BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045063
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJY9|PP448_ARATH Pentatricopeptide repeat-containing protein At5g66500,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E38 PE=2
SV=1
Length = 532
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 118/174 (67%), Gaps = 2/174 (1%)
Query: 4 FIRMTNFPAKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
FIR+ N K+ + + R TH +FDE+ DLSSLNSQL S+ RS N T
Sbjct: 10 FIRLGNVTVKSTNLVLRCVFIRNFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTL 69
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
ALF +H +L+++TFTPVLGACS L PE G+QVHALMIK G ++ + KTAL+DMY
Sbjct: 70 ALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMY 129
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
SKYG L +SV F+ +E KD+V+WNALLS FLR+G KEA GVF AM RERVE
Sbjct: 130 SKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEI 183
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 80/143 (55%), Gaps = 5/143 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+ + DL S N+ L + R+ +F M+ + ++ +T + V+ C++L
Sbjct: 140 RVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLK 199
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
++GKQVHA+++ G D V+ TA++ YS GL+ E+++ + + D V N+L+
Sbjct: 200 ILQQGKQVHAMVVVTGRDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLI 258
Query: 150 SSFLRHGLAKEAFGVFQAMTRER 172
S +R+ KEAF + M+R+R
Sbjct: 259 SGCIRNRNYKEAFLL---MSRQR 278
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 6/142 (4%)
Query: 31 QVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V++ ++ H D LNS + R+RN+ + L + L CS
Sbjct: 240 KVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPN-----VRVLSSSLAGCSDN 294
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
GKQ+H + ++ G S+ + LMDMY K G + ++ F+ I K VV+W +++
Sbjct: 295 SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMI 354
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
++ +G +A +F+ M E
Sbjct: 355 DAYAVNGDGVKALEIFREMCEE 376
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 84/172 (48%), Gaps = 17/172 (9%)
Query: 20 DALPKRYVYT-----------------HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
D +P+R +YT +F + D + NS + + +
Sbjct: 79 DKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALC 138
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
F MH L Y+F VL ACS L +G QVH+L+ K S+ + +AL+DMYS
Sbjct: 139 YFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYS 198
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K G + ++ F E+ ++VV+WN+L++ F ++G A EA VFQ M RVE
Sbjct: 199 KCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVE 250
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 6/143 (4%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F +++ ++ S N+ + YT++ +LFC + + T Y+F +L AC+ L
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAE 401
Query: 92 PERGKQVHALMIK------GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
G Q H ++K G + + V +L+DMY K G + E F+++ +D V+W
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
NA++ F ++G EA +F+ M
Sbjct: 462 NAMIIGFAQNGYGNEALELFREM 484
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 36/178 (20%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACS 87
+VFDE+ ++ S NS + + +N PA AL F M + + T V+ AC+
Sbjct: 207 QRVFDEMGDRNVVSWNSLITCF--EQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA 264
Query: 88 ALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGE----------------- 129
+L A + G++VH ++K ++ ++ A +DMY+K + E
Sbjct: 265 SLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAET 324
Query: 130 ----------SVEA----FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S +A F ++ ++VV+WNAL++ + ++G +EA +F + RE V
Sbjct: 325 SMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESV 382
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 44/73 (60%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+ VHA +IK G +E ++ L+D YSK G L + + F ++ +++ TWN++++ +
Sbjct: 40 RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKL 99
Query: 156 GLAKEAFGVFQAM 168
G EA +F++M
Sbjct: 100 GFLDEADSLFRSM 112
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 5 IRMTNFPAKTCISIADALPKRYV-----------YTHQVFDEISHGDLSSLNSQLFSYTR 53
+ +T+ A C SI+D + Y + +FDE+ D S N+ + YT
Sbjct: 19 LSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTS 78
Query: 54 SRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVV 113
W LF M + ++ Y+F+ +L +++ + G+QVH L+IKGG + V
Sbjct: 79 CGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYV 138
Query: 114 KTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++L+DMY+K + ++ EAFKEI + V+WNAL++ F++ K AF + M
Sbjct: 139 GSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLM 193
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 77/145 (53%), Gaps = 1/145 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + DL S NS + + + F Y+ S+ + + Y F+ +L +CS L
Sbjct: 364 LFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLAT 423
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALLS 150
+ G+Q+HAL K G S V ++L+ MYSK G++ + + F++I K V WNA++
Sbjct: 424 LQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMIL 483
Query: 151 SFLRHGLAKEAFGVFQAMTRERVEF 175
+ +HGL + + +F M + V+
Sbjct: 484 GYAQHGLGQVSLDLFSQMCNQNVKL 508
Score = 73.2 bits (178), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 84/163 (51%), Gaps = 11/163 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C S++DA +VFD + DL S NS + +++ + + LF M +
Sbjct: 251 CGSVSDA--------KRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVE 302
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKY--GLLGESV 131
YT+T +L ACS GK +H ++IK G + AL+ MY ++ G + +++
Sbjct: 303 TDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDAL 362
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F+ ++ KD+++WN++++ F + GL+++A F + ++
Sbjct: 363 SLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIK 405
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H IK G+ S+ V ++D Y K+G LG + F E+ +D V+WN ++S + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 159 KEAFGVFQAMTR 170
++A+ +F M R
Sbjct: 83 EDAWCLFTCMKR 94
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD++ D S + + Y++S + LF M L +F+ L C+ +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A E GKQ+H ++KGG ++ V AL+ MY K G + E+ + FKE+ KD+V+WN +++
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
+ RHG + A F++M RE
Sbjct: 484 GYSRHGFGEVALRFFESMKRE 504
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 57/142 (40%), Gaps = 12/142 (8%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--HSTCLNLTAYTFTPVLGACS 87
++FDE+ DL S N + Y R+RN LF M C ++ +L +
Sbjct: 115 RKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVC------SWNTMLSGYA 168
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + V M + V AL+ Y + + E+ FK E +V+WN
Sbjct: 169 QNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNC 224
Query: 148 LLSSFLRHGLAKEAFGVFQAMT 169
LL F++ EA F +M
Sbjct: 225 LLGGFVKKKKIVEARQFFDSMN 246
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 11/144 (7%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S N+ L +Y ++ C + + N ++ +LG
Sbjct: 179 VFDRMPEKNDVSWNALLSAYVQNSKMEEA----CMLFKSRENWALVSWNCLLGG-----F 229
Query: 92 PERGKQVHALMIKGGTDSEPVVK-TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
++ K V A + VV ++ Y++ G + E+ + F E +DV TW A++S
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
++++ + +EA +F M ER E
Sbjct: 290 GYIQNRMVEEARELFDKMP-ERNE 312
Score = 32.7 bits (73), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 108 DSEPVVK----TALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFL---RHGLAKE 160
D PV TA++ Y + ++ E+ E F ++ ++ V+WNA+L+ ++ R +AKE
Sbjct: 274 DESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKE 333
Query: 161 AFGVF 165
F V
Sbjct: 334 LFDVM 338
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
D+ WN +SS++R G EA VF+ M R
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPR 92
>sp|Q9SX45|PPR75_ARATH Pentatricopeptide repeat-containing protein At1g50270
OS=Arabidopsis thaliana GN=PCMP-E42 PE=2 SV=1
Length = 596
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%)
Query: 26 YVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
Y +VFDE+ ++ + + + Y +SR F +F M + + T + VL A
Sbjct: 256 YDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSA 315
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C+ + A RG++VH MIK + T L+D+Y K G L E++ F+ + K+V TW
Sbjct: 316 CAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTW 375
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERV 173
A+++ F HG A++AF +F M V
Sbjct: 376 TAMINGFAAHGYARDAFDLFYTMLSSHV 403
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ +TF P+L A L Q HA ++K G DS+P V+ +L+ YS GL + F
Sbjct: 103 SRHTFPPLLKAVFKL-RDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLF 161
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E KDVVTW A++ F+R+G A EA F M + V
Sbjct: 162 DGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGV 200
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 1/147 (0%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD D+ + + + + R+ + F M T + T VL A
Sbjct: 156 FASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAG 215
Query: 88 ALPAPERGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G+ VH L ++ G + + ++L+DMY K ++ + F E+ ++VVTW
Sbjct: 216 KVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWT 275
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
AL++ +++ + VF+ M + V
Sbjct: 276 ALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK--TALMDM 120
LF M S+ ++ TF VL AC+ E G+++ L +KG + EP ++D+
Sbjct: 394 LFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEPKADHYACMVDL 452
Query: 121 YSKYGLLGESVEAFKEIEFKDV-VTWNALLSSFLRH 155
+ + GLL E+ + + + V W AL S L H
Sbjct: 453 FGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLH 488
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 86.7 bits (213), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 78/146 (53%), Gaps = 1/146 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF I D+ + ++ L Y ++ A +F + + +TF+ +L C+A
Sbjct: 449 KVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATN 508
Query: 91 AP-ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +GKQ H IK DS V +AL+ MY+K G + + E FK KD+V+WN+++
Sbjct: 509 ASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMI 568
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S + +HG A +A VF+ M + +V+
Sbjct: 569 SGYAQHGQAMKALDVFKEMKKRKVKM 594
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VFDE+ ++ + + + Y R+ LF M + ++TF LG +
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RG QVH +++K G D V +L+++Y K G + ++ F + E K VVTWN+++
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 267
Query: 150 SSFLRHGLAKEAFGVFQAM 168
S + +GL EA G+F +M
Sbjct: 268 SGYAANGLDLEALGMFYSM 286
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 67/147 (45%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R H +FD+ D S S LF ++R LF +H + + F+ VL
Sbjct: 42 RLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLK 101
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ L G+Q+H IK G + V T+L+D Y K + + F E++ ++VVT
Sbjct: 102 VSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVT 161
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
W L+S + R+ + E +F M E
Sbjct: 162 WTTLISGYARNSMNDEVLTLFMRMQNE 188
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 15 CISIADALPKRYVYTHQVFDEISH-GDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLN 73
C ++ DAL ++F EI G++ S + + + ++ LF M +
Sbjct: 343 CTAMLDAL--------RLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+T++ +L A + E VHA ++K + V TAL+D Y K G + E+ +
Sbjct: 395 PNEFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
F I+ KD+V W+A+L+ + + G + A +F +T+
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTK 487
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+ + + NS + Y + +F M + L+ +F V+ C+ L
Sbjct: 251 LFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKE 310
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLS 150
+Q+H ++K G + ++TALM YSK + +++ FKEI +VV+W A++S
Sbjct: 311 LRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMIS 370
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
FL++ +EA +F M R+ V
Sbjct: 371 GFLQNDGKEEAVDLFSEMKRKGV 393
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+VF DL S NS + Y + +F M + + TF V AC+
Sbjct: 550 EEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHA 609
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEI 137
E G++ +M++ P + + ++D+YS+ G L ++++ + +
Sbjct: 610 GLVEEGEKYFDIMVR-DCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENM 658
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 76/141 (53%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
F++ GD + N+ + + +S N +F M+ ++ +TF + A S
Sbjct: 649 FEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANM 708
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
++GKQVHA++ K G DSE V AL+ MY+K G + ++ + F E+ K+ V+WNA+++++
Sbjct: 709 KQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAY 768
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
+HG EA F M V
Sbjct: 769 SKHGFGSEALDSFDQMIHSNV 789
Score = 70.1 bits (170), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 66/135 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S + + YT+ F M + T + AC+ L A + G+Q+H
Sbjct: 555 DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIH 614
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A G S+ + AL+ +YS+ G + ES AF++ E D + WNAL+S F + G +
Sbjct: 615 AQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Query: 160 EAFGVFQAMTRERVE 174
EA VF M RE ++
Sbjct: 675 EALRVFVRMNREGID 689
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 74/144 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD + D SS + + +++ LFC M+ + T Y F+ VL AC +
Sbjct: 243 RVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E G+Q+H L++K G S+ V AL+ +Y G L + F + +D VT+N L++
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLIN 362
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ G ++A +F+ M + +E
Sbjct: 363 GLSQCGYGEKAMELFKRMHLDGLE 386
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 71/147 (48%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ +F +S D + N+ + ++ LF MH L + T ++ AC
Sbjct: 340 ISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVAC 399
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
SA RG+Q+HA K G S ++ AL+++Y+K + +++ F E E ++VV WN
Sbjct: 400 SADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWN 459
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
+L ++ + +F +F+ M E +
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEI 486
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 58/124 (46%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +Y + ++ +F M + YT+ +L C L E G+Q+H+ +IK
Sbjct: 459 NVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIK 518
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
V + L+DMY+K G L + + KDVV+W +++ + ++ +A
Sbjct: 519 TNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 165 FQAM 168
F+ M
Sbjct: 579 FRQM 582
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGAC-SA 88
+VFDE+ + + N ++ SRN + LF M S + TF+ VL AC
Sbjct: 141 KVFDEMPERTIFTWN-KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
A + +Q+HA ++ G VV L+D+YS+ G + + F + KD +W A+
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S ++ EA +F M
Sbjct: 260 ISGLSKNECEAEAIRLFCDM 279
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%)
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
+ G+++H+ ++K G DS + L D Y G L + + F E+ + + TWN ++
Sbjct: 102 DEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL 161
Query: 153 LRHGLAKEAFGVFQAMTRERV 173
L E FG+F M E V
Sbjct: 162 ASRNLIGEVFGLFVRMVSENV 182
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 15 CISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
C SI+DA + F E+S + S N+ + +Y++ F M + +
Sbjct: 740 CGSISDA--------EKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 75 TAYTFTPVLGACSALPAPERG-KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
T VL ACS + ++G ++ + G +P ++DM ++ GLL + E
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 134 FKEIEFK-DVVTWNALLSSFLRH 155
+E+ K D + W LLS+ + H
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVH 874
>sp|Q9FGL1|PP423_ARATH Putative pentatricopeptide repeat-containing protein At5g47460
OS=Arabidopsis thaliana GN=PCMP-E103 PE=3 SV=1
Length = 576
Score = 84.7 bits (208), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 9/157 (5%)
Query: 13 KTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCL 72
KT S+ DA H+VFDE+ D+ S NS + Y +S F LF +H + +
Sbjct: 101 KTSDSLEDA--------HKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDV 152
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTD-SEPVVKTALMDMYSKYGLLGESV 131
++FT L AC+ L G +H+ ++K G + VV L+DMY K G + ++V
Sbjct: 153 FPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAV 212
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F+ +E KD V+WNA+++S R+G + F M
Sbjct: 213 LVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM 249
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 2/171 (1%)
Query: 4 FIRMTNFPAKTCISIADALPKRYVYTH--QVFDEISHGDLSSLNSQLFSYTRSRNFPATW 61
F +M N T + DA K + + QV ++ + + SS N+ L Y S
Sbjct: 246 FHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEAT 305
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
F MHS+ + Y+ + VL A +AL G +HA K G DS VV +AL+DMY
Sbjct: 306 EFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMY 365
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRER 172
SK G+L + F + K+++ WN ++S + R+G + EA +F + +ER
Sbjct: 366 SKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQER 416
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRH 155
+Q+H + K G S + +LM Y L ++ + F E+ DV++WN+L+S +++
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQS 134
Query: 156 GLAKEAFGVFQAMTRERV 173
G +E +F + R V
Sbjct: 135 GRFQEGICLFLELHRSDV 152
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 8/170 (4%)
Query: 6 RMTNFPAKTCISIADALPKRY------VYTHQVFDEISHGDLSSLNSQLF-SYTRSRNFP 58
RM F + AL Y +Y +VFD+ +H LN+ + +Y + ++F
Sbjct: 262 RMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDD-THAQNIFLNTTIMDAYFQDKSFE 320
Query: 59 ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
LF M + + YTF +L + + L ++G +H L++K G + +V AL+
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALV 380
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+MY+K G + ++ +AF + F+D+VTWN ++S HGL +EA F M
Sbjct: 381 NMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRM 430
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+ T V +CS E GKQ H +K G S V+ L+ MYS GE++ +
Sbjct: 137 FVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDD 196
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ + D+ +++ LS +L G KE V + E
Sbjct: 197 LPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANE 231
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 60/143 (41%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+V D++ + DLS +S L Y F + + T+ L S L
Sbjct: 192 RVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLR 251
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
QVH+ M++ G ++E AL++MY K G + + F + +++ ++
Sbjct: 252 DLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMD 311
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
++ + +EA +F M + V
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEV 334
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 84.3 bits (207), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 75/141 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ + + +S + Y +++N+ L+ L +T + V+ ACS L
Sbjct: 218 QVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLA 277
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GKQ+HA++ K G S V ++ +DMY+K G L ES F E++ K++ WN ++S
Sbjct: 278 ALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIIS 337
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F +H KE +F+ M ++
Sbjct: 338 GFAKHARPKEVMILFEKMQQD 358
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 81/148 (54%), Gaps = 3/148 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFD + L S N+ + YTR+R +F M + + +T + VL AC
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
K++H L +K D V TAL+D+Y+K G++ ++V+ F+ ++ K VTW+++++
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 151 SFLRHGLAKEAFGVF---QAMTRERVEF 175
++++ +EA ++ Q M+ E+ +F
Sbjct: 237 GYVQNKNYEEALLLYRRAQRMSLEQNQF 264
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
+L C+ A K H +I+ + + + L++ YSK G + + + F + +
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+V+WN ++ + R+ + EA +F M E +F
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKF 160
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F E+ +L N+ + + + LF M ++ TF+ +L C
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 92 PERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT-WNALL 149
E G++ LM G V + ++D+ + GLL E+ E K I F + W +LL
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 150 SS 151
+S
Sbjct: 440 AS 441
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FDEI D+ S N+ + Y + N+ LF M T + T V+ AC+
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVH + G S + AL+D+YSK G L + F+ + +KDV++WN L+
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLI 339
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
+ L KEA +FQ M R
Sbjct: 340 GGYTHMNLYKEALLLFQEMLR 360
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VF I +L N+ + S + + L+ M S L +YTF VL +C+
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA-------------- 133
A + G+Q+H ++K G D + V T+L+ MY + G L ++ +
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 134 -----------------FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
F EI KDVV+WNA++S + G KEA +F+ M + V
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 2/145 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+F+ + + D+ S N+ + YT + LF M + T +L AC+ L A
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 92 PERGKQVHALMIK--GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ G+ +H + K G + ++T+L+DMY+K G + + + F I K + +WNA++
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F HG A +F +F M + ++
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQ 467
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQVF+ I H LSS N+ +F + A++ LF M + TF +L ACS
Sbjct: 424 HQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHS 483
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
+ G+ + M + + + M D+ GL E+ E +E + D V W +
Sbjct: 484 GMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCS 543
Query: 148 LLSSFLRHG 156
LL + HG
Sbjct: 544 LLKACKMHG 552
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRN 56
F+ + F + +I +L YV + FD+I + S +S + Y +
Sbjct: 234 GFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGE 293
Query: 57 FPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTA 116
F LF + + ++ + ++G + +GKQ+ AL +K + E V +
Sbjct: 294 FVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNS 353
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++DMY K GL+ E+ + F E++ KDV++W +++ + +HGL K++ +F M R +E
Sbjct: 354 VVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIE 411
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 76/145 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VFD + ++ S ++ + + + + + +LF M + +TF+ L AC L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A E+G Q+H +K G + V +L+DMYSK G + E+ + F+ I + +++WNA++
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F+ G +A F M ++
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIK 205
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 6/158 (3%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K R +VF I L S N+ + + + F M +
Sbjct: 147 SLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKE 206
Query: 75 --TAYTFTPVLGACSALPAPERGKQVHALMIKGG--TDSEPVVKTALMDMYSKYGLLGES 130
+T T +L ACS+ GKQ+H +++ G S + +L+D+Y K G L +
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+AF +I+ K +++W++L+ + + G EA G+F+ +
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+L C+ ++G QVH ++K G+ + L+DMY K + + F +
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
++VV+W+AL+S + +G K + +F M R+ +
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGI 103
>sp|O49399|PP321_ARATH Pentatricopeptide repeat-containing protein At4g18840
OS=Arabidopsis thaliana GN=PCMP-E101 PE=3 SV=2
Length = 545
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSAL 89
+VFD + D+ S N+ + +Y + +F M + +T VL AC++L
Sbjct: 258 EVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASL 317
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +G+ VH + K G + E + TAL+DMYSK G + +++E F+ +DV TWN+++
Sbjct: 318 GSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSII 377
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
S HGL K+A +F M E
Sbjct: 378 SDLSVHGLGKDALEIFSEMVYE 399
Score = 83.2 bits (204), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%)
Query: 23 PKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPV 82
PK Y H + + I + + NS + +Y S +F M + Y+FT V
Sbjct: 87 PKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFV 146
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L AC+A E G+Q+H L IK G ++ V+ L+++Y + G + + + +D
Sbjct: 147 LKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDA 206
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V+WN+LLS++L GL EA +F M VE
Sbjct: 207 VSWNSLLSAYLEKGLVDEARALFDEMEERNVE 238
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 117 LMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++ Y+ GL+ E+ E F + +DVV+WNA+++++ G E VF M + E
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTE 300
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFD + + S N+ + + R LF M + +++ + GACS+
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GK VHA MIK G L+DMY+K G + ++ + F + +DVV+WN+LL++
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ +HG KEA F+ M R
Sbjct: 338 YAQHGFGKEAVWWFEEMRR 356
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 72/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+++ D + + + Y++ F M + +T + V+ A +A
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G Q+H +K G DS V +AL+D+Y++YGL+ ++ F +E ++ V+WNAL++
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
R ++A +FQ M R+
Sbjct: 236 GHARRSGTEKALELFQGMLRD 256
Score = 50.1 bits (118), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%)
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ +G+ VHA +++ + V+ L++MY+K G L E+ + F+++
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+D VTW L+S + +H +A F M R
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
>sp|Q9SB36|PP337_ARATH Pentatricopeptide repeat-containing protein At4g25270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E53 PE=3
SV=1
Length = 527
Score = 83.2 bits (204), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 30 HQVFDEISHGDLS--SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
H+VFD +S D S + NS + Y + AL+ M + +TF VL AC
Sbjct: 147 HEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACG 206
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ + + G+ +H ++K G + V AL+ MY+K G + ++ F I KD V+WN+
Sbjct: 207 GIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNS 266
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+L+ +L HGL EA +F+ M + +E
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIE 293
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 6/144 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V VFD I H D S NS L Y +F M + + VL
Sbjct: 247 VKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARV 306
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ + G+Q+H +I+ G + E V AL+ +YSK G LG++ F ++ +D V+WN
Sbjct: 307 LSF---KHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWN 363
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTR 170
A++S+ H F+ M R
Sbjct: 364 AIISA---HSKNSNGLKYFEQMHR 384
Score = 38.9 bits (89), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 16 ISIADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+A+AL Y Q +FD++ D S N+ + +++++ N F MH
Sbjct: 328 LSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSN---GLKYFEQMHR 384
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLG 128
TF VL C+ E G+++ +LM K G D + ++++Y + G++
Sbjct: 385 ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMME 444
Query: 129 ESVEAF-KEIEFKDVVT-WNALLSSFLRHG 156
E+ +E+ + T W ALL + HG
Sbjct: 445 EAYSMIVQEMGLEAGPTVWGALLYACYLHG 474
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 79/147 (53%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R +++F+ +S D+ S NS + +S N A +F M + + + + L
Sbjct: 491 RMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALS 550
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
AC+ LP+ GK +H MIK S+ ++ L+DMY+K G L ++ FK ++ K++V+
Sbjct: 551 ACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVS 610
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRE 171
WN+++++ HG K++ +F M +
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEK 637
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD + D N L Y + + F M ++ A TF VL C++
Sbjct: 194 KLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKL 253
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G Q+H L++ G D E +K +L+ MYSK G ++ + F+ + D VTWN ++S
Sbjct: 254 LIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMIS 313
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+++ GL +E+ F M V
Sbjct: 314 GYVQSGLMEESLTFFYEMISSGV 336
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/139 (20%), Positives = 68/139 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+F + + D+ + + Y + + + +F ++ ++ T +L L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A + G+++H +IK G D+ + A++DMY+K G + + E F+ + +D+V+WN+++
Sbjct: 455 LALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMI 514
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + A +F+ M
Sbjct: 515 TRCAQSDNPSAAIDIFRQM 533
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 71/149 (47%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R+ ++F +S D + N + Y +S + F M S+ + A TF+ +L
Sbjct: 289 RFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLP 348
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ S E KQ+H +++ + + +AL+D Y K + + F + DVV
Sbjct: 349 SVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVV 408
Query: 145 WNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ A++S +L +GL ++ +F+ + + ++
Sbjct: 409 FTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK- 140
+L ACS +GKQVHA +I + ++ MY+ G + + F ++ +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 141 -DVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ WN+++SSF+R+GL +A + M
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKM 129
Score = 40.0 bits (92), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLT--AYTFTPVLGACSALPAPERGKQVHALM 102
NS + S+ R N AL Y C ++ TF ++ AC AL + + +
Sbjct: 107 NSIISSFVR--NGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTV 164
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
G D V ++L+ Y +YG + + F + KD V WN +L+ + + G
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVI 224
Query: 163 GVFQAMTRERV 173
F M +++
Sbjct: 225 KGFSVMRMDQI 235
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 74/138 (53%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F E+S + S N+ + Y +++F +++T TF+ LGAC++L
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ + G QVH L IK + V +L+DMY+K G + + F E+E DV +WNAL+S
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ HGL ++A + M
Sbjct: 524 GYSTHGLGRQALRILDIM 541
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 71/143 (49%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ + + + ++ LF M + +T + +L C+
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G+Q+H L++K G D + V AL+D+Y+K + +V+ F E+ K+ V+WN ++
Sbjct: 363 CSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIV 422
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
+ G +AF +F+ R +V
Sbjct: 423 GYENLGEGGKAFSMFREALRNQV 445
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 61/137 (44%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+ I D+ + Y + F + L M YTF L A L A
Sbjct: 203 VFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGA 262
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ K VH ++K +P V L+ +Y++ G + ++ + F E+ DVV W+ +++
Sbjct: 263 FDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIAR 322
Query: 152 FLRHGLAKEAFGVFQAM 168
F ++G EA +F M
Sbjct: 323 FCQNGFCNEAVDLFIRM 339
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 62 ALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMY 121
L+ +H L + FT L +L E +H+ ++K G DS V AL++ Y
Sbjct: 132 GLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAY 191
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
S G + + F+ I KD+V W ++S ++ +G +++ + M
Sbjct: 192 SVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCM 238
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 75/151 (49%), Gaps = 8/151 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD D S NS + Y R L MH LNLT Y VL AC
Sbjct: 205 LFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLN 264
Query: 92 P---ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
E+G +H K G + + VV+TAL+DMY+K G L E+++ F + K+VVT+NA+
Sbjct: 265 EGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAM 324
Query: 149 LSSFLRHG-----LAKEAFGVFQAMTRERVE 174
+S FL+ + EAF +F M R +E
Sbjct: 325 ISGFLQMDEITDEASSEAFKLFMDMQRRGLE 355
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 76/138 (55%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q F S D++S S + + ++ + + LF + S+ + YT + ++ AC+
Sbjct: 414 QCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFA 473
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A G+Q+ IK G D+ VKT+ + MY+K G + + + F E++ DV T++A++S
Sbjct: 474 ALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMIS 533
Query: 151 SFLRHGLAKEAFGVFQAM 168
S +HG A EA +F++M
Sbjct: 534 SLAQHGSANEALNIFESM 551
Score = 79.7 bits (195), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ Q+FD + ++ S NS + YT+ + LF L L +T+ LG C
Sbjct: 100 FARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG 159
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ G+ +H L++ G + + L+DMYSK G L +++ F + +D V+WN+
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
L+S ++R G A+E + M R+
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRD 243
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 59/108 (54%)
Query: 61 WALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDM 120
+ LF M L + TF+ VL ACSA E G+Q+HAL+ K S+ + +AL+++
Sbjct: 343 FKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIEL 402
Query: 121 YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
Y+ G + ++ F +D+ +W +++ +++ + AF +F+ +
Sbjct: 403 YALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQL 450
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 39/71 (54%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
GK H MIK + + L++MY K LG + + F + ++++++N+L+S + +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 155 HGLAKEAFGVF 165
G ++A +F
Sbjct: 126 MGFYEQAMELF 136
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 4/125 (3%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+QVF E+ + D+++ ++ + S + + +F M + + F VL AC
Sbjct: 514 NQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHG 573
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFKD-VVTWN 146
+G + M K P K T L+D+ + G L ++ F+D VTW
Sbjct: 574 GLVTQGLKYFQCM-KNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWR 632
Query: 147 ALLSS 151
ALLSS
Sbjct: 633 ALLSS 637
>sp|Q9FI49|PP428_ARATH Pentatricopeptide repeat-containing protein At5g50990
OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2
Length = 534
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 1/144 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFP-ATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+V S ++ + N + Y R+ + A AL + T + ++F L AC+ L
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 178
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
K VH+LMI G + ++ +AL+D+Y+K G +G S E F ++ DV WNA++
Sbjct: 179 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 238
Query: 150 SSFLRHGLAKEAFGVFQAMTRERV 173
+ F HGLA EA VF M E V
Sbjct: 239 TGFATHGLATEAIRVFSEMEAEHV 262
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ +VF + D+S N+ + + +F M + ++ + TF +L CS
Sbjct: 219 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 278
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTW 145
E GK+ LM + + +P ++ A++D+ + G + E+ E + + + DVV W
Sbjct: 279 CGLLEEGKEYFGLMSRRFS-IQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 146 NALLSS 151
+LLSS
Sbjct: 338 RSLLSS 343
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 75/140 (53%), Gaps = 2/140 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPA-TWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD + L S N+ + Y ++ FP +F M + L + PV GACS LP
Sbjct: 553 LFDAMEDKSLVSWNTVITGYLQN-GFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLP 611
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ G++ HA +K + + + +L+DMY+K G + +S + F ++ K +WNA++
Sbjct: 612 SLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIM 671
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+ HGLAKEA +F+ M R
Sbjct: 672 GYGIHGLAKEAIKLFEEMQR 691
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 73/141 (51%), Gaps = 1/141 (0%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSALP 90
VFD + +L N+ + SY+R+ + F M ST L +T+ V+ AC+ +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G VH L++K G + V AL+ Y +G + ++++ F + +++V+WN+++
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
F +G ++E+F + M E
Sbjct: 262 VFSDNGFSEESFLLLGEMMEE 282
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 70/142 (49%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF I ++S N+ + + +S + + M + L ++T +L ACS
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + GK+VH +I+ + + V +++ +Y G L F +E K +V+WN
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 148 LLSSFLRHGLAKEAFGVFQAMT 169
+++ +L++G A GVF+ M
Sbjct: 568 VITGYLQNGFPDRALGVFRQMV 589
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL C+ GK VH +K D E V+ ALMDMYSK G + + FK
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
K+VV+WN ++ F G F V + M
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQM 384
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 93 ERGKQVHALMIKGGTD--SEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E G+++H L + G T ++ V+ T ++ MY+ G +S F + K++ WNA++S
Sbjct: 101 EMGRKIHQL-VSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 151 SFLRHGLAKEAFGVFQAM 168
S+ R+ L E F M
Sbjct: 160 SYSRNELYDEVLETFIEM 177
>sp|Q9LT48|PP244_ARATH Pentatricopeptide repeat-containing protein At3g20730
OS=Arabidopsis thaliana GN=PCMP-E94 PE=2 SV=1
Length = 565
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 75/144 (52%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
+ ++FD IS D+ S + + ++R P LF MH + +T+ VL +C
Sbjct: 66 HARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCK 125
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L + G Q+H + KG +V++AL+ +Y++ G + E+ F ++ +D+V+WNA
Sbjct: 126 DLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNA 185
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRE 171
++ + + A +F +FQ M E
Sbjct: 186 MIDGYTANACADTSFSLFQLMLTE 209
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDS-EPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ +L C+ + + G+Q+H +K + + +L+DMY+K G + ++V AF+E++
Sbjct: 321 SSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK 380
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KDV +W +L++ + RHG ++A ++ M ER++
Sbjct: 381 EKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 416
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
L+ + L CS ++ +H I G S +K L+D+Y K G + + +
Sbjct: 11 LSPSLYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKL 70
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
F I +DVV+W A++S F R G +A +F+ M RE V+
Sbjct: 71 FDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVK 111
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+++ ++L Y + ++ F+E+ D+ S S + Y R NF L+ M
Sbjct: 353 VALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEH 412
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMI-KGGTDSEPVVKTALMDMYSKYGLLG 128
+ TF +L ACS E G +++ MI K G ++ + ++DM ++ G L
Sbjct: 413 ERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLE 472
Query: 129 ESVEAFKEIEFKDVV------TWNALLSSFLRHG 156
EA+ I K+ + TW A L + RHG
Sbjct: 473 ---EAYALIRSKEGIVSLSSSTWGAFLDACRRHG 503
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 1/144 (0%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + DL S N+ + YT + +++LF M + +TF +L A +
Sbjct: 172 FDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCL 231
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E ++H L IK G + +L++ Y K G L + + + + +D+++ AL++ F
Sbjct: 232 EIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGF 291
Query: 153 -LRHGLAKEAFGVFQAMTRERVEF 175
++ +AF +F+ M R + +
Sbjct: 292 SQQNNCTSDAFDIFKDMIRMKTKM 315
>sp|Q9SUF9|PP305_ARATH Pentatricopeptide repeat-containing protein At4g08210
OS=Arabidopsis thaliana GN=PCMP-E100 PE=3 SV=1
Length = 686
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H++F + + D+ + + + +S + LF + L+ + + +L CS+L
Sbjct: 397 HKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSL 456
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ GKQ+H L IK G +SEPV TAL+DMY K G + V F + +DVV+W ++
Sbjct: 457 ASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGII 516
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
F ++G +EAF F M +E
Sbjct: 517 VGFGQNGRVEEAFRYFHKMINIGIE 541
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 69/145 (47%), Gaps = 1/145 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAYTFTPVLGACSA 88
H+VFDE+S ++ + + + YT L+ M S + ++ VL AC
Sbjct: 60 HKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL 119
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ + G V+ + K + V+ +++DMY K G L E+ +FKEI +WN L
Sbjct: 120 VGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTL 179
Query: 149 LSSFLRHGLAKEAFGVFQAMTRERV 173
+S + + GL EA +F M + V
Sbjct: 180 ISGYCKAGLMDEAVTLFHRMPQPNV 204
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 3/109 (2%)
Query: 48 LFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGT 107
L S + P M L L + L ACS GKQ+H ++K G
Sbjct: 210 LISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGL 269
Query: 108 DSEPVVKTALMDMYSKYGLLGESVEAFKEIEF---KDVVTWNALLSSFL 153
+S P +AL+DMYS G L + + F + + V WN++LS FL
Sbjct: 270 ESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFL 318
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 45 NSQLFSY-TRSRNFPATWALF-CYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
NS L + N A W L Y C + +YT + L C G QVH+L+
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFD--SYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
+ G + + +V + L+D+++ G + ++ + F + KD++ ++ L+ ++ G AF
Sbjct: 369 VVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAF 428
Query: 163 GVFQAMTR 170
+F+ + +
Sbjct: 429 YLFRELIK 436
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 45/89 (50%)
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C + A +RG+ + A +IK G + ++ MY + LL ++ + F E+ +++VTW
Sbjct: 15 CGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTW 74
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
++S + G +A +++ M E
Sbjct: 75 TTMVSGYTSDGKPNKAIELYRRMLDSEEE 103
>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740,
chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1
Length = 830
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 6/169 (3%)
Query: 13 KTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ C+ +A +L Y +VFDEI + + N+ + Y ++ LF
Sbjct: 205 EDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSD 264
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + T T + L A + + E GKQ HA+ I G + + ++ T+L++ Y K GL
Sbjct: 265 MRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
+ + F + KDVVTWN ++S +++ GL ++A + Q M E++++
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%)
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V AC AL G+ VH ++K G + V ++L DMY K G+L ++ + F EI ++
Sbjct: 179 VCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRN 238
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
V WNAL+ ++++G +EA +F M ++ VE
Sbjct: 239 AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 67/146 (45%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y VFD + D+ + N + Y + + M L T ++ A +
Sbjct: 327 YAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAA 386
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
+ GK+V I+ +S+ V+ + +MDMY+K G + ++ + F KD++ WN
Sbjct: 387 RTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNT 446
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
LL+++ GL+ EA +F M E V
Sbjct: 447 LLAAYAESGLSGEALRLFYGMQLEGV 472
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYG 125
M + L A++ T L AC+ L + G+ +H +I+ S V ++T+L+DMY+K G
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCG 596
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ ++ + F + ++ NA++S++ +G KEA +++++
Sbjct: 597 DINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSL 639
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 3/143 (2%)
Query: 34 DEISHGDLS-SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
DE +H S S ++ S ++ +L M L + + +L C
Sbjct: 27 DEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDL 86
Query: 93 ERGKQVHALMIKGGT--DSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GKQ+HA ++K G ++T L+ Y+K L + F ++ ++V +W A++
Sbjct: 87 STGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIG 146
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
R GL + A F M +
Sbjct: 147 VKCRIGLCEGALMGFVEMLENEI 169
>sp|Q9LRV2|PP256_ARATH Pentatricopeptide repeat-containing protein At3g26540
OS=Arabidopsis thaliana GN=PCMP-A5 PE=2 SV=1
Length = 700
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 1/143 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++FD + ++ S N+ L Y + + M N+ T +L CS +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI-EFKDVVTWNAL 148
+ GKQ H + + G D+ +V AL+DMY K G L + F+++ E +D V+WNAL
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 149 LSSFLRHGLAKEAFGVFQAMTRE 171
L+ R G +++A F+ M E
Sbjct: 469 LTGVARVGRSEQALSFFEGMQVE 491
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 58/100 (58%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+ YT +L C+ +PA GK +H +I+ G + V++ A++DMYSK ++E F
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
KE +D++ WN+++ R+G +KE F +F + E V+
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVK 594
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 2/159 (1%)
Query: 17 SIADALPKRYVYT--HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
SI D K V + +VFDEI + S N + Y +F M +
Sbjct: 202 SIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRP 261
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
+T + V+ ACS A E GK +HA+ +K ++ VV T++ DMY K L + F
Sbjct: 262 LNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVF 321
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ KD+ +W + +S + GL +EA +F M +
Sbjct: 322 DQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 67/139 (48%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++F+E+ D S N+ + + ++ + +F M+ + T +F VL +C +
Sbjct: 116 RELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLI 175
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+Q+H ++K G ++T+++D+Y K ++ ++ F EI V+WN ++
Sbjct: 176 LDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIV 235
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+L G EA +F M
Sbjct: 236 RRYLEMGFNDEAVVMFFKM 254
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 21/146 (14%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
T Q+ + + G++S S LF+ P ++ L+ + +C + A
Sbjct: 33 TRQILEHLEGGNVSKAVSVLFASPE----PVSYWLYERLFRSC-------------SSKA 75
Query: 89 LPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L R Q H + + P+ + ++ Y K G + ++ E F+E+ +D +WNA
Sbjct: 76 LVVQARKVQSHLVTF---SPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNA 132
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
++++ ++G++ E F +F+ M R+ V
Sbjct: 133 VITACAQNGVSDEVFRMFRRMNRDGV 158
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 72/139 (51%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + S N + SY N+ ++ M S + TFT VL ACS L A
Sbjct: 366 VFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAA 425
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E+GKQ+H + + +++ ++ +AL+DMYSK G E+ F I KDVV+W ++S+
Sbjct: 426 LEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISA 485
Query: 152 FLRHGLAKEAFGVFQAMTR 170
+ HG +EA F M +
Sbjct: 486 YGSHGQPREALYQFDEMQK 504
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVFDE+ D++S N+ + + +S LF M S+ + + T + ACS L
Sbjct: 163 QVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLL 222
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
ERGK++H +K G + + V +AL+DMY K L + E F+++ K +V WN+++
Sbjct: 223 WLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIK 282
Query: 151 SFLRHGLAKEAFGVFQAMTRE 171
++ G +K + M E
Sbjct: 283 GYVAKGDSKSCVEILNRMIIE 303
Score = 69.7 bits (169), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 78/147 (53%), Gaps = 2/147 (1%)
Query: 24 KRYVYTHQVFDEIS-HGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTP 81
K + VF+ D+ NS + Y+++ F T +F + + + + ++TF
Sbjct: 53 KDHCSARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPN 112
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
V+ A AL G+ +H L++K G + VV ++L+ MY+K+ L S++ F E+ +D
Sbjct: 113 VIKAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERD 172
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAM 168
V +WN ++S F + G A++A +F M
Sbjct: 173 VASWNTVISCFYQSGEAEKALELFGRM 199
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF ++ L + NS + Y + + + M + T T +L ACS
Sbjct: 264 EVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSR 323
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV-TWNALL 149
GK +H +I+ +++ V +L+D+Y K G + F + + KDV +WN ++
Sbjct: 324 NLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQ-KDVAESWNVMI 382
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
SS++ G +A V+ M
Sbjct: 383 SSYISVGNWFKAVEVYDQMV 402
>sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein At1g03540
OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1
Length = 609
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPVLGA 85
V +VFDE+ D+ + L +++++ + LF MH L TF VL A
Sbjct: 215 VDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTA 274
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
C L ++GK++H +I G S VV+++L+DMY K G + E+ + F + K+ V+W
Sbjct: 275 CGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSW 334
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
+ALL + ++G ++A +F+ M
Sbjct: 335 SALLGGYCQNGEHEKAIEIFREM 357
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 4/144 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
QVF+ +S + S ++ L Y ++ +F M L Y F VL AC+ L
Sbjct: 321 QVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL----YCFGTVLKACAGLA 376
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK++H ++ G +V++AL+D+Y K G + + + ++ ++++TWNA+LS
Sbjct: 377 AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLS 436
Query: 151 SFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G +EA F M ++ ++
Sbjct: 437 ALAQNGRGEEAVSFFNDMVKKGIK 460
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 6/147 (4%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
T +VFD D S S + Y + +F M S L+ +T + + ACS
Sbjct: 116 TRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSE 175
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA---FKEIEFKDVVTW 145
L G+ H ++I G + + + L +Y G+ E V+A F E+ DV+ W
Sbjct: 176 LGEVRLGRCFHGVVITHGFEWNHFISSTLAYLY---GVNREPVDARRVFDEMPEPDVICW 232
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRER 172
A+LS+F ++ L +EA G+F AM R +
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGK 259
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Query: 68 HSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG-L 126
HS+ + T + +L C+ + + G Q HA ++K G +++ V +L+ +Y K G
Sbjct: 53 HSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG 112
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
+ E+ F KD ++W +++S ++ +A VF M
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMV 155
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ DL NS Y + LF + + +TF ++ A L +
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLAS 570
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+ G++ H ++K G + P + AL+DMY+K G ++ +AF +DVV WN+++SS
Sbjct: 571 VQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISS 630
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ HG K+A + + M E +E
Sbjct: 631 YANHGEGKKALQMLEKMMSEGIE 653
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
Y + VL ACS LP E GKQ+HA +++ G + + + L+D Y K G + + + F
Sbjct: 249 GYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFN 308
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+ K++++W LLS + ++ L KEA +F +M++
Sbjct: 309 GMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSK 343
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 11/150 (7%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWAL------FCYMHSTCLNLTAYTFTPVLG 84
+VFD + D+ N+ + Y+R W L F M + + TF +L
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSR---LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLR 462
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
A ++L + KQ+H LM K G + + +AL+D+YS L +S F E++ KD+V
Sbjct: 463 ASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVI 522
Query: 145 WNALLSSFLRHGLAKEAFGVF--QAMTRER 172
WN++ + +++ +EA +F ++RER
Sbjct: 523 WNSMFAGYVQQSENEEALNLFLELQLSRER 552
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R + H++F+ + + ++ S + L Y ++ LF M L Y + +L
Sbjct: 299 RVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILT 358
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+C++L A G QVHA IK ++ V +L+DMY+K L ++ + F DVV
Sbjct: 359 SCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVL 418
Query: 145 WNALLSSFLRHGLA---KEAFGVFQAM 168
+NA++ + R G EA +F+ M
Sbjct: 419 FNAMIEGYSRLGTQWELHEALNIFRDM 445
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 69/152 (45%), Gaps = 7/152 (4%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGA 85
VY +VF+++ +L S ++ + + + + +F T + Y + + A
Sbjct: 96 VYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQA 155
Query: 86 CSALPAPERGK----QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
CS L RG+ Q+ + ++K G D + V T L+D Y K G + + F + K
Sbjct: 156 CSGLDG--RGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKS 213
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
VTW ++S ++ G + + +F + + V
Sbjct: 214 TVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+ FD + D+ NS + SY + M S + TF VL ACS
Sbjct: 610 HKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHA 669
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
E G + LM++ G + E ++ + + G L ++ E +++ K + W +L
Sbjct: 670 GLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSL 729
Query: 149 LSSFLRHG 156
LS + G
Sbjct: 730 LSGCAKAG 737
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 44/75 (58%)
Query: 98 VHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGL 157
VH +I G + + + L+++YS+ G + + + F+++ +++V+W+ ++S+ HG+
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 158 AKEAFGVFQAMTRER 172
+E+ VF R R
Sbjct: 126 YEESLVVFLEFWRTR 140
>sp|Q9LR72|PPR7_ARATH Putative pentatricopeptide repeat-containing protein At1g03510
OS=Arabidopsis thaliana GN=PCMP-E3 PE=3 SV=1
Length = 429
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 67/129 (51%), Gaps = 1/129 (0%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMHST-CLNLTAYTFTPVLGACSALPAPERGKQVH 99
L SL QL SY N LF MHS+ L L A+ F+ L +C+A P G VH
Sbjct: 12 LISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVH 71
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A +K S P V AL+DMY K + + + F EI ++ V WNA++S + G K
Sbjct: 72 AHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVK 131
Query: 160 EAFGVFQAM 168
EA +++AM
Sbjct: 132 EAVELYEAM 140
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 52/96 (54%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T ++ ACSA+ A K++H+ + + P +K+ L++ Y + G + F +
Sbjct: 184 TLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM 243
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
E +DVV W++L+S++ HG A+ A FQ M +V
Sbjct: 244 EDRDVVAWSSLISAYALHGDAESALKTFQEMELAKV 279
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 2/137 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VFDE+ GD NS + + ++ LF M T T VL AC+ L
Sbjct: 216 VFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLAL 275
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
E G Q H ++K D + ++ AL+DMY K G L +++ F +++ +DV+TW+ ++S
Sbjct: 276 LELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISG 333
Query: 152 FLRHGLAKEAFGVFQAM 168
++G ++EA +F+ M
Sbjct: 334 LAQNGYSQEALKLFERM 350
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
HQ+FD++ ++ S + + +Y++ + L M + YT++ VL +C+ +
Sbjct: 116 HQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGM 175
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +H +IK G +S+ V++AL+D+++K G +++ F E+ D + WN+++
Sbjct: 176 SDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSII 232
Query: 150 SSFLRHGLAKEAFGVFQAMTR 170
F ++ + A +F+ M R
Sbjct: 233 GGFAQNSRSDVALELFKRMKR 253
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/137 (19%), Positives = 62/137 (45%)
Query: 37 SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGK 96
S D + L S+ R+ P + S L + T++ ++ C + A G
Sbjct: 22 SSTDQTLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGN 81
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
+ + G + L++MY K+ LL ++ + F ++ ++V++W ++S++ +
Sbjct: 82 LICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCK 141
Query: 157 LAKEAFGVFQAMTRERV 173
+ ++A + M R+ V
Sbjct: 142 IHQKALELLVLMLRDNV 158
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 75/142 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QV+D + D S +S + Y++ + LF M + + ++ + +L A +
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
G QVHA + K G +EP V ++L+ MYSK+G + + +AF +I D++ W AL+
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+S+ +HG A EA V+ M +
Sbjct: 726 ASYAQHGKANEALQVYNLMKEK 747
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 7/154 (4%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLT---AYTFTP 81
R+ ++VF + ++ N+ + R++N+ A + LF H C+ +YT++
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF---HEMCVGFQKPDSYTYSS 256
Query: 82 VLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
VL AC++L GK V A +IK G + + V TA++D+Y+K G + E++E F I
Sbjct: 257 VLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPS 315
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
VV+W +LS + + A A +F+ M VE
Sbjct: 316 VVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI 349
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 29 THQVF---DEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGA 85
+ QVF D+I ++ +N + S+++S+ LF M L ++ +L
Sbjct: 405 SEQVFEDLDDIQRQNI--VNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL-- 460
Query: 86 CSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
S L GKQVH +K G + V ++L +YSK G L ES + F+ I FKD W
Sbjct: 461 -SVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACW 519
Query: 146 NALLSSFLRHGLAKEAFGVFQAM 168
+++S F +G +EA G+F M
Sbjct: 520 ASMISGFNEYGYLREAIGLFSEM 542
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T VL CS+ P+ RGK++H ++ G D + +AL++MYSK G L + + + +
Sbjct: 553 TLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRL 612
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
D V+ ++L+S + +HGL ++ F +F+ M
Sbjct: 613 PELDPVSCSSLISGYSQHGLIQDGFLLFRDMV 644
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FD I D+ S N + Y + R F + F MH ++ V+ ACSAL
Sbjct: 105 KLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQ 164
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
AP + V IK G VV++AL+D++SK ++ + F++ +V WN +++
Sbjct: 165 APLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIA 224
Query: 151 SFLRHGLAKEAFGVFQAM 168
LR+ F +F M
Sbjct: 225 GALRNQNYGAVFDLFHEM 242
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 14 TCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTC 71
C +I D K +VF I + + S L YT+S + + +F M +
Sbjct: 287 VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSG 346
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + T T V+ AC QVHA + K G + V AL+ MYSK G + S
Sbjct: 347 VEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSE 406
Query: 132 EAFK---EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+ F+ +I+ +++V N +++SF + +A +F M +E
Sbjct: 407 QVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE 447
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 29/53 (54%)
Query: 116 ALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+L+ YS G + ++ + F I DVV+ N ++S + +H L +E+ F M
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKM 141
>sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protein At4g38010
OS=Arabidopsis thaliana GN=PCMP-E45 PE=3 SV=1
Length = 559
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 7/159 (4%)
Query: 19 ADALPKRYVYTHQ------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STC 71
+AL YV Q VF E+ D S NS + LF M S+
Sbjct: 242 GNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSG 301
Query: 72 LNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESV 131
+ + T VL AC++L A + G+ VH ++ G + + TA++DMY+K G + ++
Sbjct: 302 IKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETAL 361
Query: 132 EAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
E F I K+V TWNALL HG E+ F+ M +
Sbjct: 362 EIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVK 400
Score = 66.6 bits (161), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA--- 133
+TF PV AC GKQ+H ++ K G + V+ +L+ YG+ GES A
Sbjct: 107 FTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHF---YGVCGESRNACKV 163
Query: 134 FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
F E+ +DVV+W +++ F R GL KEA F M E
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMDVE 201
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 3/138 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF E+ D+ S + +TR+ + F M + T+ VL + +
Sbjct: 162 KVFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVLVSSGRVG 218
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK +H L++K + AL+DMY K L +++ F E+E KD V+WN+++S
Sbjct: 219 CLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMIS 278
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ +KEA +F M
Sbjct: 279 GLVHCERSKEAIDLFSLM 296
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 77/147 (52%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
KR + +VFDE H ++ + L Y+ ++ ++F M + TF L
Sbjct: 274 KRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGL 333
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
+CSAL + GK++H + +K G +++ V +L+ MYS G + ++V F +I K +V
Sbjct: 334 NSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIV 393
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTR 170
+WN+++ +HG K AF +F M R
Sbjct: 394 SWNSIIVGCAQHGRGKWAFVIFGQMIR 420
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 56/111 (50%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M C+ T+ FT V+ AC+ PA G QVH L+IK G E V +L+ Y+
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYA 271
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+G+S + F E + V W ALLS + + ++A +F M R +
Sbjct: 272 NCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI 322
Score = 37.4 bits (85), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 67/150 (44%), Gaps = 16/150 (10%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R V +FDE+ D+ S NS + + LF M + ++T ++
Sbjct: 81 RLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPER----SVVSWTAMVN 136
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTA----LMDMYSKYGLLGESVEAFKEIEFK 140
C ++ +++ M PV TA ++ Y ++G + ++++ FK++ K
Sbjct: 137 GCFRSGKVDQAERLFYQM--------PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGK 188
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTR 170
+V++W ++ ++ + EA +F+ M R
Sbjct: 189 NVISWTTMICGLDQNERSGEALDLFKNMLR 218
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 10/172 (5%)
Query: 3 SFIRMTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA 62
SF F + + L +R +VF+++ +S + YTRS
Sbjct: 28 SFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALN 87
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVK-TALMDMY 121
LF M ++ ++ C E G A+ + VV TA+++
Sbjct: 88 LFDEMPVR----DVVSWNSMISGC-----VECGDMNTAVKLFDEMPERSVVSWTAMVNGC 138
Query: 122 SKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
+ G + ++ F ++ KD WN+++ +L+ G +A +F+ M + V
Sbjct: 139 FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNV 190
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 7/129 (5%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL--TAYTFTPVLGACSAL 89
VF +I + S NS + +++ WA + LN TFT +L ACS
Sbjct: 383 VFIKIFKKSIVSWNSIIVGC--AQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHC 440
Query: 90 PAPERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
E+G+++ M G + ++ T ++D+ + G L E+ E + + K + + W
Sbjct: 441 GFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWL 500
Query: 147 ALLSSFLRH 155
ALLS+ H
Sbjct: 501 ALLSACRMH 509
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 71/124 (57%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
NS + +++++ FP + + + ++ YTF V+ AC+ L E G V+ ++
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G +S+ V AL+DMYS+ GLL + + F E+ +D+V+WN+L+S + HG +EA +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 165 FQAM 168
+ +
Sbjct: 195 YHEL 198
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 6/164 (3%)
Query: 16 ISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+S+++AL Y +V F + GD + N+ + + R +F + M
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRK 502
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE 129
+ + TF L C++L A GK++H +++ G +SE + AL++MYSK G L
Sbjct: 503 SEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLEN 562
Query: 130 SVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
S F+ + +DVVTW ++ ++ +G ++A F M + +
Sbjct: 563 SSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAY-----T 78
+R +VFDE+ D S N+ + Y + + +F NL + T
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE------NLDQFKPDLLT 309
Query: 79 FTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE 138
+ VL AC L K ++ M+K G E V+ L+D+Y+K G + + + F +E
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME 369
Query: 139 FKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KD V+WN+++S +++ G EA +F+ M
Sbjct: 370 CKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+ VF+ + D S NS + Y +S + LF M T+ ++
Sbjct: 359 ITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVS 418
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ L + GK +H+ IK G + V AL+DMY+K G +G+S++ F + D VTWN
Sbjct: 419 TRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWN 478
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRERV 173
++S+ +R G V M + V
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEV 505
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 71/136 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
QVFDE+ DL S NS + Y+ + ++ + ++ + ++T + VL A L
Sbjct: 161 RQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNL 220
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
++G+ +H +K G +S VV L+ MY K+ ++ F E++ +D V++N ++
Sbjct: 221 LVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMI 280
Query: 150 SSFLRHGLAKEAFGVF 165
+L+ + +E+ +F
Sbjct: 281 CGYLKLEMVEESVRMF 296
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 96 KQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIE-FKDVVTWNALLSSFLR 154
+++HAL+I G DS L+D YS + S+ F+ + K+V WN+++ +F +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSK 83
Query: 155 HGLAKEAFGVFQAMTRERV 173
+GL EA + + +V
Sbjct: 84 NGLFPEALEFYGKLRESKV 102
>sp|Q9SJ73|PP148_ARATH Pentatricopeptide repeat-containing protein At2g04860
OS=Arabidopsis thaliana GN=PCMP-E74 PE=2 SV=3
Length = 692
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Query: 22 LPKRYVYTHQ-VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
L K V + Q +FDE+ D N+ + Y+R+ W LF M + +A T
Sbjct: 96 LKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLV 155
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
+L C +G+ VH + K G + + VK AL+ YSK LG + F+E++ K
Sbjct: 156 NLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDK 215
Query: 141 DVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
V+WN ++ ++ + GL +EA VF+ M + VE
Sbjct: 216 STVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSALP 90
+F+++ L S NS + +S + +F M T L A T +L CS L
Sbjct: 404 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 463
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
GK++H ++ ++E V TAL+DMY+K G ++ FK I+ TWN+++S
Sbjct: 464 CLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMIS 523
Query: 151 SFLRHGLAKEAFGVFQAMTRER 172
+ GL A + M RE+
Sbjct: 524 GYSLSGLQHRALSCYLEM-REK 544
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 61/142 (42%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +++ + L S + Y + F C+ + A +L C
Sbjct: 298 VSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGC 357
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ G +H IK G ++ +V L+ MYSK+ + + F++++ +++WN
Sbjct: 358 KKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWN 417
Query: 147 ALLSSFLRHGLAKEAFGVFQAM 168
+++S ++ G A AF VF M
Sbjct: 418 SVISGCVQSGRASTAFEVFHQM 439
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 28 YTHQVFDEISHGDLSSLNSQLF-SYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
Y H + HG++SS +F RS P + + ++ +T + ++
Sbjct: 15 YFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKL------- 67
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWN 146
+ +QV + K G D VKT+L+++Y K G + + F E+ +D V WN
Sbjct: 68 -------QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWN 120
Query: 147 ALLSSFLRHGLAKEAFGVFQAMTRE 171
AL+ + R+G +A+ +F M ++
Sbjct: 121 ALICGYSRNGYECDAWKLFIVMLQQ 145
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 60/148 (40%), Gaps = 8/148 (5%)
Query: 14 TCISIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY--MHS 69
C ++ D K V VF I ++ NS + Y+ S AL CY M
Sbjct: 486 VCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG--LQHRALSCYLEMRE 543
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM-DMYSKYGLLG 128
L TF VL AC+ + GK MIK S + ALM + + L
Sbjct: 544 KGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFT 603
Query: 129 ESVEAFKEIEFK-DVVTWNALLSSFLRH 155
E++ +++ K D W ALLS+ + H
Sbjct: 604 EALYLIWKMDIKPDSAVWGALLSACIIH 631
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
+ F+ +S +L S N+ L R+ NF + L + L ++A+TF +L + +
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ +G+Q+H+ ++K G V AL+ MYSK G + + F +E ++V++W +++
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ F +HG A F M E V+
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVK 572
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 4 FIRMTNFPAKTCI--SIADALPK---RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFP 58
++ +F + C+ S+ D K + ++VFD++S ++ + + + + FP
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTW-TLMITRCMQMGFP 250
Query: 59 -ATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTAL 117
F M + +T + V AC+ L GKQ+H+ I+ G + V+ +L
Sbjct: 251 REAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSL 308
Query: 118 MDMYSKY---GLLGESVEAFKEIEFKDVVTWNALLSSFLRH-GLAKEAFGVFQAM-TRER 172
+DMY+K G + + + F +E V++W AL++ ++++ LA EA +F M T+
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 173 VE 174
VE
Sbjct: 369 VE 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWA--LFCYMHSTC-LNLTAYTFTPVLGACS 87
+VFD + + S + + Y ++ N AT A LF M + + +TF+ AC
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNL-ATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 88 ALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNA 147
L P GKQV K G S V +++ M+ K + ++ AF+ + K++V++N
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNT 444
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERV 173
L R+ ++AF + +T +
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITEREL 470
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 74 LTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA 133
+ + TF+ +L +C GK VHA +I+ + + V+ +L+ +YSK G ++ +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDV 119
Query: 134 FKEIEF---KDVVTWNALLSSFLRHGLAKEAFGVF 165
F+ + +DVV+W+A+++ + +G +A VF
Sbjct: 120 FETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVF 154
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 63/129 (48%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
DL + N+ + YT+S + T LF MH +T V C L A +GKQVH
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A IK G D + V + ++DMY K G + + AF I D V W ++S + +G +
Sbjct: 541 AYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Query: 160 EAFGVFQAM 168
AF VF M
Sbjct: 601 RAFHVFSQM 609
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
+T + A S L A E+G+Q+HA +K ++P V T+L+DMY+K G + ++ FK
Sbjct: 619 FTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKR 678
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
IE ++ WNA+L +HG KE +F+ M
Sbjct: 679 IEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 710
Score = 70.1 bits (170), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 5/145 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRS-----RNFPATWALFCYMHSTCLNLTAYTFTPV 82
Y +VFD++ DL S NS L +Y +S N + LF + + + T +P+
Sbjct: 92 YARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPM 151
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
L C + H K G D + V AL+++Y K+G + E F+E+ ++DV
Sbjct: 152 LKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDV 211
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQA 167
V WN +L ++L G +EA + A
Sbjct: 212 VLWNLMLKAYLEMGFKEEAIDLSSA 236
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+++ + VFD +S DL S NS + ++ LF + L YT T VL
Sbjct: 364 RKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVL 423
Query: 84 GACSALP-APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
A S+LP KQVH IK S+ V TAL+D YS+ + E+ F+ F D+
Sbjct: 424 KAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DL 482
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
V WNA+++ + + + +F M ++
Sbjct: 483 VAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L Y S + A F M + + TF +L + + G+QVH + +K
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
G D V +L++MY K G + F + +D+++WN++++ ++GL EA +
Sbjct: 344 LGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCL 403
Query: 165 FQAMTR 170
F + R
Sbjct: 404 FMQLLR 409
Score = 37.4 bits (85), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 5/84 (5%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
GK HA ++ + E + L+ MYSK G L + F ++ +D+V+WN++L+++ +
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 155 HGLA-----KEAFGVFQAMTRERV 173
++AF +F+ + ++ V
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVV 141
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 78.2 bits (191), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 78/143 (54%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++FDE+SH + + + ++T+S+ F + +LF M ++ + +TF+ V+ +C+ L
Sbjct: 79 KLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLR 138
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
G +VH +IK G + VV ++L D+YSK G E+ E F ++ D ++W ++S
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 151 SFLRHGLAKEAFGVFQAMTRERV 173
S + +EA + M + V
Sbjct: 199 SLVGARKWREALQFYSEMVKAGV 221
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 55 RNFPATWAL--FCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV 112
RN A A+ F M S L +T++ +L CSA+ + + GKQ+H+ IK G +
Sbjct: 302 RNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTD 361
Query: 113 VKTALMDMYSKYGLLGESVEA---FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMT 169
V AL+DMY K VEA F + +VV+W L+ + HG ++ FG+ M
Sbjct: 362 VGNALVDMYMKCS--ASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 170 RERVE 174
+ VE
Sbjct: 420 KREVE 424
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%)
Query: 66 YMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYG 125
YM+ + + + + A + L A E GK +H +K G V +L+DMYSK G
Sbjct: 518 YMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCG 577
Query: 126 LLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
L ++ + F+EI DVV+WN L+S +G A F+ M + E
Sbjct: 578 SLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETE 626
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
++F + + D S + S +R + + M + +TF +LGA S L
Sbjct: 180 ELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL- 238
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GK +H+ +I G V+KT+L+D YS++ + ++V +DV W +++S
Sbjct: 239 GLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVS 298
Query: 151 SFLRHGLAKEAFGVFQAM 168
F+R+ AKEA G F M
Sbjct: 299 GFVRNLRAKEAVGTFLEM 316
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%)
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
T + VL ACS L R ++HA +++ D E VV +L+D Y+ + + + +
Sbjct: 429 TLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSM 488
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ +D +T+ +L++ F G + A V M
Sbjct: 489 KRRDNITYTSLVTRFNELGKHEMALSVINYM 519
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 77.8 bits (190), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 12 AKTCISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWA--- 62
A TCI A+ L Y H +F+ I D+ S NS + Y+++ +++
Sbjct: 45 ASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQ 104
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
LF M + + AYT + A S+L + G+Q HAL++K + + V T+L+ MY
Sbjct: 105 LFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYC 164
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K GL+ + ++ F + ++ TW+ ++S + G +EA VF RE+ E
Sbjct: 165 KAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEE 216
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%)
Query: 33 FDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAP 92
FD + D++ S + Y ++ + L+ M + + T VL ACS+L
Sbjct: 380 FDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATL 439
Query: 93 ERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSF 152
E GKQVH IK G E + +AL MYSK G L + F+ KDVV+WNA++S
Sbjct: 440 ELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGL 499
Query: 153 LRHGLAKEAFGVFQAMTRERVE 174
+G EA +F+ M E +E
Sbjct: 500 SHNGQGDEALELFEEMLAEGME 521
Score = 73.9 bits (180), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 79/140 (56%), Gaps = 4/140 (2%)
Query: 31 QVFDEISHGDLSSL--NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++FD S GD +S+ ++ + Y+++ LF M S + + YT VL ACS
Sbjct: 277 KMFD--SSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNAL 148
+ E GKQ+H+ ++K G + TAL+DMY+K G L ++ + F ++ +DV W +L
Sbjct: 335 ICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSL 394
Query: 149 LSSFLRHGLAKEAFGVFQAM 168
+S ++++ +EA +++ M
Sbjct: 395 ISGYVQNSDNEEALILYRRM 414
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE 136
Y FT VL + +A G+Q+H + IK G + AL+ MYSK L E+ + F
Sbjct: 222 YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDS 281
Query: 137 IEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ +TW+A+++ + ++G + EA +F M
Sbjct: 282 SGDRNSITWSAMVTGYSQNGESLEAVKLFSRM 313
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 95 GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLR 154
G+ VH +I+ G + L++ Y+K G L ++ F I KDVV+WN+L++ + +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 155 HGLAKEAFGVFQAMTRERVE 174
+G ++ V Q R +
Sbjct: 93 NGGISSSYTVMQLFREMRAQ 112
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 4/136 (2%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF + D+ S N+ + + + LF M + + TF ++ ACS
Sbjct: 480 VFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGF 539
Query: 92 PERGKQVHALMIKG-GTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNALL 149
ERG +M G D + ++D+ S+ G L E+ E + + W LL
Sbjct: 540 VERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILL 599
Query: 150 SSFLRHGLAKEAFGVF 165
S+ HG K GV+
Sbjct: 600 SACKNHG--KCELGVY 613
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D + NS + Y + L +M T L ++ + VL A +++ ERG +VH
Sbjct: 583 DNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVH 642
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
A ++ +S+ VV +AL+DMYSK G L ++ F + ++ +WN+++S + RHG +
Sbjct: 643 ACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGE 702
Query: 160 EAFGVFQAM 168
EA +F+ M
Sbjct: 703 EALKLFETM 711
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 3/145 (2%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
V +VFDE+ + S + Y+R+ M + Y F VL AC
Sbjct: 53 VSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC 112
Query: 87 SALPAPER--GKQVHALMIKGGTDSEPVVKTALMDMYSK-YGLLGESVEAFKEIEFKDVV 143
+ + G+Q+H LM K + VV L+ MY K G +G ++ AF +IE K+ V
Sbjct: 113 QEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSV 172
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+WN+++S + + G + AF +F +M
Sbjct: 173 SWNSIISVYSQAGDQRSAFRIFSSM 197
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 10/169 (5%)
Query: 16 ISIADALPKRYVYT------HQVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMH 68
+S+++AL Y T ++F + D S NS + + RS R+ P F
Sbjct: 450 VSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQ 509
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
L TF+ VL A S+L E GKQ+H L +K E + AL+ Y K G +
Sbjct: 510 RAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMD 569
Query: 129 ESVEAFKEI-EFKDVVTWNALLSSFLRHGLAKEAFGV--FQAMTRERVE 174
+ F + E +D VTWN+++S ++ + L +A + F T +R++
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLD 618
Score = 56.6 bits (135), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
+ N AK C SIADA +VF ++ D S NS + ++ F +
Sbjct: 355 LVNMYAK-CGSIADA--------RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKS 405
Query: 67 MHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGL 126
M + ++T L +C++L + G+Q+H +K G D V ALM +Y++ G
Sbjct: 406 MRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGY 465
Query: 127 LGESVEAFKEIEFKDVVTWNALLSSFLR 154
L E + F + D V+WN+++ + R
Sbjct: 466 LNECRKIFSSMPEHDQVSWNSIIGALAR 493
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACS 87
Y +VF+++ + +LN + R + LF M+S ++++ ++ +L +
Sbjct: 261 YARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-IDVSPESYVILLSSFP 319
Query: 88 ALPAPE-----RGKQVHALMIKGG-TDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD 141
E +G++VH +I G D + L++MY+K G + ++ F + KD
Sbjct: 320 EYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 142 VVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
V+WN++++ ++G EA +++M R +
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDI 411
Score = 36.2 bits (82), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 38/75 (50%)
Query: 99 HALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLA 158
H+ + K D + + L++ Y + G + + F E+ ++ V+W ++S + R+G
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 159 KEAFGVFQAMTRERV 173
KEA + M +E +
Sbjct: 84 KEALVFLRDMVKEGI 98
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%)
Query: 45 NSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIK 104
N L +RS AT + + L ++F P+L A S + A G ++H + K
Sbjct: 80 NPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFK 139
Query: 105 GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGV 164
T +P V+T MDMY+ G + + F E+ +DVVTWN ++ + R GL EAF +
Sbjct: 140 IATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKL 199
Query: 165 FQAMTRERV 173
F+ M V
Sbjct: 200 FEEMKDSNV 208
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 75/143 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD+ DL + + +Y S +F M + + + V+ AC+ L
Sbjct: 300 IFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGI 359
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
++ K VH+ + G +SE + AL++MY+K G L + + F+++ ++VV+W++++++
Sbjct: 360 LDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINA 419
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
HG A +A +F M +E VE
Sbjct: 420 LSMHGEASDALSLFARMKQENVE 442
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 31/175 (17%)
Query: 25 RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLG 84
R Y VFDE+SH D+ + N+ + Y R + LF M + + ++
Sbjct: 161 RINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVS 220
Query: 85 ACSALPAPERGKQVHALMIKGGTDSEPVVKTAL---------MDM--------------- 120
AC + ++ +I+ + + TAL MDM
Sbjct: 221 ACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFV 280
Query: 121 -------YSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
YSK G L ++ F + E KD+V W ++S+++ +EA VF+ M
Sbjct: 281 STAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM 335
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 16/153 (10%)
Query: 16 ISIADALPKRYVY------THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS 69
+SI +AL Y T VF+++ ++ S +S + + + +LF M
Sbjct: 379 LSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQ 438
Query: 70 TCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKT-----ALMDMYSKY 124
+ TF VL CS E GK++ A M TD + ++D++ +
Sbjct: 439 ENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM----TDEYNITPKLEHYGCMVDLFGRA 494
Query: 125 GLLGESVEAFKEIEF-KDVVTWNALLSSFLRHG 156
LL E++E + + +VV W +L+S+ HG
Sbjct: 495 NLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 67/132 (50%)
Query: 43 SLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALM 102
S NS + Y LF M + +T+ VL C+ L + GKQ+HA +
Sbjct: 570 SWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQV 629
Query: 103 IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAF 162
IK S+ + + L+DMYSK G L +S F++ +D VTWNA++ + HG +EA
Sbjct: 630 IKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAI 689
Query: 163 GVFQAMTRERVE 174
+F+ M E ++
Sbjct: 690 QLFERMILENIK 701
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD + + S N+ + Y++ + LF + S+ L + + V AC+ +
Sbjct: 338 LFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKG 397
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G Q++ L IK + V A +DMY K L E+ F E+ +D V+WNA++++
Sbjct: 398 LSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAA 457
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
++G E +F +M R R+E
Sbjct: 458 HEQNGKGYETLFLFVSMLRSRIE 480
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%)
Query: 40 DLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVH 99
D+ S NS L Y ++ + +F M + TF +L CS L G Q+H
Sbjct: 144 DVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIH 203
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
++++ G D++ V +AL+DMY+K ES+ F+ I K+ V+W+A+++ +++ L
Sbjct: 204 GIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLS 263
Query: 160 EAFGVFQAMTR 170
A F+ M +
Sbjct: 264 LALKFFKEMQK 274
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFDE+ D S N+ + ++ ++ T LF M + + +TF +L AC+
Sbjct: 438 RVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-G 496
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGE----------------SVEAF 134
+ G ++H+ ++K G S V +L+DMYSK G++ E ++E
Sbjct: 497 SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEEL 556
Query: 135 KEIEFKDV----VTWNALLSSFLRHGLAKEAFGVFQAM 168
+++ K + V+WN+++S ++ +++A +F M
Sbjct: 557 EKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRM 594
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 31/134 (23%)
Query: 73 NLTAYTFTPVLGACSALPAPERGKQVHALMIKGG---------------TDSEPVVKTAL 117
+++ F+ V C+ A E GKQ HA MI G T+S V ++
Sbjct: 45 SVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASM 104
Query: 118 ----------------MDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEA 161
++ YSK + ++ F + +DVV+WN++LS +L++G + ++
Sbjct: 105 VFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKS 164
Query: 162 FGVFQAMTRERVEF 175
VF M RE +EF
Sbjct: 165 IEVFVDMGREGIEF 178
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%)
Query: 21 ALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFT 80
A KR+V + +VF I + S ++ + ++ F M ++ +
Sbjct: 226 AKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYA 285
Query: 81 PVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK 140
VL +C+AL G Q+HA +K ++ +V+TA +DMY+K + ++ F E
Sbjct: 286 SVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENL 345
Query: 141 DVVTWNALLSSF 152
+ ++NA+++ +
Sbjct: 346 NRQSYNAMITGY 357
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 17 SIADALPK--RYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL 74
S+ D K R + +VF + D S NS + Y ++ + LF M + +
Sbjct: 282 SLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKP 341
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A F+ V+ AC+ L GKQ+H +++GG S + +AL+DMYSK G + + + F
Sbjct: 342 GAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIF 401
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+ D V+W A++ HG EA +F+ M R+ V+
Sbjct: 402 DRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVK 441
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 87/166 (52%), Gaps = 5/166 (3%)
Query: 9 NFPAKTCISIADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH 68
+ A+TCI +P +VF+ + D+ S N+ + Y +S + + M
Sbjct: 180 DVKAETCI-----MPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMG 234
Query: 69 STCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLG 128
+T L ++T + VL S +GK++H +I+ G DS+ + ++L+DMY+K +
Sbjct: 235 TTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIE 294
Query: 129 ESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
+S F + +D ++WN+L++ ++++G EA +F+ M +V+
Sbjct: 295 DSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVK 340
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 36/159 (22%)
Query: 46 SQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKG 105
S + +T F A F M ++ F VL +C+ + G+ VH +++
Sbjct: 75 SVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRL 134
Query: 106 GTDSEPVVKTALMDMYSKYGLLG---------------------ESVEA----------- 133
G D + ALM+MY+K +G E V+A
Sbjct: 135 GMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDS 194
Query: 134 ----FKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
F+ + KDVV++N +++ + + G+ ++A + + M
Sbjct: 195 VRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
>sp|Q9M2Y4|PP276_ARATH Pentatricopeptide repeat-containing protein At3g49740
OS=Arabidopsis thaliana GN=PCMP-E84 PE=2 SV=1
Length = 737
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 8/173 (4%)
Query: 7 MTNFPAKTCISIADALPKRYVYTHQV------FDEISHGDLSSLNSQLFS-YTRSRNFPA 59
+ F + I I++AL Y Q+ F+ +L S N+ + Y F
Sbjct: 412 IIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEG 471
Query: 60 TWALFCYMHSTCLNL-TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALM 118
C + S L AYT + +L C + + G Q HA +++ G E ++ AL+
Sbjct: 472 LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI 531
Query: 119 DMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
+MYS+ G + S+E F ++ KDVV+WN+L+S++ RHG + A ++ M E
Sbjct: 532 NMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDE 584
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 63 LFCYMHSTCLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYS 122
+F M L T TF V+G+CS G QVH L IK G + +V A M MYS
Sbjct: 278 VFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIKTGYEKYTLVSNATMTMYS 334
Query: 123 KYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ G + + F+ +E KD+VTWN ++SS+ + L K A V++ M
Sbjct: 335 SFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRM 380
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 70/146 (47%), Gaps = 3/146 (2%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
H+VF+ + DL + N+ + SY +++ + +++ MH + +TF +L L
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
E V A +IK G S+ + AL+ YSK G + ++ F+ K++++WNA++
Sbjct: 403 DVLE---MVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVEF 175
S F +G E F + V
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRI 485
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 41 LSSLNSQLFSYTRSRNFPATWALFCYMHS-TCLNLTAYTFTPVLGACSALPAPERGKQVH 99
L +LN +L TRS LF +H T L Y+ + + L G QVH
Sbjct: 21 LLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVH 80
Query: 100 ALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAK 159
I+ G V L+ +Y + G L + F EI+ DV +W LLS+ + G +
Sbjct: 81 CYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIE 140
Query: 160 EAFGVFQAM 168
AF VF M
Sbjct: 141 YAFEVFDKM 149
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 28 YTHQVFDEI-SHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
Y +VFD++ D++ N+ + S + LF MH + + F +L C
Sbjct: 141 YAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC 200
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKE--IEFKDVVT 144
+ + GKQVH+L+IK G V AL+ MY ++ ++ F+E + +D VT
Sbjct: 201 D-YGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVT 259
Query: 145 WNALLSSFLRHGLA----KEAFGVFQAM 168
+N ++ GLA E+ VF+ M
Sbjct: 260 FNVVID-----GLAGFKRDESLLVFRKM 282
Score = 36.2 bits (82), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSAL 89
+VF+++S D+ S NS + +Y+R + M + A TF+ VL ACS
Sbjct: 545 EVFNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHA 604
Query: 90 PAPERGKQVHALMIK-GGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKD----VVT 144
E G ++ M++ G + L+D+ + G L E+ E+ +I K V
Sbjct: 605 GLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEA-ESLVKISEKTIGSRVDV 663
Query: 145 WNALLSSFLRHG 156
W AL S+ HG
Sbjct: 664 WWALFSACAAHG 675
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+FD+I D+ S S + Y +S + ++LF + +C YTF VL AC+ L
Sbjct: 274 NIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLT 333
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
E GKQVH M + G D ++L+DMY+K G + + D+V+W +L+
Sbjct: 334 TEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIG 393
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
++G EA F + +
Sbjct: 394 GCAQNGQPDEALKYFDLLLK 413
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNL-TAYTFTPVLGACSAL 89
++FDE++ D S + + Y + L+ M + +T + + A +A+
Sbjct: 172 KLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAV 231
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
RGK++H +++ G DS+ V+ ++LMDMY K G + E+ F +I KDVV+W +++
Sbjct: 232 KCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMI 291
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + +E F +F +
Sbjct: 292 DRYFKSSRWREGFSLFSEL 310
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
A T+ ++ CS A E GK+VH + G V+ L+ MY+K G L ++ + F
Sbjct: 85 ASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFD 144
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRE 171
E+ +D+ +WN +++ + GL +EA +F MT +
Sbjct: 145 EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
>sp|O80647|PP195_ARATH Pentatricopeptide repeat-containing protein At2g39620
OS=Arabidopsis thaliana GN=PCMP-E33 PE=3 SV=1
Length = 836
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 71/138 (51%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+F I D+ S ++ + SY ++ +LF M + A T T VL C+ +
Sbjct: 356 QLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVA 415
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
A GK +H IK +SE TA++ MY+K G +++AF+ + KD V +NAL
Sbjct: 416 ASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQ 475
Query: 151 SFLRHGLAKEAFGVFQAM 168
+ + G A +AF V++ M
Sbjct: 476 GYTQIGDANKAFDVYKNM 493
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Query: 19 ADALPKRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM-HSTCLNLTAY 77
A +L +R + +FD + + NS + YTR+ F YM ++ Y
Sbjct: 42 AYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKY 101
Query: 78 TFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEI 137
+FT L AC+ ++G ++H L+ + G +S+ + TAL++MY K L + + F ++
Sbjct: 102 SFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKM 161
Query: 138 EFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
KDVVTWN ++S ++G + A +F M
Sbjct: 162 HVKDVVTWNTMVSGLAQNGCSSAALLLFHDM 192
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 58/100 (58%)
Query: 75 TAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAF 134
A TF ++ A + L A G VH+ +I+ G S+ V +L+DMY+K G++ S + F
Sbjct: 603 NAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCF 662
Query: 135 KEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
EI K +V+WN +LS++ HGLA A +F +M ++
Sbjct: 663 IEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELK 702
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
VF+E+ D SS + + +Y + F LF M + + + L A + +
Sbjct: 256 VFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGD 315
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
+G +H ++ G + V T+LM MYSK G L + + F IE +DVV+W+A+++S
Sbjct: 316 LVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIAS 375
Query: 152 FLRHGLAKEAFGVFQAMTRERVE 174
+ + G EA +F+ M R ++
Sbjct: 376 YEQAGQHDEAISLFRDMMRIHIK 398
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYM--HSTCLNLTAYTFTPVLGACSA 88
+ F+ + D + N+ YT+ + + ++ M H C + + T +L C+
Sbjct: 457 KAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPD--SRTMVGMLQTCAF 514
Query: 89 LPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF-KDVVTWNA 147
RG V+ +IK G DSE V AL++M++K L ++ F + F K V+WN
Sbjct: 515 CSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNI 574
Query: 148 LLSSFLRHGLAKEAFGVFQAMTRERVE 174
+++ +L HG A+EA F+ M E+ +
Sbjct: 575 MMNGYLLHGQAEEAVATFRQMKVEKFQ 601
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVL 83
+ V QVFD++ D+ + N+ + ++ A LF M S C+++ + ++
Sbjct: 149 RDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLI 208
Query: 84 GACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVV 143
A S L + + +H L+IK G + L+DMY L + F+E+ KD
Sbjct: 209 PAVSKLEKSDVCRCLHGLVIKKGFIF--AFSSGLIDMYCNCADLYAAESVFEEVWRKDES 266
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAM 168
+W +++++ +G +E +F M
Sbjct: 267 SWGTMMAAYAHNGFFEEVLELFDLM 291
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
+ + F EIS+ + S N+ L +Y +LF M L + +F VL AC
Sbjct: 658 SEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRH 717
Query: 89 LPAPERGKQVHALM-IKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWN 146
E GK++ M + ++E ++D+ K GL GE+VE + + K V W
Sbjct: 718 AGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWG 777
Query: 147 ALLSSFLRH 155
ALL+S H
Sbjct: 778 ALLNSSRMH 786
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 97 QVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHG 156
QVH +I G +P L++ YS + S F + VV WN+++ + R G
Sbjct: 23 QVHGSLIVSGL--KP--HNQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAG 78
Query: 157 LAKEAFGVFQAMTRER 172
L +EA G F M+ E+
Sbjct: 79 LHREALGFFGYMSEEK 94
>sp|Q1PFQ9|PPR62_ARATH Pentatricopeptide repeat-containing protein At1g28690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E34 PE=2
SV=2
Length = 520
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 79/145 (54%), Gaps = 1/145 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRS-RNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++F+ D+ N+ + ++RS + ++ M + TF V+GACS L
Sbjct: 227 EIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVL 286
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+ E G+QVHA ++K G + + ++L+DMY+K G + ++ F +++ K+V +W +++
Sbjct: 287 TSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMI 346
Query: 150 SSFLRHGLAKEAFGVFQAMTRERVE 174
+ ++G +EA +F M R+E
Sbjct: 347 DGYGKNGNPEEALELFTRMKEFRIE 371
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
PAP+ GK++HA +IK G + + L+ ++ K G L + + F E+ + +N ++
Sbjct: 48 PAPKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMI 107
Query: 150 SSFLRHGLAKEAFGVFQAMT 169
S +L+HGL KE + Q M+
Sbjct: 108 SGYLKHGLVKELLLLVQRMS 127
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC- 86
Y QVFDE+ LS+ N + Y + L M + YT + VL A
Sbjct: 87 YARQVFDELPKPTLSAYNYMISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASN 146
Query: 87 ---SALPAPER-GKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
S + P + VHA +IK + + V+ TAL+D Y K G L + F+ ++ ++V
Sbjct: 147 SRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENV 206
Query: 143 VTWNALLSSFLRHGLAKEAFGVFQ 166
V +++S ++ G ++A +F
Sbjct: 207 VCCTSMISGYMNQGFVEDAEEIFN 230
>sp|Q9C9H9|PP114_ARATH Pentatricopeptide repeat-containing protein At1g71420
OS=Arabidopsis thaliana GN=PCMP-H70 PE=2 SV=1
Length = 745
Score = 76.6 bits (187), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 27 VYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGAC 86
+Y QVFD + ++ S + + Y ++ N + LF M S C +T + VL +C
Sbjct: 113 LYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFP-NEFTLSSVLTSC 171
Query: 87 SALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEA---FKEIEFKDVV 143
P GKQVH L +K G V A++ MY + + EA F+ I+FK++V
Sbjct: 172 RYEP----GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLV 227
Query: 144 TWNALLSSFLRHGLAKEAFGVFQAMTRERVEF 175
TWN+++++F L K+A GVF M + V F
Sbjct: 228 TWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGF 259
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 80/158 (50%), Gaps = 2/158 (1%)
Query: 12 AKTCISIADALPKRYVYTHQVFDEISHG-DLSSLNSQLFSYTRSRNFPATWALFCYMHST 70
A I + + + Y +++F E+SH D+ + N + ++ A LF +
Sbjct: 305 ATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDPERAI-HLFGQLRQE 363
Query: 71 CLNLTAYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGES 130
L+ YTF+ VL AC+ L +HA +IKGG ++ V+ +L+ Y+K G L
Sbjct: 364 KLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLC 423
Query: 131 VEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ F +++ +DVV+WN++L ++ HG VFQ M
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM 461
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VFD++ D+ S NS L +Y+ + +F M +N + TF +L ACS
Sbjct: 425 RVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMD---INPDSATFIALLSACSHAG 481
Query: 91 APERGKQVHALMIKGGTDSEPVVK--TALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNA 147
E G ++ M + ++ P + ++DM S+ E+ E K++ D V W A
Sbjct: 482 RVEEGLRIFRSMFEK-PETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIA 540
Query: 148 LLSSFLRHG 156
LL S +HG
Sbjct: 541 LLGSCRKHG 549
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 22/177 (12%)
Query: 16 ISIADALPKRYVYTHQ---------VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCY 66
I +A+A+ Y H VF+ I +L + NS + ++ +F
Sbjct: 192 IYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMR 251
Query: 67 MHSTCLNLTAYTFTPV---LGACSALPAPERGK---QVHALMIKGGTDSEPVVKTALMDM 120
MHS + T + L S L E K Q+H+L +K G ++ V TAL+ +
Sbjct: 252 MHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKV 311
Query: 121 YSKYGLLGESVEAFKEI----EFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERV 173
YS+ +L + + +K +D+V WN ++++F + + A +F + +E++
Sbjct: 312 YSE--MLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKL 365
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 36/57 (63%)
Query: 112 VVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
++ L++MY+K G + + + F + ++VV+W AL++ +++ G +E F +F +M
Sbjct: 97 ILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM 153
>sp|Q9ZUT4|PP192_ARATH Pentatricopeptide repeat-containing protein At2g37320
OS=Arabidopsis thaliana GN=PCMP-E50 PE=2 SV=1
Length = 500
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 73/139 (52%)
Query: 30 HQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSAL 89
++VF+E+ ++ S + + + + L+ M + + YTFT +L AC+
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
A +G+ VH + G S + +L+ MY K G L ++ F + KDVV+WN+++
Sbjct: 235 GALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMI 294
Query: 150 SSFLRHGLAKEAFGVFQAM 168
+ + +HGLA +A +F+ M
Sbjct: 295 AGYAQHGLAMQAIELFELM 313
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALF-CYMHSTCLNLTAYTFTPVLGACSAL 89
++FD+ S+ D+ S NS + Y + LF M + A T+ VL +C
Sbjct: 277 RIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHA 336
Query: 90 PAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFK-DVVTWNAL 148
+ G++ LM + G E + L+D+ ++GLL E++E + + K + V W +L
Sbjct: 337 GLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSL 396
Query: 149 LSSFLRHG 156
L S HG
Sbjct: 397 LFSCRVHG 404
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 41/77 (53%)
Query: 76 AYTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFK 135
AY + + +C G H L +KGG S+ + ++L+ +Y G + + + F+
Sbjct: 120 AYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFE 179
Query: 136 EIEFKDVVTWNALLSSF 152
E+ ++VV+W A++S F
Sbjct: 180 EMPERNVVSWTAMISGF 196
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 78/155 (50%), Gaps = 11/155 (7%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHS-----------TCLNLTAYTF 79
++F ++ DL + N+ + Y S + L M + L + T
Sbjct: 461 RIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITL 520
Query: 80 TPVLGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEF 139
+L +C+AL A +GK++HA IK ++ V +AL+DMY+K G L S + F +I
Sbjct: 521 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQ 580
Query: 140 KDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
K+V+TWN ++ ++ HG +EA + + M + V+
Sbjct: 581 KNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVK 615
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 29 THQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSA 88
++VFD IS + S NS + S + F M + +++T V+ ACS
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSN 211
Query: 89 LPAPE---RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTW 145
LP PE GKQVHA ++ G + ++ T L+ MY K G L S +D+VTW
Sbjct: 212 LPMPEGLMMGKQVHAYGLRKGELNSFIINT-LVAMYGKLGKLASSKVLLGSFGGRDLVTW 270
Query: 146 NALLSSFLRHGLAKEAFGVFQAMTRERVE 174
N +LSS ++ EA + M E VE
Sbjct: 271 NTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 24 KRYVYTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMH-STCLNLTAYTFTPV 82
K+ + +VFD + + N+ + Y+++ + LF M S L + T V
Sbjct: 352 KQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGV 411
Query: 83 LGACSALPAPERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDV 142
+ AC A R + +H ++K G D + V+ LMDMYS+ G + ++ F ++E +D+
Sbjct: 412 VPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 143 VTWNALLSSFL 153
VTWN +++ ++
Sbjct: 472 VTWNTMITGYV 482
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFK 135
Y F +L A + L E GKQ+HA + K G + V V L+++Y K G G + F
Sbjct: 98 YAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFD 157
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAMTRERVE 174
I ++ V+WN+L+SS + A F+ M E VE
Sbjct: 158 RISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVE 196
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 77 YTFTPVLGACSALPAPERGKQVHALMIKGGT-DSEPVVKTALMDMYSKYGLLGESVEAFK 135
+T + VL ACS L GK++HA +K G+ D V +AL+DMY + F
Sbjct: 303 FTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFD 362
Query: 136 EIEFKDVVTWNALLSSFLRHGLAKEAFGVFQAM 168
+ + + WNA+++ + ++ KEA +F M
Sbjct: 363 GMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGM 395
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 76/142 (53%), Gaps = 1/142 (0%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
+VF+E+ D+ S NS + Y + ++ LF M ++ LGACS +
Sbjct: 186 KVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVY 245
Query: 91 APERGKQVHALMIKGGTDSEPV-VKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALL 149
+P+ GK++H ++ ++ V V T+++DMYSKYG + + F + +++V WN ++
Sbjct: 246 SPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMI 305
Query: 150 SSFLRHGLAKEAFGVFQAMTRE 171
+ R+G +AF FQ M+ +
Sbjct: 306 GCYARNGRVTDAFLCFQKMSEQ 327
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 74/142 (52%)
Query: 32 VFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALPA 91
+FD ++ ++ S NS + +Y ++ + LF + + L + T +L A + +
Sbjct: 387 IFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLS 446
Query: 92 PERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLSS 151
G+++HA ++K S ++ +L+ MY+ G L ++ + F I KDVV+WN+++ +
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 152 FLRHGLAKEAFGVFQAMTRERV 173
+ HG + + +F M RV
Sbjct: 507 YAVHGFGRISVWLFSEMIASRV 528
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 74/140 (52%)
Query: 31 QVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTPVLGACSALP 90
Q+FDE++ D N + +T + + M + +T+ V+ + + +
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 91 APERGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVTWNALLS 150
+ E GK++HA++IK G S+ V +L+ +Y K G ++ + F+E+ +D+V+WN+++S
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 151 SFLRHGLAKEAFGVFQAMTR 170
+L G + +F+ M +
Sbjct: 205 GYLALGDGFSSLMLFKEMLK 224
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 74/144 (51%), Gaps = 9/144 (6%)
Query: 28 YTHQVFDEISHGDLSSLNSQLFSYTRSRNFPATWALFCYMHSTCLNLTAYTFTP-VLGAC 86
Y ++F+ + ++ + N + Y +RN T A C+ + N P V+ +
Sbjct: 285 YAERIFNGMIQRNIVAWNVMIGCY--ARNGRVTDAFLCFQKMSEQN----GLQPDVITSI 338
Query: 87 SALPAPE--RGKQVHALMIKGGTDSEPVVKTALMDMYSKYGLLGESVEAFKEIEFKDVVT 144
+ LPA G+ +H ++ G V++TAL+DMY + G L + F + K+V++
Sbjct: 339 NLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVIS 398
Query: 145 WNALLSSFLRHGLAKEAFGVFQAM 168
WN+++++++++G A +FQ +
Sbjct: 399 WNSIIAAYVQNGKNYSALELFQEL 422
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,740,799
Number of Sequences: 539616
Number of extensions: 2438427
Number of successful extensions: 8662
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 221
Number of HSP's successfully gapped in prelim test: 82
Number of HSP's that attempted gapping in prelim test: 7192
Number of HSP's gapped (non-prelim): 1258
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)