BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045067
(347 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 149/297 (50%), Gaps = 10/297 (3%)
Query: 49 IRSFSAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNN 108
++ FS +EL+ A++N+ +NI+ ++ +G L D T+ VK + + F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 109 IVFASQMS-HNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
V M+ H N+LRL G C+ +LV+ G++ L+ +S PL R +
Sbjct: 85 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PLDWPKRQR 143
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
IA+ A AYLH I+ RD+K++ IL+ E + + +F L+ + + ++ V
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKK 287
+GT G +APEY TG +EK DV+ +G TG+ F++ N D+ +D+VK
Sbjct: 204 RGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI-TGQRAFDLARLANDDDVMLLDWVKG 262
Query: 288 YIENRGFNGIVDPRIIG---DELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
++ + +VD + G DE +E +Q +A C +S +RP M +V + ++
Sbjct: 263 LLKEKKLEALVDVDLQGNYKDEEVEQLIQ----VALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 120 bits (301), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 147/297 (49%), Gaps = 10/297 (3%)
Query: 49 IRSFSAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNN 108
++ FS +EL+ A++N+ +NI+ ++ +G L D + VK + + F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 109 IVFASQMS-HNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
V M+ H N+LRL G C+ +LV+ G++ L+ +S PL R +
Sbjct: 77 EVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQP-PLDWPKRQR 135
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
IA+ A AYLH I+ RD+K++ IL+ E + + +F L+ + + ++ V
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKK 287
+G G +APEY TG +EK DV+ +G TG+ F++ N D+ +D+VK
Sbjct: 196 RGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI-TGQRAFDLARLANDDDVMLLDWVKG 254
Query: 288 YIENRGFNGIVDPRIIG---DELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
++ + +VD + G DE +E +Q +A C +S +RP M +V + ++
Sbjct: 255 LLKEKKLEALVDVDLQGNYKDEEVEQLIQ----VALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 140/298 (46%), Gaps = 31/298 (10%)
Query: 56 ELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQM 115
+LE ATNN+ ++ +I ++ +GVL D +K + I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL---LKHRLKIAMEI 172
H +++ LIG C E +L+++ E GNL KR P + + RL+I +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNL----KRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE-GETYIDDGVKGTS 231
A YLH +R I+ RD+KS IL+ E +VPK+ +F +S E G+T++ VKGT
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 232 GIVAPEYARTGYLNEKCDVYSFG--------XXXXXXXSTGEDLFNMGLRLNGDESFEMD 283
G + PEY G L EK DVYSFG S ++ N+ +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA-----------E 254
Query: 284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
+ + N IVDP + D++ L+ + A +C + S+EDRP+M DV +++
Sbjct: 255 WAVESHNNGQLEQIVDPN-LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 139/298 (46%), Gaps = 31/298 (10%)
Query: 56 ELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQM 115
+LE ATNN+ ++ +I ++ +GVL D +K + I S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL---LKHRLKIAMEI 172
H +++ LIG C E +L+++ E GNL KR P + + RL+I +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNL----KRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE-GETYIDDGVKGTS 231
A YLH +R I+ RD+KS IL+ E +VPK+ +F +S E +T++ VKGT
Sbjct: 149 ARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 232 GIVAPEYARTGYLNEKCDVYSFG--------XXXXXXXSTGEDLFNMGLRLNGDESFEMD 283
G + PEY G L EK DVYSFG S ++ N+ +
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLA-----------E 254
Query: 284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
+ + N IVDP + D++ L+ + A +C + S+EDRP+M DV +++
Sbjct: 255 WAVESHNNGQLEQIVDPN-LADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 50 RSFSAKELERATNNYHYR------NIITESSIFRLCQGVLPDRTISVVKF---IDGSVFD 100
SFS EL+ TNN+ R N + E + +G + + T++V K +D + +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 101 AYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL 160
I ++ H N++ L+G + + LV+ G+L D L S + PL
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPL 130
Query: 161 LLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS-ASIPEG 219
R KIA AN +LH + RD+KS+ IL+ E + K+ +F L+ AS
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 220 ETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+T + + GT+ +APE R G + K D+YSFG
Sbjct: 188 QTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFG 221
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 16/215 (7%)
Query: 50 RSFSAKELERATNNYHYR------NIITESSIFRLCQGVLPDRTISVVKF---IDGSVFD 100
SFS EL+ TNN+ R N + E + +G + + T++V K +D + +
Sbjct: 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 72
Query: 101 AYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL 160
I ++ H N++ L+G + + LV+ G+L D L S + PL
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPL 130
Query: 161 LLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS-ASIPEG 219
R KIA AN +LH + RD+KS+ IL+ E + K+ +F L+ AS
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 187
Query: 220 ETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+T + + GT+ +APE R G + K D+YSFG
Sbjct: 188 QTVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFG 221
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 4/146 (2%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ ++ H N++ +G + +V E G+L+ LL +S E L + RL +
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSM 142
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
A ++A YLH + PIV RDLKS +LV ++Y K+ +F LS +
Sbjct: 143 AYDVAKGMNYLH-NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLS-RLKASXFLXSKXAA 200
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE R NEK DVYSFG
Sbjct: 201 GTPEWMAPEVLRDEPSNEKSDVYSFG 226
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ ++ H N++ +G + +V E G+L+ LL +S E L + RL +
Sbjct: 85 VAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS--GAREQLDERRRLSM 142
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GV 227
A ++A YLH + PIV R+LKS +LV ++Y K+ +F LS + T++
Sbjct: 143 AYDVAKGMNYLH-NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSA 199
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE R NEK DVYSFG
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFG 226
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 50 RSFSAKELERATNNYHYR------NIITESSIFRLCQGVLPDRTISVVKF---IDGSVFD 100
SFS EL+ TNN+ R N + E + +G + + T++V K +D + +
Sbjct: 7 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 66
Query: 101 AYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL 160
I ++ H N++ L+G + + LV+ G+L D L S + PL
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPPL 124
Query: 161 LLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS-ASIPEG 219
R KIA AN +LH + RD+KS+ IL+ E + K+ +F L+ AS
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 181
Query: 220 ETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ + + GT+ +APE R G + K D+YSFG
Sbjct: 182 QXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFG 215
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 35/240 (14%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPL---LLKHRLKI 168
S+++H N+++L G CL PV LV E AE G+L+++L + EPL H +
Sbjct: 57 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHGA-----EPLPYYTAAHAMSW 108
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKS-SYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
++ + AYLH + ++ RDLK + +LV+ V K+ +F + I +T++ +
Sbjct: 109 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN- 164
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKK 287
KG++ +APE +EKCDV+S+G + + + G +F + +
Sbjct: 165 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI-----GGPAFRIMWAVH 219
Query: 288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF 347
NG P I + L ++S L +C S RP+M ++ K + + + F
Sbjct: 220 -------NGTRPPLI---KNLPKPIES---LMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 266
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 35/240 (14%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPL---LLKHRLKI 168
S+++H N+++L G CL PV LV E AE G+L+++L + EPL H +
Sbjct: 56 SRVNHPNIVKLYGACLN---PVCLVMEYAEGGSLYNVLHGA-----EPLPYYTAAHAMSW 107
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKS-SYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
++ + AYLH + ++ RDLK + +LV+ V K+ +F + I +T++ +
Sbjct: 108 CLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN- 163
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKK 287
KG++ +APE +EKCDV+S+G + + + G +F + +
Sbjct: 164 KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI-----GGPAFRIMWAVH 218
Query: 288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF 347
NG P I + L ++S L +C S RP+M ++ K + + + F
Sbjct: 219 -------NGTRPPLI---KNLPKPIES---LMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 50 RSFSAKELERATNNYHYR------NIITESSIFRLCQGVLPDRTISVVKF---IDGSVFD 100
SFS EL+ TNN+ R N E + +G + + T++V K +D + +
Sbjct: 4 HSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE 63
Query: 101 AYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL 160
I ++ H N++ L+G + + LV+ G+L D L S + PL
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPPL 121
Query: 161 LLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS-ASIPEG 219
R KIA AN +LH + RD+KS+ IL+ E + K+ +F L+ AS
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFA 178
Query: 220 ETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ + GT+ APE R G + K D+YSFG
Sbjct: 179 QXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFG 212
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++SH +++L G CLE LVFE E+G L D L+ + LL + +++
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 111
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AYL ++ RDL + LV E V K+ +F ++ + + + G K
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 168
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
+PE + K DV+SFG S G K ENR
Sbjct: 169 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG---------------------KIPYENRS 207
Query: 294 FNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTMIDVAKQIKKMYKS 346
+ +V+ G L + +L S+ +++ C EDRP + +Q+ ++ +S
Sbjct: 208 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++SH +++L G CLE LVFE E+G L D L+ + LL + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 113
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AYL ++ RDL + LV E V K+ +F ++ + + + G K
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 170
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
+PE + K DV+SFG S G K ENR
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG---------------------KIPYENRS 209
Query: 294 FNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTMIDVAKQIKKMYKS 346
+ +V+ G L + +L S+ +++ C EDRP + +Q+ ++ +S
Sbjct: 210 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++SH +++L G CLE LVFE E+G L D L+ + LL + +++
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 116
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AYL ++ RDL + LV E V K+ +F ++ + + + G K
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 173
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
+PE + K DV+SFG S G K ENR
Sbjct: 174 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG---------------------KIPYENRS 212
Query: 294 FNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTMIDVAKQIKKMYKS 346
+ +V+ G L + +L S+ +++ C EDRP + +Q+ ++ +S
Sbjct: 213 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 30/235 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++SH +++L G CLE LVFE E+G L D L+ + LL + +++
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 133
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AYL ++ RDL + LV E V K+ +F ++ + + + G K
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 190
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
+PE + K DV+SFG S G K ENR
Sbjct: 191 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG---------------------KIPYENRS 229
Query: 294 FNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTMIDVAKQIKKMYKS 346
+ +V+ G L + +L S+ +++ C EDRP + +Q+ ++ +S
Sbjct: 230 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 30/235 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++SH +++L G CLE LVFE E+G L D L+ + LL + +++
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 113
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AYL ++ RDL + LV E V K+ +F ++ + + + G K
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 170
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
+PE + K DV+SFG S G K ENR
Sbjct: 171 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG---------------------KIPYENRS 209
Query: 294 FNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTMIDVAKQIKKMYKS 346
+ +V+ G L + +L S+ +++ C EDRP + +Q+ + S
Sbjct: 210 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 130
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 131 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 187
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 188 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 239
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 240 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 288
Query: 346 SF 347
+F
Sbjct: 289 TF 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 102 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 157
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 158 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 214
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 215 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 266
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 267 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 315
Query: 346 SF 347
+F
Sbjct: 316 TF 317
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 138
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 139 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 247
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 248 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
Query: 346 SF 347
+F
Sbjct: 297 TF 298
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 101 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 156
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 157 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 213
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 214 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 265
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 266 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 314
Query: 346 SF 347
+F
Sbjct: 315 TF 316
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 133
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 134 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 190
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 242
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 243 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 291
Query: 346 SF 347
+F
Sbjct: 292 TF 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 138
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 139 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 195
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 247
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 248 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
Query: 346 SF 347
+F
Sbjct: 297 TF 298
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 135
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 136 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 192
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 244
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 245 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 293
Query: 346 SF 347
+F
Sbjct: 294 TF 295
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 137
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 138 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 194
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 246
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 247 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
Query: 346 SF 347
+F
Sbjct: 296 TF 297
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 136
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI---DD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E Y
Sbjct: 137 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKT 193
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 245
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 246 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
Query: 346 SF 347
+F
Sbjct: 295 TF 296
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 86 RTISV-VKFIDGSVF---DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE 141
+T+SV VK + V +A D + + H N++RL G L + +V E A
Sbjct: 39 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 97
Query: 142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE 201
G+L D L R +Q H LL + A+++A YL S+ + RDL + +L++
Sbjct: 98 LGSLLDRL-RKHQGH---FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLAT 150
Query: 202 RYVPKLFNFSLSASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXX 259
R + K+ +F L ++P+ + + + + K APE +T + D + FG
Sbjct: 151 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 210
Query: 260 XXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELA 319
+ G++ + + LNG + + I+ G PR E Q + +
Sbjct: 211 MFTYGQEPW---IGLNGSQ------ILHKIDKEGERL---PRP------EDCPQDIYNVM 252
Query: 320 FQCQSASAEDRPTMI 334
QC + EDRPT +
Sbjct: 253 VQCWAHKPEDRPTFV 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 86 RTISV-VKFIDGSVF---DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE 141
+T+SV VK + V +A D + + H N++RL G L + +V E A
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 93
Query: 142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE 201
G+L D L R +Q H LL + A+++A YL S+ + RDL + +L++
Sbjct: 94 LGSLLDRL-RKHQGH---FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLAT 146
Query: 202 RYVPKLFNFSLSASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXX 259
R + K+ +F L ++P+ + + + + K APE +T + D + FG
Sbjct: 147 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
Query: 260 XXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELA 319
+ G++ + + LNG + + I+ G PR E Q + +
Sbjct: 207 MFTYGQEPW---IGLNGSQ------ILHKIDKEGERL---PRP------EDCPQDIYNVM 248
Query: 320 FQCQSASAEDRPTMI 334
QC + EDRPT +
Sbjct: 249 VQCWAHKPEDRPTFV 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 86 RTISV-VKFIDGSVF---DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE 141
+T+SV VK + V +A D + + H N++RL G L + +V E A
Sbjct: 39 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 97
Query: 142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE 201
G+L D L R +Q H LL + A+++A YL S+ + RDL + +L++
Sbjct: 98 LGSLLDRL-RKHQGH---FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLAT 150
Query: 202 RYVPKLFNFSLSASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXX 259
R + K+ +F L ++P+ + + + + K APE +T + D + FG
Sbjct: 151 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 210
Query: 260 XXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELA 319
+ G++ + + LNG + + I+ G PR E Q + +
Sbjct: 211 MFTYGQEPW---IGLNGSQ------ILHKIDKEGERL---PRP------EDCPQDIYNVM 252
Query: 320 FQCQSASAEDRPTMI 334
QC + EDRPT +
Sbjct: 253 VQCWAHKPEDRPTFV 267
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 86 RTISV-VKFIDGSVF---DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE 141
+T+SV VK + V +A D + + H N++RL G L + +V E A
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 93
Query: 142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE 201
G+L D L R +Q H LL + A+++A YL S+ + RDL + +L++
Sbjct: 94 LGSLLDRL-RKHQGH---FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLAT 146
Query: 202 RYVPKLFNFSLSASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXX 259
R + K+ +F L ++P+ + + + + K APE +T + D + FG
Sbjct: 147 RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
Query: 260 XXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELA 319
+ G++ + + LNG + + I+ G PR E Q + +
Sbjct: 207 MFTYGQEPW---IGLNGSQ------ILHKIDKEGERL---PRP------EDCPQDIYNVM 248
Query: 320 FQCQSASAEDRPTMI 334
QC + EDRPT +
Sbjct: 249 VQCWAHKPEDRPTFV 263
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 86 RTISV-VKFIDGSVF---DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE 141
+T+SV VK + V +A D + + H N++RL G L + +V E A
Sbjct: 35 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 93
Query: 142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE 201
G+L D L R +Q H LL + A+++A YL S+ + RDL + +L++
Sbjct: 94 LGSLLDRL-RKHQGH---FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLAT 146
Query: 202 RYVPKLFNFSLSASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXX 259
R + K+ +F L ++P+ + + + + K APE +T + D + FG
Sbjct: 147 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206
Query: 260 XXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELA 319
+ G++ + + LNG + + I+ G PR E Q + +
Sbjct: 207 MFTYGQEPW---IGLNGSQ------ILHKIDKEGERL---PRP------EDCPQDIYNVM 248
Query: 320 FQCQSASAEDRPTMI 334
QC + EDRPT +
Sbjct: 249 VQCWAHKPEDRPTFV 263
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 86 RTISV-VKFIDGSVF---DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE 141
+T+SV VK + V +A D + + H N++RL G L + +V E A
Sbjct: 45 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 103
Query: 142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE 201
G+L D L R +Q H LL + A+++A YL S+ + RDL + +L++
Sbjct: 104 LGSLLDRL-RKHQGH---FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLAT 156
Query: 202 RYVPKLFNFSLSASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXX 259
R + K+ +F L ++P+ + + + + K APE +T + D + FG
Sbjct: 157 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 216
Query: 260 XXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELA 319
+ G++ + + LNG + + I+ G PR E Q + +
Sbjct: 217 MFTYGQEPW---IGLNGSQ------ILHKIDKEGERL---PRP------EDCPQDIYNVM 258
Query: 320 FQCQSASAEDRPTMI 334
QC + EDRPT +
Sbjct: 259 VQCWAHKPEDRPTFV 273
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 86 RTISV-VKFIDGSVF---DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE 141
+T+SV VK + V +A D + + H N++RL G L + +V E A
Sbjct: 45 KTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK-MVTELAP 103
Query: 142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE 201
G+L D L R +Q H LL + A+++A YL S+ + RDL + +L++
Sbjct: 104 LGSLLDRL-RKHQGH---FLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLAT 156
Query: 202 RYVPKLFNFSLSASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXX 259
R + K+ +F L ++P+ + + + + K APE +T + D + FG
Sbjct: 157 RDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 216
Query: 260 XXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELA 319
+ G++ + + LNG + + I+ G PR E Q + +
Sbjct: 217 MFTYGQEPW---IGLNGSQ------ILHKIDKEGERL---PRP------EDCPQDIYNVM 258
Query: 320 FQCQSASAEDRPTMI 334
QC + EDRPT +
Sbjct: 259 VQCWAHKPEDRPTFV 273
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 137
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A YL S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 138 GLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKT 194
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 246
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 247 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 295
Query: 346 SF 347
+F
Sbjct: 296 TF 297
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 97/235 (41%), Gaps = 30/235 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++SH +++L G CLE LV E E+G L D L+ + LL + +++
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG----MCLDVC 114
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AYL ++ RDL + LV E V K+ +F ++ + + + G K
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKW 171
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
+PE + K DV+SFG S G K ENR
Sbjct: 172 ASPEVFSFSRYSSKSDVWSFGVLMWEVFSEG---------------------KIPYENRS 210
Query: 294 FNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTMIDVAKQIKKMYKS 346
+ +V+ G L + +L S+ +++ C EDRP + +Q+ ++ +S
Sbjct: 211 NSEVVEDISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 139
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A +L S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 140 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKT 196
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 248
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 249 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
Query: 346 SF 347
+F
Sbjct: 298 TF 299
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 136
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A +L S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 137 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 193
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 245
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 246 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 294
Query: 346 SF 347
+F
Sbjct: 295 TF 296
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 88 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 143
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A +L S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 144 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 200
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 201 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 252
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 253 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 301
Query: 346 SF 347
+F
Sbjct: 302 TF 303
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 139
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A +L S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 140 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 196
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 197 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 248
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 249 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 297
Query: 346 SF 347
+F
Sbjct: 298 TF 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 138
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A +L S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 139 GLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 247
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 248 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
Query: 346 SF 347
+F
Sbjct: 297 TF 298
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 138
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A +L S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 139 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 195
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 247
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 248 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 296
Query: 346 SF 347
+F
Sbjct: 297 TF 298
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 104/242 (42%), Gaps = 30/242 (12%)
Query: 110 VFASQMSHNNVLRLIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ SH NVL L+G CL E P++V ++G+L + ++ ++H+ +K +
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN--ETHNP--TVKDLIGF 197
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD 225
+++A +L S+ V RDL + ++ E++ K+ +F L+ + + E +
Sbjct: 198 GLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKT 254
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
G K +A E +T K DV+SFG + G + + D
Sbjct: 255 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY--------PDVNTFDIT 306
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
++ R ++ P D L +E+ +C AE RP+ ++ +I ++
Sbjct: 307 VYLLQGR---RLLQPEYCPDPL--------YEVMLKCWHPKAEMRPSFSELVSRISAIFS 355
Query: 346 SF 347
+F
Sbjct: 356 TF 357
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 NLHDLLKRSYQSHSEP--------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSS 195
NL L RS ++ P L L+H + + ++A +L SR + RDL +
Sbjct: 118 NLSTYL-RSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLA---SRKXIHRDLAAR 173
Query: 196 YILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
IL+SE+ V K+ +F L+ I + Y+ G + +APE + DV+SFG
Sbjct: 174 NILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 255 XXXXXXXSTGEDLFNMGLRLNGDESF 280
S G + G+++ DE F
Sbjct: 234 VLLWEIFSLGASPYP-GVKI--DEEF 256
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 77 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 135
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V RDL + +V+ + K+ +F ++ I E D KG
Sbjct: 136 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRKGGK 188
Query: 232 GIV-----APEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
G++ APE + G D++SFG S E +
Sbjct: 189 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 231
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 79 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 137
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V RDL + +V+ + K+ +F ++ I E + Y G KG
Sbjct: 138 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 193
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
+ +APE + G D++SFG S E +
Sbjct: 194 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 233
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V RDL + +V+ + K+ +F ++ I E D KG
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRKGGK 191
Query: 232 GIV-----APEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
G++ APE + G D++SFG S E +
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 119
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW 176
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 224
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 225 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 256
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V RDL + +V+ + K+ +F ++ I E + Y G KG
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 194
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
+ +APE + G D++SFG S E +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 19/163 (11%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V RDL + +V+ + K+ +F ++ I E D KG
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE----TDXXRKGGK 191
Query: 232 GIV-----APEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
G++ APE + G D++SFG S E +
Sbjct: 192 GLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 65 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 120
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 177
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 225
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 226 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 257
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 99/233 (42%), Gaps = 29/233 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
++ H N+++L+G C +E P +V E YGNL D L+ + ++L L +A +I
Sbjct: 84 EIKHPNLVQLLGVCT-LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVL---LYMATQI 139
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTS 231
++ YL + + RDL + LV E +V K+ +F LS + G+TY G K
Sbjct: 140 SSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKFPI 195
Query: 232 GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN 291
APE + K DV++FG + G M D S D ++K
Sbjct: 196 KWTAPESLAYNTFSIKSDVWAFGVLLWEIATYG-----MSPYPGIDLSQVYDLLEKGYRM 250
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMY 344
G P++ +EL C S DRP+ + + + M+
Sbjct: 251 EQPEG-CPPKV-------------YELMRACWKWSPADRPSFAETHQAFETMF 289
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 119
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 224
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 225 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 256
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 66 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 178
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 226
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 227 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 258
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 73 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 128
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 185
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 233
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 234 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 32/247 (12%)
Query: 88 ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
++V GS+ + D Q+ H ++RL + I ++ E E G+L D
Sbjct: 46 VAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 102
Query: 148 LLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL 207
LK L + L +A +IA A++ R + RDL+++ ILVS+ K+
Sbjct: 103 FLK---TPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKI 156
Query: 208 FNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDL 267
+F L+ I + E +G K APE G K DV+SFG + G
Sbjct: 157 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-- 214
Query: 268 FNMGLRLNGDESFEMDFVKKYIEN--RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSA 325
+ G + E+ I+N RG+ +V P +EL ++L C
Sbjct: 215 ----IPYPGMTNPEV------IQNLERGYR-MVRPDNCPEEL--------YQLMRLCWKE 255
Query: 326 SAEDRPT 332
EDRPT
Sbjct: 256 RPEDRPT 262
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 13/160 (8%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V RDL + +V+ + K+ +F ++ I E Y G KG
Sbjct: 139 IADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TAYYRKGGKGLL 194
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
+ +APE + G D++SFG S E +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 119
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW 176
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 224
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 225 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 256
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 32/247 (12%)
Query: 88 ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
++V GS+ + D Q+ H ++RL + I ++ E E G+L D
Sbjct: 48 VAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 104
Query: 148 LLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL 207
LK L + L +A +IA A++ R + RDL+++ ILVS+ K+
Sbjct: 105 FLK---TPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKI 158
Query: 208 FNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDL 267
+F L+ I + E +G K APE G K DV+SFG + G
Sbjct: 159 ADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-- 216
Query: 268 FNMGLRLNGDESFEMDFVKKYIEN--RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSA 325
+ G + E+ I+N RG+ +V P +EL ++L C
Sbjct: 217 ----IPYPGMTNPEV------IQNLERGYR-MVRPDNCPEEL--------YQLMRLCWKE 257
Query: 326 SAEDRPT 332
EDRPT
Sbjct: 258 RPEDRPT 264
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 96/206 (46%), Gaps = 18/206 (8%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 NLHDLLKRSYQSHSEP--------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSS 195
NL L RS ++ P L L+H + + ++A +L SR + RDL +
Sbjct: 118 NLSTYL-RSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKXIHRDLAAR 173
Query: 196 YILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
IL+SE+ V K+ +F L+ I + Y+ G + +APE + DV+SFG
Sbjct: 174 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG 233
Query: 255 XXXXXXXSTGEDLFNMGLRLNGDESF 280
S G + G+++ DE F
Sbjct: 234 VLLWEIFSLGASPYP-GVKI--DEEF 256
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 59 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 114
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 171
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 219
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 220 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 251
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 70 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 125
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 182
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 230
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 231 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 262
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 69 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 229
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 230 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 261
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q SH N++RLIG C + + +V E + G+ L+ + L +K L++ + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGARLRVKTLLQMVGDAA 223
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS-G 232
YL S+ + RDL + LV+E+ V K+ +F +S +G G++
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK 280
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE G + + DV+SFG S G + + ++++E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY---------PNLSNQQTREFVEKG 331
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
G R+ EL + F L QC + RP+ + ++++ + K
Sbjct: 332 G-------RLPCPELCP---DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 119
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + RDL+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 176
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 224
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 225 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 256
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 90/220 (40%), Gaps = 29/220 (13%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN 174
+ H+ ++RL E ++ E G+L D LK +LL + + +IA
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLK---SDEGGKVLLPKLIDFSAQIAE 121
Query: 175 VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV 234
AY+ + + RDL+++ +LVSE + K+ +F L+ I + E +G K
Sbjct: 122 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 178
Query: 235 APEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF 294
APE G K DV+SFG + G+ + R N D +
Sbjct: 179 APEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPG--RTNADVMTALS----------- 225
Query: 295 NGIVDPRI--IGDELLEHKLQSSFELAFQCQSASAEDRPT 332
G PR+ DEL +++ C AE+RPT
Sbjct: 226 QGYRMPRVENCPDEL--------YDIMKMCWKEKAEERPT 257
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 102/247 (41%), Gaps = 32/247 (12%)
Query: 88 ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
++V GS+ + D Q+ H ++RL + I ++ E E G+L D
Sbjct: 50 VAVKSLKQGSM--SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVD 106
Query: 148 LLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL 207
LK L + L +A +IA A++ R + RDL+++ ILVS+ K+
Sbjct: 107 FLK---TPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKI 160
Query: 208 FNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDL 267
+F L+ I + E +G K APE G K DV+SFG + G
Sbjct: 161 ADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR-- 218
Query: 268 FNMGLRLNGDESFEMDFVKKYIEN--RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSA 325
+ G + E+ I+N RG+ +V P +EL ++L C
Sbjct: 219 ----IPYPGMTNPEV------IQNLERGYR-MVRPDNCPEEL--------YQLMRLCWKE 259
Query: 326 SAEDRPT 332
EDRPT
Sbjct: 260 RPEDRPT 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q SH N++RLIG C + + +V E + G+ L+ + L +K L++ + A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR----TEGARLRVKTLLQMVGDAA 223
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS-G 232
YL S+ + RDL + LV+E+ V K+ +F +S +G G++
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVK 280
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE G + + DV+SFG S G + + ++++E
Sbjct: 281 WTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY---------PNLSNQQTREFVEKG 331
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
G R+ EL + F L QC + RP+ + ++++ + K
Sbjct: 332 G-------RLPCPELCP---DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 232
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 233 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 227
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 228 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 227
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 228 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 105/242 (43%), Gaps = 35/242 (14%)
Query: 116 SHNNVLRLIGCCLE-----VEIPVLVFESAEYGNLHD-LLKRSYQSHSEPLLLKHRLKIA 169
SH NV+RL+G C+E + P+++ +YG+LH LL ++ + + L+ LK
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM 153
Query: 170 MEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV-K 228
++IA YL +R + RDL + ++ + + +F LS I G+ Y + K
Sbjct: 154 VDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAK 210
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEM-DFVKK 287
+A E K DV++FG + G + G ++ EM D++
Sbjct: 211 MPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPY------PGVQNHEMYDYL-- 262
Query: 288 YIENRGFNG--IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
+G + P DEL +E+ + C DRPT + Q++K+ +
Sbjct: 263 ------LHGHRLKQPEDCLDEL--------YEIMYSCWRTDPLDRPTFSVLRLQLEKLLE 308
Query: 346 SF 347
S
Sbjct: 309 SL 310
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 128/304 (42%), Gaps = 31/304 (10%)
Query: 44 GNYNPIRSFSAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISV-VKFIDGSVFDAY 102
G +P ++ E+ER + ++ + + +GV +++V VK + +
Sbjct: 1 GAMDPSPNYDKWEMER--TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE 58
Query: 103 DCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLL 162
+ V ++ H N+++L+G C ++ E YGNL D L+ + ++L
Sbjct: 59 EFLKEAAVM-KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 117
Query: 163 KHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY 222
L +A +I++ YL + + RDL + LV E ++ K+ +F LS + G+TY
Sbjct: 118 ---LYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTY 170
Query: 223 IDD-GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE 281
G K APE + K DV++FG + G ++ +
Sbjct: 171 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGID 221
Query: 282 MDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
+ V + +E D R+ E K+ +EL C + DRP+ ++ + +
Sbjct: 222 LSQVYELLEK-------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFE 271
Query: 342 KMYK 345
M++
Sbjct: 272 TMFQ 275
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 123/314 (39%), Gaps = 51/314 (16%)
Query: 58 ERATNNYHYRNIITESSIFRLCQ----GVLPDR--TISVVKFIDGSVFDAYDCCFN-NIV 110
E NN Y I E + R+ Q G+LP T+ VK + F
Sbjct: 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAA 102
Query: 111 FASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHS------------- 157
++ + N+++L+G C + L+FE YG+L++ L RS H+
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFL-RSMSPHTVCSLSHSDLSTRA 161
Query: 158 -------EPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF 210
PL +L IA ++A AYL R V RDL + LV E V K+ +F
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLATRNCLVGENMVVKIADF 218
Query: 211 SLSASIPEGETYIDDGVKGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
LS +I + Y DG + PE + DV+++G ++F+
Sbjct: 219 GLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW-------EIFS 271
Query: 270 MGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAED 329
GL+ + E V Y+ R N + P EL + L C S D
Sbjct: 272 YGLQPYYGMAHEE--VIYYV--RDGNILACPENCPLEL--------YNLMRLCWSKLPAD 319
Query: 330 RPTMIDVAKQIKKM 343
RP+ + + +++M
Sbjct: 320 RPSFCSIHRILQRM 333
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 109 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 164
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + Y+ G + +APE + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 225 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 251
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 20/209 (9%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 144 NLHDLLKR------SYQSHSEPL-----LLKHRLKIAMEIANVFAYLHIGFSRPIVFRDL 192
NL L+ Y+ E L L+H + + ++A +L SR + RDL
Sbjct: 120 NLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDL 176
Query: 193 KSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVY 251
+ IL+SE+ V K+ +F L+ I + Y+ G + +APE + DV+
Sbjct: 177 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVW 236
Query: 252 SFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
SFG S G + G+++ DE F
Sbjct: 237 SFGVLLWEIFSLGASPYP-GVKI--DEEF 262
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 109 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 164
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + Y+ G + +APE + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 225 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 251
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 227
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 228 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 155 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 210
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + Y+ G + +APE + DV
Sbjct: 211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 270
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 271 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 297
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 81 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 139
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V R+L + +V+ + K+ +F ++ I E + Y G KG
Sbjct: 140 IADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 195
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
+ +APE + G D++SFG S E +
Sbjct: 196 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 235
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 232
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 233 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 96/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 118 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + Y+ G + +APE + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 234 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 260
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 13/160 (8%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + ++V E +G+L L RS + +E P L+ +++A E
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYL-RSLRPEAENNPGRPPPTLQEMIQMAAE 138
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ ++ V R+L + +V+ + K+ +F ++ I E + Y G KG
Sbjct: 139 IADGMAYLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 194
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFN 269
+ +APE + G D++SFG S E +
Sbjct: 195 PVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQ 234
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 227
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 228 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 78 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 134
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 135 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 190
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 191 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 240
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 241 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 284
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 59 KLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 114
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 115 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW 171
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 172 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 202
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 126
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 232
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 233 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 144 NLHDLLKRSYQSHSEP----------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLK 193
NL L RS ++ P L L+H + + ++A +L SR + RDL
Sbjct: 120 NLSTYL-RSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLA---SRKXIHRDLA 175
Query: 194 SSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYS 252
+ IL+SE+ V K+ +F L+ I + + G + +APE + DV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 253 FGXXXXXXXSTGEDLFNMGLRLNGDESF 280
FG S G + G+++ DE F
Sbjct: 236 FGVLLWEIFSLGASPYP-GVKI--DEEF 260
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 182
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 183 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 232
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 233 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 123
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 229
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 230 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 122
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 178
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 179 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 228
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 229 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 227
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 228 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 271
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 27/232 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 227
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMY 344
D R+ E K+ +EL C + DRP+ ++ + + M+
Sbjct: 228 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMF 270
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 123
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK 179
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 229
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 230 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 67 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 123
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+TY G K
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 179
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 180 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK- 229
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 230 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 273
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 119
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ YL + + RDL + LV E ++ K+ +F LS + G K
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
APE + K DV++FG + G M D S + ++K
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYG-----MSPYPGIDPSQVYELLEK------ 225
Query: 294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 226 -----DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 30/221 (13%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q+ H ++RL + I ++ E E G+L D LK L + L +A +IA
Sbjct: 60 QLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFLK---TPSGIKLTINKLLDMAAQIA 115
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
A++ R + R+L+++ ILVS+ K+ +F L+ I + E +G K
Sbjct: 116 EGMAFIE---ERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKW 172
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-- 291
APE G K DV+SFG + G + G + E+ I+N
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGILLTEIVTHGR------IPYPGMTNPEV------IQNLE 220
Query: 292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
RG+ +V P +EL ++L C EDRPT
Sbjct: 221 RGYR-MVRPDNCPEEL--------YQLMRLCWKERPEDRPT 252
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 60 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 115
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 116 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 172
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 203
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 58 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 113
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 114 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 170
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 171 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 201
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 290
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 290
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 110 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 168
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 169 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 224
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 225 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 277
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 278 -----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 318
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 69 KIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 62 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 117
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 118 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 174
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 175 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 66/141 (46%), Gaps = 7/141 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 318 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 373
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 374 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 234 VAPEYARTGYLNEKCDVYSFG 254
APE A G K DV+SFG
Sbjct: 431 TAPEAALYGRFTIKSDVWSFG 451
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 25/232 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 66 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 122
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ YL + + RDL + LV E ++ K+ +F LS + G K
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 179
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 180 TAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK-- 228
Query: 294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 229 -----DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 272
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN 174
+ H+ ++RL + E ++ E G+L D LK +LL + + +IA
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK---SDEGGKVLLPKLIDFSAQIAE 120
Query: 175 VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV 234
AY+ + + RDL+++ +LVSE + K+ +F L+ I + E +G K
Sbjct: 121 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWT 177
Query: 235 APEYARTGYLNEKCDVYSFG 254
APE G K +V+SFG
Sbjct: 178 APEAINFGCFTIKSNVWSFG 197
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G L D LK + L L + +A +IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKY---LRLPQLVDMAAQIA 290
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 347
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 348 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 378
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 236 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 291
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L I + E G K
Sbjct: 292 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKW 348
Query: 234 VAPEYARTGYLNEKCDVYSFG 254
APE A G K DV+SFG
Sbjct: 349 TAPEAALYGRFTIKSDVWSFG 369
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 97/232 (41%), Gaps = 25/232 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 70 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 126
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ YL + + RDL + LV E ++ K+ +F LS + G K
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 183
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
APE + K DV++FG + G ++ ++ V + +E
Sbjct: 184 TAPESLAYNKFSIKSDVWAFGVLLWEIATYG---------MSPYPGIDLSQVYELLEK-- 232
Query: 294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 233 -----DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 12/142 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
S ++H ++R+ G + + ++ + E G L LL++S Q P+ + A E+
Sbjct: 61 SIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS-QRFPNPVAKFY----AAEV 115
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
YLH S+ I++RDLK IL+ + K+ +F + +P+ TY + GT
Sbjct: 116 CLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-VTYX---LCGTPD 168
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE T N+ D +SFG
Sbjct: 169 YIAPEVVSTKPYNKSIDWWSFG 190
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 119
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD-GVKGTSG 232
+ YL + + RDL + LV E ++ K+ +F LS + G+T+ G K
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKFPIK 175
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G M D S + ++K
Sbjct: 176 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYG-----MSPYPGIDPSQVYELLEK----- 225
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 226 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 79 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 137
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 138 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 193
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 194 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 246
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 247 -----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 81 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 140 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 195
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 248
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 249 -----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 25/232 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 119
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ YL + + RDL + LV E ++ K+ +F LS + G K
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKW 176
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG 293
APE + K DV++FG + G M D S + ++K
Sbjct: 177 TAPESLAYNKFSIKSDVWAFGVLLWEIATYG-----MSPYPGIDPSQVYELLEK------ 225
Query: 294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 226 -----DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 269
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 82 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 141 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 196
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 197 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 249
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 250 -----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 75 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 134 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 189
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 242
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 243 -----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 144 NLHDLLK---RSYQSHSEP-------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLK 193
NL L+ + + P L L+H + + ++A +L SR + RDL
Sbjct: 119 NLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLA 175
Query: 194 SSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYS 252
+ IL+SE+ V K+ +F L+ I + + G + +APE + DV+S
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 253 FGXXXXXXXSTGEDLFNMGLRLNGDESF 280
FG S G + G+++ DE F
Sbjct: 236 FGVLLWEIFSLGASPYP-GVKI--DEEF 260
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 81 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 139
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 140 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 195
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 196 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 248
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 249 -----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 289
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 40/237 (16%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 82 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 140
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E D KG
Sbjct: 141 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE----TDXXRKGGK 193
Query: 232 GIV-----APEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVK 286
G++ +PE + G DV+SFG + E + GL F M+
Sbjct: 194 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME--- 249
Query: 287 KYIENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 250 --------GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 290
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 109 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 164
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + + G + +APE + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 225 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 251
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + ++ +IA
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKY---LRLPQLVDMSAQIA 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 122 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKW 178
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 117 HNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP-----------LLLKHR 165
H N++ L+G C L E A +GNL D L++S ++P L +
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD 225
L A ++A YL + + RDL + ILV E YV K+ +F LS E Y
Sbjct: 145 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVY--- 195
Query: 226 GVKGTSGIVAPEYARTGYLN-----EKCDVYSFGXXXXXXXSTG 264
VK T G + + LN DV+S+G S G
Sbjct: 196 -VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 238
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 117 HNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP-----------LLLKHR 165
H N++ L+G C L E A +GNL D L++S ++P L +
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD 225
L A ++A YL + + RDL + ILV E YV K+ +F LS E Y
Sbjct: 135 LHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFGLSRG---QEVY--- 185
Query: 226 GVKGTSGIVAPEYARTGYLN-----EKCDVYSFGXXXXXXXSTG 264
VK T G + + LN DV+S+G S G
Sbjct: 186 -VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 228
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + +A +IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL ++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 17/150 (11%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
+ + H N++ L G CL+ LV E A G L+ +L P +L + A++I
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDIL---VNWAVQI 114
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERY--------VPKLFNFSLSASIPEGETYID 224
A YLH PI+ RDLKSS IL+ ++ + K+ +F L+ E
Sbjct: 115 ARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR---EWHRTTK 171
Query: 225 DGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
G +APE R ++ DV+S+G
Sbjct: 172 MSAAGAYAWMAPEVIRASMFSKGSDVWSYG 201
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 109 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 164
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + + G + +APE + DV
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 225 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 251
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 103/234 (44%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 146
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 147 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 202
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 203 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 255
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 256 -----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 311 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 367
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI-DDGVKGTSG 232
+ YL + + R+L + LV E ++ K+ +F LS + G+TY G K
Sbjct: 368 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 423
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G + ++ V + +E
Sbjct: 424 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------PGIDLSQVYELLEK- 473
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 474 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 517
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQS-----HSEPLLLKHRLKIAM 170
H N++ L+G C +++ E YG+L + L+R ++ PL L+ L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGT 230
++A A+L S+ + RD+ + +L++ +V K+ +F L+ I YI VKG
Sbjct: 168 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGN 221
Query: 231 SGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
+ + +APE + DV+S+G S G
Sbjct: 222 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 259
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 118 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + + G + +APE + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 234 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 260
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 15/158 (9%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQS-----HSEPLLLKHRLKIAM 170
H N++ L+G C +++ E YG+L + L+R ++ PL L+ L +
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGT 230
++A A+L S+ + RD+ + +L++ +V K+ +F L+ I YI VKG
Sbjct: 160 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGN 213
Query: 231 SGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
+ + +APE + DV+S+G S G
Sbjct: 214 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 251
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 8/143 (5%)
Query: 112 ASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAME 171
+SQ+SH N++ +I E + LV E E L + + +SH PL + + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHG-PLSVDTAINFTNQ 119
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
I + + H IV RD+K IL+ K+F+F ++ ++ E + V GT
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 232 GIVAPEYARTGYLNEKCDVYSFG 254
+PE A+ +E D+YS G
Sbjct: 177 QYFSPEQAKGEATDECTDIYSIG 199
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 269 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQIS 325
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI-DDGVKGTSG 232
+ YL + + R+L + LV E ++ K+ +F LS + G+TY G K
Sbjct: 326 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 381
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G + ++ V + +E
Sbjct: 382 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------PGIDLSQVYELLEK- 431
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 432 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 475
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 61 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 119
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 120 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 170
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+ APE + K DV+SFG S G+
Sbjct: 171 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 206
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 63 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 121
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 122 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 172
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+ APE + K DV+SFG S G+
Sbjct: 173 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 208
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 27/233 (11%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H N+++L+G C ++ E YGNL D L+ + ++L L +A +I+
Sbjct: 272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQIS 328
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI-DDGVKGTSG 232
+ YL + + R+L + LV E ++ K+ +F LS + G+TY G K
Sbjct: 329 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKFPIK 384
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG + G + ++ V + +E
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY---------PGIDLSQVYELLEK- 434
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK 345
D R+ E K+ +EL C + DRP+ ++ + + M++
Sbjct: 435 ------DYRMERPEGCPEKV---YELMRACWQWNPSDRPSFAEIHQAFETMFQ 478
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G L D LK + L L + +A +IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKY---LRLPQLVDMAAQIA 124
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 125 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 181
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 182 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 73/156 (46%), Gaps = 13/156 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 73 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 131
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 132 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 182
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+ APE + K DV+SFG S G+
Sbjct: 183 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQ 218
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 126 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 176
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLF 268
+ APE + K DV+SFG S G+ +
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 68/151 (45%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H +++L E I +V E G+L D LK + L L + ++ +IA
Sbjct: 66 KLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKY---LRLPQLVDMSAQIA 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
+ AY+ V RDL+++ ILV E V K+ +F L+ I + E G K
Sbjct: 122 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 178
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 179 TAPEAALYGRFTIKSDVWSFGILLTELTTKG 209
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 67/151 (44%), Gaps = 7/151 (4%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
++ H+ +++L E I +V E G+L D LK L L + + +A ++A
Sbjct: 60 KLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLK---DGEGRALKLPNLVDMAAQVA 115
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AY+ + RDL+S+ ILV + K+ +F L+ I + E G K
Sbjct: 116 AGMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW 172
Query: 234 VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
APE A G K DV+SFG + G
Sbjct: 173 TAPEAALYGRFTIKSDVWSFGILLTELVTKG 203
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 142 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLF 268
+ APE + K DV+SFG S G+ +
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 83 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 141
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 142 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 192
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLF 268
+ APE + K DV+SFG S G+ +
Sbjct: 193 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 231
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 102/237 (43%), Gaps = 40/237 (16%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 73 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 131
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + +V+E + K+ +F ++ I E D KG
Sbjct: 132 IADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE----TDXXRKGGK 184
Query: 232 GIV-----APEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVK 286
G++ +PE + G DV+SFG + E + GL F M+
Sbjct: 185 GLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME--- 240
Query: 287 KYIENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D LL EL C + + RP+ +++ IK+
Sbjct: 241 --------GGLLDKPDNCPDMLL--------ELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 81 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 139
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 140 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 190
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLF 268
+ APE + K DV+SFG S G+ +
Sbjct: 191 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 229
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE-----PLLLKHRLKIAMEI 172
++V+RL+G + + +++ E G+L L+ + + P L +++A EI
Sbjct: 78 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 137
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
A+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 138 ADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLLP 193
Query: 233 I--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIE 290
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------- 245
Query: 291 NRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 246 ----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 286
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 NLHDLLKRSYQSHSEP------------LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD 191
NL L RS ++ P L L+H + + ++A +L SR + RD
Sbjct: 118 NLSTYL-RSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD 173
Query: 192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDV 250
L + IL+SE+ V K+ +F L+ I + + G + +APE + DV
Sbjct: 174 LAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 251 YSFGXXXXXXXSTGEDLFNMGLRLNGDESF 280
+SFG S G + G+++ DE F
Sbjct: 234 WSFGVLLWEIFSLGASPYP-GVKI--DEEF 260
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 100 DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP 159
+ + + F ++ H N ++ GC L LV E G+ DLL + H +P
Sbjct: 57 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----EVHKKP 111
Query: 160 LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG 219
L + AYLH S ++ RD+K+ IL+SE + KL +F ++ +
Sbjct: 112 LQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168
Query: 220 ETYIDDGVKGTSGIVAPEYART---GYLNEKCDVYSFGXXXXXXXSTGEDLFNM 270
++ GT +APE G + K DV+S G LFNM
Sbjct: 169 NXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 16/174 (9%)
Query: 100 DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP 159
+ + + F ++ H N ++ GC L LV E G+ DLL + H +P
Sbjct: 96 EKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----EVHKKP 150
Query: 160 LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG 219
L + AYLH S ++ RD+K+ IL+SE + KL +F ++ +
Sbjct: 151 LQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207
Query: 220 ETYIDDGVKGTSGIVAPEYART---GYLNEKCDVYSFGXXXXXXXSTGEDLFNM 270
++ GT +APE G + K DV+S G LFNM
Sbjct: 208 NXFV-----GTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 256
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 100/261 (38%), Gaps = 64/261 (24%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ-----------------SH 156
Q++H +V++L G C + +L+ E A+YG+L L+ S + H
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 157 SE--PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA 214
+ L + + A +I+ YL +V RDL + ILV+E K+ +F LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 215 SIPEGETYIDDGVKGTSGIVAPEYARTGYL-----NEKCDVYSFGXXXXXXXSTGEDLFN 269
+ E ++Y VK + G + ++ L + DV+SFG + G
Sbjct: 199 DVYEEDSY----VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG----- 249
Query: 270 MGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSS-------FELAFQC 322
+ GI R+ H+++ + L QC
Sbjct: 250 ---------------------GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
Query: 323 QSASAEDRPTMIDVAKQIKKM 343
+ RP D++K ++KM
Sbjct: 289 WKQEPDKRPVFADISKDLEKM 309
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 102/233 (43%), Gaps = 32/233 (13%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE-----PLLLKHRLKIAMEI 172
++V+RL+G + + +++ E G+L L+ + + P L +++A EI
Sbjct: 88 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI 147
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
A+ AYL+ + V RDL + +V+E + K+ +F ++ I E + Y G KG
Sbjct: 148 ADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLLP 203
Query: 233 I--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIE 290
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------- 255
Query: 291 NRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D L FEL C + + RP+ +++ IK+
Sbjct: 256 ----GGLLDKPDNCPDML--------FELMRMCWQYNPKMRPSFLEIISSIKE 296
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 425 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 483
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 484 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLF 268
+ APE + K DV+SFG S G+ +
Sbjct: 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 573
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 74/159 (46%), Gaps = 13/159 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 426 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 484
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E Y G
Sbjct: 485 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 535
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLF 268
+ APE + K DV+SFG S G+ +
Sbjct: 536 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 574
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 68/164 (41%), Gaps = 26/164 (15%)
Query: 117 HNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP-----------LLLKHR 165
H N++ L+G C L E A +GNL D L++S ++P L +
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD 225
L A ++A YL + + R+L + ILV E YV K+ +F LS E Y
Sbjct: 142 LHFAADVARGMDYLS---QKQFIHRNLAARNILVGENYVAKIADFGLSRG---QEVY--- 192
Query: 226 GVKGTSGIVAPEYARTGYLN-----EKCDVYSFGXXXXXXXSTG 264
VK T G + + LN DV+S+G S G
Sbjct: 193 -VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 235
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 102/234 (43%), Gaps = 34/234 (14%)
Query: 118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSE------PLLLKHRLKIAME 171
++V+RL+G + + +++ E G+L L RS + E P L +++A E
Sbjct: 75 HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYL-RSLRPEMENNPVLAPPSLSKMIQMAGE 133
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
IA+ AYL+ + V RDL + V+E + K+ +F ++ I E + Y G KG
Sbjct: 134 IADGMAYLN---ANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGG-KGLL 189
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYI 289
+ ++PE + G DV+SFG + E + GL F M+
Sbjct: 190 PVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ-GLSNEQVLRFVME------ 242
Query: 290 ENRGFNGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK 342
G++D P D LL EL C + + RP+ +++ IK+
Sbjct: 243 -----GGLLDKPDNCPDMLL--------ELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 115 MSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
+ H ++++ GCC + + LV E G+L D L R HS + L L A +I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR----HS--IGLAQLLLFAQQI 126
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
AYLH S+ + R+L + +L+ + K+ +F L+ ++PEG Y G S
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 233 IV--APEYARTGYLNEKCDVYSFG 254
+ APE + DV+SFG
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFG 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN 174
+ H+ +++L + I ++ E G+L D LK S + +PL + + +IA
Sbjct: 67 LQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLK-SDEGSKQPL--PKLIDFSAQIAE 122
Query: 175 VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV 234
A++ R + RDL+++ ILVS V K+ +F L+ I + E +G K
Sbjct: 123 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 179
Query: 235 APEYARTGYLNEKCDVYSFG 254
APE G K DV+SFG
Sbjct: 180 APEAINFGSFTIKSDVWSFG 199
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN 174
+ H+ +++L + I ++ E G+L D LK S + +PL + + +IA
Sbjct: 240 LQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLK-SDEGSKQPL--PKLIDFSAQIAE 295
Query: 175 VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV 234
A++ R + RDL+++ ILVS V K+ +F L+ I + E +G K
Sbjct: 296 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 352
Query: 235 APEYARTGYLNEKCDVYSFG 254
APE G K DV+SFG
Sbjct: 353 APEAINFGSFTIKSDVWSFG 372
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 115 MSHNNVLRLIGCCLEVEIPVL--VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
+ H ++++ GCC + L V E G+L D L R HS + L L A +I
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR----HS--IGLAQLLLFAQQI 143
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
AYLH ++ + RDL + +L+ + K+ +F L+ ++PEG G S
Sbjct: 144 CEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSP 200
Query: 233 IV--APEYARTGYLNEKCDVYSFG 254
+ APE + DV+SFG
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFG 224
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 115 MSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
+ H ++++ GCC + + LV E G+L D L R HS + L L A +I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPR----HS--IGLAQLLLFAQQI 126
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
AYLH ++ + R+L + +L+ + K+ +F L+ ++PEG Y G S
Sbjct: 127 CEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 183
Query: 233 IV--APEYARTGYLNEKCDVYSFG 254
+ APE + DV+SFG
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFG 207
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLL-LKHRLKIAME 171
Q+ + ++R+IG C E E +LV E AE G L+ L+++ + ++ L H++ + M+
Sbjct: 67 QQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMK 125
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
++H RDL + +L+ ++ K+ +F LS ++ E G
Sbjct: 126 YLEESNFVH---------RDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKW 176
Query: 232 GI--VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLF 268
+ APE + K DV+SFG S G+ +
Sbjct: 177 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY 215
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 57 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 113
Query: 138 ESAEYGNLHDLLKRSY---------QSHS--EPLLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SH+ E L K + A ++A YL S+
Sbjct: 114 EYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 170
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDXXKKTTNGRLPVKWMAPEALFD 226
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 227 RIYTHQSDVWSFG 239
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 64/261 (24%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ-----------------SH 156
Q++H +V++L G C + +L+ E A+YG+L L+ S + H
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 157 SE--PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA 214
+ L + + A +I+ YL +V RDL + ILV+E K+ +F LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 215 SIPEGETYIDDGVKGTSGIVAPEYARTGYL-----NEKCDVYSFGXXXXXXXSTGEDLFN 269
+ E D VK + G + ++ L + DV+SFG + G
Sbjct: 199 DVYEE----DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG----- 249
Query: 270 MGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSS-------FELAFQC 322
+ GI R+ H+++ + L QC
Sbjct: 250 ---------------------GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
Query: 323 QSASAEDRPTMIDVAKQIKKM 343
+ RP D++K ++KM
Sbjct: 289 WKQEPDKRPVFADISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 98/261 (37%), Gaps = 64/261 (24%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ-----------------SH 156
Q++H +V++L G C + +L+ E A+YG+L L+ S + H
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 157 SE--PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA 214
+ L + + A +I+ YL +V RDL + ILV+E K+ +F LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 215 SIPEGETYIDDGVKGTSGIVAPEYARTGYL-----NEKCDVYSFGXXXXXXXSTGEDLFN 269
+ E D VK + G + ++ L + DV+SFG + G
Sbjct: 199 DVYEE----DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG----- 249
Query: 270 MGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSS-------FELAFQC 322
+ GI R+ H+++ + L QC
Sbjct: 250 ---------------------GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQC 288
Query: 323 QSASAEDRPTMIDVAKQIKKM 343
+ RP D++K ++KM
Sbjct: 289 WKQEPDKRPVFADISKDLEKM 309
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 115 MSHNNVLRLIGCCLEV-EIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
+ H ++++ GCC + E V LV E G+L D L R ++ LL A +I
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF------AQQI 120
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
AYLH ++ + R L + +L+ + K+ +F L+ ++PEG Y G S
Sbjct: 121 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 177
Query: 233 IV--APEYARTGYLNEKCDVYSFG 254
+ APE + DV+SFG
Sbjct: 178 VFWYAPECLKECKFYYASDVWSFG 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 115 MSHNNVLRLIGCCLEV-EIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
+ H ++++ GCC + E V LV E G+L D L R ++ LL A +I
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF------AQQI 121
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
AYLH ++ + R L + +L+ + K+ +F L+ ++PEG Y G S
Sbjct: 122 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSP 178
Query: 233 IV--APEYARTGYLNEKCDVYSFG 254
+ APE + DV+SFG
Sbjct: 179 VFWYAPECLKECKFYYASDVWSFG 202
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 98 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 154
Query: 138 ESAEYGNLHDLLKR--------SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SY P L K + A ++A YL S+
Sbjct: 155 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKK 211
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 212 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 267
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 268 RIYTHQSDVWSFG 280
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 57 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 113
Query: 138 ESAEYGNLHDLLKR--------SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SY P L K + A ++A YL S+
Sbjct: 114 EYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 170
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 226
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 227 RIYTHQSDVWSFG 239
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 49 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 105
Query: 138 ESAEYGNLHDLLKR--------SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SY P L K + A ++A YL S+
Sbjct: 106 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 162
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 163 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 218
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 219 RIYTHQSDVWSFG 231
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 46 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 102
Query: 138 ESAEYGNLHDLLKR--------SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SY P L K + A ++A YL S+
Sbjct: 103 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 159
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 160 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 215
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 216 RIYTHQSDVWSFG 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 57 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 113
Query: 138 ESAEYGNLHDLLKR--------SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SY P L K + A ++A YL S+
Sbjct: 114 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 170
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 226
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 227 RIYTHQSDVWSFG 239
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 71/171 (41%), Gaps = 28/171 (16%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP---------------- 159
SH N++ L+G C L+FE YG+L + L+ + SE
Sbjct: 107 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 160 --LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP 217
L + L A ++A +L + V RDL + +LV+ V K+ +F L+ I
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 218 EGETYIDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
Y+ V+G + + +APE G K DV+S+G S G
Sbjct: 224 SDSNYV---VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAME 171
+Q+ H+N+++L+G +E + + +V E G+L D L+ +S L LK +++
Sbjct: 60 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 116
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG---VK 228
+ YL V RDL + +LVSE V K+ +F L+ E + D G VK
Sbjct: 117 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVK 170
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
T APE R + K DV+SFG
Sbjct: 171 WT----APEALREAAFSTKSDVWSFG 192
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 50 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 106
Query: 138 ESAEYGNLHDLLKR--------SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SY P L K + A ++A YL S+
Sbjct: 107 EYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 163
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 164 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 219
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 220 RIYTHQSDVWSFG 232
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 72/146 (49%), Gaps = 17/146 (11%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAME 171
+Q+ H+N+++L+G +E + + +V E G+L D L+ +S L LK +++
Sbjct: 69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 125
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG---VK 228
+ YL V RDL + +LVSE V K+ +F L+ E + D G VK
Sbjct: 126 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTGKLPVK 179
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
T APE R + K DV+SFG
Sbjct: 180 WT----APEALREKKFSTKSDVWSFG 201
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK---- 150
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 151 ----RSYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAME 171
+Q+ H+N+++L+G +E + + +V E G+L D L+ +S L LK +++
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 110
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
+ YL V RDL + +LVSE V K+ +F L+ E + D G K
Sbjct: 111 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTG-KLPV 163
Query: 232 GIVAPEYARTGYLNEKCDVYSFG 254
APE R + K DV+SFG
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFG 186
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAME 171
+Q+ H+N+++L+G +E + + +V E G+L D L+ +S L LK +++
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCL---LKFSLD 297
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTS 231
+ YL V RDL + +LVSE V K+ +F L+ E + D G K
Sbjct: 298 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTG-KLPV 350
Query: 232 GIVAPEYARTGYLNEKCDVYSFG 254
APE R + K DV+SFG
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFG 373
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 79 CQGVLP--DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV 136
C +LP D+ + VK + + A + + H +++R G C E ++V
Sbjct: 62 CHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121
Query: 137 FESAEYGNLHDLLKRSYQSHSE-----------PLLLKHRLKIAMEIANVFAYLHIGFSR 185
FE +G+L+ L RS+ ++ PL L L +A ++A YL G
Sbjct: 122 FEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH- 178
Query: 186 PIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI----VAPEYART 241
V RDL + LV + V K+ +F +S I + Y V G + + + PE
Sbjct: 179 -FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYR---VGGRTMLPIRWMPPESILY 234
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 235 RKFTTESDVWSFG 247
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQS------------------HS 157
H N++ L+G C +++ E YG+L + L+R ++
Sbjct: 93 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDG 152
Query: 158 EPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP 217
PL L+ L + ++A A+L S+ + RD+ + +L++ +V K+ +F L+ I
Sbjct: 153 RPLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 209
Query: 218 EGETYIDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
YI VKG + + +APE + DV+S+G S G
Sbjct: 210 NDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 257
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 79 CQGVLP--DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV 136
C +LP D+ + VK + + A + + H +++R G C E ++V
Sbjct: 39 CHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 98
Query: 137 FESAEYGNLHDLLKRSYQSHSE-----------PLLLKHRLKIAMEIANVFAYLHIGFSR 185
FE +G+L+ L RS+ ++ PL L L +A ++A YL G
Sbjct: 99 FEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH- 155
Query: 186 PIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI----VAPEYART 241
V RDL + LV + V K+ +F +S I + Y V G + + + PE
Sbjct: 156 -FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY---RVGGRTMLPIRWMPPESILY 211
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 212 RKFTTESDVWSFG 224
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 42 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 98
Query: 138 ESAEYGNLHDLLKRSY---------QSHS--EPLLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SH+ E L K + A ++A YL S+
Sbjct: 99 EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 155
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 156 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 211
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 212 RIYTHQSDVWSFG 224
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 24/193 (12%)
Query: 79 CQGVLP--DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV 136
C +LP D+ + VK + + A + + H +++R G C E ++V
Sbjct: 33 CHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 92
Query: 137 FESAEYGNLHDLLKRSYQSHSE-----------PLLLKHRLKIAMEIANVFAYLHIGFSR 185
FE +G+L+ L RS+ ++ PL L L +A ++A YL G
Sbjct: 93 FEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL-AGLH- 149
Query: 186 PIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI----VAPEYART 241
V RDL + LV + V K+ +F +S I + Y V G + + + PE
Sbjct: 150 -FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY---RVGGRTMLPIRWMPPESILY 205
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 206 RKFTTESDVWSFG 218
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 32/193 (16%)
Query: 84 PDRTISV-VKFIDGSVFDAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVF 137
P+R V VK + DA + ++++ +M H N++ L+G C + ++
Sbjct: 57 PNRVTKVAVKMLKS---DATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 113
Query: 138 ESAEYGNLHDLLKRSY---------QSHS--EPLLLKHRLKIAMEIANVFAYLHIGFSRP 186
E A GNL + L+ SH+ E L K + A ++A YL S+
Sbjct: 114 EYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKK 170
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYART 241
+ RDL + +LV+E V K+ +F L+ I +ID K T+G +APE
Sbjct: 171 CIHRDLAARNVLVTEDNVMKIADFGLARDI----HHIDYYKKTTNGRLPVKWMAPEALFD 226
Query: 242 GYLNEKCDVYSFG 254
+ DV+SFG
Sbjct: 227 RIYTHQSDVWSFG 239
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 132 IPVLVFESAEYGNLHDLLKRSYQSHSE-PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFR 190
+P +V E + L D++ H+E P+ K +++ IA+ L+ I+ R
Sbjct: 90 LPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIHR 140
Query: 191 DLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD--GVKGTSGIVAPEYARTGYLNEKC 248
D+K + IL+S K+ +F ++ +I + + V GT+ ++PE AR ++ +
Sbjct: 141 DVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 249 DVYSFG 254
DVYS G
Sbjct: 201 DVYSLG 206
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 132 IPVLVFESAEYGNLHDLLKRSYQSHSE-PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFR 190
+P +V E + L D++ H+E P+ K +++ IA+ L+ I+ R
Sbjct: 90 LPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIHR 140
Query: 191 DLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD--GVKGTSGIVAPEYARTGYLNEKC 248
D+K + I++S K+ +F ++ +I + + V GT+ ++PE AR ++ +
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 249 DVYSFG 254
DVYS G
Sbjct: 201 DVYSLG 206
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 132 IPVLVFESAEYGNLHDLLKRSYQSHSE-PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFR 190
+P +V E + L D++ H+E P+ K +++ IA+ L+ I+ R
Sbjct: 107 LPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIHR 157
Query: 191 DLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD--GVKGTSGIVAPEYARTGYLNEKC 248
D+K + I++S K+ +F ++ +I + + V GT+ ++PE AR ++ +
Sbjct: 158 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 217
Query: 249 DVYSFG 254
DVYS G
Sbjct: 218 DVYSLG 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 132 IPVLVFESAEYGNLHDLLKRSYQSHSE-PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFR 190
+P +V E + L D++ H+E P+ K +++ IA+ L+ I+ R
Sbjct: 90 LPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIHR 140
Query: 191 DLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD--GVKGTSGIVAPEYARTGYLNEKC 248
D+K + I++S K+ +F ++ +I + + V GT+ ++PE AR ++ +
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 249 DVYSFG 254
DVYS G
Sbjct: 201 DVYSLG 206
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 38/252 (15%)
Query: 103 DCCFNN-------IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQS 155
DC +N V + H ++++LIG +E E ++ E YG L L+R+ S
Sbjct: 51 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS 109
Query: 156 HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS 215
L+ + +++I AYL S V RD+ ILV+ KL +F LS
Sbjct: 110 LKVLTLVLY----SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 162
Query: 216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLN 275
I + + Y + ++PE DV+ F S G+ F
Sbjct: 163 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF------ 216
Query: 276 GDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTM 333
++EN+ G+++ GD L + L + L +C DRP
Sbjct: 217 ------------WLENKDVIGVLEK---GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRF 261
Query: 334 IDVAKQIKKMYK 345
++ + +Y+
Sbjct: 262 TELVCSLSDVYQ 273
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 38/252 (15%)
Query: 103 DCCFNN-------IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQS 155
DC +N V + H ++++LIG +E E ++ E YG L L+R+ S
Sbjct: 63 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS 121
Query: 156 HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS 215
L+ + +++I AYL S V RD+ ILV+ KL +F LS
Sbjct: 122 LKVLTLVLY----SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 174
Query: 216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLN 275
I + + Y + ++PE DV+ F S G+ F
Sbjct: 175 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF------ 228
Query: 276 GDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTM 333
++EN+ G+++ GD L + L + L +C DRP
Sbjct: 229 ------------WLENKDVIGVLEK---GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRF 273
Query: 334 IDVAKQIKKMYK 345
++ + +Y+
Sbjct: 274 TELVCSLSDVYQ 285
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 38/252 (15%)
Query: 103 DCCFNN-------IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQS 155
DC +N V + H ++++LIG +E E ++ E YG L L+R+ S
Sbjct: 47 DCTLDNKEKFMSEAVIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYLERNKNS 105
Query: 156 HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS 215
L+ + +++I AYL S V RD+ ILV+ KL +F LS
Sbjct: 106 LKVLTLVLY----SLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRY 158
Query: 216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLN 275
I + + Y + ++PE DV+ F S G+ F
Sbjct: 159 IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFF------ 212
Query: 276 GDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSS--FELAFQCQSASAEDRPTM 333
++EN+ G+++ GD L + L + L +C DRP
Sbjct: 213 ------------WLENKDVIGVLEK---GDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRF 257
Query: 334 IDVAKQIKKMYK 345
++ + +Y+
Sbjct: 258 TELVCSLSDVYQ 269
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 132 IPVLVFESAEYGNLHDLLKRSYQSHSE-PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFR 190
+P +V E + L D++ H+E P+ K +++ IA+ L+ I+ R
Sbjct: 90 LPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIHR 140
Query: 191 DLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD--GVKGTSGIVAPEYARTGYLNEKC 248
D+K + I++S K+ +F ++ +I + + V GT+ ++PE AR ++ +
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 249 DVYSFG 254
DVYS G
Sbjct: 201 DVYSLG 206
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ + +
Sbjct: 122 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFK 172
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 204
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 12/126 (9%)
Query: 132 IPVLVFESAEYGNLHDLLKRSYQSHSE-PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFR 190
+P +V E + L D++ H+E P+ K +++ IA+ L+ I+ R
Sbjct: 90 LPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIHR 140
Query: 191 DLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD--GVKGTSGIVAPEYARTGYLNEKC 248
D+K + I++S K+ +F ++ +I + + V GT+ ++PE AR ++ +
Sbjct: 141 DVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARS 200
Query: 249 DVYSFG 254
DVYS G
Sbjct: 201 DVYSLG 206
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +GF V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 158 SGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 21/164 (12%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--------SYQSHSEP---LLLKH 164
H N++ L+G C +++ E YG+L + L+R SY P L +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 165 RLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
L + ++A A+L S+ + RD+ + +L++ +V K+ +F L+ I YI
Sbjct: 168 LLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI- 223
Query: 225 DGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
VKG + + +APE + DV+S+G S G
Sbjct: 224 --VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 265
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ----SHSEPLLL--------- 162
+H N++ L+G C +++ E YG+L + L+R S + P ++
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 163 KHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY 222
+ L + ++A A+L S+ + RDL + IL++ + K+ +F L+ I Y
Sbjct: 145 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 223 IDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
+ VKG + + +APE + DV+S+G +LF++G
Sbjct: 202 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW-------ELFSLGSSPYPGM 251
Query: 279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK 338
+ F K E GF ++ P EH +++ C A RPT + +
Sbjct: 252 PVDSKFYKMIKE--GFR-MLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 300
Query: 339 QIKK 342
I+K
Sbjct: 301 LIEK 304
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 67 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 126
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 127 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 183
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 184 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 235
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 65 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 124
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 125 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENN 181
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 182 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 233
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 70 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 129
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 130 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 186
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 187 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 238
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 128
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 129 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 183
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 78 DATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 64/152 (42%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 63 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 122
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H R+L + ILV K+ +F L+ +P+ + Y
Sbjct: 123 QICKGMEYLGTKRYIH---------RNLATRNILVENENRVKIGDFGLTKVLPQDKEYYK 173
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 205
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ----SHSEPLLL--------- 162
+H N++ L+G C +++ E YG+L + L+R S + P ++
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 163 KHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY 222
+ L + ++A A+L S+ + RDL + IL++ + K+ +F L+ I Y
Sbjct: 163 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 223 IDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
+ VKG + + +APE + DV+S+G +LF++G
Sbjct: 220 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW-------ELFSLGSSPYPGM 269
Query: 279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK 338
+ F K E GF ++ P EH +++ C A RPT + +
Sbjct: 270 PVDSKFYKMIKE--GFR-MLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 318
Query: 339 QIKK 342
I+K
Sbjct: 319 LIEK 322
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 117 HNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR---------SYQSHSEPLLLKHRLK 167
H N++ L+G C +++ E YG+L + L+R ++ + L + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
+ ++A A+L S+ + RD+ + +L++ +V K+ +F L+ I YI V
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---V 222
Query: 228 KGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
KG + + +APE + DV+S+G S G
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 124 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 183
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 184 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 240
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 241 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 292
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ----SHSEPLLL--------- 162
+H N++ L+G C +++ E YG+L + L+R S + P ++
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 163 KHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY 222
+ L + ++A A+L S+ + RDL + IL++ + K+ +F L+ I Y
Sbjct: 161 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 223 IDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
+ VKG + + +APE + DV+S+G +LF++G
Sbjct: 218 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW-------ELFSLGSSPYPGM 267
Query: 279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK 338
+ F K E GF ++ P EH +++ C A RPT + +
Sbjct: 268 PVDSKFYKMIKE--GFR-MLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 316
Query: 339 QIKK 342
I+K
Sbjct: 317 LIEK 320
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 79 CQGVLP--DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV 136
C + P D+ + VK + + +A + + H ++++ G C+E + ++V
Sbjct: 34 CYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMV 93
Query: 137 FESAEYGNLHDLLKRS-----YQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIV 188
FE ++G+L+ L+ + P L L IA +IA YL S+ V
Sbjct: 94 FEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFV 150
Query: 189 FRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI----VAPEYARTGYL 244
RDL + LV E + K+ +F +S + + Y V G + + + PE
Sbjct: 151 HRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY---RVGGHTMLPIRWMPPESIMYRKF 207
Query: 245 NEKCDVYSFG 254
+ DV+S G
Sbjct: 208 TTESDVWSLG 217
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 114
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P D +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DTLC 168
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLG 194
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ-----RTAT 116
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P D +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---DTL 170
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLG 197
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ----SHSEPLLL--------- 162
+H N++ L+G C +++ E YG+L + L+R S + P ++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 163 KHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY 222
+ L + ++A A+L S+ + RDL + IL++ + K+ +F L+ I Y
Sbjct: 168 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 223 IDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
+ VKG + + +APE + DV+S+G +LF++G
Sbjct: 225 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW-------ELFSLGSSPYPGM 274
Query: 279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK 338
+ F K E GF ++ P EH +++ C A RPT + +
Sbjct: 275 PVDSKFYKMIKE--GFR-MLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
Query: 339 QIKK 342
I+K
Sbjct: 324 LIEK 327
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTAT 115
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P D +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDL 169
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 10/163 (6%)
Query: 97 SVFDAYDC-----CFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR 151
+FD D C I Q++H NV++ +E +V E A+ G+L ++K
Sbjct: 66 QIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKH 125
Query: 152 SYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS 211
++ + + K +++ + ++H SR ++ RD+K + + ++ V KL +
Sbjct: 126 -FKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLG 181
Query: 212 LSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
L +T + GT ++PE N K D++S G
Sbjct: 182 LGRFF-SSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 11/150 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L Q+H+E + L
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL----QAHAERIDHIKLL 120
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
+ +I YL G R + RDL + ILV K+ +F L+ +P+ +
Sbjct: 121 QYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVK 177
Query: 227 VKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 178 EPGESPIFWYAPESLTESKFSVASDVWSFG 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 95/245 (38%), Gaps = 44/245 (17%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN 174
+ H NVL+ IG + + + E + G L ++K S R+ A +IA+
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIK----SMDSQYPWSQRVSFAKDIAS 119
Query: 175 VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS------ASIPEGETYIDDG-- 226
AYLH S I+ RDL S LV E + +F L+ + PEG +
Sbjct: 120 GMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDR 176
Query: 227 -----VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESF- 280
V G +APE +EK DV+SFG L + R+N D +
Sbjct: 177 KKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIV----------LCEIIGRVNADPDYL 226
Query: 281 --EMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK 338
MDF + RGF P + S F + +C E RP+ + +
Sbjct: 227 PRTMDF---GLNVRGFLDRYCP--------PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275
Query: 339 QIKKM 343
++ +
Sbjct: 276 WLETL 280
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEI 172
++ H N++RL E LVF+ G L D++ R + S ++ H ++ +I
Sbjct: 84 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQ---QI 137
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLFNFSLSASIPEGETYIDDGVKG 229
AY H S IV R+LK +L++ + KL +F L+ + + E + G G
Sbjct: 138 LESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAG 192
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFG 254
T G ++PE + ++ D+++ G
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACG 217
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 139
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P D +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLC 193
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLG 219
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 73 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 128
Query: 174 NVFAYLH-IGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 129 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 183
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 184 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 219
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 90 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 145
Query: 174 NVFAYLH-IGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 146 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 200
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 201 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 236
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 77/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V ++ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMRIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 41/244 (16%)
Query: 116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ----SHSEPLLL--------- 162
+H N++ L+G C +++ E YG+L + L+R S + P ++
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 163 KHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY 222
+ L + ++A A+L S+ + RDL + IL++ + K+ +F L+ I Y
Sbjct: 168 EDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 223 IDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
+ VKG + + +APE + DV+S+G +LF++G
Sbjct: 225 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW-------ELFSLGSSPYPGM 274
Query: 279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK 338
+ F K E GF ++ P EH +++ C A RPT + +
Sbjct: 275 PVDSKFYKMIKE--GFR-MLSP--------EHAPAEMYDIMKTCWDADPLKRPTFKQIVQ 323
Query: 339 QIKK 342
I+K
Sbjct: 324 LIEK 327
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
+ H N++RL E LVF+ G L D++ R Y S ++ H++ +E
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQI---LESV 143
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSER---YVPKLFNFSLSASIPEGETYIDDGVKGT 230
N ++H IV RDLK +L++ + KL +F L+ + +GE G GT
Sbjct: 144 N---HIH---QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGEQQAWFGFAGT 196
Query: 231 SGIVAPEYARTGYLNEKCDVYSFG 254
G ++PE R + D+++ G
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACG 220
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 69 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 128
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 129 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 179
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 124
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 125 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 67 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 126
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 127 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 177
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 68 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 127
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 128 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 178
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 93 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 152
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 153 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 203
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 235
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 66 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 125
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 126 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 176
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 208
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 61 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 120
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 121 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 171
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 172 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 203
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 122 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 204
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 62 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 121
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 122 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 172
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 204
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 60 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 119
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 120 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 170
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 202
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 92/238 (38%), Gaps = 34/238 (14%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIA--ME 171
Q SH+N++RL G + + +++ E E G L L+ S L+ IA M+
Sbjct: 102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMK 161
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVK 228
Y+H RDL + ILV+ V K+ +F LS + PE TY G K
Sbjct: 162 YLANMNYVH---------RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA-TYTTSGGK 211
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKY 288
APE DV+SFG + GE + L+ E V K
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPY---WELSNHE------VMKA 262
Query: 289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS 346
I N GF + P + ++L QC RP D+ + K+ ++
Sbjct: 263 I-NDGFR-LPTPMDCPSAI--------YQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 100 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 155
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 156 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 210
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 211 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 246
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEI 172
++ H N++RL E LVF+ G L D++ R + S ++ H ++ +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQ---QI 114
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLFNFSLSASIPEGETYIDDGVKG 229
AY H S IV R+LK +L++ + KL +F L+ + + E + G G
Sbjct: 115 LESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAG 169
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFG 254
T G ++PE + ++ D+++ G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACG 194
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 139
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 140 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 222
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L D L++ + LL++
Sbjct: 80 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTS 139
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 140 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 190
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEI 172
++ H N++RL E LVF+ G L D++ R + S ++ H ++ +I
Sbjct: 60 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQ---QI 113
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLFNFSLSASIPEGETYIDDGVKG 229
AY H S IV R+LK +L++ + KL +F L+ + + E + G G
Sbjct: 114 LESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAG 168
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFG 254
T G ++PE + ++ D+++ G
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACG 193
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEI 172
++ H N++RL E LVF+ G L D++ R + S ++ H ++ +I
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEAD---ASHCIQ---QI 114
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLFNFSLSASIPEGETYIDDGVKG 229
AY H S IV R+LK +L++ + KL +F L+ + + E + G G
Sbjct: 115 LESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAW--HGFAG 169
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFG 254
T G ++PE + ++ D+++ G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACG 194
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
Q H NV+ L G + ++V E E G L L++ H + + + I
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRK----HDGQFTVIQLVGMLRGI 154
Query: 173 ANVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVK 228
A YL +G+ V RDL + ILV+ V K+ +F LS I PE Y G K
Sbjct: 155 AAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA-VYTTTGGK 209
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
APE + DV+S+G S GE
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 246
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRS-YQSHSEPLLLKHRLKIAME 171
++ H N+++L + +V E G L D ++KR + H ++K +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK-------Q 129
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPEGETYIDDGVK 228
+ + Y+H IV RDLK IL+ + K+ +F LS + T + D +
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT+ +APE R Y +EKCDV+S G
Sbjct: 185 GTAYYIAPEVLRGTY-DEKCDVWSAG 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 115
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ NF S P +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLC 169
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLG 195
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 64/155 (41%), Gaps = 11/155 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKGT 230
+ YL V RDL + IL++ V K+ +F LS + PE Y G K
Sbjct: 158 SGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGGKIP 213
Query: 231 SGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 214 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 73/161 (45%), Gaps = 19/161 (11%)
Query: 117 HNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR-SYQSHSEPLL--------LKHRLK 167
H N++ L+G C +++ E YG+L + L+R S ++P + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
+ ++A A+L S+ + RD+ + +L++ +V K+ +F L+ I YI V
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---V 222
Query: 228 KGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
KG + + +APE + DV+S+G S G
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLG 263
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 116
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ NF S P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLC 170
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 23/186 (12%)
Query: 85 DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGN 144
D+ + VK + A + + H ++++ G C + + ++VFE ++G+
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 145 LHDLLK------------RSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDL 192
L+ L+ + Q+ E L L L IA +IA+ YL S+ V RDL
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGE-LGLSQMLHIASQIASGMVYL---ASQHFVHRDL 159
Query: 193 KSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI----VAPEYARTGYLNEKC 248
+ LV + K+ +F +S + + Y V G + + + PE +
Sbjct: 160 ATRNCLVGANLLVKIGDFGMSRDVYSTDYY---RVGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 249 DVYSFG 254
DV+SFG
Sbjct: 217 DVWSFG 222
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ E A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 26/158 (16%)
Query: 106 FNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR 165
+N I + H N+++L + + LV E E G L E ++ +H+
Sbjct: 94 YNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF-----------EQIINRHK 142
Query: 166 L------KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV---PKLFNFSLSASI 216
I +I + YLH IV RD+K IL+ + K+ +F LS+
Sbjct: 143 FDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF 199
Query: 217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ D GT+ +APE + Y NEKCDV+S G
Sbjct: 200 SKDYKLRD--RLGTAYYIAPEVLKKKY-NEKCDVWSCG 234
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F L+ + PE Y G K
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLARVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ-----RTATY 118
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX---LX 172
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 99/244 (40%), Gaps = 40/244 (16%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
I Q+ H N++ L+ C + + LVFE ++ L DL + L + K
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL-----ELFPNGLDYQVVQKY 129
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL--FNFSLSASIPEGETYIDDG 226
+I N + H S I+ RD+K ILVS+ V KL F F+ + + P GE Y DD
Sbjct: 130 LFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP-GEVY-DDE 184
Query: 227 VKGTSGIVAPEY--ARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEM-- 282
V T APE Y + DV++ G GE LF GD +
Sbjct: 185 V-ATRWYRAPELLVGDVKY-GKAVDVWAIGCLVTEMF-MGEPLF------PGDSDIDQLY 235
Query: 283 -------DFVKKYIE----NRGFNGIVDPRIIGDELLEHKL----QSSFELAFQCQSASA 327
+ + ++ E N F G+ P I E LE + + +LA +C
Sbjct: 236 HIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDP 295
Query: 328 EDRP 331
+ RP
Sbjct: 296 DKRP 299
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 114
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT---LS 168
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLG 194
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 88/230 (38%), Gaps = 20/230 (8%)
Query: 50 RSFSAKELERATNNYHYRNIITESSIFRLCQGVLP-----DRTISVVKFIDGSVFDAYDC 104
RSF+ +E+E + H II +C G L D +++ G
Sbjct: 40 RSFT-REIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 105 CFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKH 164
+ Q H N++RL G + ++V E E G+L L+ +H +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR----THDGQFTIMQ 152
Query: 165 RLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE--T 221
+ + + YL +G+ V RDL + +LV V K+ +F LS + +
Sbjct: 153 LVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208
Query: 222 YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE-DLFNM 270
Y G K APE + DV+SFG + GE +NM
Sbjct: 209 YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H N++RL G + + ++V E E G+L L++ H + + + IA
Sbjct: 102 QFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIA 157
Query: 174 NVFAYL-HIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL +G+ V RDL + IL++ V K+ +F L + PE Y G K
Sbjct: 158 SGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-AYTTRGGKI 212
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
+PE DV+S+G S GE
Sbjct: 213 PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGE 248
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRS-YQSHSEPLLLKHRLKIAME 171
++ H N+++L + +V E G L D ++KR + H ++K +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK-------Q 129
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPEGETYIDDGVK 228
+ + Y+H IV RDLK IL+ + K+ +F LS + T + D +
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT+ +APE R Y +EKCDV+S G
Sbjct: 185 GTAYYIAPEVLRGTY-DEKCDVWSAG 209
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 28/176 (15%)
Query: 100 DAYDCCFNNIVFASQM-----SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKR--- 151
DA + +++V +M H N++ L+G C + ++ A GNL + L+
Sbjct: 78 DATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRP 137
Query: 152 -----SYQSHSEP---LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY 203
SY + P + K + ++A YL S+ + RDL + +LV+E
Sbjct: 138 PGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENN 194
Query: 204 VPKLFNFSLSASIPEGETYIDDGVKGTSG-----IVAPEYARTGYLNEKCDVYSFG 254
V K+ +F L+ I ID K T+G +APE + DV+SFG
Sbjct: 195 VMKIADFGLARDI----NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG 246
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRS-YQSHSEPLLLKHRLKIAME 171
++ H N+++L + +V E G L D ++KR + H ++K +
Sbjct: 77 KLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK-------Q 129
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPEGETYIDDGVK 228
+ + Y+H IV RDLK IL+ + K+ +F LS + T + D +
Sbjct: 130 VFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT+ +APE R Y +EKCDV+S G
Sbjct: 185 GTAYYIAPEVLRGTY-DEKCDVWSAG 209
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 17/102 (16%)
Query: 164 HRLK--------IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER---YVPKLFNFSL 212
HR+K I ++ + YLH IV RDLK +L+ + + K+ +F L
Sbjct: 129 HRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGL 185
Query: 213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
SA + E + + + + GT+ +APE R Y +EKCDV+S G
Sbjct: 186 SA-VFENQKKMKERL-GTAYYIAPEVLRKKY-DEKCDVWSIG 224
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I SQ + R G L+ ++ E G+ DLLK PL +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIA 119
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
I EI YLH S + RD+K++ +L+SE+ KL +F ++ + + + +
Sbjct: 120 TILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXF 176
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
V GT +APE + + K D++S G
Sbjct: 177 V-GTPFWMAPEVIKQSAYDFKADIWSLG 203
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 116
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALC 170
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 15/152 (9%)
Query: 109 IVFASQMSHNNVLRLIGCCLEV--EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I + H+N+++ G C L+ E YG+L + L++ + LL++
Sbjct: 65 IEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTS 124
Query: 167 KI--AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYID 224
+I ME Y+H RDL + ILV K+ +F L+ +P+ +
Sbjct: 125 QICKGMEYLGTKRYIH---------RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXK 175
Query: 225 DGVKGTSGIV--APEYARTGYLNEKCDVYSFG 254
G S I APE + DV+SFG
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ-----RTATY 118
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT---LC 172
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 113
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 167
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 113
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 167
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 118
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 172
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 118
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT---LC 172
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 173 GTLDYLPPEMIEGRMHDEKVDLWSLG 198
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 60 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 114
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLC 168
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 169 GTLDYLPPEMIEGRMHDEKVDLWSLG 194
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTA 111
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P
Sbjct: 112 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AA 165
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ GT + PE +EK D++S G
Sbjct: 166 LCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 116
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 170
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 171 GTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 76 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 130
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 131 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT---LC 184
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 185 GTLDYLPPEMIEGRMHDEKVDLWSLG 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
S + H N+LRL G + L+ E A G ++ L++ + + E+
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATYITEL 117
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
AN +Y H S+ ++ RD+K +L+ K+ +F S P + GT
Sbjct: 118 ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCGTLD 171
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+ PE +EK D++S G
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 113
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLC 167
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 40/181 (22%)
Query: 104 CCFNNIVFASQMSHNNVLRLIGCCLE----------VEIPVLVFESAEY---GNLHDLLK 150
+ ++ + ++H V+R LE V+ +F EY G L+DL+
Sbjct: 48 TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI- 106
Query: 151 RSYQSHSEPLLLKHR--LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLF 208
HSE L + ++ +I +Y+H S+ I+ RDLK I + E K+
Sbjct: 107 -----HSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIG 158
Query: 209 NFSL--------------SASIPEGETYIDDGVKGTSGIVAPEYAR-TGYLNEKCDVYSF 253
+F L S ++P + + GT+ VA E TG+ NEK D+YS
Sbjct: 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSL 217
Query: 254 G 254
G
Sbjct: 218 G 218
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ-----RTAT 116
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---TTL 170
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLG 197
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
+ H+N++RL E LVF+ G L D++ R Y S ++ H ++ +E
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADA---SHCIQQILE-- 114
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSER---YVPKLFNFSLSASIPEGETYIDDGVKGT 230
A LH +V RDLK +L++ + KL +F L+ + +G+ G GT
Sbjct: 115 ---AVLHC-HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QGDQQAWFGFAGT 169
Query: 231 SGIVAPEYARTGYLNEKCDVYSFG 254
G ++PE R + D+++ G
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACG 193
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTAT 115
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 116 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTL 169
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 170 CGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 64 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 118
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT---LC 172
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 173 GTLDYLPPEXIEGRXHDEKVDLWSLG 198
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 61 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 115
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX---LC 169
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 170 GTLDYLPPEMIEGRMHDEKVDLWSLG 195
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTAT 116
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 117 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTL 170
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 171 CGTLDYLPPEMIEGRMHDEKVDLWSLG 197
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
S + H N+LRL G + L+ E A G ++ L++ + + E+
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATYITEL 114
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
AN +Y H S+ ++ RD+K +L+ K+ +F S P + GT
Sbjct: 115 ANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCGTLD 168
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+ PE +EK D++S G
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLG 190
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTAT 111
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 112 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTL 165
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 166 CGTLDYLPPEMIEGRMHDEKVDLWSLG 192
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTAT 112
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXL 166
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 113
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELC 167
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 168 GTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 11/148 (7%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTA 114
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P
Sbjct: 115 TYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX--- 168
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ GT + PE +EK D++S G
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 85 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATY 139
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT---LC 193
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 194 GTLDYLPPEMIEGRMHDEKVDLWSLG 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 11/147 (7%)
Query: 108 NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLK 167
+ S + H N+LRL G + L+ E A G ++ L++ + +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTAT 112
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
E+AN +Y H S+ ++ RD+K +L+ K+ +F S P +
Sbjct: 113 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX---L 166
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++S G
Sbjct: 167 CGTLDYLPPEMIEGRMHDEKVDLWSLG 193
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R Y L+L A ++
Sbjct: 67 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQL 120
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 178 WMAPESINFRRFTSASDVWMFG 199
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 30/227 (13%)
Query: 114 QMSHNNVLRLIGCCLE------VEIPVLVFESAEYGNLHDLLKRSYQSHSE-PLLLKHRL 166
+ H +V +L+G L + IP+++ ++G+LH L S + L L+ +
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLV 140
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD- 225
+ ++IA YL SR + RDL + +++E + +F LS I G+ Y
Sbjct: 141 RFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGC 197
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFV 285
K +A E DV++FG + G+ + G E+ E+
Sbjct: 198 ASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA------GIENAEI--- 248
Query: 286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT 332
Y G N + P +E+ ++L +QC SA + RP+
Sbjct: 249 --YNYLIGGNRLKQPPECMEEV--------YDLMYQCWSADPKQRPS 285
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R Y L+L A ++
Sbjct: 67 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQL 120
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 178 WMAPESINFRRFTSASDVWMFG 199
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R Y L+L A ++
Sbjct: 69 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQL 122
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 123 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 180 WMAPESINFRRFTSASDVWMFG 201
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R Y L+L A ++
Sbjct: 70 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQL 123
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 124 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 180
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 181 WMAPESINFRRFTSASDVWMFG 202
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R Y L+L A ++
Sbjct: 64 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQL 117
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 118 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 175 WMAPESINFRRFTSASDVWMFG 196
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
+ H N++RL E L+F+ G L D++ R Y S ++ H ++ +E
Sbjct: 78 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA---SHCIQQILE-- 132
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLFNFSLSASIPEGETYIDDGVKGT 230
A LH +V RDLK +L++ + KL +F L+ + EGE G GT
Sbjct: 133 ---AVLHC-HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGT 187
Query: 231 SGIVAPEYARTGYLNEKCDVYSFG 254
G ++PE R + D+++ G
Sbjct: 188 PGYLSPEVLRKDPYGKPVDLWACG 211
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R Y L+L A ++
Sbjct: 72 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQL 125
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 126 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 183 WMAPESINFRRFTSASDVWMFG 204
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R Y L+L A ++
Sbjct: 95 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKYSLDLASLIL-----YAYQL 148
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 149 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 206 WMAPESINFRRFTSASDVWMFG 227
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 89/233 (38%), Gaps = 26/233 (11%)
Query: 50 RSFSAKELERATNNYHYRNIITESSIFRLCQGVLP-----DRTISVVKFIDGSVFDAYDC 104
RSF+ +E+E + H II +C G L D +++ G
Sbjct: 40 RSFT-REIE--ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 105 CFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKH 164
+ Q H N++RL G + ++V E E G+L L+ +H +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR----THDGQFTIMQ 152
Query: 165 RLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI 223
+ + + YL +G+ V RDL + +LV V K+ +F LS + E
Sbjct: 153 LVGMLRGVGAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLSRVL---EDDP 205
Query: 224 DDGVKGTSGIV-----APEYARTGYLNEKCDVYSFGXXXXXXXSTGE-DLFNM 270
D T G + APE + DV+SFG + GE +NM
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+++H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 272
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 273 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 95/237 (40%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+++H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 149 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 258
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 259 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 12/165 (7%)
Query: 91 VKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK 150
VK +D + FN +V H+NV+ + L + +V E E G L D++
Sbjct: 75 VKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVT 134
Query: 151 RSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF 210
+ + + + + + +YLH ++ ++ RD+KS IL++ KL +F
Sbjct: 135 HTRMNEEQ------IATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDF 185
Query: 211 SLSASIPEGETYIDDGVKGTSGIVAPEY-ARTGYLNEKCDVYSFG 254
A + + E + GT +APE +R Y E D++S G
Sbjct: 186 GFCAQVSK-EVPKRKXLVGTPYWMAPEVISRLPYGTE-VDIWSLG 228
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 17/140 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN 174
+ H+ +++L + I ++ E G+L D LK S + +PL + + +IA
Sbjct: 234 LQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLK-SDEGSKQPL--PKLIDFSAQIAE 289
Query: 175 VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV 234
A++ R + RDL+++ ILVS V K+ +F L+ G K
Sbjct: 290 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWT 336
Query: 235 APEYARTGYLNEKCDVYSFG 254
APE G K DV+SFG
Sbjct: 337 APEAINFGSFTIKSDVWSFG 356
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 80 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 139
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 140 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 197 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 249
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 250 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 292
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGC 205
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 258
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 259 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 257
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 258 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 106 FNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR 165
+ + + M H +++RL+G CL I LV + +G L + + + LLL
Sbjct: 65 MDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW- 122
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE--TYI 223
++IA YL R +V RDL + +LV K+ +F L A + EG+ Y
Sbjct: 123 ---CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGL-ARLLEGDEKEYN 175
Query: 224 DDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
DG K +A E + DV+S+G
Sbjct: 176 ADGGKMPIKWMALECIHYRKFTHQSDVWSYG 206
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 272
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 273 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 95 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 154
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 155 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 211
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 212 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 264
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 265 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 307
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 89 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 148
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 149 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 206 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 258
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 259 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 301
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 103 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 162
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 163 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 220 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 272
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 273 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 315
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 88 SKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 147
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 148 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 205 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 257
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 258 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 10/167 (5%)
Query: 88 ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
+ VK +D + FN +V H NV+ + L + +V E E G L D
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD 160
Query: 148 LLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL 207
++ + + + IA V L + ++ ++ RD+KS IL++ KL
Sbjct: 161 IVTHTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKL 211
Query: 208 FNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+F A + E + GT +APE + D++S G
Sbjct: 212 SDFGFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 257
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Query: 91 VKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK 150
VK +D + FN +V H NV+ + L + +V E E G L D++
Sbjct: 59 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 118
Query: 151 RSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF 210
+ + + IA V L + ++ ++ RD+KS IL++ KL +F
Sbjct: 119 HTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 169
Query: 211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
A + E + GT +APE + D++S G
Sbjct: 170 GFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 212
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKI 168
+SH +++L G C + ++ E G L + L+ ++HR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++ YL S+ + RDL + LV+++ V K+ +F LS + + E G K
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSK 167
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
PE + K D+++FG S G+
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 91 VKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK 150
VK +D + FN +V H NV+ + L + +V E E G L D++
Sbjct: 54 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 113
Query: 151 RSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF 210
+ + + IA V L + ++ ++ RD+KS IL++ KL +F
Sbjct: 114 HTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 164
Query: 211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
A + + E + GT +APE + D++S G
Sbjct: 165 GFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 207
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 67/164 (40%), Gaps = 10/164 (6%)
Query: 91 VKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK 150
VK +D + FN +V H NV+ + L + +V E E G L D++
Sbjct: 50 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 109
Query: 151 RSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF 210
+ + + IA V L + ++ ++ RD+KS IL++ KL +F
Sbjct: 110 HTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 160
Query: 211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
A + + E + GT +APE + D++S G
Sbjct: 161 GFCAQVSK-EVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 203
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Query: 91 VKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK 150
VK +D + FN +V H NV+ + L + +V E E G L D++
Sbjct: 181 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 240
Query: 151 RSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF 210
+ + + IA V L + ++ ++ RD+KS IL++ KL +F
Sbjct: 241 HTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 291
Query: 211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
A + E + GT +APE + D++S G
Sbjct: 292 GFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 334
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 105 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 164
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 165 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 221
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 222 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 274
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 275 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 317
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q H ++++LIG E + ++ E G L L Q L L + A +++
Sbjct: 67 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFL----QVRKFSLDLASLILYAYQLS 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGI 233
AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKW 178
Query: 234 VAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 179 MAPESINFRRFTSASDVWMFG 199
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R + L+L A ++
Sbjct: 447 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLIL-----YAYQL 500
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 501 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 558 WMAPESINFRRFTSASDVWMFG 579
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 10/164 (6%)
Query: 91 VKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK 150
VK +D + FN +V H NV+ + L + +V E E G L D++
Sbjct: 61 VKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT 120
Query: 151 RSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF 210
+ + + IA V L + ++ ++ RD+KS IL++ KL +F
Sbjct: 121 HTRMNEEQ---------IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDF 171
Query: 211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
A + E + GT +APE + D++S G
Sbjct: 172 GFCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLG 214
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 118 MVMEYAPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ K+ +F L+ + +G T+ + GT +APE + N+ D ++ G
Sbjct: 170 ENLMIDQQGYIKVTDFGLAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNE 246
IV+RDLK IL+ + ++ + L+ +PEG+T G GT G +APE +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI--KGRVGTVGYMAPEVVKNERYTF 364
Query: 247 KCDVYSFG 254
D ++ G
Sbjct: 365 SPDWWALG 372
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 106 FNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR 165
+ + + M H +++RL+G CL I LV + +G L + + + LLL
Sbjct: 88 MDEALIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW- 145
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE--TYI 223
++IA YL R +V RDL + +LV K+ +F L A + EG+ Y
Sbjct: 146 ---CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGL-ARLLEGDEKEYN 198
Query: 224 DDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
DG K +A E + DV+S+G
Sbjct: 199 ADGGKMPIKWMALECIHYRKFTHQSDVWSYG 229
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I SQ V + G L+ ++ E G+ DLL+ PL
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIA 127
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
I EI YLH S + RD+K++ +L+SE KL +F ++ + + + +
Sbjct: 128 TILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 184
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
V GT +APE + + K D++S G
Sbjct: 185 V-GTPFWMAPEVIKQSAYDSKADIWSLG 211
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNE 246
IV+RDLK IL+ + ++ + L+ +PEG+T G GT G +APE +
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI--KGRVGTVGYMAPEVVKNERYTF 364
Query: 247 KCDVYSFG 254
D ++ G
Sbjct: 365 SPDWWALG 372
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I SQ V + G L+ ++ E G+ DLL+ PL
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIA 107
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
I EI YLH S + RD+K++ +L+SE KL +F ++ + + + +
Sbjct: 108 TILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTF 164
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
V GT +APE + + K D++S G
Sbjct: 165 V-GTPFWMAPEVIKQSAYDSKADIWSLG 191
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 174
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 175 DIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 231
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 232 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 284
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 285 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 327
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R + L+L A ++
Sbjct: 447 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLIL-----YAYQL 500
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + Y K
Sbjct: 501 STALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 558 WMAPESINFRRFTSASDVWMFG 579
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 129 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 189 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 246 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 298
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 299 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 341
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I SQ V + G L+ ++ E G+ DLL+ PL
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIA 107
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
I EI YLH S + RD+K++ +L+SE KL +F ++ + + + +
Sbjct: 108 TILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF 164
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
V GT +APE + + K D++S G
Sbjct: 165 V-GTPFWMAPEVIKQSAYDSKADIWSLG 191
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I SQ V + G L+ ++ E G+ DLL+ PL
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIA 122
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDG 226
I EI YLH S + RD+K++ +L+SE KL +F ++ + + + +
Sbjct: 123 TILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXF 179
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFG 254
V GT +APE + + K D++S G
Sbjct: 180 V-GTPFWMAPEVIKQSAYDSKADIWSLG 206
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 94/237 (39%), Gaps = 32/237 (13%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP--LLLKHRLKIAM 170
S+ +H N++R IG L+ ++ E G+L L+ + S+P L + L +A
Sbjct: 106 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 165
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLSASIPEGETYIDDGV 227
+IA YL + RD+ + L++ V K+ +F ++ I Y G
Sbjct: 166 DIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 228 KGTS-GIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFE--MDF 284
+ PE G K D +SFG ++F++G +S + ++F
Sbjct: 223 AMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW-------EIFSLGYMPYPSKSNQEVLEF 275
Query: 285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK 341
V G +DP ++ + + QC EDRP + ++I+
Sbjct: 276 VTS-------GGRMDPP-------KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 318
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKI 168
+SH +++L G C + ++ E G L + L+ ++HR L++
Sbjct: 61 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 110
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++ YL S+ + RDL + LV+++ V K+ +F LS + + E G K
Sbjct: 111 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 167
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
PE + K D+++FG S G+
Sbjct: 168 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 204
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKI 168
+SH +++L G C + ++ E G L + L+ ++HR L++
Sbjct: 56 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 105
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++ YL S+ + RDL + LV+++ V K+ +F LS + + E G K
Sbjct: 106 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 162
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
PE + K D+++FG S G+
Sbjct: 163 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 199
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 64/158 (40%), Gaps = 15/158 (9%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLK--HRLKIAM 170
Q H N++ L G + + ++V E E G+L LK++ + L+ + M
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGM 137
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGV 227
+ + Y+H RDL + IL++ V K+ +F LS + PE Y G
Sbjct: 138 KYLSDMGYVH---------RDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGG 187
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
K APE DV+S+G S GE
Sbjct: 188 KIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGE 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 160 LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG 219
L L+H + + ++A +L SR + RDL + IL+SE+ V K+ +F L+ I +
Sbjct: 190 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 220 ETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
Y+ G + +APE + DV+SFG S G + G+++ DE
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKI--DE 303
Query: 279 SF 280
F
Sbjct: 304 EF 305
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 144 NLHDLLK 150
NL L+
Sbjct: 113 NLSTYLR 119
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKI 168
+SH +++L G C + ++ E G L + L+ ++HR L++
Sbjct: 60 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 109
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++ YL S+ + RDL + LV+++ V K+ +F LS + + E G K
Sbjct: 110 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 166
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
PE + K D+++FG S G+
Sbjct: 167 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 203
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 20/169 (11%)
Query: 91 VKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK 150
VK +D + FN +V H NV+ + L E ++ E + G L D++
Sbjct: 75 VKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIV- 133
Query: 151 RSYQSHSEPLLLKHRLKIAME-IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFN 209
S+ L + ++ E + AYLH ++ ++ RD+KS IL++ KL +
Sbjct: 134 ------SQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSD 184
Query: 210 F----SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
F +S +P+ + + GT +APE + D++S G
Sbjct: 185 FGFCAQISKDVPKRKXLV-----GTPYWMAPEVISRSLYATEVDIWSLG 228
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 160 LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG 219
L L+H + + ++A +L SR + RDL + IL+SE+ V K+ +F L+ I +
Sbjct: 188 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 220 ETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
Y+ G + +APE + DV+SFG S G + G+++ DE
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKI--DE 301
Query: 279 SF 280
F
Sbjct: 302 EF 303
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 144 NLHDLLK 150
NL L+
Sbjct: 111 NLSTYLR 117
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKI 168
+SH +++L G C + ++ E G L + L+ ++HR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 125
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++ YL S+ + RDL + LV+++ V K+ +F LS + + E G K
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSK 182
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
PE + K D+++FG S G+
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 14/144 (9%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNL-HDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
+ H N++RL E L+F+ G L D++ R Y S ++ H ++ +E
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADA---SHCIQQILE-- 121
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLFNFSLSASIPEGETYIDDGVKGT 230
A LH +V R+LK +L++ + KL +F L+ + EGE G GT
Sbjct: 122 ---AVLHC-HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGT 176
Query: 231 SGIVAPEYARTGYLNEKCDVYSFG 254
G ++PE R + D+++ G
Sbjct: 177 PGYLSPEVLRKDPYGKPVDLWACG 200
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 160 LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG 219
L L+H + + ++A +L SR + RDL + IL+SE+ V K+ +F L+ I +
Sbjct: 195 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 220 ETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
Y+ G + +APE + DV+SFG S G + G+++ DE
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKI--DE 308
Query: 279 SF 280
F
Sbjct: 309 EF 310
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 144 NLHDLLK 150
NL L+
Sbjct: 118 NLSTYLR 124
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 11/144 (7%)
Query: 115 MSHNNVLRLIGCCLE--VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
+ H N+++ G C E L+ E G+L + L ++ + LK +LK A++I
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQI 123
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE--TYIDDGVKGT 230
YL SR V RDL + +LV + K+ +F L+ +I + + D
Sbjct: 124 CKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSP 180
Query: 231 SGIVAPEYARTGYLNEKCDVYSFG 254
APE DV+SFG
Sbjct: 181 VFWYAPECLMQSKFYIASDVWSFG 204
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 117 HNNVLRLIGCCLE--VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN 174
H N+++ G C E L+ E G+L + L ++ + LK +LK A++I
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICK 137
Query: 175 VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE--TYIDDGVKGTSG 232
YL SR V RDL + +LV + K+ +F L+ +I + + D
Sbjct: 138 GMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF 194
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
APE DV+SFG
Sbjct: 195 WYAPECLMQSKFYIASDVWSFG 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 119 MVLEYAPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+L+ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 171 ENLLIDQQGYIKVADFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 226
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Query: 160 LLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG 219
L L+H + + ++A +L SR + RDL + IL+SE+ V K+ +F L+ I +
Sbjct: 197 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 220 ETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDE 278
Y+ G + +APE + DV+SFG S G + G+++ DE
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP-GVKI--DE 310
Query: 279 SF 280
F
Sbjct: 311 EF 312
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ + + + + H+ NV+ L+G C + P++V E ++G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 144 NLHDLLK 150
NL L+
Sbjct: 120 NLSTYLR 126
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKI 168
+SH +++L G C + ++ E G L + L+ ++HR L++
Sbjct: 67 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 116
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++ YL S+ + RDL + LV+++ V K+ +F LS + + E G K
Sbjct: 117 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 173
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
PE + K D+++FG S G+
Sbjct: 174 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 210
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 19/157 (12%)
Query: 115 MSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKI 168
+SH +++L G C + ++ E G L + L+ ++HR L++
Sbjct: 76 LSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE----------MRHRFQTQQLLEM 125
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++ YL S+ + RDL + LV+++ V K+ +F LS + + E G K
Sbjct: 126 CKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSK 182
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
PE + K D+++FG S G+
Sbjct: 183 FPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGK 219
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGT 230
EI YLH S + RD+K++ +L+SE+ KL +F ++ + + + + V GT
Sbjct: 128 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GT 183
Query: 231 SGIVAPEYARTGYLNEKCDVYSFG 254
+APE + + K D++S G
Sbjct: 184 PFWMAPEVIQQSAYDSKADIWSLG 207
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 40/181 (22%)
Query: 104 CCFNNIVFASQMSHNNVLRLIGCCLE----------VEIPVLVFESAEY---GNLHDLLK 150
+ ++ + ++H V+R LE V+ +F EY L+DL+
Sbjct: 48 TILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLI- 106
Query: 151 RSYQSHSEPLLLKHR--LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLF 208
HSE L + ++ +I +Y+H S+ I+ RDLK I + E K+
Sbjct: 107 -----HSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIG 158
Query: 209 NFSL--------------SASIPEGETYIDDGVKGTSGIVAPEYAR-TGYLNEKCDVYSF 253
+F L S ++P + + GT+ VA E TG+ NEK D+YS
Sbjct: 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAMYVATEVLDGTGHYNEKIDMYSL 217
Query: 254 G 254
G
Sbjct: 218 G 218
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 118 MVMEYAPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ ++ +F L+ + +G T+ + GT +APE + N+ D ++ G
Sbjct: 170 ENLMIDQQGYIQVTDFGLAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 225
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
LV E G L D L+R H L L + +I YL SR V RDL +
Sbjct: 103 LVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 155
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV--APEYARTGYLNEKCDVYS 252
ILV K+ +F L+ +P + Y G S I APE + + DV+S
Sbjct: 156 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 215
Query: 253 FG 254
FG
Sbjct: 216 FG 217
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 79/215 (36%), Gaps = 20/215 (9%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
LV E G L D L+R H L L + +I YL SR V RDL +
Sbjct: 90 LVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 142
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV--APEYARTGYLNEKCDVYS 252
ILV K+ +F L+ +P + Y G S I APE + + DV+S
Sbjct: 143 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 202
Query: 253 FGXXXXXXXSTGEDLFNMG---LRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLE 309
FG + + + LR+ G E + + P E+
Sbjct: 203 FGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEV-- 260
Query: 310 HKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMY 344
EL C + S +DRP+ + Q+ ++
Sbjct: 261 ------HELMKLCWAPSPQDRPSFSALGPQLDMLW 289
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 119 MVMEYAPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 226
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 118 MVMEYAPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 225
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 103 DCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRSYQSHSEPLL 161
+ + Q+ H N+++L + LV E G L D ++ R S +
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA- 129
Query: 162 LKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPE 218
+I ++ + Y+H IV RDLK +L+ + ++ +F LS E
Sbjct: 130 -----RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 180
Query: 219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ D + GT+ +APE Y +EKCDV+S G
Sbjct: 181 ASKKMKDKI-GTAYYIAPEVLHGTY-DEKCDVWSTG 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI--AM 170
Q H N++ L G + + +++ E E G+L L+++ + L+ I M
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGM 123
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGV 227
+ + +Y+H RDL + ILV+ V K+ +F +S + PE Y G
Sbjct: 124 KYLSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGG 173
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
K APE DV+S+G S GE
Sbjct: 174 KIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 211
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 119 MVMEYAPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 226
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 119 MVMEYAPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 226
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 51/122 (41%), Gaps = 9/122 (7%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
LV E G L D L+R H L L + +I YL SR V RDL +
Sbjct: 91 LVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 143
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV--APEYARTGYLNEKCDVYS 252
ILV K+ +F L+ +P + Y G S I APE + + DV+S
Sbjct: 144 RNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 203
Query: 253 FG 254
FG
Sbjct: 204 FG 205
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 65/157 (41%), Gaps = 15/157 (9%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI--AME 171
Q H N++ L G + + +++ E E G+L L+++ + L+ I M+
Sbjct: 71 QFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVK 228
+ +Y+H RDL + ILV+ V K+ +F +S + PE Y G K
Sbjct: 131 YLSDMSYVH---------RDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGK 180
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
APE DV+S+G S GE
Sbjct: 181 IPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 217
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF----SRP-IVF 189
L+ E+G+L+D L+R EP L L++A+ A A+LH+ +P I
Sbjct: 83 LITHYHEHGSLYDFLQRQTL---EPHLA---LRLAVSAACGLAHLHVEIFGTQGKPAIAH 136
Query: 190 RDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK---GTSGIVAPEY----ARTG 242
RD KS +LV + + L+ +G Y+D G GT +APE RT
Sbjct: 137 RDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTD 196
Query: 243 YLN--EKCDVYSFG 254
+ D+++FG
Sbjct: 197 CFESYKWTDIWAFG 210
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 103 DCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRSYQSHSEPLL 161
+ + Q+ H N+++L + LV E G L D ++ R S +
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA- 153
Query: 162 LKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPE 218
+I ++ + Y+H IV RDLK +L+ + ++ +F LS E
Sbjct: 154 -----RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 204
Query: 219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ D + GT+ +APE Y +EKCDV+S G
Sbjct: 205 ASKKMKDKI-GTAYYIAPEVLHGTY-DEKCDVWSTG 238
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 95/256 (37%), Gaps = 67/256 (26%)
Query: 86 RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN-NVLRLIGCCLEVEIPVLVF-ESAEYG 143
RT++V +G+ Y + + + H+ NV+ L+G C + P++V E +YG
Sbjct: 58 RTVAVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYG 117
Query: 144 NLHDLLK---------RSYQSHSEPLLLKHRLKIAME---------IANVFAYLHIGFS- 184
NL + LK + H EP K +++ +E + + ++ GF
Sbjct: 118 NLSNYLKSKRDLFFLNKDAALHMEP--KKEKMEPGLEQGKKPRLDSVTSSESFASSGFQE 175
Query: 185 ------------------RPIVFRDLKS------------------------SYILVSER 202
PI DL S IL+SE
Sbjct: 176 DKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSEN 235
Query: 203 YVPKLFNFSLSASIPEGETYIDDG-VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXX 261
V K+ +F L+ I + Y+ G + +APE + K DV+S+G
Sbjct: 236 NVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIF 295
Query: 262 STGEDLFNMGLRLNGD 277
S G + G++++ D
Sbjct: 296 SLGGSPYP-GVQMDED 310
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 103 DCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRSYQSHSEPLL 161
+ + Q+ H N+++L + LV E G L D ++ R S +
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA- 152
Query: 162 LKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPE 218
+I ++ + Y+H IV RDLK +L+ + ++ +F LS E
Sbjct: 153 -----RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 203
Query: 219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ D + GT+ +APE Y +EKCDV+S G
Sbjct: 204 ASKKMKDKI-GTAYYIAPEVLHGTY-DEKCDVWSTG 237
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 103 DCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRSYQSHSEPLL 161
+ + Q+ H N+++L + LV E G L D ++ R S +
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAA- 135
Query: 162 LKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPE 218
+I ++ + Y+H IV RDLK +L+ + ++ +F LS E
Sbjct: 136 -----RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-E 186
Query: 219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ D + GT+ +APE Y +EKCDV+S G
Sbjct: 187 ASKKMKDKI-GTAYYIAPEVLHGTY-DEKCDVWSTG 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLK-RSYQSHSEPLLLKHRLKIAMEI 172
Q H ++++LIG E + ++ E G L L+ R + L+L A ++
Sbjct: 67 QFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVRKFSLDLASLIL-----YAYQL 120
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
+ AYL S+ V RD+ + +LVS KL +F LS + + K
Sbjct: 121 STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE DV+ FG
Sbjct: 178 WMAPESINFRRFTSASDVWMFG 199
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E G++ L+R SEP H A +I F YLH S +++RDLK
Sbjct: 118 MVMEYMPGGDMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+L+ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 225
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E G++ L+R SEP H A +I F YLH S +++RDLK
Sbjct: 118 MVMEYMPGGDMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+L+ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 225
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 118 MVMEYVPGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+L+ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 170 ENLLIDQQGYIKVADFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 225
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 95/231 (41%), Gaps = 28/231 (12%)
Query: 114 QMSHNNVLRLIGCCLEVEIPV-LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
++SH +++ G C + E P+ +V E G L + L+ SH + L L++ ++
Sbjct: 59 KLSHPKLVKFYGVCSK-EYPIYIVTEYISNGCLLNYLR----SHGKGLEPSQLLEMCYDV 113
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSG 232
A+L S + RDL + LV K+ +F ++ + + + G K
Sbjct: 114 CEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK 170
Query: 233 IVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLRLNGDESFEMDFVKKYIENR 292
APE + K DV++FG S G+ ++ L N + ++ ++
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD--LYTNSEVVLKV--------SQ 220
Query: 293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKM 343
G + + P + D + +++ + C E RPT + I+ +
Sbjct: 221 G-HRLYRPHLASDTI--------YQIMYSCWHELPEKRPTFQQLLSSIEPL 262
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E G + L+R SEP H A +I F YLH S +++RDLK
Sbjct: 105 MVMEYVAGGEMFSHLRR-IGRFSEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 156
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+L+ E+ ++ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 157 ENLLIDEQGYIQVTDFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 212
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 11/156 (7%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEI 172
Q H N++ L G + + +++ E E G+L L+++ + + + + I
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT----VIQLVGMLRGI 140
Query: 173 ANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI---PEGETYIDDGVKG 229
+ YL V RDL + ILV+ V K+ +F +S + PE Y G K
Sbjct: 141 GSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGKI 196
Query: 230 TSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
APE DV+S+G S GE
Sbjct: 197 PIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGE 232
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R EP H A +I F YLH S +++RDLK
Sbjct: 118 MVMEYAPGGEMFSHLRR-IGRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 169
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 170 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 225
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 12/120 (10%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+V E A G + L+R EP H A +I F YLH S +++RDLK
Sbjct: 119 MVMEYAPGGEMFSHLRR-IGRFXEP----HARFYAAQIVLTFEYLH---SLDLIYRDLKP 170
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+++ ++ K+ +F + + +G T+ + GT +APE + N+ D ++ G
Sbjct: 171 ENLMIDQQGYIKVTDFGFAKRV-KGRTWX---LCGTPEYLAPEIILSKGYNKAVDWWALG 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK + + E L K+++ + AYL I+ RD+K
Sbjct: 91 ICMEHMDGGSLDQVLKEAKRIPEEILG-----KVSIAVLRGLAYLR--EKHQIMHRDVKP 143
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT +APE + + + + D++S G
Sbjct: 144 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMAPERLQGTHYSVQSDIWSMG 200
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 27/170 (15%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLL--------------KRSYQSHSE 158
+++ H NV+ L+G + + ++F +G+LH+ L R+ +S E
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 159 PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE 218
P H + +IA YL S +V +DL + +LV ++ K+ + L +
Sbjct: 127 PPDFVH---LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 219 GETYIDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
+ Y + G S + +APE G + D++S+G S G
Sbjct: 181 ADYY---KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 227
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 27/170 (15%)
Query: 113 SQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLL--------------KRSYQSHSE 158
+++ H NV+ L+G + + ++F +G+LH+ L R+ +S E
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 159 PLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE 218
P H + +IA YL S +V +DL + +LV ++ K+ + L +
Sbjct: 144 PPDFVH---LVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 219 GETYIDDGVKGTSGI----VAPEYARTGYLNEKCDVYSFGXXXXXXXSTG 264
+ Y + G S + +APE G + D++S+G S G
Sbjct: 198 ADYY---KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG 244
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 73/181 (40%), Gaps = 40/181 (22%)
Query: 104 CCFNNIVFASQMSHNNVLRLIGCCLE----------VEIPVLVFESAEY---GNLHDLLK 150
+ + + ++H V+R LE V+ +F EY L+DL+
Sbjct: 48 TILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLI- 106
Query: 151 RSYQSHSEPLLLKHR--LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLF 208
HSE L + ++ +I +Y+H S+ I+ R+LK I + E K+
Sbjct: 107 -----HSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIG 158
Query: 209 NFSL--------------SASIPEGETYIDDGVKGTSGIVAPEYAR-TGYLNEKCDVYSF 253
+F L S ++P + + GT+ VA E TG+ NEK D YS
Sbjct: 159 DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAI-GTAXYVATEVLDGTGHYNEKIDXYSL 217
Query: 254 G 254
G
Sbjct: 218 G 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 37 VKIVD--MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 95 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 143
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 79 CQGVL--PDRTISVVKFID-GSVFDA-YDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV 134
CQ + D I V K +D GS+ +A + + ++ H N++R ++
Sbjct: 22 CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT 81
Query: 135 L--VFESAEYGNLHDLLKRSYQSHS---EPLLLKHRLKIAMEIANVFAYLHIGFSRPIVF 189
L V E E G+L ++ + + E +L+ ++ + + G + ++
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT--VLH 139
Query: 190 RDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCD 249
RDLK + + + + KL +F L+ + E + + V GT ++PE NEK D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNRMSYNEKSD 198
Query: 250 VYSFG 254
++S G
Sbjct: 199 IWSLG 203
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 50/122 (40%), Gaps = 9/122 (7%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
LV E G L D L+R H L L + +I YL SR V RDL +
Sbjct: 87 LVMEYLPSGCLRDFLQR----HRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAA 139
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIV--APEYARTGYLNEKCDVYS 252
ILV K+ +F L+ +P + G S I APE + + DV+S
Sbjct: 140 RNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWS 199
Query: 253 FG 254
FG
Sbjct: 200 FG 201
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 154 QSHSEPLLLKHRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYVPKLFNFSL 212
+S + L + + +EI +YLH IG +V+ DLK I+++E + KL +
Sbjct: 173 RSKGQKLPVAEAIAYLLEILPALSYLHSIG----LVYNDLKPENIMLTEEQL-KLIDLGA 227
Query: 213 SASIPE-GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ I G Y GT G APE RTG D+Y+ G
Sbjct: 228 VSRINSFGYLY------GTPGFQAPEIVRTGP-TVATDIYTVG 263
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 95 DGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ 154
D S ++ ++++ + H +++RL+G C + LV + G+L D + R ++
Sbjct: 52 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHV-RQHR 109
Query: 155 SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA 214
P LL L ++IA YL +V R+L + +L+ ++ +F ++
Sbjct: 110 GALGPQLL---LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163
Query: 215 SI-PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLR 273
+ P+ + + K +A E G + DV+S+G + G + + GLR
Sbjct: 164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA-GLR 222
Query: 274 L 274
L
Sbjct: 223 L 223
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 95 DGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQ 154
D S ++ ++++ + H +++RL+G C + LV + G+L D + R ++
Sbjct: 70 DKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHV-RQHR 127
Query: 155 SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA 214
P LL L ++IA YL +V R+L + +L+ ++ +F ++
Sbjct: 128 GALGPQLL---LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVAD 181
Query: 215 SI-PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGEDLFNMGLR 273
+ P+ + + K +A E G + DV+S+G + G + + GLR
Sbjct: 182 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA-GLR 240
Query: 274 L 274
L
Sbjct: 241 L 241
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
A EI +LH S+ IV+RDLK IL+ + K+ +F + G+ ++
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC- 180
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE N D +SFG
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFG 206
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I + ++H NV++ G E I L E G L D
Sbjct: 37 VKIVD--MKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 95 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 143
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 64/158 (40%), Gaps = 15/158 (9%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIA--ME 171
Q H NV+ L G + +++ E E G+L L+++ + L+ IA M+
Sbjct: 90 QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE---GETYIDD-GV 227
Y+H RDL + ILV+ V K+ +F LS + + TY G
Sbjct: 150 YLADMNYVH---------RDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 200
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
K APE + DV+S+G S GE
Sbjct: 201 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 238
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 34.7 bits (78), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 79 CQGVL--PDRTISVVKFID-GSVFDA-YDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV 134
CQ + D I V K +D GS+ +A + + ++ H N++R ++
Sbjct: 22 CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT 81
Query: 135 L--VFESAEYGNLHDLLKRSYQSHS---EPLLLKHRLKIAMEIANVFAYLHIGFSRPIVF 189
L V E E G+L ++ + + E +L+ ++ + + G + ++
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT--VLH 139
Query: 190 RDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCD 249
RDLK + + + + KL +F L A I +T GT ++PE NEK D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGL-ARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSD 198
Query: 250 VYSFG 254
++S G
Sbjct: 199 IWSLG 203
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 90 VVKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLH 146
VK +D + A DC N I ++H NV++ G E I L E G L
Sbjct: 35 AVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 92
Query: 147 DLLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERY 203
D ++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 93 DRIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERD 141
Query: 204 VPKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 167 KIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP---KLFNFSLSASIPEGETYI 223
+I ++ + Y H IV RDLK +L+ + ++ +F LS E
Sbjct: 130 RIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKX 185
Query: 224 DDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
D + GT+ +APE Y +EKCDV+S G
Sbjct: 186 KDKI-GTAYYIAPEVLHGTY-DEKCDVWSTG 214
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 117 HNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRSYQSHSEPLLLKHRLKIAMEIANV 175
H N++ L + + LV E G L D +L++ + S E + H I
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT------IGKT 133
Query: 176 FAYLHIGFSRPIVFRDLKSSYIL-VSERYVP---KLFNFSLSASIPEGETYIDDGVKGTS 231
YLH S+ +V RDLK S IL V E P ++ +F + + E + T+
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTA 189
Query: 232 GIVAPE-YARTGYLNEKCDVYSFG 254
VAPE R GY +E CD++S G
Sbjct: 190 NFVAPEVLKRQGY-DEGCDIWSLG 212
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGT 230
+I + +LH R I++RDLK +L+ + ++ + L+ + G+T G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGT 352
Query: 231 SGIVAPE 237
G +APE
Sbjct: 353 PGFMAPE 359
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGT 230
+I + +LH R I++RDLK +L+ + ++ + L+ + G+T G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGT 352
Query: 231 SGIVAPE 237
G +APE
Sbjct: 353 PGFMAPE 359
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGT 230
+I + +LH R I++RDLK +L+ + ++ + L+ + G+T G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGT 352
Query: 231 SGIVAPE 237
G +APE
Sbjct: 353 PGFMAPE 359
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGT 230
+I + +LH R I++RDLK +L+ + ++ + L+ + G+T G GT
Sbjct: 297 QIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT-KGYAGT 352
Query: 231 SGIVAPE 237
G +APE
Sbjct: 353 PGFMAPE 359
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 90 VVKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLH 146
VK +D + A DC N I ++H NV++ G E I L E G L
Sbjct: 36 AVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 147 DLLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERY 203
D ++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 DRIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERD 142
Query: 204 VPKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 90 VVKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLH 146
VK +D + A DC N I ++H NV++ G E I L E G L
Sbjct: 34 AVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 91
Query: 147 DLLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERY 203
D ++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 92 DRIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERD 140
Query: 204 VPKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 141 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 193
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 90 VVKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLH 146
VK +D + A DC N I ++H NV++ G E I L E G L
Sbjct: 36 AVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 147 DLLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERY 203
D ++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 DRIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERD 142
Query: 204 VPKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 90 VVKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLH 146
VK +D + A DC N I ++H NV++ G E I L E G L
Sbjct: 36 AVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 147 DLLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERY 203
D ++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 DRIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERD 142
Query: 204 VPKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 34.3 bits (77), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 74/173 (42%), Gaps = 21/173 (12%)
Query: 90 VVKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLH 146
VK +D + A DC N I ++H NV++ G E I L E G L
Sbjct: 36 AVKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELF 93
Query: 147 DLLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERY 203
D ++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 DRIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERD 142
Query: 204 VPKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.3 bits (77), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 37 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 95 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 143
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 117 HNNVLRLIGCCLEVEIPVLVFESAEYGNLHD-LLKRSYQSHSEPLLLKHRLKIAMEIANV 175
H N++ L + + LV E G L D +L++ + S E + H I
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLH------TIGKT 133
Query: 176 FAYLHIGFSRPIVFRDLKSSYIL-VSERYVP---KLFNFSLSASIPEGETYIDDGVKGTS 231
YLH S+ +V RDLK S IL V E P ++ +F + + E + T+
Sbjct: 134 VEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMTPCYTA 189
Query: 232 GIVAPE-YARTGYLNEKCDVYSFG 254
VAPE R GY +E CD++S G
Sbjct: 190 NFVAPEVLKRQGY-DEGCDIWSLG 212
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 100 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 152
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 153 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 37 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 95 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 143
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 195
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L + YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQLMAGV------VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 74/172 (43%), Gaps = 21/172 (12%)
Query: 91 VKFIDGSVFDAYDCCFN---NIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHD 147
VK +D + A DC N I ++H NV++ G E I L E G L D
Sbjct: 36 VKIVD--MKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 148 LLKRSYQSHSEPLLLK--HRLKIAMEIANVFAYLH-IGFSRPIVFRDLKSSYILVSERYV 204
++ EP + H+L +A V YLH IG I RD+K +L+ ER
Sbjct: 94 RIEPDI-GMPEPDAQRFFHQL-----MAGV-VYLHGIG----ITHRDIKPENLLLDERDN 142
Query: 205 PKLFNFSLSASIP-EGETYIDDGVKGTSGIVAPE-YARTGYLNEKCDVYSFG 254
K+ +F L+ + + + GT VAPE R + E DV+S G
Sbjct: 143 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCG 194
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
I S + H N+LR+ + + L+ E A G L+ L Q H + R
Sbjct: 66 IEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGR--FDEQRSAT 119
Query: 169 AME-IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV 227
ME +A+ Y H R ++ RD+K +L+ + K+ +F S P + +
Sbjct: 120 FMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXM 173
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE +EK D++ G
Sbjct: 174 CGTLDYLPPEMIEGKTHDEKVDLWCAG 200
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 79 CQGVL--PDRTISVVKFID-GSVFDA-YDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV 134
CQ + D I V K +D GS+ +A + + ++ H N++R ++
Sbjct: 22 CQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTT 81
Query: 135 L--VFESAEYGNLHDLLKRSYQSHS---EPLLLKHRLKIAMEIANVFAYLHIGFSRPIVF 189
L V E E G+L ++ + + E +L+ ++ + + G + ++
Sbjct: 82 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHT--VLH 139
Query: 190 RDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCD 249
RDLK + + + + KL +F L A I +T GT ++PE NEK D
Sbjct: 140 RDLKPANVFLDGKQNVKLGDFGL-ARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSD 198
Query: 250 VYSFG 254
++S G
Sbjct: 199 IWSLG 203
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
E+A +LH S I++RDLK IL+ E KL +F LS + ID K
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS------KESIDHEKKAY 184
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE + D +SFG
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFG 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I S + H N+LR+ + + L+ E A G L+ L Q H + R
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL----QKHGR--FDEQRS 116
Query: 167 KIAME-IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD 225
ME +A+ Y H R ++ RD+K +L+ + K+ +F S P +
Sbjct: 117 ATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRR 170
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ GT + PE +EK D++ G
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEKVDLWCAG 199
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
E+A +LH S I++RDLK IL+ E KL +F LS + ID K
Sbjct: 135 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS------KESIDHEKKAY 185
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE + D +SFG
Sbjct: 186 SFCGTVEYMAPEVVNRRGHTQSADWWSFG 214
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 13/149 (8%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRL 166
I S + H N+LR+ + + L+ E A G L+ + Q H + R
Sbjct: 63 REIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELY----KELQKHGR--FDEQRS 116
Query: 167 KIAME-IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD 225
ME +A+ Y H R ++ RD+K +L+ + K+ +F S P +
Sbjct: 117 ATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRR 170
Query: 226 GVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ GT + PE +EK D++ G
Sbjct: 171 XMCGTLDYLPPEMIEGKTHDEKVDLWCAG 199
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 108 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 160
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 161 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 217
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 63/151 (41%), Gaps = 12/151 (7%)
Query: 106 FNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR 165
I Q+ H N++ L+ LVFE ++ LH+L + YQ L+K
Sbjct: 50 LREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDR--YQRGVPEHLVKSI 107
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD 225
++ N F + H + RD+K IL+++ V KL +F + + Y DD
Sbjct: 108 TWQTLQAVN-FCHKH-----NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD 161
Query: 226 GVKGTSGIVAPEY--ARTGYLNEKCDVYSFG 254
V T +PE T Y DV++ G
Sbjct: 162 EV-ATRWYRSPELLVGDTQY-GPPVDVWAIG 190
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
A EI +LH S+ IV+RDLK IL+ + K+ +F + G+ +
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFC- 179
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE N D +SFG
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFG 205
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
E+A +LH S I++RDLK IL+ E KL +F LS + ID K
Sbjct: 134 ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLS------KESIDHEKKAY 184
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE + D +SFG
Sbjct: 185 SFCGTVEYMAPEVVNRRGHTQSADWWSFG 213
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 133
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 133
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
I + + H N+LRL + L+ E A G L+ L++S + I
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQ-----RTATI 128
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
E+A+ Y H + ++ RD+K +L+ + K+ +F S P + +
Sbjct: 129 MEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMC 182
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT + PE NEK D++ G
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIG 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVF-ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIA--M 170
Q H N++RL G +PV++ E E G L L+ + + L+ IA M
Sbjct: 71 QFEHPNIIRLEGVVTN-SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 129
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TYIDD-G 226
+Y+H RDL + ILV+ V K+ +F LS + E TY G
Sbjct: 130 RYLAEMSYVH---------RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
K APE D +S+G S GE
Sbjct: 181 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 219
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 133
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 133
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 14/100 (14%)
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGET---- 221
L I ++IA +LH S+ ++ RDLK S I + V K+ +F L ++ + E
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 222 -------YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
G GT ++PE + K D++S G
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLG 263
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL-SASIPEGETYIDDGVKG 229
EI+ +LH + I++RDLK I+++ + KL +F L SI +G + G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCG 183
Query: 230 TSGIVAPE-YARTGYLNEKCDVYSFG 254
T +APE R+G+ N D +S G
Sbjct: 184 TIEYMAPEILMRSGH-NRAVDWWSLG 208
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + ++ + IA + ++ I+ RD+K
Sbjct: 143 ICMEHMDGGSLDQVLKKAGR-------IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKP 195
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 196 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 252
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE---TY 222
L I ++IA +LH S+ ++ RDLK S I + V K+ +F L ++ + E T
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 223 IDD--------GVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
+ G GT ++PE + K D++S G
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLG 217
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 58/120 (48%), Gaps = 10/120 (8%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 81 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 133
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
S ILV+ R KL +F +S + + + + GT ++PE + + + + D++S G
Sbjct: 134 SNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL-SASIPEGETYIDDGVKG 229
EI+ +LH + I++RDLK I+++ + KL +F L SI +G + G
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCG 183
Query: 230 TSGIVAPE-YARTGYLNEKCDVYSFG 254
T +APE R+G+ N D +S G
Sbjct: 184 TIEYMAPEILMRSGH-NRAVDWWSLG 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 16/123 (13%)
Query: 135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKS 194
+ E + G+L +LK++ + + L K+++ + YL I+ RD+K
Sbjct: 84 ICMEHMDGGSLDQVLKKAGRIPEQILG-----KVSIAVIKGLTYLR--EKHKIMHRDVKP 136
Query: 195 SYILVSERYVPKLFNFSLSASIPEGETYIDDGVK---GTSGIVAPEYARTGYLNEKCDVY 251
S ILV+ R KL +F +S + ID+ GT ++PE + + + + D++
Sbjct: 137 SNILVNSRGEIKLCDFGVSGQL------IDEMANEFVGTRSYMSPERLQGTHYSVQSDIW 190
Query: 252 SFG 254
S G
Sbjct: 191 SMG 193
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 25/128 (19%)
Query: 85 DRTISVVKFIDGSVFDAYDC---CFNNIVFASQMSHNNVLRLIGCCLEVEI--PVLVFES 139
D + V+K D S + D C +F SH NVL ++G C P L+
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIF----SHPNVLPVLGACQSPPAPHPTLITHW 90
Query: 140 AEYGNLHDLLKRSY-----QSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD-LK 193
YG+L+++L QS + +K A+++A A+LH P++ R L
Sbjct: 91 MPYGSLYNVLHEGTNFVVDQSQA--------VKFALDMARGMAFLHT--LEPLIPRHALN 140
Query: 194 SSYILVSE 201
S +++ E
Sbjct: 141 SRSVMIDE 148
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
A EI ++H +R +V+RDLK + IL+ E ++ + L+ + + +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASV 351
Query: 229 GTSGIVAPEYARTGYL-NEKCDVYSFG 254
GT G +APE + G + D +S G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLG 378
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
A EI ++H +R +V+RDLK + IL+ E ++ + L+ + + +
Sbjct: 297 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASV 350
Query: 229 GTSGIVAPEYARTGYL-NEKCDVYSFG 254
GT G +APE + G + D +S G
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLG 377
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
A EI ++H +R +V+RDLK + IL+ E ++ + L+ + + +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASV 351
Query: 229 GTSGIVAPEYARTGYL-NEKCDVYSFG 254
GT G +APE + G + D +S G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLG 378
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 7/87 (8%)
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
A EI ++H +R +V+RDLK + IL+ E ++ + L+ + + +
Sbjct: 298 AAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH---ASV 351
Query: 229 GTSGIVAPEYARTGYL-NEKCDVYSFG 254
GT G +APE + G + D +S G
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLG 378
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 32.0 bits (71), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVF-ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIA--M 170
Q H N++RL G +PV++ E E G L L+ + + L+ IA M
Sbjct: 73 QFEHPNIIRLEGVVTN-SMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGM 131
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDD----G 226
+Y+H RDL + ILV+ V K+ +F LS + E + + G
Sbjct: 132 RYLAEMSYVH---------RDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLG 182
Query: 227 VKGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
K APE D +S+G S GE
Sbjct: 183 GKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGE 221
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q S++ L + C + E +F EY N DL+ + P +H + EI+
Sbjct: 76 QASNHPFLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPE--EHARFYSAEIS 131
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL-SASIPEGETYIDDGVKGTSG 232
YLH R I++RDLK +L+ KL ++ + + G+T GT
Sbjct: 132 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPN 186
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE R D ++ G
Sbjct: 187 YIAPEILRGEDYGFSVDWWALG 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q S++ L + C + E +F EY N DL+ + P +H + EI+
Sbjct: 65 QASNHPFLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPE--EHARFYSAEIS 120
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL-SASIPEGETYIDDGVKGTSG 232
YLH R I++RDLK +L+ KL ++ + + G+T GT
Sbjct: 121 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPN 175
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE R D ++ G
Sbjct: 176 YIAPEILRGEDYGFSVDWWALG 197
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q S++ L + C + E +F EY N DL+ + P +H + EI+
Sbjct: 108 QASNHPFLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPE--EHARFYSAEIS 163
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL-SASIPEGETYIDDGVKGTSG 232
YLH R I++RDLK +L+ KL ++ + + G+T GT
Sbjct: 164 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--STFCGTPN 218
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE R D ++ G
Sbjct: 219 YIAPEILRGEDYGFSVDWWALG 240
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 10/142 (7%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIA 173
Q S++ L + C + E +F EY N DL+ + P +H + EI+
Sbjct: 61 QASNHPFLVGLHSCFQTE--SRLFFVIEYVNGGDLMFHMQRQRKLPE--EHARFYSAEIS 116
Query: 174 NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL-SASIPEGETYIDDGVKGTSG 232
YLH R I++RDLK +L+ KL ++ + + G+T GT
Sbjct: 117 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT--SXFCGTPN 171
Query: 233 IVAPEYARTGYLNEKCDVYSFG 254
+APE R D ++ G
Sbjct: 172 YIAPEILRGEDYGFSVDWWALG 193
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 31.6 bits (70), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 63/158 (39%), Gaps = 15/158 (9%)
Query: 114 QMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIA--ME 171
Q H NV+ L G + +++ E E G+L L+++ + L+ IA M+
Sbjct: 64 QFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE---GETYIDD-GV 227
Y+H R L + ILV+ V K+ +F LS + + TY G
Sbjct: 124 YLADMNYVH---------RALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGG 174
Query: 228 KGTSGIVAPEYARTGYLNEKCDVYSFGXXXXXXXSTGE 265
K APE + DV+S+G S GE
Sbjct: 175 KIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGE 212
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 49/123 (39%), Gaps = 23/123 (18%)
Query: 166 LKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS-----ERYVPKLFNFSLSASIPEGE 220
+ + + + A+LH S IV RDLK IL+S + + +F L + G
Sbjct: 121 ITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 221 TYID--DGVKGTSGIVAPEYARTGYLNEKC--------DVYSFGXXXXXXXSTGEDLFNM 270
GV GT G +APE L+E C D++S G S G F
Sbjct: 178 HSFSRRSGVPGTEGWIAPE-----MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK 232
Query: 271 GLR 273
L+
Sbjct: 233 SLQ 235
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 20/161 (12%)
Query: 100 DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEP 159
D +C S ++ L + CC + P +F E+ N DL+ +S
Sbjct: 65 DDVECTMTEKRILSLARNHPFLTQLFCCFQT--PDRLFFVMEFVNGGDLMFHIQKSRR-- 120
Query: 160 LLLKHRLKI-AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE 218
+ R + A EI + +LH + I++RDLK +L+ KL +F + E
Sbjct: 121 -FDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---E 173
Query: 219 GETYIDDGVK-----GTSGIVAPEYARTGYLNEKCDVYSFG 254
G I +GV GT +APE + D ++ G
Sbjct: 174 G---ICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMG 211
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
E+A +LH S I++RDLK IL+ E KL +F LS ID K
Sbjct: 138 ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKEA------IDHEKKAY 188
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE + D +S+G
Sbjct: 189 SFCGTVEYMAPEVVNRQGHSHSADWWSYG 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
EI + YLH SR +V+RD+K +++ + K+ +F L EG I DG
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EG---ISDGATMK 163
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE D + G
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
EI + YLH SR +V+RD+K +++ + K+ +F L EG I DG
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EG---ISDGATMK 168
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE D + G
Sbjct: 169 XFCGTPEYLAPEVLEDNDYGRAVDWWGLG 197
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 22/106 (20%)
Query: 85 DRTISVVKFIDGSVFDAYDC---CFNNIVFASQMSHNNVLRLIGCCLEVEI--PVLVFES 139
D + V+K D S + D C +F SH NVL ++G C P L+
Sbjct: 35 DIVVKVLKVRDWSTRKSRDFNEECPRLRIF----SHPNVLPVLGACQSPPAPHPTLITHW 90
Query: 140 AEYGNLHDLLKRSY-----QSHSEPLLLKHRLKIAMEIANVFAYLH 180
YG+L+++L QS + +K A++ A A+LH
Sbjct: 91 XPYGSLYNVLHEGTNFVVDQSQA--------VKFALDXARGXAFLH 128
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 20/121 (16%)
Query: 141 EYGNLHDLLKRSYQ--SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYIL 198
EY N DL+ Q EP H + A EIA +L S+ I++RDLK ++
Sbjct: 101 EYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVM 153
Query: 199 VSERYVPKLFNFSLSASIPEGETYIDDGVK-----GTSGIVAPEYARTGYLNEKCDVYSF 253
+ K+ +F + + I DGV GT +APE + D ++F
Sbjct: 154 LDSEGHIKIADFGMC------KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 207
Query: 254 G 254
G
Sbjct: 208 G 208
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
EI + YLH SR +V+RD+K +++ + K+ +F L EG I DG
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EG---ISDGATMK 163
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE D + G
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
EI + YLH SR +V+RD+K +++ + K+ +F L EG I DG
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EG---ISDGATMK 163
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE D + G
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
EI + YLH SR +V+RD+K +++ + K+ +F L EG I DG
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EG---ISDGATMK 163
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE D + G
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
EI + YLH SR +V+RD+K +++ + K+ +F L EG I DG
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EG---ISDGATMK 166
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE D + G
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLG 195
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 171 EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK-- 228
EI + YLH SR +V+RD+K +++ + K+ +F L EG I DG
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EG---ISDGATMK 163
Query: 229 ---GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT +APE D + G
Sbjct: 164 XFCGTPEYLAPEVLEDNDYGRAVDWWGLG 192
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 20/121 (16%)
Query: 141 EYGNLHDLLKRSYQ--SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYIL 198
EY N DL+ Q EP H + A EIA +L S+ I++RDLK ++
Sbjct: 422 EYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVM 474
Query: 199 VSERYVPKLFNFSLSASIPEGETYIDDGVK-----GTSGIVAPEYARTGYLNEKCDVYSF 253
+ K+ +F + + I DGV GT +APE + D ++F
Sbjct: 475 LDSEGHIKIADFGMC------KENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAF 528
Query: 254 G 254
G
Sbjct: 529 G 529
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 117 HNNVLRLIGCCL------EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL-LLKHRLKIA 169
H NV+RL+ C E+++ LVFE + DL R+Y + P L +K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKV-TLVFEHVD----QDL--RTYLDKAPPPGLPAETIKDL 117
Query: 170 M-EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
M + +LH IV RDLK ILV+ KL +F L A I + +D V
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGL-ARIYSYQMALDP-VV 172
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
T APE D++S G
Sbjct: 173 VTLWYRAPEVLLQSTYATPVDMWSVG 198
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 10/92 (10%)
Query: 168 IAMEIANVFAYLHIGFSRPIVFRDLKSSYIL-VSERYVP---KLFNFSLSASIPEGETYI 223
+ I YLH ++ +V RDLK S IL V E P ++ +F + + E +
Sbjct: 121 VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGL 176
Query: 224 DDGVKGTSGIVAPEY-ARTGYLNEKCDVYSFG 254
T+ VAPE R GY + CD++S G
Sbjct: 177 LXTPCYTANFVAPEVLERQGY-DAACDIWSLG 207
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 17/153 (11%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
I + H N+++ +G E + E G+L LL+ + L + I
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-----LKDNEQTI 124
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE-RYVPKLFNFSLSASI----PEGETYI 223
+ L IV RD+K +L++ V K+ +F S + P ET+
Sbjct: 125 GFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT 184
Query: 224 DDGVKGTSGIVAPEYARTGY--LNEKCDVYSFG 254
GT +APE G + D++S G
Sbjct: 185 -----GTLQYMAPEIIDKGPRGYGKAADIWSLG 212
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 29.3 bits (64), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 7/146 (4%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
+ + M H N+++ E +V + E G DL KR L
Sbjct: 74 VAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG---DLFKRINAQKGVLFQEDQILDW 130
Query: 169 AMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVK 228
++I ++H R I+ RD+KS I +++ +L +F + A + +
Sbjct: 131 FVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGI-ARVLNSTVELARACI 186
Query: 229 GTSGIVAPEYARTGYLNEKCDVYSFG 254
GT ++PE N K D+++ G
Sbjct: 187 GTPYYLSPEICENKPYNNKSDIWALG 212
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Query: 187 IVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTG-YLN 245
+V RDLK +L+ K+ +F LS + +GE D G+ APE Y
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC--GSPNYAAPEVISGRLYAG 189
Query: 246 EKCDVYSFG 254
+ D++S G
Sbjct: 190 PEVDIWSCG 198
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 57/151 (37%), Gaps = 13/151 (8%)
Query: 107 NNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLL--KRSYQSHSEPLLLKH 164
N I ++ H N++ L LV + G L D + K Y L++
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR- 127
Query: 165 RLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV-SERYVPKLFNFSLSASIPEGETYI 223
++ + YLH IV RDLK +L S+ K+ S EG+ +
Sbjct: 128 ------QVLDAVYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV 178
Query: 224 DDGVKGTSGIVAPEYARTGYLNEKCDVYSFG 254
GT G VAPE ++ D +S G
Sbjct: 179 MSTACGTPGYVAPEVLAQKPYSKAVDCWSIG 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 18/105 (17%)
Query: 117 HNNVLRLIGCCL------EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL-LLKHRLKIA 169
H NV+RL+ C E+++ LVFE + DL R+Y + P L +K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKV-TLVFEHVD----QDL--RTYLDKAPPPGLPAETIKDL 117
Query: 170 M-EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS 213
M + +LH IV RDLK ILV+ KL +F L+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 18/105 (17%)
Query: 117 HNNVLRLIGCCL------EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL-LLKHRLKIA 169
H NV+RL+ C E+++ LVFE + DL R+Y + P L +K
Sbjct: 73 HPNVVRLMDVCATSRTDREIKV-TLVFEHVD----QDL--RTYLDKAPPPGLPAETIKDL 125
Query: 170 M-EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS 213
M + +LH IV RDLK ILV+ KL +F L+
Sbjct: 126 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 23/156 (14%)
Query: 109 IVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKI 168
I + H N+++ +G E + E G+L LL+ + L + I
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP-----LKDNEQTI 110
Query: 169 AM---EIANVFAYLHIGFSRPIVFRDLKSSYILVSE-RYVPKLFNFSLSASI----PEGE 220
+I YLH IV RD+K +L++ V K+ +F S + P E
Sbjct: 111 GFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTE 167
Query: 221 TYIDDGVKGTSGIVAPEYARTGY--LNEKCDVYSFG 254
T+ GT +APE G + D++S G
Sbjct: 168 TFT-----GTLQYMAPEIIDKGPRGYGKAADIWSLG 198
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 48/105 (45%), Gaps = 18/105 (17%)
Query: 117 HNNVLRLIGCCL------EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPL-LLKHRLKIA 169
H NV+RL+ C E+++ LVFE + DL R+Y + P L +K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKV-TLVFEHVD----QDL--RTYLDKAPPPGLPAETIKDL 117
Query: 170 M-EIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS 213
M + +LH IV RDLK ILV+ KL +F L+
Sbjct: 118 MRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 172 IANVFAYLHIGFSRPIVFRDLKSSYIL-VSERYVP---KLFNFSLSASIPEGETYIDDGV 227
I YLH ++ +V RDLK S IL V E P ++ +F + + E +
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMTP 180
Query: 228 KGTSGIVAPEY-ARTGYLNEKCDVYSFG 254
T+ VAPE R GY + CD++S G
Sbjct: 181 CYTANFVAPEVLERQGY-DAACDIWSLG 207
>pdb|3AL0|C Chain C, Crystal Structure Of The Glutamine Transamidosome From
Thermotoga Maritima In The Glutamylation State
Length = 592
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 11 FMCNSKNREKADRKAFLMRNGKMFLERLISSCNGNYNPIRSFSAKELERATNNYHYRNII 70
FM + EK + FL R ER++ + + S++ +E+E+ + + +
Sbjct: 488 FMNDDYEYEKDYVEKFLKREEA---ERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLA 544
Query: 71 TESSIFRLCQGVLPDRTIS 89
++ +F+L +G + + ++
Sbjct: 545 SKKVVFQLIRGAVTGKLVT 563
>pdb|3AKZ|B Chain B, Crystal Structure Of Thermotoga Maritima Nondiscriminating
Glutamyl- Trna Synthetase In Complex With Trnagln And A
Glutamyl-Amp Analog
pdb|3AKZ|D Chain D, Crystal Structure Of Thermotoga Maritima Nondiscriminating
Glutamyl- Trna Synthetase In Complex With Trnagln And A
Glutamyl-Amp Analog
pdb|3AKZ|C Chain C, Crystal Structure Of Thermotoga Maritima Nondiscriminating
Glutamyl- Trna Synthetase In Complex With Trnagln And A
Glutamyl-Amp Analog
pdb|3AKZ|A Chain A, Crystal Structure Of Thermotoga Maritima Nondiscriminating
Glutamyl- Trna Synthetase In Complex With Trnagln And A
Glutamyl-Amp Analog
Length = 487
Score = 28.5 bits (62), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 11 FMCNSKNREKADRKAFLMRNGKMFLERLISSCNGNYNPIRSFSAKELERATNNYHYRNII 70
FM + EK + FL R ER++ + + S++ +E+E+ + + +
Sbjct: 383 FMNDDYEYEKDYVEKFLKREEA---ERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLA 439
Query: 71 TESSIFRLCQGVLPDRTIS 89
++ +F+L +G + + ++
Sbjct: 440 SKKVVFQLIRGAVTGKLVT 458
>pdb|3AFH|A Chain A, Crystal Structure Of Thermotoga Maritima Nondiscriminating
Glutamyl- Trna Synthetase In Complex With A Glutamyl-Amp
Analog
Length = 488
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/79 (18%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 11 FMCNSKNREKADRKAFLMRNGKMFLERLISSCNGNYNPIRSFSAKELERATNNYHYRNII 70
FM + EK + FL R ER++ + + S++ +E+E+ + + +
Sbjct: 384 FMNDDYEYEKDYVEKFLKREEA---ERVLEEAKKAFKDLNSWNMEEIEKTLRDLSEKGLA 440
Query: 71 TESSIFRLCQGVLPDRTIS 89
++ +F+L +G + + ++
Sbjct: 441 SKKVVFQLIRGAVTGKLVT 459
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 27.7 bits (60), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 143 GNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER 202
G L + LK+ PL LKI + ++H PI+ RDLK +L+S +
Sbjct: 118 GQLVEFLKK--MESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQ 174
Query: 203 YVPKLFNFSLSASI 216
KL +F + +I
Sbjct: 175 GTIKLCDFGSATTI 188
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,840,223
Number of Sequences: 62578
Number of extensions: 402936
Number of successful extensions: 1592
Number of sequences better than 100.0: 505
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 372
Number of HSP's that attempted gapping in prelim test: 1202
Number of HSP's gapped (non-prelim): 539
length of query: 347
length of database: 14,973,337
effective HSP length: 100
effective length of query: 247
effective length of database: 8,715,537
effective search space: 2152737639
effective search space used: 2152737639
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)