +F M E
Sbjct: 267 RCFGELTEKNLITWNTLIAGYERSD-SSESLSLFFQMGSE 305
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V T L+ Y GL E+ F EI +DVVTW A++ F +A+ +F M R
Sbjct: 44 VWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103
Query: 172 RVE 174
V+
Sbjct: 104 EVQ 106
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
N+T T P C+ L AP RGK++H ++ DS+ V +AL+DMY+K G L S
Sbjct: 493 NITLMTLLP---GCAMLAAPARGKEIHGYAVRHALDSDVAVGSALVDMYAKCGCLALSRA 549
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
F + ++V+TWN L+ ++ HGL EA +F M
Sbjct: 550 VFDRLPRRNVITWNVLIMAYGMHGLGDEAIALFDRMV 586
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 3/151 (1%)
Query: 24 KRYVYTHQVFDEISHGD--LSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFT 80
+R VFD + G+ L N+ + Y ++ LF M + + + T
Sbjct: 319 ERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIA 378
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL +C+ + VH ++K G P V+ ALMD+Y++ G + + F IE +
Sbjct: 379 GVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPR 438
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
DVV+WN L++ + G ++AF + + M ++
Sbjct: 439 DVVSWNTLITGCVVQGHIRDAFQLVREMQQQ 469
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 74 LTAYTFTPVLGACSALPAPER-GKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGES 130
LT++T VL ACS L R G++ HA +K G E AL+ MY++ GL+ ++
Sbjct: 158 LTSFTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDA 217
Query: 131 VEAFKEIEFKDV-----VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F + DV VTWN ++S ++ G EA V M V
Sbjct: 218 QTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGV 265
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 3/97 (3%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKE 136
TF L ACS L G+++HA ++K + V +AL+DMY+ + +G + F
Sbjct: 271 TFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDM 330
Query: 137 IEF--KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + + WNA++ + + GL ++A +F M E
Sbjct: 331 VPAGERQLGLWNAMICGYAQAGLDEDALELFARMETE 367
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + D S NS + + + F + F MH L Y+F L AC+ L
Sbjct: 102 RLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLM 161
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G QVHAL+ K ++ + +AL+DMYSK G + + E F + +++VTWN+L++
Sbjct: 162 DLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLIT 221
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G A EA VF M +E
Sbjct: 222 CYEQNGPASEALEVFVRMMDSGLE 245
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +++ ++ S N+ + YT++ LF + + T YTF +L AC+ L
Sbjct: 337 MFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLLSACANLAD 396
Query: 92 PERGKQVHALMIK------GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
G+Q H ++K G +S+ V +L+DMY K G + + F++++ +D V+W
Sbjct: 397 LLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSW 456
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
NA++ + ++G EA +F+ M
Sbjct: 457 NAIIVGYAQNGYGAEALQIFRKM 479
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACSA 88
+VF + +L + NS + Y +N PA+ AL F M + L T V+ AC++
Sbjct: 203 EVFSGMIERNLVTWNSLITCY--EQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACAS 260
Query: 89 LPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A + G Q+HA ++K + V+ AL+DMY+K + E+ F + ++VV+ +
Sbjct: 261 LCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETS 320
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++S + R K A +F MT+ V
Sbjct: 321 MVSGYARAASVKAARFMFSKMTQRNV 346
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F +L +C + + VHA ++ E ++ L+D+Y K L ++ + F +
Sbjct: 18 FAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMP 77
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ TWN+L+S + G EA +F +M
Sbjct: 78 QRNTFTWNSLISVLTKSGFLDEAARLFGSM 107
>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Vitis vinifera]
Length = 628
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 69/139 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D N + YT++ LF M T VL AC L A
Sbjct: 212 LFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGA 271
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ VH+ + G V TAL+DMYSK G L ++ F +I+ KDVV WN+++
Sbjct: 272 LESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVG 331
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG ++EA +F++M R
Sbjct: 332 YAMHGFSQEALQLFKSMCR 350
Score = 52.4 bits (124), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A+TF+ +L C P GK +H+ +K G DS+ V+T L+D+Y++ G + + + F
Sbjct: 127 NAFTFSSILKLCPIEP----GKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLF 182
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ K +V+ A+L+ + +HG A +F M
Sbjct: 183 DTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGM 216
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
Q+HA++ + G D P++ L Y+ G L SV F + V W A++ G
Sbjct: 48 QIHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRG 107
Query: 157 LAKEAFGVFQAMTRERVE 174
L ++A + M + VE
Sbjct: 108 LHEQALNFYAQMLTQGVE 125
>gi|222639882|gb|EEE68014.1| hypothetical protein OsJ_25982 [Oryza sativa Japonica Group]
Length = 594
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 79/143 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + + NS L SY+ L+ M +++ +TF+ +L S L
Sbjct: 230 RVFDGVPQKSVVAWNSMLASYSLHGCSEEALDLYHSMCEGGVDIDQFTFSTMLRVFSRLG 289
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E KQ HA +I+ G + V TAL+D+Y K+GL+ ++ F+ + +++++WNAL++
Sbjct: 290 LLEHAKQAHAGLIQTGLPLDIVGNTALVDLYCKWGLMEDARNVFERMPIRNLISWNALIA 349
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ HG+ ++A +F+ + E +
Sbjct: 350 GYGYHGMGQKAIEMFEELIAEGI 372
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + G+Q+H + K G + + AL+DMY+K G L E+ F + K VV WN++
Sbjct: 187 LGSARAGQQLHCCVAKTGMYEDQYLSCALIDMYNKCGKLDEARRVFDGVPQKSVVAWNSM 246
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVEF 175
L+S+ HG ++EA ++ +M V+
Sbjct: 247 LASYSLHGCSEEALDLYHSMCEGGVDI 273
>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
Length = 635
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D+ S + + Y +R + LF M + + +T+ VL AC+ +
Sbjct: 219 VFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYAGVLRACAEFTS 278
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GKQVH M K ++AL+ MYSKYG +G +V F+ + D+V+W A++S
Sbjct: 279 EKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKLDLVSWTAMISG 338
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ ++G EA F + R
Sbjct: 339 YAQNGQPDEALRYFDMLLR 357
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 46/80 (57%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+++H +++ G D++ VV +AL DMY+K G + ++ F + +DVV+W A++ +
Sbjct: 181 GRELHCHVVRRGIDADAVVWSALADMYAKCGRVDDARSVFDRMPVRDVVSWTAMVERYFD 240
Query: 155 HGLAKEAFGVFQAMTRERVE 174
E F +F M R ++
Sbjct: 241 ARRDGEGFRLFVRMLRSGIQ 260
>gi|224120376|ref|XP_002318314.1| predicted protein [Populus trichocarpa]
gi|222858987|gb|EEE96534.1| predicted protein [Populus trichocarpa]
Length = 539
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 65/112 (58%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
C + + + VL AC+++ A GK VH + ++ G+ + V AL+DMY+K
Sbjct: 1 MCKLGDIDMRPDVVSLVNVLPACASMGAWLHGKAVHGIAVRSGSFEDLFVGNALVDMYAK 60
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
G++ E+ + F I+ KDVV+WNA+++ + + G ++A G+F+ M E +E
Sbjct: 61 CGMVDEASKVFDRIKEKDVVSWNAMVNGYSQIGRFEDALGLFEKMREENIEL 112
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
T VF E+ HG+ + +LFS+ + + +T + L AC+
Sbjct: 133 TLDVFREMQHGEANDA-LELFSWM-------------FKQDGLVKPNCFTISCALIACAR 178
Query: 89 LPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A G+Q+HA +++ DS + V L+DMY+K G + + F ++ K+ V+W +
Sbjct: 179 LAALRLGRQIHAYILRNHFDSAFLYVANCLIDMYAKSGDIDVARFVFDNLKQKNFVSWTS 238
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
L++ + HG KEA VF M R
Sbjct: 239 LMTGYGMHGRGKEALEVFDEMRR 261
>gi|302142563|emb|CBI19766.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 34 DEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPE 93
D + D +S NS + Y ++ + +F M S C+ + T +L AC+ L A +
Sbjct: 140 DGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAK 199
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+ K++H +++ SE V L+D Y+K G + + F+ I KD+++WN+L++ ++
Sbjct: 200 KVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYV 259
Query: 154 RHGLAKEAFGVFQAMTRERVE 174
HG + A +F MT+ V+
Sbjct: 260 LHGCSDSALDLFDQMTKMGVK 280
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 56/99 (56%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T T + AC++L A ++G ++H++ +K G + +V +L+DMYSK G L ++ F
Sbjct: 9 NGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVF 68
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I KDV TWN+++ + + G +A+ +F M V
Sbjct: 69 DMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDV 107
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A+ L Y VY +F IS D+ S NS + Y + LF M
Sbjct: 217 LSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTK 276
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE--PVVK--TALMDMYSKYG 125
+ + TF ++ A S ++GKQV + M++ D + P ++ +A++D+ + G
Sbjct: 277 MGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMME---DYQILPGLEHHSAMIDLLGRSG 333
Query: 126 LLGESVEAFKEIEFK-DVVTWNALLSSFLRHG 156
LGE++E +++ + D W ALL++ HG
Sbjct: 334 KLGEAIEFIEDMAIEPDSCIWAALLTASKIHG 365
>gi|357467379|ref|XP_003603974.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493022|gb|AES74225.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 566
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V QVFD +SH D+ S S + + LF M +++ T VL C
Sbjct: 143 VIARQVFDRMSHRDVVSWTSMIAGFVNHHLTVEAIQLFQRMLEVGVDVNEATVISVLRGC 202
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ A G++VH ++ + G D + V TAL+ MYSK G L + E F ++ +DV W
Sbjct: 203 ADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGCLESAREVFDDVLDRDVFVWT 262
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++ HG+ KEA +F M
Sbjct: 263 AMIYGLACHGMCKEAIELFLEM 284
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 45 NSQLFSYTRSRN----FPATWALFCYM---HSTCLNLTAYTFTPVLGACSALPAPERGKQ 97
N+ + +Y+ + N F A +LF +M H+ +T++ L +C L ++ KQ
Sbjct: 54 NTIIRAYSHTSNPTHHFQAL-SLFIFMLQPHTNVPKPDTFTYSFALKSCGRLKLTQQAKQ 112
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H + K G + ++ AL+ MYS+ G L + + F + +DVV+W ++++ F+ H L
Sbjct: 113 LHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQVFDRMSHRDVVSWTSMIAGFVNHHL 172
Query: 158 AKEAFGVFQAM 168
EA +FQ M
Sbjct: 173 TVEAIQLFQRM 183
>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 861
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S NS + Y LF M + +T+ VL C+ L + GKQ+HA +
Sbjct: 528 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 587
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
IK S+ + + L+DMYSK G L +S F++ +D VTWNA++ + HG +EA
Sbjct: 588 IKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 647
Query: 163 GVFQAMTRERVE 174
+F+ M E ++
Sbjct: 648 QLFERMILENIK 659
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+ + + S N+ + Y++ + LF + S+ L + + V AC+ +
Sbjct: 296 LFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 355
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q++ L IK + V A +DMY K L E+ F E+ +D V+WNA++++
Sbjct: 356 LSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 415
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++G E +F +M R R+E
Sbjct: 416 HEQNGKGYETLFLFVSMLRSRIE 438
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S NS L Y ++ + +F M TF +L CS L G Q+H
Sbjct: 102 DVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIH 161
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++++ G D++ V +AL+DMY+K ES+ F+ I K+ V+W+A+++ +++ L
Sbjct: 162 GVVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 221
Query: 160 EAFGVFQAMTR 170
A F+ M +
Sbjct: 222 LALKFFKEMQK 232
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D S N+ + ++ ++ T LF M + + +TF VL AC+
Sbjct: 396 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSVLKACTG-G 454
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE----------------SVEAF 134
+ G ++H+ ++K G S V +L+DMYSK G++ E ++E
Sbjct: 455 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEEL 514
Query: 135 KEIEFKDV----VTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ K + V+WN+++S ++ +++A +F M
Sbjct: 515 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 552
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 64/132 (48%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A KR+V + +VF I + S ++ + ++ F M ++ +
Sbjct: 184 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 243
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL +C+AL G Q+HA +K ++ +V+TA +DMY+K + ++ F + E
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDKSENL 303
Query: 141 DVVTWNALLSSF 152
+ ++NA+++ +
Sbjct: 304 NRQSYNAMITGY 315
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 31/121 (25%)
Query: 86 CSALPAPERGKQVHALMIKGG---------------TDSEPVVKTALM------------ 118
C+ A E GKQ HA MI G T+S V +++
Sbjct: 16 CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75
Query: 119 -DMYSKYGLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
M + Y V+A F + +DVV+WN++LS +L++G ++ VF M R E
Sbjct: 76 NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135
Query: 175 F 175
F
Sbjct: 136 F 136
>gi|255540507|ref|XP_002511318.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550433|gb|EEF51920.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 441
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD++ D+ + ++ + Y+++R LF M L+ T VL C+AL
Sbjct: 282 RRLFDQMDGRDVVAWSAMISGYSQARRCQEAVDLFNEMQMANLDPNEVTMVSVLSCCAAL 341
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A GK +H + + G + + TAL+D Y K GL+ ++E F+ + K+V +W AL+
Sbjct: 342 GALGTGKWIHLYIKRKGMNLTVTLGTALVDFYGKCGLVDSAIEVFQLMPVKNVYSWTALI 401
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+G K A +Q M VE
Sbjct: 402 QGLANNGQGKRALEYYQLMRESNVE 426
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD I D S+ N + ++T R+ A F M + +TF L ACS
Sbjct: 78 YALSIFDNIDGPDSSAYNIMIRAFTLKRSPQKALAFFKQMLEEAVAFDEFTFPCTLKACS 137
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GKQ+HA ++K G S +V L+ MY+ G + + F + +D+ WN+
Sbjct: 138 RLRGRKEGKQIHAQIVKYGFGSNCIVLNTLIHMYANCGEIEIARNMFDGMSERDIFAWNS 197
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ S +++ G ++ +F+ M V F
Sbjct: 198 MFSGYVKSGYYEDTVRLFEEMRELGVGF 225
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+FD +S D+ + NS Y +S + T LF M + T VL AC L
Sbjct: 181 RNMFDGMSERDIFAWNSMFSGYVKSGYYEDTVRLFEEMRELGVGFNDITLISVLAACGRL 240
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+ + + G D + TAL+DMY+K G + ++ F +++ +DVV W+A++
Sbjct: 241 ADVELGEWIAKYVRVNGLDRNMNLVTALVDMYAKCGEVDKARRLFDQMDGRDVVAWSAMI 300
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S + + +EA +F M
Sbjct: 301 SGYSQARRCQEAVDLFNEM 319
>gi|359372822|gb|AEV42255.1| hypothetical protein [Beta vulgaris]
Length = 223
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 76/150 (50%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R ++VFD + ++ S + + + ++ M + + YTF+
Sbjct: 61 RRLDNAYKVFDGMLQRNVVSWTALICGCLHQGDAEGALSILYEMSFSDVRPNEYTFSSSF 120
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS L E+G QVH L +K G PVV +++DMY+K G +G++ AF E+ K++
Sbjct: 121 KACSLLGVHEKGMQVHGLCVKAGYQWLPVVANSIVDMYAKCGKMGDAALAFDEMGVKNLR 180
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
WN +++ + G K + +F+ + +E V
Sbjct: 181 AWNTVIAGYSSQGDGKSSIELFERLQKEGV 210
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ L CS E+G Q HA ++K G S+ ++ L+DMYSK L + + F +
Sbjct: 15 ISKFLRDCSKNMFLEQGMQTHAAVVKMGFWSDMIISNNLVDMYSKCRRLDNAYKVFDGML 74
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
++VV+W AL+ L G A+ A + M+
Sbjct: 75 QRNVVSWTALICGCLHQGDAEGALSILYEMS 105
>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Brachypodium distachyon]
Length = 940
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 79/141 (56%), Gaps = 2/141 (1%)
Query: 31 QVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ + G D++S NS + ++ F LF M L++ +YT VL C+ L
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTEL 279
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+++HA ++K G++ + AL+ MY+K G + ++ F+EI+ KD ++WN++L
Sbjct: 280 AQLNLGRELHAALLKSGSEVN-IQCNALLVMYTKCGRVDSALRVFREIDEKDYISWNSML 338
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
S ++++GL EA M R
Sbjct: 339 SCYVQNGLYAEAIEFISEMLR 359
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
++ ++F+ + D+ + S + Y S LF M ST + + +LGA
Sbjct: 519 HSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIG 578
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + +GK+VH +I+ E + ++L+DMYS G L +++ F ++ KD+V W A
Sbjct: 579 GLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCKDMVLWTA 638
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++++ HG K+A +F+ M + V
Sbjct: 639 MINATGMHGHGKQAIDLFKRMLQTGV 664
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 2/151 (1%)
Query: 25 RYV-YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
RY+ Y+ VFD + D S + + Y +S +F + + +L
Sbjct: 415 RYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMMIGSIL 474
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS L KQ+H I+ G + VVK ++D+Y + G + S++ F+ +E KD+V
Sbjct: 475 EACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVEQKDIV 533
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TW ++++ + GL EA +F M V+
Sbjct: 534 TWTSMINCYANSGLLNEALVLFAEMQSTDVQ 564
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +ADA +FD +S + S N+ + +Y S + ++ M + +
Sbjct: 108 CGRVADA--------RLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASG 159
Query: 75 TA---YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
A T VL A G +VH L +K G D V AL+ MY+K G+L ++
Sbjct: 160 VAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGILDSAM 219
Query: 132 EAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F+ + + +DV +WN+++S L++G+ +A +F+ M R
Sbjct: 220 RVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQR 259
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF EI D S NS L Y ++ + M + A L
Sbjct: 321 RVFREIDEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLG 380
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK+VHA IK DS+ V LMDMY K + S F + KD ++W +++
Sbjct: 381 WLLNGKEVHAYAIKQRLDSDTQVGNTLMDMYMKCRYIEYSAHVFDRMRIKDHISWTTIIT 440
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + EA +F+ +E ++
Sbjct: 441 CYAQSSRHIEALEIFREAQKEGIK 464
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 2/89 (2%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
VL +A A +G QVHA + G+ + + T L+ MY K G + ++ F +
Sbjct: 64 VLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLLFDGMSS 123
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V +WNAL+ ++L G A EA GV++AM
Sbjct: 124 RTVFSWNALIGAYLSSGSACEALGVYRAM 152
>gi|357153075|ref|XP_003576330.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g18840-like [Brachypodium distachyon]
Length = 535
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ D S NS + SY + +F M + + T T VLGAC+ +
Sbjct: 243 RVFREMPGRDAVSWNSLIGSYAKLGQCARALKVFREMQDSGVEPTELTLVSVLGACTEIG 302
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK VH + G ++ V AL+DMY+K G L + + F+ + +D+ WNA++
Sbjct: 303 ELELGKGVHGYLSSKGVLADGYVGNALVDMYAKCGSLELARQVFESMSTRDITCWNAMIV 362
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
HG ++EA +F M E
Sbjct: 363 GLSVHGYSREALELFNVMRVE 383
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 47/82 (57%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+G ++H ++K G ++ V+ AL+ MY K G LG++ + F + ++ V+WNAL+++
Sbjct: 143 KGMELHGCVLKLGCGADRYVQNALVSMYGKLGRLGDARKVFDGMPARNAVSWNALVAAHG 202
Query: 154 RHGLAKEAFGVFQAMTRERVEF 175
G ++ A V Q M V +
Sbjct: 203 DVGDSRGAERVSQEMPERSVSW 224
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ G + + F+E+ +D V+WN+L+ S+ + G A VF+ M VE
Sbjct: 232 HARVGDMEAAARVFREMPGRDAVSWNSLIGSYAKLGQCARALKVFREMQDSGVE 285
>gi|242088609|ref|XP_002440137.1| hypothetical protein SORBIDRAFT_09g026680 [Sorghum bicolor]
gi|241945422|gb|EES18567.1| hypothetical protein SORBIDRAFT_09g026680 [Sorghum bicolor]
Length = 878
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC-YMHSTCLNLTAYTFTPVLGACSAL 89
Q+FDE+ H D+ S + + ++ F LF + S + + + VL AC+ L
Sbjct: 117 QLFDEMPHRDVVSWCTVISAHVSRGIFVEAIGLFKDLLSSDQVKPNQFVISSVLNACARL 176
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G VHAL++K G + V+ L+DMY+K G G++ F EI K V WNA++
Sbjct: 177 GVMELGLMVHALVVKCGLGVDRFVEVGLVDMYAKCGNTGDAFRLFNEIPMKGSVAWNAMI 236
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
F+ +G EA +F+ M +
Sbjct: 237 YGFVENGCLVEAAELFRDMHK 257
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 83/164 (50%), Gaps = 11/164 (6%)
Query: 7 MTNFPAKT-CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
+ N AK CI A L +TH +F +L N+ L Y + LFC
Sbjct: 504 LVNMYAKCHCIEGAAEL-----FTHALFPR----NLVVTNAMLSGYCWNFLPDKALLLFC 554
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKY 124
+ L +TF+ +LGACS + A + G+Q+H ++K G+++ + +V A++D+Y K
Sbjct: 555 REYQFGLCPDRFTFSTILGACSDIRAKQAGEQIHGYLVKIGSENLDVIVGNAIIDLYVKC 614
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G + + F ++ +++ ++ L+ ++++ + EA +F M
Sbjct: 615 GCISSACRFFHSMKSRNINSYAMLMLGYIQNRCSDEALHLFSKM 658
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + D+ S + + ++ F + F + +T L + V+ AC+ L
Sbjct: 419 IFKTMQSPDVVSWSGVMAGCVKNLQFERACSYFRQLSNTGAPLDQHCVVTVINACTGLQD 478
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNALLS 150
++G+Q+H+ +K G + +L++MY+K + + E F F +++V NA+LS
Sbjct: 479 LDKGRQIHSFALKLGLLLADFISASLVNMYAKCHCIEGAAELFTHALFPRNLVVTNAMLS 538
Query: 151 SFLRHGLAKEAFGVF 165
+ + L +A +F
Sbjct: 539 GYCWNFLPDKALLLF 553
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 102 MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
++K G + +V L+D Y+K G L + F E+ +DVV+W ++S+ + G+ EA
Sbjct: 87 IVKRGFACDMLVSNVLLDSYAKGGSLAAGRQLFDEMPHRDVVSWCTVISAHVSRGIFVEA 146
Query: 162 FGVFQAM 168
G+F+ +
Sbjct: 147 IGLFKDL 153
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F + +++S + Y ++R LF M + L TF +L C L A
Sbjct: 624 FHSMKSRNINSYAMLMLGYIQNRCSDEALHLFSKMQHSGLRANRVTFARILRGCRDLCAI 683
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
+ G+Q+HA +IK G S+ V AL+ MY + ES
Sbjct: 684 DLGRQLHASIIKMGLLSDVYVTNALVGMYKATDIQTES 721
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
S+ L+L V+G C E +Q+HA +K G V ALM +YS+ G L
Sbjct: 358 SSGLSLREGDMVTVVGICQI---EEEVRQMHAFTLKTGGFCYTNVCNALMSVYSELGSLM 414
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ FK ++ DVV+W+ +++ +++ + A F+ ++
Sbjct: 415 CAESIFKTMQSPDVVSWSGVMAGCVKNLQFERACSYFRQLS 455
>gi|255586940|ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223525897|gb|EEF28314.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 74/140 (52%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++FD++S + S NS + Y R+ F LF M + + +T +L AC+
Sbjct: 207 SRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIEPSEFTMVSLLNACAC 266
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A +G+ +H M+K + P+V TA++DMYSK G + ++V+ F+ + + WN++
Sbjct: 267 LGAIRQGEWIHDYMVKKKFELNPIVVTAIIDMYSKCGSIDKAVQVFQSAPRRGLSCWNSM 326
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ +G EA +F +
Sbjct: 327 ILGLAMNGQENEALQLFSVL 346
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGAC 86
Y + VF +I + ++ + N+ + ++RS + +L+ M T + T+ V A
Sbjct: 73 YAYLVFVQIQNPNIFAWNTIIRGFSRSSVPQNSISLYIDMLLTSPVQPQRLTYPSVFKAF 132
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY------------------------- 121
+ L G Q+H MIK G +++ ++ ++ MY
Sbjct: 133 AQLDLASEGAQLHGKMIKLGLENDSFIRNTILFMYVNCGFTSEARKVFDRGMDFDIVAWN 192
Query: 122 ------SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+K GL+ ES F ++ ++ V+WN+++S ++R+G +A +FQ M ER+E
Sbjct: 193 TMIMGVAKCGLVDESRRLFDKMSLRNAVSWNSMISGYVRNGRFFDALELFQKMQVERIE 251
>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
Length = 1113
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ F+ +S +L S N+ L R+ NF + L + L ++A+TF +L + +
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +G+Q+H+ ++K G V AL+ MYSK G + + F +E ++V++W +++
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F +HG A F M E V+
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVK 572
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 4 FIRMTNFPAKTCI--SIADALPK---RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP 58
++ +F + C+ S+ D K + ++VFD++S ++ + + + + FP
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW-TLMITRCMQMGFP 250
Query: 59 -ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL 117
F M + +T + V AC+ L GKQ+H+ I+ G + V+ +L
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSL 308
Query: 118 MDMYSKY---GLLGESVEAFKEIEFKDVVTWNALLSSFLRH-GLAKEAFGVFQAM-TRER 172
+DMY+K G + + + F +E V++W AL++ ++++ LA EA +F M T+
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 173 VE 174
VE
Sbjct: 369 VE 370
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 4/147 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA--LFCYMHSTC-LNLTAYTFTPVLGAC 86
+VFD + + S + + Y ++ N AT A LF M + + +TF+ AC
Sbjct: 325 RKVFDRMEDHSVMSWTALITGYMKNCNL-ATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
L P GKQV K G S V +++ M+ K + ++ AF+ + K++V++N
Sbjct: 384 GNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYN 443
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
L R+ ++AF + +T +
Sbjct: 444 TFLDGTCRNLNFEQAFKLLSEITEREL 470
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ + TF+ +L +C GK VHA +I+ + + V+ +L+ +YSK G ++ +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 134 FKEIEF---KDVVTWNALLSSFLRHGLAKEAFGVF 165
F+ + +DVV+W+A+++ + +G +A VF
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF 154
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 6/145 (4%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTAYTFTPVL 83
Y VFDE+ ++ S ++ + Y ++ LF M H + N + T VL
Sbjct: 227 YASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPN--SVTMVSVL 284
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+A A E+GK +HA +++ G DS V +AL+ MY++ G L F + KDVV
Sbjct: 285 QACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVV 344
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
WN+L+SS+ HG ++A +F+ M
Sbjct: 345 LWNSLISSYGLHGYGRKAIKIFEEM 369
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
Query: 77 YTFTPVLGACSA----LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
+T+T +L AC A + ++GK++HA +++ G + V T LMDMY+++G + +
Sbjct: 171 FTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASA 230
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F E+ K+VV+W+A+++ + ++G EA +F+ M
Sbjct: 231 VFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREM 266
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
VH L++ GG D +P + T L++M+S+ + + + F + + + WNAL + G
Sbjct: 90 DVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAG 149
Query: 157 LAKEAFGVFQAMT 169
+ ++ M
Sbjct: 150 RGNDVLELYPRMN 162
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 63/129 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + N+ + YT+S + T LF MH +T VL C L A +GKQVH
Sbjct: 488 DLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVH 547
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A IK G D + V + ++DMY K G + + AF I D V W L+S + +G +
Sbjct: 548 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEE 607
Query: 160 EAFGVFQAM 168
A VF M
Sbjct: 608 RALHVFSQM 616
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 55/92 (59%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T + A S L A E+G+Q+HA +K S+P V T+L+DMY+K G + ++ FK
Sbjct: 626 FTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYCLFKR 685
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
IE ++ WNA+L +HG KEA +F+ M
Sbjct: 686 IEMMNITAWNAMLVGLAQHGEGKEALQLFKQM 717
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRS-----RNFPATWALFCYMHSTCLNLTAYTFTPV 82
Y +VFD++ DL S NS L +Y +S N + LF + + + T +P+
Sbjct: 99 YARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPM 158
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C + H K G D + V AL+++Y K+G + E F+E+ ++DV
Sbjct: 159 LKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDV 218
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQA 167
V WN +L ++L G +EA + A
Sbjct: 219 VLWNLMLKAYLEMGFKEEAIDLSSA 243
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 66/141 (46%), Gaps = 2/141 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP- 90
VF+ +S DL S NS + +S LF + L YT T VL A S+LP
Sbjct: 379 VFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPE 438
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
KQ+H IK ++ V TAL+D YS+ + E+ F F D+V WNA++S
Sbjct: 439 GLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGRNNF-DLVAWNAMMS 497
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ + + +F M ++
Sbjct: 498 GYTQSHDGHKTLELFALMHKQ 518
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
++ S N L Y + + A F M + L TF VL L + G+QVH
Sbjct: 286 EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVH 345
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ +K G D V +L++MY K +G + F + +D+++WN++++ + L
Sbjct: 346 CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEV 405
Query: 160 EAFGVFQAMTR 170
EA +F + R
Sbjct: 406 EAVCLFMQLLR 416
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
GK HA ++ + E + L+ MYSK G L + F ++ +D+V+WN++L+++ +
Sbjct: 65 GKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQ 124
Query: 155 --HGL---AKEAFGVFQAMTRERV 173
G+ KEAF +F+ + ++ V
Sbjct: 125 SSEGVVENVKEAFLLFRILRQDVV 148
>gi|147767158|emb|CAN71514.1| hypothetical protein VITISV_021786 [Vitis vinifera]
Length = 690
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
AYT + VL C+++ A GKQ+H +++ G S + AL+ MY+K G L S+ F
Sbjct: 443 NAYTLSIVLSICASISALRHGKQIHGYILRSGVFSVTSLGNALITMYAKCGDLDWSLRIF 502
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D+V+WNA++S++ +HG KEA F+AM
Sbjct: 503 NVMNGRDIVSWNAMISAYAQHGKGKEAVHFFKAM 536
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 75/181 (41%), Gaps = 34/181 (18%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTR--------------SRNFPATWA---- 62
A K V +VF+EI + D+ S + L + T+ R P W
Sbjct: 105 AKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQIGYACHLFNQTPRMIPVVWNAIIT 164
Query: 63 -------------LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
LF MH + YTF VL CS L + G++VH L+IK G
Sbjct: 165 GCAENKHTEIALNLFREMHQLGVRHDKYTFASVLSLCS-LELLDFGREVHTLVIKTGFLV 223
Query: 110 EPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
V AL+ MY G + ++ E F+E E D +T+N ++ G +EA +F+
Sbjct: 224 RASVINALLTMYFNSGKVADAYEVFEEAESTVHDDITFNVMIGGLASVGRDEEALIMFKE 283
Query: 168 M 168
M
Sbjct: 284 M 284
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 1/132 (0%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSALPAPERGKQV 98
L +N L TRS + A+ LF +HS+ L +T + L AC+ L G Q+
Sbjct: 22 QLIKINQLLAELTRSHHNSASVQLFVQIHSSNYLKPDHFTLSSTLTACANLRYAASGNQL 81
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
HA I+ G + V L+ Y+K L F EIE DV +W LLS+ + G
Sbjct: 82 HAYSIQTGLKAYTHVGNTLLSFYAKSKDLVSVQRVFNEIENPDVYSWTTLLSACTKLGQI 141
Query: 159 KEAFGVFQAMTR 170
A +F R
Sbjct: 142 GYACHLFNQTPR 153
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F M CL T TF V+ +CS+ QVHA IK G ++ V A M MYS
Sbjct: 280 MFKEMQEACLRPTELTFVSVMSSCSSARVSH---QVHAQAIKMGFEACTPVSNAAMTMYS 336
Query: 123 KYGLL 127
G L
Sbjct: 337 SCGNL 341
>gi|356545004|ref|XP_003540936.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic-like [Glycine max]
Length = 629
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 70/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D + R+ F +F M + TF VL AC+ L
Sbjct: 212 EVFNEMGTRDTVCWTMVIDGLVRNGEFNRGLEVFREMQVKGVEPNEVTFVCVLSACAQLG 271
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E G+ +HA M K G + V AL++MYS+ G + E+ F + KDV T+N+++
Sbjct: 272 ALELGRWIHAYMRKCGVEVNRFVAGALINMYSRCGDIDEAQALFDGVRVKDVSTYNSMIG 331
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
HG + EA +F M +ERV
Sbjct: 332 GLALHGKSIEAVELFSEMLKERV 354
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 17/152 (11%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
P Y+YT + +S G SYT + N LFC M + Y T +
Sbjct: 88 PNVYLYTSLIDGFVSFG----------SYTDAIN------LFCQMVRKHVLADNYAVTAM 131
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC A GK+VH L++K G + + L+++Y K G+L ++ + F + +DV
Sbjct: 132 LKACVLQRALGSGKEVHGLVLKSGLGLDRSIALKLVELYGKCGVLEDARKMFDGMPERDV 191
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAM-TRERV 173
V ++ S G+ +EA VF M TR+ V
Sbjct: 192 VACTVMIGSCFDCGMVEEAIEVFNEMGTRDTV 223
Score = 38.5 bits (88), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%)
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
P+ + +H IK T +P V L+ +Y K + +++ F+ + +V + +L+
Sbjct: 40 PKHVQSIHCHAIKTRTSQDPFVAFELLRVYCKVNYIDHAIKLFRCTQNPNVYLYTSLIDG 99
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
F+ G +A +F M R+ V
Sbjct: 100 FVSFGSYTDAINLFCQMVRKHV 121
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F E++ +L + N+ + Y RS + + +LF M S +TFT + AC+ L
Sbjct: 267 RCFGELTEKNLITWNTLIAGYERSDS-SESLSLFFQMGSEGYKPNCFTFTSITAACANLA 325
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+QVH +++ G D + +L+DMY+K G + +S + F ++ +D+V+W ++
Sbjct: 326 VLSCGQQVHGGIVRRGFDKNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMI 385
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ HG KEA +F M + ++
Sbjct: 386 GYGAHGYGKEAVKLFDEMVQSGIQ 409
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+EI D+ + + + +T ++ W +F M + + A+T + VL AC +
Sbjct: 64 NLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSEVQPNAFTMSSVLKACKGMK 123
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMY-SKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G H+L K G D V+ AL+DMY + + +++ F +I K V+W L+
Sbjct: 124 ALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLKTAVSWTTLI 183
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F G F+ M E V
Sbjct: 184 AGFTHRGDGYSGLLAFRQMLLEDV 207
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 12 AKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
A +C ++ DAL VF++I S + + +T + + F M
Sbjct: 155 AASCATMDDAL--------SVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLED 206
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ +++F+ AC+++ + GKQ+HA + K G + V +++DMY + L ++
Sbjct: 207 VGPNSFSFSIAARACASISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAK 266
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ K+++TWN L++ + R + E+ +F M E
Sbjct: 267 RCFGELTEKNLITWNTLIAGYERSD-SSESLSLFFQMGSE 305
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V T L+ Y GL E+ F EI +DVVTW A++ F +A+ +F M R
Sbjct: 44 VWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRS 103
Query: 172 RVE 174
V+
Sbjct: 104 EVQ 106
>gi|347954460|gb|AEP33730.1| chlororespiratory reduction 21, partial [Capsella bursa-pastoris]
Length = 820
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 84/169 (49%), Gaps = 6/169 (3%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ C+ +A +L Y +VFDEI ++ + N+ + Y ++ L
Sbjct: 194 EDCVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSD 253
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T T + L A + + E G Q HA+ I G + + ++ T+L++ Y K GL
Sbjct: 254 MRKDGVEPTRVTVSTCLSASANMAGVEEGTQCHAIAIVNGLELDNILGTSLLNFYCKVGL 313
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + F + KDVVTWN L+S +++ GL ++A + Q M E++++
Sbjct: 314 IEYAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKY 362
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 55/93 (59%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH ++K G + V ++L DMY K G+L ++ + F EI ++
Sbjct: 168 VFKACGALQWSRFGRGVHGYVLKAGLEDCVFVASSLADMYGKCGVLDDARKVFDEIPERN 227
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VV WNAL+ ++++G+ +EA + M ++ VE
Sbjct: 228 VVAWNALMVGYVQNGMNEEAIRLLSDMRKDGVE 260
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 64/146 (43%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ + N + Y + + M L T ++ A +
Sbjct: 316 YAEMIFDRMFEKDVVTWNLLISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 375
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V + +S+ V+ + MDMY+K G + ++ + F KD++ WN
Sbjct: 376 RTENLKLGKEVQCXCFRHSLESDIVLASTAMDMYAKCGSIVDAKKVFDSTVEKDLILWNT 435
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ G + EA +F M E V
Sbjct: 436 LLAAYAESGHSGEALRLFYEMQLESV 461
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + + A++ T L A + L + G+ +H +I+ S ++T+L+DMY+K G
Sbjct: 526 MQESGMRPNAFSITVALSASANLASXHFGRSIHGYIIRNLRHSSSASIETSLVDMYAKCG 585
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ F+ ++ +NA++S++ G EA +++++
Sbjct: 586 DINKAERVFESKLSNELPLYNAMISAYALXGNVTEAVALYRSL 628
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 95 GKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GKQ+HA ++K G ++T L+ Y+K L + F ++ ++V +W A++
Sbjct: 78 GKQIHARILKNGDLYARNEYIETKLVIFYAKCDDLEIAEVLFSKLRVRNVFSWAAIIGVK 137
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
R GL + A F M +
Sbjct: 138 CRMGLCEGALMGFVEMLENEI 158
>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 64/106 (60%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF + T + ++A+TF +L +++ A +G+Q+H ++KGG S + AL+ MYS
Sbjct: 194 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 253
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ G + + + F E+E ++V++W ++++ F +HG A A +F M
Sbjct: 254 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQM 299
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ F+ +S +L S N+ L R+ NF + L + L ++A+TF +L + +
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +G+Q+H+ ++K G V AL+ MYSK G + + F +E ++V++W +++
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F +HG A F M E V+
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVK 572
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 4 FIRMTNFPAKTCI--SIADALPK---RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP 58
++ +F + C+ S+ D K + ++VFD++S ++ + + + + FP
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW-TLMITRCMQMGFP 250
Query: 59 -ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL 117
F M + +T + V AC+ L GKQ+H+ I+ G + V+ +L
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSL 308
Query: 118 MDMYSKY---GLLGESVEAFKEIEFKDVVTWNALLSSFLRH-GLAKEAFGVFQAM-TRER 172
+DMY+K G + + + F +E V++W AL++ ++++ LA EA +F M T+
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 173 VE 174
VE
Sbjct: 369 VE 370
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWA--LFCYMHSTC-LNLTAYTFTPVLGACS 87
+VFD + + S + + Y ++ N AT A LF M + + +TF+ AC
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNL-ATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L P GKQV K G S V +++ M+ K + ++ AF+ + K++V++N
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
L R+ ++AF + +T +
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITEREL 470
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ + TF+ +L +C GK VHA +I+ + + V+ +L+ +YSK G ++ +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 134 FKEIEF---KDVVTWNALLSSFLRHGLAKEAFGVF 165
F+ + +DVV+W+A+++ + +G +A VF
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF 154
>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33170-like [Cucumis sativus]
Length = 840
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 8/169 (4%)
Query: 8 TNFPAKTCISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
T F A C ++++AL Y VF++I D+ S S + Y +
Sbjct: 366 TGFDA--CKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKAL 423
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LFC M + ++L + V AC+ L E G+QVHA IK S + +L+ MY
Sbjct: 424 QLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMY 483
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+K G L +++ F +E ++V++W A++ + ++GL + F++M +
Sbjct: 484 AKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEK 532
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+ D + D+ NS + LF MH+ + + +T+ VL + ++
Sbjct: 293 ILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKN 352
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+ VH+L IK G D+ V AL+DMY+K G L +++ F +I KDV++W +L++
Sbjct: 353 LKIGESVHSLTIKTGFDACKTVSNALVDMYAKQGNLSCALDVFNKILDKDVISWTSLVTG 412
Query: 152 FLRHGLAKEAFGVFQAMTRERVEF 175
++ +G ++A +F M RV+
Sbjct: 413 YVHNGFHEKALQLFCDMRTARVDL 436
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 54 SRNFPATWALFCY--MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP 111
++N + A+ C+ M + + +TF +L AC+++ A G+QVH +I G
Sbjct: 212 AQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNV 271
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V++AL+DMY+K G L + +E DVV WN+++ + HG +EA +F M
Sbjct: 272 YVQSALVDMYAKCGDLASARMILDTMEIDDVVCWNSMIVGCVTHGYMEEALVLFHKMHNR 331
Query: 172 RVEF 175
+
Sbjct: 332 DIRI 335
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 56/112 (50%), Gaps = 1/112 (0%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M S + YT VL ACS L GK +H IK ++ V T L+DMYSK
Sbjct: 122 FSQMWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSK 181
Query: 124 YGLLGESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L E+ F + + K+ V W A+L+ + ++G + +A F+ M + +E
Sbjct: 182 CKCLLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGME 233
>gi|347954454|gb|AEP33727.1| chlororespiratory reduction 21 [Arabis hirsuta]
Length = 824
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI ++ + N+ + Y ++ L M
Sbjct: 199 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMR 258
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GKQ HA+ I G + + ++ T++++ Y K GL+
Sbjct: 259 KEGVEPTRVTVSTCLSASANMRGIEEGKQSHAIAIVNGLELDNILGTSILNFYCKVGLID 318
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S ++ GL + A + Q M E ++F
Sbjct: 319 YAEMIFDRMIEKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKF 365
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ V AC AL G+ VH + K G V ++L DMY K G+L ++ + F E
Sbjct: 166 FVVPNVCKACGALQWSRFGRGVHGYVAKAGLHDCVFVASSLADMYGKCGVLDDARKVFDE 225
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I ++VV WNAL+ ++++G+ +EA + M +E VE
Sbjct: 226 IPERNVVAWNALMVGYVQNGMNEEAIRLLSDMRKEGVE 263
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ + N + Y + M L T + ++ A +
Sbjct: 319 YAEMIFDRMIEKDVVTWNLLISGYVHQGLVENAIYMCQLMRLENLKFDCVTLSTLMSAAA 378
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ V+ + +DMY+K G + ++ + F KD++ WN
Sbjct: 379 RTQNLKLGKEVQCYCIRHSFESDIVLASTAVDMYAKCGSVVDAKKVFDSTVQKDLILWNT 438
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 439 LLAAYAESGLSGEALRLFYEMQLESV 464
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + + ++ T L AC L + G+ +H +I+ S ++T+L+DMY+K G
Sbjct: 529 MQESGMRPNVFSITVALSACVNLASLHFGRSIHGYIIRNQQHSSSASIETSLVDMYAKCG 588
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ F + ++ +NA++S++ +G KEA +++++ +
Sbjct: 589 DINKAERVFGSKLYSELPLYNAMISAYALYGNVKEAVALYRSLEED 634
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 57/141 (40%), Gaps = 9/141 (6%)
Query: 37 SHGDLSSLNSQLFSY-------TRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+H D+ + N SY ++ +L M L + F +L C
Sbjct: 16 NHHDVQARNPSSTSYFHRVSSLCKNGEIREALSLVTEMDFRNLRIGPEIFGEILQGCVYX 75
Query: 90 PAPERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
G+Q+HA ++K G ++T L+ Y+K L + F ++ ++V +W A
Sbjct: 76 RDLRTGQQIHARILKNGDFYARNEYIETKLVIFYAKCDALEVAEVLFSKLRVRNVFSWAA 135
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ R GL + A F M
Sbjct: 136 IIGVKCRIGLVEGALMGFVEM 156
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ HGD+ S + + + +R+F LF M + +T L C
Sbjct: 594 VFDEMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTT 653
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +HA + + G +++ V+ AL++MYS G E++ F+ ++ +D+V+WN + ++
Sbjct: 654 LGLGKIIHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAA 713
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + GLAKEA +F+ M E V+
Sbjct: 714 YAQAGLAKEAVLLFRHMQLEGVK 736
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S N+ L + ++F F +M ++ +F +L ACS A + G+++H
Sbjct: 401 DVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIH 460
Query: 100 ALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEF--KDVVTWNALLSSFLRHG 156
+L++ D E V T L+ MY K G + E+ FKE+ + +VTWN +L ++ ++
Sbjct: 461 SLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQND 520
Query: 157 LAKEAFGVFQAMTRERV 173
+KEAFG M + V
Sbjct: 521 RSKEAFGALMEMLQGGV 537
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNF-PATWALFC 65
M N AK C S DA+ VF I D+ S + +Y + R F P +F
Sbjct: 172 MINMYAK-CGSPEDAIA--------VFLTIPEKDVVSWTAMAGAYAQERRFYPDALRIFR 222
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M L TF LGAC++L G +H+L+ + G +P+ AL++MY K G
Sbjct: 223 EMLLQPLAPNVITFITALGACTSL---RDGTWLHSLLHEAGLGFDPLAGNALINMYGKCG 279
Query: 126 LLGESVEAFKEIEFK---DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ FK + + D+V+WNA++S+ + G +A +F+ + E
Sbjct: 280 DWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLE 328
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + DL S N +Y ++ LF +M + TF+ L
Sbjct: 696 FETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALV 755
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GK H L + G DS+ V T L+ +Y+K G L E++ F+ VV NA++ +
Sbjct: 756 SDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGAL 815
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+HG ++EA +F M +E V
Sbjct: 816 AQHGFSEEAVKMFWKMQQEGV 836
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+T +L +C +GK+ H L+ G + + L++MY + G L E+ F ++E
Sbjct: 28 YTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKME 87
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++VV+W AL+S+ + G AF +F+ M E
Sbjct: 88 ERNVVSWTALISANAQSGAFARAFALFRTMLLE 120
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 65/128 (50%), Gaps = 5/128 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSA 88
H +F ++ ++ S + + + +S F +ALF M + +YT +L AC+
Sbjct: 80 HAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACAN 139
Query: 89 LPAPERGKQVHALMIKGGTDSEP----VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
G+ +HA++ + G + E +V A+++MY+K G +++ F I KDVV+
Sbjct: 140 SRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVS 199
Query: 145 WNALLSSF 152
W A+ ++
Sbjct: 200 WTAMAGAY 207
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A +FT VL +C + + + +++ G S ++TAL+ M+ + L ++ F
Sbjct: 541 ALSFTSVLSSCYC---SQEAQVLRMCILESGYRS-ACLETALISMHGRCRELEQARSVFD 596
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E++ DVV+W A++S+ + KE +F+ M E V
Sbjct: 597 EMDHGDVVSWTAMVSATAENRDFKEVHHLFRRMQLEGV 634
>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ DEI + + + + + SY RS + ++ F M + Y +L ACSA+
Sbjct: 138 KLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAML 197
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK VH +I+ +S+ V AL+ YS G LG S F ++ +DVV+W AL+S
Sbjct: 198 LXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALIS 257
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+++ GL EA +F M + V+
Sbjct: 258 AYMEEGLXDEAKHIFHLMQLDGVK 281
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 16 ISIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
I ++ AL Y H +VF I + S N+ + Y ++ LF M
Sbjct: 572 IFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLG 631
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLG 128
L ++ TF + AC + A G+ +H K D + + +AL+DMY+K G +
Sbjct: 632 EGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSIL 691
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ F KDV WNA++S+F HG+A+ AF VF M
Sbjct: 692 DAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQM 731
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T +L AC+ L A GK +H + K G V+ +++DMYSK G + + F +
Sbjct: 356 TIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKA 415
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E K+ WN ++++++ G ++A G+ ++M ++
Sbjct: 416 ENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKD 449
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 55/97 (56%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T T L AC+ L +GK++H ++ G + V +AL+DMY+K + + + F I
Sbjct: 539 TITGALPACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRI 598
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ V+WNAL++ ++ + +EA +F M E ++
Sbjct: 599 DGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQ 635
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E++ D+ S ++ + Y + + + L +M T + VL AC +
Sbjct: 375 IFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAI 434
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GKQ+HA ++ G + +V +AL++MY K G + E+ F E D+V+W A+++
Sbjct: 435 LEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMING 494
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG ++E +F+ + R
Sbjct: 495 YAEHGYSREVIDLFEKIPR 513
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSAL 89
++FD++S D S + + Y + + LF M + L + + + AC
Sbjct: 70 RMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLN 129
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K G + V +AL+DMY+K G + E F E+ ++VV+W A++
Sbjct: 130 SDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAII 189
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
+ +R G KEA F M R RVE+
Sbjct: 190 TGLVRAGYNKEALVYFSEMWRSRVEY 215
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 83/165 (50%), Gaps = 1/165 (0%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+++F A T ++ + K Y +F+++S D+ S + + + + F
Sbjct: 250 VSSFVANTLATMYNKCGK-LEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIR 308
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + ++ YTF V+ C+ L E G+Q+HAL++ G + V+ ++M MY+K G
Sbjct: 309 MRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQ 368
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
L S F E+ +D+V+W+ +++ + + G EAF + M E
Sbjct: 369 LTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRME 413
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ ++ S + + R+ F M + + +YTF L AC+
Sbjct: 172 RVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSG 231
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+++HA +K G D V L MY+K G L + F+++ +DVV+W +++
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ ++ G + A F M V
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDV 314
>gi|297808809|ref|XP_002872288.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318125|gb|EFH48547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 690
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + + S N + Y N+ ++ M S + TFT VL CS L A
Sbjct: 365 VFLKTQKDVVESWNVMISGYVSVGNWFKAVDVYDQMVSVGVQPDIVTFTSVLSTCSQLAA 424
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GKQ+H + + +++ ++ +AL+DMYSK G + E+ F I KDVV+W ++S+
Sbjct: 425 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNVKEASRIFNSIPKKDVVSWTVMISA 484
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG +EA F M +
Sbjct: 485 YGSHGQPREALYHFDEMQK 503
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFDE+ D++S N+ + S+ + + LF M + + + T + ACS L
Sbjct: 162 QVFDEMPERDVASWNTVISSFYQRGDAEKALELFGRMERSDFEPNSVSITVAISACSRLL 221
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
ERGK++H +K + + V +AL+DMY + L + E F+++ K +V WN+++
Sbjct: 222 CLERGKEIHRKYLKKEFELDEYVNSALVDMYGRCDFLEMAREVFQQMRRKSLVAWNSMIR 281
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ G +K + M E
Sbjct: 282 GYVARGDSKSCVELLNRMIIE 302
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 81/145 (55%), Gaps = 2/145 (1%)
Query: 32 VFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSAL 89
VF+ I D+ NS + Y+++ F T +F + + + + ++T+ V+ A AL
Sbjct: 60 VFENIDIRSDVYIWNSLVSGYSKNSMFHDTLKVFKRLLNCPICVPDSFTYPNVIKAYGAL 119
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +++K G + VV ++L+ MY+K+ L +SV+ F E+ +DV +WN ++
Sbjct: 120 GREFLGRMIHTVVVKSGHVCDVVVASSLVGMYAKFNLFEDSVQVFDEMPERDVASWNTVI 179
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
SSF + G A++A +F M R E
Sbjct: 180 SSFYQRGDAEKALELFGRMERSDFE 204
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ L + NS + Y + + L M + T T +L ACS
Sbjct: 263 EVFQQMRRKSLVAWNSMIRGYVARGDSKSCVELLNRMIIEGTRPSQTTLTSILMACSRSR 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV-TWNALL 149
GK VH +I+ D++ + +L+D+Y K G + + F + + KDVV +WN ++
Sbjct: 323 NLLHGKFVHGYVIRSVVDADIYINCSLIDLYFKCGEVKLAETVFLKTQ-KDVVESWNVMI 381
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
S ++ G +A V+ M
Sbjct: 382 SGYVSVGNWFKAVDVYDQMV 401
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 63/129 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + N+ + YT+S + T LF MH +T V C L A +GKQVH
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A IK G D + V + ++DMY K G + + AF I D V W ++S + +G +
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 160 EAFGVFQAM 168
AF VF M
Sbjct: 601 RAFHVFSQM 609
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T + A S L A E+G+Q+HA +K ++P V T+L+DMY+K G + ++ FK
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKR 678
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
IE ++ WNA+L +HG KE +F+ M
Sbjct: 679 IEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRS-----RNFPATWALFCYMHSTCLNLTAYTFTPV 82
Y +VFD++ DL S NS L +Y +S N + LF + + + T +P+
Sbjct: 92 YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C + H K G D + V AL+++Y K+G + E F+E+ ++DV
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQA 167
V WN +L ++L G +EA + A
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSA 236
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+++ + VFD +S DL S NS + ++ LF + L YT T VL
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 84 GACSALP-APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
A S+LP KQVH IK S+ V TAL+D YS+ + E+ F+ F D+
Sbjct: 424 KAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DL 482
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V WNA+++ + + + +F M ++
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L Y S + A F M + + TF +L + + G+QVH + +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G D V +L++MY K G + F + +D+++WN++++ ++GL EA +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 165 FQAMTR 170
F + R
Sbjct: 404 FMQLLR 409
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
GK HA ++ + E + L+ MYSK G L + F ++ +D+V+WN++L+++ +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 155 HGLA-----KEAFGVFQAMTRERV 173
++AF +F+ + ++ V
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVV 141
>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g52850, chloroplastic; Flags: Precursor
gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 893
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+SH + + + ++T+S+ F + +LF M ++ + +TF+ V+ +C+ L
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G +VH +IK G + VV ++L D+YSK G E+ E F ++ D ++W ++S
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
S + +EA + M + V
Sbjct: 199 SLVGARKWREALQFYSEMVKAGV 221
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 55 RNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV 112
RN A A+ F M S L +T++ +L CSA+ + + GKQ+H+ IK G +
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 113 VKTALMDMYSKYGLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
V AL+DMY K VEA F + +VV+W L+ + HG ++ FG+ M
Sbjct: 362 VGNALVDMYMKCS--ASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 170 RERVE 174
+ VE
Sbjct: 420 KREVE 424
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
YM+ + + + + A + L A E GK +H +K G V +L+DMYSK G
Sbjct: 518 YMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCG 577
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L ++ + F+EI DVV+WN L+S +G A F+ M + E
Sbjct: 578 SLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + D S + S +R + + M + +TF +LGA S L
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL- 238
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK +H+ +I G V+KT+L+D YS++ + ++V +DV W +++S
Sbjct: 239 GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 151 SFLRHGLAKEAFGVFQAM 168
F+R+ AKEA G F M
Sbjct: 299 GFVRNLRAKEAVGTFLEM 316
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T + VL ACS L R ++HA +++ D E VV +L+D Y+ + + + +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D +T+ +L++ F G + A V M
Sbjct: 489 KRRDNITYTSLVTRFNELGKHEMALSVINYM 519
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V+D+++ D ++ N + +Y R+ F + +F + + YT++ +L C +
Sbjct: 169 RVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTIS 228
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+HA ++K SE V AL+ +YSK G++ E+ F+ + +++++W A ++
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASIN 288
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
F +HG K+A F M +E
Sbjct: 289 GFYQHGDFKKALKQFSMMRESGIE 312
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++ T + +L AC+ + GK++H + G + + V++AL+DMY+K G + E+ F
Sbjct: 455 SSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILF 514
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ VTWN+L+ + HG EA +F M
Sbjct: 515 YMMPERNTVTWNSLIFGYANHGYCNEAIELFNQM 548
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y F+ L C E G++ H ++K G S+ V T+L+DMY+K G + +V + +
Sbjct: 115 YVFS-ALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDK 173
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ D T N L+S++ R+G +AF VF
Sbjct: 174 MTSLDAATCNCLISAYARNGFFVQAFQVF 202
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
T L + +L AC L G+ +H +++K +S+ + +AL+ MYSK G + +
Sbjct: 364 TSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEK 423
Query: 130 SVEAFKEIEFKDVVTWNALLSSF 152
+ F I +VV+WN L++ F
Sbjct: 424 ACRVFDWI--PNVVSWNTLIAGF 444
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 4/115 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS +F Y LF M + L TFT VL ACS E G+ + M +
Sbjct: 526 NSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKM-Q 584
Query: 105 GGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRHG 156
EP ++ ++D+ + G L E+ + K + + D W ALL + HG
Sbjct: 585 EKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 639
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + D+ LN + Y R+ N +F + + T YTFT ++ C+
Sbjct: 223 EKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGD 282
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E GKQ+ L K G SE V A++ MY G+ E+ F + K++++W AL+
Sbjct: 283 LGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALI 342
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S + R G K+A F + E
Sbjct: 343 SGYSRSGYGKKAVDAFLGLHDE 364
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
R +VFD + + + S + Y +F + +++ MH N +T T +L
Sbjct: 116 NRLDLAQKVFDRMRTRNTITWTSLIKGYLEDNDFQSAFSIAGDMHKFGENFNEHTCTVIL 175
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
ACS+ G+Q+H +IK G D V T+L+ MY+K G + + F + FKD+
Sbjct: 176 QACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKVFDSMGFKDIR 235
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
N ++ + R G +A VF+ + + E
Sbjct: 236 CLNFMILEYGRAGNGGKAIEVFKNLLNDGFE 266
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSR-NFPATWALFCYMH 68
+++A AL Y + VFD +S+ ++S N+ L + S + LF +
Sbjct: 406 VNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLR 465
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ TF+ +L + + E+G+ HA +K G D+ V +++ MY+K G +
Sbjct: 466 LAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIE 525
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
++ + F + +D ++WNAL+S++ HG A+++ +F+ M R+
Sbjct: 526 DAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRK 568
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTF 79
+PK ++F +S +L S + + Y+RS F +H +N +
Sbjct: 318 GMPKE---AERMFSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLL 374
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
T +L CS E G Q+H ++K G + V TAL+D+Y+K L + F +
Sbjct: 375 TAILDCCSDCNNLELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSN 434
Query: 140 KDVVTWNALLSSFLR 154
K + ++NA+L+ FL
Sbjct: 435 KGIASFNAILAGFLE 449
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/76 (21%), Positives = 39/76 (51%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+ VH+ ++K G+ + ++++Y K+ L + + F + ++ +TW +L+ +L
Sbjct: 86 GQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLE 145
Query: 155 HGLAKEAFGVFQAMTR 170
+ AF + M +
Sbjct: 146 DNDFQSAFSIAGDMHK 161
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y+ +VFD + D NS L ++ + LF M + + TF+ ++
Sbjct: 223 RTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIP 282
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC L + GKQ+HA +I+GG D + ++L+DMY K G + + F I+ D+V+
Sbjct: 283 ACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVS 342
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
W A++ HG A+EA +F M
Sbjct: 343 WTAMIMGHALHGPAREALVLFDRM 366
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D+ S N+ + S L M ++T + VL +
Sbjct: 128 KVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGA 187
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
RG ++H + G + V ++L+DMY+ SV+ F + +D + WN++L+
Sbjct: 188 DVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLA 247
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++G EA G+F+ M ++
Sbjct: 248 GCAQNGSVDEALGLFRRMLHSGIK 271
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY-------------GLLGE 129
L +C+AL G +HAL ++ G ++ AL+++Y K ++ E
Sbjct: 65 LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124
Query: 130 SV-EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
SV + F E+ KDVV+WN L+ G EA G+ + M R+
Sbjct: 125 SVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREMWRD 167
>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
Length = 829
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + + + N+ + + +R + +AL M L T V+ AC+ +
Sbjct: 200 EVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQ 259
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ RG+ VH ++ G +S+ V AL+++Y K G L + A + IE +D ++W LL+
Sbjct: 260 SIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKLRAARHALEGIETRDKISWTTLLA 319
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
++ RHG K A V + M E V+
Sbjct: 320 AYARHGHGKRAIAVIKRMDHEGVKL 344
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ I D S + L +Y R + A+ M + L ++TF +L +C A+
Sbjct: 301 HALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIA 360
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNALL 149
A G+++H + + G + +PV++TAL+DMY K G + AF + + +DV WNALL
Sbjct: 361 ALALGEEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALL 420
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++++ KE G+F M+ + V
Sbjct: 421 AAYVLRDQGKETLGIFARMSLQGV 444
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 1/142 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ + FD + ++ S ++ + +Y + + LF M + A TF VL AC+
Sbjct: 95 HARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDALELFVRMDHEGVKANAITFVSVLDACA 154
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVV-KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
++ A GK +H ++ G + V+ +++MY K G + + E F+ +E K+ VTWN
Sbjct: 155 SMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWN 214
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
++++ RH KEAF + M
Sbjct: 215 TMIAACSRHDRYKEAFALLGEM 236
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Query: 31 QVFDEISH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ FD +S D++ N+ L +Y T +F M + A TF +L AC++L
Sbjct: 402 RAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACASL 461
Query: 90 PAPERGKQVHALMIKGG------TDSEPVVKTALMDMYSKYGLLGESVEAF---KEIEFK 140
A G+ H+ M++ G S ++ T++++MY+K G L ++ F +
Sbjct: 462 AALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKCGSLADAKAEFAKARRARAS 521
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
DVV W+A+++++ + GL++EA F +M +E V+
Sbjct: 522 DVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVK 555
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 66/133 (49%), Gaps = 1/133 (0%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N + Y R+ + +F M + + +L A ++L +G+ H +
Sbjct: 8 SWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTV 67
Query: 103 IKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
+ G S+ VV TA++ MY++ G + + AF + ++VV+W+A+++++ + G +A
Sbjct: 68 CEASGLGSDVVVATAVLTMYNRCGSVSHARRAFDAMVVRNVVSWSAMIAAYAQRGHPGDA 127
Query: 162 FGVFQAMTRERVE 174
+F M E V+
Sbjct: 128 LELFVRMDHEGVK 140
>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
Length = 714
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F+E+ L S NS + + + LF M +N T +L AC+
Sbjct: 297 QLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 356
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + +HA + + G +++ ++ TAL+++Y+K G L S + F+EI+ +D + W A+L+
Sbjct: 357 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTAMLA 416
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ H +EA +F M +E VE
Sbjct: 417 GYAVHACGREAIKLFDLMVKEGVE 440
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSA 88
++FDE+ + DL S NS + + A FC M + + T V+ AC+
Sbjct: 194 QRLFDEMPNRDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAX 253
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A + GK +H +++K G + V +L++MY K G L + + F+E+ + +V+WN++
Sbjct: 254 MGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSM 313
Query: 149 LSSFLRHGLAKEAFGVFQAMTR 170
+ +G A++ +F M R
Sbjct: 314 VVIHNHNGYAEKGMDLFNLMKR 335
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+HA +IK S+ + L+ MY K G ++ F E+ +D+V+WN+L+S G
Sbjct: 161 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNRDLVSWNSLMSGLSGRGY 220
Query: 158 AKEAFGVFQAMTRE 171
F M E
Sbjct: 221 LGACLNAFCRMRTE 234
>gi|302756319|ref|XP_002961583.1| hypothetical protein SELMODRAFT_76916 [Selaginella moellendorffii]
gi|300170242|gb|EFJ36843.1| hypothetical protein SELMODRAFT_76916 [Selaginella moellendorffii]
Length = 493
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYT------------RSRNFPATWALFCYMHSTCLNLTAYTF 79
VFD + DL S N+ + Y+ R A + M + + L +
Sbjct: 116 VFDGMEVRDLVSWNAIVVVYSQKAQCEEAVKLYRQMLLQAALEVLEIMRAQRVELDRVGY 175
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
T V+ C++L A E G+++H+ + K G +++ V +AL++MY K G L ++ F IE
Sbjct: 176 TSVIDTCTSLGALEEGRRIHSQIAKQGLETDVAVGSALVNMYGKCGDLEDARAVFAGIEG 235
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
KD W ++L ++ +HG AF VFQ M E
Sbjct: 236 KDRCAWTSMLGAYAQHGDGDRAFQVFQTMDLE 267
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ I ++ S N + +Y R + W +F + + + TF VL +C+
Sbjct: 12 RRVFEAILDRNVFSWNLMIAAYARHGHSRDAWEVFRRIDLEGVKPSRVTFLGVLDSCNGA 71
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA-FKEIEFKDVVTWNAL 148
G ++HA M++GG +S+ V TAL++MY + + A F +E +D+V+WNA+
Sbjct: 72 RGLAAGLEIHARMVEGGFESDVVACTALLNMYGRCSGDARAARAVFDGMEVRDLVSWNAI 131
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ + + +EA +++ M
Sbjct: 132 VVVYSQKAQCEEAVKLYRQM 151
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS-ALP 90
VF I D + S L +Y + + + +F M T VL CS
Sbjct: 229 VFAGIEGKDRCAWTSMLGAYAQHGDGDRAFQVFQTMDLEGEKSDPITLISVLSVCSDKSS 288
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
A +GK +H+ + G + + +V TAL+DMY+ G L + F I+ K DVV W+A++
Sbjct: 289 ALSQGKAIHSSISGSGLELDGLVATALIDMYATCGSLRTARNFFDAIQAKGDVVLWSAII 348
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +HG +E+ +F+ M E +E
Sbjct: 349 SGYSQHGDWEESTTLFRLMQLEGLE 373
Score = 42.7 bits (99), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
MY K G + E+ F+ I ++V +WN +++++ RHG +++A+ VF+ + E V+
Sbjct: 1 MYGKCGKVDEARRVFEAILDRNVFSWNLMIAAYARHGHSRDAWEVFRRIDLEGVK 55
>gi|255562850|ref|XP_002522430.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538315|gb|EEF39922.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 556
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 82/163 (50%), Gaps = 6/163 (3%)
Query: 14 TCISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM 67
T +S+A+++ Y Q VF E++ D+ S ++ + Y++ + M
Sbjct: 350 TFLSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWSTIIAGYSQGGCAEEAFEYLSRM 409
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLL 127
T VL C + E+GKQ+HA + G + ++++AL++MYSK G +
Sbjct: 410 RREGPKPNELTLASVLSVCGNMAILEQGKQLHAHALHVGLEQTAMIQSALINMYSKCGSI 469
Query: 128 GESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E+ + F E E D+V+W A+++ + HG +EA +F+ + R
Sbjct: 470 KEASKIFDEAENNDIVSWTAMINGYAEHGCRQEAIDLFEKIPR 512
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++F++++ ++ S + +YT+S F M ++ +TF V+ C+
Sbjct: 269 YGSRLFEKMTIRNVVSWTMIITTYTQSGQEENALRAFIRMQEIGVSPNDFTFAAVISGCA 328
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E G+Q+H M+ G + V +++ +YSK G L + FKE+ +DVV+W+
Sbjct: 329 NLGKTEWGEQLHGHMLCLGLMTFLSVANSVITLYSKCGQLKSASMVFKELTRRDVVSWST 388
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
+++ + + G A+EAF M RE
Sbjct: 389 IIAGYSQGGCAEEAFEYLSRMRRE 412
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACSAL 89
Q+FDE+ H D S + + Y + + LF M L + + + L C
Sbjct: 69 QMFDEMPHRDEISWTTIISGYVNAIDTTEALTLFSKMWVVPGLRMDPFILSLALKICGLS 128
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K V +AL+DMY K+ + + + F + ++VV+W A++
Sbjct: 129 LNESYGESLHGYSVKSDFVDSVFVGSALVDMYMKFDKIQQGCQIFHAMPIRNVVSWTAII 188
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F+ G +KE F M R +V
Sbjct: 189 TGFVHAGYSKEGLVYFSQMWRSKV 212
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
+YTF L AC+ L A + G+Q+H +K ++ V L MY+K G L F+
Sbjct: 216 SYTFAIALKACANLGALDHGRQIHCQALKRSLEASSFVANTLATMYNKCGKLDYGSRLFE 275
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ ++VV+W +++++ + G + A F M
Sbjct: 276 KMTIRNVVSWTMIITTYTQSGQEENALRAFIRM 308
>gi|302764012|ref|XP_002965427.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
gi|300166241|gb|EFJ32847.1| hypothetical protein SELMODRAFT_84339 [Selaginella moellendorffii]
Length = 495
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + QVFD I D+ + ++ + +Y + + LF YM+ + +LG
Sbjct: 126 RLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILG 185
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS+ A GK H L++ G ++ L+ MY K G L + F +E +D+++
Sbjct: 186 ACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLIS 245
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
W+A+L+ HG K+AF F+ M E V+
Sbjct: 246 WSAMLAVIAEHGHCKDAFVHFRRMDLEGVK 275
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F+ ++H ++ S ++ + +Y + + LF M + TF VL AC+
Sbjct: 31 EFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAE 90
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+G+ +H L + D +V TAL+ MY K L E+ + F I KDVVTW+ ++S
Sbjct: 91 AVEQGEMIHRLAARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMIS 150
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ + G +EA +F M + V
Sbjct: 151 AYAQLGHVREAIQLFGYMNLDGV 173
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + DL S ++ L + + F M + TF +L ACS L A
Sbjct: 234 VFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGA 293
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G +H + G S ++ +L+DMY K G L + F + ++V+TW ++++
Sbjct: 294 LVEGNVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAARGIFDRMSHRNVITWTTMITA 353
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++H KEA +F+ M + V+
Sbjct: 354 CVQHEQGKEALELFEEMEKAGVQ 376
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%)
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
V +L++MY K G + E+ E F+ + ++V++W+ +++++ + G +A +FQ M E
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 173 VE 174
VE
Sbjct: 72 VE 73
>gi|414879964|tpg|DAA57095.1| TPA: hypothetical protein ZEAMMB73_812209 [Zea mays]
Length = 554
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 75/167 (44%), Gaps = 12/167 (7%)
Query: 17 SIADALPKRYVYTHQVFDEI--------SHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
S+ +AL Y HQV D + DL S NS L ++ S + T LF M
Sbjct: 238 SVCNALIDLYGKCHQVHDATMVFEGLPDTDKDLFSWNSMLSAHQYSADHAGTMCLFARMR 297
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK----TALMDMYSKY 124
T L + T VL AC+ A + G+ VH ++ G + + AL DMY+K
Sbjct: 298 RTTLLPDSVTVAAVLPACAQTAALKVGRVVHGYIVTSGLACDGALDVFACNALADMYTKS 357
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G L E+ F +DV +WN ++ + HG +EA +F M E
Sbjct: 358 GGLDEARCVFDWTRLRDVASWNIMIDGYASHGRGREALMLFHQMIEE 404
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGAC 86
+ H++FDE+ H D+ NS + + + F F M + ++++T T +L C
Sbjct: 153 HAHRLFDELRHRDVVVWNSMVNGFVKLGCFDRATECFRKMREEGEVEISSFTVTGILSVC 212
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVT 144
+A G VH L ++ G D E V AL+D+Y K + ++ F+ + KD+ +
Sbjct: 213 TATADLGSGAAVHGLSVRSGFDKEASVCNALIDLYGKCHQVHDATMVFEGLPDTDKDLFS 272
Query: 145 WNALLSS 151
WN++LS+
Sbjct: 273 WNSMLSA 279
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A++F P+ S+ P+ +HAL ++ G + +AL+ ++GL + F
Sbjct: 103 AFSFPPLF---SSAPSSPHLLALHALALRFGLAHDLFCASALLRGCLRFGLADHAHRLFD 159
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E+ +DVV WN++++ F++ G A F+ M E
Sbjct: 160 ELRHRDVVVWNSMVNGFVKLGCFDRATECFRKMREE 195
>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
Length = 782
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F ++ D+ + +Y ++ LF M T+ T VL C+ L
Sbjct: 364 KIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLA 423
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A ++G+Q+H+ +I+ G E VV+TAL++MY K G + E+ F+++ +D++ WN++L
Sbjct: 424 ALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLG 483
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ +HG E +F M
Sbjct: 484 AYAQHGYYDETLQLFNQM 501
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+++ D+ + N + Y ++ NF LF + + TF +L ++L
Sbjct: 263 RLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLT 322
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +GK +H L+ + G D + VV TALM +Y + G++ + F ++ KDV+TW +
Sbjct: 323 SLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQAWKIFVDMGSKDVITWTVMCV 382
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ ++G KEA +FQ M E
Sbjct: 383 AYAQNGFRKEALQLFQEMQLE 403
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 71/126 (56%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVF+ + D+ + + Y + ++ +F M + T T+ +L AC++
Sbjct: 60 QQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACAST 119
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ + G ++H +++ G + + V TAL++MY+K G + + ++FK +E +DVV+W A++
Sbjct: 120 ESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWTAMI 179
Query: 150 SSFLRH 155
++ ++H
Sbjct: 180 AACVQH 185
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F +L CS+ + G++VH + G + +V L+ MY++ G + E+ + F+ +E
Sbjct: 8 FVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQVFEILE 67
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
KDV W ++ + + G A G+F M E V
Sbjct: 68 RKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDV 102
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 67/142 (47%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F + H D+ S + + + + F L+ M + T V A
Sbjct: 164 FKRLEHRDVVSWTAMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYL 223
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GK +++L+ +S+ V + M+M+ GLLG++ F+++ +DVVTWN +++ +
Sbjct: 224 SEGKFIYSLVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFY 283
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+++ EA +F + ++ ++
Sbjct: 284 VQNENFGEAVRLFGRLQQDGIK 305
>gi|383167277|gb|AFG66680.1| Pinus taeda anonymous locus 0_14992_02 genomic sequence
gi|383167278|gb|AFG66681.1| Pinus taeda anonymous locus 0_14992_02 genomic sequence
gi|383167279|gb|AFG66682.1| Pinus taeda anonymous locus 0_14992_02 genomic sequence
gi|383167280|gb|AFG66683.1| Pinus taeda anonymous locus 0_14992_02 genomic sequence
Length = 150
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 72/135 (53%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ N+ + +Y ++ LF M + + +TF VL C L E+GK++H
Sbjct: 1 DVVLWNAMITAYAKNEPVEEALKLFHEMKLSGIRADHFTFASVLPVCGNLGNLEQGKEIH 60
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+ + G S+ V +AL+DMY K G + ++ + F ++ +DV++WN+++ + HG +
Sbjct: 61 HEINRSGYQSDVYVGSALVDMYVKCGSVEDARQVFDKMPRRDVISWNSMIGGYATHGPPE 120
Query: 160 EAFGVFQAMTRERVE 174
EA +F+ M E E
Sbjct: 121 EALRLFRRMKDEAAE 135
>gi|125548358|gb|EAY94180.1| hypothetical protein OsI_15952 [Oryza sativa Indica Group]
Length = 655
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 60/93 (64%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T + V+ C++L + GK VH IK G + + +V ++L+ MYSK GL+ E+ + F+ I
Sbjct: 377 TLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELI 436
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+D VTWNA+++++ HGLA EA VF MT+
Sbjct: 437 LQRDTVTWNAMIATYAYHGLADEALKVFDMMTK 469
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 108 DSEPVVKT----ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
D+ PV + AL+ Y++ G + E+ E F I ++VV+WNA++S + R+G+ K A
Sbjct: 89 DAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARE 148
Query: 164 VFQAM 168
+F M
Sbjct: 149 LFDMM 153
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 28/131 (21%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL--PAPERGKQVHALMIKG 105
LF ++RN P +W + +T Y +G L PE+
Sbjct: 211 LFGQMQTRN-PVSWNVM---------ITGYARAGSMGIAQRLFDEMPEK----------- 249
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ + +TA+M Y + G + + + FK++ +D V WN ++ F+R+ +A +F
Sbjct: 250 ----DVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLF 305
Query: 166 QAM-TRERVEF 175
M R+++ +
Sbjct: 306 SEMPDRDQISW 316
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 72/140 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ N+ + Y F ++ YM + + YTF VL AC A+
Sbjct: 62 KVFDCLPDRDVFVWNTIIQGYANLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMK 121
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++G+ +H ++K G D + V AL+ Y+K +G S F I KD+VTWN+++S
Sbjct: 122 DGKKGQAIHGHVVKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMIS 181
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ +G A +A +F M +
Sbjct: 182 GYAINGCADDALVLFHNMLQ 201
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 4/144 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTAYTFTPVLG 84
+ +VFD IS D+ + NS + Y + LF M T + T +L
Sbjct: 161 SRRVFDMISEKDIVTWNSMISGYAINGCADDALVLFHNMLQVQGDTVYAPDSATLVAILP 220
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ A + G +H+ +IK G + + + + L+ MY+ GLL + + F I+ K++V
Sbjct: 221 ACAQAAAIQEGLWIHSYVIKSGIELDAALGSGLIAMYANCGLLNSARDVFDRIDDKNIVV 280
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WNA++ + HG A EA +F +
Sbjct: 281 WNAIIRCYGMHGHADEALKMFSGL 304
>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
Length = 1027
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL ACS + A GK++H L+ K G S +AL+DMYSK G + S EAFKE+
Sbjct: 733 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 792
Query: 138 EFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ K D++ WN+++ F ++G A EA +FQ M +++
Sbjct: 793 KNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIK 830
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD ++ N+ L + ++ +F YM L +TF +LGAC+ L
Sbjct: 381 NVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS 440
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQVH + IK D V A +DMYSKYG +G++ F I +KD ++WNAL
Sbjct: 441 SFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTV 500
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ +EA + + M
Sbjct: 501 GLAQNLEEEEAVCMLKRM 518
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 60/97 (61%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+F+ + ACS + A E GKQ+H L IK G S V ++L+D+YSK+G + S + F ++
Sbjct: 529 SFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 588
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +V NAL++ F+++ EA +FQ + ++ ++
Sbjct: 589 DASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLK 625
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L+ M S L T TF +L A + + A G+Q+HA + G D+ V ++L+++Y
Sbjct: 311 GLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLY 370
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+K G ++ F K++V WNA+L+ F+++ L +EA +FQ M R
Sbjct: 371 AKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ VL ACS + G+QVH ++K G S + AL+DMY+K G + + F
Sbjct: 159 FGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDG 218
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I D + W+++++ + R G +EA +F M +
Sbjct: 219 IACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++F ++ + +N+ + + ++ N LF + L ++ TF+ +L CS
Sbjct: 581 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSG 640
Query: 89 LPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWN 146
GKQVH +K G + ++ +L +Y K +L ++ + E+ + K++ W
Sbjct: 641 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 700
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++S + ++G + F M
Sbjct: 701 AIISGYAQNGYGDHSLVSFWRM 722
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C ++ +P Y +FD+I + NS + Y N P+ ALF Y+
Sbjct: 67 CYAVCGHMP----YAQHIFDQIVLKNSFLWNSMIRGYA-CNNSPSR-ALFLYLKMLHFGQ 120
Query: 75 TAYTFT-P-VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
FT P VL AC L E G++VHAL++ GG + + V +++ MY K+G + +
Sbjct: 121 KPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARV 180
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + +D+ +WN ++S F+++G A+ AF VF M R+
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRD 219
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 67/141 (47%), Gaps = 3/141 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + DL+S N+ + + ++ + +F M T +L AC +
Sbjct: 181 VFDRMLVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMD 240
Query: 92 PERGKQVHALMIKGGTDSEPV---VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ GK++H +++ G + +++DMY + + + F+ + KDVV+WN+L
Sbjct: 241 LKVGKEIHGYVVRNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSL 300
Query: 149 LSSFLRHGLAKEAFGVFQAMT 169
+S + + G A +A +F M
Sbjct: 301 ISGYEKCGDAFQALELFGRMV 321
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++F+ + D+ S NS + Y + + LF M T VL AC+ +
Sbjct: 283 RKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQI 342
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A G V + ++K G VV TAL+ MY+ G L + F E+ K++ ++
Sbjct: 343 SALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVFDEMPEKNLPACTVMV 402
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ F HG +EA +F M
Sbjct: 403 TGFGIHGRGREAISIFYEM 421
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ +L + + + ++F M + FT VL ACS
Sbjct: 385 RVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSG 444
Query: 91 APERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
+ GK++ M + + P + L+D+ + G L E+ + ++ K + W AL
Sbjct: 445 LVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTAL 504
Query: 149 LSSFLRH 155
LS+ H
Sbjct: 505 LSACRLH 511
>gi|116310106|emb|CAH67125.1| H0315E07.3 [Oryza sativa Indica Group]
gi|222628896|gb|EEE61028.1| hypothetical protein OsJ_14863 [Oryza sativa Japonica Group]
Length = 655
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 60/93 (64%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T + V+ C++L + GK VH IK G + + +V ++L+ MYSK GL+ E+ + F+ I
Sbjct: 377 TLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELI 436
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+D VTWNA+++++ HGLA EA VF MT+
Sbjct: 437 LQRDTVTWNAMIATYAYHGLADEALKVFDMMTK 469
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 108 DSEPVVKT----ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
D+ PV + AL+ Y++ G + E+ E F I ++VV+WNA++S + R+G+ K A
Sbjct: 89 DAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARE 148
Query: 164 VFQAM 168
+F M
Sbjct: 149 LFDMM 153
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 28/131 (21%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL--PAPERGKQVHALMIKG 105
LF ++RN P +W + +T Y +G L PE+
Sbjct: 211 LFGQMQTRN-PVSWNVM---------ITGYARAGSMGIAQRLFDEMPEK----------- 249
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ + +TA+M Y + G + + + FK++ +D V WN ++ F+R+ +A +F
Sbjct: 250 ----DVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLF 305
Query: 166 QAM-TRERVEF 175
M R+++ +
Sbjct: 306 SEMPDRDQISW 316
>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
Length = 1027
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL ACS + A GK++H L+ K G S +AL+DMYSK G + S EAFKE+
Sbjct: 733 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 792
Query: 138 EFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ K D++ WN+++ F ++G A EA +FQ M +++
Sbjct: 793 KNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIK 830
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD ++ N+ L + ++ +F YM L +TF +LGAC+ L
Sbjct: 381 NVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS 440
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQVH + IK D V A +DMYSKYG +G++ F I +KD ++WNAL
Sbjct: 441 SFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTV 500
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ +EA + + M
Sbjct: 501 GLAQNLEEEEAVCMLKRM 518
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 60/97 (61%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+F+ + ACS + A E GKQ+H L IK G S V ++L+D+YSK+G + S + F ++
Sbjct: 529 SFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 588
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +V NAL++ F+++ EA +FQ + ++ ++
Sbjct: 589 DASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLK 625
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L+ M S L T TF +L A + + A G+Q+HA + G D+ V ++L+++Y
Sbjct: 311 GLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLY 370
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+K G ++ F K++V WNA+L+ F+++ L +EA +FQ M R
Sbjct: 371 AKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 419
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ VL ACS + G+QVH ++K G S + AL+DMY+K G + + F
Sbjct: 159 FGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDG 218
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I D + W+++++ + R G +EA +F M +
Sbjct: 219 IACPDTICWSSMIACYHRVGCYQEALALFSRMDK 252
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++F ++ + +N+ + + ++ N LF + L ++ TF+ +L CS
Sbjct: 581 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSG 640
Query: 89 LPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWN 146
GKQVH +K G + ++ +L +Y K +L ++ + E+ + K++ W
Sbjct: 641 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 700
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++S + ++G + F M
Sbjct: 701 AIISGYAQNGYGDHSLVSFWRM 722
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
S + F + +S+ L + T +VFD + D+ S S + Y R
Sbjct: 89 SGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVREGKSGIAIE 148
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + +T + V+ ACS + GK H ++++ G DS PV+ ++L+DMY
Sbjct: 149 LFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFDSNPVILSSLIDMYG 208
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ + ++ + F E+ D V W ++S+F R+ L +EA G F
Sbjct: 209 RNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFF 251
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++FD +S+ + S ++ L Y + ++ LF M L Y+F V+ AC+
Sbjct: 318 SQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVDL----YSFGTVIRACAG 373
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A GK++H I+ G + +V++AL+D+Y+K G + + F + ++++TWN++
Sbjct: 374 LAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITWNSM 433
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F ++G + A +F+AM +E ++
Sbjct: 434 IHGFAQNGSSGIAIQIFEAMIKEGIK 459
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGACSAL 89
Q+FDE+ D + + ++TR+ + F H L YTF VL AC L
Sbjct: 218 QLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNL 277
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+G+++HA +I G V +++L+DMY K G + +S F + ++ V+W+ALL
Sbjct: 278 GRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALL 337
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + +G ++A +F+ M
Sbjct: 338 AVYCHNGDYEKAVNLFREM 356
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG---LLGESVEAFK 135
+ +L C + + RG+Q HA ++K G +++ V +L+ +Y K G LL V F
Sbjct: 63 YASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRV--FD 120
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ KDVV+W ++++ ++R G + A +F M +E
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIE 159
>gi|302775606|ref|XP_002971220.1| hypothetical protein SELMODRAFT_95215 [Selaginella moellendorffii]
gi|300161202|gb|EFJ27818.1| hypothetical protein SELMODRAFT_95215 [Selaginella moellendorffii]
Length = 492
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-----------HSTCLNLTAYTFT 80
VFD + DL S N+ + Y++ L+ M S+ + L +T
Sbjct: 116 VFDGMEVRDLVSWNAIVVVYSQKAQCEEAVKLYRQMLLQGVQPDEFVFSSRVKLDRVGYT 175
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
V+ C++L A E G+++H+ + K G +++ V +AL++MY K G L ++ F IE K
Sbjct: 176 SVIDTCTSLGALEEGRRIHSQIAKQGLETDVAVGSALVNMYGKCGDLEDARAVFAGIEGK 235
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
D W ++L ++ +HG AF VFQ M E
Sbjct: 236 DRCAWTSMLGAYAQHGDGDRAFQVFQTMDLE 266
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 76/146 (52%), Gaps = 1/146 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF+ I ++ S N + +Y R + W +F + + + TF VL +CS
Sbjct: 12 RRVFEAILDRNVFSWNLMIAAYARHGHSRDAWEVFRRIDLEGVKPSRVTFLGVLDSCSGA 71
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA-FKEIEFKDVVTWNAL 148
G ++HA M++GG +S+ V TAL++MY + + A F +E +D+V+WNA+
Sbjct: 72 RGLAAGLEIHARMVEGGFESDVVACTALLNMYGRCSGDARAARAVFDGMEVRDLVSWNAI 131
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + + +EA +++ M + V+
Sbjct: 132 VVVYSQKAQCEEAVKLYRQMLLQGVQ 157
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS-ALP 90
VF I D + S L +Y + + + +F M T VL CS
Sbjct: 228 VFAGIEGKDRCAWTSMLGAYAQHGDGDRAFQVFQTMDLEGEKSDPITLISVLSVCSDKSS 287
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
A +GK +H+ + G + + +V TAL+DMY+ G L + + F I+ K DVV W+A++
Sbjct: 288 ALSQGKAIHSSISGSGLELDGLVATALIDMYATCGSLRTARDFFDAIQAKGDVVLWSAII 347
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
S + +HG +E+ +F+ M E +E
Sbjct: 348 SGYSQHGDWEESTTLFRLMQLEGLE 372
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 36/55 (65%)
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
MY K G + E+ F+ I ++V +WN +++++ RHG +++A+ VF+ + E V+
Sbjct: 1 MYGKCGKVDEARRVFEAILDRNVFSWNLMIAAYARHGHSRDAWEVFRRIDLEGVK 55
>gi|255546193|ref|XP_002514156.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546612|gb|EEF48110.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 885
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 6/164 (3%)
Query: 17 SIADALPKRYVYTH------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
S+ +AL Y+ + +VFD +++ DL S N+ L + +FC M
Sbjct: 432 SVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLSGFYDFETSDQGLRIFCQMLME 491
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
L YTF VL +CS+L GKQVHA +IK D V TAL+DMY+K L ++
Sbjct: 492 GLVPNLYTFVGVLRSCSSLLNVWFGKQVHAHIIKNSLDGNDFVGTALIDMYAKNRCLEDA 551
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
AF ++ +D+ TW +++ + A++A M RE ++
Sbjct: 552 DVAFNKLTNRDLFTWTVIIAGHSQTDKAEKAVKYLGQMLREGIK 595
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 69/131 (52%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S N+ L Y + + LFC M +N T YT + VL C+ GK +H+L
Sbjct: 262 SWNALLNGYAQRGDGKNVLKLFCRMLECEMNFTNYTLSTVLKGCANSGNLREGKALHSLS 321
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
I+ + + + L+DMYSK G+ E+++ F IE D+V W+A+++ + G ++EA
Sbjct: 322 IRRAYELDEFLGCNLVDMYSKCGMAYEALKVFNMIEEPDIVAWSAIITGLDQQGHSQEAA 381
Query: 163 GVFQAMTRERV 173
+F M ++ V
Sbjct: 382 ELFHLMRQKGV 392
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T L CS + G+Q+H+L IK G + V +AL+DMY K G + ++ FK
Sbjct: 599 FTLASCLSGCSRMATLGNGQQLHSLAIKSGHSGDVFVSSALVDMYGKCGCMEDAEAIFKG 658
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +D V WN ++ + +HG ++A F+ M E ++
Sbjct: 659 LFSRDTVAWNTIICGYSQHGQGQKALEAFRMMLDEDID 696
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I D+ + ++ + + + LF M + ++F V+ A + +
Sbjct: 351 KVFNMIEEPDIVAWSAIITGLDQQGHSQEAAELFHLMRQKGVRPNQFSFASVISAATNVG 410
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+ +H + K G +S+ V AL+ MY K G + + + F + +D+V+WNALLS
Sbjct: 411 DLYLGQSIHCCICKYGYESDNSVGNALITMYMKSGFVQDGIRVFDTMTNRDLVSWNALLS 470
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F + + +F M E
Sbjct: 471 GFYDFETSDQGLRIFCQMLME 491
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
+C M + +T VL A S + GK +H IK G + V +AL+D+Y+K
Sbjct: 182 YCEMRKENICPNEFTLATVLKASSMCSDIKFGKLIHLEAIKTGLLLDLFVGSALVDLYAK 241
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+G + + F + K+ V+WNALL+ + + G K +F M + F
Sbjct: 242 FGEMELADRVFFGMPEKNNVSWNALLNGYAQRGDGKNVLKLFCRMLECEMNF 293
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 49/95 (51%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
++ +L C++ G +H +IK G + + + +L+++Y+K G L + + +
Sbjct: 96 YSGMLRECASKGNLNEGTAIHGNVIKSGLEPDSHLWVSLINLYAKCGSLAFARKVLVGMR 155
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+DVV+W AL++ ++ G + + M +E +
Sbjct: 156 ERDVVSWTALIAGYVSEGCGSDGVKAYCEMRKENI 190
>gi|302817788|ref|XP_002990569.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
gi|300141737|gb|EFJ08446.1| hypothetical protein SELMODRAFT_131810 [Selaginella moellendorffii]
Length = 564
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD I ++ N + +Y ++ +F L+ M+ L TF VL AC+
Sbjct: 115 KIFDRIPVKNVVCWNVMIAAYAQNGHFSEALELYYDMN---LKPDRVTFLNVLHACTL-- 169
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+ +H ++ G + + V AL++M+ K G L ++ F I F+DV++WNAL+S
Sbjct: 170 --ESGRLIHQDVVSAGLERDKFVGNALVNMFGKCGSLSDAKRVFDRIAFRDVISWNALMS 227
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+++ G KEAF +F+ M +
Sbjct: 228 VYIQQGHRKEAFELFKRMDK 247
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 3/147 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACSALP 90
VF+ I S N L +Y + + LF M + TF ACS +
Sbjct: 14 VFNSIKRSSCFSWNLMLGAYCNNGSGDQALELFKQMVDVHGIRADRVTFVTAATACSLVG 73
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E GKQ H+ ++ G +S ++ +ALM+MY + G E+ + F I K+VV WN +++
Sbjct: 74 SLEEGKQFHSRFVESGLESSLILDSALMNMYGRCGSAEEARKIFDRIPVKNVVCWNVMIA 133
Query: 151 SFLRHGLAKEAFGVFQAMTR--ERVEF 175
++ ++G EA ++ M +RV F
Sbjct: 134 AYAQNGHFSEALELYYDMNLKPDRVTF 160
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 78/159 (49%), Gaps = 12/159 (7%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S++DA +VFD I+ D+ S N+ + Y + + + LF M L
Sbjct: 201 CGSLSDA--------KRVFDRIAFRDVISWNALMSVYIQQGHRKEAFELFKRMDKAGLQP 252
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T+ +L ACS+L E+ +++H + G + + V L+ Y+K+ L +SV F
Sbjct: 253 NSVTYLSLLPACSSL---EQLREIHQELADQGLEQDEQVGNTLITAYNKFSL-EDSVAVF 308
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ ++ + VV+W ++ + HG A +++ M E V
Sbjct: 309 ERMKRRSVVSWTCMIMGMVEHGYGGRALDLYREMVVEGV 347
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 51/93 (54%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A L AC+++ G+++H L+ ++ V TA+++MY K G E+ F+
Sbjct: 351 AVALVCALDACTSVENLAEGRKIHRLVEGTTMVTDVFVATAVVNMYGKCGKFAEAEAVFQ 410
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ V TWN+L+ ++ +HG A +A +++ M
Sbjct: 411 GMKTTTVATWNSLIGAYAQHGHATDALKLYERM 443
>gi|255551609|ref|XP_002516850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543938|gb|EEF45464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + ++ S S + Y R+ F M S C +TF VL ACS+L
Sbjct: 291 MFQSLPEKNIVSWTSMITGYARNGYGEEALRFFVAMASNCFLPDDFTFGAVLHACSSLAV 350
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+ VH I+ G + V L++MY+K G L S+ AF +I KD+V++NALL +
Sbjct: 351 LGHGRMVHGCAIRNGFSTYLYVGNGLVNMYAKCGDLDGSILAFHDICAKDLVSFNALLFA 410
Query: 152 FLRHGLAKEAFGVFQAM 168
F HG A EA +++ M
Sbjct: 411 FGLHGKASEALQLYEDM 427
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V+ ++FDE+ + D + NS + SY++ ++F M +T +TFT L AC
Sbjct: 22 VHARKLFDEMPNRDTVAWNSMITSYSQLGFHQEALSIFYQMRNTNTKPDHFTFTATLSAC 81
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + G ++HAL+I G S V +L+DMY K + + FKE+ + V+W
Sbjct: 82 AGAGSFPFGTKIHALVIILGYHSSLPVNNSLIDMYGKCFDAFSAGQVFKEMGDINEVSWC 141
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
+LL ++ G EA +F M R+
Sbjct: 142 SLLFAYTNSGRFSEASEIFNLMPRK 166
Score = 59.7 bits (143), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS--------------RNFPATWA-------------- 62
QVF E+ + S S LF+YT S R F W
Sbjct: 127 QVFKEMGDINEVSWCSLLFAYTNSGRFSEASEIFNLMPRKFEIAWNTMIAGLGRYGEIEL 186
Query: 63 ---LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
+F M + L +T++ ++ AC+ G +H L+I+ G S K +++
Sbjct: 187 CLDMFREMRESLLEPDQWTYSALISACTESLEFLSGCMLHGLVIRSGWSSAMEAKNSILS 246
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+Y+K+G L ++++ + V+WNA++ ++++ G EA+ +FQ++ + +
Sbjct: 247 LYAKFGSLNDALKVVESTGRLTQVSWNAIIDAYMKVGYVNEAYLMFQSLPEKNI 300
>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
Length = 1037
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL ACS + A GK++H L+ K G S +AL+DMYSK G + S EAFKE+
Sbjct: 743 TFASVLKACSDVTAFADGKEIHGLITKSGFGSYETATSALIDMYSKCGDVISSFEAFKEL 802
Query: 138 EFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ K D++ WN+++ F ++G A EA +FQ M +++
Sbjct: 803 KNKQDIMPWNSMIVGFAKNGYADEALLLFQKMEELQIK 840
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 69/138 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD ++ N+ L + ++ +F YM L +TF +LGAC+ L
Sbjct: 391 NVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLS 450
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GKQVH + IK D V A +DMYSKYG +G++ F I +KD ++WNAL
Sbjct: 451 SFYLGKQVHCVTIKNCMDISLFVANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTV 510
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ +EA + + M
Sbjct: 511 GLAQNLEEEEAVCMLKRM 528
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 60/97 (61%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+F+ + ACS + A E GKQ+H L IK G S V ++L+D+YSK+G + S + F ++
Sbjct: 539 SFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQV 598
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +V NAL++ F+++ EA +FQ + ++ ++
Sbjct: 599 DASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLK 635
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 61/109 (55%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L+ M S L T TF +L A + + A G+Q+HA + G D+ V ++L+++Y
Sbjct: 321 GLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMHGLDANVFVGSSLINLY 380
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+K G ++ F K++V WNA+L+ F+++ L +EA +FQ M R
Sbjct: 381 AKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMFQYMMR 429
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL ACS + G+QVH ++K G S + AL+DMY+K G + + F I D
Sbjct: 174 VLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNARRVFDGIACPD 233
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ W+++++ + R G +EA +F M +
Sbjct: 234 TICWSSMIACYHRVGCYQEALALFSRMDK 262
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 2/142 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ ++F ++ + +N+ + + ++ N LF + L ++ TF+ +L CS
Sbjct: 591 SRKIFAQVDASSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCSG 650
Query: 89 LPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWN 146
GKQVH +K G + ++ +L +Y K +L ++ + E+ + K++ W
Sbjct: 651 SLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFEWT 710
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
A++S + ++G + F M
Sbjct: 711 AIISGYAQNGYGDHSLVSFWRM 732
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++ D + S N+ + ++ + F M +N +T+ VL C+ L
Sbjct: 540 KIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLA 599
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GKQ+HA +IK S+ + + L+DMYSK G + +S F++ +D VTWNA+L
Sbjct: 600 TVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLC 659
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HGL +EA +F++M
Sbjct: 660 GYAHHGLGEEALKLFESM 677
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 2/151 (1%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTPVL 83
R +V + L S N+ + Y RS R F A + F + T L T + L
Sbjct: 332 RMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKS-FQLLLKTGLGFDEITLSGAL 390
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
AC+++ G+QVH L +K + S V A++DMY K L E+ + F +E +D V
Sbjct: 391 NACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAV 450
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+WNA++++ ++G +E F +M R+E
Sbjct: 451 SWNAIIAACEQNGNEEETLAHFASMIHSRME 481
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 70/136 (51%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F E+ D+ S NS + + ++ + +F M + + VL AC AL
Sbjct: 138 FYEMPERDVVSWNSVISGFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEEC 197
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G QVH L++K G D + V +AL+ MY+K L +S+ F E+ K+ V+W+A+++
Sbjct: 198 DMGVQVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGC 257
Query: 153 LRHGLAKEAFGVFQAM 168
+++ E +F+ M
Sbjct: 258 VQNDRNVEGLELFKEM 273
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
I M+N I K +FD + D S N+ + + ++ N T A F
Sbjct: 413 ISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHF 472
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M + + +T+ VL AC+ A G ++H +IK G + V AL+DMY K
Sbjct: 473 ASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKC 532
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
G++ ++ + E K +V+WNA++S F +++A F M
Sbjct: 533 GMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRM 576
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 71/152 (46%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR + VF E+ + S ++ + ++ LF M + ++ + +
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+C+AL A GK++H+ +K S+ +V TA +DMY+K G + ++ + + +
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
++NA++ + R +A FQ + + + F
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGF 381
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY---------------- 121
TF+ + CS + GKQ HA MI G + V LM MY
Sbjct: 51 TFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKCLYLDYACKVFDKM 110
Query: 122 ------------SKYGLLGE---SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
S Y GE + + F E+ +DVV+WN+++S FL++G +++ VF
Sbjct: 111 YLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFL 170
Query: 167 AMTRERVEF 175
M R V F
Sbjct: 171 EMGRCGVGF 179
>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g49142-like [Cucumis sativus]
Length = 678
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H +F+ ++ +L S N + Y + +LF M + A T +L AC
Sbjct: 258 YIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACG 317
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A G+++H + KG +++ AL+DMY+K G L E+ + F ++ +DVV+W +
Sbjct: 318 DLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRLRDVVSWTS 377
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S++ R G +A +F M
Sbjct: 378 MMSAYGRSGQGYDAVALFAKM 398
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD ++ N + SY + + ++F M S N YTF VL ACS L
Sbjct: 93 IFDRSLEKNVVFFNVMIRSYVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDN 152
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G QVH ++K G D+ + AL+ MY K G L E+ + ++ ++DVV+WN++++
Sbjct: 153 LRVGLQVHDAIVKVGLDTNLFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAG 212
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + G +A + + M
Sbjct: 213 YAQSGQFDDALEICKEM 229
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 10/131 (7%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VFD++ D+ S S + +Y RS ALF M + N + F VL ACS
Sbjct: 362 DVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTG 421
Query: 91 APERGKQVHALMIKGGTDSEPVVK-----TALMDMYSKYGLLGESVEAFKEIEFK-DVVT 144
++G+ +M T+ +V ++D++ + G + E+ K++ + +
Sbjct: 422 LLDQGRHYFRMM----TEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERV 477
Query: 145 WNALLSSFLRH 155
W ALLS+ H
Sbjct: 478 WGALLSACRVH 488
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 78/146 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y ++VF+E S ++ + S + + ++ + LF M L + + +L AC+
Sbjct: 459 YANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACA 518
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+L A E+GKQVHA +IK ++ AL+ Y+K G + ++ AF + K VV+W+A
Sbjct: 519 SLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSA 578
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++ +HG K A VF+ M ER+
Sbjct: 579 MIGGLAQHGHGKRALDVFRRMVDERI 604
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFDE + + S N + ++ ++ LF M + + + F+ V+ AC+
Sbjct: 156 RVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGS 215
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G++VHA++++ G D + AL+DMYSK G + + F ++ DVV+WNA +
Sbjct: 216 RDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFI 275
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S + HG + A + M
Sbjct: 276 SGCVLHGHDQHALELLLQM 294
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 2/142 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF ++ D+ S N+ + + L M S+ L +T + +L AC+ A
Sbjct: 259 VFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGA 318
Query: 92 PERG--KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+Q+H MIK DS+ + AL+DMY+KYGLL ++ + F+ I KD++ WNAL+
Sbjct: 319 GAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALI 378
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S G E+ +F M +E
Sbjct: 379 SGCSHGGCHGESLSLFCRMRKE 400
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE S +S + +Y+ + A F M + + + P++ C+ P
Sbjct: 58 RVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFAL-PIVLKCA--P 114
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE-IEFKDVVTWNALL 149
G QVHA+ + G + V AL+ MY +G + E+ F E ++ V+WN ++
Sbjct: 115 DAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMM 174
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
S+F+++ +A +F M
Sbjct: 175 SAFVKNDRCSDAVELFGEMV 194
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I DL N+ + + + +LFC M ++ T VL + ++L
Sbjct: 361 KVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLE 420
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A QVHAL K G S+ V L+D Y K L + + F+E +++ + ++++
Sbjct: 421 AISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMIT 480
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + ++A +F M R+ +E
Sbjct: 481 ALSQCDHGEDAIKLFMEMLRKGLE 504
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+ +P+L +A + G +HA ++K G + L+ YSK L G + F E
Sbjct: 6 SISPLLTRYAATQSLFLGAHIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFDET 63
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
V+W++L++++ + L +EA F+AM
Sbjct: 64 PDPCHVSWSSLVTAYSNNALPREALAAFRAM 94
>gi|302788478|ref|XP_002976008.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
gi|300156284|gb|EFJ22913.1| hypothetical protein SELMODRAFT_104228 [Selaginella moellendorffii]
Length = 495
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 74/150 (49%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + QVFD I D+ + ++ + +Y + + LF YM+ + +LG
Sbjct: 126 RLIEARQVFDGIVEKDVVTWSTMISAYAQLGHVREAIQLFGYMNLDGVRPNEIILMSILG 185
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
ACS+ A GK H L++ G ++ L+ MY K G L + F +E +D+++
Sbjct: 186 ACSSAGALAEGKMTHELVVICGFGADVSTGNTLIKMYGKCGDLASAKAVFGGMERRDLIS 245
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
W+A+L+ HG K+AF F+ M E V+
Sbjct: 246 WSAMLAVIAEHGHCKDAFVHFRRMDLEGVK 275
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ F+ ++H ++ S ++ + +Y + + LF M + TF VL AC+
Sbjct: 31 EFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEGVEPNEVTFLSVLDACANAE 90
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+G+ +H L+ + D +V TAL+ MY K L E+ + F I KDVVTW+ ++S
Sbjct: 91 AVEQGEMIHRLVARKKLDVGLIVGTALVGMYGKCSRLIEARQVFDGIVEKDVVTWSTMIS 150
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ + G +EA +F M + V
Sbjct: 151 AYAQLGHVREAIQLFGYMNLDGV 173
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + DL S ++ L + + F M + TF +L ACS L A
Sbjct: 234 VFGGMERRDLISWSAMLAVIAEHGHCKDAFVHFRRMDLEGVKPDYVTFVSLLDACSLLGA 293
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G +H + G S ++ +L+DMY K G L + E F + ++V+TW ++++
Sbjct: 294 LVEGHVIHTRIRAEGFQSVMYIENSLIDMYGKCGSLQAAREIFDRMSHRNVITWTTMITA 353
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++H KEA +F+ M + V+
Sbjct: 354 CVQHEQGKEALELFEEMEKAGVQ 376
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 39/62 (62%)
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
V +L++MY K G + E+ E F+ + ++V++W+ +++++ + G +A +FQ M E
Sbjct: 12 VGNSLLNMYGKCGGVEEAREFFESMTHRNVISWSTMVAAYAQRGDHDQALVLFQKMEEEG 71
Query: 173 VE 174
VE
Sbjct: 72 VE 73
>gi|242063912|ref|XP_002453245.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
gi|241933076|gb|EES06221.1| hypothetical protein SORBIDRAFT_04g002445 [Sorghum bicolor]
Length = 603
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 83/168 (49%), Gaps = 27/168 (16%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS----------RNFP----ATWALFC--YMHSTCLNL 74
++F ++ DL S N+ L Y + R P A+W Y LNL
Sbjct: 262 RLFADMPDRDLVSWNTILQGYVQQGDMDGATAWFRKMPEKDEASWNTLISGYKDEGALNL 321
Query: 75 TA-----------YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
+ T++ + CS+L A G+ VH IK G + + +V ++L+ MYSK
Sbjct: 322 LSEMTQGGYRPDQATWSVAISICSSLAALGCGRMVHVCTIKTGFERDALVMSSLISMYSK 381
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
GL+ E+ + F I +D VTWNA+++++ HGLA EA +F MT++
Sbjct: 382 CGLITEASQVFDLIVQRDTVTWNAMIATYAYHGLAAEALTLFDRMTKD 429
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 104 KGGTDSEP----VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+G D+ P V AL+ Y++ G + E+ E F + + VV+WNA++S +L +G+
Sbjct: 44 RGVFDTMPFRNSVSWAALLTGYARCGRVAEARELFDRMPDRSVVSWNAMISGYLWNGMVD 103
Query: 160 EAFGVFQAM 168
A +F M
Sbjct: 104 RARDLFDVM 112
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 80 TPVLGACSALPA--PERGKQVHALMIKGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKE 136
+P C+AL + E G A + G + +V A++ Y++ G++ + F E
Sbjct: 145 SPTTSVCNALLSGYAEHGYLKDAEDLFGRMQTPDLVSWNAMITGYTRAGMMQVAQRLFDE 204
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ KD V+W A++ +L++G A+ VFQ M V
Sbjct: 205 MPEKDTVSWTAIVRGYLQNGDVDAAWKVFQDMPDRDV 241
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ G +G + F E+ ++V TWN ++S +R+G+ +A GVF M
Sbjct: 5 RAGRVGAARRVFDEMSERNVFTWNCMISGLVRNGMLTDARGVFDTM 50
>gi|125544438|gb|EAY90577.1| hypothetical protein OsI_12178 [Oryza sativa Indica Group]
Length = 607
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F ++ D + N+ + Y R+ LF + T +TF L S
Sbjct: 295 LFKGMATWDSETCNAMISGYARNGLMEQALGLFTMALQNGILPTGFTFASALRWSSCFGL 354
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+G Q+HAL+ K G + + ++ TAL+DMY K L + + F + FKD+V WN ++
Sbjct: 355 VEQGTQIHALIFKLGLEDDLIIATALVDMYCKLASLKHAKKIFSRVSFKDLVLWNTMIIG 414
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+G KEA VF+ M + ++
Sbjct: 415 LSHNGRGKEALQVFRQMLKCNIQ 437
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ D + NS + Y +L M + + +TF+ +L SA+
Sbjct: 94 RLFDEMPDRDAVAYNSMMSGYIDGGRNNEALSLVWTMLEAGVRPSGFTFSIIL---SAVR 150
Query: 91 APERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G QVHA ++ VV AL++MY + GLL +V+ F + D+V+WN+++
Sbjct: 151 VARHGVQVHAAAVRHCFAHQNSVVGNALINMYRRVGLLEYAVQVFWSMNGHDIVSWNSVM 210
Query: 150 SSFLRHGLAKEAFGVFQ 166
S + G ++ F F+
Sbjct: 211 SVYRDDGQRRQVFECFR 227
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y QVF ++ D+ S NS + Y + F + S L + + VL AC
Sbjct: 190 YAVQVFWSMNGHDIVSWNSVMSVYRDDGQRRQVFECFRMIRSHGLFFDECSLSTVLSACI 249
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+G Q+ +K G ++ +A++ + L ++V FK + D T NA
Sbjct: 250 DAEDSSKGDQLLTHCVKMGLLRNSLICSAVIGLLCASDRLADAVYLFKGMATWDSETCNA 309
Query: 148 LLSSFLRHGLAKEAFGVF 165
++S + R+GL ++A G+F
Sbjct: 310 MISGYARNGLMEQALGLF 327
>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 579
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 2/137 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ GD NS + + ++ LF M T T VL AC+ L
Sbjct: 168 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 227
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q H ++K D + ++ AL+DMY K G L ++ F +++ +DV+TW+ ++S
Sbjct: 228 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMISG 285
Query: 152 FLRHGLAKEAFGVFQAM 168
++G ++EA +F+ M
Sbjct: 286 LAQNGYSQEALKLFELM 302
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ+FD++ ++ S + + +Y++ + L M + YT++ VL AC+ +
Sbjct: 68 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRACNGM 127
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +H +IK G +S+ V++AL+D+++K G +++ F E+ D + WN+++
Sbjct: 128 SDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 184
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
F ++ + A +F+ M R
Sbjct: 185 GGFAQNSRSDVALELFKRMKR 205
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/96 (19%), Positives = 49/96 (51%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T++ ++ C + A G + + G + L++MY K+ LL ++ + F ++
Sbjct: 15 TYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNLLNDAHQLFDQM 74
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++V++W ++S++ + + ++A + M R+ V
Sbjct: 75 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGV 110
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 67/121 (55%), Gaps = 7/121 (5%)
Query: 62 ALFCY--MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
ALF Y M + YTF ++ ACS L A E+GKQ+HA ++K +P V T+L+D
Sbjct: 585 ALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVD 644
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM-----TRERVE 174
MY+K G + ++ F+ + + V WNA++ +HG A+EA F M T +RV
Sbjct: 645 MYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVT 704
Query: 175 F 175
F
Sbjct: 705 F 705
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A++ YV Y ++F ++ DL S N+ + RS + LF +
Sbjct: 332 VSVANSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLR 391
Query: 70 TCLNLTAYTFTPVLGACSALPAPE-RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ L +T T VL ACS+L G+QVH +K G + V TAL+D+YSK G +
Sbjct: 392 SGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKME 451
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
E+ F + D+ +WNA++ F +EA +F M ER E
Sbjct: 452 EAELLFHNQDGFDLASWNAMMHGFTVSDNYREALRLFSLM-HERGE 496
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL+S N+ + +T S N+ LF MH TF A L ++GKQ+H
Sbjct: 464 DLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIH 523
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A++IK + V + ++DMY K G + + + F +I D V W ++S + +G +
Sbjct: 524 AVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 160 EAFGVFQAM 168
+A + M
Sbjct: 584 QALFTYHQM 592
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 6/140 (4%)
Query: 37 SHGDLSSLNSQLFSYTRSRNFP------ATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
S DL + N+ L +Y + + +F + + + T +T +P+ C
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+P + + +K G + V AL+++Y+K+ + E+ F + +DVV WN ++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+++ G E G+F A R
Sbjct: 197 AYVEMGAGDEVLGLFSAFHR 216
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
L + Y ++F D++ N L SY ++ F M + + + T+
Sbjct: 243 LEQVRAYATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIV 302
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L ++L E GKQ+H +++ G D V + ++MY K G + + F +++ D
Sbjct: 303 ILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMKEVD 362
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+++WN ++S R GL + + +F + R
Sbjct: 363 LISWNTVISGCARSGLEECSLRLFIDLLR 391
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSF 152
GK+ HA+++ G + + V L+ MY+K G L + + F +D+VT+NA+L+++
Sbjct: 32 GKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAAY 91
Query: 153 LR----HGLAK--EAFGVFQAMTR 170
H + K EAF +F+ + +
Sbjct: 92 AHTGELHDVEKTHEAFHIFRLLRQ 115
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR +F+ ++ S N+ + Y ++ F M S + ++T V+
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
A + L K +H L+I+ D V TAL+DMYSK G + + + F I + V+
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TWNA++ + HGL + A +F M + VE
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVE 548
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C I DA +++FD + DL S N+ + ++++ L
Sbjct: 188 VVNMYAK-CRQIDDA--------YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 238
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T VL A + + GK +H I+ G + TAL DMYSK G
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F ++ K VV+WN+++ ++++G ++A VF+ M E ++
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGID 346
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I + ++ L Y ++ + A C M + Y FT +L C
Sbjct: 102 RVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA 161
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+RGK++H +I + T +++MY+K + ++ + F + +D+V+WN +++
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F ++G AK+A + M E
Sbjct: 222 GFSQNGFAKKALELVLRMQDE 242
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S NS + Y ++ A+F M ++ T T L AC+ L
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 364
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
ERGK VH + + S+ V +L+ MYSK + + + F + + V+WNA++
Sbjct: 365 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILG 424
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++G EA F M
Sbjct: 425 YAQNGRVSEALNCFSEM 441
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
Q+ L+IK G +E + +T L+ ++SKYG + E+ F+ I+ K ++ +L + ++
Sbjct: 67 QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126
Query: 157 LAKEAFGVFQAMTRERVE 174
+ A M + V+
Sbjct: 127 SLETALAFLCRMRYDDVK 144
>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +PK QVFD++ D + ++ + Y R LF M +
Sbjct: 355 CFGQNGEVPK----ARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRP 410
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ VL C+ L + G+++HA +++ D + V + L+ MY K G L ++ + F
Sbjct: 411 NFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVF 470
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KDVV WN++++ + +HGL EA VF M
Sbjct: 471 DRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM 504
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + D+ NS + Y + +F MH + + TF VL ACS
Sbjct: 468 QVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTG 527
Query: 91 APERGKQV-HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
++G ++ +++ K + + ++D+ + G L E+++ +++ + D + W AL
Sbjct: 528 NVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGAL 587
Query: 149 LSSFLRH 155
L + H
Sbjct: 588 LGACRTH 594
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 22/149 (14%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM---HSTCLN--LTAYTFTPVLGAC 86
VFDE+ ++ S NS + Y +++ +F M ++ N ++ Y ++
Sbjct: 120 VFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEA 179
Query: 87 SAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ PER M++G Y K G++ E+ F ++ K+VV+
Sbjct: 180 REVFDRMPERNVVSWTAMVRG---------------YVKEGMISEAETLFWQMPEKNVVS 224
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
W +L L+ G EA +F M + V
Sbjct: 225 WTVMLGGLLQEGRIDEACRLFDMMPEKDV 253
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 36/58 (62%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ + +L+ YS+ G + ++ F E+ K++++WN++++ + ++ +EA +F M+
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS 156
>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
Length = 639
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ DL NS + + +S + LF M + T T VL AC+ +
Sbjct: 224 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMV 283
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVHA ++K D + ++ AL+DMY K G L ++ F + +DV++W+ ++S
Sbjct: 284 MLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWSTMVS 341
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++G + EA VF M + V
Sbjct: 342 GLAQNGKSVEALRVFDLMKSQGV 364
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
AYTF+ VLGAC+ P VHA +K G DS+ V+++L+D Y K G L F
Sbjct: 170 NAYTFSSVLGACTT---PGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDLDGGRRVF 226
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
E+ +D+V WN++++ F + G A +F M
Sbjct: 227 DEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRM 260
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 113 VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR-HGLAKEAFGVFQAMTRE 171
V +L MY+K+GLL +++ F + ++VVTW ++++ G +EA AM R+
Sbjct: 106 VSNSLASMYAKFGLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAMRRD 165
Query: 172 RV 173
V
Sbjct: 166 GV 167
>gi|357466605|ref|XP_003603587.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492635|gb|AES73838.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 568
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 81/144 (56%), Gaps = 3/144 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--HST-CLNLTAYTFTPVLG 84
Y +F ++ H ++ + N+ + +Y +R+ + ++F M HST + +TF V+
Sbjct: 60 YATLLFKQLLHPNIFTYNAIIRTYAHNRHHSSAISVFVQMLTHSTNSVFPDKFTFPFVIK 119
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C+ + G QVH L+ K G D + + AL+DMY+K+G L + + F+E+ +DV++
Sbjct: 120 SCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNACKVFEEMSHRDVIS 179
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN+L+ +++ G A +F M
Sbjct: 180 WNSLIFGYVKLGQMNSARELFDDM 203
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 76/174 (43%), Gaps = 31/174 (17%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF----------------------CY-- 66
+VF+E+SH D+ S NS +F Y + + LF CY
Sbjct: 167 KVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYGD 226
Query: 67 -------MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
M + + VL AC+ L A E GK +H K G + + AL++
Sbjct: 227 ALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIE 286
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
MY+K G + E+ F ++ KDV++W+ ++ HG EA +F+ M + RV
Sbjct: 287 MYAKCGCIDEAWNLFDQLVEKDVISWSTMIGGLANHGKGYEAIQLFEEMCKVRV 340
>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Brachypodium distachyon]
Length = 615
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + + S N+ + + RS LF M + L LT+ T VL AC+ L A
Sbjct: 199 MFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLSACALLGA 258
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ +H + K DS V TAL+DMY K G L +++ F+ +E +D W+ ++ +
Sbjct: 259 LELGRWIHEYVRKVQLDSLVKVNTALIDMYGKCGSLEDAISVFQGMESRDRQAWSVMIVA 318
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ H +EA +F+ M ++ ++
Sbjct: 319 YANHSYGREAISLFEEMKKQGIK 341
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
Query: 15 CISIADALPKRYVYTHQVFDEI-SHGDLSSLNSQLFSYTR-----SRNFPATWA--LFCY 66
C A P + Y QVFD I GD+ N+ L Y R PA A +F
Sbjct: 73 CTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRGYARCSAAGGARPPAEEAARVFVR 132
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + YTF +L AC+A A E G+Q H + +K G V L++MY++ G
Sbjct: 133 MLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGD 192
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F ++ + VV++NA++++ +R EA +F+ M
Sbjct: 193 ARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEALVLFREM 234
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 72/142 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFD + + DL S S + Y + + LF M + +T + V+ ACS L
Sbjct: 116 RRVFDGLFYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGL 175
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
GK H +++ G D V+ TAL+DMY + + +++ F E+ D + W +++
Sbjct: 176 GDLRLGKCFHGVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSII 235
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S+F R+ + +A G F +M R+
Sbjct: 236 SAFTRNDVYDKALGFFYSMCRK 257
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 82/160 (51%), Gaps = 6/160 (3%)
Query: 17 SIADALPK-RYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K R V Q VFD +S +L S + L Y ++ +F + +F +
Sbjct: 304 SLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIF----REGKKV 359
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
Y+F VL AC+ L A +GK+VH +K + V ++AL+D+Y+K G + + F
Sbjct: 360 DTYSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIF 419
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++++TWN+++ F ++G E F +F M E +
Sbjct: 420 VRMSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIR 459
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 5/138 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALF---CYMHSTCLNLTAYTFTPVLGACSA 88
VF E+ D S + ++TR+ + F C H L+ +TF VL AC
Sbjct: 219 VFVELPQPDAICWTSIISAFTRNDVYDKALGFFYSMCRKHG--LSPDGFTFGTVLTACGN 276
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L ++GK+VHA +I G V+++L+DMY K L+ +S F + K++V+W AL
Sbjct: 277 LGRLKQGKEVHAKVITSGLSGNVFVESSLVDMYGKCRLVNQSQCVFDRMSVKNLVSWTAL 336
Query: 149 LSSFLRHGLAKEAFGVFQ 166
L + ++G + +F+
Sbjct: 337 LGGYCQNGDFESVIRIFR 354
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG-LLGESVEAFKEI 137
+ +L C+ + G Q H+ IK G D++ V +L+ +Y K G L E+ F +
Sbjct: 63 YASLLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGL 122
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+KD+++W ++++ +++ K++ +F M +E
Sbjct: 123 FYKDLISWTSMITGYVKVEKPKKSLELFLEMLGLGIE 159
>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Cucumis sativus]
Length = 785
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +PK QVFD++ D + ++ + Y R LF M +
Sbjct: 355 CFGQNGEVPK----ARQVFDQMREKDEGTWSAMIKVYERKGLELDALELFRMMQREGIRP 410
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ VL C+ L + G+++HA +++ D + V + L+ MY K G L ++ + F
Sbjct: 411 NFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVF 470
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KDVV WN++++ + +HGL EA VF M
Sbjct: 471 DRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDM 504
Score = 39.7 bits (91), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 59/127 (46%), Gaps = 2/127 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + D+ NS + Y + +F MH + + TF VL ACS
Sbjct: 468 QVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTFVGVLSACSYTG 527
Query: 91 APERGKQV-HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
++G ++ +++ K + + ++D+ + G L E+++ +++ + D + W AL
Sbjct: 528 NVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMPMEADAIIWGAL 587
Query: 149 LSSFLRH 155
L + H
Sbjct: 588 LGACRTH 594
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 22/149 (14%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM---HSTCLN--LTAYTFTPVLGAC 86
VFDE+ ++ S NS + Y +++ +F M ++ N ++ Y ++
Sbjct: 120 VFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMSERNTISWNGLVSGYINNGMINEA 179
Query: 87 SAL--PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ PER M++G Y K G++ E+ F ++ K+VV+
Sbjct: 180 REVFDRMPERNVVSWTAMVRG---------------YVKEGMISEAETLFWQMPEKNVVS 224
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
W +L L+ G EA +F M + V
Sbjct: 225 WTVMLGGLLQEGRIDEACRLFDMMPEKDV 253
Score = 37.7 bits (86), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 36/58 (62%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ + +L+ YS+ G + ++ F E+ K++++WN++++ + ++ +EA +F M+
Sbjct: 99 ISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKMS 156
>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
mitochondrial-like [Glycine max]
Length = 711
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 68/138 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF + D + ++ + Y R LF M L L + VL C +L
Sbjct: 293 RVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLA 352
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GKQVHA +++ D + V + L+ MY K G L + + F KDVV WN++++
Sbjct: 353 SLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMIT 412
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +HGL +EA VF M
Sbjct: 413 GYSQHGLGEEALNVFHDM 430
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + ++ S S + Y R+ + LF +M ++T +LG
Sbjct: 107 RVFDTMPDRNVVSWTSMVRGYVRNGDVAEAERLFWHMPHK----NVVSWTVMLGGLLQEG 162
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +++ +M + + V T ++ Y + G L E+ F E+ ++VVTW A++S
Sbjct: 163 RVDDARKLFDMM----PEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVS 218
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ R+G A +F+ M ER E
Sbjct: 219 GYARNGKVDVARKLFEVMP-ERNE 241
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 10 FPAKTCISIADAL-----PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
P K +++ + + R +FDE+ ++ + + + Y R+ LF
Sbjct: 174 MPEKDVVAVTNMIGGYCEEGRLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLF 233
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M N ++T +LG + E A+ +K PVV +M +
Sbjct: 234 EVMPER--NEVSWTAM-LLGYTHSGRMREASSLFDAMPVK------PVV--VCNEMIMGF 282
Query: 125 GLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
GL GE +A FK ++ +D TW+A++ + R G EA G+F+ M RE
Sbjct: 283 GLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKGYELEALGLFRRMQRE 332
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ + S S + +Y R + LF M S + YT T ++ AC+
Sbjct: 352 EVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSS 411
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ ++G+ VH+ +IK G S V AL++MY+K G + E+ F +I KD+V+WN ++
Sbjct: 412 SLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIG 471
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ ++ L EA +F M ++
Sbjct: 472 GYSQNLLPNEALELFLDMQKQ 492
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 70/144 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +FDE+S D+ S NS + + +F M + + T VL AC+ +
Sbjct: 250 HNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANI 309
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +K E V L+DMYSK G L + E F ++ +V+W +++
Sbjct: 310 GNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSII 369
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
++++R GL +A G+F M + V
Sbjct: 370 AAYVREGLYSDAIGLFDEMQSKGV 393
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +I D+ S N+ + Y+++ LF M T VL AC+ L A
Sbjct: 454 VFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ-FKPDDITMACVLPACAGLAA 512
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G+++H +++ G S+ V AL+DMY+K GLL + F I KD+++W +++
Sbjct: 513 LDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTVMIAG 572
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ HG EA F M +E
Sbjct: 573 YGMHGFGNEAISTFNEMRIAGIE 595
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 16 ISIADALPKRYVYTH----------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
IS+ +AL + V+ + ++FD+I + + N + Y + NF + +LF
Sbjct: 125 ISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLWNLLMSEYAKIGNFRESVSLFK 184
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
M + YTFT VL +AL + K+VH ++K G S V +L+ Y K+G
Sbjct: 185 KMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFG 244
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F E+ DVV+WN++++ + +G + +F M VE
Sbjct: 245 GVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVE 293
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 8/154 (5%)
Query: 23 PKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTA 76
P+R H F +H + N+++ + + L S L L +
Sbjct: 37 PRRTCLLHSTVCVSPSFTNTTHSVTQNQNAKINKFCEMGDLRNAIELLTKSKSYELGLNS 96
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y VL C+ + E GK+VH+++I G + + L+ MY G L + + F +
Sbjct: 97 YC--SVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDK 154
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
I V WN L+S + + G +E+ +F+ M +
Sbjct: 155 IMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQK 188
>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
Length = 838
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +Y + N ++ +F M L YT+ +L C++L A + G+Q+H +IK
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK 443
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G V + L+DMY+K+G L + + + +DVV+W A+++ + +H L EA +
Sbjct: 444 SGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKL 503
Query: 165 FQAMTRERV 173
FQ M + +
Sbjct: 504 FQEMENQGI 512
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 63/106 (59%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LFC MH + + T Y F+ VL AC+ + + G+Q+H ++K G SE V AL+ +YS
Sbjct: 200 LFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYS 259
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++G L + + F ++ +D +++N+L+S + G + A +F+ M
Sbjct: 260 RWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKM 305
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGA 85
+ Q+F ++ D S NS L S R F LF M C+ T +L A
Sbjct: 265 IAAEQIFSKMHRRDRISYNS-LISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSA 323
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+++ A +GKQ+H+ +IK G S+ +++ +L+D+Y K + + E F E ++VV W
Sbjct: 324 CASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLW 383
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRE 171
N +L ++ + G E++ +F M E
Sbjct: 384 NVMLVAYGQLGNLSESYWIFLQMQIE 409
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+ + D+ S + + YT+ F LF M + + F+ + AC+ + A
Sbjct: 472 ILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQA 531
Query: 92 PERGKQVHALMIKGGTDSEPVVKTAL-----MDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+G+Q+HA G + + AL + +YSK G + ++ F E+ K+VV+WN
Sbjct: 532 LNQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWN 591
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
A+++ + +HG EA +F+ M +
Sbjct: 592 AMITGYSQHGYGSEAVSLFEEMKQ 615
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD+I ++S N + + LF M + + TF VL ACS
Sbjct: 66 KLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGK 125
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
AP + +Q+HA +I G S P+V L+D+YSK G + + F+ + KD V+W A++
Sbjct: 126 APFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMI 185
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
S ++G EA +F M + V
Sbjct: 186 SGLSQNGREDEAILLFCQMHKSAV 209
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
K++HA + K G D E V+ + L+D+Y +G + +++ F +I +V WN ++S L
Sbjct: 30 KKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVISGLLAK 89
Query: 156 GLAKEAFGVFQAMTRERV 173
LA + G+F M E V
Sbjct: 90 KLASQVLGLFSLMITENV 107
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H+ F E+S D+ N+ + YT+ A ++ M + ++ +TF VL AC
Sbjct: 37 YAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG 96
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
GKQ+H K G S V+ +L+ MY+K+G + + F ++ + VV+W +
Sbjct: 97 GTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTS 156
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S ++++G EA VF+ M + V+
Sbjct: 157 IISGYVQNGDPMEALNVFKEMRQCNVK 183
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 20 DALPKRYV--YTHQVFDEISHGD-LSSLNSQLFSYTRSRNFPATW-ALFCYMHSTCLNLT 75
D L R V +T + + +GD + +LN +F R N W AL M T
Sbjct: 144 DKLHDRTVVSWTSIISGYVQNGDPMEALN--VFKEMRQCNVKPDWIALVSVM-------T 194
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
AYT LG +GK +H L+ K G + EP + +L MY+K GL+ + F
Sbjct: 195 AYTNVEDLG---------QGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 245
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+E +++ WNA++S + +G +EA +F+ M + +
Sbjct: 246 RMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNI 283
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + +L N+ + Y + LF M + + + + T + A + + +
Sbjct: 244 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 303
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E + + + K + V T L+DMY+K G + + F + KDVV W+ ++ +
Sbjct: 304 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGY 363
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
HG +EA ++ M + V
Sbjct: 364 GLHGHGQEAICLYNEMKQAGV 384
>gi|224084768|ref|XP_002307403.1| predicted protein [Populus trichocarpa]
gi|222856852|gb|EEE94399.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 75/142 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D+ S + + + ++ + +F M + +T + +L AC A
Sbjct: 97 VFDRMVERDVVSWTTMITACSQQGRCGEAFGMFTQMLNGGFLPNGFTASGILKACGEEKA 156
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GKQ+H ++K + V T+L+DMY+K G + +S + F + ++ VTW ++++
Sbjct: 157 LKFGKQIHGAIVKKMYKDDVFVGTSLVDMYAKCGEVSDSSKVFNGMRRRNTVTWTSIIAG 216
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ R GL +EA +F+ M R RV
Sbjct: 217 YARKGLGEEAICLFRLMMRRRV 238
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 58/100 (58%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
++T++ L AC+ L +GK +H+ K S V +AL+ MY++ G + E+++ F
Sbjct: 342 NSFTYSSALKACANLETVLQGKLIHSSANKTPASSNVFVGSALIHMYARCGYVSEAIQVF 401
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +++VTW A++ ++R+GL +EA + M E ++
Sbjct: 402 DSMPERNLVTWRAMIMGYVRNGLCQEALKLMYRMQAEGIQ 441
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF+ + + + S + Y R LF M + T +L AC
Sbjct: 195 SSKVFNGMRRRNTVTWTSIIAGYARKGLGEEAICLFRLMMRRRVVSNNLTIVSMLRACGL 254
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A G++VHA +IK + S + + L+ Y K G + + +++ F+DVV+W A+
Sbjct: 255 IGALLAGREVHAQIIKNCSQSNEYLGSTLVWFYCKCGESRTASKVLQQMPFRDVVSWTAI 314
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+S G EA + M E VE
Sbjct: 315 ISGHACLGHESEALEFLKEMMEEGVE 340
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL CS E G+QVHA ++KG + +V +A++ Y + G L + F +
Sbjct: 43 TFVCVLNLCSRRLDFELGRQVHARVVKGNWRN-LIVDSAVVYFYVQCGDLKSAFCVFDRM 101
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+DVV+W ++++ + G EAFG+F M
Sbjct: 102 VERDVVSWTTMITACSQQGRCGEAFGMFTQM 132
>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 642
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 77/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FDE+ + S N + Y ++ +F LF M S+ ++ T VL A + +
Sbjct: 225 NLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIG 284
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GK +H K + + V+ +AL+DMYSK G + E+++ F+ + ++ +TW+A++
Sbjct: 285 ALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPKRNAITWSAIIG 344
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+F HG A++A F M + V
Sbjct: 345 AFAMHGRAEDAIIHFHLMGKAGV 367
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 16/113 (14%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY-------SKYGLLGE 129
+TF VL AC+ GKQ+H L++K G + V + L+ MY Y L +
Sbjct: 123 FTFPSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCK 182
Query: 130 SVEAF---------KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+V F K + +VV WN ++ +R G K A +F M + V
Sbjct: 183 NVVDFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSV 235
>gi|302790359|ref|XP_002976947.1| hypothetical protein SELMODRAFT_50342 [Selaginella moellendorffii]
gi|300155425|gb|EFJ22057.1| hypothetical protein SELMODRAFT_50342 [Selaginella moellendorffii]
Length = 280
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD+ D+ S NS + +Y ++ + A LF + + + +F L ACS
Sbjct: 34 RMFDDTLERDVVSWNSLMAAYAQNGHCKDAALELFWKLSHSGMKPDKASFVAALDACSNS 93
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A ++GK +H+ +++ G +S+ VV TAL++MY K G L ++E F+ ++ ++ +TWNA++
Sbjct: 94 LALKQGKLLHSGILEHGYESDLVVGTALVNMYGKCGSLDSALEFFQGMKKRNFITWNAMM 153
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
SF +G A GV++ M + V
Sbjct: 154 GSFAENGHGMRACGVYREMEQAGV 177
>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
lyrata]
Length = 1112
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 77/142 (54%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ +S +L S N+ L R+ +F + L + L ++A+TF +L + + +
Sbjct: 431 FESLSEKNLVSYNTFLDGTCRNLDFEHAFELLSEIAERELGVSAFTFASLLSGVANVGSL 490
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+G+Q+H+ ++K G V AL+ MYSK G + + F ++ ++V++W ++++ F
Sbjct: 491 RKGEQIHSQVLKLGLSCNQPVCNALISMYSKCGSIDTASRVFSLMDNRNVISWTSMITGF 550
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+HG A+ F MT+E V+
Sbjct: 551 AKHGFAERVLETFNQMTKEGVK 572
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 92/186 (49%), Gaps = 15/186 (8%)
Query: 1 MLSFIRMT-NFPAKTCI--SIADALPK---RYVYTHQVFDEISHGDLSSLNSQLFSYTRS 54
+L F+ T +F + C+ S+ D K + ++VFD++S ++ + + + +
Sbjct: 188 ILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW-TLMITRCMQ 246
Query: 55 RNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV 113
FP F M + +T + V AC+ L G+Q+H+ I+ G + V
Sbjct: 247 MGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGRQLHSWAIRSGLADD--V 304
Query: 114 KTALMDMYSKY---GLLGESVEAFKEIEFKDVVTWNALLSSFLRH-GLAKEAFGVFQAM- 168
+ +L+DMY+K G + + + F ++ V++W AL++ ++++ LA EA +F M
Sbjct: 305 ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWTALITGYMQNCNLATEAINLFSEMI 364
Query: 169 TRERVE 174
T+ VE
Sbjct: 365 TQGHVE 370
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ + TF+ +L +C GK VHA +I+ + + V+ +L+ +YSK G L ++ +
Sbjct: 60 MDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNSLISLYSKSGDLTKAKDV 119
Query: 134 FKEIEF---KDVVTWNALLSSFLRHGLAKEAFGVF 165
F+ + +DVV+W+A+++ F +G +A +F
Sbjct: 120 FETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLF 154
Score = 36.2 bits (82), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA--LFCYMHSTC-LNLTAYTFTPVLGAC 86
+VFD + + S + + Y ++ N AT A LF M + + +TF+ AC
Sbjct: 325 RKVFDRMQDHSVMSWTALITGYMQNCNL-ATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ P GKQV K G S V +++ M+ K + ++ AF+ + K++V++N
Sbjct: 384 GNVSDPRVGKQVLGHAFKRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYN 443
Query: 147 ALLSSFLRHGLAKEAF 162
L R+ + AF
Sbjct: 444 TFLDGTCRNLDFEHAF 459
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ + L +Y ++ + LF M ++ + T T +L C+ A
Sbjct: 355 LFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGA 414
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK VH+ + K + + ++ TAL+DMY+K G + + F E +D+ WNA+++
Sbjct: 415 LDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITG 474
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F HG +EA +F M R+ V+
Sbjct: 475 FAMHGYGEEALDIFAEMERQGVK 497
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F+ ++ + S + + RS LF M + T ++ C
Sbjct: 253 QLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTG 312
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+HA +++ G + TAL+DMY K + + F + +DV+ W A+LS
Sbjct: 313 ALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLS 372
Query: 151 SFLRHGLAKEAFGVFQAM 168
++ + +AF +F M
Sbjct: 373 AYAQANCIDQAFNLFDQM 390
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD++ D+ S ++ + S +R++ F L M+ + + ++ +
Sbjct: 147 YARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFA 206
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
GK +HA +I+ + V TAL+DMY+K G LG + + F + K VV+W
Sbjct: 207 DTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSW 266
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ +R +E +F M E +
Sbjct: 267 TAMIAGCIRSNRLEEGTKLFIRMQEENI 294
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL AC + + GK++H ++K G D + V ALM MY + + + F ++ +D
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERD 159
Query: 142 VVTWNALLSSFLRH 155
VV+W+ ++ S R+
Sbjct: 160 VVSWSTMIRSLSRN 173
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 1/140 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSA 88
Q F+E+ DL + + Y +S LFC M S+ + +TF VL AC++
Sbjct: 260 QQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVLQACAS 319
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L G Q+H+ ++K G DS V ALMD+Y+K G + SV+ F K+ V WN +
Sbjct: 320 LVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTI 379
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ +++ G ++A +F M
Sbjct: 380 IVGYVQLGDGEKALNLFSNM 399
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N+ + Y + + LF M + T T++ VL A ++L A E G+Q+H+L IK
Sbjct: 377 NTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIK 436
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
+ + VV +L+DMY+K G + ++ F +++ +D V+WNAL+ + HGL EA +
Sbjct: 437 TMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICGYSIHGLGMEALNL 496
Query: 165 FQAMTR 170
F M +
Sbjct: 497 FDMMQQ 502
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD I D+ S + Y + + LFC M +T + L +C+ L
Sbjct: 160 QVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLE 219
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GK VH +K D + V AL+++Y+K G + E+ + F+E+ D++ W+ ++S
Sbjct: 220 AFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMIS 279
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + +KEA +F M + V
Sbjct: 280 RYAQSDKSKEALELFCRMRQSSV 302
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+ + S + ++RS F L + + + FT +L ++
Sbjct: 59 KLFDEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMD 118
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ VHA + K G ++ V TAL+D YS G + + + F I FKD+V+W +++
Sbjct: 119 LADTCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVA 178
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + +++ +F M
Sbjct: 179 CYAENYCHEDSLLLFCQM 196
>gi|224091072|ref|XP_002309169.1| predicted protein [Populus trichocarpa]
gi|222855145|gb|EEE92692.1| predicted protein [Populus trichocarpa]
Length = 619
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 68/143 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D+ S +S + Y + LF M + Y VL AC+ L A
Sbjct: 203 VFDGMLEKDIVSWSSMIQGYASNGLPKEALDLFFKMLNEGFRPDCYAMVGVLCACARLGA 262
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G LM + PV+ TAL+DMY+K G + + E F+ + KD+V WNA +S
Sbjct: 263 LELGNWASNLMDRNEFLGNPVLGTALIDMYAKCGRMDSAWEVFRGMRKKDIVVWNAAISG 322
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
G K AFG+F M + +E
Sbjct: 323 LAMSGHVKAAFGLFGQMEKSGIE 345
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 76/139 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y+H++F + ++ N+ + + +F + ++ M L+ ++TF +L AC+
Sbjct: 60 YSHRIFHQTKEPNIFLFNTMIHGLVLNDSFQESIEIYHSMRKEGLSPDSFTFPFLLKACA 119
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G ++H L++K G +S+ V T+L+ +Y K G + + + F +I K+V W A
Sbjct: 120 RLLDSKLGIKLHGLVVKAGCESDAFVNTSLVSLYGKCGFIDNAFKVFDDIPEKNVAAWTA 179
Query: 148 LLSSFLRHGLAKEAFGVFQ 166
++S ++ G +EA +F+
Sbjct: 180 IISGYIGVGKCREAIDMFR 198
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H+ F E+S D+ N+ + YT+ A ++ M + ++ +TF VL AC
Sbjct: 52 YAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACG 111
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
GKQ+H K G S V+ +L+ MY+K+G + + F ++ + VV+W +
Sbjct: 112 GTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTS 171
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S ++++G EA VF+ M + V+
Sbjct: 172 IISGYVQNGDPMEALNVFKEMRQCNVK 198
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 22/159 (13%)
Query: 20 DALPKRYV--YTHQVFDEISHGD-LSSLNSQLFSYTRSRNFPATW-ALFCYMHSTCLNLT 75
D L R V +T + + +GD + +LN +F R N W AL M T
Sbjct: 159 DKLHDRTVVSWTSIISGYVQNGDPMEALN--VFKEMRQCNVKPDWIALVSVM-------T 209
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
AYT LG +GK +H L+ K G + EP + +L MY+K GL+ + F
Sbjct: 210 AYTNVEDLG---------QGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFN 260
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+E +++ WNA++S + +G +EA +F+ M + +
Sbjct: 261 RMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIR 299
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 62/141 (43%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + +L N+ + Y + LF M + + + + T + A + + +
Sbjct: 259 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 318
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E + + + K + V T L+DMY+K G + + F + KDVV W+ ++ +
Sbjct: 319 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGY 378
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
HG +EA ++ M + V
Sbjct: 379 GLHGHGQEAICLYNEMKQAGV 399
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR +F+ ++ S N+ + Y ++ F M S + ++T V+
Sbjct: 398 KRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVI 457
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
A + L K +H L+I+ D V TAL+DMYSK G + + + F I + V+
Sbjct: 458 PALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVI 517
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
TWNA++ + HGL + A +F M + VE
Sbjct: 518 TWNAMIDGYGTHGLGRAALDLFDKMKKGAVE 548
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 9/168 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C I DA +++FD + DL S N+ + ++++ L
Sbjct: 188 VVNMYAK-CRQIDDA--------YKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLR 238
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T VL A + + GK +H I+ G + TAL DMYSK G
Sbjct: 239 MQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGS 298
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F ++ K VV+WN+++ ++++G ++A VF+ M E ++
Sbjct: 299 VETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGID 346
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ I + ++ L Y ++ + A C M + Y FT +L C
Sbjct: 102 RVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNA 161
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+RGK++H +I + T +++MY+K + ++ + F + +D+V+WN +++
Sbjct: 162 DLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIA 221
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F ++G AK+A + M E
Sbjct: 222 GFSQNGFAKKALELVLRMQDE 242
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S NS + Y ++ A+F M ++ T T L AC+ L
Sbjct: 305 IFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGD 364
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
ERGK VH + + S+ V +L+ MYSK + + + F + + V+WNA++
Sbjct: 365 LERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILG 424
Query: 152 FLRHGLAKEAFGVFQAM 168
+ ++G EA F M
Sbjct: 425 YAQNGRVSEALNCFSEM 441
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
Q+ L+IK G +E + +T L+ ++SKYG + E+ F+ I+ K ++ +L + ++
Sbjct: 67 QIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNS 126
Query: 157 LAKEAFGVFQAMTRERVE 174
+ A M + V+
Sbjct: 127 SLETALAFLCRMRYDDVK 144
>gi|359485428|ref|XP_002276142.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g58590-like [Vitis vinifera]
Length = 921
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E++ ++ S N+ + Y+R+ + W LF M T +TF +L +C++L
Sbjct: 109 KVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSEMRRYGFEPTQHTFAGLL-SCASLK 167
Query: 91 APERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G Q+ A M+K G ++P TAL+ ++ + G + E V AF+E+ K++VTWN ++
Sbjct: 168 LSQ-GFQLQAQMVKSGLFHADPYAGTALLSLFGRNGCIDEVVCAFEEMPQKNLVTWNTVI 226
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
S F +G ++E+ +F+ + R
Sbjct: 227 SLFGNYGFSEESMFLFRELMR 247
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+Y T +F + D+ S N + + R+ ++ + LF +M + YT +L
Sbjct: 532 QYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLS 591
Query: 85 ACSALPAPERGKQVHALMIKGGTD---SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
C+ L G +H +IK TD + V L+DMY K G + S++ F +I ++
Sbjct: 592 VCTKLCNLALGSSIHGFIIK--TDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIERN 649
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
++TW AL+S+ +G A EA +F+ M
Sbjct: 650 IITWTALISALGVNGYANEALKLFREM 676
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ ++L YV ++F+ D+ S N+ + + +S LF M
Sbjct: 289 VSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSL 348
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ TF V+ +C+ L G+ +HA +I+ +S V +AL+D Y+K L
Sbjct: 349 DGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLES 408
Query: 130 SVEAFKEIEFKDVVTWNALL 149
+ F EI+ K+VV WNAL+
Sbjct: 409 AHCCFDEIDEKNVVCWNALI 428
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 68/141 (48%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+E+ +L + N+ + + + LF + T L+ +F VL ++
Sbjct: 211 FEEMPQKNLVTWNTVISLFGNYGFSEESMFLFRELMRTGAGLSECSFMGVLSGFASEQDL 270
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+QVH L+IK G D E V +L++MY K + + + F+ +DVV+WN ++ +
Sbjct: 271 ELGEQVHDLLIKNGFDCEVSVLNSLINMYVKCSCICLAEKMFELGCVRDVVSWNTMIGAL 330
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+ + +F M+ + V
Sbjct: 331 AKSERPSKVLELFLKMSLDGV 351
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDS-EPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
AC P + K +HAL + ++S +P+ + L+ +Y G L + + F E+ ++V
Sbjct: 60 ACKKAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTARKVFGEMTQRNV 119
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
V++N ++ + R+G +EA+ +F M R
Sbjct: 120 VSYNTIIGGYSRNGSVEEAWNLFSEMRR 147
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 74/176 (42%), Gaps = 38/176 (21%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H FDEI ++ N+ + Y+ ++ F + +L M ++F+ L +
Sbjct: 410 HCCFDEIDEKNVVCWNALILGYS-NKCFSSV-SLLKRMLQLGYCPNEFSFSAALKSSLVF 467
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV------------------ 131
+Q+H L+++ G V +AL+ Y+K G++ +++
Sbjct: 468 EL----QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAI 523
Query: 132 --------------EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F +E D+V+WN L+++ R+G KE F +F+ M ++
Sbjct: 524 AGVYNKIGQYHRTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQI 579
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 12 AKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA--- 62
A TCI A+ L Y H +F+ I D+ S NS + Y+++ +++
Sbjct: 45 ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQ 104
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + AYT + A S+L + G+Q HAL++K + + V T+L+ MY
Sbjct: 105 LFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYC 164
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K GL+ + ++ F + ++ TW+ ++S + G +EA VF RE+ E
Sbjct: 165 KAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D++ S + Y ++ + L+ M + + T VL ACS+L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E GKQVH IK G E + +AL MYSK G L + F+ KDVV+WNA++S
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+G EA +F+ M E +E
Sbjct: 500 SHNGQGDEALELFEEMLAEGME 521
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 31 QVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++FD S GD +S+ ++ + Y+++ LF M S + + YT VL ACS
Sbjct: 277 KMFD--SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ E GKQ+H+ ++K G + TAL+DMY+K G L ++ + F ++ +DV W +L
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S ++++ +EA +++ M
Sbjct: 395 ISGYVQNSDNEEALILYRRM 414
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y FT VL + +A G+Q+H + IK G + AL+ MYSK L E+ + F
Sbjct: 222 YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 281
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ +TW+A+++ + ++G + EA +F M
Sbjct: 282 SGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+ VH +I+ G + L++ Y+K G L ++ F I KDVV+WN+L++ + +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 155 HGLAKEAFGVFQAMTRERVE 174
+G ++ V Q R +
Sbjct: 93 NGGISSSYTVMQLFREMRAQ 112
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 78/143 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E+ ++ S NS + T++ ++ F M TF L +C+ L
Sbjct: 409 KIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLA 468
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GKQ+H L++K G ++ V AL+ MY+K G + + FK+I+ DVV+WN+L++
Sbjct: 469 ALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIA 528
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ +G +EA +F M E V
Sbjct: 529 AYALNGNGREALKLFHKMEVEGV 551
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +I H D+ S NS + +Y + N LF M + TF +L ACS +
Sbjct: 511 LFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACSHVGL 570
Query: 92 PERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
++G ++ M++ + EP+ + ++D+ + G L E+ + + ++ + W AL
Sbjct: 571 IDQGLKLFKCMVQ-AYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKINANAGIWGAL 629
Query: 149 LSSFLRHG 156
L + HG
Sbjct: 630 LGACRIHG 637
Score = 42.4 bits (98), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 19/177 (10%)
Query: 4 FIRMTNFPAKTCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
F MT+ T S+ A K R Q+FD + ++ S NS + +Y +
Sbjct: 38 FQHMTHKNTVTHNSMISAFAKNGRISDARQLFDGMPQRNIVSWNSMIAAYLHNDRVEEAR 97
Query: 62 ALFCYM-----HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
LF M +S L +T YT L L + L K PV A
Sbjct: 98 QLFDKMPTRDLYSWTLMITCYTRNGELAKARNL--------FNLLPYKWN----PVCCNA 145
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ Y+K E+ F + KD+V+WN++L+ + R+G + F+ M V
Sbjct: 146 MVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDV 202
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
YS+ G + E++ FK++ KD+V+WN +++S+ + G A +F+ M + +
Sbjct: 367 YSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNI 419
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/143 (18%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ ++ + N+ + +Y ++ + +LF M + ++T V+ +
Sbjct: 254 RLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEK----NSISWTTVINGYVRMG 309
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +Q+ M +TA++ Y + + ++ + F +I +DVV WN +++
Sbjct: 310 KLDEARQLLNQMPYRNV----AAQTAMISGYVQNKRMDDARQIFNQISIRDVVCWNTMIA 365
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + G EA +F+ M ++ +
Sbjct: 366 GYSQCGRMDEALHLFKQMVKKDI 388
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 30/169 (17%)
Query: 20 DALPKRYV---------YTH--------QVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
D +P+R + Y H Q+FD++ DL S + YTR+
Sbjct: 70 DGMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTRNGELAKARN 129
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAP-ERGKQVHAL--MIKGGTDSEPVVKTALMD 119
LF NL Y + PV C+A+ A + +Q + + V +++
Sbjct: 130 LF--------NLLPYKWNPV--CCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLT 179
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y++ G + ++ F+E+ +DVV+WN ++ F+ G ++ F+ +
Sbjct: 180 GYTRNGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKI 228
Score = 40.0 bits (92), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 64/157 (40%), Gaps = 26/157 (16%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS---TCLNLTAY 77
A +++ ++FD + DL S NS L YTR+ F M NL
Sbjct: 151 AKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTRNGEMRLGLQFFEEMAERDVVSWNLMVD 210
Query: 78 TFTPVLGACSA------LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
F V S+ +P P V ++ ++++G + E+
Sbjct: 211 GFVEVGDLNSSWEFFEKIPNPN-----------------TVSWVTMLCGFARFGKIAEAR 253
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F ++ ++VV WNA++++++++ EA +F M
Sbjct: 254 RLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEM 290
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
Y++ G + +++ F+E++ K++V+WN+L+S ++G +A F M E
Sbjct: 398 YAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALKSFMLMGHE 448
>gi|147853495|emb|CAN82291.1| hypothetical protein VITISV_021279 [Vitis vinifera]
Length = 954
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 82/141 (58%), Gaps = 3/141 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E++ ++ S N+ + Y+R+ + W LF + T +TF +L +C++L
Sbjct: 109 EVFGEMTQRNVVSYNTIIGGYSRNGSVEEAWNLFSELRRYGFEPTQHTFAGLL-SCASLK 167
Query: 91 APERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G Q+ A M+K G ++P TAL+ ++ + G + E V AF+E+ K++VTWN ++
Sbjct: 168 LSQ-GFQLQAQMVKSGLFHADPYAGTALLSLFRRNGCIDEVVCAFEEMPLKNLVTWNTVI 226
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
S F +G ++E+ +F+ + R
Sbjct: 227 SLFGNYGFSEESMFLFRELMR 247
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
+Y T +F + D+ S N + + R+ ++ + LF +M + YT +L
Sbjct: 532 QYHXTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQIYPDNYTVVSLLS 591
Query: 85 ACSALPAPERGKQVHALMIKGGTD---SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
C+ L G +H +IK TD + V L+DMY K G + S++ F +I ++
Sbjct: 592 VCTKLCNLALGSSIHGFIIK--TDFKFCDTFVFNVLIDMYGKCGCIESSLKIFNKIIXRN 649
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
++TW AL+S+ +G A EA +F+ M
Sbjct: 650 IITWTALISALGVNGYANEALKLFREM 676
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 6/140 (4%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ ++L YV ++F+ D+ S N+ + + +S LF M
Sbjct: 289 VSVLNSLINMYVKCSCIXLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSL 348
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ TF V+ +C+ L G+ +HA +I+ +S V +AL+D Y+K L
Sbjct: 349 DGVLPNETTFVSVINSCTNLQILVFGEYIHAKVIRNKIESNVFVGSALVDFYAKCDNLES 408
Query: 130 SVEAFKEIEFKDVVTWNALL 149
+ F EI+ K+VV WNAL+
Sbjct: 409 AHCCFDEIDEKNVVCWNALI 428
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF + T L+ +F VL ++ E G+QVH L+IK G D E V +L++MY
Sbjct: 241 LFRELMRTGAGLSECSFMGVLSGFASEQDLELGEQVHDLLIKNGFDXEVSVLNSLINMYV 300
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
K + + + F+ +DVV+WN ++ + + + +F M+ + V
Sbjct: 301 KCSCIXLAEKMFELGCVRDVVSWNTMIGALAKSERPSKVLELFLKMSLDGV 351
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 85 ACSALPAPERGKQVHALMIKGGTDS-EPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
AC P + K +HAL + ++S +P+ + L+ +Y G L + E F E+ ++V
Sbjct: 60 ACKTAPTLKETKPLHALTVTMASNSTQPIFLYNNLISLYVLQGELSTAREVFGEMTQRNV 119
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTR 170
V++N ++ + R+G +EA+ +F + R
Sbjct: 120 VSYNTIIGGYSRNGSVEEAWNLFSELRR 147
Score = 40.8 bits (94), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 32/110 (29%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV------------------------ 131
+Q+H L+++ G V +AL+ Y+K G++ +++
Sbjct: 470 QQLHCLIMRMGYQQNEYVSSALITSYAKNGIISDALIFDAASNKPLLVGPSNAIAGVYNK 529
Query: 132 --------EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F +E D+V+WN L+++ R+G KE F +F+ M ++
Sbjct: 530 IGQYHXTQDLFSLLEEPDIVSWNILIAACARNGDYKEVFELFKHMQMAQI 579
>gi|357478705|ref|XP_003609638.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510693|gb|AES91835.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 589
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 80/147 (54%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ H++FDE+SH ++ S + + Y R LF M T + +TF+ ++ ACS
Sbjct: 76 HAHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCLFHQMQGTLVMPNEFTFSTLINACS 135
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E G+++HAL+ G S+ VV ++L+DMY K + E+ F + ++VV+W +
Sbjct: 136 ILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSWTS 195
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++++ ++G A +F+ R+
Sbjct: 196 MITTYSQNGQGHLALQLFREFNHIRMN 222
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 15 CISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
C S+ D K R +FD + ++ S S + +Y+++ LF + +
Sbjct: 162 CSSLIDMYGKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRM 221
Query: 73 NL-TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
N + + AC++L GK H ++I+ G D+ VV +AL+DMY+K G + S
Sbjct: 222 NKPNHFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSD 281
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ I VV + +++ ++GL + +FQ M R++
Sbjct: 282 KVFRRIVNPSVVPYTSMIVGAAKYGLGTLSLRLFQEMVDRRIK 324
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 36/70 (51%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
HA ++K G ++ L++ Y K + + + F E+ +VV+W+ L++ ++R G
Sbjct: 46 HANVVKSGLSNDTFTTNNLINSYLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQP 105
Query: 159 KEAFGVFQAM 168
A +F M
Sbjct: 106 NIALCLFHQM 115
>gi|224058585|ref|XP_002299553.1| predicted protein [Populus trichocarpa]
gi|222846811|gb|EEE84358.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF VL ACS + A E GKQVH L+ K G + V+ +L++MYS GL+G + + F +I
Sbjct: 128 TFPFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLINMYSSCGLIGFACQVFNKI 187
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ DVV+WN+++S + G +E +F M++ +
Sbjct: 188 DDLDVVSWNSMISGLVDLGFVEEGKQMFDRMSKRSL 223
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
C + + +L ++ ++ L E GKQ+ M K V L+D Y K
Sbjct: 181 CQVFNKIDDLDVVSWNSMISGLVDLGFVEEGKQMFDRMSK----RSLVTWNCLIDGYVKV 236
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
GLL E+ E F ++ K+ V+WN ++ ++ GL ++A G F M E
Sbjct: 237 GLLMEARELFDQMVGKNSVSWNTMIDGYVSLGLMEDAKGFFDKMPWE 283
>gi|222635245|gb|EEE65377.1| hypothetical protein OsJ_20684 [Oryza sativa Japonica Group]
Length = 769
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + S N+ + Y ++ N+ ++ LF M +TF+ VL AC+++P
Sbjct: 172 FDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPML 231
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSS 151
G Q+H L+ K + + AL+ MYS+ G L ++ FK++ K D+V+WNAL+
Sbjct: 232 GLGAQIHQLVEKSFV-PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGC 290
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG A +A +F+ M R +V
Sbjct: 291 YEHHGRATKALQLFKEMRRAKV 312
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+G+ H ++ + G + V ++M Y K G + + F E+ KD+V+WN ++S +
Sbjct: 70 KGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYT 129
Query: 154 RHGLAKEAFGVFQAM 168
+ KE+ +F M
Sbjct: 130 QASDMKESEKLFWEM 144
Score = 36.6 bits (83), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + V ++ Y++ + ES + F E+ D V+WN ++ F++ G A+ A G F
Sbjct: 115 DKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDR 174
Query: 168 M 168
M
Sbjct: 175 M 175
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ + +AL YV VFD + D S N+ + Y + LF M
Sbjct: 230 VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
++ T T V+ AC AL G++VH +IK G +E V +L+ M+S G E
Sbjct: 290 FFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDE 349
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F ++EFKD+V+W A++S + ++GL ++A + M E V
Sbjct: 350 AEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGV 393
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +++ DL S N + Y ++ F L+ M + YTF VL C LP
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
RG++VH +I+ G +S+ V AL+ MY K G + + F + +D ++WNA++S
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ + + E +F M RE
Sbjct: 271 YFENDVCLEGLRLF-FMMRE 289
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACSAL 89
+VF I + ++ S S + N+ + ALF + L + T VL AC+ +
Sbjct: 453 EVFHRIPNKNVISWTSIILGL--RLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARI 510
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A GK++HA ++ G + + AL+DMY + G + + F E KDV +WN LL
Sbjct: 511 GALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILL 569
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ + + G A +F M V
Sbjct: 570 TGYAQQGKGGLAVELFHKMIESDV 593
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF ++ DL S + + Y ++ + M + T VL AC+ L
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G +H + G S +V +L+DMYSK + +++E F I K+V++W +++
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + EA FQ M
Sbjct: 473 LRLNYRSFEALFFFQQM 489
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M +++ T+ +L C A G +VH+ + K T + AL+ M+ ++G
Sbjct: 85 MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L E+ F ++ +D+ +WN L+ + + G EA ++ M
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM 186
>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR + +VF E+ H ++ + L Y+ +R +F M + TF L
Sbjct: 274 KRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGL 333
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+CSAL + GK++H + +K G + V +L+ MYS G + ++V F EI K +V
Sbjct: 334 NSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIV 393
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTR 170
+WN+++ +HG K AF +F M R
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F ++ ++ S + + ++ LF M C+ T+ TFT V+ AC+ P
Sbjct: 180 KLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCVITACANAP 239
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G QVH +IK G E V +L+ +Y+ +S + F E+ + V W ALLS
Sbjct: 240 AFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEMVHEKVAVWTALLS 299
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ + ++A VF M R +
Sbjct: 300 GYSLNRKHEDALNVFSEMIRNSI 322
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 66/152 (43%), Gaps = 8/152 (5%)
Query: 22 LPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP 81
L +R +VFD++ +S + YTRS LF M ++
Sbjct: 47 LNRRLDEAREVFDQVPSPHVSLYTKMISGYTRSNRLVDALNLFDEMPLR----DVVSWNS 102
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
++ C + ++ M + V TA+++ ++G++ ++ F ++ KD
Sbjct: 103 MISGCVECGDIDTAVKMFDEM----PERSVVSWTAMVNGCFRFGMVDQAERLFCQMPVKD 158
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ WNA++ +L+ G +A +F+ M R+ V
Sbjct: 159 IAAWNAMVHGYLQFGKVDDALKLFKQMPRKNV 190
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/146 (18%), Positives = 65/146 (44%), Gaps = 8/146 (5%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R V +FDE+ D+ S NS + + +F M + ++T ++
Sbjct: 81 RLVDALNLFDEMPLRDVVSWNSMISGCVECGDIDTAVKMFDEMPER----SVVSWTAMVN 136
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
C ++ +++ M + A++ Y ++G + ++++ FK++ K+V++
Sbjct: 137 GCFRFGMVDQAERLFCQM----PVKDIAAWNAMVHGYLQFGKVDDALKLFKQMPRKNVIS 192
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTR 170
W ++ ++ + EA +F+ M R
Sbjct: 193 WTTMICGLDQNERSGEALNLFKNMLR 218
>gi|255567935|ref|XP_002524945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535780|gb|EEF37442.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 417
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 70/137 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + DL N + Y + LF M + + T VL AC + A
Sbjct: 216 LFDGLEDRDLVCWNVMIDGYVQHGLANEGLVLFRQMLKDRVRPSEVTVLAVLSACGQIGA 275
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ VH+ + G + V +AL+DMYSK G L ++ F+ I++KDVV WN++++
Sbjct: 276 LESGRWVHSYIQNNGIEINAHVGSALIDMYSKCGNLEDARLVFERIKYKDVVVWNSMVTG 335
Query: 152 FLRHGLAKEAFGVFQAM 168
+ HG +++A +F M
Sbjct: 336 YATHGFSQDALQLFNEM 352
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 35/131 (26%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS------------ 122
A+TF+ +L +C E + +HA IK G DS+ V+T L+D+Y+
Sbjct: 131 NAFTFSSILKSCPL----EFAQIIHAQAIKFGLDSDLYVRTCLVDVYARGGDFVSARNLF 186
Query: 123 -------------------KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
K+G++ E+ F +E +D+V WN ++ +++HGLA E
Sbjct: 187 DEIPEKSLVSSTAMITCFAKHGMVKEARVLFDGLEDRDLVCWNVMIDGYVQHGLANEGLV 246
Query: 164 VFQAMTRERVE 174
+F+ M ++RV
Sbjct: 247 LFRQMLKDRVR 257
>gi|242059069|ref|XP_002458680.1| hypothetical protein SORBIDRAFT_03g038060 [Sorghum bicolor]
gi|241930655|gb|EES03800.1| hypothetical protein SORBIDRAFT_03g038060 [Sorghum bicolor]
Length = 552
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 12/167 (7%)
Query: 17 SIADALPKRYVYTHQVFDEI--------SHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
S+ +AL Y H+V D + DL S NS L ++ S + T LF M
Sbjct: 236 SVCNALIDLYGKCHRVHDATMVFEGLPDTDKDLFSWNSMLSAHQYSADHTGTMRLFARMR 295
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK----TALMDMYSKY 124
T L A T VL AC+ A + G++VH ++ G + + AL DMY+K
Sbjct: 296 RTALLPDAVTVAAVLPACAQTAALQVGREVHGYIVTSGLACDGALDVFACNALADMYAKS 355
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G L ++ F +DV +WN ++ + HG +EA +F M E
Sbjct: 356 GGLDDACRVFDWTRQRDVASWNIMIDGYASHGHGQEALMLFHQMIEE 402
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 73/148 (49%), Gaps = 6/148 (4%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGAC 86
+ H++FDE+ H D+ NS + + + F F M + ++++T T +L C
Sbjct: 151 HAHRLFDELRHRDVVVWNSMVNGFVKLGCFDRATECFRKMREEGGVEISSFTVTGILSMC 210
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVT 144
+A RG VH L +K G D E V AL+D+Y K + ++ F+ + KD+ +
Sbjct: 211 TATADFGRGAAVHGLSVKSGFDKEASVCNALIDLYGKCHRVHDATMVFEGLPDTDKDLFS 270
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRER 172
WN++LS+ H + + G + R R
Sbjct: 271 WNSMLSA---HQYSADHTGTMRLFARMR 295
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A++F P+ S+ PA + +HAL ++ G + +AL+ ++GL + F
Sbjct: 101 AFSFPPIF---SSAPASPQLLALHALALRFGLVHDLFCASALLRGCLRFGLADHAHRLFD 157
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E+ +DVV WN++++ F++ G A F+ M E
Sbjct: 158 ELRHRDVVVWNSMVNGFVKLGCFDRATECFRKMREE 193
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+++ D S NS + + + F F MH + Y+F L AC+ L
Sbjct: 106 HIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEYSFGSALSACAGLQ 165
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+H+L+ + S+ + +AL+DMYSK G + + F E+ + V+WN+L++
Sbjct: 166 DLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEMTVRSRVSWNSLIT 225
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G EA +F M + VE
Sbjct: 226 CYEQNGPVDEALKIFVEMIKCGVE 249
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 11/150 (7%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
RY++++ + D+ + N+ + T++ LF + + T YTF +L
Sbjct: 339 RYMFSNMMVK-----DVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLLN 393
Query: 85 ACSALPAPERGKQVHALMIKGG------TDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
AC+ L + G+Q H+ ++K G DS+ V +L+DMY K G + F+ +
Sbjct: 394 ACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHML 453
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KD V+WNA++ + ++G +A VF M
Sbjct: 454 EKDCVSWNAMIVGYAQNGFGNKALEVFCKM 483
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 80/181 (44%), Gaps = 32/181 (17%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y VFDE++ S NS + Y ++ +F M + T V+
Sbjct: 201 RVEYAQSVFDEMTVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVS 260
Query: 85 ACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGE-----------SVE 132
AC+ + A + G+Q+HA ++K ++ ++ AL+DMY+K + E SV
Sbjct: 261 ACATISAIKEGQQIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVV 320
Query: 133 A--------------------FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ F + KDV+TWNAL++ ++G +EA +F+ + RE
Sbjct: 321 SETSMVSGYAKASKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRES 380
Query: 173 V 173
V
Sbjct: 381 V 381
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 55/107 (51%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L ++ L L + F+ +L C+ + +VHA +IK SE ++ L+D+Y
Sbjct: 5 GLVKHLKGDLLFLDSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVY 64
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K G + + + F + +++ +WN+++ +F + G +A +F+ M
Sbjct: 65 GKCGCVDVARKLFDRMLERNIFSWNSIICAFTKSGFLDDAVHIFEKM 111
>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 725
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS L +RS AT + + +F P+L A S + A G ++H K
Sbjct: 83 NSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFK 142
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
T S+P V+T LMDMY+ G + + F E+ +DVVTWN ++ + R GL EAF +
Sbjct: 143 IATLSDPFVETGLMDMYAACGRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKL 202
Query: 165 FQAMTRERV 173
F+ M V
Sbjct: 203 FEEMKDSNV 211
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 73/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+ DL + + +Y S + +F M + + T V+ AC L
Sbjct: 303 IFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGT 362
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++ K VH G +S + AL++MY+K G L + + F+++ ++VV+W++++++
Sbjct: 363 LDKAKWVHRYTHLNGLESVLPIDNALINMYAKCGGLDAARDVFEKMPTRNVVSWSSMINA 422
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F HG A ++ +F M +E VE
Sbjct: 423 FAMHGEASDSLSLFAQMKQENVE 445
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 67/175 (38%), Gaps = 31/175 (17%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y VFDE+S D+ + N+ + Y R + LF M + + ++
Sbjct: 164 RINYARNVFDEMSQRDVVTWNTMIERYCRFGLLDEAFKLFEEMKDSNVMPDEMILCNIVS 223
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTAL---------MDM--------------- 120
AC + ++ +I+ + + TAL MDM
Sbjct: 224 ACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDMAMEFFRKMSVRNLFV 283
Query: 121 -------YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
YSK G L ++ F + E KD+V W ++S++ +EA VF+ M
Sbjct: 284 STAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHPQEALRVFEEM 338
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
VF+++ ++ S +S + ++ + +LF M + TF VL CS
Sbjct: 403 DVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNEVTFVGVLYGCSHSG 462
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E GK++ A M + + M D++ + LL E++E + + +VV W +L
Sbjct: 463 LVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIESMPMAPNVVIWGSL 522
Query: 149 LSSFLRHG 156
+S+ HG
Sbjct: 523 MSACRVHG 530
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 63/112 (56%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + YTF VL AC L A + GK++H L+I+ G + V +AL+DMY
Sbjct: 257 LFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYC 316
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K + + FK + K+VV+W A+L + ++G ++EA VF M R +E
Sbjct: 317 KCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIE 368
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 69/141 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF +++ ++ S + L Y ++ +FC M + +T V+ +C+
Sbjct: 323 YAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCA 382
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + E G Q H + G S V AL+ +Y K G + +S + F E+ F+D V+W A
Sbjct: 383 NLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTA 442
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
L+S + + G A E +F+ M
Sbjct: 443 LVSGYAQFGKANETIDLFERM 463
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 33/177 (18%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF-------------------CY-- 66
Y VFD++ + S N+ L +Y++S + +F CY
Sbjct: 58 YARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGS 117
Query: 67 -----------MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKT 115
M LNL TF+ +L S+ + G+Q+H ++K G + V +
Sbjct: 118 VVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGS 177
Query: 116 ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+L+DMY+K GL+ + + F E++ ++VV +N +++ LR G+ K++ +F M +ER
Sbjct: 178 SLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGM-KER 233
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 1 MLSFIRMTNFPAK---TCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNF 57
++SFI ++N C SI D ++Q+FDE+S D S + + Y +
Sbjct: 402 LISFITVSNALITLYGKCGSIED--------SNQLFDEMSFRDEVSWTALVSGYAQFGKA 453
Query: 58 PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTA 116
T LF M L A TF VL ACS ERG+Q M+K G T
Sbjct: 454 NETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTC 513
Query: 117 LMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRHG 156
++D++ + G L E+ ++ F D + W LLSS +G
Sbjct: 514 MIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554
Score = 38.9 bits (89), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 54 SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV 113
+RN L C + + N + + ++ A S L + V M + + S +
Sbjct: 18 TRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTM 77
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+A YSK G L E F + +D V+WN+L+S ++ +G EA + +M ++ V
Sbjct: 78 LSA----YSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGV 133
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + K++H L+IK T+ E + L++ YSK G + + F ++ + +W
Sbjct: 15 CCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSW 74
Query: 146 NALLSSFLRHG 156
N +LS++ + G
Sbjct: 75 NTMLSAYSKSG 85
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ + +AL YV VFD + D S N+ + Y + LF M
Sbjct: 230 VDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMRE 289
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
++ T T V+ AC AL G++VH +IK G +E V +L+ M+S G E
Sbjct: 290 FFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSVGCWDE 349
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ F ++EFKD+V+W A++S + ++GL ++A + M E V
Sbjct: 350 AEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGV 393
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 1/140 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF +++ DL S N + Y ++ F L+ M + YTF VL C LP
Sbjct: 151 VFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPD 210
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
RG++VH +I+ G +S+ V AL+ MY K G + + F + +D ++WNA++S
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270
Query: 152 FLRHGLAKEAFGVFQAMTRE 171
+ + + E +F M RE
Sbjct: 271 YFENDVCLEGLRLF-FMMRE 289
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACSAL 89
+VF I + ++ S S + N+ + ALF + L + T VL AC+ +
Sbjct: 453 EVFHRIPNKNVISWTSIILGL--RLNYRSFEALFFFQQMILSLKPNSVTLVSVLSACARI 510
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A GK++HA ++ G + + AL+DMY + G + + F E KDV +WN LL
Sbjct: 511 GALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNSCE-KDVASWNILL 569
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ + + G A +F M V
Sbjct: 570 TGYAQQGKGGLAVELFHKMIESDV 593
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF ++ DL S + + Y ++ + M + T VL AC+ L
Sbjct: 353 VFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEITIASVLSACAGLGL 412
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++G +H + G S +V +L+DMYSK + +++E F I K+V++W +++
Sbjct: 413 LDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILG 472
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + EA FQ M
Sbjct: 473 LRLNYRSFEALFFFQQM 489
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M +++ T+ +L C A G +VH+ + K T + AL+ M+ ++G
Sbjct: 85 MQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGD 144
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
L E+ F ++ +D+ +WN L+ + + G EA ++ M
Sbjct: 145 LVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNLYHRM 186
>gi|359492699|ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Vitis vinifera]
Length = 1545
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 75/141 (53%)
Query: 34 DEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPE 93
D + D +S NS + Y ++ + +F M S C+ + T +L AC+ L A +
Sbjct: 486 DGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAK 545
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+ K++H +++ SE V L+D Y+K G + + F+ I KD+++WN+L++ ++
Sbjct: 546 KVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYV 605
Query: 154 RHGLAKEAFGVFQAMTRERVE 174
HG + A +F MT+ V+
Sbjct: 606 LHGCSDSALDLFDQMTKMGVK 626
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 77/144 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ +L + ++ + +Y+R + + F +M + + +L AC
Sbjct: 140 KVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCG 199
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK +H+L+I+ G + V +++ +Y+K G L + F+ ++++D V+WN++++
Sbjct: 200 DAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIIT 259
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + G +++ +F+ M E +E
Sbjct: 260 GYCQKGELEKSHQLFEKMQEEGIE 283
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 68/134 (50%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ + S + + ++ LF M + T T + AC++L A ++G ++H
Sbjct: 320 DVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELH 379
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++ +K G + +V +L+DMYSK G L ++ F I KDV TWN+++ + + G
Sbjct: 380 SVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCG 439
Query: 160 EAFGVFQAMTRERV 173
+A+ +F M V
Sbjct: 440 KAYDLFIKMHESDV 453
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 55/101 (54%), Gaps = 1/101 (0%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVE 132
N+ T+ +L +C + E G+++HA I + P V+T L+ MY+K G LGE+ +
Sbjct: 82 NVKPNTYMQLLQSCIDQGSAELGRKLHA-RIGLLEEMNPFVETKLVSMYAKCGSLGEARK 140
Query: 133 AFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F E+ +++ W+A++ ++ R + +E F M + +
Sbjct: 141 VFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGI 181
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 16 ISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A+ L Y VY +F IS D+ S NS + Y + LF M
Sbjct: 563 LSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQMTK 622
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSE--PVVK--TALMDMYSKYG 125
+ + TF ++ A S ++GKQV + M++ D + P ++ +A++D+ + G
Sbjct: 623 MGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMME---DYQILPGLEHHSAMIDLLGRSG 679
Query: 126 LLGESVEAFKEIEFK-DVVTWNALLSSFLRHG 156
LGE++E +++ + D W ALL++ HG
Sbjct: 680 KLGEAIEFIEDMAIEPDSCIWAALLTASKIHG 711
>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
lyrata]
Length = 950
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 2/160 (1%)
Query: 11 PAKTCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
P C ++ AL + V +VFD++ D ++ + +Y R LF M
Sbjct: 264 PVIACNAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALELFAQMQ 323
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ + + +L C+ L + + G+QVHA +++ D + V + LM MY K G L
Sbjct: 324 RQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGELV 383
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ F KD++ WN+++S + HGL +EA VF M
Sbjct: 384 KAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEM 423
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ Y GL E+ + F E+ +++V+WN L+S ++++ + +EA VF+ M V
Sbjct: 52 NSIVSGYFANGLPREARQMFDEMPERNIVSWNGLVSGYIKNRMIEEARNVFEIMPERNV 110
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S+ G + E+ + F + +K + +WN+++S + +GL +EA +F M +
Sbjct: 28 SRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQMFDEMPERNI 79
>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F+E+ L S NS + + + LF M +N T +L AC+
Sbjct: 220 QLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 279
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + +HA + + G +++ ++ TAL+++Y+K G L S + F+EI+ +D + W A+L+
Sbjct: 280 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLA 339
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ H +EA +F M +E VE
Sbjct: 340 GYAVHACGREAIKLFDLMVKEGVE 363
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACS 87
++FDE+ + DL S NS + + A FC M + + T V+ AC+
Sbjct: 116 AQRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACA 175
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ A + GK +H +++K G + V +L++MY K G L + + F+E+ + +V+WN+
Sbjct: 176 DMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNS 235
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
++ +G A++ +F M R
Sbjct: 236 MVVIHNHNGYAEKGMDLFNLMKR 258
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+HA +IK S+ + L+ MY K G ++ F E+ KD+V+WN+L+S G
Sbjct: 84 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 143
Query: 158 AKEAFGVFQAMTRE 171
F M E
Sbjct: 144 LGACLNAFCRMRTE 157
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + Y ++ ALF M + T + L AC+ L A
Sbjct: 370 IFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGA 429
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK VH ++ K + V TAL+DMY+K G + E+ F ++ K+VV+WNA++S
Sbjct: 430 LSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAMISG 489
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG EA +++ M R+
Sbjct: 490 YGLHGQGAEALKLYKDMLDARI 511
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 70/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + DL + N+ + Y+ + ++ LF + ++ + T V+ S
Sbjct: 269 LFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGH 328
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ +HA ++K D++ +V TAL +Y + + + F + K + +WNA++S
Sbjct: 329 ELLARCLHAFVVKARLDADALVSTALTTLYCRLNDMESARSIFDAMLEKTMESWNAMISG 388
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ ++GL + A +FQ M V+
Sbjct: 389 YAQNGLTEMAVALFQLMQELNVQ 411
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+ VH +K G V T LM +YSK G + + F ++ D+V +NAL+S +
Sbjct: 231 GRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSV 290
Query: 155 HGLAKEAFGVFQAMT 169
+G+ + + +F+ +T
Sbjct: 291 NGMVESSVELFKELT 305
>gi|255539102|ref|XP_002510616.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551317|gb|EEF52803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 390
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSA 88
+FDE+ DL S NS + ++R + +F M + T L TF ++ AC+
Sbjct: 98 QNLFDELPEKDLVSWNSLISGFSRRGDLDNCLNVFSKMKYQTILKPNEVTFISLISACTD 157
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A GK VH +K GT E V AL+ +Y K G L + F+E++ +++V+WN++
Sbjct: 158 AGALGMGKYVHGFAVKLGTILEVKVVNALICLYGKSGCLDAACRIFEEMQVQNLVSWNSI 217
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
++ ++ G A++ F M R +
Sbjct: 218 IAVHVQRGFAQDGLRYFIVMRRAGI 242
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E+ +L S NS + + + F M + T +L AC ++
Sbjct: 201 RIFEEMQVQNLVSWNSIIAVHVQRGFAQDGLRYFIVMRRAGIVSDQATLVILLQACESVG 260
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + +H + G + V+TAL+ +Y+ G+L S + F+E+ KD V W A+L+
Sbjct: 261 LRKLVEAIHGYIFGCGLNMNLAVETALLKLYANLGMLSASHKVFREMVNKDAVAWTAMLA 320
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ HG KEA +F+ M RE
Sbjct: 321 CYAVHGCGKEAIELFELMVRE 341
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 37/76 (48%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+H+ +IK + + V + Y + G ++ F E+ KD+V+WN+L+S F R G
Sbjct: 65 LHSRVIKSLSYNHGFVGDQFVSAYVRLGCTKDAQNLFDELPEKDLVSWNSLISGFSRRGD 124
Query: 158 AKEAFGVFQAMTRERV 173
VF M + +
Sbjct: 125 LDNCLNVFSKMKYQTI 140
>gi|51535392|dbj|BAD37262.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|51535558|dbj|BAD37476.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 908
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + S N+ + Y ++ N+ ++ LF M +TF+ VL AC+++P
Sbjct: 360 FDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPML 419
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSS 151
G Q+H L+ K + + AL+ MYS+ G L ++ FK++ K D+V+WNAL+
Sbjct: 420 GLGAQIHQLVEKSFV-PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGC 478
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG A +A +F+ M R +V
Sbjct: 479 YEHHGRATKALQLFKEMRRAKV 500
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP----VVKTALMDMYSKYGLLGESV 131
A ++ +L A SA P P+ H + D P V L+ Y++ GL+ E+
Sbjct: 98 AVSWNTLLAAYSASPHPD-----HLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEAR 152
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F E+ ++ +WN +++ F G +A VF AM
Sbjct: 153 RLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAM 189
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+G+ H ++ + G + V ++M Y K G + + F E+ KD+V+WN ++S +
Sbjct: 258 KGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYT 317
Query: 154 RHGLAKEAFGVFQAM 168
+ KE+ +F M
Sbjct: 318 QASDMKESEKLFWEM 332
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + V ++ Y++ + ES + F E+ D V+WN ++ F++ G A+ A G F
Sbjct: 303 DKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDR 362
Query: 168 M 168
M
Sbjct: 363 M 363
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 69/140 (49%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
T+++F + ++ S + + SYTR+ +F LF M + + T L A +
Sbjct: 139 TNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAG 198
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + GK VH I+ G + V ALM+MY K G + E+ F + KD ++WN L
Sbjct: 199 NESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTL 258
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+ + R LA EAF +F M
Sbjct: 259 IGGYSRSNLANEAFTLFNEM 278
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%), Gaps = 7/159 (4%)
Query: 16 ISIADALPKRYV---YTHQ---VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ +A+AL + YV Y + +FD ++ D S N+ + Y+RS + LF M
Sbjct: 221 LPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLL 280
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
L A T +L A ++L + ERG+++HA ++ G + V AL+DMY K G L
Sbjct: 281 Q-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLL 339
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F + K++++W +++ + HG ++A +F+ M
Sbjct: 340 ARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQM 378
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ D+ S NS + + + LF M L + T V+ AC
Sbjct: 41 VFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHY 100
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G VH ++ G SE + AL+DMYS + + F+ +E K+VV+W A+++S
Sbjct: 101 SFIGGVVHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITS 160
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ R G + G+FQ M E +
Sbjct: 161 YTRAGHFDKVAGLFQEMGLEGI 182
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G VH ++K G ++ V AL+ Y+K + +++ F E+ +D+++WN+++
Sbjct: 3 GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCAS 62
Query: 155 HGLAKEAFGVFQAMTRERVEF 175
+GL +A +F M E E
Sbjct: 63 NGLYDKAVELFVRMWLEGQEL 83
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F + D S NS + + + F F MH L Y+F L ACS L
Sbjct: 112 LFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHRDDFVLNDYSFGSGLSACSRLKD 171
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G Q+H L+ K + + + L+D YSK GL+G + F +E K+VV+WN L++
Sbjct: 172 LKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGCARRVFDGMEEKNVVSWNCLITC 231
Query: 152 FLRHGLAKEAFGVFQAMT 169
+ ++G A EA F MT
Sbjct: 232 YEQNGPAIEALEAFGRMT 249
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 6/143 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F I D+ S N+ + YT++ LF + + T YTF +L A + L
Sbjct: 346 MFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPTHYTFGNLLNASANLAD 405
Query: 92 PERGKQVHALMIKGG----TDSEP--VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
E G+Q H+ ++K G + EP V +L+DMY K G + E + F+ + KD V+W
Sbjct: 406 LELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEEGLRVFENMVEKDHVSW 465
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
N ++ + ++G EA +FQ M
Sbjct: 466 NTMIIGYAQNGYGMEALELFQKM 488
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 36/177 (20%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT--AYTFTPVLGACSA 88
+VFD + ++ S N + Y +N PA AL + T L T V+ AC+
Sbjct: 212 RVFDGMEEKNVVSWNCLITCY--EQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACAT 269
Query: 89 LPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGE------------------ 129
L A + G Q+HA ++K ++ ++ AL+DMY+K G + E
Sbjct: 270 LAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETT 329
Query: 130 ---------SVEA----FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
SV+A F I+ KD+V+WNAL++ + ++G +EA G+F+ + RE V
Sbjct: 330 MVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESV 386
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 46/90 (51%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
F +L C L + + VH +I+ E ++ L+D+Y K G L + + F +
Sbjct: 27 FAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMS 86
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++V ++N+++S+ +R G E+ +F M
Sbjct: 87 ERNVFSFNSIISTLMRWGFVDESAWLFSLM 116
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 76/150 (50%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +Q+F + D N+ + + +++ LF M L+ + + L
Sbjct: 325 RLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVSISAALS 384
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ LPA GK +H+ MIKG DSE ++AL+DMY K G L + F + K+ V+
Sbjct: 385 ACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVS 444
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN++++++ HG + + +F M + ++
Sbjct: 445 WNSIIAAYGSHGHLEVSLALFHKMLEDGIQ 474
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 60/101 (59%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A T VL AC+ L GK++HA ++K G D V +A+MDMY+K G L + + F
Sbjct: 274 NAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMDMYAKCGRLDLAYQIF 333
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + KD V WNA++++ ++G +EA +F+ M RE + +
Sbjct: 334 RRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSY 374
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ + D N L + + + +F M + + TF VL C++
Sbjct: 28 RLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEA 87
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G Q+H L+I G +P+V AL+ MYSK+G L ++++ F + +VVTWN +++
Sbjct: 88 LSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTNVVTWNGMIA 147
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
F+++G EA +F M V
Sbjct: 148 GFVQNGFMDEASLLFSEMISAGV 170
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 76/143 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ + ++ + N + + ++ LF M S ++ + TF L + +
Sbjct: 129 KLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESA 188
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ ++GK++H +++ G + +K+AL+D+Y K +G + + FK+ D+V A++S
Sbjct: 189 SLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIIS 248
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ +GL +A +F+ + E++
Sbjct: 249 GYVLNGLNNDALEIFRWLLEEKM 271
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 2/127 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S NS + +Y + + ALF M + TF +L AC
Sbjct: 433 VFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQ 492
Query: 92 PERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
++G Q M + G + ++D++ + G L E+ E K + F D W LL
Sbjct: 493 VDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLL 552
Query: 150 SSFLRHG 156
+ HG
Sbjct: 553 GACRVHG 559
Score = 41.2 bits (95), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
G + + V ++L+ +Y++ G + ++ F ++ KD V WN +L+ F++ G A VF
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 166 QAM 168
+ M
Sbjct: 62 EDM 64
>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial [Vitis vinifera]
Length = 623
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 76/140 (54%), Gaps = 4/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FDE+ ++ S + + +Y+ N A L M + +T++ VL AC LP
Sbjct: 111 DLFDEMPERNVVSWTTMISAYSNKLNDKALKCLI-LMFREGVRPNMFTYSSVLRACDGLP 169
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+Q+H +IK G +S+ V++AL+D+YSK+ L ++ F E+ +D+V WN+++
Sbjct: 170 NL---RQLHCGIIKTGLESDVFVRSALIDVYSKWSDLDNALGVFDEMPTRDLVVWNSIIG 226
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
F ++ EA +F+ M R
Sbjct: 227 GFAQNSDGNEALNLFKRMKR 246
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 74/137 (54%), Gaps = 2/137 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ DL NS + + ++ + LF M T T VL AC+ L
Sbjct: 209 VFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLRACTGLAL 268
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+QVH ++K D + ++ AL+DMY K G L ++ AF + KDV++W+ +++
Sbjct: 269 LELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVISWSTMVAG 326
Query: 152 FLRHGLAKEAFGVFQAM 168
++G +++A +F++M
Sbjct: 327 LAQNGYSRQALELFESM 343
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A T++ ++ CSA A + GK+VH + G + + V L++MY K+ LL E+ + F
Sbjct: 55 AITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFD 114
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E+ ++VV+W ++S++ + L +A M RE V
Sbjct: 115 EMPERNVVSWTTMISAY-SNKLNDKALKCLILMFREGV 151
>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14820-like [Vitis vinifera]
Length = 731
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D+ + L +Y ++ + LF M ++ + T T +L C+ A
Sbjct: 315 LFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGA 374
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK VH+ + K + + ++ TAL+DMY+K G + + F E +D+ WNA+++
Sbjct: 375 LDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITG 434
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
F HG +EA +F M R+ V+
Sbjct: 435 FAMHGYGEEALDIFAEMERQGVK 457
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD++ D+ S ++ + S +R++ F L M+ + + ++ +
Sbjct: 177 YARLVFDKMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFA 236
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVV--KTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
GK +HA +I+ + V TAL+DMY+K G LG + + F + K VV+W
Sbjct: 237 DTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSW 296
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ +R +EA +F + V
Sbjct: 297 TAMIAGCIRSNRLEEARALFDSTQNRDV 324
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP--VLGACSALPAPERGKQVHALM 102
N + SYT+ RN P AL Y ++ F VL AC + + GK++H +
Sbjct: 93 NFVITSYTK-RNQPRN-ALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+K G D + V ALM MY + + + F ++ +DVV+W+ ++ S R+
Sbjct: 151 LKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 203
>gi|297605437|ref|NP_001057211.2| Os06g0228900 [Oryza sativa Japonica Group]
gi|255676854|dbj|BAF19125.2| Os06g0228900 [Oryza sativa Japonica Group]
Length = 695
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + S N+ + Y ++ N+ ++ LF M +TF+ VL AC+++P
Sbjct: 324 FDRMPERGTISWNTMISGYEKNGNYISSVKLFSKMLEVGEIPDRHTFSSVLAACASIPML 383
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSS 151
G Q+H L+ K + + AL+ MYS+ G L ++ FK++ K D+V+WNAL+
Sbjct: 384 GLGAQIHQLVEKSFV-PDTAISNALITMYSRCGALNDAEAIFKQMHTKKDLVSWNALIGC 442
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG A +A +F+ M R +V
Sbjct: 443 YEHHGRATKALQLFKEMRRAKV 464
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP----VVKTALMDMYSKYGLLGESV 131
A ++ +L A SA P P+ H + D P V L+ Y++ GL+ E+
Sbjct: 62 AVSWNTLLAAYSASPHPD-----HLAAARRLFDEMPQRDVVTWNTLLGAYARRGLMDEAR 116
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F E+ ++ +WN +++ F G +A VF AM
Sbjct: 117 RLFDEMPQRNAASWNTMVTGFFAAGQVVKALDVFDAM 153
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%)
Query: 94 RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
+G+ H ++ + G + V ++M Y K G + + F E+ KD+V+WN ++S +
Sbjct: 222 KGQYQHNMLKRKGFERNVVSWNSMMICYIKAGDVCSARALFNEMPDKDLVSWNTMISGYT 281
Query: 154 RHGLAKEAFGVFQAM 168
+ KE+ +F M
Sbjct: 282 QASDMKESEKLFWEM 296
Score = 37.0 bits (84), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
D + V ++ Y++ + ES + F E+ D V+WN ++ F++ G A+ A G F
Sbjct: 267 DKDLVSWNTMISGYTQASDMKESEKLFWEMPDPDTVSWNLIIQGFMQKGEAEHARGFFDR 326
Query: 168 M 168
M
Sbjct: 327 M 327
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 79/159 (49%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA +VFD ++ D S + +Y S + + M +
Sbjct: 193 CGSVRDA--------RRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRP 244
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T+ VL AC +L A E+GKQ+HA +++ S+ V TAL MY K G + ++ E F
Sbjct: 245 SRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAVKDAREVF 304
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + +DV+ WN ++ + G +EA G+F M +E V
Sbjct: 305 ECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECV 343
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 10 FPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
F K + I + L K YV+ ++FD+ S+ + S N + Y + L
Sbjct: 73 FGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNL 132
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M L +TF +L ACS+ A G++VH +++ G + V AL+ MY+K
Sbjct: 133 FTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAK 192
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
G + ++ F + +D V+W L ++ G A+E+ + AM +E V
Sbjct: 193 CGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGV 242
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+ ++ AL K Y+ +VF+ + + D+ + N+ + S +F M
Sbjct: 281 VRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLK 340
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
C+ T+ +L AC+ GK++HA +K G S+ AL++MYSK G + +
Sbjct: 341 ECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKD 400
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F + +DVV+W AL+ + G E+F F+ M ++ VE
Sbjct: 401 ARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVE 445
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + D+ S + + Y +++ F M + T+ VL ACS
Sbjct: 403 QVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPV 462
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + GK++HA ++K G ++ V ALM MY K G + +++ + + +DVVTWN L+
Sbjct: 463 ALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIG 522
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++G EA F+ M E +
Sbjct: 523 GLAQNGRGLEALQKFEVMKSEEM 545
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
Y+H + +Y + +L +C GKQVH +++ G + L+ +Y G
Sbjct: 34 YLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCG 93
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ E+ F + K VV+WN ++S + GL +EAF +F M +E +E
Sbjct: 94 SVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLE 142
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 10/144 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA+ +V + +S D+ + N+ + ++ F M S +
Sbjct: 496 CGSVEDAI--------RVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRP 547
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEA 133
A TF V+ AC E G++ A M K G ++D+ ++ G LGE+ +
Sbjct: 548 NATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDV 607
Query: 134 FKEIEFK-DVVTWNALLSSFLRHG 156
+ FK W ALL++ HG
Sbjct: 608 ILTMPFKPSAAMWGALLAACRAHG 631
>gi|224141809|ref|XP_002324255.1| predicted protein [Populus trichocarpa]
gi|222865689|gb|EEF02820.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + + S + + YTR ++ +F M + + VL AC+ L A
Sbjct: 207 LFDLMPYRTIVSWTAMISGYTRLGSYADALYVFRQMQIVGVEPDEISIISVLPACAQLGA 266
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GK +H + G + + ALM+MYSK G +G++ + F ++ DV++W+ ++
Sbjct: 267 LEVGKWIHMYCDRNGLLRKTSICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGG 326
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG A+EA +F+ M + ++E
Sbjct: 327 LANHGKAREAIELFKRMKKAKIE 349
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF V+ +CS L GKQVHA + K G S ++ AL+DMY+K L ++ + F
Sbjct: 120 FTFPFVIKSCSGLVCYNLGKQVHAHLCKFGPKSNITMENALIDMYTKCASLLDAHKVFDG 179
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D ++WN+++S + G ++A +F M
Sbjct: 180 MVERDAISWNSIISGHVGVGQMRKAGALFDLM 211
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 17 SIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
SI +AL + Y +Q+FD++S GD+ S ++ + LF M
Sbjct: 287 SICNALMEMYSKCGCIGQAYQLFDQMSKGDVISWSTMIGGLANHGKAREAIELFKRMKKA 346
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLG 128
+ TF +L AC+ G M K EP V+ L+D+ + G L
Sbjct: 347 KIEPNGITFLGLLSACAHAGFWNEGLAYFDSMSK-DYHIEPEVEHYGCLVDILGRAGRLS 405
Query: 129 ESVEAFKEIEFK-DVVTWNALLSSFLRH 155
++++ +++ K D W +LLSS H
Sbjct: 406 QALDVIEKMPMKPDSKIWGSLLSSCRTH 433
>gi|148906116|gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 8/154 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI DA +VFD++ +L S + + Y + +F M +
Sbjct: 161 CGSIEDA--------RRVFDKMCERNLVSWTAMVSGYAQGGFADEALRMFYEMQGEDVKA 212
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T VL AC+ L ++GK++H +I+ G D VV AL+DMY+K G +G + + F
Sbjct: 213 NYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCGSIGSAQKVF 272
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ +DVV+WN ++ + ++G E +F+ M
Sbjct: 273 DKMLQRDVVSWNVAIAGYAQNGRFDECMELFRKM 306
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSALPA 91
FD ++ GD+ N + Y + L+ M + N YT++ VL AC+ L +
Sbjct: 69 FDNMTKGDVFPWNVMIGGYVKHGETREALELYHQMQKVSSTNPDNYTYSSVLNACARLAS 128
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK ++ +I G + + +V+ AL++M+ K G + ++ F ++ +++V+W A++S
Sbjct: 129 LSEGKLIYDEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVSWTAMVSG 188
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + G A EA +F M E V+
Sbjct: 189 YAQGGFADEALRMFYEMQGEDVK 211
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 60 TWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
+AL C+ S+ L L C+ KQVHA M+ G P V+T L++
Sbjct: 5 VFALHCHPRSSLL----------LHLCTKAKTLAEAKQVHAHMLLTGILRIPSVETKLLN 54
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+Y K G L ++ AF + DV WN ++ +++HG +EA ++ M +
Sbjct: 55 LYVKCGSLPDARLAFDNMTKGDVFPWNVMIGGYVKHGETREALELYHQMQK 105
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ + N+ + +Y ++ T LF M + + T VL AC+A+ A + GK++H
Sbjct: 314 DVITWNTLITAYAQNGYGDQTLELFQQMQLRGVKPNSITIASVLSACAAVSALQEGKRIH 373
Query: 100 ALMIKGGTDSEPVVKTALMDM 120
L+ + S+ V AL+DM
Sbjct: 374 DLVNRSECKSDICVGNALIDM 394
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Query: 62 ALFCY--MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
ALF Y M + + YTF ++ ACS L A E+G+Q+HA ++K +P V T+L+D
Sbjct: 1223 ALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFVMTSLVD 1282
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
MY+K G + ++ FK + + +WNA++ +HG AKEA F+ M V
Sbjct: 1283 MYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGV 1336
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL+S N+ + Y S +FP L+ M + T A L ++GKQ+H
Sbjct: 1102 DLASWNAIMHGYIVSGDFPKALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQGKQIH 1161
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A+++K G + + V + ++DMY K G + + F EI D V W ++S + +G +
Sbjct: 1162 AVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVENGQEE 1221
Query: 160 EAFGVFQAMTRERVE 174
A + M +V+
Sbjct: 1222 HALFTYHQMRLSKVQ 1236
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 7/148 (4%)
Query: 16 ISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ + L YV VF +++ DL S N+ + T S + +F ++
Sbjct: 970 VSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLR 1029
Query: 70 TCLNLTAYTFTPVLGACSALPAPER-GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
L +T VL ACS+L Q+HA +K G + V TAL+D+YSK G +
Sbjct: 1030 DSLLPDQFTVASVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKME 1089
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHG 156
E+ F + D+ +WNA++ ++ G
Sbjct: 1090 EAEFLFVNQDGFDLASWNAIMHGYIVSG 1117
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 55/108 (50%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF + + ++ T +T PV C +P + +H +K G + V AL+++Y+
Sbjct: 747 LFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIGLQWDVFVAGALVNIYA 806
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
K+GL+ E+ F + +DVV WN ++ +++ L EA +F R
Sbjct: 807 KFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHR 854
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%)
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M ++ + TF +L + L E GKQ+H ++++ G D V L++MY K
Sbjct: 923 FVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVK 982
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
G + + F ++ D+++WN ++S GL + + G+F + R+
Sbjct: 983 AGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRD 1030
Score = 42.7 bits (99), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSF 152
GK+ HA ++ G + V L+ MY+K G L + + F +D+VTWNA+LS+
Sbjct: 675 GKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSAL 734
Query: 153 LRHG-LAKEAFGVFQAMTRERV 173
H + + F +F+ + R V
Sbjct: 735 AAHADKSHDGFHLFRLLRRSVV 756
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
P +VFDEI D +S NS L ++ + PA W L MH+ + +
Sbjct: 38 PLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGAHPAAWCLLRAMHAQGVAANTFALGSS 97
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L + +A P G Q+ +L K G +AL+ MY+K G + ++ F + ++
Sbjct: 98 LRSAAAARCPALGAQLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNT 157
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WNAL++ ++ G +A +F M ER+
Sbjct: 158 VSWNALIAGYVESGKVLQALELFINMETERL 188
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD + D S NS L Y++ F M S + Y F+ L +CS L
Sbjct: 352 KCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELA 411
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G+Q+H +I G S V ++L+ MYSK G+L ++ ++F+E + V WN+++
Sbjct: 412 VLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIF 471
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +HG A +F M +V
Sbjct: 472 GYAQHGHAHIVHSLFNEMVELKV 494
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 79/154 (51%), Gaps = 14/154 (9%)
Query: 29 THQVFDEISHG-DLSSLNSQLFSYT-RSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ ++FD+I DL S N+ L +YT ++ A + + + L Y+FT ++ C
Sbjct: 245 SRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTC 304
Query: 87 SALPAPE----RGKQVHALMIKGGTDSEPVVKTALMDMYSKYG---LLGESVEAFKEIEF 139
PE +G+ +H L+IK G + V AL+ MY++ ++ ++ + F +
Sbjct: 305 -----PEHDDHQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLI 359
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
KD V+WN++L+ + +H L+ +A F+ M +
Sbjct: 360 KDTVSWNSMLTGYSQHNLSADALRFFRCMQSANI 393
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 6/144 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + + S N+ + Y S LF M + L TF +L +A
Sbjct: 147 RVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVPDEATFAALL---TAFD 203
Query: 91 APER--GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNA 147
Q+H ++K G+ V A + YS+ G L ES F +I + +D+++WNA
Sbjct: 204 DSNYFLMHQLHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIFDQIGDSRDLISWNA 263
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
+L ++ HG+ +A G F M RE
Sbjct: 264 MLGAYTYHGMDYDAMGFFVRMIRE 287
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+E G NS +F Y + + +LF M + L TF ++ +CS
Sbjct: 455 FEEADKGSSVPWNSMIFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLV 514
Query: 93 ERGKQV-HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
+ G ++ +A+ + G +D+Y + G L ++ E + F+ D + W LL
Sbjct: 515 DEGSEILNAMETRYGIPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLG 574
Query: 151 SFLRHG 156
+ HG
Sbjct: 575 ACRIHG 580
>gi|255566945|ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536243|gb|EEF37895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEI D+ S N+ + YT+S F F M + T VL AC+
Sbjct: 211 ELFDEIPVRDVVSWNAMIAGYTQSGRFEEALIFFEEMLRANVTPNMSTLLSVLSACAQSG 270
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G V + + + G +S V AL+DMY+K G L ++ F+ I+ K+V++WN ++
Sbjct: 271 SLKMGNWVSSWIEEHGLESNIKVMNALIDMYAKCGDLENALHLFEGIKNKNVISWNVMIG 330
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ KEA G+F+ M + VE
Sbjct: 331 GYTHLSCYKEALGLFRQMLQSNVE 354
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F+ I + ++ S N + YT + LF M + + T +L AC+ L
Sbjct: 312 HLFEGIKNKNVISWNVMIGGYTHLSCYKEALGLFRQMLQSNVEPNDVTLLSILPACANLG 371
Query: 91 APERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A GK +HA + K + + + T+L+DMY+K G + + + F + K + +WNA++
Sbjct: 372 ALGLGKWIHAYIDKNMKNLANNALWTSLIDMYAKCGNIEVANQIFDGMNPKSLASWNAMI 431
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S F HG A A +F MT+E
Sbjct: 432 SGFAMHGQADLAISLFSRMTKE 453
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 31/138 (22%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M S+ YT+ VL +C+ + + GKQ+H ++K G D++ V T+L+ MY + G
Sbjct: 115 MISSGFTPNTYTYPFVLKSCARISSTHEGKQIHGQILKLGFDNDAFVHTSLITMYVQNGE 174
Query: 127 LG-------------------------------ESVEAFKEIEFKDVVTWNALLSSFLRH 155
LG +++E F EI +DVV+WNA+++ + +
Sbjct: 175 LGNARLVFERSSMRDVVSYTALITGYASRGFLDQALELFDEIPVRDVVSWNAMIAGYTQS 234
Query: 156 GLAKEAFGVFQAMTRERV 173
G +EA F+ M R V
Sbjct: 235 GRFEEALIFFEEMLRANV 252
>gi|255583926|ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527557|gb|EEF29678.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 679
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 13/151 (8%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-------------STCLNLTAYT 78
+FD + D+ S N+ + Y S + + M C + T
Sbjct: 442 IFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHANEGINKHDGDKQACFKPNSIT 501
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
VL C++L A +GK++HA ++ SE V +AL+DMY+K G L S F ++
Sbjct: 502 LMTVLPGCASLAALAKGKEIHAYAVRNALASEVTVGSALVDMYAKCGCLNLSRRVFDQMP 561
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
K+V+TWN ++ ++ HG +EA +F+ M
Sbjct: 562 IKNVITWNVIVMAYGMHGNGEEALELFKDMV 592
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++VFD I+ DL S NS + ++ R++ + F +M + L +++T + ACS
Sbjct: 132 VYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLEPSSFTLVSPVIACSN 191
Query: 89 LPAPER---GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
L E GKQ+H + G S ALM MY+ G L ++ FK E +++++W
Sbjct: 192 LRKHEGLRLGKQIHGYCFRNGHWS-TFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISW 250
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
N ++SSF ++ EA + M E V+
Sbjct: 251 NTMISSFSQNERFVEALMSLRYMVLEGVK 279
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 52 TRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEP 111
TRS F + + M + ++ +Y F VL A + L GKQ+HA ++K G +S
Sbjct: 53 TRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHVVKYGYESSS 112
Query: 112 V-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
V + +L++ Y K L + + F I +D+V+WN+L+S+F R + A F+ M
Sbjct: 113 VAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLA 172
Query: 171 ERVE 174
E +E
Sbjct: 173 EDLE 176
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHST---CLNLTAY-TFTPVLGAC 86
+VFD I N+ + Y ++ + LF M + C N T + P C
Sbjct: 339 RVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARC 398
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + E +H +IK + + V+ ALMDMYS+ + S F +E +D+V+WN
Sbjct: 399 ESFFSKE---SIHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWN 455
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+++ ++ G +A + M
Sbjct: 456 TMITGYVISGCYNDALLMLHEM 477
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
+L S N+ + S++++ F YM + T VL ACS L GK++H
Sbjct: 246 NLISWNTMISSFSQNERFVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIH 305
Query: 100 ALMIKGGTDSE-PVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
A ++ G E V +AL+DMY G +G F I + WNA+++ + ++
Sbjct: 306 AYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHD 365
Query: 159 KEAFGVFQAMT 169
++A +F M
Sbjct: 366 EKALMLFIEMV 376
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 81/170 (47%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF 64
+R N + + + A ++FD + D+ S S + Y+++ F LF
Sbjct: 278 MRERNIVSWNALVMGHAKVGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLF 337
Query: 65 CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY 124
M + + T VL AC+ L + G VH + + G ++ V +L+DMY K
Sbjct: 338 QEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKC 397
Query: 125 GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G++ +++E F ++ KD V+W +++S +G A A +F M RE V+
Sbjct: 398 GMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQ 447
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H VF++I L N + ++S + ++ MH + T + AC+ +
Sbjct: 70 HLVFNQIECPTLVVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARV 129
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+++H +K G +S V AL+ MY+ G LG + + F + +D+V+WN L+
Sbjct: 130 SDIVSGRKIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLI 189
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ KE +F AMT ++
Sbjct: 190 CGYSQYNKYKEVLRLFDAMTAANIK 214
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD + DL S N+ + Y++ + LF M + + A T ++ ACS
Sbjct: 169 FAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACS 228
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E + + + + + + L+DMY + L + F + +++V+WNA
Sbjct: 229 HLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRRSLAELAQGVFDRMRERNIVSWNA 288
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
L+ + G A +F M + V
Sbjct: 289 LVMGHAKVGNLTAARKLFDNMPKRDV 314
>gi|449513257|ref|XP_004164277.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 558
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 85/157 (54%), Gaps = 6/157 (3%)
Query: 16 ISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNL 74
+S A P+ Y VF I D + N+ + S+ SR FP+ + + F M S + L
Sbjct: 28 LSCVAAAPESLSYARYVFSRIPSPDTIAYNTIIRSH--SRFFPSHSLSYFFSMRSNGIPL 85
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+TF VL ACS L + +H+L++K G S+ V+ AL+ +Y G L +V+ F
Sbjct: 86 DNFTFPFVLKACSRL---QINLHLHSLIVKYGLGSDIFVQNALICVYGYCGSLEMAVKVF 142
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E+ +D V+W+ +++SFL +G A EA +F+ M E
Sbjct: 143 DEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLE 179
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSAL 89
+VFDE+S D S ++ + S+ + LF M + T V+ A S L
Sbjct: 140 KVFDEMSERDSVSWSTVIASFLNNGYASEALDLFEKMQLEDKVVPDEVTMLSVISAISHL 199
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E G+ V A + + G + TAL+DM+S+ G + ES+ F+++ ++V+TW AL+
Sbjct: 200 GDLELGRWVRAFIGRLGFGVSVALGTALIDMFSRCGSIDESIVVFEKMAVRNVLTWTALI 259
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ HG + EA +F +M + V+
Sbjct: 260 NGLGIHGRSMEALAMFHSMRKSGVQ 284
>gi|224057531|ref|XP_002299253.1| predicted protein [Populus trichocarpa]
gi|222846511|gb|EEE84058.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF I + ++ +LN + + + FC M + YTF+ VL A L
Sbjct: 82 VFKRIRNPNVFALNWMVLASAFEGYYKEAIGYFCSMKDSVFIYNKYTFSIVLKAFVGLLD 141
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+GK+VH+++ + G +S+ V AL+DMYSK G +G + F + +D+V+W +++S
Sbjct: 142 LNKGKEVHSMVKQLGFESDVCVANALVDMYSKCGCIGYARTVFDRMAKRDIVSWTSMISG 201
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ G +EA +F+ M E +E
Sbjct: 202 YCNVGKIEEALVLFERMKLEGLE 224
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + N+ + + + + LF M + T +L AC + + +RG+ +H
Sbjct: 261 DLVTWNAMIAGFVQGERAGDAFKLFQDMLVLGVKPNLVTVAGLLPACGMVSSIQRGRAIH 320
Query: 100 ALMIKGGTD-SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
L+ + D S + +AL+DMYS+ G E+ F++I K+V +WNA++ + +HG+
Sbjct: 321 GLVYRLEFDISNAFIASALIDMYSECGSFKEARTVFEKIHNKNVASWNAMIGCYGKHGMV 380
Query: 159 KEAFGVFQAMTRERVE 174
+ +F+ M E ++
Sbjct: 381 NTSIQLFERMHGEGIQ 396
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESV 131
N++ +L C GKQVHA ++ GTD + + + L+ MY+ G + +
Sbjct: 21 NISLDPIAGLLKQCLKFKTLRGGKQVHAWLVTRGTDLRILSLNSKLVGMYASCGDVKSAT 80
Query: 132 EAFKEIEFKDV--VTWNALLSSFLRHGLAKEAFGVFQAM 168
FK I +V + W L S+F G KEA G F +M
Sbjct: 81 LVFKRIRNPNVFALNWMVLASAF--EGYYKEAIGYFCSM 117
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF++I + +++S N+ + Y + + LF MH + T VL ACS
Sbjct: 355 VFEKIHNKNVASWNAMIGCYGKHGMVNTSIQLFERMHGEGIQANDVTLLCVLSACSHSGY 414
Query: 92 PERGKQVH-ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
E+G ++ ++ + D + ++DM S+ G L ++ E KE+
Sbjct: 415 VEKGLEIFWSMKERYMVDRKKEHYACVVDMLSRSGRLVDAYELVKEM 461
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 19 ADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STC 71
+AL YV Q VF E+ D S NS + LF M S+
Sbjct: 242 GNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQTSSG 301
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + T VL AC++L A + G+ VH ++ G + + TA++DMY+K G + ++
Sbjct: 302 IKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ F I K+V TWNALL HG E+ F+ M +
Sbjct: 362 KIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVK 400
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA--- 133
+TF PV AC GKQ+H + K G + V+ +L+ YG+ GES A
Sbjct: 107 FTFPPVFKACGKFSGIREGKQIHGTVTKMGFYDDIYVQNSLVHF---YGVCGESRNACKV 163
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F ++ +DVV+W +++ F R GL KEA F M E
Sbjct: 164 FDQMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE 201
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ S + +TR+ + F M + T+ L + +
Sbjct: 162 KVFDQMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCALVSSGRVG 218
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK +H L++K + AL+DMY K L +++ F E++ KD V+WN+++S
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMIS 278
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + EA +F M
Sbjct: 279 GLVHCERSNEAIELFSMM 296
>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g09950
gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 995
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D + NS + Y + L +M T L ++ + VL A +++ ERG +VH
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A ++ +S+ VV +AL+DMYSK G L ++ F + ++ +WN+++S + RHG +
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 160 EAFGVFQAM 168
EA +F+ M
Sbjct: 703 EALKLFETM 711
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFDE+ + S + Y+R+ M + Y F VL AC
Sbjct: 53 VSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112
Query: 87 SALPAPER--GKQVHALMIKGGTDSEPVVKTALMDMYSK-YGLLGESVEAFKEIEFKDVV 143
+ + G+Q+H LM K + VV L+ MY K G +G ++ AF +IE K+ V
Sbjct: 113 QEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSV 172
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+WN+++S + + G + AF +F +M
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSM 197
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 16 ISIADALPKRYVYT------HQVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMH 68
+S+++AL Y T ++F + D S NS + + RS R+ P F
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
L TF+ VL A S+L E GKQ+H L +K E + AL+ Y K G +
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569
Query: 129 ESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGV--FQAMTRERVE 174
+ F + E +D VTWN+++S ++ + L +A + F T +R++
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C SIADA +VF ++ D S NS + ++ F +
Sbjct: 355 LVNMYAK-CGSIADA--------RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + ++T L +C++L + G+Q+H +K G D V ALM +Y++ G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLR 154
L E + F + D V+WN+++ + R
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALAR 493
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF+++ + +LN + R + LF M+S ++++ ++ +L +
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFP 319
Query: 88 ALPAPE-----RGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
E +G++VH +I G D + L++MY+K G + ++ F + KD
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WN++++ ++G EA +++M R +
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
>gi|255546963|ref|XP_002514539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546143|gb|EEF47645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 332
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 61/97 (62%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
TF V+ +CS L +G+Q+HA +IK G S V ++L+ MYS+ G L +SV+ F E
Sbjct: 192 TFASVISSCSELTTLGQGQQIHAEVIKAGASSVVAVTSSLISMYSRCGCLEDSVKVFLEC 251
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ DV+ W+++++++ HG +EA +F M +E +E
Sbjct: 252 KDVDVILWSSMIAAYGFHGRGEEAIKLFHQMEQENLE 288
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 7/167 (4%)
Query: 8 TNFPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATW 61
+ P + +S + L Y+++ ++ FDE+ ++++ N+ + +
Sbjct: 16 NSMPMRNIMS-CNILINAYIHSGELDSARNLFDEMPERNVATWNAVVAGLIQFEINEEGL 74
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LF M+ YT VL C+ L + G+QVH ++K G + VV ++L MY
Sbjct: 75 NLFRDMYELGFLPDEYTLGSVLRGCAGLKSMYAGRQVHCYVVKCGFEFNLVVGSSLAHMY 134
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K G L E K + +++V WN L++ ++G ++E ++ M
Sbjct: 135 MKSGSLSEGERVIKSMPSRNIVAWNTLIAGKSQNGHSEEVLDLYNMM 181
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D+ + ++ + YT++ ALF M + T VL AC+ L
Sbjct: 276 RLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAVLG 335
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GK VH+ + + ++ TAL+D Y+K G + ++VEAF+ + K+ TW AL+
Sbjct: 336 ALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 395
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+G +EA +F +M + +E
Sbjct: 396 GMATNGRGREALELFSSMRKASIE 419
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + N+ + +Y ++ N+ +F M + T V+ AC +
Sbjct: 176 LFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGD 235
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ GK V + + G + TAL+DMY+K G LG++ F ++ +DVV W+A++S
Sbjct: 236 AKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISG 295
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + +EA +F M VE
Sbjct: 296 YTQADQCREALALFSEMQLAEVE 318
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T L +CS + + G+ + A +K G ++ V ++L+ MY+ + + F
Sbjct: 120 HTVACALKSCSRMCTLDVGRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDA 179
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+E VV WNA++++++++G E +F+ M V F
Sbjct: 180 VEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLEVGVAF 218
>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
Length = 861
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S NS + Y LF M + +T+ VL C+ L + GKQ+HA +
Sbjct: 528 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 587
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
IK S+ + + L+DMYSK G L +S F++ +D VTWNA++ + HG +EA
Sbjct: 588 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 647
Query: 163 GVFQAMTRERVE 174
+F+ M E ++
Sbjct: 648 QLFERMILENIK 659
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + Y++ + LF + S+ L + + V AC+ +
Sbjct: 296 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 355
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q++ L IK + V A +DMY K L E+ F E+ +D V+WNA++++
Sbjct: 356 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 415
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++G E +F +M R R+E
Sbjct: 416 HEQNGKGYETLFLFVSMLRSRIE 438
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S NS L Y ++ + +F M + TF +L CS L G Q+H
Sbjct: 102 DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH 161
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++++ G D++ V +AL+DMY+K ES+ F+ I K+ V+W+A+++ +++ L
Sbjct: 162 GIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 221
Query: 160 EAFGVFQAMTR 170
A F+ M +
Sbjct: 222 LALKFFKEMQK 232
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D S N+ + ++ ++ T LF M + + +TF +L AC+
Sbjct: 396 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-G 454
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE----------------SVEAF 134
+ G ++H+ ++K G S V +L+DMYSK G++ E ++E
Sbjct: 455 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 514
Query: 135 KEIEFKDV----VTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ K + V+WN+++S ++ +++A +F M
Sbjct: 515 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 552
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A KR+V + +VF I + S ++ + ++ F M ++ +
Sbjct: 184 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 243
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL +C+AL G Q+HA +K ++ +V+TA +DMY+K + ++ F E
Sbjct: 244 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 303
Query: 141 DVVTWNALLSSF 152
+ ++NA+++ +
Sbjct: 304 NRQSYNAMITGY 315
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 31/121 (25%)
Query: 86 CSALPAPERGKQVHALMIKGG---------------TDSEPVVKTAL------------- 117
C+ A E GKQ HA MI G T+S V ++
Sbjct: 16 CAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSW 75
Query: 118 ---MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ YSK + ++ F + +DVV+WN++LS +L++G + ++ VF M RE +E
Sbjct: 76 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIE 135
Query: 175 F 175
F
Sbjct: 136 F 136
>gi|68611229|emb|CAE03043.3| OSJNBa0084A10.18 [Oryza sativa Japonica Group]
Length = 729
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 60/93 (64%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T + V+ C++L + GK VH IK G + + +V ++L+ MYSK GL+ E+ + F+ I
Sbjct: 377 TLSVVISICASLVSLGCGKMVHLWAIKTGFEHDALVMSSLISMYSKCGLISEASQVFELI 436
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+D VTWNA+++++ HGLA EA VF MT+
Sbjct: 437 LQRDTVTWNAMIATYAYHGLADEALKVFDMMTK 469
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 108 DSEPVVKT----ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
D+ PV + AL+ Y++ G + E+ E F I ++VV+WNA++S + R+G+ K A
Sbjct: 89 DAMPVRNSVSWAALLTGYARCGRVAEARELFNRIPDRNVVSWNAMVSGYARNGMVKRARE 148
Query: 164 VFQAM 168
+F M
Sbjct: 149 LFDMM 153
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 28/131 (21%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL--PAPERGKQVHALMIKG 105
LF ++RN P +W + +T Y +G L PE+
Sbjct: 211 LFGQMQTRN-PVSWNVM---------ITGYARAGSMGIAQRLFDEMPEK----------- 249
Query: 106 GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
+ + +TA+M Y + G + + + FK++ +D V WN ++ F+R+ +A +F
Sbjct: 250 ----DVLSRTAIMRGYLQNGSVDAAWKVFKDMPHRDTVAWNTMMDGFVRNDRLDDALKLF 305
Query: 166 QAM-TRERVEF 175
M R+++ +
Sbjct: 306 SEMPDRDQISW 316
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ DL NS Y + LF + + +TF ++ A L +
Sbjct: 511 VFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLAS 570
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G++ H ++K G + P + AL+DMY+K G ++ +AF +DVV WN+++SS
Sbjct: 571 LQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ HG ++A + + M E +E
Sbjct: 631 YANHGEGRKALQMLEKMMCEGIE 653
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
Y + VL ACS LP E GKQ+HA +++ G + + + L+D Y K G + + + F
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFD 308
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ K++++W LLS + ++ L KEA +F +M +
Sbjct: 309 GMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPK 343
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 3/142 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++FD + + ++ S + L Y ++ LF M L + + +L +C++L
Sbjct: 304 HKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASL 363
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E G QVHA IK ++ V +L+DMY+K L E+ + F DVV +NA++
Sbjct: 364 HALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMI 423
Query: 150 SSFLRHGLAKE---AFGVFQAM 168
+ R G E A +F M
Sbjct: 424 EGYSRLGTQWELHDALNIFHDM 445
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 9/148 (6%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL------FCYMHSTCLNLTAYTFTPVLG 84
+VFD + D+ N+ + Y+R W L F M + + TF +L
Sbjct: 406 KVFDIFAADDVVLFNAMIEGYSR---LGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLR 462
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A ++L + KQ+H LM K G + + +AL+ +YS L +S F E++ KD+V
Sbjct: 463 ASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVI 522
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRER 172
WN++ S +++ +EA +F + R
Sbjct: 523 WNSMFSGYVQQSENEEALNLFLELQLSR 550
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 43/75 (57%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VH +I G + + + LM++YS+ G + + + F+++ +++VTW+ ++S+ HG
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 158 AKEAFGVFQAMTRER 172
+E+ VF R R
Sbjct: 126 YEESLVVFLDFWRTR 140
Score = 42.0 bits (97), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 1/128 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+ FD + D+ NS + SY + M + TF VL ACS
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHA 669
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD-VVTWNAL 148
E G + LM++ G + E ++ + + G L E+ E +++ K + W +L
Sbjct: 670 GLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSL 729
Query: 149 LSSFLRHG 156
LS + G
Sbjct: 730 LSGCAKAG 737
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 65/150 (43%), Gaps = 3/150 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGA 85
VY +VF+++ +L + ++ + + + + +F T N Y + + A
Sbjct: 96 VYARKVFEKMPERNLVTWSTMVSACNHHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQA 155
Query: 86 CSALPAPERGK--QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
CS L R Q+ + ++K D + V T L+D Y K G + + F + K V
Sbjct: 156 CSGLDGSGRWMVFQLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTV 215
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
TW ++S ++ G + + +F + V
Sbjct: 216 TWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D+ S S + Y+++ F LF M + + T VL AC+ L
Sbjct: 181 KLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLG 240
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G VH + + G ++ V +L+DMY K G++ +++E F ++ KD V+W +++S
Sbjct: 241 KLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVIS 300
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+G A A +F M RE V+
Sbjct: 301 GLAVNGFANSALDLFSQMLREGVQ 324
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 69/147 (46%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD + DL S N+ + Y++ + LF M + + A T ++ ACS
Sbjct: 77 FAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACS 136
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L E + + + + + + L+DMY + G L + + F + +DV++W +
Sbjct: 137 HLGDWEFADSMVKYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTS 196
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ + + +A +FQ M +V+
Sbjct: 197 MITGYSQASQFSDAVKLFQEMMAAKVK 223
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V+ + + A +H +K G +S V AL+ MY+ G LG + + F + +D
Sbjct: 30 VVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRD 89
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+V+WN L+ + ++ KE +F AMT ++
Sbjct: 90 LVSWNTLICGYSQYNKYKEVLRLFDAMTAANIK 122
>gi|297736355|emb|CBI25078.3| unnamed protein product [Vitis vinifera]
Length = 494
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 87/172 (50%), Gaps = 11/172 (6%)
Query: 5 IRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNF-PATWAL 63
IR+ N A S+ D R FD+I D+ + NS + +Y R+ +F A
Sbjct: 86 IRLVNLYA----SLGDVSLSR-----GTFDQIQRKDVYTWNSMISAYVRNGHFREAIDCF 136
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAP-ERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+ + T YTF PVL AC L +H +IK G + E V AL++MY+
Sbjct: 137 YQLLLVTKFQADFYTFPPVLKACQTLLGDISTATLIHLYVIKHGLEFELFVSNALINMYA 196
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K+G LG++ + F+++ +DVV+WN++++++ ++ A G F M +E
Sbjct: 197 KFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLE 248
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTC--LNLTAYTFTPVLGAC 86
H+VF+ I D+ S N+ + YT+ N A+ A+ Y M C + L T+ +L A
Sbjct: 284 HKVFNLIPVKDVVSWNTLISGYTQ--NGLASEAIEVYRMMEECREIKLNQGTWVSILAAY 341
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + A ++G ++H +IK + V T L+D+Y K G L +++ F ++ + V WN
Sbjct: 342 AHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRESSVPWN 401
Query: 147 ALLSSF 152
A++S +
Sbjct: 402 AIISYY 407
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
K++HAL++ G + L+++Y+ G + S F +I+ KDV TWN+++S+++R
Sbjct: 66 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 125
Query: 155 HGLAKEAFGVF 165
+G +EA F
Sbjct: 126 NGHFREAIDCF 136
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
+ F I KDVV+WN L+S + ++GLA EA V++ M R
Sbjct: 285 KVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECR 325
>gi|168044100|ref|XP_001774520.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674075|gb|EDQ60588.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 350
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 85/160 (53%), Gaps = 8/160 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C S+ DA ++F+++ D+ + + Y ++ + +ALF M T L
Sbjct: 186 CESLLDA--------RKMFNKLPRKDIGLWTTMIAGYAQTDHGEEAFALFQAMRDTGLQP 237
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
TF +L AC+ ++GK +H + G DS+ V TAL++ YSK L ++ + F
Sbjct: 238 NKMTFLALLKACTRPEFLQKGKWLHNHIRCAGLDSDEKVGTALINAYSKCRSLVDARKVF 297
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++V++W AL++++ R+ A+EA +F+ M RE V+
Sbjct: 298 DNLCTRNVISWTALIAAYSRNDRAEEALDLFEQMKREGVQ 337
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 71/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF + + D+ N+ + Y ++ +F M L +F +L +C+
Sbjct: 92 HRVFKRVQNRDIIVWNAMIEGYCQAGLRDKALEMFKDMKIAGLAPDVASFLSILKSCNGS 151
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQ+H +I+ G + V+TAL++MY + L ++ + F ++ KD+ W ++
Sbjct: 152 VHLDDGKQLHKAIIESGFELSVRVQTALVNMYCRCESLLDARKMFNKLPRKDIGLWTTMI 211
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + + +EAF +FQAM
Sbjct: 212 AGYAQTDHGEEAFALFQAM 230
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 61/129 (47%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
+L S N+ + + A F M + TF +L A E G++VH
Sbjct: 1 NLISCNAAISRLAQQGRRGEALAFFFRMQDEHVRPNRVTFLSLLKAFRGPGDLESGRRVH 60
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+++ +S+ V TAL MY + G ++ FK ++ +D++ WNA++ + + GL
Sbjct: 61 NFILERQLESDVRVGTALTCMYFRCGSALDAHRVFKRVQNRDIIVWNAMIEGYCQAGLRD 120
Query: 160 EAFGVFQAM 168
+A +F+ M
Sbjct: 121 KALEMFKDM 129
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VFD+I ++ S + + Y F +F + L ++T VL AC+ L
Sbjct: 167 HKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQL 226
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G+ +H +++ G V T+L+DMY+K G + ++ F + KD+V+W A++
Sbjct: 227 GDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMI 286
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ +GL KEA +F M RE V+
Sbjct: 287 QGYALNGLPKEAIDLFLQMQRENVK 311
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 70/139 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + D+ S + + Y + LF M + YT VL AC+ L A
Sbjct: 270 VFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGA 329
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G+ V L+ + PV+ TAL+D+Y+K G + + E FK ++ KD V WNA++S
Sbjct: 330 LELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISG 389
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+G K +FG+F + +
Sbjct: 390 LAMNGYVKISFGLFGQVEK 408
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 76/141 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
YT +F +I ++ N+ + + F + M S +TF VL AC+
Sbjct: 64 YTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEGFLPNNFTFPFVLKACA 123
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G ++H L++KGG D + VKT+L+ +Y+K G L ++ + F +I K+VV+W A
Sbjct: 124 RLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTA 183
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S ++ G +EA +F+ +
Sbjct: 184 IISGYIGVGKFREAIDMFRRL 204
>gi|255564603|ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537384|gb|EEF39012.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 353
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H++ D I ++ N + +Y+ ++++ M S +TFT + AC+
Sbjct: 34 YAHKLIDLIPSPNVFLYNKLIQAYSFQNQLHQCFSIYSQMRSRNCTGNQHTFTFLFAACA 93
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ +P + +H K G +S+ + TAL+DMY K G++ + F EI +D+ TWNA
Sbjct: 94 SFFSPLHAQMLHTHFKKSGFESDVIALTALVDMYCKLGMVAFAHRVFDEIPVRDIPTWNA 153
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
L++ + R G + A +F+ M V
Sbjct: 154 LIAGYSRCGDMEGALKIFKLMPDRNV 179
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 75/180 (41%), Gaps = 34/180 (18%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-------------------- 67
+ H+VFDEI D+ + N+ + Y+R + +F M
Sbjct: 135 FAHRVFDEIPVRDIPTWNALIAGYSRCGDMEGALKIFKLMPDRNVVSWTAMISGYSQNGR 194
Query: 68 HSTCLNL------------TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKT 115
++ L L T +L AC+ L A E G ++ + G V
Sbjct: 195 YAKALELFLKMEKENGLRPNEVTIASILPACANLGALEVGDRIETYARENGLLRNLYVSN 254
Query: 116 ALMDMYSKYGLLGESVEAFKEI--EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
AL++MY++ G + + + F +I + +++ +WN+++ HG + +A ++ M E +
Sbjct: 255 ALLEMYARCGKIDMARKVFDKIIGKRRNLCSWNSMIMGLAIHGRSHDALHLYNRMLIEGI 314
>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 77/142 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+E+ + S ++ + Y + + +F M + + + VL AC+ L
Sbjct: 248 ELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLG 307
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A ++G+ +HA + + V+ TAL+DMY+K G L + + F+++E K+V TWNA++
Sbjct: 308 ALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWNAMIC 367
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
HG A++A +F M +++
Sbjct: 368 GLGMHGRAEDAIELFFKMQKQK 389
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T+ + AC+A A E G QVHA +IK G + +++A + MY +G + + E
Sbjct: 131 FTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRMLGE 190
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
DV+ +NA++ +L+ G + A +F +M + V
Sbjct: 191 DGNSDVICFNAMIDGYLKCGEVEAAKELFWSMEDKNV 227
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+K G++ E+ E F E++ K+ ++W+A++ +++ G KEA VF M RE +
Sbjct: 238 AKCGMIEEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEI 289
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD+++ DL S S + Y + T F M S+ + + VL AC L A
Sbjct: 875 VFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGA 934
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+G+ H+ +I+ G + + +V TA+MDMYSK G L + F E KD+V W+A+++S
Sbjct: 935 LRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIAS 994
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG ++A +F M + V
Sbjct: 995 YGIHGHGRKAIDLFDQMVKAGV 1016
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 2/141 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSAL 89
+VFDE H ++ NS L SY R + + T LF M T +T L AC+ L
Sbjct: 57 KVFDETPHPNVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGL 116
Query: 90 PAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E GK +H K S+ V +AL+++YSK G +GE+++ F+E + D V W ++
Sbjct: 117 RMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSM 176
Query: 149 LSSFLRHGLAKEAFGVFQAMT 169
++ + ++ +EA +F M
Sbjct: 177 VTGYQQNNDPEEALALFSQMV 197
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F ++ D+ S ++ + Y + LF M + T L AC+
Sbjct: 262 NLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSR 321
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK++H + + G + + V TAL+DMY K E+V+ F+ + KDVV+W ALLS
Sbjct: 322 NLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVSWVALLS 381
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G+A ++ GVF+ M + ++
Sbjct: 382 GYAQNGMAYKSMGVFRNMLSDGIQ 405
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F + D+ S + L Y ++ + +F M S + A +L A S L
Sbjct: 363 DLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELG 422
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++ +H +++ G +S V +L+++YSK G LG++V+ FK + +DVV W+++++
Sbjct: 423 IFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIA 482
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ HG EA +F M +
Sbjct: 483 AYGIHGRGGEALEIFDQMVKN 503
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VF+E D S + Y ++ + ALF M C+ L T V+ AC+ L
Sbjct: 160 KVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQL 219
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G VH L+I+ D + + +L+++Y+K G + F ++ KDV++W+ ++
Sbjct: 220 LNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMI 279
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ + + A EA +F M +R E
Sbjct: 280 ACYANNEAANEALNLFHEMIEKRFE 304
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF++I + N + + F ++ L+ M L + F L +C+ L
Sbjct: 774 VFEDIPNPCSFLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSD 833
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+RGK +H ++ G ++ V AL+DMY+K G + + F ++ +D+V+W +++S
Sbjct: 834 LQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISG 893
Query: 152 FLRHGLAKEAFGVFQAM 168
+ +G E G F M
Sbjct: 894 YAHNGYNSETLGFFDLM 910
Score = 39.7 bits (91), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 2/126 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FDE + DL ++ + SY + LF M + + TFT VL ACS
Sbjct: 976 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
E GK LM + + + A M D+ + G L E+V+ + + + D W +LL
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095
Query: 150 SSFLRH 155
+ H
Sbjct: 1096 GACRIH 1101
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + + Y + LF ++S + TFT ++ A S L
Sbjct: 167 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 226
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GKQVHAL+++ ++ +L+DMYSK G L S F + + VV+WNA+L
Sbjct: 227 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ RHGL E +F+ + +E
Sbjct: 287 GYGRHGLGHEVISLFKDLHKE 307
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
V D + + S + + Y+++ LF M YT VL +CS
Sbjct: 66 NVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQ 125
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +GKQVH+L++K +S V ++L+DMY+K + E+ F + +DVV+ A++S
Sbjct: 126 SIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIIS 185
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + GL +EA +F+ + E ++
Sbjct: 186 GYAQKGLDEEALDLFRQLYSEGMQ 209
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ + + AC A G+QVHA MI + T L+ MY + G L ++
Sbjct: 11 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ + VV+W ++S + + EA +F M R
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLR 104
>gi|125564403|gb|EAZ09783.1| hypothetical protein OsI_32071 [Oryza sativa Indica Group]
Length = 628
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 75/138 (54%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++FDE+ + N+ L ++RS N ALF M + L T ++ AC+ L
Sbjct: 160 HELFDEMPSKSNVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAEL 219
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
P P G +H ++++ G + P V +L+ Y+K+ LL +V+ F+ ++ + +WN+L+
Sbjct: 220 PDPSTGFAIHKVVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLI 279
Query: 150 SSFLRHGLAKEAFGVFQA 167
+ R G ++A +F++
Sbjct: 280 DAHARFGYIEQAALLFES 297
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF VL AC++ P G+ VH+ +GG S V L+DMY+K G + + F
Sbjct: 340 FTFGAVLHACASAPCLASGRMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDA 399
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I KD+V+WN +L F +GL KEA V++ MT V
Sbjct: 400 IHQKDLVSWNTMLFGFAINGLPKEALEVYEIMTYHNV 436
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FDEI D+ S N+ + Y + N+ LF M T + T V+ A +
Sbjct: 150 NMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSG 209
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G+QVH+ + G S + AL+D YSK G + + F + +KDV++WN L+
Sbjct: 210 SIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKDVISWNILIG 269
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 270 GYTHLNLYKEALLLFQEMLR 289
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +S+ D+ S N + YT + LF M + + T +L AC+ L A
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 92 PERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H + K G + ++T+L+DMYSK G + + + F + K + WNA++
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMI 371
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F HG A AF +F M + ++
Sbjct: 372 FGFAMHGRANAAFDIFSRMRKNEIK 396
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF+ I +L N+ + S + + L+ M S L +YTF +L +C+
Sbjct: 15 YAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKSCA 74
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY-------------------------- 121
L A + G Q+H ++K G + + V T+L+ MY
Sbjct: 75 KLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVSYTA 134
Query: 122 -----SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ G + + F EI KDVV+WNA++S ++ G KEA +F+ M + V
Sbjct: 135 LVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 2/129 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVF+ + H L + N+ +F + A + +F M + TF +L ACS
Sbjct: 353 HQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHA 412
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ + M + + M D+ GL E+ E + + D V W +
Sbjct: 413 GMLDLGRHIFRSMTHNYKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCS 472
Query: 148 LLSSFLRHG 156
LL + HG
Sbjct: 473 LLKACKMHG 481
>gi|125606358|gb|EAZ45394.1| hypothetical protein OsJ_30043 [Oryza sativa Japonica Group]
Length = 494
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 75/138 (54%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++FDE+ + N+ L ++RS N ALF M + L T ++ AC+ L
Sbjct: 26 HELFDEMPSKSNVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAEL 85
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
P P G +H ++++ G + P V +L+ Y+K+ LL +V+ F+ ++ + +WN+L+
Sbjct: 86 PDPSTGFAIHKVVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLI 145
Query: 150 SSFLRHGLAKEAFGVFQA 167
+ R G ++A +F++
Sbjct: 146 DAHARFGYIEQAALLFES 163
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF VL AC++ P G+ VH+ +GG S V L+DMY+K G + + F
Sbjct: 206 FTFGAVLHACASAPCLASGRMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDA 265
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I KD+V+WN +L F +GL KEA V++ MT V
Sbjct: 266 IHQKDLVSWNTMLFGFAINGLPKEALEVYEIMTYHNV 302
>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 793
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 7/158 (4%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+R + +F+ D S NS + Y R + L MH T L L A+T L
Sbjct: 159 ERIDHARLLFESSDELDNVSWNSLITGYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSAL 218
Query: 84 GAC--SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+C + GK +H +K G D + VV TAL+DMY+K G LG++++ F+ ++
Sbjct: 219 KSCYLNLNNMVSYGKTLHGYTVKQGLDLDIVVGTALLDMYAKTGYLGDAIQLFRTSPNQN 278
Query: 142 VVTWNALLSSFLR-----HGLAKEAFGVFQAMTRERVE 174
VV +NA+++ F++ A EA +F M R+ ++
Sbjct: 279 VVMYNAMIAGFIQTEDIDKECAYEALKLFSQMQRQGIK 316
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 71/129 (55%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S + + Y ++ F + ALF + ++ + T +L AC+ + A G+QVH
Sbjct: 384 DIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVH 443
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
+K G + +V+ + + MY+K G L + F+EI+ DVV+W+ ++ S +HG AK
Sbjct: 444 GYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEIKNPDVVSWSVMICSNAQHGHAK 503
Query: 160 EAFGVFQAM 168
+A +F+ M
Sbjct: 504 DAINLFELM 512
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD +S + S N + Y + LF CL L +++ VL AC +
Sbjct: 64 QKLFDRMSERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQI 123
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
GK +H L I G + + L+DMY K + + F+ + D V+WN+L+
Sbjct: 124 KDFALGKVIHGLAIVCGLGQQVFLTNLLIDMYCKCERIDHARLLFESSDELDNVSWNSLI 183
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + R G +E + M
Sbjct: 184 TGYARVGAYEEMLKLLVKM 202
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 55/103 (53%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + +TF+ ++ C+ + A E GKQ+HA + K S+ + + L+++YS
Sbjct: 306 LFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYS 365
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
G + ++ F D+V+W +++ + ++G + A +F
Sbjct: 366 LLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALF 408
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 47/92 (51%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L + +T ++ S + GK HA MIK + + +++YSK+G +G + +
Sbjct: 7 LDSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKL 66
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVF 165
F + + V+++N L+S + G +A G+F
Sbjct: 67 FDRMSERSVISYNILISGYGGMGFYHKAIGLF 98
>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 903
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S NS + Y LF M + +T+ VL C+ L + GKQ+HA +
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
IK S+ + + L+DMYSK G L +S F++ +D VTWNA++ + HG +EA
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 689
Query: 163 GVFQAMTRERVE 174
+F+ M E ++
Sbjct: 690 QLFERMILENIK 701
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + Y++ + LF + S+ L + + V AC+ +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 397
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q++ L IK + V A +DMY K L E+ F E+ +D V+WNA++++
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++G E +F +M R R+E
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIE 480
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S NS L Y ++ + +F M + TF +L CS L G Q+H
Sbjct: 144 DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH 203
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++++ G D++ V +AL+DMY+K ES+ F+ I K+ V+W+A+++ +++ L
Sbjct: 204 GIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 160 EAFGVFQAMTR 170
A F+ M +
Sbjct: 264 LALKFFKEMQK 274
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D S N+ + ++ ++ T LF M + + +TF +L AC+
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-G 496
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE----------------SVEAF 134
+ G ++H+ ++K G S V +L+DMYSK G++ E ++E
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 135 KEIEFKDV----VTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ K + V+WN+++S ++ +++A +F M
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 31/134 (23%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGG---------------TDSEPVVKTAL 117
+++ F+ V C+ A E GKQ HA MI G T+S V ++
Sbjct: 45 SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASM 104
Query: 118 ----------------MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
++ YSK + ++ F + +DVV+WN++LS +L++G + ++
Sbjct: 105 VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 162 FGVFQAMTRERVEF 175
VF M RE +EF
Sbjct: 165 IEVFVDMGREGIEF 178
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A KR+V + +VF I + S ++ + ++ F M ++ +
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL +C+AL G Q+HA +K ++ +V+TA +DMY+K + ++ F E
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 141 DVVTWNALLSSF 152
+ ++NA+++ +
Sbjct: 346 NRQSYNAMITGY 357
>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 722
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +RS AT + + L ++F P+L A S + A G ++H + K
Sbjct: 80 NPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFK 139
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
T +P V+T MDMY+ G + + F E+ +DVVTWN ++ + R GL EAF +
Sbjct: 140 IATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKL 199
Query: 165 FQAMTRERV 173
F+ M V
Sbjct: 200 FEEMKDSNV 208
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+ DL + + +Y S +F M + + + V+ AC+ L
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++ K VH+ + G +SE + AL++MY+K G L + + F+++ ++VV+W++++++
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG A +A +F M +E VE
Sbjct: 420 LSMHGEASDALSLFARMKQENVE 442
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 31/175 (17%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y VFDE+SH D+ + N+ + Y R + LF M + + ++
Sbjct: 161 RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTAL---------MDM--------------- 120
AC + ++ +I+ + + TAL MDM
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 121 -------YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
YSK G L ++ F + E KD+V W ++S+++ +EA VF+ M
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Score = 42.4 bits (98), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y T VF+++ ++ S +S + + + +LF M
Sbjct: 379 LSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ 438
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKT-----ALMDMYSKY 124
+ TF VL CS E GK++ A M TD + ++D++ +
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM----TDEYNITPKLEHYGCMVDLFGRA 494
Query: 125 GLLGESVEAFKEIEF-KDVVTWNALLSSFLRHG 156
LL E++E + + +VV W +L+S+ HG
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
mitochondrial-like [Vitis vinifera]
Length = 694
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F+E+ L S NS + + + LF M +N T +L AC+
Sbjct: 277 QLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTG 336
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + +HA + + G +++ ++ TAL+++Y+K G L S + F+EI+ +D + W A+L+
Sbjct: 337 LGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLA 396
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ H +EA +F M +E VE
Sbjct: 397 GYAVHACGREAIKLFDLMVKEGVE 420
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSA 88
++FDE+ + DL S NS + + A FC M + + T V+ AC+
Sbjct: 174 QRLFDEMPNKDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACAD 233
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ A + GK +H +++K G + V +L++MY K G L + + F+E+ + +V+WN++
Sbjct: 234 MGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSM 293
Query: 149 LSSFLRHGLAKEAFGVFQAMTR 170
+ +G A++ +F M R
Sbjct: 294 VVIHNHNGYAEKGMDLFNLMKR 315
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
+HA +IK S+ + L+ MY K G ++ F E+ KD+V+WN+L+S G
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNKDLVSWNSLMSGLSGRGY 200
Query: 158 AKEAFGVFQAMTRE 171
F M E
Sbjct: 201 LGACLNAFCRMRTE 214
>gi|413922815|gb|AFW62747.1| hypothetical protein ZEAMMB73_141955 [Zea mays]
Length = 301
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 7/171 (4%)
Query: 10 FPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWAL 63
P K +S + A+ RY +V FD + D+ S ++ + Y S +L
Sbjct: 71 MPRKDLVS-STAMVSRYARNRKVEIARSIFDGMPEKDVVSWSAMISGYVDSNQPNEALSL 129
Query: 64 FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK 123
F M + T V+ AC+ L + + K +HA + G + + AL+DM++K
Sbjct: 130 FNGMQECGIRSDEVTMLSVISACANLGSLNKAKWIHAFIKNNGLNKVLHICNALIDMFAK 189
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
G + ++ F E+ K+V+TW +++S+F HG K + +F+ M E E
Sbjct: 190 CGGINLALNVFNEMPLKNVITWTSMISAFAMHGDGKSSLRLFEQMKDEGAE 240
>gi|297846530|ref|XP_002891146.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336988|gb|EFH67405.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 554
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 67/124 (54%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
L S S++F ALF + L +T VL + L G++VH +K G
Sbjct: 2 LKSLAESKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKTGL 61
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+S+ V +LM MY+ G + + + F E+ +DVV+WN L+SS++ HG ++A VFQ
Sbjct: 62 ESDSYVCNSLMGMYAALGKMEITHKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQR 121
Query: 168 MTRE 171
M+RE
Sbjct: 122 MSRE 125
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 72/141 (51%), Gaps = 6/141 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACS 87
TH+VFDE+ D+ S N + SY F ++F M + L T L ACS
Sbjct: 84 THKVFDEMPERDVVSWNGLISSYVGHGRFEDAISVFQRMSRESNLKADEGTIVSTLSACS 143
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKT--ALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
L E G++++ ++ T+ E V+T AL+DM+ K G L ++ F + K+V W
Sbjct: 144 VLKNLEIGERIYRYVV---TEFEMSVRTGNALVDMFCKCGCLDKARAIFDSMRDKNVKCW 200
Query: 146 NALLSSFLRHGLAKEAFGVFQ 166
+++S ++ +G EA +F+
Sbjct: 201 TSMVSGYVSNGRTDEARELFE 221
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ D+ + + Y + F LF M + + + +L C+
Sbjct: 218 ELFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTARIRPDNFVLVSLLTGCAQTG 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E+GK +H + + + VV TAL+DMY+K G + ++ F E++ +D +W +L+
Sbjct: 278 ALEQGKWIHGYIRENRVTVDKVVGTALVDMYAKCGCIETALGVFYEMKERDTASWTSLIY 337
Query: 151 SFLRHGLAKEAFGVFQAM 168
+G++ A ++ M
Sbjct: 338 GLATNGMSGRALDLYYEM 355
>gi|242052493|ref|XP_002455392.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
gi|241927367|gb|EES00512.1| hypothetical protein SORBIDRAFT_03g010050 [Sorghum bicolor]
Length = 506
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD + ++ S + + Y + R +F M + VL AC
Sbjct: 163 HARELFDAMPERNVVSWTTVIGGYAQMRRPEEAVEVFRRMQVEGIEPDGVALLSVLSACG 222
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L A + G+ VH +++ G E + +++DMY K G + ++VE F+ +E K VVTW
Sbjct: 223 DLGAVDLGEWVHRFVVRRGLRQEIPLMNSIIDMYMKCGCIEKAVEVFEGMEEKSVVTWTT 282
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
L++ F HGL +A +F+ M RE
Sbjct: 283 LIAGFALHGLGLQAVEMFRRMERE 306
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 95 GKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL 153
G Q+H+L+++ G S+ V +L+ +Y + ++ F E+ +DVV WN +++ ++
Sbjct: 97 GPQLHSLLLRTGHVASDTHVSASLVQLYCTCRHVADARSVFHEMAVRDVVAWNVMIAGYV 156
Query: 154 RHGLAKEAFGVFQAMTRERV 173
+ G A +F AM V
Sbjct: 157 KAGDLAHARELFDAMPERNV 176
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 79/168 (47%), Gaps = 10/168 (5%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+T+ AK C S+ DA H VF + D+ S N+ + YT++ LF
Sbjct: 495 LTDMYAK-CGSMKDA--------HDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAE 545
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M T +L AC++L A ++G+++H ++ G + V A++DMY K GL
Sbjct: 546 MQRES-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGL 604
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L + F I KD+V+W +++ + HG EA F M +E
Sbjct: 605 LVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIE 652
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + + S S + Y R LF M S + Y T +L AC+
Sbjct: 409 RVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAING 468
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ GK VH + + ++ V AL DMY+K G + ++ + F ++ KDV++WN ++
Sbjct: 469 NLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIG 528
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ ++ L EA +F M RE
Sbjct: 529 GYTKNSLPNEALTLFAEMQRE 549
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDE++ D+ S NS + Y ++ +F M +++ T V AC+ +
Sbjct: 306 QKLFDELTDRDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANI 365
Query: 90 PAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
GK +H+ IK T D E L+DMYSK G L ++ F+ ++ K VV+W ++
Sbjct: 366 GTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSM 425
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
++ ++R GL+ A +F M V
Sbjct: 426 ITGYVREGLSDGAIKLFDEMKSRGV 450
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 8/141 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD++S + N + Y+ S N+ + LF M + +YTF+ +L +A+
Sbjct: 207 VFDKLSESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVAR 266
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA----FKEIEFKDVVTWNA 147
E G+QVH L+ K G +S V +L+ Y +G V F E+ +DV++WN+
Sbjct: 267 VEEGRQVHGLICKLGFNSYNTVVNSLISFY----FVGRKVRCAQKLFDELTDRDVISWNS 322
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++S ++++GL +F M
Sbjct: 323 MISGYVKNGLDDRGIEIFIKM 343
>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
Length = 948
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ + FD+IS +++ + + Y ++ A+F M + + AC
Sbjct: 424 ILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNLVLAVAISAC 483
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+++P E GK +H + G + VV+TAL+DMYS+ G + ++ F EIE D V W+
Sbjct: 484 ASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWS 543
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
A++++ RHG + A + M ++
Sbjct: 544 AMIAALGRHGDPRGAVAMAARMQQD 568
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS-ALP 90
VF EI D + ++ + + R + A+ M + T VL AC+ A
Sbjct: 530 VFGEIERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGM 589
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E ++VH+L++ GG DS+P VK A+M MY+K G + E+ AF +IE DV W +L
Sbjct: 590 IEEAARKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLE 649
Query: 151 SFLRHG 156
++ R G
Sbjct: 650 AYCRLG 655
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 4/146 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+ FD I +++ + +Y R +F + + M + + TF +L C L
Sbjct: 325 RAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFITILDTCKNL- 383
Query: 91 APERGKQVHAL---MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A E GK++ AL + D+ + TA++ M+S++ + + EAF +I K V + A
Sbjct: 384 ALEDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFSSMILAREAFDKISQKSVAAYTA 443
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
+++ + + +EA +FQ M R RV
Sbjct: 444 MIAGYANNKQPREALAIFQEMIRRRV 469
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 61/135 (45%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S L + R++ LF M + F VL + L +GK++H
Sbjct: 233 DVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIH 292
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++++ + + +V TA++ MY++ G + ++ AF I+ V W L+ ++ R G
Sbjct: 293 SMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFN 352
Query: 160 EAFGVFQAMTRERVE 174
+ + M E V+
Sbjct: 353 SVMQILERMEAEGVK 367
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
++ VL C+ L A G +VH + + ++E V L+ MY+ +G GE+ F +
Sbjct: 65 SYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIFDGL 124
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQ 166
+V+++ A++ +++ G EA +
Sbjct: 125 GSHNVLSFTAIMRAYVTAGDPDEALKILH 153
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 9/176 (5%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYV------YTHQVFDEISHGDLSSLNSQLFSYTRSRN 56
S++R F + + + +AL Y ++FD I D+ S N+ + Y+
Sbjct: 287 SWVRDNGFGSN--LQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSL 344
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKT 115
+ ALF M + + TF +L AC+ L A + GK VHA + K S + T
Sbjct: 345 YEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWT 404
Query: 116 ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+L+DMY+K G + + F+ + +++ +WNA+LS F HG A+ A +F M +
Sbjct: 405 SLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNK 460
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDEI D+ S N+ + Y +S F F M + T VL AC
Sbjct: 218 RLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTR 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E GK + + + G S + AL+DMY K G + E F IE KDV++WN ++
Sbjct: 278 SGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIG 337
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ L +EA +F+ M R V+
Sbjct: 338 GYSYLSLYEEALALFEVMLRSNVK 361
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 31/130 (23%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY---------- 124
++TF + +C+ A GKQ+HA +K P V T+++ MY+
Sbjct: 130 NSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVF 189
Query: 125 ---------------------GLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFG 163
G L ++ F EI KDVV+WNA++S +++ G +EA
Sbjct: 190 DKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIV 249
Query: 164 VFQAMTRERV 173
F M V
Sbjct: 250 CFYEMQEANV 259
>gi|52076160|dbj|BAD46673.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 678
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 76/144 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++FDE+ + N+ L ++RS N ALF M + L T ++ AC+ L
Sbjct: 210 HELFDEMPSKSNVAWNTLLMGHSRSGNAKQCLALFNQMWMSGLTCDDATLCILVDACAEL 269
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
P P G +H ++++ G + P V +L+ Y+K+ LL +V+ F+ ++ + +WN+L+
Sbjct: 270 PDPSTGFAIHKVVVQSGWNGIPEVNNSLISFYTKFSLLDCAVQIFESMKTRTTASWNSLI 329
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ R G ++A +F++ +
Sbjct: 330 DAHARFGYIEQAALLFESAPETNI 353
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+TF VL AC++ P G+ VH+ +GG S V L+DMY+K G + + F
Sbjct: 390 FTFGAVLHACASAPCLASGRMVHSCAFQGGFASYLYVANNLVDMYAKCGDVEGANNVFDA 449
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
I KD+V+WN +L F +GL KEA V++ MT V
Sbjct: 450 IHQKDLVSWNTMLFGFAINGLPKEALEVYEIMTYHNV 486
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K R + +VF + D S NS + Y ++ + LF M + +
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A F+ V+ AC+ L GKQ+H +++GG S + +AL+DMYSK G + + + F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ D V+W A++ HG EA +F+ M R+ V+
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 9 NFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
+ A+TCI +P +VF+ + D+ S N+ + Y +S + + M
Sbjct: 180 DVKAETCI-----MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+T L ++T + VL S +GK++H +I+ G DS+ + ++L+DMY+K +
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+S F + +D ++WN+L++ ++++G EA +F+ M +V+
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
>gi|356518834|ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08490-like [Glycine max]
Length = 875
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 77/143 (53%), Gaps = 3/143 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNL-TAYTFTPVLGACSA 88
++FD++SH D N L ++ S A +F MHS+ L + T VL C+
Sbjct: 99 KLFDQLSHCDPVVWNIVLSGFSGSNKCDADVMRVFRMMHSSREALPNSVTVATVLPVCAR 158
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA-FKEIEFKDVVTWNA 147
L + GK VH +IK G D + + AL+ MY+K GL+ A F I +KDVV+WNA
Sbjct: 159 LGDLDAGKCVHGYVIKSGFDQDTLGGNALVSMYAKCGLVSHDAYAVFDNIAYKDVVSWNA 218
Query: 148 LLSSFLRHGLAKEAFGVFQAMTR 170
+++ + L ++AF +F +M +
Sbjct: 219 MIAGLAENRLVEDAFLLFSSMVK 241
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+L +CSAL AP G+ +H ++K G S V L++MY+K G+L E ++ F ++
Sbjct: 45 VLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKGLLNMYAKCGMLVECLKLFDQL 104
Query: 138 EFKDVVTWNALLSSF 152
D V WN +LS F
Sbjct: 105 SHCDPVVWNIVLSGF 119
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ F IS DL S NS ++ R+ +L M + + T ++ C++L
Sbjct: 410 YHTFSMISMKDLISWNSIFDAFGEKRHHSRFLSLLHCMLKLRIRPDSVTILAIIRLCASL 469
Query: 90 PAPERGKQVHALMIKGG---TDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTW 145
E+ K++H+ I+ G +++ P V A++D YSK G + + + F+ + E +++VT
Sbjct: 470 LRVEKVKEIHSYSIRTGSLLSNTAPTVGNAILDAYSKCGNMEYANKMFQNLSEKRNLVTC 529
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
N+L+S ++ G +A +F M+
Sbjct: 530 NSLISGYVGLGSHHDANMIFSGMSE 554
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 4/140 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ VFD I++ D+ S N+ + +R + LF M T +L C++
Sbjct: 202 YAVFDNIAYKDVVSWNAMIAGLAENRLVEDAFLLFSSMVKGPTRPNYATVANILPVCASF 261
Query: 90 P---APERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
A G+Q+H+ +++ S V V AL+ +Y K G + E+ F ++ +D+VTW
Sbjct: 262 DKSVAYYCGRQIHSYVLQWPELSADVSVCNALISLYLKVGQMREAEALFWTMDARDLVTW 321
Query: 146 NALLSSFLRHGLAKEAFGVF 165
NA ++ + +G +A +F
Sbjct: 322 NAFIAGYTSNGEWLKALHLF 341
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+ +AL Y+ Q +F + DL + N+ + YT + + LF + S
Sbjct: 287 VSVCNALISLYLKVGQMREAEALFWTMDARDLVTWNAFIAGYTSNGEWLKALHLFGNLAS 346
Query: 70 -TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLL 127
L + T +L AC+ L + GKQ+HA + + + V AL+ Y+K G
Sbjct: 347 LETLLPDSVTMVSILPACAQLKNLKVGKQIHAYIFRHPFLFYDTAVGNALVSFYAKCGYT 406
Query: 128 GESVEAFKEIEFKDVVTWNALLSSF 152
E+ F I KD+++WN++ +F
Sbjct: 407 EEAYHTFSMISMKDLISWNSIFDAF 431
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 71/146 (48%), Gaps = 3/146 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-MHSTCLNLTAYTFTPVLGACSA 88
+ +F +S DL++ N + Y + + P C+ + + + T +L C+
Sbjct: 546 NMIFSGMSETDLTTWNLMVRVYAEN-DCPEQALGLCHELQARGMKPDTVTIMSLLPVCTQ 604
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + Q +I+ + ++ AL+D Y+K G++G + + F+ KD+V + A+
Sbjct: 605 MASVHLLSQCQGYIIRS-CFKDLHLEAALLDAYAKCGIIGRAYKIFQLSAEKDLVMFTAM 663
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + HG+++EA +F M + ++
Sbjct: 664 IGGYAMHGMSEEALWIFSHMLKLGIQ 689
>gi|224120036|ref|XP_002318226.1| predicted protein [Populus trichocarpa]
gi|222858899|gb|EEE96446.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + ++ S NS + SY + F + LF M S + YTF VL ACS L
Sbjct: 216 FETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGVTPDGYTFVSVLSACSNLGDL 275
Query: 93 ERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E GK +H L G + SE +V TAL +MY++ G + ++ F +I +DV WN ++ +
Sbjct: 276 EFGKYIHYL--SGDLSQSEVMVGTALTEMYAQCGDVDKAFAVFIKIGKRDVFCWNVIIKA 333
Query: 152 FLRHGLAKEAFGVFQAMTR 170
HG ++EA +F M +
Sbjct: 334 LALHGRSEEAIKIFLLMRK 352
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 14/160 (8%)
Query: 28 YTHQVFDEISHGDLSSL---NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
Y++ +F ++ H + + N+ + Y + F +F M L +T+ V+
Sbjct: 3 YSNLIFSQMGHDSSAEIVIWNAMIRGYAFNGPFQECIRMFDEMPQRGLKPHNFTYPYVIN 62
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSK------YGL-----LGESVEA 133
+C L RGK+VH ++K G +S V +L +MY K GL L + +
Sbjct: 63 SCCELEWYGRGKRVHCEIVKSGFESSYAVANSLFNMYLKMPASFDVGLASNCKLDYARKI 122
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F ++ + V WN ++ ++ G K A +F M +
Sbjct: 123 FDDMCVRPVELWNQMIGKYVNIGDVKSARELFDIMPERDI 162
Score = 36.6 bits (83), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKT----ALM 118
+F M T L +TFT L ACS E G + M K D + + K L+
Sbjct: 346 IFLLMRKTGLKPNDFTFTSALFACSHGGLVEEGHIIFNSMEK---DYKIIPKITHYGCLI 402
Query: 119 DMYSKYGLLGESVEAFKEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
DM + G L E++ +++ F+ DV W ALL G K A V + T
Sbjct: 403 DMLCRNGQLEEAMLLVEDMPFQPDVAIWGALLGGCRVTGDLKLAEKVVEKATE 455
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
T+++ Y+ L + F+ + ++VV+WN+++SS+ +HG E+ +F M E V
Sbjct: 197 TSMIGAYADTDDLETARSFFETMPQRNVVSWNSMISSYAKHGKFVESLNLFVQMQSEGV 255
>gi|357153150|ref|XP_003576355.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Brachypodium distachyon]
Length = 617
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 73/140 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ + D+ S + + S + + FC M ++TF V+ +C+ +
Sbjct: 286 KLFEAMPEKDVVSWTALISGLVASGHQADAFKTFCRMQGAATVPNSFTFGSVVSSCACVN 345
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q HAL+IK G +S P V ++L+DMYSK + ++ F + +D+V+WNA++
Sbjct: 346 DLGGGRQCHALVIKHGLESIPTVASSLLDMYSKCAEMDDATRMFDAMPRRDIVSWNAMIC 405
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
++G + A ++ M R
Sbjct: 406 GLAQNGRSARALELYDEMLR 425
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E QVHA +K G ++ V T + +YS GL+G++ + F+ + +D+V WN LL
Sbjct: 146 ESAWQVHARALKAGAFADACVGTGFVRLYSGLGLIGDARKVFEGMPERDLVAWNVLLDCG 205
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+R G A M RV+
Sbjct: 206 MRSGEAGSCLQDLVLMIGGRVQ 227
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 64/138 (46%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + DL + N L RS + M + +TF V+ +
Sbjct: 185 KVFEGMPERDLVAWNVLLDCGMRSGEAGSCLQDLVLMIGGRVQPDEFTFATVVNGLAERF 244
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A QVH++++K G + + +L+++Y + G + + + F+ + KDVV+W AL+S
Sbjct: 245 AGLEAMQVHSVILKSGHLKDLFLCNSLLNVYGRCGYVDLAKKLFEAMPEKDVVSWTALIS 304
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ G +AF F M
Sbjct: 305 GLVASGHQADAFKTFCRM 322
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 11/134 (8%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY-----MHSTCLNLTAYTFTPVLGA 85
++FD + D+ S N+ + ++N + AL Y +H + + T VL A
Sbjct: 387 RMFDAMPRRDIVSWNAMICGL--AQNGRSARALELYDEMLRLHQESITPNSVTCVGVLSA 444
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DV 142
CS + A E+G M+ EPV + + L+D++++ GLL E+ FK D
Sbjct: 445 CSHVGAVEKGCIYFTQMVN-DFHIEPVPEHYSCLVDLFARAGLLDEAEGIISNSPFKHDA 503
Query: 143 VTWNALLSSFLRHG 156
+ LL+ ++G
Sbjct: 504 IILGTLLNGCRKYG 517
>gi|356524477|ref|XP_003530855.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g06145-like [Glycine max]
Length = 529
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 77/142 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+++ D+ S + + Y+R++ + ALF + + T T V+ AC+ L A
Sbjct: 195 LFNQMPARDIISWTTMMNCYSRNKRYKEVIALFHDVIDKGMIPDEVTMTTVISACAHLGA 254
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK+VH ++ G D + + ++L+DMY+K G + ++ F +++ K++ WN ++
Sbjct: 255 LALGKEVHLYLVLQGFDLDVYIGSSLIDMYAKCGSIDMALLVFYKLQTKNLFCWNCIIDG 314
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
HG +EA +F M R+R+
Sbjct: 315 LATHGYVEEALRMFGEMERKRI 336
Score = 65.5 bits (158), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 2/114 (1%)
Query: 62 ALFCYMHSTCLNL--TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMD 119
AL YMH N+ T+Y+F+ ++ AC+ L G+ VH + K G DS V+T L++
Sbjct: 60 ALVHYMHMLRNNVMPTSYSFSSLIKACTLLVDSAFGEAVHGHVWKHGFDSHVFVQTTLIE 119
Query: 120 MYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
YS +G +G S F ++ +DV W ++S+ +R G A +F M + V
Sbjct: 120 FYSTFGDVGGSRRVFDDMPERDVFAWTTMISAHVRDGDMASAGRLFDEMPEKNV 173
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + + Y + LF ++S + TFT ++ A S L
Sbjct: 199 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 258
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GKQVHAL+++ ++ +L+DMYSK G L S F + + VV+WNA+L
Sbjct: 259 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 318
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ RHGL E +F+ + +E
Sbjct: 319 GYGRHGLGHEVISLFKDLHKE 339
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
V D + + S + + Y+++ LF M YT VL +CS
Sbjct: 98 NVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQ 157
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +GKQVH+L++K +S V ++L+DMY+K + E+ F + +DVV+ A++S
Sbjct: 158 SIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIIS 217
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + GL +EA +F+ + E ++
Sbjct: 218 GYAQKGLDEEALDLFRQLYSEGMQ 241
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ + + AC A G+QVHA MI + T L+ MY + G L ++
Sbjct: 43 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 102
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ + VV+W ++S + + EA +F M R
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLR 136
>gi|15128398|dbj|BAB62584.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 612
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 12/166 (7%)
Query: 16 ISIADALPKRYVYTHQVFDE--ISHG------DLSSLNSQLFSYTRSRNFPATWALFCYM 67
+S+ +AL Y H+V D + G DL S NS L + S + T LF M
Sbjct: 238 VSVCNALVDLYGKCHKVDDAAMVFEGMADIVKDLFSWNSMLSALHYSADHAGTMKLFSRM 297
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKT----ALMDMYSK 123
+ A T VL AC+ A + G++VH ++ G + + AL+DMY+K
Sbjct: 298 RRVAVWPDAVTVAAVLPACAQTAALQVGREVHGYIVTSGLACHGALDSFACNALVDMYAK 357
Query: 124 YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
G L E+ F ++ +DV +WN ++ + HG KEA +F MT
Sbjct: 358 SGALDEARRIFDRMQQRDVASWNIMIDGYASHGHGKEALELFCQMT 403
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC-LNLTAYTFTPVLGAC 86
+ ++F E+ D+ N+ + + R F F M + ++++T T +L C
Sbjct: 154 HARRLFGELPRRDVVVWNAMVNGFARLGCFGHAVECFRMMREDGEVEISSFTVTGILSVC 213
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE--FKDVVT 144
+A G VH L++K + E V AL+D+Y K + ++ F+ + KD+ +
Sbjct: 214 TATADLGHGAAVHGLVVKSAFEQEVSVCNALVDLYGKCHKVDDAAMVFEGMADIVKDLFS 273
Query: 145 WNALLSSF 152
WN++LS+
Sbjct: 274 WNSMLSAL 281
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A++F P++ S+ P+P +HAL ++ G + +A++ ++GL + F
Sbjct: 104 AFSFPPLV---SSAPSPPHLLALHALALRCGLAHDLFCASAMLRSCLRFGLADHARRLFG 160
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
E+ +DVV WNA+++ F R G A F+ M RE E
Sbjct: 161 ELPRRDVVVWNAMVNGFARLGCFGHAVECFR-MMREDGE 198
>gi|242047556|ref|XP_002461524.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
gi|241924901|gb|EER98045.1| hypothetical protein SORBIDRAFT_02g004050 [Sorghum bicolor]
Length = 867
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
T YTF +L AC+ P G QVHAL+ K G S +V AL+ MY K G G+++ AF
Sbjct: 144 TEYTFVGLLTACARRGNPRLGTQVHALVAKSGHASSLLVANALLGMYVKCGRFGDALRAF 203
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ +DV +WNA+L+ + G +EAF +F M
Sbjct: 204 DGMDRRDVSSWNAVLAGLVELGRHEEAFELFGEM 237
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 10/160 (6%)
Query: 18 IADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
+A+AL YV + FD + D+SS N+ L + LF M ++
Sbjct: 182 VANALLGMYVKCGRFGDALRAFDGMDRRDVSSWNAVLAGLVELGRHEEAFELFGEMRASG 241
Query: 72 LNLTA--YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL-LG 128
N+ A +T + +L A +G+ VHAL +K G +++ V AL+ Y+++G +
Sbjct: 242 -NVRADRFTLSALLAAAGEGFGQPQGEAVHALSLKSGLETDLSVGNALIGFYAEHGASVD 300
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V F+ + KDV++W LL+ ++ GL A VF+ M
Sbjct: 301 DVVSVFQRMPVKDVISWTGLLNGYMEFGLVDMALDVFERM 340
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 4/145 (2%)
Query: 30 HQVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYM--HSTCLNLTAYTFTPVLGA 85
H +F++ H + + NS L + R + + F M S + + T VLG
Sbjct: 445 HLLFEQWQHDESFHIAWNSLLLASVRDGEYEKALSTFLQMFRSSGVEFIDEFMLTAVLGV 504
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C +L E GKQ+H+ K G V A++ MY K G L ++ F+ + +D+V+W
Sbjct: 505 CGSLGFAELGKQMHSFTAKSGLLCARGVGNAIISMYGKCGELKDAGSFFEGMTCRDLVSW 564
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTR 170
NA++++ L H E ++ M R
Sbjct: 565 NAMITAHLLHHQGDEILKIWSEMER 589
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 60/117 (51%), Gaps = 3/117 (2%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
LF M L ++ T T VL AC+ + +QVHA +IK G S P + AL+DM
Sbjct: 376 GLFRQMVEAGLEISDVTVTGVLNACAIAADRKASEQVHAFVIKCGCVSSPWIDAALIDMC 435
Query: 122 SKYGLLGESVEAFKEIEFKDV--VTWNALLSSFLRHGLAKEAFGVFQAMTRER-VEF 175
K G G++ F++ + + + WN+LL + +R G ++A F M R VEF
Sbjct: 436 IKCGRSGDAHLLFEQWQHDESFHIAWNSLLLASVRDGEYEKALSTFLQMFRSSGVEF 492
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 78/147 (53%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +++F+ I H L N + ++ + + + +LF + + YT+ VL
Sbjct: 60 YANRIFNHIHHPSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIG 119
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G+++HA ++K G + +P V +LMDMY++ GL+ + F+E+ +D V+WN
Sbjct: 120 CIGEVREGEKIHAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNI 179
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S ++R +EA V++ M E E
Sbjct: 180 MISGYVRCKRFEEAVDVYRRMQMESNE 206
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 67/137 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ D+ + + Y + +F ALF M + + +L C+ L A
Sbjct: 297 LFERSPSRDVVLWTAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGA 356
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK +H + + + VV TAL++MY+K G + +S+E F ++ D +W +++
Sbjct: 357 LEQGKWIHNYIDENRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICG 416
Query: 152 FLRHGLAKEAFGVFQAM 168
+G EA +F+AM
Sbjct: 417 LAMNGKTSEALELFEAM 433
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 2/137 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGACSAL 89
QVF+E+ D S N + Y R + F ++ M + T L AC+ L
Sbjct: 164 QVFEEMPERDAVSWNIMISGYVRCKRFEEAVDVYRRMQMESNEKPNEATVVSTLSACAVL 223
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E GK++H I D P++ AL+DMY K G + + E F + K+V W +++
Sbjct: 224 RNLELGKEIHDY-IANELDLTPIMGNALLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMV 282
Query: 150 SSFLRHGLAKEAFGVFQ 166
+ ++ G +A +F+
Sbjct: 283 TGYVICGQLDQARYLFE 299
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y H +F+ + + N+ + Y +R ++ F YM + + + +F L AC
Sbjct: 209 YAHTIFNRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQ 268
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
G+ V+ ++ K G D E +V+ L+ Y++ GLL + + F E KDVVTW
Sbjct: 269 QFETVFEGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTT 328
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ + H ++EA VF+ M VE
Sbjct: 329 MIDGYAAHDCSEEAMEVFELMLLSHVE 355
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD+ + ++ + Y+++ + LF M + +T VL AC L
Sbjct: 447 FDQTPRKNAVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCL 506
Query: 93 ERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G +H + G V ++ A++DMY+K G + + E F + +++++WN +++
Sbjct: 507 NLGDWIHQYFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAG 566
Query: 152 FLRHGLAKEAFGVFQAM 168
+ +G AK+A VF M
Sbjct: 567 YAANGRAKQAINVFDQM 583
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFDE S D+ + + + Y +F M + + T V+ ACS +
Sbjct: 313 QVFDESSDKDVVTWTTMIDGYAAHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMG 372
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK+VH + + + AL+DMY K L ++ E F + KDV +W ++++
Sbjct: 373 NLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVN 432
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ + G + A F R+
Sbjct: 433 GYAKCGDLESARRFFDQTPRK 453
>gi|15229605|ref|NP_190543.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183390|sp|Q9M2Y4.1|PP276_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49740
gi|6723419|emb|CAB66912.1| putative protein [Arabidopsis thaliana]
gi|332645063|gb|AEE78584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 737
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFS-YTRSRNFPA 59
+ F + I I++AL Y Q+ F+ +L S N+ + Y F
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 60 TWALFCYMHSTCLNL-TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
C + S L AYT + +L C + + G Q HA +++ G E ++ AL+
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+MYS+ G + S+E F ++ KDVV+WN+L+S++ RHG + A ++ M E
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE 584
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F M L T TF V+G+CS G QVH L IK G + +V A M MYS
Sbjct: 278 VFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ G + + F+ +E KD+VTWN ++SS+ + L K A V++ M
Sbjct: 335 SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF+ + DL + N+ + SY +++ + +++ MH + +TF +L L
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E V A +IK G S+ + AL+ YSK G + ++ F+ K++++WNA++
Sbjct: 403 DVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S F +G E F + V
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRI 485
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSALPAPERGKQVH 99
L +LN +L TRS LF +H T L Y+ + + L G QVH
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
I+ G V L+ +Y + G L + F EI+ DV +W LLS+ + G +
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 160 EAFGVFQAM 168
AF VF M
Sbjct: 141 YAFEVFDKM 149
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 28 YTHQVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
Y +VFD++ D++ N+ + S + LF MH + + F +L C
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC 200
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE--IEFKDVVT 144
+ + GKQVH+L+IK G V AL+ MY ++ ++ F+E + +D VT
Sbjct: 201 D-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVT 259
Query: 145 WNALLSSFLRHGLA----KEAFGVFQAM 168
+N ++ GLA E+ VF+ M
Sbjct: 260 FNVVID-----GLAGFKRDESLLVFRKM 282
>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Glycine max]
Length = 785
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Query: 18 IADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY 77
I D P R +FD + H D+ + + + Y ++ LF M Y
Sbjct: 359 IGDIDPAR-----AIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNY 413
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL S+L + + GKQ+HA+ I+ S V AL+ MYS+ G + ++ + F I
Sbjct: 414 TLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHI 473
Query: 138 -EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++D +TW +++ S +HGL EA +F+ M R
Sbjct: 474 CSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLR 507
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 6/142 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDEI D S + + Y F + F M S+ ++ T +TFT VL +C+A
Sbjct: 100 RVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQ 159
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA---FKEIEFKDVVTWNA 147
A + GK+VH+ ++K G V +L++MY+K G+SV A F + KD TWN
Sbjct: 160 ALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAK---CGDSVMAKVVFDRMRLKDTSTWNT 216
Query: 148 LLSSFLRHGLAKEAFGVFQAMT 169
++S ++ A +F MT
Sbjct: 217 MISMHMQFCQFDLALALFDQMT 238
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 75/174 (43%), Gaps = 34/174 (19%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSALP 90
+FD+++ D+ S NS + Y F +M S+ L +T VL AC+
Sbjct: 233 LFDQMTDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRE 292
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL------------------------ 126
+ + GKQ+HA +++ D V AL+ MY+K G
Sbjct: 293 SLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSL 352
Query: 127 ------LGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+G+ A F ++ +DVV W A++ + ++GL +A +F+ M RE
Sbjct: 353 LDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIRE 406
Score = 40.4 bits (93), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 14 TCISIADALPKRYVYT------HQVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ +S+ +AL Y + ++F+ I S+ D + S + S + LF
Sbjct: 445 SSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEK 504
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKY 124
M L T+ VL AC+ + E+GK LM K + EP ++D+ +
Sbjct: 505 MLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLM-KNVHNIEPTSSHYACMIDLLGRA 563
Query: 125 GLLGESVEAFKEIEFK-DVVTWNALLSSFLRH 155
GLL E+ + + + DVV W +LLSS H
Sbjct: 564 GLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVH 595
>gi|359491319|ref|XP_002281821.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74400-like [Vitis vinifera]
Length = 482
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H +FDEI +L S S + +Y ++ LF M + T T L AC+ L
Sbjct: 125 HNMFDEIPSKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADL 184
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + G+ +HA + G D++ + +L++MYSK G +G + F + KDV TW +++
Sbjct: 185 GALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMI 244
Query: 150 SSFLRHGLAKEAFGVFQAM 168
HG A+EA +F M
Sbjct: 245 VGHALHGQAEEALQLFTEM 263
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 70/133 (52%), Gaps = 5/133 (3%)
Query: 45 NSQLFSYTRSRNFPATWALF-CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMI 103
N L Y +S N F + ++ +++ L AC+ + GKQ+HAL+I
Sbjct: 38 NQTLKRYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALVI 97
Query: 104 KGGTDSEPVV--KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
G EP++ +T+L+ MYS G + ++ F EI K++++W +++S+++ + +A
Sbjct: 98 NFGF--EPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLISWTSVISAYVDNQRPNKA 155
Query: 162 FGVFQAMTRERVE 174
+F+ M + V+
Sbjct: 156 LQLFRQMQMDDVQ 168
>gi|347954474|gb|AEP33737.1| chlororespiratory reduction 21 [Nasturtium officinale]
Length = 826
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 15 CISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
C+ +A +L Y +VFDEI ++ + N+ + Y ++ L M
Sbjct: 205 CVFVASSLADMYGKCGVLDDARKVFDEIPERNVVAWNALMVGYVQNGMNEEAIRLLSDMR 264
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+ T T + L A + + E GKQ HA+ I G + + ++ T+ ++ Y K GL+
Sbjct: 265 KEGIEPTRVTVSTCLSASANMDGIEEGKQSHAIAIVNGLELDNILGTSNLNFYCKVGLIE 324
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ F + KDVVTWN L+S +++ GL ++A + Q M E +++
Sbjct: 325 YAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKY 371
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH ++K G V ++L DMY K G+L ++ + F EI ++
Sbjct: 177 VCKACGALQWSRFGRGVHGYVVKSGLHDCVFVASSLADMYGKCGVLDDARKVFDEIPERN 236
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
VV WNAL+ ++++G+ +EA + M +E +E
Sbjct: 237 VVAWNALMVGYVQNGMNEEAIRLLSDMRKEGIE 269
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 66/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +FD + D+ + N + Y + + M L T + ++ A +
Sbjct: 325 YAEMIFDRMIEKDVVTWNLLISGYVQQGLVEDAIHMCQLMRLENLKYDCVTLSTLMSAAA 384
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ S+ V+ + +DMY+ G + ++ + F + KD++ WN
Sbjct: 385 RTQNLKLGKEVQCYCIRHSFASDIVLASTAVDMYANCGSIIDAKKVFDSVLAKDLILWNT 444
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LLS + GL+ EAF +F M E V
Sbjct: 445 LLSVYAESGLSGEAFRLFYEMQLESV 470
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L A++ T L ACS L + G+ VH +I+ S V ++T+L+DMY+K G
Sbjct: 535 MQESGLRPNAFSITVALSACSNLASLHFGRSVHGYIIRNQQHSSSVLIETSLVDMYAKCG 594
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
+ ++ F+ D+ +NA++S++ +G KEA +
Sbjct: 595 DINKAEMVFRSKLCSDLPLYNAMISAYALNGNVKEAIAL 633
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 2/126 (1%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT-- 107
S ++S +L M L + + +L C GKQ+HA ++K G
Sbjct: 42 SLSKSGEIREALSLLTEMDFRKLRIGPEIYGEILQGCVYERDLCTGKQIHARILKNGDFY 101
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
++T L+ Y+K S F ++ ++V +W A++ R GL +EA F
Sbjct: 102 AKNEYIETKLVIFYAKCDAFEASEVLFSKLRVRNVYSWAAIIGVKCRIGLCEEALMGFVE 161
Query: 168 MTRERV 173
M + +
Sbjct: 162 MLQNEI 167
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D+ S + + Y + LF ++S + TFT ++ A S L
Sbjct: 167 RVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLA 226
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GKQVHAL+++ ++ +L+DMYSK G L S F + + VV+WNA+L
Sbjct: 227 SLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLM 286
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ RHGL E +F+ + +E
Sbjct: 287 GYGRHGLGHEVISLFKDLHKE 307
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
V D + + S + + Y+++ LF M YT VL +CS
Sbjct: 66 NVLDRMPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQ 125
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ +GKQVH+L++K +S V ++L+DMY+K + E+ F + +DVV+ A++S
Sbjct: 126 SIYQGKQVHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIIS 185
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ + GL +EA +F+ + E ++
Sbjct: 186 GYAQKGLDEEALDLFRQLYSEGMQ 209
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ + + AC A G+QVHA MI + T L+ MY + G L ++
Sbjct: 11 HEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDR 70
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ + VV+W ++S + + EA +F M R
Sbjct: 71 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLR 104
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FDE+S DL N + Y + + +F M + +TFT ++ +C L +
Sbjct: 236 FDEVSSRDLVLWNVMVSCYALNGVQGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSC 295
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
GKQVH L+I+ D + +V +AL+DMYSK + ++ +AF + K++V+W + +
Sbjct: 296 GLGKQVHGLIIRLSFDLDVLVASALVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGY 355
Query: 153 LRHGLAKEAFGVFQAMTR 170
+HG KE + Q M R
Sbjct: 356 GQHGDGKEXMRLLQEMIR 373
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 53/79 (67%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+H ++K G DS V +AL+D Y+K+GL+ E+ AF E+ +D+V WN ++S + +
Sbjct: 198 RQLHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALN 257
Query: 156 GLAKEAFGVFQAMTRERVE 174
G+ +AFGVF+ M E V+
Sbjct: 258 GVQGKAFGVFKLMRLEGVK 276
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L +C L A QVHA +++ G ++ + AL+ YSK G +G + ++F + D
Sbjct: 386 ILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFSSVAEPD 445
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++W +L+ ++ HGL+K+ VF+ + V
Sbjct: 446 IISWTSLMGAYAFHGLSKQGVDVFEKILSSNVR 478
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL- 153
GKQ+HA +IK G + ++ ++ +Y K + + F E+ K+VV+WN L+ +
Sbjct: 92 GKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNVVSWNTLICGVVE 151
Query: 154 ---RHGLAKEAFGVFQAMTRE 171
+ L + F F+ M E
Sbjct: 152 GNCKFALVRLGFHCFRQMVLE 172
>gi|224074129|ref|XP_002304264.1| predicted protein [Populus trichocarpa]
gi|222841696|gb|EEE79243.1| predicted protein [Populus trichocarpa]
Length = 499
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL--GACSA 88
+VFDE+ D + N + Y R+R +F M S L T +L AC+
Sbjct: 80 KVFDEMRQRDTIAWNVLISCYMRNRRTRDVLVIFDGMLSGELGCEPDDVTCLLLLQACAN 139
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L A E G++VH +++ G D+ + +L+ MYS++G L ++ FK + K+VVTW+A+
Sbjct: 140 LGALEFGEKVHGHIVERGYDNATNLCNSLIAMYSQFGNLDKAFGVFKGMHNKNVVTWSAI 199
Query: 149 LSSFLRHGLAKEAFGVFQAMTR 170
+S +G +EA G F+ M +
Sbjct: 200 ISGLAMNGYGREAIGAFEEMLK 221
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+QVHA ++ G S+ ++ T LMD+YS E+ + F E+ +D + WN L+S ++R
Sbjct: 43 GEQVHARILSDGHQSDSLLLTNLMDLYSLCDKGSEACKVFDEMRQRDTIAWNVLISCYMR 102
Query: 155 HGLAKEAFGVFQAM 168
+ ++ +F M
Sbjct: 103 NRRTRDVLVIFDGM 116
>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 707
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 71/143 (49%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + D + N+ + + R LF M + L + VL C++L +
Sbjct: 291 MFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLAS 350
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+QVHA +++ D + V + L+ MY K G L + F FKDVV WN++++
Sbjct: 351 LDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFKDVVMWNSMITG 410
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ +HGL +EA VF M V+
Sbjct: 411 YSQHGLGEEALNVFHDMCSSGVQ 433
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 115 TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
T ++ Y+K G + + + F+ + ++ V+W A+L + + G KEAF +F+AM
Sbjct: 211 TTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLMGYTQSGRMKEAFELFEAM 264
>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Glycine max]
Length = 815
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 82/154 (53%), Gaps = 2/154 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K ++ +++F +++H + + Y + LF MH +
Sbjct: 381 SLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGA 440
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ T+ +L AC+ L + GKQ+H+ +I+ G S +AL+DMY+K G + E+++ F
Sbjct: 441 DSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMF 500
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+E+ ++ V+WNAL+S++ ++G A F+ M
Sbjct: 501 QEMPVRNSVSWNALISAYAQNGDGGHALRSFEQM 534
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 80/191 (41%), Gaps = 36/191 (18%)
Query: 9 NFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM- 67
NF +T + D R ++FDE+ H ++ S N+ + Y +S N +LF M
Sbjct: 46 NFQVQTHLQRGDLGAAR-----KLFDEMPHKNVISTNTMIMGYLKSGNLSTARSLFDSMV 100
Query: 68 ----------------HSTCL---NLTA-----------YTFTPVLGACSALPAPERGKQ 97
H+ L NL A T +L + + Q
Sbjct: 101 QRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFTEFESVNEVAQ 160
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VH ++K G DS +V +L+D Y K LG + FK + KD VT+NALL+ + + G
Sbjct: 161 VHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNVTFNALLTGYSKEGF 220
Query: 158 AKEAFGVFQAM 168
+A +F M
Sbjct: 221 NHDAINLFFKM 231
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 8/177 (4%)
Query: 3 SFIRMTNFPAKTCISIADAL------PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRN 56
SF+ NF + +A+AL R V ++F E+ D S N + +
Sbjct: 264 SFVVKCNFVWN--VFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGR 321
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
+ LF + T + + F +L + E G+Q+H+ I SE +V +
Sbjct: 322 VEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNS 381
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
L+DMY+K GE+ F ++ + V W AL+S +++ GL ++ +F M R ++
Sbjct: 382 LVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKI 438
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+F ++ D + N+ L Y++ LF M + +TF VL A +
Sbjct: 195 HLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMD 254
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+QVH+ ++K V AL+D YSK+ + E+ + F E+ D +++N L++
Sbjct: 255 DIEFGQQVHSFVVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLIT 314
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+G +E+ +F+ + R +
Sbjct: 315 CCAWNGRVEESLELFRELQFTRFD 338
>gi|413944243|gb|AFW76892.1| hypothetical protein ZEAMMB73_583413 [Zea mays]
Length = 639
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+TNF + I + R Q+F E+ N+ + Y RS +LF
Sbjct: 278 LTNFMVSSAIIDFLCMSDRLSDALQLFREMPTWGSEPCNALISGYARSGLMEEALSLFAV 337
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
+ ++F VL S E+G Q+H L+ K G ++ +V TAL DMY K GL
Sbjct: 338 SMRNGIVPNEFSFASVLKWSSCFGLMEQGTQIHCLVCKLGFQNDVIVSTALTDMYCKLGL 397
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ + F + KD+V WN +L L++G +KEA +F+ + + ++
Sbjct: 398 TKHARKIFDTVGAKDLVLWNTMLLGLLQNGRSKEALVIFKRILKCGIQ 445
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 4/138 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + D + N+ L Y + LFC M+ + T +TF+ V SA+ +
Sbjct: 103 LFDGMPQRDAVTYNAMLSGYVAGALLDEAFHLFCSMNERDVRPTPFTFSIV---SSAVGS 159
Query: 92 PERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
RG+Q+HA ++ G S+ VV AL+DMY + GLL + F +E DV +WN+++S
Sbjct: 160 VRRGQQLHAAAVRHGLAHSDVVVGNALIDMYGRVGLLEYAARVFSCMEQVDVTSWNSVMS 219
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ L F F M
Sbjct: 220 VYKDQALTSTVFKCFGTM 237
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF + D++S NS + Y + F M S ++ +T + VL ACS
Sbjct: 198 YAARVFSCMEQVDVTSWNSVMSVYKDQALTSTVFKCFGTMRSKGFSVDGFTVSIVLSACS 257
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ +G Q+ AL IK G + +V +A++D L ++++ F+E+ NA
Sbjct: 258 DVKDLVKGDQMLALCIKMGFLTNFMVSSAIIDFLCMSDRLSDALQLFREMPTWGSEPCNA 317
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
L+S + R GL +EA +F R +
Sbjct: 318 LISGYARSGLMEEALSLFAVSMRNGI 343
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHAL-MIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A+ +P L C G +A+ +++ L+ GLL ++ F
Sbjct: 45 AFFRSPYLSNCLGAAYSRLGAAPYAVALLRAAAKPNIFSHNILLSALVSSGLLEDARGLF 104
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ +D VT+NA+LS ++ L EAF +F +M V
Sbjct: 105 DGMPQRDAVTYNAMLSGYVAGALLDEAFHLFCSMNERDVR 144
>gi|356540844|ref|XP_003538894.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 748
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + ++ S NS + + ++ + M TF L AC+ L
Sbjct: 411 EIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKEGKKPDQSTFACTLSACANLA 470
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A + G Q+H ++K G ++ V AL+ MY+K G + + + F++IE D+++WN+L+S
Sbjct: 471 ALQVGNQLHEYILKSGYMNDLFVGNALIAMYAKCGRVQSAEQVFRDIECVDLISWNSLIS 530
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ +G A +AF F+ M+ ERV
Sbjct: 531 GYALNGYANKAFKAFEQMSSERV 553
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 18/176 (10%)
Query: 4 FIRMTNFPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNF 57
F RM P+K +S +A+ YV QV F ++ H D S + + Y R
Sbjct: 258 FDRM---PSKNVVSW-NAMIATYVQDLQVDEAVKLFKKMPHKDSVSWTTIINGYIRVGKL 313
Query: 58 PATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL 117
A Y C ++TA T S L R + + + G + V ++
Sbjct: 314 DE--ARQVYNQMPCKDITAQT-----ALMSGLIQNGRIDEADQMFSRIGA-HDVVCWNSM 365
Query: 118 MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ YS+ G + E++ F+++ K+ V+WN ++S + + G A +FQAM + +
Sbjct: 366 IAGYSRSGRMDEALNLFRQMPIKNSVSWNTMISGYAQAGQMDRATEIFQAMREKNI 421
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 19/177 (10%)
Query: 4 FIRMTNFPAKTCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
F MT+ T S+ L K R Q+FD++S +L S N+ + Y +
Sbjct: 40 FFNMTHKNLVTYNSMISVLAKNARIRDARQLFDQMSLRNLVSWNTMIAGYLHNNMVEEAS 99
Query: 62 ALFCYM-----HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
LF M S L +T YT L E+ +++ L+ + A
Sbjct: 100 ELFDVMPERDNFSWALMITCYTRKGKL---------EKARELLELV---PDKLDTACWNA 147
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++ Y+K G ++ + F+++ KD+V++N++L+ + ++G A F++MT V
Sbjct: 148 MIAGYAKKGQFNDAKKVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNV 204
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM---HSTCLNLTAYTFTPVLGACS 87
+VF+++ DL S NS L YT++ F M + NL + S
Sbjct: 163 KVFEQMPAKDLVSYNSMLAGYTQNGKMHLALQFFESMTERNVVSWNLMVAGYVKSGDLSS 222
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
A E+ +A V ++ +KYG + E+ E F + K+VV+WNA
Sbjct: 223 AWQLFEKIPNPNA-----------VSWVTMLCGLAKYGKMAEARELFDRMPSKNVVSWNA 271
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
+++++++ EA +F+ M
Sbjct: 272 MIATYVQDLQVDEAVKLFKKM 292
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
Y++ G + + E F+ + K++V+WN+L++ FL++ L +A M +E
Sbjct: 400 YAQAGQMDRATEIFQAMREKNIVSWNSLIAGFLQNNLYLDALKSLVMMGKE 450
>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
mitochondrial-like [Glycine max]
Length = 854
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD++ ++ S + + +Y+ ++ L +M + +TF+ VL AC L
Sbjct: 342 LFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYD 401
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
KQ+H+ ++K G +S+ V++AL+D+YSK G L E+++ F+E+ D V WN+++++
Sbjct: 402 L---KQLHSWIMKVGLESDVFVRSALIDVYSKMGELLEALKVFREMMTGDSVVWNSIIAA 458
Query: 152 FLRHGLAKEAFGVFQAMTR 170
F +H EA ++++M R
Sbjct: 459 FAQHSDGDEALHLYKSMRR 477
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ GD NS + ++ + + L+ M T T VL AC++L
Sbjct: 439 KVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLTSVLRACTSLS 498
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+Q H ++K D + ++ AL+DMY K G L ++ F + KDV++W+ +++
Sbjct: 499 LLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIA 556
Query: 151 SFLRHGLAKEAFGVFQAM 168
++G + EA +F++M
Sbjct: 557 GLAQNGFSMEALNLFESM 574
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
L ++ R+ P+ + M + + T++ ++ C A A GK+VH + G
Sbjct: 257 LLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGY 316
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQA 167
+ + L++MY K+ LL E+ F ++ ++VV+W ++S++ L A +
Sbjct: 317 HPKTFLTNILINMYVKFNLLEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAF 376
Query: 168 MTRERV 173
M R+ V
Sbjct: 377 MFRDGV 382
>gi|449527015|ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Cucumis sativus]
Length = 710
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 76/144 (52%), Gaps = 1/144 (0%)
Query: 31 QVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++F+ + S GD + NS + Y ++ L+ M T + + TF+ + AC+ L
Sbjct: 386 KLFESVKSEGDPVTWNSMISGYIQNHQHEGALKLYITMCRTSVERSRSTFSALFQACTCL 445
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H I+ DS V T+L+DMY+K G + ++ +F + +V + AL+
Sbjct: 446 EYIQLGQALHVHAIREAFDSNVYVGTSLIDMYAKCGSIYDAQTSFASVCLPNVAAFTALI 505
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ ++ HGL EAF VF M + +V
Sbjct: 506 NGYVHHGLGIEAFSVFDEMLKHKV 529
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+E+ + S N + Y++ + L MH + L TF+ +L C+
Sbjct: 59 LFNEMPVRSVVSWNIMISGYSKFGKYSEALNLASEMHCNNVKLNETTFSSLLSICAHSGC 118
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GKQ H L++K G V +AL+ Y+ + + + F E+ K+ + W+ LL
Sbjct: 119 SSEGKQFHCLVLKSGLQIFERVGSALVYFYANINDISGAKQVFDELHDKNDLLWDLLLVG 178
Query: 152 FLRHGLAKEAFGVFQAM-TRERVEF 175
+++ L +A +F + TR+ V +
Sbjct: 179 YVKCNLMDDALDLFMKIPTRDVVAW 203
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 3/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSR-NFPATWALFCYMHSTC-LNLTAYTFTPVLGACSA 88
+F +I D+ + + + +Y RS N LFC M + +TF V+ AC
Sbjct: 190 DLFMKIPTRDVVAWTTMISAYARSEHNCKRGLELFCSMRMNGEVEPNEFTFDSVVRACGR 249
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ GK VH ++ K G + V +AL+ Y + + + + +E + N+L
Sbjct: 250 MRYLSWGKVVHGILTKYGFHFDHSVCSALILFYCQCEAIDSAKAVYDSMERPCLKASNSL 309
Query: 149 LSSFLRHGLAKEAFGVFQAMTRER 172
L + G +A +F + RE+
Sbjct: 310 LEGLIFAGRINDAEEIFCKL-REK 332
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R H +F IS D NS + S+++ LF M + T + L
Sbjct: 363 RLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALS 422
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ +PA GK++H MIKG +S+ +AL++MY+K G L + F ++ K+ V
Sbjct: 423 ACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQEKNEVA 482
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
WN++++++ HG ++ +F M E ++
Sbjct: 483 WNSIIAAYGYHGYLADSLALFHNMLEEGIQ 512
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 61/101 (60%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A TF+ +L AC+ L A + G+++H +IK + + V +A+M+MY+K G L + F
Sbjct: 312 NALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIF 371
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
I KD + WN++++SF + G +EA +F+ M E V++
Sbjct: 372 GRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKY 412
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD++ D N + Y + + LF M S+ + TF VL +
Sbjct: 68 FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+Q+H L+++ G D P+V L+ +YSK LG++ + F + D+V WN ++ +
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGY 187
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+++G +A +F M ++
Sbjct: 188 VQNGFMDDASMLFNEMISAGIK 209
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YTF PV+ C+ L GK + ++++ G D + V ++L+ +Y+ G + ++ F +
Sbjct: 11 YTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDK 70
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ KD V WN +++ +++ G + A +F+ M
Sbjct: 71 MIDKDCVLWNVMINGYVQCGESDSAIKLFKDM 102
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 74/146 (50%), Gaps = 6/146 (4%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + DL N + Y ++ LF M S + + TFT L + +
Sbjct: 167 KLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESS 226
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK---DVVTWNA 147
+ ++ K++H +++ G + + +AL+D+Y K ++V A K D+V + A
Sbjct: 227 SLKQIKEIHGYIVRHGVILDVYLNSALIDLYFK---CRDAVMACKMFNLSTKFDIVIYTA 283
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++S ++ +G+ K+A +F+ + ++++
Sbjct: 284 MISGYVLNGMNKDALEIFRWLLQKKM 309
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 50 SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDS 109
+T+S F F M ++ + +T++ +L ACS++ A + GKQ+H+ ++ G ++
Sbjct: 291 GFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLEN 350
Query: 110 EPVVKTALMDMYSK-YGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ V +L+DMY K ++ ++V AF+ I +V++W +L++ F HGL +E+ VF AM
Sbjct: 351 DVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAM 410
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C +A+A Q+FDE+ D++S + +Y + N LF M +
Sbjct: 63 CFGVAEA--------RQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYP 114
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + L +CSAL G + AL+ K G DS PV+ +AL+D YSK G E+ F
Sbjct: 115 NEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVF 174
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ + D+V+W ++SSF+ G +A ++ M + V
Sbjct: 175 EYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGV 213
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 6/169 (3%)
Query: 12 AKTCISIADALPKRYVYTHQVFDE------ISHGDLSSLNSQLFSYTRSRNFPATWALFC 65
A + + +AL Y V D + H D+ + S ++ N +
Sbjct: 450 ADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIIT 509
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
+M+ + + ++ L A + +P E GKQ+H +K G S V L+D+Y K G
Sbjct: 510 HMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCG 569
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ +F EI D V+WN L+ +G A F+ M VE
Sbjct: 570 CIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVE 618
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 59/113 (52%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F M + ++T + +LGAC + + + +++H +IK D++ VV AL+D Y+
Sbjct: 406 VFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYA 465
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
G++ ++ ++ +DV+T+ +L + + G + A + M ++ V
Sbjct: 466 GLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRM 518
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 70/139 (50%), Gaps = 1/139 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF+ +++GD+ S + S+ + ++ L+ M T + +TF +L A S L
Sbjct: 171 YRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFL 230
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
GK VHA ++ + V+KTAL+DMY K + ++V+ K DV W A++
Sbjct: 231 -GLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLEYDVFLWTAII 289
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S F + +EA F M
Sbjct: 290 SGFTQSLKFREAITAFHEM 308
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G +H+ +IK G + + L+ +Y K + E+ + F E+ +DV +W L+S++ +
Sbjct: 34 GICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGK 93
Query: 155 HGLAKEAFGVFQAM 168
G +EA +F +M
Sbjct: 94 IGNHEEALELFDSM 107
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 65/124 (52%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L Y + + LFC M + +T T VL C+ ++G+ +H+L+IK
Sbjct: 283 NVLLNGYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIK 342
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G + + L+DMYSK GL +++ FK I+ D+V W+AL++ + G ++E+ +
Sbjct: 343 CGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKL 402
Query: 165 FQAM 168
F M
Sbjct: 403 FHLM 406
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 6/168 (3%)
Query: 13 KTCISIADALPKRYVYTHQVFD------EISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+T +++++AL Y+ V D + DL S N+ L + +F +
Sbjct: 447 ETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYH 506
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M YTF +LG+CS L G+QVHA +IK D V TAL+DMY+K
Sbjct: 507 MLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMY 566
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L ++ AF + +D+ TW +++++ + ++A F+ M +E V+
Sbjct: 567 LEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVK 614
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 71/141 (50%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ +S DL + + +Y ++ F M + +T L CS+L +
Sbjct: 574 FNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL 633
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E G+Q+H+++ K G S+ V +AL+DMY+K G + E+ F+ + +D + WN ++ +
Sbjct: 634 EGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIRRDTIAWNTIICGY 693
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
++G +A F+ M E +
Sbjct: 694 AQNGQGNKALTAFRMMLDEGI 714
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + +T L ACS A + GKQ+HA K G + V +AL+D+Y+
Sbjct: 200 LFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFVGSALVDLYA 259
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G + + + F + ++ VTWN LL+ + + G +F +M V+
Sbjct: 260 KCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTGVLKLFCSMMELDVK 311
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 48/95 (50%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
YT +L A + + G+ +HA + K G +++ V AL+ MY K G + + + ++
Sbjct: 416 YTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYES 475
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ +D+++WNA LS G+ +F M E
Sbjct: 476 MVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEE 510
Score = 43.1 bits (100), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/95 (22%), Positives = 49/95 (51%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
++ +L C++ + K +H L++K + + + +L+++Y+K + ++
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+DVV+W AL+ + G A ++ +FQ M E +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGI 209
>gi|356510733|ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
mitochondrial-like [Glycine max]
Length = 649
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 2/142 (1%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F+ + H +L S N+ + Y ++ ++ LF M +T + V+ + L
Sbjct: 362 FERMPHKNLISWNTIIAGYEKNEDYKGAIKLFSEMQLEGERPDKHTLSSVISVSTGLVDL 421
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSS 151
GKQ+H L+ K P+ +L+ MYS+ G + ++ F EI+ +KDV+TWNA++
Sbjct: 422 YLGKQLHQLVTKTVLPDSPI-NNSLITMYSRCGAIVDACTVFNEIKLYKDVITWNAMIGG 480
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG A EA +F+ M R ++
Sbjct: 481 YASHGSAAEALELFKLMKRLKI 502
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 15/161 (9%)
Query: 15 CISIADALPKRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C +I DA VF+EI + D+ + N+ + Y + LF M ++
Sbjct: 452 CGAIVDACT--------VFNEIKLYKDVITWNAMIGGYASHGSAAEALELFKLMKRLKIH 503
Query: 74 LTAYTFTPVLGACSALPAPERG-KQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGES 130
T TF VL AC+ E G +Q +++ G EP V+ +L+D+ + G L E+
Sbjct: 504 PTYITFISVLNACAHAGLVEEGWRQFKSMINDYGI--EPRVEHFASLVDILGRQGQLQEA 561
Query: 131 VEAFKEIEFK-DVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
++ + FK D W ALL + H + A A+ R
Sbjct: 562 MDLINTMPFKPDKAVWGALLGACRVHNNVELALVAADALIR 602
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM---HSTCLNLTAYTFTPVLGACSA 88
+FD + D + NS + Y + R LF M NL + +C
Sbjct: 60 LFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRDVVSWNLIVSGYF----SCCG 115
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E G+++ LM + + V ++ Y+K G + ++++ F + + V++NA+
Sbjct: 116 SRFVEEGRRLFELMPQ----RDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAV 171
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
++ FL +G + A G F+ M
Sbjct: 172 ITGFLLNGDVESAVGFFRTM 191
>gi|357486999|ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VFD+I + + N+ + S R+ ALF + L T T VL +C+
Sbjct: 166 SRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCAL 225
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
L + + G+ +H + K G D V T L+DMY+K G L ++V F+++ +D W+A+
Sbjct: 226 LGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAWSAI 285
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++ HG +A + M +E+V+
Sbjct: 286 IVAYATHGDGFQAISMLNEMKKEKVQ 311
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ HQ+FD+I+ ++ N+ Y R N P L + + F L S
Sbjct: 79 HAHQLFDQITQPNIVLFNTMARGYAR-LNDP-------------LRMITH-FRRCLRLVS 123
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ A GKQ+H +K G V L++MY+ G + S F +I+ VV +NA
Sbjct: 124 KVKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNA 183
Query: 148 LLSSFLRHGLAKEAFGVFQAM 168
++ S R+ A EA +F+ +
Sbjct: 184 IIMSLARNNRANEALALFREL 204
>gi|357129081|ref|XP_003566196.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Brachypodium distachyon]
Length = 505
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 5/165 (3%)
Query: 12 AKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
A+ ++ DA K + H +VFDE D+ N L Y+ +WALF M
Sbjct: 40 ARLATALTDAYAKSALVKHARRVFDETPRRDIVLWNVMLSCYSSQGLLHHSWALFTSMQR 99
Query: 70 TC-LNLTAYTFTPVLGACSALPAPER--GKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
T L+ +TF+ +L A + A + G H L+++ G + VV TAL+DMY+K G
Sbjct: 100 TSGLSGDGFTFSALLSARAPSSACSQHLGLLAHGLVLRLGLHLDLVVATALLDMYAKSGR 159
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ ++ + F + + V+WNA++ + H EA +F +M R
Sbjct: 160 VTDARQVFDAMLLRSTVSWNAIIVCYGHHAGGSEALQIFVSMLRN 204
Score = 64.7 bits (156), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 4/155 (2%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM----HSTCLNLTAYTFT 80
R QVFD + S N+ + Y +F M C T
Sbjct: 159 RVTDARQVFDAMLLRSTVSWNAIIVCYGHHAGGSEALQIFVSMLRNDDGCCCQPDELTLA 218
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L +C+ + A Q+HA +K G V AL+ Y K G L ++ + F +
Sbjct: 219 SLLSSCANMAAAYEATQIHAYALKRGLQGFLQVANALVMAYGKNGFLQQATQTFATLHNP 278
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
D+V+W++++SSF G AK A VF+ M ++ V
Sbjct: 279 DIVSWSSMVSSFAYLGRAKSAIHVFERMIQQGVRL 313
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V +AL A R +H L+IK G S+ + TAL D Y+K L+ + F E +D
Sbjct: 14 VTAGATALHACAR---IHPLLIKSGHASDARLATALTDAYAKSALVKHARRVFDETPRRD 70
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+V WN +LS + GL ++ +F +M R
Sbjct: 71 IVLWNVMLSCYSSQGLLHHSWALFTSMQR 99
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ I H D+ + + Y +S + +F M + + ++ + VL AC+ +
Sbjct: 308 VFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAF 367
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G+Q+H L+IK G +SE V ALMD+Y+K + S+E F+ + + V+WN ++
Sbjct: 368 LDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVG 427
Query: 152 FLRHGLAKEAFGVFQAM 168
+ + G A++A VFQ M
Sbjct: 428 YCQSGFAEDALSVFQEM 444
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 77/140 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + S N+ + Y +S ++F M + + T TF+ VL AC+
Sbjct: 408 EIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTA 467
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + Q+H+L+ K +++ +V +L+D Y+K G + ++++ F+ I DVV+WNA++S
Sbjct: 468 SIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIIS 527
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ HG A +A +F M +
Sbjct: 528 GYALHGRATDALELFNRMNK 547
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD I D + + + Y+ + F M + T VL A L +
Sbjct: 207 VFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSS 266
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
GK +H +K D+EP V AL+DMY+K G + ++ F+ I DV+ W+ L+S
Sbjct: 267 AVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISR 326
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ + ++AF +F M R V
Sbjct: 327 YAQSYQNEQAFEMFLRMMRSSV 348
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + ++ S + + Y F LF + + + T +L A+
Sbjct: 105 RLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMD 164
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
AP +HA K G D V ++L+D YS G + + F I +KD VTW A++S
Sbjct: 165 APGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVS 224
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + + ++A F M
Sbjct: 225 CYSENDIPEDALNTFSKM 242
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGESV 131
L +Y +L C A G+ VHA +++ G + L+++Y+K G L +
Sbjct: 45 LDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAAR 104
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F + +++V++ L+ + G +EA G+F+ + RE
Sbjct: 105 RLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQRE 144
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 78/140 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F+ + D+ + +S + R + ++LF M L + + + VL ACS+L
Sbjct: 398 RLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLA 457
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + GKQVH+L +K G +SE VV TAL+DMY+K G + +++ F + D ++W +++
Sbjct: 458 SHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIV 517
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
++G A+EA + M
Sbjct: 518 GCAQNGRAEEAISLLHKMIE 537
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHA 100
L+ NS L + + ++ ++ +MH + + YTF+ VL C QVH
Sbjct: 307 LALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHG 366
Query: 101 LMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKE 160
+I G + + VV + L+D+Y+K G + ++ F+ + KDVV W++L++ R G K
Sbjct: 367 FVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKL 426
Query: 161 AFGVFQAM 168
AF +F M
Sbjct: 427 AFSLFMDM 434
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 9/155 (5%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLN 73
C SI DA +FDE+ H ++ S + + T S +L+ M S
Sbjct: 51 CSSIIDA--------RNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQ 102
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ ++ VL AC + E GK VH + + D + V+ AL+DMY K G L ++
Sbjct: 103 PNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRV 162
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F EI K+ +WN L+ + + GL +A +F M
Sbjct: 163 FCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKM 197
Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 8/151 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD++ D+ S NS + + + A MH L + +TF VL AC
Sbjct: 192 KLFDKMPEPDIVSWNSIIAGLVDNASSRAL-RFVSMMHGKGLKMDEFTFPSVLKACGCSD 250
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD------VVT 144
G+++H +IK G +S +AL+DMYS LL E+ + F + F++ +
Sbjct: 251 ELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQY-FRNSSVSESLAL 309
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
WN++LS + +G EA + M R V F
Sbjct: 310 WNSMLSGHVVNGDYVEALSMISHMHRSGVRF 340
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 43/89 (48%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + + K +H+ +IK G + + ++ +YSK + ++ F E+ +++V+W
Sbjct: 13 CIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSW 72
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S + EA ++ M ++E
Sbjct: 73 TTMVSVLTNSSMPHEALSLYNEMIESKIE 101
>gi|387169524|gb|AFJ66185.1| hypothetical protein 11M19.3 [Arabidopsis halleri]
Length = 511
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSAL 89
+V S ++ + N + Y R+ + M S + + ++F L AC+ L
Sbjct: 96 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKTLKNMLSFSDIKPNKFSFASSLAACARL 155
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K VH+LMI G + ++ +AL+D+Y+K G + S E F ++ DV WNA++
Sbjct: 156 GDLHHAKWVHSLMIDAGIELNAILSSALVDVYAKCGDIETSREVFYSVKRNDVSIWNAMI 215
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F HGLA EA VF M E V
Sbjct: 216 TGFATHGLATEAIRVFSEMEAEHV 239
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,660,677,197
Number of Sequences: 23463169
Number of extensions: 103594266
Number of successful extensions: 315797
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5602
Number of HSP's successfully gapped in prelim test: 1166
Number of HSP's that attempted gapping in prelim test: 282539
Number of HSP's gapped (non-prelim): 27987
length of query: 175
length of database: 8,064,228,071
effective HSP length: 132
effective length of query: 43
effective length of database: 9,262,057,059
effective search space: 398268453537
effective search space used: 398268453537
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)