Query         045067
Match_columns 347
No_of_seqs    244 out of 2268
Neff          9.9 
Searched_HMMs 29240
Date          Mon Mar 25 16:41:33 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045067.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045067hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 4asz_A BDNF/NT-3 growth factor 100.0 4.5E-60 1.5E-64  420.8  18.4  263   62-346    13-290 (299)
  2 4aoj_A High affinity nerve gro 100.0 2.6E-59 8.8E-64  421.4  21.8  263   62-346    41-320 (329)
  3 3omv_A RAF proto-oncogene seri 100.0 7.9E-59 2.7E-63  413.0  22.8  264   60-347    34-302 (307)
  4 4gt4_A Tyrosine-protein kinase 100.0 1.9E-59 6.5E-64  418.5  18.0  259   63-343    27-304 (308)
  5 4fih_A Serine/threonine-protei 100.0   5E-59 1.7E-63  419.4  16.1  249   62-338    74-323 (346)
  6 4g3f_A NF-kappa-beta-inducing  100.0 1.2E-58 4.2E-63  415.7  16.3  255   61-346    57-317 (336)
  7 4b9d_A Serine/threonine-protei 100.0 2.5E-58 8.6E-63  415.5  16.1  250   62-338    24-276 (350)
  8 3hmm_A TGF-beta receptor type- 100.0 4.8E-58 1.6E-62  409.9  16.7  272   62-346     3-298 (303)
  9 4ase_A Vascular endothelial gr 100.0   1E-57 3.5E-62  414.2  18.5  274   52-346    54-348 (353)
 10 3fpq_A Serine/threonine-protei 100.0 1.5E-57 5.3E-62  401.8  19.0  244   65-338    29-282 (290)
 11 4fie_A Serine/threonine-protei 100.0 1.2E-57 4.1E-62  420.2  17.9  249   62-338   151-400 (423)
 12 4aw0_A HPDK1, 3-phosphoinositi 100.0 6.8E-58 2.3E-62  406.2  14.7  248   61-337    31-283 (311)
 13 3hyh_A Carbon catabolite-derep 100.0 1.7E-56 5.9E-61  391.9  19.2  245   62-338    13-262 (275)
 14 4g31_A Eukaryotic translation  100.0 2.7E-55 9.1E-60  390.6  20.8  250   62-338     5-279 (299)
 15 3ubd_A Ribosomal protein S6 ki 100.0 1.6E-56 5.5E-61  397.3  11.8  247   62-338    24-281 (304)
 16 4b99_A Mitogen-activated prote 100.0 1.6E-51 5.5E-56  379.7  22.7  259   62-338    54-344 (398)
 17 4f9c_A Cell division cycle 7-r 100.0 1.8E-51   6E-56  375.5  21.3  198   58-270    17-249 (361)
 18 3uim_A Brassinosteroid insensi 100.0 1.4E-51 4.6E-56  372.8  19.6  291   46-342    14-308 (326)
 19 2qkw_B Protein kinase; three-h 100.0 1.7E-50 5.8E-55  365.0  21.1  287   51-345    28-315 (321)
 20 3uto_A Twitchin; kinase, muscl 100.0 1.2E-50 4.2E-55  391.0  20.6  252   61-338   156-410 (573)
 21 3v5w_A G-protein coupled recep 100.0 1.7E-50 5.8E-55  388.9  20.2  249   61-338   188-449 (689)
 22 3s95_A LIMK-1, LIM domain kina 100.0 8.2E-49 2.8E-53  352.2  23.6  261   61-346     9-283 (310)
 23 2nru_A Interleukin-1 receptor- 100.0   4E-48 1.4E-52  347.1  27.6  287   47-346    10-307 (307)
 24 3soc_A Activin receptor type-2 100.0 1.8E-48 6.1E-53  351.9  20.1  270   60-346    22-319 (322)
 25 3fxz_A Serine/threonine-protei 100.0 1.1E-48 3.6E-53  349.4  18.2  250   61-338    19-269 (297)
 26 3p86_A Serine/threonine-protei 100.0   7E-48 2.4E-52  346.0  23.2  268   54-346    29-299 (309)
 27 3zgw_A Maternal embryonic leuc 100.0 1.7E-48 5.7E-53  354.9  18.7  250   60-338     8-260 (347)
 28 4hcu_A Tyrosine-protein kinase 100.0 4.5E-48 1.5E-52  340.3  18.5  258   61-346     9-267 (269)
 29 3kul_A Ephrin type-A receptor  100.0 1.2E-47 3.9E-52  347.0  21.4  260   61-346    48-314 (325)
 30 3cbl_A C-FES, proto-oncogene t 100.0 2.4E-48 8.3E-53  358.5  16.9  266   56-347   108-376 (377)
 31 2c30_A Serine/threonine-protei 100.0 9.5E-48 3.3E-52  347.0  19.9  261   50-338    23-294 (321)
 32 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-47 3.9E-52  337.5  19.2  259   61-346     7-265 (268)
 33 3fe3_A MAP/microtubule affinit 100.0 1.2E-47   4E-52  347.1  19.0  248   60-338    13-264 (328)
 34 2psq_A Fibroblast growth facto 100.0 2.9E-47 9.9E-52  350.3  21.9  263   61-345    80-364 (370)
 35 3ugc_A Tyrosine-protein kinase 100.0 1.8E-47   6E-52  341.1  19.0  269   61-347     9-293 (295)
 36 4eqm_A Protein kinase; transfe 100.0 2.7E-47 9.1E-52  339.9  19.1  260   61-344    10-274 (294)
 37 3lb7_A RAF proto-oncogene seri 100.0 2.3E-46 7.7E-51  335.9  25.0  264   60-347    34-302 (307)
 38 2qol_A Ephrin receptor; recept 100.0   3E-47   1E-51  350.5  19.7  260   61-346    44-310 (373)
 39 1mp8_A Focal adhesion kinase 1 100.0 2.5E-47 8.6E-52  337.8  18.2  261   59-346    12-277 (281)
 40 3vhe_A Vascular endothelial gr 100.0 1.8E-47 6.1E-52  350.3  17.8  275   51-346    11-356 (359)
 41 3q4u_A Activin receptor type-1 100.0 7.3E-47 2.5E-51  337.7  21.1  265   60-343     6-300 (301)
 42 1tki_A Titin; serine kinase, m 100.0 5.4E-47 1.8E-51  342.0  20.3  251   61-338     4-257 (321)
 43 2yab_A Death-associated protei 100.0 8.1E-47 2.8E-51  345.7  21.7  252   60-338    10-272 (361)
 44 3gen_A Tyrosine-protein kinase 100.0 7.7E-47 2.6E-51  334.8  20.1  262   58-346    20-281 (283)
 45 4dc2_A Protein kinase C IOTA t 100.0 6.4E-47 2.2E-51  349.7  20.2  252   61-333    51-307 (396)
 46 1o6l_A RAC-beta serine/threoni 100.0 1.1E-46 3.6E-51  341.9  20.6  248   61-338     4-260 (337)
 47 3soa_A Calcium/calmodulin-depe 100.0 2.8E-46 9.7E-51  350.8  23.1  254   59-338     8-267 (444)
 48 1qcf_A Haematopoetic cell kina 100.0 9.9E-48 3.4E-52  362.8  13.3  266   53-345   179-444 (454)
 49 3mdy_A Bone morphogenetic prot 100.0 1.2E-45 4.3E-50  335.0  26.5  273   52-346    27-332 (337)
 50 1csn_A Casein kinase-1; phosph 100.0 3.9E-46 1.3E-50  332.5  22.7  263   61-346     9-284 (298)
 51 4aw2_A Serine/threonine-protei 100.0 1.7E-47 5.7E-52  358.0  14.5  263   53-338    65-338 (437)
 52 1opk_A P150, C-ABL, proto-onco 100.0 4.1E-47 1.4E-51  362.0  17.3  264   56-345   214-478 (495)
 53 1k9a_A Carboxyl-terminal SRC k 100.0 2.3E-46 7.8E-51  353.0  22.1  255   60-346   191-446 (450)
 54 2y0a_A Death-associated protei 100.0 2.5E-46 8.7E-51  338.4  21.4  252   60-338     9-271 (326)
 55 3tt0_A Basic fibroblast growth 100.0 4.4E-46 1.5E-50  344.0  23.4  267   58-346    65-353 (382)
 56 1luf_A Muscle-specific tyrosin 100.0 6.5E-47 2.2E-51  344.3  17.5  269   56-346    41-336 (343)
 57 4euu_A Serine/threonine-protei 100.0 7.6E-46 2.6E-50  334.2  24.1  271   61-343     8-307 (319)
 58 3t9t_A Tyrosine-protein kinase 100.0   1E-46 3.6E-51  331.0  18.0  259   61-346     7-265 (267)
 59 3kfa_A Tyrosine-protein kinase 100.0 1.1E-46 3.9E-51  334.5  18.0  264   57-346     8-272 (288)
 60 2ivs_A Proto-oncogene tyrosine 100.0   2E-46 6.9E-51  336.9  19.6  266   59-346    20-312 (314)
 61 1qpc_A LCK kinase; alpha beta  100.0 1.1E-46 3.6E-51  333.2  17.4  264   56-346     7-270 (279)
 62 2bdw_A Hypothetical protein K1 100.0 2.9E-46   1E-50  342.6  20.9  254   59-339    26-285 (362)
 63 3qd2_B Eukaryotic translation  100.0 8.2E-46 2.8E-50  335.2  23.6  252   60-338     4-325 (332)
 64 3tki_A Serine/threonine-protei 100.0 3.3E-47 1.1E-51  343.7  14.0  252   61-338     6-261 (323)
 65 2izr_A Casein kinase I isoform 100.0 3.2E-46 1.1E-50  338.3  20.5  262   61-346     8-282 (330)
 66 3a8x_A Protein kinase C IOTA t 100.0 2.9E-46 9.9E-51  340.3  20.1  251   62-333     9-264 (345)
 67 3kmu_A ILK, integrin-linked ki 100.0   4E-46 1.4E-50  327.7  20.2  254   61-345     9-270 (271)
 68 3poz_A Epidermal growth factor 100.0 8.8E-47   3E-51  341.6  16.4  257   62-345    15-278 (327)
 69 3l9p_A Anaplastic lymphoma kin 100.0 8.1E-47 2.8E-51  347.1  16.4  263   61-345    70-345 (367)
 70 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.9E-47 1.7E-51  357.7  15.2  265   54-345   176-440 (452)
 71 1kob_A Twitchin; kinase, intra 100.0 7.6E-46 2.6E-50  342.2  22.0  253   60-338    49-304 (387)
 72 3txo_A PKC-L, NPKC-ETA, protei 100.0   1E-46 3.5E-51  344.1  15.7  249   60-338    21-280 (353)
 73 3niz_A Rhodanese family protei 100.0 9.1E-46 3.1E-50  332.6  21.5  264   59-338    18-300 (311)
 74 3c0i_A Peripheral plasma membr 100.0 3.6E-46 1.2E-50  340.8  19.1  256   60-338    22-286 (351)
 75 3dtc_A Mitogen-activated prote 100.0 3.9E-46 1.3E-50  328.1  18.6  252   61-343     6-271 (271)
 76 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.2E-46 7.5E-51  339.6  17.3  246   61-338     8-258 (336)
 77 3v8s_A RHO-associated protein  100.0 1.4E-46 4.8E-51  349.2  16.3  258   55-338    62-329 (410)
 78 1fot_A TPK1 delta, CAMP-depend 100.0 5.6E-46 1.9E-50  334.7  19.8  245   61-338     5-258 (318)
 79 3cc6_A Protein tyrosine kinase 100.0 3.4E-46 1.2E-50  330.4  18.0  259   60-345    10-273 (281)
 80 2eva_A TAK1 kinase - TAB1 chim 100.0 8.5E-46 2.9E-50  332.2  20.7  256   62-346     8-264 (307)
 81 1t46_A HOMO sapiens V-KIT hard 100.0 9.1E-46 3.1E-50  332.5  20.9  268   58-346    19-308 (313)
 82 3pls_A Macrophage-stimulating  100.0 1.1E-45 3.6E-50  329.7  21.1  259   63-347    22-289 (298)
 83 4e5w_A Tyrosine-protein kinase 100.0 5.4E-46 1.8E-50  332.4  19.2  266   62-345    21-302 (302)
 84 3f66_A Hepatocyte growth facto 100.0 4.6E-46 1.6E-50  332.3  18.7  261   61-347    24-293 (298)
 85 1rjb_A FL cytokine receptor; k 100.0   4E-46 1.4E-50  339.4  18.5  269   57-346    40-335 (344)
 86 3kex_A Receptor tyrosine-prote 100.0 6.4E-46 2.2E-50  335.6  19.4  257   62-345    13-276 (325)
 87 4fr4_A YANK1, serine/threonine 100.0 5.2E-46 1.8E-50  342.5  19.0  250   61-338    14-271 (384)
 88 2zv2_A Calcium/calmodulin-depe 100.0   1E-45 3.4E-50  330.2  19.9  249   61-338    12-292 (298)
 89 3lxp_A Non-receptor tyrosine-p 100.0 1.6E-45 5.5E-50  332.0  21.4  264   64-347    33-312 (318)
 90 1xjd_A Protein kinase C, theta 100.0 2.3E-46 7.8E-51  340.7  15.6  250   58-337    13-268 (345)
 91 4f0f_A Serine/threonine-protei 100.0   2E-45 6.9E-50  326.4  21.3  253   61-343    18-287 (287)
 92 3op5_A Serine/threonine-protei 100.0 2.9E-46 9.9E-51  343.1  16.2  269   60-346    33-330 (364)
 93 4fvq_A Tyrosine-protein kinase 100.0 4.5E-46 1.5E-50  330.8  16.9  252   61-345     7-275 (289)
 94 3uc3_A Serine/threonine-protei 100.0 1.4E-45 4.8E-50  338.0  20.5  254   60-339    18-275 (361)
 95 3o0g_A Cell division protein k 100.0   2E-45 6.7E-50  327.4  20.9  260   62-338     2-282 (292)
 96 1mqb_A Ephrin type-A receptor  100.0 2.1E-45 7.2E-50  333.4  21.3  259   62-346    44-310 (333)
 97 1u59_A Tyrosine-protein kinase 100.0 2.5E-45 8.5E-50  325.9  21.3  258   62-346     9-273 (287)
 98 3qup_A Tyrosine-protein kinase 100.0   8E-46 2.7E-50  334.5  18.4  267   58-346    19-299 (323)
 99 3c1x_A Hepatocyte growth facto 100.0 3.3E-46 1.1E-50  343.4  15.8  259   63-347    90-357 (373)
100 3g2f_A Bone morphogenetic prot 100.0 2.5E-46 8.6E-51  339.6  14.8  270   61-347    12-320 (336)
101 2x4f_A Myosin light chain kina 100.0 1.2E-45 4.1E-50  339.8  19.5  246   67-338    94-342 (373)
102 3f3z_A Calcium/calmodulin-depe 100.0 2.5E-45 8.4E-50  324.1  20.7  250   60-338     7-261 (277)
103 1rdq_E PKA C-alpha, CAMP-depen 100.0   9E-46 3.1E-50  337.6  18.4  245   61-338    40-293 (350)
104 3og7_A AKAP9-BRAF fusion prote 100.0   2E-45 6.9E-50  326.8  20.2  262   60-345    22-288 (289)
105 2i1m_A Macrophage colony-stimu 100.0 8.4E-46 2.9E-50  335.8  17.9  269   57-346    41-327 (333)
106 4hgt_A Casein kinase I isoform 100.0 2.6E-45 8.9E-50  326.8  20.7  265   59-346     6-281 (296)
107 2vd5_A DMPK protein; serine/th 100.0   7E-47 2.4E-51  351.4  10.9  263   52-338    51-327 (412)
108 2pvf_A Fibroblast growth facto 100.0 2.8E-45 9.5E-50  332.7  21.1  264   60-345    33-318 (334)
109 2pmi_A Negative RE, cyclin-dep 100.0   3E-45   1E-49  330.1  21.1  264   61-338     4-293 (317)
110 3lzb_A Epidermal growth factor 100.0 9.5E-46 3.2E-50  334.8  17.9  258   61-345    14-278 (327)
111 2h34_A Serine/threonine-protei 100.0 2.4E-45 8.2E-50  329.6  20.1  261   59-345    31-296 (309)
112 2xir_A Vascular endothelial gr 100.0 8.7E-46   3E-50  333.0  17.2  274   52-346    17-311 (316)
113 1b6c_B TGF-B superfamily recep 100.0 6.8E-45 2.3E-49  330.9  23.3  276   52-346    32-337 (342)
114 2wqm_A Serine/threonine-protei 100.0 5.2E-45 1.8E-49  327.3  22.1  265   60-346    30-298 (310)
115 2i0e_A Protein kinase C-beta I 100.0 1.2E-45 4.2E-50  336.8  18.2  249   60-338    18-276 (353)
116 1xbb_A Tyrosine-protein kinase 100.0 1.6E-45 5.5E-50  327.8  18.3  261   58-346    12-280 (291)
117 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-45   5E-50  336.4  18.3  252   59-338    50-305 (349)
118 3gxj_A TGF-beta receptor type- 100.0 2.8E-47 9.5E-52  340.6   6.7  267   61-346     2-298 (303)
119 3llt_A Serine/threonine kinase 100.0 1.5E-45 5.2E-50  337.7  18.0  211   47-270    20-261 (360)
120 3gni_B Strad alpha; kinase fol 100.0   2E-45 6.9E-50  340.5  19.0  268   60-338    23-333 (389)
121 2w1i_A JAK2; chromosomal rearr 100.0 3.2E-45 1.1E-49  331.2  19.8  268   61-346    40-323 (326)
122 3uzp_A CKI-delta, CKID, casein 100.0 7.5E-45 2.6E-49  323.9  21.7  264   60-346     7-281 (296)
123 2a2a_A Death-associated protei 100.0   5E-45 1.7E-49  329.2  20.7  252   60-338    10-272 (321)
124 3a62_A Ribosomal protein S6 ki 100.0 3.6E-45 1.2E-49  331.0  19.8  248   61-338    16-276 (327)
125 3is5_A Calcium-dependent prote 100.0 4.2E-45 1.4E-49  324.2  19.6  253   61-338    21-278 (285)
126 1p4o_A Insulin-like growth fac 100.0 4.2E-46 1.4E-50  336.1  13.4  271   52-344    15-298 (322)
127 2h8h_A Proto-oncogene tyrosine 100.0 2.6E-46   9E-51  359.6  12.8  266   53-345   258-523 (535)
128 3lxl_A Tyrosine-protein kinase 100.0 2.1E-45 7.3E-50  332.4  18.0  266   62-346    23-304 (327)
129 3hko_A Calcium/calmodulin-depe 100.0 1.7E-45 5.8E-50  335.3  17.4  263   56-338    20-330 (345)
130 3kn6_A Ribosomal protein S6 ki 100.0   3E-45   1E-49  331.2  18.7  250   67-338    16-270 (325)
131 1ob3_A PFPK5, cell division co 100.0 2.6E-45 8.8E-50  326.0  17.9  259   62-338     2-280 (288)
132 1fvr_A Tyrosine-protein kinase 100.0   3E-45   1E-49  331.4  18.7  261   62-346    25-301 (327)
133 3kk8_A Calcium/calmodulin depe 100.0 1.6E-44 5.5E-49  320.0  23.0  252   60-338     4-261 (284)
134 3p1a_A MYT1 kinase, membrane-a 100.0 2.3E-45 7.9E-50  330.0  17.7  243   62-338    57-304 (311)
135 4eut_A Serine/threonine-protei 100.0 1.7E-45 5.7E-50  341.7  16.7  273   61-345     8-309 (396)
136 3ork_A Serine/threonine protei 100.0 1.9E-45 6.4E-50  330.5  16.5  258   61-343    11-279 (311)
137 2ac3_A MAP kinase-interacting  100.0 2.5E-45 8.5E-50  330.2  17.1  262   61-338    11-295 (316)
138 3dls_A PAS domain-containing s 100.0   1E-45 3.5E-50  335.6  14.6  243   60-339    22-275 (335)
139 2qr7_A Ribosomal protein S6 ki 100.0 1.6E-45 5.6E-50  334.9  16.0  253   59-338    19-277 (342)
140 4agu_A Cyclin-dependent kinase 100.0 4.4E-45 1.5E-49  327.9  18.5  263   61-338     2-284 (311)
141 2a19_B Interferon-induced, dou 100.0 8.6E-45 2.9E-49  321.5  20.1  250   60-346     9-275 (284)
142 4ejn_A RAC-alpha serine/threon 100.0 1.2E-45 4.1E-50  347.9  15.3  248   61-338   147-404 (446)
143 2y94_A 5'-AMP-activated protei 100.0 4.1E-45 1.4E-49  345.2  19.0  246   62-338    16-266 (476)
144 2eue_A Carbon catabolite derep 100.0 4.2E-45 1.4E-49  322.4  17.8  245   62-338    13-262 (275)
145 3oz6_A Mitogen-activated prote 100.0 7.6E-45 2.6E-49  336.5  20.1  202   59-271     6-234 (388)
146 1nxk_A MAP kinase-activated pr 100.0 8.4E-45 2.9E-49  337.2  20.1  253   61-339    60-322 (400)
147 3brb_A Proto-oncogene tyrosine 100.0 1.2E-44   4E-49  325.5  20.4  270   56-347    28-310 (313)
148 2ozo_A Tyrosine-protein kinase 100.0 9.4E-45 3.2E-49  353.7  21.3  251   69-346   343-599 (613)
149 3bhy_A Death-associated protei 100.0   2E-44   7E-49  319.2  21.4  257   61-344     4-273 (283)
150 1u5q_A Serine/threonine protei 100.0   9E-45 3.1E-49  330.9  19.5  247   61-339    53-306 (348)
151 3fdn_A Serine/threonine-protei 100.0 7.2E-45 2.5E-49  321.6  18.3  247   61-339     8-258 (279)
152 1byg_A CSK, protein (C-termina 100.0 4.6E-45 1.6E-49  322.6  16.9  255   60-346    19-274 (278)
153 3g33_A Cell division protein k 100.0 2.4E-44 8.3E-49  322.7  21.8  261   60-338     7-296 (308)
154 3dbq_A Dual specificity protei 100.0 1.2E-44 4.2E-49  329.7  19.9  251   61-339     8-274 (343)
155 2yex_A Serine/threonine-protei 100.0 3.3E-45 1.1E-49  323.0  15.6  253   60-338     5-261 (276)
156 2r5t_A Serine/threonine-protei 100.0 1.9E-45 6.5E-50  337.9  14.6  246   61-336    37-287 (373)
157 2v62_A Serine/threonine-protei 100.0 4.8E-46 1.6E-50  339.2  10.4  264   61-343    36-326 (345)
158 3mtl_A Cell division protein k 100.0 3.2E-45 1.1E-49  330.9  15.6  261   62-338     2-281 (324)
159 2jam_A Calcium/calmodulin-depe 100.0 1.6E-44 5.6E-49  323.3  20.0  251   60-338     7-261 (304)
160 3e7e_A HBUB1, BUB1A, mitotic c 100.0 3.3E-44 1.1E-48  329.5  22.4  259   56-345    59-339 (365)
161 3cok_A Serine/threonine-protei 100.0 8.9E-45   3E-49  320.7  17.7  250   60-338     9-262 (278)
162 3rp9_A Mitogen-activated prote 100.0 6.2E-45 2.1E-49  344.2  17.7  268   61-338    52-396 (458)
163 2zmd_A Dual specificity protei 100.0 2.8E-44 9.7E-49  332.6  21.7  249   62-338    56-320 (390)
164 3eqc_A Dual specificity mitoge 100.0 9.8E-45 3.4E-49  332.4  18.4  198   61-270    32-232 (360)
165 1t4h_A Serine/threonine-protei 100.0 1.4E-44 4.7E-49  321.6  18.7  246   63-338    27-282 (290)
166 3byv_A Rhoptry kinase; malaria 100.0 2.2E-45 7.7E-50  338.7  13.9  250   61-344    72-367 (377)
167 2jii_A Serine/threonine-protei 100.0 4.8E-45 1.6E-49  333.5  15.8  264   61-346    41-337 (352)
168 4fl3_A Tyrosine-protein kinase 100.0 1.1E-44 3.8E-49  354.1  19.2  251   68-346   375-632 (635)
169 3a7i_A MST3 kinase, serine/thr 100.0 2.8E-44 9.5E-49  321.5  20.1  249   61-339    21-271 (303)
170 2j0j_A Focal adhesion kinase 1 100.0 1.8E-44   6E-49  353.9  20.3  264   56-346   384-652 (656)
171 2buj_A Serine/threonine-protei 100.0 2.4E-45 8.1E-50  330.5  13.0  263   61-345    28-306 (317)
172 2acx_A G protein-coupled recep 100.0 8.1E-45 2.8E-49  348.2  17.5  253   61-338   183-444 (576)
173 3ttj_A Mitogen-activated prote 100.0 4.6E-44 1.6E-48  338.1  22.4  256   61-338    61-355 (464)
174 3lij_A Calcium/calmodulin depe 100.0 2.9E-44   1E-48  342.6  21.2  251   60-338    35-291 (494)
175 3q5i_A Protein kinase; CDPK, m 100.0 4.5E-44 1.5E-48  342.2  22.4  252   59-338    33-301 (504)
176 2y7j_A Phosphorylase B kinase  100.0 7.2E-44 2.5E-48  327.2  22.7  255   57-338    89-359 (365)
177 2rku_A Serine/threonine-protei 100.0 1.9E-44 6.6E-49  321.2  18.3  248   61-338    14-265 (294)
178 3mwu_A Calmodulin-domain prote 100.0   3E-44   1E-48  341.9  20.7  251   60-338    20-276 (486)
179 1cm8_A Phosphorylated MAP kina 100.0 4.3E-44 1.5E-48  328.9  21.0  253   61-338    24-307 (367)
180 1vzo_A Ribosomal protein S6 ki 100.0 6.9E-45 2.4E-49  332.8  15.1  254   61-339    53-322 (355)
181 2vgo_A Serine/threonine-protei 100.0   3E-44   1E-48  318.4  18.7  246   61-338    13-262 (284)
182 4aaa_A Cyclin-dependent kinase 100.0 8.6E-45 2.9E-49  329.0  15.5  264   61-338    24-306 (331)
183 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.5E-44 8.6E-49  343.8  19.3  250   62-333   185-438 (543)
184 2yfx_A Tyrosine-protein kinase 100.0 1.8E-44 6.3E-49  326.3  17.5  264   60-345    28-304 (327)
185 1ua2_A CAK, cell division prot 100.0 4.5E-44 1.5E-48  326.3  19.8  264   57-338     5-291 (346)
186 3n9x_A Phosphotransferase; mal 100.0 1.8E-44 6.2E-49  338.4  17.6  198   61-268    25-252 (432)
187 2clq_A Mitogen-activated prote 100.0 1.5E-43   5E-48  315.4  22.5  252   63-338    23-278 (295)
188 2owb_A Serine/threonine-protei 100.0 4.8E-44 1.6E-48  324.7  19.5  249   60-338    39-291 (335)
189 3qyz_A Mitogen-activated prote 100.0 1.3E-44 4.5E-49  332.1  15.9  268   55-338    20-313 (364)
190 3nyv_A Calmodulin-domain prote 100.0 1.8E-44   6E-49  343.4  17.3  251   60-338    24-281 (484)
191 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.1E-44   7E-49  326.3  16.8  264   56-338    28-318 (329)
192 1u46_A ACK-1, activated CDC42  100.0 4.5E-44 1.5E-48  318.1  18.6  259   61-345    17-284 (291)
193 2x7f_A TRAF2 and NCK-interacti 100.0 1.6E-44 5.3E-49  326.4  15.9  262   50-338    12-286 (326)
194 3ll6_A Cyclin G-associated kin 100.0 1.7E-44 5.9E-49  327.2  16.0  261   57-346    23-309 (337)
195 3i6u_A CDS1, serine/threonine- 100.0 1.5E-44 5.1E-49  337.6  15.8  254   58-338   131-399 (419)
196 2w5a_A Serine/threonine-protei 100.0 9.3E-45 3.2E-49  320.7  13.6  255   61-340     5-269 (279)
197 2j7t_A Serine/threonine-protei 100.0   3E-45   1E-49  327.5  10.3  253   60-338    17-275 (302)
198 1x8b_A WEE1HU, WEE1-like prote 100.0 8.5E-44 2.9E-48  315.5  19.2  247   60-338     9-279 (289)
199 3com_A Serine/threonine-protei 100.0 3.8E-44 1.3E-48  322.2  16.7  251   60-338    27-278 (314)
200 3mi9_A Cell division protein k 100.0 1.5E-43 5.2E-48  323.4  20.9  262   61-338    16-311 (351)
201 1phk_A Phosphorylase kinase; g 100.0 2.1E-43 7.1E-48  315.0  21.2  253   59-338    14-283 (298)
202 3eb0_A Putative uncharacterize 100.0 3.7E-44 1.3E-48  331.3  16.3  261   57-338     2-321 (383)
203 3sv0_A Casein kinase I-like; t 100.0 2.3E-43 7.7E-48  333.9  21.9  263   61-346     6-279 (483)
204 3pfq_A PKC-B, PKC-beta, protei 100.0 6.2E-44 2.1E-48  351.1  18.5  249   60-338   339-597 (674)
205 3pg1_A Mitogen-activated prote 100.0 7.4E-44 2.5E-48  326.8  17.8  267   53-338    13-316 (362)
206 3kvw_A DYRK2, dual specificity 100.0 1.1E-43 3.7E-48  332.6  19.0  199   60-271    95-302 (429)
207 3fme_A Dual specificity mitoge 100.0   8E-44 2.7E-48  316.3  17.2  253   61-338     6-266 (290)
208 3nsz_A CK II alpha, casein kin 100.0 1.6E-43 5.5E-48  320.3  19.3  256   62-338    36-319 (330)
209 3lm5_A Serine/threonine-protei 100.0 1.4E-43 4.9E-48  320.5  18.5  260   54-338    20-287 (327)
210 2h6d_A 5'-AMP-activated protei 100.0 9.1E-44 3.1E-48  313.8  16.7  248   61-339    10-262 (276)
211 1wak_A Serine/threonine-protei 100.0   1E-43 3.6E-48  329.3  17.9  263   61-338    36-391 (397)
212 3an0_A Dual specificity mitoge 100.0 1.6E-44 5.4E-49  328.4  12.0  256   58-338    47-310 (340)
213 2xrw_A Mitogen-activated prote 100.0 4.6E-43 1.6E-47  322.6  21.7  256   61-338    24-318 (371)
214 2vwi_A Serine/threonine-protei 100.0 9.9E-45 3.4E-49  324.1  10.3  267   58-338    11-287 (303)
215 2ycf_A Serine/threonine-protei 100.0   2E-43 6.8E-48  318.8  18.8  253   59-338     7-274 (322)
216 2r3i_A Cell division protein k 100.0 3.5E-43 1.2E-47  313.6  19.9  260   62-338     3-283 (299)
217 4e7w_A Glycogen synthase kinas 100.0 1.2E-43 3.9E-48  329.0  17.1  257   61-338    39-321 (394)
218 2b9h_A MAP kinase FUS3, mitoge 100.0 6.4E-43 2.2E-47  319.3  21.3  263   60-338     9-305 (353)
219 2fst_X Mitogen-activated prote 100.0   2E-43 6.9E-48  324.2  17.5  255   61-338    28-311 (367)
220 2wtk_C Serine/threonine-protei 100.0 7.1E-43 2.4E-47  312.5  20.4  252   60-339     3-264 (305)
221 1zy4_A Serine/threonine-protei 100.0 3.4E-43 1.2E-47  313.9  18.2  252   60-338     4-283 (303)
222 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.1E-44 2.8E-48  320.7  14.2  266   53-346    24-303 (319)
223 1z57_A Dual specificity protei 100.0 7.3E-43 2.5E-47  316.6  20.2  267   61-345    13-337 (339)
224 2i6l_A Mitogen-activated prote 100.0 2.3E-43 7.7E-48  317.6  16.7  259   61-338    10-305 (320)
225 1j1b_A Glycogen synthase kinas 100.0 5.6E-43 1.9E-47  327.0  19.2  256   62-338    54-336 (420)
226 2pml_X PFPK7, Ser/Thr protein  100.0   1E-43 3.5E-48  323.9  13.8  260   61-338    30-322 (348)
227 3q60_A ROP5B; pseudokinase, tr 100.0 9.8E-44 3.3E-48  327.1  13.5  254   61-338    61-352 (371)
228 2wei_A Calmodulin-domain prote 100.0 9.5E-43 3.2E-47  309.3  18.8  253   58-338    18-276 (287)
229 3rgf_A Cyclin-dependent kinase 100.0 5.1E-43 1.7E-47  326.0  17.8  271   61-338    19-333 (405)
230 3aln_A Dual specificity mitoge 100.0 4.2E-43 1.4E-47  317.3  16.6  257   61-338    21-285 (327)
231 4exu_A Mitogen-activated prote 100.0 2.5E-42 8.6E-47  317.7  21.3  255   60-338    40-323 (371)
232 2vx3_A Dual specificity tyrosi 100.0 6.2E-42 2.1E-46  316.3  23.0  203   58-271    50-261 (382)
233 2eu9_A Dual specificity protei 100.0 3.1E-42 1.1E-46  314.6  20.6  260   61-338    18-333 (355)
234 1blx_A Cyclin-dependent kinase 100.0 1.6E-42 5.5E-47  313.1  18.5  262   59-338     8-296 (326)
235 1q8y_A SR protein kinase; tran 100.0 7.8E-43 2.7E-47  321.0  16.4  263   61-338    18-333 (373)
236 3cek_A Dual specificity protei 100.0 3.6E-42 1.2E-46  309.3  19.6  260   52-339    18-293 (313)
237 3e3p_A Protein kinase, putativ 100.0 3.1E-42   1E-46  315.6  19.2  268   55-338    16-314 (360)
238 3coi_A Mitogen-activated prote 100.0 5.7E-42 1.9E-46  313.2  19.1  252   61-338    23-305 (353)
239 3fhr_A MAP kinase-activated pr 100.0 1.3E-42 4.3E-47  315.5  14.6  252   60-338    26-287 (336)
240 2iwi_A Serine/threonine-protei 100.0 6.6E-43 2.2E-47  313.9  12.4  246   55-338    24-283 (312)
241 3a99_A Proto-oncogene serine/t 100.0 2.9E-43 9.8E-48  317.6   9.0  248   53-338    34-293 (320)
242 3p23_A Serine/threonine-protei 100.0 2.4E-42 8.2E-47  323.5  15.4  249   61-338    23-283 (432)
243 2rio_A Serine/threonine-protei 100.0 3.1E-42 1.1E-46  323.3  15.4  252   64-338    17-295 (434)
244 3qa8_A MGC80376 protein; kinas 100.0 2.6E-42 8.7E-47  334.3  14.3  269   61-344    13-308 (676)
245 2dyl_A Dual specificity mitoge 100.0 2.1E-41 7.2E-46  304.7  19.2  254   58-338    21-283 (318)
246 2pzi_A Probable serine/threoni 100.0 1.1E-41 3.7E-46  336.6  18.4  240   61-344    79-327 (681)
247 3uqc_A Probable conserved tran 100.0 1.6E-40 5.6E-45  294.7  18.1  231   61-345    30-265 (286)
248 3m2w_A MAP kinase-activated pr 100.0 6.4E-40 2.2E-44  292.8  18.6  231   60-338    15-256 (299)
249 3dzo_A Rhoptry kinase domain;  100.0   7E-40 2.4E-44  305.4  13.2  244   61-338    77-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 2.9E-40 9.9E-45  299.9  10.4  244   61-337    19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 1.1E-33 3.7E-38  272.8   6.9  153  102-268   285-438 (569)
252 3en9_A Glycoprotease, O-sialog 100.0 2.3E-30 7.8E-35  248.3   8.3  185   65-268   339-538 (540)
253 1zar_A RIO2 kinase; serine kin  99.9 2.4E-25   8E-30  196.5  10.0  151   57-241    85-253 (282)
254 1zth_A RIO1 serine protein kin  99.8 1.1E-20 3.9E-25  164.4  11.2  137   64-216    49-219 (258)
255 4gyi_A RIO2 kinase; protein ki  99.7 1.6E-18 5.4E-23  157.3   4.4  139   62-216    95-265 (397)
256 3tm0_A Aminoglycoside 3'-phosp  99.5 2.3E-13   8E-18  118.2  10.6  146   57-213     9-211 (263)
257 3dxp_A Putative acyl-COA dehyd  99.3 4.5E-12 1.5E-16  115.3   9.7  143   66-215    42-248 (359)
258 1nd4_A Aminoglycoside 3'-phosp  99.3   4E-12 1.4E-16  110.0   8.9  135   63-213    21-212 (264)
259 3sg8_A APH(2'')-ID; antibiotic  99.1 1.5E-10 5.2E-15  102.7   6.8  184   67-269    25-288 (304)
260 3r70_A Aminoglycoside phosphot  98.9 2.1E-08 7.3E-13   89.4  13.8  136   63-215    38-237 (320)
261 4gkh_A Aminoglycoside 3'-phosp  98.7 9.1E-08 3.1E-12   83.0  11.5  133   69-213    31-221 (272)
262 3d1u_A Putative fructosamine-3  98.7 1.4E-07 4.6E-12   82.8  12.0   76   66-145    19-97  (288)
263 3tdw_A Gentamicin resistance p  98.7 2.5E-07 8.6E-12   81.9  12.7  136   67-215    24-224 (306)
264 3ovc_A Hygromycin-B 4-O-kinase  98.5 5.9E-07   2E-11   81.4  12.0   75   66-146    45-122 (362)
265 3ats_A Putative uncharacterize  98.4 3.3E-07 1.1E-11   82.9   7.8   79   68-146    26-121 (357)
266 2q83_A YTAA protein; 2635576,   98.2 2.4E-05 8.1E-10   69.9  14.2   30  184-213   221-250 (346)
267 2olc_A MTR kinase, methylthior  98.2 9.7E-06 3.3E-10   74.3  11.7   75   67-143    35-120 (397)
268 3f7w_A Putative fructosamine-3  98.0 3.9E-05 1.4E-09   67.0  10.8   78   64-145    17-97  (288)
269 2pyw_A Uncharacterized protein  97.9 6.8E-05 2.3E-09   69.2  12.1   76  184-261   231-310 (420)
270 3jr1_A Putative fructosamine-3  97.9 7.4E-05 2.5E-09   66.0  11.5   75   67-145    41-118 (312)
271 3dxq_A Choline/ethanolamine ki  97.8 7.7E-05 2.6E-09   65.5  10.1   71   67-145    23-95  (301)
272 1zyl_A Hypothetical protein YI  97.8 0.00087   3E-08   59.4  15.9  163   49-215     8-223 (328)
273 3csv_A Aminoglycoside phosphot  97.6 0.00061 2.1E-08   60.6  12.4   33  184-216   182-218 (333)
274 2ppq_A HSK, HK, homoserine kin  97.6  0.0031 1.1E-07   55.6  16.1  159   52-213     7-215 (322)
275 2yle_A Protein spire homolog 1  97.4 0.00082 2.8E-08   55.3   9.5  101  143-264    33-133 (229)
276 3feg_A Choline/ethanolamine ki  97.4 0.00073 2.5E-08   61.3   9.9  143   67-214    55-253 (379)
277 1nw1_A Choline kinase (49.2 KD  97.4 0.00056 1.9E-08   63.2   9.0   72   67-144    78-158 (429)
278 2qg7_A Ethanolamine kinase PV0  97.3  0.0011 3.6E-08   61.8  10.7   74   67-145   113-188 (458)
279 3c5i_A Choline kinase; choline  97.2 0.00084 2.9E-08   60.7   8.0   72   68-144    39-120 (369)
280 3i1a_A Spectinomycin phosphotr  97.0  0.0049 1.7E-07   54.9  11.4   32  184-215   205-236 (339)
281 3f2s_A CK, chetk-alpha, cholin  97.0  0.0026 8.9E-08   58.0   9.4  143   67-213    57-278 (401)
282 3mes_A Choline kinase; malaria  96.5   0.021 7.2E-07   52.4  11.1   74   67-145    75-157 (424)
283 3g15_A CK, chetk-alpha, cholin  95.3   0.065 2.2E-06   48.8   8.9   29  186-214   245-279 (401)
284 4ano_A ESSB; membrane protein,  86.9     1.9 6.6E-05   35.3   7.1   83  116-213    48-131 (219)
285 3cxl_A N-chimerin; SH2, RHO-GA  85.7    0.11 3.8E-06   48.2  -1.0   61   66-129   146-215 (463)
286 4ann_A ESSB; membrane protein,  84.0     1.4 4.7E-05   36.0   4.9  117  116-270    43-159 (215)
287 3oja_A Leucine-rich immune mol  65.5    0.53 1.8E-05   43.9  -2.7   29  102-130   323-351 (487)
288 3ls8_A Phosphatidylinositol 3-  51.9 1.6E+02  0.0056   28.0  14.7   46  162-214   454-501 (614)
289 2x6h_A GH13170P, VPS34, phosph  41.2      16 0.00056   35.4   3.2   45  163-214   529-575 (696)
290 1cja_A Protein (actin-fragmin   39.5      88   0.003   27.3   7.2  136   70-215    77-237 (342)
291 2y3a_A Phosphatidylinositol-4,  28.5      33  0.0011   35.1   3.2   25  190-214   940-964 (1092)
292 4gqc_A Thiol peroxidase, perox  26.9      53  0.0018   24.9   3.5   23  324-346   139-161 (164)
293 2wxf_A Phosphatidylinositol-4,  25.2      28 0.00096   35.1   1.9   25  190-214   788-812 (940)
294 1e7u_A Phosphatidylinositol 3-  23.7      32  0.0011   34.8   2.0   25  190-214   804-828 (961)
295 3hhm_A Phosphatidylinositol-4,  20.1      55  0.0019   33.5   2.9   47  161-214   912-961 (1091)

No 1  
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00  E-value=4.5e-60  Score=420.78  Aligned_cols=263  Identities=19%  Similarity=0.284  Sum_probs=211.4

Q ss_pred             ccCCCCCeecccCceEEEEEEeC------CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVLP------DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++|...+.||+|+||+||+|.+.      ++..+++|.+........++|.+|+.+|++++|||||+++|+|.+++.++|
T Consensus        13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l   92 (299)
T 4asz_A           13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM   92 (299)
T ss_dssp             GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence            56778899999999999999872      244555555555555566889999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhc--------cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEE
Q 045067          136 VFESAEYGNLHDLLKRSY--------QSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL  207 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~--------~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl  207 (347)
                      |||||++|+|.+++....        ......+++.++..++.|++.||+|||   +++|+||||||+|||++.++.+||
T Consensus        93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki  169 (299)
T 4asz_A           93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI  169 (299)
T ss_dssp             EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence            999999999999997531        112356999999999999999999999   999999999999999999999999


Q ss_pred             ecCCCCccCCCCCcee-eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          208 FNFSLSASIPEGETYI-DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      +|||+|+......... .....||+.|||||++.+..|+.++|||||||++|||+|.|+.||.....        .+...
T Consensus       170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~~~  241 (299)
T 4asz_A          170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--------NEVIE  241 (299)
T ss_dssp             CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHH
T ss_pred             CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--------HHHHH
Confidence            9999998765433222 23456999999999999999999999999999999999559999975321        22333


Q ss_pred             HHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          287 KYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..... ....          .+...++++.+|+.+||+.||++|||+.||++.|+++.++
T Consensus       242 ~i~~~-~~~~----------~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~  290 (299)
T 4asz_A          242 CITQG-RVLQ----------RPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA  290 (299)
T ss_dssp             HHHHT-CCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHcC-CCCC----------CCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            33222 1111          0112355788999999999999999999999999998764


No 2  
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00  E-value=2.6e-59  Score=421.39  Aligned_cols=263  Identities=19%  Similarity=0.270  Sum_probs=205.8

Q ss_pred             ccCCCCCeecccCceEEEEEEeC------CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVLP------DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++|...+.||+|+||+||+|.+.      ++..+++|.+........+.|.+|+.+|++++|||||+++|+|.+++.++|
T Consensus        41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l  120 (329)
T 4aoj_A           41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM  120 (329)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence            46777789999999999999862      345555666665555666889999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhcc----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCce
Q 045067          136 VFESAEYGNLHDLLKRSYQ----------SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP  205 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~  205 (347)
                      |||||++|+|.+++.....          ....++++.+++.++.|++.||+|||   +.+||||||||+|||++.++.+
T Consensus       121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~  197 (329)
T 4aoj_A          121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV  197 (329)
T ss_dssp             EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred             EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence            9999999999999976321          12346999999999999999999999   9999999999999999999999


Q ss_pred             EEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHH
Q 045067          206 KLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDF  284 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  284 (347)
                      ||+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+|.|+.||.....        .+.
T Consensus       198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--------~~~  269 (329)
T 4aoj_A          198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--------TEA  269 (329)
T ss_dssp             EECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--------HHH
T ss_pred             EEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--------HHH
Confidence            9999999987654332 2234567999999999999999999999999999999999449999964321        222


Q ss_pred             HHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..........        ..   +...++++.+|+.+||+.||++|||+.||++.|+.+.++
T Consensus       270 ~~~i~~g~~~--------~~---p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~  320 (329)
T 4aoj_A          270 IDCITQGREL--------ER---PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA  320 (329)
T ss_dssp             HHHHHHTCCC--------CC---CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHcCCCC--------CC---cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence            2332222111        01   112345788999999999999999999999999998764


No 3  
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00  E-value=7.9e-59  Score=413.02  Aligned_cols=264  Identities=20%  Similarity=0.272  Sum_probs=204.7

Q ss_pred             HhccCCCCCeecccCceEEEEEEeCCceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..+++...+.||+|+||+||+|++.+ .+|||.+... ......+.|.+|+.++++++|||||+++|++.+ +.++||||
T Consensus        34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE  111 (307)
T 3omv_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ  111 (307)
T ss_dssp             CTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence            34567788999999999999999854 4665554322 233445789999999999999999999999865 56899999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      ||++|+|.+++...    ...+++.++..++.|++.||+|||   +++||||||||+|||++.++.+||+|||+|+....
T Consensus       112 y~~gGsL~~~l~~~----~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~  184 (307)
T 3omv_A          112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred             cCCCCCHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence            99999999999763    357999999999999999999999   89999999999999999999999999999987653


Q ss_pred             CC-ceeeccccccCCccccccccc---CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          219 GE-TYIDDGVKGTSGIVAPEYART---GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       219 ~~-~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      .. ........||+.|||||++.+   +.|+.++|||||||++|||+ +|+.||.....        ...+......+..
T Consensus       185 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Ell-tg~~Pf~~~~~--------~~~~~~~~~~~~~  255 (307)
T 3omv_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM-TGELPYSHINN--------RDQIIFMVGRGYA  255 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH-HSSCTTTTCCC--------HHHHHHHHHTTCC
T ss_pred             CCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHH-HCCCCCCCCCh--------HHHHHHHHhcCCC
Confidence            32 222345689999999998864   46899999999999999999 89999964321        1222222222211


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                          .+.+.  ......++++.+|+.+||+.||++||||.||++.|+.++.++
T Consensus       256 ----~p~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          256 ----SPDLS--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             ----CCCST--TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             ----CCCcc--cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence                11111  111234567889999999999999999999999999987654


No 4  
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00  E-value=1.9e-59  Score=418.48  Aligned_cols=259  Identities=18%  Similarity=0.269  Sum_probs=206.0

Q ss_pred             cCCCCCeecccCceEEEEEEeC------C-ceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           63 NYHYRNIITESSIFRLCQGVLP------D-RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~~------~-~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++...+.||+|+||+||+|.+.      + ..||||++.........+.|.+|+.++++++|||||+++|+|.+++.++|
T Consensus        27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l  106 (308)
T 4gt4_A           27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM  106 (308)
T ss_dssp             GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred             HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence            4556778999999999999972      2 34555554444444445789999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc
Q 045067          136 VFESAEYGNLHDLLKRSYQ-----------SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV  204 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~  204 (347)
                      |||||++|+|.++|.....           .....+++..+..++.|++.||+|||   +++||||||||+|||+++++.
T Consensus       107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~  183 (308)
T 4gt4_A          107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN  183 (308)
T ss_dssp             EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred             EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence            9999999999999965311           11246899999999999999999999   999999999999999999999


Q ss_pred             eEEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHH
Q 045067          205 PKLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMD  283 (347)
Q Consensus       205 ~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  283 (347)
                      +||+|||+|+....... .......||+.|||||++.++.|+.++|||||||++|||+|.|+.||.....        .+
T Consensus       184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--------~~  255 (308)
T 4gt4_A          184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--------QD  255 (308)
T ss_dssp             EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--------HH
T ss_pred             EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--------HH
Confidence            99999999987643322 2234567999999999999999999999999999999999559999964321        22


Q ss_pred             HHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 045067          284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKM  343 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i  343 (347)
                      .... ...+....          .+..++..+.+|+.+||+.||++||||.||++.|+.+
T Consensus       256 ~~~~-i~~~~~~~----------~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          256 VVEM-IRNRQVLP----------CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHH-HHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHH-HHcCCCCC----------CcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            2222 22222111          1123356788999999999999999999999999854


No 5  
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00  E-value=5e-59  Score=419.44  Aligned_cols=249  Identities=20%  Similarity=0.268  Sum_probs=205.1

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeC
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESA  140 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  140 (347)
                      +.|+..+.||+|+||+||+|++ .++..+++|.+........+.+.+|+.+|++++|||||++++++.+++.+|||||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~  153 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  153 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence            4588899999999999999999 455544444444333344477899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCC
Q 045067          141 EYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE  220 (347)
Q Consensus       141 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  220 (347)
                      +||+|.+++.+      ..+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+|+......
T Consensus       154 ~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~  224 (346)
T 4fih_A          154 EGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  224 (346)
T ss_dssp             TTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS
T ss_pred             CCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC
Confidence            99999999976      56999999999999999999999   9999999999999999999999999999998775433


Q ss_pred             ceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCC
Q 045067          221 TYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDP  300 (347)
Q Consensus       221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (347)
                      . ...+.+||+.|||||++.+..|+.++||||+||++|||+ +|++||....        ............      .+
T Consensus       225 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml-~G~~PF~~~~--------~~~~~~~i~~~~------~~  288 (346)
T 4fih_A          225 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV-DGEPPYFNEP--------PLKAMKMIRDNL------PP  288 (346)
T ss_dssp             C-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSC--------HHHHHHHHHHSS------CC
T ss_pred             C-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcC--------HHHHHHHHHcCC------CC
Confidence            2 234578999999999999999999999999999999999 9999996432        122222222211      11


Q ss_pred             ccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          301 RIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       301 ~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .+.   .....++++.+|+.+||+.||++|||+.|+++
T Consensus       289 ~~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          289 RLK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             CCS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCC---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111   11234567889999999999999999999975


No 6  
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00  E-value=1.2e-58  Score=415.73  Aligned_cols=255  Identities=18%  Similarity=0.163  Sum_probs=203.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      .+.|...++||+|+||+||+|++ .++..+++|.+....     ...+|+.++++++|||||++++++.+++.+||||||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  131 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL  131 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence            35677788999999999999998 445444444444332     124799999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC-ceEEecCCCCccCCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY-VPKLFNFSLSASIPE  218 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~a~~~~~  218 (347)
                      |+||+|.+++.+.     +.+++..+..++.|++.||+|||   +++|+||||||+|||++.+| .+||+|||+|+....
T Consensus       132 ~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~  203 (336)
T 4g3f_A          132 LEGGSLGQLIKQM-----GCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQP  203 (336)
T ss_dssp             CTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--
T ss_pred             cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccC
Confidence            9999999999875     67999999999999999999999   99999999999999999987 699999999987754


Q ss_pred             CCce----eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          219 GETY----IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       219 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ....    .....+||+.|||||++.+..|+.++||||+||++|||+ +|++||.....    ....    .........
T Consensus       204 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml-tG~~Pf~~~~~----~~~~----~~i~~~~~~  274 (336)
T 4g3f_A          204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHML-NGCHPWTQYFR----GPLC----LKIASEPPP  274 (336)
T ss_dssp             ----------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSTTTCC----SCCH----HHHHHSCCG
T ss_pred             CCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCcCCCCCCCH----HHHH----HHHHcCCCC
Confidence            3221    123457999999999999999999999999999999999 99999975332    1111    111111110


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .         ...++..++.+.+++.+||+.||++|||+.|+++.|.+..+.
T Consensus       275 ~---------~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~  317 (336)
T 4g3f_A          275 I---------REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE  317 (336)
T ss_dssp             G---------GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             c---------hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhh
Confidence            0         011123356788999999999999999999999999887653


No 7  
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00  E-value=2.5e-58  Score=415.52  Aligned_cols=250  Identities=21%  Similarity=0.236  Sum_probs=198.7

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ++|+..+.||+|+||+||+|.+ .++..+++|.+...  .....+.+.+|+.+|++++|||||++++++.+++.+|||||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE  103 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD  103 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence            5799999999999999999998 44444444444332  23345779999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      ||+||+|.++|...   ....+++..+..++.||+.||+|||   +++|+||||||+|||++.++.+||+|||+|+....
T Consensus       104 y~~gg~L~~~i~~~---~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~  177 (350)
T 4b9d_A          104 YCEGGDLFKRINAQ---KGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS  177 (350)
T ss_dssp             CCTTCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH
T ss_pred             CCCCCcHHHHHHHc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecC
Confidence            99999999999753   2356789999999999999999999   99999999999999999999999999999987643


Q ss_pred             CCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccccc
Q 045067          219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIV  298 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      .. ......+||+.|||||++.+..|+.++||||+||++|||+ +|++||....        ........... ....  
T Consensus       178 ~~-~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyeml-tG~~PF~~~~--------~~~~~~~i~~~-~~~~--  244 (350)
T 4b9d_A          178 TV-ELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELC-TLKHAFEAGS--------MKNLVLKIISG-SFPP--  244 (350)
T ss_dssp             HH-HHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSS--------HHHHHHHHHHT-CCCC--
T ss_pred             Cc-ccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcC--------HHHHHHHHHcC-CCCC--
Confidence            21 1224567999999999999999999999999999999999 9999996432        22333333332 1111  


Q ss_pred             CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          299 DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                         .     ....+.++.+|+.+||+.||++|||+.|+++
T Consensus       245 ---~-----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          245 ---V-----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             ---C-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---C-----CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               1     1123456889999999999999999999986


No 8  
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=4.8e-58  Score=409.93  Aligned_cols=272  Identities=19%  Similarity=0.222  Sum_probs=202.6

Q ss_pred             ccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC----ccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE----IPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~lv~  137 (347)
                      .+|...+.||+|+||+||+|++++..||||++....  .....+..|+..+.+++|||||++++++.+++    .++|||
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~   80 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS   80 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence            456777899999999999999987777777654322  11122345666667889999999999998754    579999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF-----SRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      |||++|+|.++++.      ..+++..+.+++.|++.||+|||+..     ..+|+||||||+|||++.++.+||+|||+
T Consensus        81 Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGl  154 (303)
T 3hmm_A           81 DYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL  154 (303)
T ss_dssp             ECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred             cCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCC
Confidence            99999999999976      57999999999999999999999320     12999999999999999999999999999


Q ss_pred             CccCCCCCcee---eccccccCCcccccccccC------CCCCccchHHHHHHHHHHHhcCCCccccCccCCCC------
Q 045067          213 SASIPEGETYI---DDGVKGTSGIVAPEYARTG------YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGD------  277 (347)
Q Consensus       213 a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~------  277 (347)
                      |+.........   .....||+.|||||++.+.      .++.++|||||||++|||+ +|.+||.........      
T Consensus       155 a~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~-tg~~~~~~~~~~~~p~~~~~~  233 (303)
T 3hmm_A          155 AVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA-RRCSIGGIHEDYQLPYYDLVP  233 (303)
T ss_dssp             CEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHH-HTBCBTTBCCCCCCTTTTTSC
T ss_pred             CccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHH-HCCCCCCccccccccchhccc
Confidence            98765443221   2346799999999998764      4678999999999999999 888877543221110      


Q ss_pred             CchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          278 ESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...............    ..++.++......+.+..+.+|+.+||+.||++||||.||++.|++|.++
T Consensus       234 ~~~~~~~~~~~~~~~----~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          234 SDPSVEEMRKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             SSCCHHHHHHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             ccchHHHHHHHHhcc----cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            011112222222221    22333333233335567889999999999999999999999999998753


No 9  
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00  E-value=1e-57  Score=414.25  Aligned_cols=274  Identities=19%  Similarity=0.324  Sum_probs=218.3

Q ss_pred             cCHHHHHHHhccCCCCCeecccCceEEEEEEe-CC------ceEEEEEEccCCCchhHHHHHHHHHHHHhcCC-Cceeee
Q 045067           52 FSAKELERATNNYHYRNIITESSIFRLCQGVL-PD------RTISVVKFIDGSVFDAYDCCFNNIVFASQMSH-NNVLRL  123 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~------~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l  123 (347)
                      +...+++...++|+..+.||+|+||+||+|.+ ..      ..||+|++.........+.+.+|+.+|.+++| ||||++
T Consensus        54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l  133 (353)
T 4ase_A           54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL  133 (353)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence            45567777788999999999999999999997 21      23455555444444555779999999999965 899999


Q ss_pred             eeeeeeC-CccEEEEEeCCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 045067          124 IGCCLEV-EIPVLVFESAEYGNLHDLLKRSYQ-----------SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD  191 (347)
Q Consensus       124 ~~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  191 (347)
                      +|+|.++ +.++||||||++|+|.++|.+...           .....+++..+..++.|++.||+|||   +++|||||
T Consensus       134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRD  210 (353)
T 4ase_A          134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  210 (353)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCc
Confidence            9998764 578999999999999999976321           11245899999999999999999999   99999999


Q ss_pred             CCCCCeEECCCCceEEecCCCCccCCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCcccc
Q 045067          192 LKSSYILVSERYVPKLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNM  270 (347)
Q Consensus       192 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~  270 (347)
                      |||+|||++.++.+||+|||+|+........ ......||+.|||||++.+..|+.++|||||||++|||+|.|+.||..
T Consensus       211 LK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~  290 (353)
T 4ase_A          211 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  290 (353)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred             cCccceeeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCC
Confidence            9999999999999999999999877654433 334567999999999999999999999999999999999559999964


Q ss_pred             CccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          271 GLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...       . ..+......+....       .   +...++++.+++.+||+.||++|||+.||++.|+++.++
T Consensus       291 ~~~-------~-~~~~~~i~~g~~~~-------~---p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~  348 (353)
T 4ase_A          291 VKI-------D-EEFCRRLKEGTRMR-------A---PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  348 (353)
T ss_dssp             CCC-------S-HHHHHHHHHTCCCC-------C---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCH-------H-HHHHHHHHcCCCCC-------C---CccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence            321       1 12222233322111       1   112345688999999999999999999999999998764


No 10 
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00  E-value=1.5e-57  Score=401.85  Aligned_cols=244  Identities=20%  Similarity=0.264  Sum_probs=194.0

Q ss_pred             CCCCeecccCceEEEEEEe-C-CceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeee----CCccEEEE
Q 045067           65 HYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE----VEIPVLVF  137 (347)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~lv~  137 (347)
                      ...+.||+|+||+||+|.+ . +..+|+|++.... .....+.+.+|+.++++++|||||++++++.+    ++.++|||
T Consensus        29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm  108 (290)
T 3fpq_A           29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT  108 (290)
T ss_dssp             EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred             EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence            4456799999999999999 4 4456666654432 33345779999999999999999999999875    34689999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCCeEEC-CCCceEEecCCCCc
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP--IVFRDLKSSYILVS-ERYVPKLFNFSLSA  214 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlkp~Nill~-~~~~~kl~Dfg~a~  214 (347)
                      |||+||+|.+++.+.     ..+++..+..++.|++.||+|||   +++  |+||||||+|||++ .++.+||+|||+|+
T Consensus       109 Ey~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~ylH---~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~  180 (290)
T 3fpq_A          109 ELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT  180 (290)
T ss_dssp             ECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred             eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCEEecccChhheeEECCCCCEEEEeCcCCE
Confidence            999999999999875     68999999999999999999999   877  99999999999998 47999999999997


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      .....   ...+.+||+.|||||++.+ .|+.++|||||||++|||+ +|++||.....       ..... .....+..
T Consensus       181 ~~~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyell-tg~~Pf~~~~~-------~~~~~-~~i~~~~~  247 (290)
T 3fpq_A          181 LKRAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMA-TSEYPYSECQN-------AAQIY-RRVTSGVK  247 (290)
T ss_dssp             GCCTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHH-HSSCTTTTCSS-------HHHHH-HHHTTTCC
T ss_pred             eCCCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHH-HCCCCCCCCCc-------HHHHH-HHHHcCCC
Confidence            64432   2345689999999998875 5899999999999999999 99999964321       11222 22222211


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..         ......++++.+|+.+||+.||++|||+.|+++
T Consensus       248 ~~---------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          248 PA---------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CG---------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CC---------CCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11         111122446889999999999999999999986


No 11 
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00  E-value=1.2e-57  Score=420.21  Aligned_cols=249  Identities=20%  Similarity=0.266  Sum_probs=205.4

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeC
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESA  140 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  140 (347)
                      +.|+..+.||+|+||.||+|.+ .++..+++|.+........+.+.+|+.+|++++|||||++++++.+++.+|||||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~  230 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL  230 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence            5688999999999999999999 455555555444444444577999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCC
Q 045067          141 EYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE  220 (347)
Q Consensus       141 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  220 (347)
                      +||+|.+++..      ..+++..+..++.||+.||+|||   +++||||||||+|||++.+|.+||+|||+|+.+....
T Consensus       231 ~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~  301 (423)
T 4fie_A          231 EGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV  301 (423)
T ss_dssp             TTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC
T ss_pred             CCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC
Confidence            99999999976      56999999999999999999999   9999999999999999999999999999998775443


Q ss_pred             ceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCC
Q 045067          221 TYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDP  300 (347)
Q Consensus       221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (347)
                      . ...+.+||+.|||||++.+..|+.++|||||||++|||+ +|++||.....        ............      +
T Consensus       302 ~-~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml-~G~~PF~~~~~--------~~~~~~i~~~~~------~  365 (423)
T 4fie_A          302 P-RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMV-DGEPPYFNEPP--------LKAMKMIRDNLP------P  365 (423)
T ss_dssp             C-CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCH--------HHHHHHHHHSCC------C
T ss_pred             c-cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcCH--------HHHHHHHHcCCC------C
Confidence            2 234578999999999999999999999999999999999 99999964321        222222222211      1


Q ss_pred             ccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          301 RIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       301 ~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .+.   .....++++.+|+.+||+.||++|||+.|+++
T Consensus       366 ~~~---~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          366 RLK---NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             CCS---CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             CCc---ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            111   11123457889999999999999999999976


No 12 
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00  E-value=6.8e-58  Score=406.21  Aligned_cols=248  Identities=18%  Similarity=0.226  Sum_probs=205.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|+..+.||+|+||+||+|.+ .++..+++|++.+.   .....+.+.+|+.+|++++|||||++++++.+++.+|||
T Consensus        31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            36799999999999999999999 55555555555432   123346799999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      ||||+||+|.+++.+.     +.+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+|+..
T Consensus       111 mEy~~gG~L~~~i~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~  182 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKI-----GSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVL  182 (311)
T ss_dssp             ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceec
Confidence            9999999999999875     68999999999999999999999   999999999999999999999999999999887


Q ss_pred             CCCC-ceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          217 PEGE-TYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       217 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .... .....+.+||+.|||||++.+..|+.++||||+||++|||+ +|++||....        ........... .. 
T Consensus       183 ~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml-~G~~PF~~~~--------~~~~~~~i~~~-~~-  251 (311)
T 4aw0_A          183 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV-AGLPPFRAGN--------EGLIFAKIIKL-EY-  251 (311)
T ss_dssp             CTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHH-HSSCSSCCSS--------HHHHHHHHHHT-CC-
T ss_pred             CCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCC--------HHHHHHHHHcC-CC-
Confidence            5433 22345678999999999999999999999999999999999 9999996432        12233333322 11 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVA  337 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell  337 (347)
                           .++     ...++++.+|+.+||+.||++|||+.|++
T Consensus       252 -----~~p-----~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          252 -----DFP-----EKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             -----CCC-----TTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             -----CCC-----cccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence                 011     12245678999999999999999999864


No 13 
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=1.7e-56  Score=391.87  Aligned_cols=245  Identities=19%  Similarity=0.248  Sum_probs=187.4

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ++|+..+.||+|+||+||+|.. .++..+++|++....   ....+.+.+|+.++++++||||+++++++.+++.+|+||
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm   92 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence            6899999999999999999998 445555555444321   233467899999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||| +|+|.+++.+.     +.+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+|+...
T Consensus        93 Ey~-~g~L~~~l~~~-----~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~  163 (275)
T 3hyh_A           93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             ECC-CEEHHHHHHHS-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----
T ss_pred             eCC-CCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecC
Confidence            999 57999999764     67999999999999999999999   9999999999999999999999999999998764


Q ss_pred             CCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ...  ...+.+||+.|||||++.+..+ +.++||||+||++|+|+ +|++||....        .......... +... 
T Consensus       164 ~~~--~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~ll-tg~~PF~~~~--------~~~~~~~i~~-~~~~-  230 (275)
T 3hyh_A          164 DGN--FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML-CRRLPFDDES--------IPVLFKNISN-GVYT-  230 (275)
T ss_dssp             -------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHH-HSSCSSCCSS--------HHHHHHHHHH-TCCC-
T ss_pred             CCC--ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHH-HCCCCCCCCC--------HHHHHHHHHc-CCCC-
Confidence            432  2345789999999999988775 58999999999999999 9999996432        1222222222 2110 


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           +     +...++++.+++.+||+.||++|||+.|+++
T Consensus       231 -----~-----p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          231 -----L-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -----C-----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             -----C-----CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                 1     0122456789999999999999999999987


No 14 
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00  E-value=2.7e-55  Score=390.60  Aligned_cols=250  Identities=20%  Similarity=0.292  Sum_probs=188.1

Q ss_pred             ccCCCCCeecccCceEEEEEEe--CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC--------
Q 045067           62 NNYHYRNIITESSIFRLCQGVL--PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE--------  131 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------  131 (347)
                      ++|+..+.||+|+||+||+|.+  ++..+|+|++.........+.+.+|+.+|++++|||||++++++.+.+        
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~   84 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS   84 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence            4688999999999999999998  455666666554444455578999999999999999999999987644        


Q ss_pred             ----ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEE
Q 045067          132 ----IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL  207 (347)
Q Consensus       132 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl  207 (347)
                          .+|+|||||++|+|.+++...  ......++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||
T Consensus        85 ~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl  159 (299)
T 4g31_A           85 SPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKV  159 (299)
T ss_dssp             --CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEE
T ss_pred             CCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEE
Confidence                369999999999999999863  12234567788999999999999999   999999999999999999999999


Q ss_pred             ecCCCCccCCCCCce-----------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCC
Q 045067          208 FNFSLSASIPEGETY-----------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNG  276 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~  276 (347)
                      +|||+|+........           ...+.+||+.|||||++.+..|+.++|||||||++|||+ +   ||....    
T Consensus       160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell-~---Pf~~~~----  231 (299)
T 4g31_A          160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL-Y---PFSTQM----  231 (299)
T ss_dssp             CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH-S---CCSSHH----
T ss_pred             ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHc-c---CCCCcc----
Confidence            999999876543211           123457999999999999999999999999999999999 5   664211    


Q ss_pred             CCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          277 DESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                         ........ ......          +.......+.+.+++.+||+.||++|||+.|+++
T Consensus       232 ---~~~~~~~~-~~~~~~----------p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          232 ---ERVRTLTD-VRNLKF----------PPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             ---HHHHHHHH-HHTTCC----------CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---HHHHHHHH-HhcCCC----------CCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               01111111 111111          1223344556789999999999999999999986


No 15 
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00  E-value=1.6e-56  Score=397.27  Aligned_cols=247  Identities=18%  Similarity=0.184  Sum_probs=194.7

Q ss_pred             ccCCCCCeecccCceEEEEEEe----CCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL----PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++|+..+.||+|+||+||+|..    .++..+++|++....  ......+.+|+.+|++++|||||++++++.+++.+||
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            5799999999999999999987    234555555554332  2223568899999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      |||||+||+|.+++.+.     +.+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+|+.
T Consensus       104 vmEy~~gg~L~~~l~~~-----~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  175 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE-----VMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKE  175 (304)
T ss_dssp             EECCCTTCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC
T ss_pred             EEEcCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEeccccccee
Confidence            99999999999999876     68999999999999999999999   99999999999999999999999999999986


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ...... ...+.+||+.|||||++.+..|+.++||||+||++|||+ +|++||....        ............ . 
T Consensus       176 ~~~~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyeml-tG~~PF~~~~--------~~~~~~~i~~~~-~-  243 (304)
T 3ubd_A          176 SIDHEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEML-TGTLPFQGKD--------RKETMTMILKAK-L-  243 (304)
T ss_dssp             -----C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH-HSSCSSCCSS--------HHHHHHHHHHCC-C-
T ss_pred             ccCCCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHH-hCCCCCCCcC--------HHHHHHHHHcCC-C-
Confidence            543322 234578999999999999999999999999999999999 9999996432        122233332221 1 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTM-----IDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~-----~ell~  338 (347)
                           ..     +...++++.+|+.+||+.||++|||+     +|+++
T Consensus       244 -----~~-----p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          244 -----GM-----PQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             -----CC-----CTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             -----CC-----CCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence                 00     11234568899999999999999995     56653


No 16 
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.6e-51  Score=379.67  Aligned_cols=259  Identities=17%  Similarity=0.228  Sum_probs=196.9

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeee------CCc
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE------VEI  132 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  132 (347)
                      ++|+..+.||+|+||+||+|.+ .++ .||+|++.... .....+.+.+|+.+|++++|||||++++++..      .+.
T Consensus        54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~  133 (398)
T 4b99_A           54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS  133 (398)
T ss_dssp             SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred             CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence            5799999999999999999998 444 45555543332 23344678899999999999999999998764      357


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      +|||||||+ |+|.+++.+.     +.+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+
T Consensus       134 ~~ivmE~~~-g~L~~~i~~~-----~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGl  204 (398)
T 4b99_A          134 VYVVLDLME-SDLHQIIHSS-----QPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGM  204 (398)
T ss_dssp             EEEEEECCS-EEHHHHHTSS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeCCC-CCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecce
Confidence            899999997 6899999764     68999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCC---ceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          213 SASIPEGE---TYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       213 a~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      |+.+....   .....+.+||+.|+|||++.+. .++.++||||+||++|||+ +|++||.....        .......
T Consensus       205 a~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell-~G~~pF~g~~~--------~~~l~~I  275 (398)
T 4b99_A          205 ARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEML-ARRQLFPGKNY--------VHQLQLI  275 (398)
T ss_dssp             CBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH-HTSCSSCCSSH--------HHHHHHH
T ss_pred             eeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHH-HCCCCCCCCCH--------HHHHHHH
Confidence            98764332   1223457899999999988765 6799999999999999999 99999974321        1222222


Q ss_pred             Hhc-cCcc-cc---------------cCCccCC--chhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          289 IEN-RGFN-GI---------------VDPRIIG--DELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       289 ~~~-~~~~-~~---------------~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ... +... ..               +.+....  ....+..++++.+|+.+||+.||++|||+.|+++
T Consensus       276 ~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          276 MMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            111 0000 00               0000000  0011123457889999999999999999999875


No 17 
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00  E-value=1.8e-51  Score=375.47  Aligned_cols=198  Identities=20%  Similarity=0.257  Sum_probs=166.0

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe----CCc-eEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCC
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL----PDR-TISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVE  131 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~----~~~-~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  131 (347)
                      ....+.|...+.||+|+||+||+|+.    ..+ .+|+|++....   ....+.+|+.+|..+ +||||+++++++.+.+
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~---~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~   93 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS---HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND   93 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS---CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc---CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence            34567899999999999999999986    233 45555554432   225688999999998 6999999999999999


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC-CceEEecC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER-YVPKLFNF  210 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Df  210 (347)
                      .+|+||||+++|+|.+++.        .+++.++..++.|++.||+|||   ++||+||||||+|||++.+ +.+||+||
T Consensus        94 ~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DF  162 (361)
T 4f9c_A           94 HVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDF  162 (361)
T ss_dssp             EEEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCC
T ss_pred             EEEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcC
Confidence            9999999999999999983        4899999999999999999999   9999999999999999876 79999999


Q ss_pred             CCCccCCCCCc---------------------------eeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHh
Q 045067          211 SLSASIPEGET---------------------------YIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLS  262 (347)
Q Consensus       211 g~a~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~  262 (347)
                      |+|+.......                           ......+||+.|+|||++.+. .++.++||||+||++|||+ 
T Consensus       163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell-  241 (361)
T 4f9c_A          163 GLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLL-  241 (361)
T ss_dssp             TTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHH-
T ss_pred             CCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHH-
Confidence            99976543211                           112345799999999988765 5899999999999999999 


Q ss_pred             cCCCcccc
Q 045067          263 TGEDLFNM  270 (347)
Q Consensus       263 ~g~~p~~~  270 (347)
                      +|++||..
T Consensus       242 ~G~~Pf~~  249 (361)
T 4f9c_A          242 SGRYPFYK  249 (361)
T ss_dssp             HTCSSSSC
T ss_pred             HCCCCCCC
Confidence            99999853


No 18 
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00  E-value=1.4e-51  Score=372.83  Aligned_cols=291  Identities=27%  Similarity=0.498  Sum_probs=238.9

Q ss_pred             CCCccccCHHHHHHHhccCCCCCeecccCceEEEEEEeC-CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeee
Q 045067           46 YNPIRSFSAKELERATNNYHYRNIITESSIFRLCQGVLP-DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLI  124 (347)
Q Consensus        46 ~~~~~~~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~  124 (347)
                      ...++.|+..++...+++|...+.||+|+||.||+|... +..+|+|++...........+.+|+.+++.++||||++++
T Consensus        14 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~   93 (326)
T 3uim_A           14 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLR   93 (326)
T ss_dssp             -CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCC
T ss_pred             cCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceE
Confidence            345778999999999999999999999999999999984 4455555544433333334689999999999999999999


Q ss_pred             eeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC---CeEeccCCCCCeEECC
Q 045067          125 GCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR---PIVFRDLKSSYILVSE  201 (347)
Q Consensus       125 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~---~ivH~dlkp~Nill~~  201 (347)
                      +++.+++..++||||+++|+|.+++... ......+++..+..++.|++.||.|||   +.   +|+||||||+|||++.
T Consensus        94 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~ivH~Dlkp~Nil~~~  169 (326)
T 3uim_A           94 GFCMTPTERLLVYPYMANGSVASCLRER-PESQPPLDWPKRQRIALGSARGLAYLH---DHCDPKIIHRDVKAANILLDE  169 (326)
T ss_dssp             EEECCSSCCEEEEECCTTCBHHHHHHCC-STTCCCCCHHHHHHHHHHHHHHHHHHH---HSSSSCEECCCCSGGGEEECT
T ss_pred             EEEecCCceEEEEEeccCCCHHHHHHhc-cccCCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCeEeCCCchhhEEECC
Confidence            9999999999999999999999999864 223345999999999999999999999   77   9999999999999999


Q ss_pred             CCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchH
Q 045067          202 RYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFE  281 (347)
Q Consensus       202 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~  281 (347)
                      ++.+||+|||++...............||+.|+|||.+.+..++.++|||||||++|+|+ +|+.||.............
T Consensus       170 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~~~~~  248 (326)
T 3uim_A          170 EFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI-TGQRAFDLARLANDDDVML  248 (326)
T ss_dssp             TCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHH-HCCCSBCHHHHTTTSCSBH
T ss_pred             CCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHH-hCCCcccccccccccchhH
Confidence            999999999999877655544455567999999999998889999999999999999999 9999997543333444445


Q ss_pred             HHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHH
Q 045067          282 MDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKK  342 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~  342 (347)
                      ..+..............+...... .....+..+.+++.+||+.||++|||+.||++.|++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~  308 (326)
T 3uim_A          249 LDWVKGLLKEKKLEALVDVDLQGN-YKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG  308 (326)
T ss_dssp             HHHHTTTTSSCCSTTSSCTTCTTS-CCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred             HHHHHHHhhchhhhhhcChhhccc-cCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence            556555555555556666555433 345667889999999999999999999999999975


No 19 
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00  E-value=1.7e-50  Score=364.95  Aligned_cols=287  Identities=30%  Similarity=0.433  Sum_probs=231.7

Q ss_pred             ccCHHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC
Q 045067           51 SFSAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV  130 (347)
Q Consensus        51 ~~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  130 (347)
                      .++..++...+++|...+.||+|+||.||+|.+.++..+++|..........+.+.+|+.++++++||||+++++++.+.
T Consensus        28 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  107 (321)
T 2qkw_B           28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER  107 (321)
T ss_dssp             --CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCT
T ss_pred             eecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCC
Confidence            45566777789999999999999999999999854444444444444445557899999999999999999999999999


Q ss_pred             CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecC
Q 045067          131 EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF  210 (347)
Q Consensus       131 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  210 (347)
                      +..++||||+++|+|.+++... ......+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+||
T Consensus       108 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Df  183 (321)
T 2qkw_B          108 NEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDF  183 (321)
T ss_dssp             TCCEEEEECCTTCBTGGGSSSS-CCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCC
T ss_pred             CeEEEEEEcCCCCcHHHHHhcc-CCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeec
Confidence            9999999999999999999764 122346899999999999999999999   999999999999999999999999999


Q ss_pred             CCCccCCCCC-ceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          211 SLSASIPEGE-TYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       211 g~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      |++....... ........||+.|+|||++.+..++.++|||||||++|+|+ +|+.||.....  ........+.....
T Consensus       184 g~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell-~g~~p~~~~~~--~~~~~~~~~~~~~~  260 (321)
T 2qkw_B          184 GISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL-CARSAIVQSLP--REMVNLAEWAVESH  260 (321)
T ss_dssp             TTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHH-HCCTTCSCSSS--SSCCCHHHHTHHHH
T ss_pred             ccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHH-hCCCcccccCc--HHHHHHHHHhhhcc
Confidence            9997654322 22223456899999999998899999999999999999999 89999976543  22223344444444


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ..+.+....++.... ......+..+.+++.+||+.||++|||+.|+++.|+.+.+
T Consensus       261 ~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          261 NNGQLEQIVDPNLAD-KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             TTTCCCSSSSSSCTT-CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ccccHHHhcChhhcc-ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            455555666655433 2335667889999999999999999999999999998865


No 20 
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00  E-value=1.2e-50  Score=390.95  Aligned_cols=252  Identities=16%  Similarity=0.192  Sum_probs=206.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      .++|+..+.||+|+||.||+|.. .++..+++|.+........+.+.+|+.+|+.++|||||++++++.+++.++|||||
T Consensus       156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            46899999999999999999999 55555555555555545557899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC--CceEEecCCCCccCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER--YVPKLFNFSLSASIP  217 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~--~~~kl~Dfg~a~~~~  217 (347)
                      |+||+|.+++...    ...+++..+..++.||+.||.|||   +++|+||||||+|||++.+  +.+||+|||+|+.+.
T Consensus       236 ~~gg~L~~~i~~~----~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          236 MSGGELFEKVADE----HNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             CCCCBHHHHHTCT----TSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECC
T ss_pred             cCCCcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEcc
Confidence            9999999999652    257999999999999999999999   9999999999999999854  899999999998876


Q ss_pred             CCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGI  297 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (347)
                      ....  ....+||+.|||||++.+..|+.++||||+||++|||+ +|.+||.....        .......... ...  
T Consensus       309 ~~~~--~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml-~G~~Pf~~~~~--------~~~~~~i~~~-~~~--  374 (573)
T 3uto_A          309 PKQS--VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL-SGLSPFGGEND--------DETLRNVKSC-DWN--  374 (573)
T ss_dssp             TTSE--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH-HSCCSSCCSSH--------HHHHHHHHTT-CCC--
T ss_pred             CCCc--eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHH-HCCCCCCCcCH--------HHHHHHHHhC-CCC--
Confidence            5433  24468999999999999999999999999999999999 99999964321        2222222221 110  


Q ss_pred             cCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          298 VDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                          . ........++++.+|+.+||+.||++|||+.|+++
T Consensus       375 ----~-~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          375 ----M-DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             ----C-CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ----C-CcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                0 01111233567889999999999999999999986


No 21 
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00  E-value=1.7e-50  Score=388.92  Aligned_cols=249  Identities=16%  Similarity=0.172  Sum_probs=197.7

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHH---HHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCF---NNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      -++|+..++||+|+||.||+|.. .++..+++|++.+..   ......+.   +++.+++.++|||||++++++.+.+.+
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l  267 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL  267 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence            36799999999999999999999 566666666554321   11112333   346667778999999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      |||||||+||+|.++|.+.     +.+++..+..++.||+.||+|||   +++||||||||+|||++.+|.+||+|||+|
T Consensus       268 ylVmEy~~GGdL~~~l~~~-----~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA  339 (689)
T 3v5w_A          268 SFILDLMNGGDLHYHLSQH-----GVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA  339 (689)
T ss_dssp             EEEECCCCSCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred             EEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEeccccee
Confidence            9999999999999999875     67999999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCceeeccccccCCcccccccc-cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYAR-TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      +......   ..+.+||+.|||||++. +..|+.++||||+||++|||+ +|++||.....     ..............
T Consensus       340 ~~~~~~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmL-tG~~PF~~~~~-----~~~~~i~~~i~~~~  410 (689)
T 3v5w_A          340 CDFSKKK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL-RGHSPFRQHKT-----KDKHEIDRMTLTMA  410 (689)
T ss_dssp             EECSSCC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCGGGC-----CCHHHHHHHHHHCC
T ss_pred             eecCCCC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCh-----HHHHHHHHhhcCCC
Confidence            8765433   23568999999999986 457999999999999999999 99999975322     11112222222211


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT-----MIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs-----~~ell~  338 (347)
                       .      ..     +...++++.+|+.+||+.||.+|++     +.||++
T Consensus       411 -~------~~-----p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~  449 (689)
T 3v5w_A          411 -V------EL-----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  449 (689)
T ss_dssp             -C------CC-----CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred             -C------CC-----CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence             0      01     1123456889999999999999998     577653


No 22 
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00  E-value=8.2e-49  Score=352.18  Aligned_cols=261  Identities=20%  Similarity=0.272  Sum_probs=209.6

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      .++|...+.||+|+||+||+|.+ .++..+++|..........+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   88 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY   88 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence            35788889999999999999999 55555555555554555668899999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG  219 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  219 (347)
                      +++|+|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++......
T Consensus        89 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  161 (310)
T 3s95_A           89 IKGGTLRGIIKSM----DSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDE  161 (310)
T ss_dssp             CTTCBHHHHHHHC----CTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--
T ss_pred             cCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceecccc
Confidence            9999999999863    367999999999999999999999   999999999999999999999999999999876543


Q ss_pred             Cceee-------------ccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          220 ETYID-------------DGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       220 ~~~~~-------------~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      .....             ....||+.|+|||++.+..++.++||||||+++|+|+ +|..|+...............   
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~-~g~~~~~~~~~~~~~~~~~~~---  237 (310)
T 3s95_A          162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII-GRVNADPDYLPRTMDFGLNVR---  237 (310)
T ss_dssp             ------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HTCCSSTTTSCBCTTSSBCHH---
T ss_pred             cccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHh-cCCCCCcchhhhHHHHhhhhh---
Confidence            22111             1457999999999999999999999999999999999 888888654332221111111   


Q ss_pred             HHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          287 KYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ......     ..         ...++.+.+++.+||+.||++|||+.++++.|+++...
T Consensus       238 ~~~~~~-----~~---------~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~  283 (310)
T 3s95_A          238 GFLDRY-----CP---------PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH  283 (310)
T ss_dssp             HHHHHT-----CC---------TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cccccc-----CC---------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            000000     00         11233577999999999999999999999999998764


No 23 
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00  E-value=4e-48  Score=347.08  Aligned_cols=287  Identities=25%  Similarity=0.373  Sum_probs=229.4

Q ss_pred             CCccccCHHHHHHHhccCCCC------CeecccCceEEEEEEeCCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCC
Q 045067           47 NPIRSFSAKELERATNNYHYR------NIITESSIFRLCQGVLPDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSH  117 (347)
Q Consensus        47 ~~~~~~~~~e~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h  117 (347)
                      .....|++.++..++++|...      +.||+|+||.||+|..++..+++|++....   .....+.+.+|+.++++++|
T Consensus        10 ~~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h   89 (307)
T 2nru_A           10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH   89 (307)
T ss_dssp             -CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred             CCCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence            346789999999999999888      899999999999999987888888776532   23345779999999999999


Q ss_pred             CceeeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCe
Q 045067          118 NNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYI  197 (347)
Q Consensus       118 ~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Ni  197 (347)
                      |||+++++++.+.+..++||||+++++|.+++....  ....+++..+..++.|++.||.|||   +.+++||||||+||
T Consensus        90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Ni  164 (307)
T 2nru_A           90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANI  164 (307)
T ss_dssp             TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGE
T ss_pred             CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHE
Confidence            999999999999999999999999999999997531  2356999999999999999999999   99999999999999


Q ss_pred             EECCCCceEEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCC
Q 045067          198 LVSERYVPKLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNG  276 (347)
Q Consensus       198 ll~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~  276 (347)
                      +++.++.+||+|||++........ .......||+.|+|||.+.+ .++.++||||||+++|+|+ +|.+||......  
T Consensus       165 li~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~~--  240 (307)
T 2nru_A          165 LLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEII-TGLPAVDEHREP--  240 (307)
T ss_dssp             EECTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHH-HCCCSBCTTBSS--
T ss_pred             EEcCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHH-HCCCCcccCcch--
Confidence            999999999999999987654322 22334579999999998765 5789999999999999999 899999754321  


Q ss_pred             CCchHHHHHHHHHhc-cCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          277 DESFEMDFVKKYIEN-RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       277 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                        .....+....... ..+...+++.+.  ......+..+.+++.+||+.+|.+|||+.++++.|+++..|
T Consensus       241 --~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s  307 (307)
T 2nru_A          241 --QLLLDIKEEIEDEEKTIEDYIDKKMN--DADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS  307 (307)
T ss_dssp             --SBTTHHHHHHHTTSCCHHHHSCSSCS--CCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred             --HHHHHHHHHhhhhhhhhhhhcccccc--ccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence              1111222222111 122233333332  22345677899999999999999999999999999998764


No 24 
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00  E-value=1.8e-48  Score=351.94  Aligned_cols=270  Identities=20%  Similarity=0.184  Sum_probs=208.7

Q ss_pred             HhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC----ccEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE----IPVL  135 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----~~~l  135 (347)
                      ..++|+..+.||+|+||+||+|.+.+..+|+|++... . .......+|+.++++++||||+++++++.+..    .+++
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l   99 (322)
T 3soc_A           22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ-D-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL   99 (322)
T ss_dssp             TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG-G-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             chhhchhhheecccCceEEEEEEECCCEEEEEEeecC-c-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence            3467899999999999999999988766666665332 2 22345667999999999999999999998754    3699


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC----------CeEeccCCCCCeEECCCCce
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR----------PIVFRDLKSSYILVSERYVP  205 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~----------~ivH~dlkp~Nill~~~~~~  205 (347)
                      ||||+++|+|.+++..      ..+++..+..++.|++.||+|||   +.          +|+||||||+|||++.++.+
T Consensus       100 v~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH---~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~  170 (322)
T 3soc_A          100 ITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLH---EDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA  170 (322)
T ss_dssp             EEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHT---CCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred             EEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---hhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence            9999999999999976      46999999999999999999999   88          99999999999999999999


Q ss_pred             EEecCCCCccCCCCCce-eeccccccCCcccccccccC-----CCCCccchHHHHHHHHHHHhcCCCccccCccCCCC--
Q 045067          206 KLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTG-----YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGD--  277 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~--  277 (347)
                      ||+|||+++........ ......||+.|+|||++.+.     .++.++|||||||++|||+ +|+.||.........  
T Consensus       171 kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~-tg~~pf~~~~~~~~~~~  249 (322)
T 3soc_A          171 CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELA-SRCTAADGPVDEYMLPF  249 (322)
T ss_dssp             EECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH-TTBTTSSSCCCCCCCTT
T ss_pred             EEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHH-hCCCCCCCCcchhccch
Confidence            99999999776543322 22346799999999988763     5567899999999999999 999999754331110  


Q ss_pred             ------CchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          278 ------ESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       278 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                            ......... ......    ..+.+.........+.++.+++.+||+.||++|||+.|+++.|++|.+.
T Consensus       250 ~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          250 EEEIGQHPSLEDMQE-VVVHKK----KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHCSSCCHHHHHH-HHTTSC----CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhhhccCCchhhhhh-hhhccc----CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence                  011111111 111111    1122221122234566799999999999999999999999999999764


No 25 
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00  E-value=1.1e-48  Score=349.45  Aligned_cols=250  Identities=17%  Similarity=0.209  Sum_probs=202.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      .+.|...+.||+|+||+||+|.. .++..+++|..........+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~   98 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence            46799999999999999999998 44444444444333333447789999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG  219 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  219 (347)
                      +++|+|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++......
T Consensus        99 ~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  169 (297)
T 3fxz_A           99 LAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE  169 (297)
T ss_dssp             CTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred             CCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence            999999999976      46999999999999999999999   999999999999999999999999999999876543


Q ss_pred             CceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccC
Q 045067          220 ETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVD  299 (347)
Q Consensus       220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (347)
                      .. ......||+.|+|||.+.+..++.++||||+||++|+|+ +|..||.....        ............ .    
T Consensus       170 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~--------~~~~~~~~~~~~-~----  234 (297)
T 3fxz_A          170 QS-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI-EGEPPYLNENP--------LRALYLIATNGT-P----  234 (297)
T ss_dssp             TC-CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCH--------HHHHHHHHHHCS-C----
T ss_pred             cc-ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHhCCC-C----
Confidence            32 234467999999999999999999999999999999999 89999964321        111112221111 0    


Q ss_pred             CccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          300 PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       ...   .....+..+.+++.+||+.||++|||+.|+++
T Consensus       235 -~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          235 -ELQ---NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             -CCS---CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CCC---CccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence             110   11223456889999999999999999999976


No 26 
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00  E-value=7e-48  Score=346.03  Aligned_cols=268  Identities=23%  Similarity=0.297  Sum_probs=204.5

Q ss_pred             HHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           54 AKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSV-FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        54 ~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      ..++....++|...+.||+|+||+||+|...+..+++|.+..... ....+.+.+|+.++++++||||+++++++.+.+.
T Consensus        29 ~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~  108 (309)
T 3p86_A           29 GDDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN  108 (309)
T ss_dssp             ---CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred             cccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence            344445567899999999999999999998777777776655432 3344678999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCCeEECCCCceEEecC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP--IVFRDLKSSYILVSERYVPKLFNF  210 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlkp~Nill~~~~~~kl~Df  210 (347)
                      .++||||+++|+|.+++....  ....+++..+..++.|++.||+|||   +.+  |+||||||+||+++.++.+||+||
T Consensus       109 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH---~~~~~ivH~Dikp~NIll~~~~~~kL~Df  183 (309)
T 3p86_A          109 LSIVTEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLH---NRNPPIVHRNLKSPNLLVDKKYTVKVCDF  183 (309)
T ss_dssp             CEEEEECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHH---TSSSCCCCTTCCGGGEEECTTCCEEECCC
T ss_pred             eEEEEecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHH---cCCCCEECCCCChhhEEEeCCCcEEECCC
Confidence            999999999999999997631  1123999999999999999999999   888  999999999999999999999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      |+++...... .......||+.|+|||.+.+..++.++|||||||++|+|+ +|+.||.....        .........
T Consensus       184 g~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-tg~~Pf~~~~~--------~~~~~~~~~  253 (309)
T 3p86_A          184 GLSRLKASTF-LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA-TLQQPWGNLNP--------AQVVAAVGF  253 (309)
T ss_dssp             C------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHH-HCCCTTTTSCH--------HHHHHHHHH
T ss_pred             CCCccccccc-cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHh
Confidence            9997544322 1233467999999999999999999999999999999999 99999964321        112121111


Q ss_pred             ccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          291 NRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .....     ..     +...++++.+++.+||+.+|++|||+.++++.|+.+.++
T Consensus       254 ~~~~~-----~~-----~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          254 KCKRL-----EI-----PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             SCCCC-----CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             cCCCC-----CC-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            11100     01     112345688999999999999999999999999998764


No 27 
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-48  Score=354.89  Aligned_cols=250  Identities=20%  Similarity=0.238  Sum_probs=194.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ..++|...+.||+|+||+||+|.+ .++ .+|+|.+.........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~   87 (347)
T 3zgw_A            8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL   87 (347)
T ss_dssp             TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence            457889999999999999999998 444 455555444433334467899999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        88 E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~  159 (347)
T 3zgw_A           88 EYCPGGELFDYIISQ-----DRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPK  159 (347)
T ss_dssp             ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--
T ss_pred             eCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCccccc
Confidence            999999999999775     67999999999999999999999   9999999999999999999999999999987765


Q ss_pred             CCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ..........+||+.|+|||++.+..+ +.++||||+||++|+|+ +|..||....        ........... ... 
T Consensus       160 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~g~~Pf~~~~--------~~~~~~~i~~~-~~~-  228 (347)
T 3zgw_A          160 GNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLM-CGFLPFDDDN--------VMALYKKIMRG-KYD-  228 (347)
T ss_dssp             ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHH-HSSCSSCCSS--------HHHHHHHHHHT-CCC-
T ss_pred             CCCCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHH-HCCCCCCCCC--------HHHHHHHHHcC-CCC-
Confidence            444433455689999999999988765 89999999999999999 9999996432        12222222222 110 


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           .     +...++.+.+++.+||+.||++|||+.|+++
T Consensus       229 -----~-----p~~~s~~~~~li~~~L~~dP~~Rps~~eil~  260 (347)
T 3zgw_A          229 -----V-----PKWLSPSSILLLQQMLQVDPKKRISMKNLLN  260 (347)
T ss_dssp             -----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             -----C-----CCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence                 0     0112345779999999999999999999986


No 28 
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=4.5e-48  Score=340.31  Aligned_cols=258  Identities=22%  Similarity=0.342  Sum_probs=208.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      .++|...+.||+|+||.||+|.+ +++.+++ |........ .+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vav-K~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   86 (269)
T 4hcu_A            9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAI-KTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   86 (269)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEE-EEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred             hhhceeeheecCCCccEEEEEEecCCCeEEE-EEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEe
Confidence            45788889999999999999999 4455544 444443322 36799999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG  219 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  219 (347)
                      +++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++......
T Consensus        87 ~~~~~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~  159 (269)
T 4hcu_A           87 MEHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD  159 (269)
T ss_dssp             CTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred             CCCCcHHHHHHhc----CcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccc
Confidence            9999999999763    356899999999999999999999   999999999999999999999999999999876544


Q ss_pred             CceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccC
Q 045067          220 ETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVD  299 (347)
Q Consensus       220 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (347)
                      .........+|+.|+|||.+.+..++.++||||+|+++|+|++.|..||.....        ...........   ....
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--------~~~~~~~~~~~---~~~~  228 (269)
T 4hcu_A          160 QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDISTGF---RLYK  228 (269)
T ss_dssp             HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTTC---CCCC
T ss_pred             ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--------HHHHHHHhcCc---cCCC
Confidence            333334456788999999999899999999999999999999449999964321        12222222111   1111


Q ss_pred             CccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          300 PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      +.        ..+..+.+++.+||+.+|++|||+.++++.|+++.++
T Consensus       229 ~~--------~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          229 PR--------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             CT--------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             CC--------cCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            11        1244678999999999999999999999999999764


No 29 
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00  E-value=1.2e-47  Score=347.04  Aligned_cols=260  Identities=20%  Similarity=0.303  Sum_probs=206.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CC---ce-EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PD---RT-ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~---~~-~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      .++|...+.||+|+||+||+|.+ .+   +. +++|++.........+.+.+|+.++++++||||+++++++.+++..++
T Consensus        48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  127 (325)
T 3kul_A           48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI  127 (325)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred             hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence            35677889999999999999998 22   22 555555444444555779999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       128 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  200 (325)
T 3kul_A          128 VTEYMENGSLDTFLRTH----DGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV  200 (325)
T ss_dssp             EEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred             EeeCCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence            99999999999999652    357999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCc--eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          216 IPEGET--YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       216 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ......  .......+|+.|+|||++.+..++.++|||||||++|+|++.|..||.....        ............
T Consensus       201 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--------~~~~~~~~~~~~  272 (325)
T 3kul_A          201 LEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--------RDVISSVEEGYR  272 (325)
T ss_dssp             CC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--------HHHHHHHHTTCC
T ss_pred             cccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--------HHHHHHHHcCCC
Confidence            654322  2223345678899999999899999999999999999999449999964321        122222221111


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..           .....+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       273 ~~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~  314 (325)
T 3kul_A          273 LP-----------APMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRS  314 (325)
T ss_dssp             CC-----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             CC-----------CCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhC
Confidence            00           0112345688999999999999999999999999999764


No 30 
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00  E-value=2.4e-48  Score=358.50  Aligned_cols=266  Identities=23%  Similarity=0.317  Sum_probs=212.0

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      .+....++|...+.||+|+||.||+|.+ .++..+++|..... .....+.+.+|+.++++++||||+++++++.+++..
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~  187 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPI  187 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCc
Confidence            4444567888899999999999999999 45555555555433 333446788999999999999999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ++||||+++|+|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       188 ~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s  260 (377)
T 3cbl_A          188 YIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMS  260 (377)
T ss_dssp             EEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGC
T ss_pred             EEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCc
Confidence            9999999999999999764    246999999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCceee-ccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          214 ASIPEGETYID-DGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       214 ~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      +.......... ....+++.|+|||.+.+..++.++|||||||++|||++.|..||.....         .........+
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~---------~~~~~~~~~~  331 (377)
T 3cbl_A          261 REEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN---------QQTREFVEKG  331 (377)
T ss_dssp             EECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH---------HHHHHHHHTT
T ss_pred             eecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---------HHHHHHHHcC
Confidence            76543322111 1234577899999999889999999999999999999559999964321         1122222222


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                      ..       ...+   ...+..+.+++.+||+.||++|||+.++++.|+++.+.+
T Consensus       332 ~~-------~~~~---~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~~  376 (377)
T 3cbl_A          332 GR-------LPCP---ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKRH  376 (377)
T ss_dssp             CC-------CCCC---TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CC-------CCCC---CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhhc
Confidence            11       0011   122456889999999999999999999999999998753


No 31 
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00  E-value=9.5e-48  Score=346.99  Aligned_cols=261  Identities=19%  Similarity=0.251  Sum_probs=210.3

Q ss_pred             cccCHHHHHHHhcc----------CCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCC
Q 045067           50 RSFSAKELERATNN----------YHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN  118 (347)
Q Consensus        50 ~~~~~~e~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~  118 (347)
                      ..++.+++..+++.          |...+.||+|+||.||+|.. .++..+++|..........+.+.+|+.++++++||
T Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~  102 (321)
T 2c30_A           23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF  102 (321)
T ss_dssp             --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred             CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence            34888898888765          66677999999999999998 34555555555444444457799999999999999


Q ss_pred             ceeeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeE
Q 045067          119 NVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYIL  198 (347)
Q Consensus       119 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nil  198 (347)
                      ||+++++++...+..++||||+++++|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+||+
T Consensus       103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIl  173 (321)
T 2c30_A          103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSIL  173 (321)
T ss_dssp             TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEE
T ss_pred             CcceEEEEEEECCEEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEE
Confidence            999999999999999999999999999999865      56999999999999999999999   899999999999999


Q ss_pred             ECCCCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCC
Q 045067          199 VSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDE  278 (347)
Q Consensus       199 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~  278 (347)
                      ++.++.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|+|+ +|+.||.....     
T Consensus       174 l~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~-~g~~pf~~~~~-----  246 (321)
T 2c30_A          174 LTLDGRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMV-DGEPPYFSDSP-----  246 (321)
T ss_dssp             ECTTCCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCH-----
T ss_pred             ECCCCcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCH-----
Confidence            999999999999999876543222 23467999999999999999999999999999999999 89999964321     


Q ss_pred             chHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                         ......... ...     +....   ....+..+.+++.+||+.||++|||+.|+++
T Consensus       247 ---~~~~~~~~~-~~~-----~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          247 ---VQAMKRLRD-SPP-----PKLKN---SHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             ---HHHHHHHHH-SSC-----CCCTT---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ---HHHHHHHhc-CCC-----CCcCc---cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence               122222211 111     11111   1123456889999999999999999999986


No 32 
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00  E-value=1.1e-47  Score=337.48  Aligned_cols=259  Identities=19%  Similarity=0.287  Sum_probs=210.1

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeC
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESA  140 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  140 (347)
                      .++|...+.||+|+||.||+|.+.++..+++|........ .+.+.+|+.++.+++||||+++++++.++...++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (268)
T 3sxs_A            7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI   85 (268)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred             hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence            4678889999999999999999865544555555443322 367899999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCC
Q 045067          141 EYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE  220 (347)
Q Consensus       141 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  220 (347)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.++|+|||++.......
T Consensus        86 ~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~  158 (268)
T 3sxs_A           86 SNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ  158 (268)
T ss_dssp             TTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred             CCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence            999999999774    246999999999999999999999   9999999999999999999999999999998776655


Q ss_pred             ceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCC
Q 045067          221 TYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDP  300 (347)
Q Consensus       221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (347)
                      ........+|+.|+|||.+.+..++.++||||+|+++|+|++.|..||.....        ...........   ....+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~~---~~~~~  227 (268)
T 3sxs_A          159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN--------SEVVLKVSQGH---RLYRP  227 (268)
T ss_dssp             EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHHTTC---CCCCC
T ss_pred             hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh--------HHHHHHHHcCC---CCCCC
Confidence            44444566788899999999889999999999999999999339999964321        12222222111   11111


Q ss_pred             ccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          301 RIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       301 ~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .        ..++.+.+++.+||+.+|++|||+.++++.|+.+.+.
T Consensus       228 ~--------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          228 H--------LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             T--------TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             C--------cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            1        1234678999999999999999999999999988653


No 33 
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00  E-value=1.2e-47  Score=347.11  Aligned_cols=248  Identities=19%  Similarity=0.234  Sum_probs=202.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ..++|...+.||+|+||.||+|.+ .++ .+|+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   92 (328)
T 3fe3_A           13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI   92 (328)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence            456799999999999999999998 444 45555443322 233456788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        93 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  164 (328)
T 3fe3_A           93 MEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEF  164 (328)
T ss_dssp             ECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGG
T ss_pred             EECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceec
Confidence            9999999999999875     67999999999999999999999   999999999999999999999999999999766


Q ss_pred             CCCCceeeccccccCCcccccccccCCCC-CccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLN-EKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .....  ....+||+.|+|||++.+..++ +++||||+||++|+|+ +|+.||....        ........... ...
T Consensus       165 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~--------~~~~~~~i~~~-~~~  232 (328)
T 3fe3_A          165 TVGGK--LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLV-SGSLPFDGQN--------LKELRERVLRG-KYR  232 (328)
T ss_dssp             SSSCG--GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHH-HSSCSSCCSS--------HHHHHHHHHHC-CCC
T ss_pred             CCCCc--cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHH-hCCCCCCCCC--------HHHHHHHHHhC-CCC
Confidence            54332  3456799999999999887765 7999999999999999 8999996432        12222222221 111


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                            .  +   ...+..+.+++.+||+.||.+|||+.|+++
T Consensus       233 ------~--p---~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          233 ------I--P---FYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             ------C--C---TTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             ------C--C---CCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence                  0  0   112456789999999999999999999975


No 34 
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00  E-value=2.9e-47  Score=350.33  Aligned_cols=263  Identities=18%  Similarity=0.290  Sum_probs=208.6

Q ss_pred             hccCCCCCeecccCceEEEEEEe--------CCceEEEEEEccCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeC
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL--------PDRTISVVKFIDGS-VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEV  130 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~  130 (347)
                      .++|...+.||+|+||.||+|.+        .++..+++|..... .....+.+.+|+.+++++ +||||+++++++.+.
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~  159 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD  159 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence            46788889999999999999986        12344555555443 444557799999999999 899999999999999


Q ss_pred             CccEEEEEeCCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE
Q 045067          131 EIPVLVFESAEYGNLHDLLKRSYQ-----------SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV  199 (347)
Q Consensus       131 ~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill  199 (347)
                      +..++||||+++|+|.+++.....           .....+++..+..++.|++.||.|||   +.+|+||||||+|||+
T Consensus       160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV  236 (370)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred             CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEE
Confidence            999999999999999999986421           11245899999999999999999999   9999999999999999


Q ss_pred             CCCCceEEecCCCCccCCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCC
Q 045067          200 SERYVPKLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDE  278 (347)
Q Consensus       200 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~  278 (347)
                      +.++.+||+|||+++........ ......+|+.|+|||++.+..++.++|||||||++|||++.|..||.....     
T Consensus       237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~-----  311 (370)
T 2psq_A          237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----  311 (370)
T ss_dssp             CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----
T ss_pred             CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCH-----
Confidence            99999999999999876543321 123356788999999999999999999999999999999449999964321     


Q ss_pred             chHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      .   .. ......+...     ..     +...+.++.+++.+||+.+|++|||+.|+++.|+++..
T Consensus       312 ~---~~-~~~~~~~~~~-----~~-----~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~  364 (370)
T 2psq_A          312 E---EL-FKLLKEGHRM-----DK-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  364 (370)
T ss_dssp             G---GH-HHHHHTTCCC-----CC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             H---HH-HHHHhcCCCC-----CC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence            1   11 1112221111     00     11234568899999999999999999999999999875


No 35 
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00  E-value=1.8e-47  Score=341.05  Aligned_cols=269  Identities=18%  Similarity=0.275  Sum_probs=205.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-----CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC--Ccc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-----PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV--EIP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  133 (347)
                      .++|+..+.||+|+||+||+|.+     .++..+++|..........+.+.+|+.++++++||||+++++++...  ...
T Consensus         9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (295)
T 3ugc_A            9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   88 (295)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred             HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence            36788899999999999999984     34556666666555555567899999999999999999999998653  568


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus        89 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~  161 (295)
T 3ugc_A           89 KLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT  161 (295)
T ss_dssp             EEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSC
T ss_pred             EEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCccc
Confidence            9999999999999999763    245999999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCce--eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCcc-------CCCCCchHHHH
Q 045067          214 ASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLR-------LNGDESFEMDF  284 (347)
Q Consensus       214 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~  284 (347)
                      .........  ......+++.|+|||.+.+..++.++||||||+++|+|+ +|..|+.....       ...........
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (295)
T 3ugc_A          162 KVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF-TYIEKSKSPPAEFMRMIGNDKQGQMIVFH  240 (295)
T ss_dssp             C-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH-HTTCTTCSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             ccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHH-hcccccCCChHHHHhhhcCccccchhHHH
Confidence            876543321  123345778899999999999999999999999999999 88888754211       00011111111


Q ss_pred             HHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                      ...........       .   .+...+.++.+++.+||+.||++|||+.|+++.|+++.+.+
T Consensus       241 ~~~~~~~~~~~-------~---~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          241 LIELLKNNGRL-------P---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             HHHHHHTTCCC-------C---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             HHHHHhccCcC-------C---CCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence            11222211110       0   01123457889999999999999999999999999998764


No 36 
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00  E-value=2.7e-47  Score=339.90  Aligned_cols=260  Identities=20%  Similarity=0.282  Sum_probs=202.7

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. . +..+++|++....  .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv   89 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV   89 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence            45788899999999999999998 3 4455555553332  233456789999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++...
T Consensus        90 ~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A           90 MEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL  161 (294)
T ss_dssp             EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC
T ss_pred             EeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccc
Confidence            9999999999999875     67999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ............||+.|+|||.+.+..++.++||||+|+++|+|+ +|+.||.....        ............ ..
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll-~g~~pf~~~~~--------~~~~~~~~~~~~-~~  231 (294)
T 4eqm_A          162 SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEML-VGEPPFNGETA--------VSIAIKHIQDSV-PN  231 (294)
T ss_dssp             -------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHH-HSSCSSCSSCH--------HHHHHHHHSSCC-CC
T ss_pred             ccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCCh--------HHHHHHHhhccC-CC
Confidence            544333344567999999999999999999999999999999999 89999964321        111122221110 00


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-TMIDVAKQIKKMY  344 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-s~~ell~~L~~i~  344 (347)
                      . .     .......+..+.+++.+||+.||++|| ++.++.+.|+.+.
T Consensus       232 ~-~-----~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          232 V-T-----TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             H-H-----HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             c-c-----hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            0 0     001112345688999999999999998 8999999998764


No 37 
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00  E-value=2.3e-46  Score=335.92  Aligned_cols=264  Identities=20%  Similarity=0.272  Sum_probs=201.3

Q ss_pred             HhccCCCCCeecccCceEEEEEEeCCceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..++|...+.||+|+||.||+|.+.+ .+++|.+... ......+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus        34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e  111 (307)
T 3lb7_A           34 EASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ  111 (307)
T ss_dssp             CTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred             cccceEEEeEecCCCCeEEEEEEECC-EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence            34678889999999999999998744 3444433222 22334577999999999999999999999865 456899999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++++|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus       112 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~  184 (307)
T 3lb7_A          112 WCEGSSLYKHLHVQ----ETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR  184 (307)
T ss_dssp             CCSSCBHHHHHHTS----CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---
T ss_pred             cCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccc
Confidence            99999999999752    367999999999999999999999   99999999999999999999999999999976543


Q ss_pred             C-CceeeccccccCCcccccccc---cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          219 G-ETYIDDGVKGTSGIVAPEYAR---TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       219 ~-~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      . .........||+.|+|||.+.   +..++.++|||||||++|+|+ +|+.||.....       . .........+..
T Consensus       185 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ell-tg~~Pf~~~~~-------~-~~~~~~~~~~~~  255 (307)
T 3lb7_A          185 WSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELM-TGELPYSHINN-------R-DQIIFMVGRGYA  255 (307)
T ss_dssp             ---------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHH-HSSCTTTTCCC-------H-HHHHHHHHHTCC
T ss_pred             ccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHH-hCCCCCccCCc-------H-HHHHHHHhcCCC
Confidence            2 122233467999999999886   667899999999999999999 89999964321       1 111112221111


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                      .    +.+.  ......++.+.+++.+||+.+|++|||+.|+++.|+.+..++
T Consensus       256 ~----~~~~--~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~  302 (307)
T 3lb7_A          256 S----PDLS--KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             C----CCST--TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             C----cchh--hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence            1    1110  011123456889999999999999999999999999998764


No 38 
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00  E-value=3e-47  Score=350.54  Aligned_cols=260  Identities=19%  Similarity=0.306  Sum_probs=195.9

Q ss_pred             hccCCCCCeecccCceEEEEEEeC----Cce-EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLP----DRT-ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~-~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      .++|...+.||+|+||.||+|.+.    ++. +++|++.........+.+.+|+.++++++||||+++++++.+++..++
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l  123 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI  123 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence            457899999999999999999873    344 444444333344455779999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       124 v~e~~~~~sL~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~  196 (373)
T 2qol_A          124 VTEYMENGSLDSFLRKH----DAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRV  196 (373)
T ss_dssp             EEECCTTCBHHHHHHTT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC-----
T ss_pred             EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccc
Confidence            99999999999999763    357999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCcee--eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          216 IPEGETYI--DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       216 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ........  .....+++.|+|||++.+..++.++|||||||++|||++.|+.||.....        ...... ...+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--------~~~~~~-i~~~~  267 (373)
T 2qol_A          197 LEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--------QDVIKA-VDEGY  267 (373)
T ss_dssp             -----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--------HHHHHH-HHTTE
T ss_pred             cccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH-HHcCC
Confidence            65432211  12334678899999999999999999999999999999559999964321        122222 22111


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .       ...   ....+..+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus       268 ~-------~~~---~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          268 R-------LPP---PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             E-------CCC---CTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             C-------CCC---CccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            0       000   112345688999999999999999999999999998653


No 39 
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00  E-value=2.5e-47  Score=337.75  Aligned_cols=261  Identities=20%  Similarity=0.276  Sum_probs=196.5

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-C---CceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-P---DRTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~---~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      ...++|...+.||+|+||.||+|.+ .   .+..+++|.... ......+.+.+|+.++++++||||+++++++. ++..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~   90 (281)
T 1mp8_A           12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV   90 (281)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred             EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence            3456788899999999999999998 2   223455555443 34445577999999999999999999999974 5678


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ++||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus        91 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~  163 (281)
T 1mp8_A           91 WIIMELCTLGELRSFLQVR----KYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS  163 (281)
T ss_dssp             EEEEECCTTEEHHHHHHHT----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC----
T ss_pred             EEEEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccc
Confidence            9999999999999999763    256999999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ...............+|+.|+|||.+.+..++.++||||||+++|+|+++|..||.....     .   ...... ..+.
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~-----~---~~~~~i-~~~~  234 (281)
T 1mp8_A          164 RYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN-----N---DVIGRI-ENGE  234 (281)
T ss_dssp             ---------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----G---GHHHHH-HTTC
T ss_pred             cccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH-----H---HHHHHH-HcCC
Confidence            876554333334456788999999999899999999999999999999559999975322     1   111111 1111


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...     .     ....++.+.+++.+||+.||++|||+.|+++.|+++.++
T Consensus       235 ~~~-----~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  277 (281)
T 1mp8_A          235 RLP-----M-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  277 (281)
T ss_dssp             CCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCC-----C-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            100     0     112345688999999999999999999999999998753


No 40 
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00  E-value=1.8e-47  Score=350.28  Aligned_cols=275  Identities=18%  Similarity=0.303  Sum_probs=215.2

Q ss_pred             ccCHHHHHHHhccCCCCCeecccCceEEEEEEe------CCceEEEEEEccC-CCchhHHHHHHHHHHHHhc-CCCceee
Q 045067           51 SFSAKELERATNNYHYRNIITESSIFRLCQGVL------PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQM-SHNNVLR  122 (347)
Q Consensus        51 ~~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~  122 (347)
                      .+...+++...++|...+.||+|+||.||+|.+      .++..+++|.+.. ......+.+.+|+.++.++ +||||++
T Consensus        11 ~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~   90 (359)
T 3vhe_A           11 PYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVN   90 (359)
T ss_dssp             CCCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred             CCCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceee
Confidence            466777888889999999999999999999984      3334455554443 4444457799999999999 7999999


Q ss_pred             eeeeeeeCC-ccEEEEEeCCCCCHHHHHhhhccC----------------------------------------------
Q 045067          123 LIGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQS----------------------------------------------  155 (347)
Q Consensus       123 l~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~----------------------------------------------  155 (347)
                      +++++.+.+ ..++||||+++|+|.+++......                                              
T Consensus        91 ~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (359)
T 3vhe_A           91 LLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEE  170 (359)
T ss_dssp             EEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------------------------------------
T ss_pred             eeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccc
Confidence            999988755 489999999999999999764210                                              


Q ss_pred             ---------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCC
Q 045067          156 ---------------HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE  220 (347)
Q Consensus       156 ---------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  220 (347)
                                     ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++.......
T Consensus       171 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~  247 (359)
T 3vhe_A          171 KSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP  247 (359)
T ss_dssp             -------------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCT
T ss_pred             cccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccc
Confidence                           0122899999999999999999999   9999999999999999999999999999998765433


Q ss_pred             c-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccC
Q 045067          221 T-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVD  299 (347)
Q Consensus       221 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (347)
                      . .......||+.|+|||++.+..++.++|||||||++|||++.|..||.....       . .........+.....  
T Consensus       248 ~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-------~-~~~~~~~~~~~~~~~--  317 (359)
T 3vhe_A          248 DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-------D-EEFCRRLKEGTRMRA--  317 (359)
T ss_dssp             TCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-------S-HHHHHHHHHTCCCCC--
T ss_pred             cchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccch-------h-HHHHHHHHcCCCCCC--
Confidence            2 2234567899999999999999999999999999999999339999964321       1 112222222211110  


Q ss_pred             CccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          300 PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       300 ~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                              +...++++.+++.+||+.||++|||+.|+++.|+++.++
T Consensus       318 --------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  356 (359)
T 3vhe_A          318 --------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  356 (359)
T ss_dssp             --------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             --------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence                    011245688999999999999999999999999998764


No 41 
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00  E-value=7.3e-47  Score=337.73  Aligned_cols=265  Identities=21%  Similarity=0.271  Sum_probs=203.7

Q ss_pred             HhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHh--cCCCceeeeeeeeeeC----Ccc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQ--MSHNNVLRLIGCCLEV----EIP  133 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~----~~~  133 (347)
                      ..++|...+.||+|+||+||+|.+++..+|+|++...    ....+.+|.+++..  ++||||+++++++...    ...
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence            3568999999999999999999997767666665332    22556677777766  7999999999987653    458


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEeccCCCCCeEECCCCceEEe
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF-----SRPIVFRDLKSSYILVSERYVPKLF  208 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivH~dlkp~Nill~~~~~~kl~  208 (347)
                      ++||||+++|+|.++++.      ..+++..+..++.|++.||+|||+..     +.+|+||||||+|||++.++.+||+
T Consensus        82 ~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~  155 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA  155 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC
T ss_pred             EEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe
Confidence            999999999999999965      57999999999999999999999422     5789999999999999999999999


Q ss_pred             cCCCCccCCCCCcee---eccccccCCcccccccccC------CCCCccchHHHHHHHHHHHhcC----------CCccc
Q 045067          209 NFSLSASIPEGETYI---DDGVKGTSGIVAPEYARTG------YLNEKCDVYSFGLLLLQLLSTG----------EDLFN  269 (347)
Q Consensus       209 Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~~~g----------~~p~~  269 (347)
                      |||+++.........   .....||+.|+|||++.+.      .++.++|||||||++|||+ +|          ..||.
T Consensus       156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~-tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVA-RRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH-TTBCBTTBCCCCCCTTT
T ss_pred             eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHH-hhhcCcccccccccccc
Confidence            999997655433322   2335799999999998876      4557999999999999999 88          77775


Q ss_pred             cCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 045067          270 MGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKM  343 (347)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i  343 (347)
                      .....  ..  .............    ..+...........+..+.+++.+||+.||++|||+.++++.|++|
T Consensus       235 ~~~~~--~~--~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          235 DVVPN--DP--SFEDMRKVVCVDQ----QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             TTSCS--SC--CHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccCCC--Cc--chhhhhHHHhccC----CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            43221  11  1112222221111    1122222223345677899999999999999999999999999986


No 42 
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=5.4e-47  Score=342.00  Aligned_cols=251  Identities=15%  Similarity=0.196  Sum_probs=205.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|...... ...+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~   82 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF   82 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence            46788999999999999999999 566666666665443 3346788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC--CCceEEecCCCCccCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE--RYVPKLFNFSLSASIP  217 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~  217 (347)
                      +++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.  ++.+||+|||++....
T Consensus        83 ~~g~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~  155 (321)
T 1tki_A           83 ISGLDIFERINTS----AFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLK  155 (321)
T ss_dssp             CCCCBHHHHHTSS----SCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECC
T ss_pred             CCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECC
Confidence            9999999999752    246999999999999999999999   999999999999999997  7899999999998775


Q ss_pred             CCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGI  297 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (347)
                      ....  .....||+.|+|||++.+..++.++||||+||++|+|+ +|.+||.....        ............ .  
T Consensus       156 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~--------~~~~~~i~~~~~-~--  221 (321)
T 1tki_A          156 PGDN--FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL-SGINPFLAETN--------QQIIENIMNAEY-T--  221 (321)
T ss_dssp             TTCE--EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHH-HSSCTTCCSSH--------HHHHHHHHHTCC-C--
T ss_pred             CCCc--cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHH-hCCCCCcCCCH--------HHHHHHHHcCCC-C--
Confidence            4432  23467899999999999888999999999999999999 99999964321        222222222211 0  


Q ss_pred             cCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          298 VDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           .........+.++.+++.+||+.||.+|||+.|+++
T Consensus       222 -----~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          222 -----FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             -----CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             -----CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence                 001111233567889999999999999999999987


No 43 
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00  E-value=8.1e-47  Score=345.73  Aligned_cols=252  Identities=19%  Similarity=0.256  Sum_probs=202.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCc------hhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVF------DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      ..+.|...+.||+|+||.||+|.. .++..+++|++.....      ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus        10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            456789999999999999999999 4455455554433221      124678999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC----ceEEe
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY----VPKLF  208 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~----~~kl~  208 (347)
                      .++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++    .+||+
T Consensus        90 ~~lv~e~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~  161 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEE
Confidence            99999999999999999764     67999999999999999999999   99999999999999998777    79999


Q ss_pred             cCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          209 NFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       209 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      |||++........  .....||+.|+|||++.+..++.++||||+||++|+|+ +|.+||.....        .......
T Consensus       162 DFG~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll-~g~~Pf~~~~~--------~~~~~~i  230 (361)
T 2yab_A          162 DFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGDTK--------QETLANI  230 (361)
T ss_dssp             CCSSCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSCCSSCCSSH--------HHHHHHH
T ss_pred             ecCCceEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHH
Confidence            9999987654332  23467999999999999999999999999999999999 89999964321        1222222


Q ss_pred             HhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .. ....  +     ........+..+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~-~~~~--~-----~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          231 TA-VSYD--F-----DEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HT-TCCC--C-----CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             Hh-cCCC--C-----CchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            11 1110  0     01111233457889999999999999999999985


No 44 
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00  E-value=7.7e-47  Score=334.81  Aligned_cols=262  Identities=18%  Similarity=0.291  Sum_probs=208.1

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ....++|...+.||+|+||.||+|.+.++..+++|........ .+.+.+|+.++.+++||||+++++++.+.+..++||
T Consensus        20 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   98 (283)
T 3gen_A           20 EIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIIT   98 (283)
T ss_dssp             BCCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEE
T ss_pred             cCCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEE
Confidence            3445678889999999999999999966655555555544333 367899999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++....
T Consensus        99 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~  171 (283)
T 3gen_A           99 EYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL  171 (283)
T ss_dssp             CCCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred             eccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence            999999999999763    256999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGI  297 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (347)
                      ...........+|+.|+|||.+.+..++.++||||+|+++|+|++.|+.||.....        ............   .
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--------~~~~~~~~~~~~---~  240 (283)
T 3gen_A          172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--------SETAEHIAQGLR---L  240 (283)
T ss_dssp             CHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HHHHHHHHTTCC---C
T ss_pred             ccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh--------hHHHHHHhcccC---C
Confidence            43332233455788899999999889999999999999999999339999964321        122222211110   0


Q ss_pred             cCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          298 VDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..+.        ..++.+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus       241 ~~~~--------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          241 YRPH--------LASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             CCCT--------TCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCC--------cCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            1111        1134678999999999999999999999999998763


No 45 
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00  E-value=6.4e-47  Score=349.71  Aligned_cols=252  Identities=18%  Similarity=0.230  Sum_probs=198.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  135 (347)
                      .++|...++||+|+||.||+|.. .++..+++|++...   .....+.+.+|..++.++ +||||+++++++.+.+.+++
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l  130 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF  130 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence            46799999999999999999999 56666666655432   222335688999999887 89999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       131 V~E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~  202 (396)
T 4dc2_A          131 VIEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE  202 (396)
T ss_dssp             EEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred             EEEcCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeee
Confidence            99999999999999875     67999999999999999999999   99999999999999999999999999999976


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ..... ......+||+.|+|||++.+..++.++|||||||++|||+ +|++||.......................... 
T Consensus       203 ~~~~~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell-~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-  279 (396)
T 4dc2_A          203 GLRPG-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-  279 (396)
T ss_dssp             CCCTT-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSTTTTC------CCHHHHHHHHHHCCC-
T ss_pred             cccCC-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHH-hCCCCCcccccccccchhhHHHHHHHHhcccc-
Confidence            33222 2234578999999999999999999999999999999999 89999964322111111112222222222111 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTM  333 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~  333 (347)
                           ..     +...+.++.+++.+||+.||++||++
T Consensus       280 -----~~-----p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          280 -----RI-----PRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             -----CC-----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             -----CC-----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence                 01     11234567899999999999999996


No 46 
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00  E-value=1.1e-46  Score=341.89  Aligned_cols=248  Identities=16%  Similarity=0.180  Sum_probs=202.4

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|++...   .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv   83 (337)
T 1o6l_A            4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence            36788999999999999999999 55555666655432   122346788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus        84 ~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~  155 (337)
T 1o6l_A           84 MEYANGGELFFHLSRE-----RVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEG  155 (337)
T ss_dssp             EECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred             EeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhc
Confidence            9999999999999875     67999999999999999999999   999999999999999999999999999999764


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ..... .....+||+.|+|||++.+..++.++||||+||++|||+ +|.+||.....        .......... ..  
T Consensus       156 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~--------~~~~~~i~~~-~~--  222 (337)
T 1o6l_A          156 ISDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDH--------ERLFELILME-EI--  222 (337)
T ss_dssp             CCTTC-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHC-CC--
T ss_pred             ccCCC-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHh-cCCCCCCCCCH--------HHHHHHHHcC-CC--
Confidence            33222 234567999999999999999999999999999999999 89999964321        1222222221 11  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-----TMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-----s~~ell~  338 (347)
                          ..+     ...++++.+++.+||+.||++||     ++.|+++
T Consensus       223 ----~~p-----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          223 ----RFP-----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             ----CCC-----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ----CCC-----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence                010     12245678999999999999999     8998875


No 47 
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00  E-value=2.8e-46  Score=350.77  Aligned_cols=254  Identities=18%  Similarity=0.195  Sum_probs=202.3

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ...++|...+.||+|+||+||+|.. .++..+++|.+....  ....+.+.+|+.++++++||||+++++++.+++..++
T Consensus         8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A            8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred             cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence            3567899999999999999999998 455555555444332  2334678999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC---CCCceEEecCCC
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSL  212 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~  212 (347)
                      ||||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++   .++.+||+|||+
T Consensus        88 v~E~~~gg~L~~~i~~~-----~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~  159 (444)
T 3soa_A           88 IFDLVTGGELFEDIVAR-----EYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGL  159 (444)
T ss_dssp             EECCCBCCBHHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSS
T ss_pred             EEEeCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCce
Confidence            99999999999999874     67999999999999999999999   99999999999999998   568899999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      +........ ......||+.|+|||++.+..++.++||||+||++|+|+ +|.+||.....        ........ .+
T Consensus       160 a~~~~~~~~-~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell-~G~~Pf~~~~~--------~~~~~~i~-~~  228 (444)
T 3soa_A          160 AIEVEGEQQ-AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILL-VGYPPFWDEDQ--------HRLYQQIK-AG  228 (444)
T ss_dssp             CBCCCTTCC-BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHH-HT
T ss_pred             eEEecCCCc-eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHH-hCCCCCCCccH--------HHHHHHHH-hC
Confidence            977654332 224467999999999999999999999999999999999 99999964321        12222222 22


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ... ...+      .....++++.+++.+||+.||++|||+.|+++
T Consensus       229 ~~~-~~~~------~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          229 AYD-FPSP------EWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             CCC-CCTT------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCC-CCcc------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            111 1111      11123456889999999999999999999986


No 48 
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00  E-value=9.9e-48  Score=362.76  Aligned_cols=266  Identities=20%  Similarity=0.303  Sum_probs=211.0

Q ss_pred             CHHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           53 SAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        53 ~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      ..++++...++|...+.||+|+||.||+|.+.++..+++|.+..... ..+.+.+|+.++++++||||+++++++. .+.
T Consensus       179 ~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          179 EKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             CTTCSBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             cccceeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCc
Confidence            34556666788999999999999999999995444444444444332 3478999999999999999999999986 567


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .++||||+++|+|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~  330 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSD---EGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGL  330 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSH---HHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred             cEEEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCC
Confidence            89999999999999999753   1236889999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      ++..............+|+.|+|||++.+..++.++|||||||++|||++.|+.||.....        ...........
T Consensus       331 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i~~~~  402 (454)
T 1qcf_A          331 ARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--------PEVIRALERGY  402 (454)
T ss_dssp             GGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHHHHHTC
T ss_pred             ceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHHHcCC
Confidence            9876543222223345678999999999899999999999999999999449999964321        22222222211


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ..        ..   +...+.++.+++.+||+.||++|||+.+|++.|+++..
T Consensus       403 ~~--------~~---~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          403 RM--------PR---PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             CC--------CC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             CC--------CC---CCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            11        01   11234568899999999999999999999999998864


No 49 
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.2e-45  Score=334.97  Aligned_cols=273  Identities=21%  Similarity=0.249  Sum_probs=208.9

Q ss_pred             cCHHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhc--CCCceeeeeeeeee
Q 045067           52 FSAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQM--SHNNVLRLIGCCLE  129 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~  129 (347)
                      .+...-....++|...+.||+|+||.||+|.+.+..+|+|.+...    ....+.+|..++..+  +||||+++++++..
T Consensus        27 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~  102 (337)
T 3mdy_A           27 LPLLVQRTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIK  102 (337)
T ss_dssp             SCHHHHTTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred             CCcccccccccceEEEeEeecCCCeEEEEEEECCceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEcc
Confidence            344455566789999999999999999999998777777665432    224456666666554  89999999999988


Q ss_pred             C----CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC--------CeEeccCCCCCe
Q 045067          130 V----EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR--------PIVFRDLKSSYI  197 (347)
Q Consensus       130 ~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~--------~ivH~dlkp~Ni  197 (347)
                      .    ...++||||+++|+|.+++..      ..+++..+..++.|++.||.|||   +.        +|+||||||+||
T Consensus       103 ~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~~~~ivH~Dikp~Ni  173 (337)
T 3mdy_A          103 GTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLH---TEIFSTQGKPAIAHRDLKSKNI  173 (337)
T ss_dssp             SCGGGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHH---SCBCSTTCBCCEECSCCCGGGE
T ss_pred             CCCCCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHH---HhhhhhccCCCEEecccchHHE
Confidence            7    688999999999999999976      46999999999999999999999   77        999999999999


Q ss_pred             EECCCCceEEecCCCCccCCCCCcee---eccccccCCcccccccccCCCCCc------cchHHHHHHHHHHHhcC----
Q 045067          198 LVSERYVPKLFNFSLSASIPEGETYI---DDGVKGTSGIVAPEYARTGYLNEK------CDVYSFGLLLLQLLSTG----  264 (347)
Q Consensus       198 ll~~~~~~kl~Dfg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~G~~l~el~~~g----  264 (347)
                      |++.++.+||+|||++..........   .....||+.|+|||++.+...+..      +|||||||++|||+ +|    
T Consensus       174 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~-tg~~~~  252 (337)
T 3mdy_A          174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVA-RRCVSG  252 (337)
T ss_dssp             EECTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHH-TTBCBT
T ss_pred             EECCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHH-hccCcc
Confidence            99999999999999997765433221   134579999999999987766655      99999999999999 88    


Q ss_pred             ------CCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          265 ------EDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       265 ------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                            +.||......  . . .............    ..+...........+.++.+++.+||+.||++|||+.++++
T Consensus       253 ~~~~~~~~p~~~~~~~--~-~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  324 (337)
T 3mdy_A          253 GIVEEYQLPYHDLVPS--D-P-SYEDMREIVCIKK----LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK  324 (337)
T ss_dssp             TBCCCCCCTTTTTSCS--S-C-CHHHHHHHHTTSC----CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             cccccccccHhhhcCC--C-C-chhhhHHHHhhhc----cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHH
Confidence                  5555432221  1 1 1122222222111    12222222223466778999999999999999999999999


Q ss_pred             HHHHHHHh
Q 045067          339 QIKKMYKS  346 (347)
Q Consensus       339 ~L~~i~~~  346 (347)
                      .|+++.++
T Consensus       325 ~L~~l~~~  332 (337)
T 3mdy_A          325 TLAKMSES  332 (337)
T ss_dssp             HHHHHHHT
T ss_pred             HHHHHHhh
Confidence            99999875


No 50 
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00  E-value=3.9e-46  Score=332.54  Aligned_cols=263  Identities=14%  Similarity=0.102  Sum_probs=207.6

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|+.....  ..+.+.+|+.++..+ +|+|++++++++.++...++|||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e   86 (298)
T 1csn_A            9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID   86 (298)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence            45788999999999999999997 555555555544332  225688999999999 79999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc-----eEEecCCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV-----PKLFNFSLS  213 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~-----~kl~Dfg~a  213 (347)
                      |+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.     +||+|||++
T Consensus        87 ~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~  158 (298)
T 1csn_A           87 LL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV  158 (298)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred             ec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence            99 88999999863    256999999999999999999999   999999999999999987776     999999999


Q ss_pred             ccCCCCCce------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHH
Q 045067          214 ASIPEGETY------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKK  287 (347)
Q Consensus       214 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  287 (347)
                      .........      ......||+.|+|||.+.+..++.++|||||||++|+|+ +|+.||.....     .........
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~-----~~~~~~~~~  232 (298)
T 1csn_A          159 KFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL-RGSLPWQGLKA-----ATNKQKYER  232 (298)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCS-----CCHHHHHHH
T ss_pred             cccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHH-cCCCCcchhhc-----cccHHHHHH
Confidence            876543221      124467999999999999999999999999999999999 99999975322     111111111


Q ss_pred             HHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ........       .........++.+.+++.+||+.||++|||+.+|++.|+++.++
T Consensus       233 ~~~~~~~~-------~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~  284 (298)
T 1csn_A          233 IGEKKQST-------PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER  284 (298)
T ss_dssp             HHHHHHHS-------CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHhhccCc-------cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence            11110000       00011112345788999999999999999999999999999765


No 51 
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00  E-value=1.7e-47  Score=358.01  Aligned_cols=263  Identities=16%  Similarity=0.177  Sum_probs=209.8

Q ss_pred             CHHHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeee
Q 045067           53 SAKELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCL  128 (347)
Q Consensus        53 ~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  128 (347)
                      +..++....++|...++||+|+||+||+|.. .++.++++|++....   ....+.+.+|+.++..++||||+++++++.
T Consensus        65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~  144 (437)
T 4aw2_A           65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ  144 (437)
T ss_dssp             HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred             hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            4456666788999999999999999999999 556666666654321   112244889999999999999999999999


Q ss_pred             eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEe
Q 045067          129 EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLF  208 (347)
Q Consensus       129 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~  208 (347)
                      +++.+++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~  217 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLA  217 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEEC
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEc
Confidence            999999999999999999999762    267999999999999999999999   9999999999999999999999999


Q ss_pred             cCCCCccCCCCCceeeccccccCCcccccccc-----cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHH
Q 045067          209 NFSLSASIPEGETYIDDGVKGTSGIVAPEYAR-----TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMD  283 (347)
Q Consensus       209 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  283 (347)
                      |||+++.............+||+.|+|||++.     ...++.++|||||||++|||+ +|++||.....        ..
T Consensus       218 DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ell-tG~~Pf~~~~~--------~~  288 (437)
T 4aw2_A          218 DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEML-YGETPFYAESL--------VE  288 (437)
T ss_dssp             CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHH-HSSCTTCCSSH--------HH
T ss_pred             chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHH-hCCCCCCCCCh--------hH
Confidence            99999877655554445578999999999886     567899999999999999999 99999964321        22


Q ss_pred             HHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q 045067          284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAED--RPTMIDVAK  338 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~--RPs~~ell~  338 (347)
                      ...........  ...+..     ....++++.+|+.+||..+|++  ||++.|+++
T Consensus       289 ~~~~i~~~~~~--~~~p~~-----~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          289 TYGKIMNHKER--FQFPTQ-----VTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHHHTHHHH--CCCCSS-----CCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             HHHhhhhcccc--ccCCcc-----cccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            22222221100  000110     0112456789999999888888  999999875


No 52 
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00  E-value=4.1e-47  Score=362.01  Aligned_cols=264  Identities=21%  Similarity=0.311  Sum_probs=212.3

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccE
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      +++...++|...+.||+|+||.||+|.+ .++..+++|.+..... ..+.+.+|+.++++++||||+++++++.+.+..+
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~  292 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY  292 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEE
Confidence            3444566788889999999999999999 4455555555554432 3478999999999999999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||+++|+|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus       293 lv~E~~~~g~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  366 (495)
T 1opk_A          293 IITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSR  366 (495)
T ss_dssp             EEEECCTTCBHHHHHHHS---CTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEE
T ss_pred             EEEEccCCCCHHHHHHhc---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccce
Confidence            999999999999999763   3356899999999999999999999   9999999999999999999999999999998


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ..............+++.|+|||++.+..++.++|||||||++|||++.|..||.....     .   .. ......+. 
T Consensus       367 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~-----~---~~-~~~~~~~~-  436 (495)
T 1opk_A          367 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----S---QV-YELLEKDY-  436 (495)
T ss_dssp             CCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----G---GH-HHHHHTTC-
T ss_pred             eccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH-----H---HH-HHHHHcCC-
Confidence            77554433334455778999999999999999999999999999999449999975321     1   11 11122111 


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                            +...   +...+..+.+++.+||+.||++|||+.+|++.|+.+.+
T Consensus       437 ------~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~  478 (495)
T 1opk_A          437 ------RMER---PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ  478 (495)
T ss_dssp             ------CCCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred             ------CCCC---CCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence                  0000   11234568899999999999999999999999988743


No 53 
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00  E-value=2.3e-46  Score=352.96  Aligned_cols=255  Identities=22%  Similarity=0.303  Sum_probs=206.1

Q ss_pred             HhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC-ccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE-IPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e  138 (347)
                      ..++|...+.||+|+||.||+|.+.+..+|+|.+....   ..+.+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus       191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e  267 (450)
T 1k9a_A          191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE  267 (450)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred             ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence            45678888999999999999999987776666655432   3477999999999999999999999987765 7899999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++|+|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++....
T Consensus       268 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~  341 (450)
T 1k9a_A          268 YMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  341 (450)
T ss_dssp             CCTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-
T ss_pred             ecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccc
Confidence            99999999999875   2234799999999999999999999   99999999999999999999999999999975433


Q ss_pred             CCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccccc
Q 045067          219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIV  298 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      ..    ....+++.|+|||.+.+..++.++|||||||++|||++.|+.||.....     .   ...... ..+..    
T Consensus       342 ~~----~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~-----~---~~~~~i-~~~~~----  404 (450)
T 1k9a_A          342 TQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----K---DVVPRV-EKGYK----  404 (450)
T ss_dssp             ---------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT-----T---THHHHH-HTTCC----
T ss_pred             cc----cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----H---HHHHHH-HcCCC----
Confidence            21    2236788999999999999999999999999999999549999975322     1   111111 11110    


Q ss_pred             CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          299 DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                         ..   .+...+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus       405 ---~~---~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          405 ---MD---APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             ---CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ---CC---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence               00   1112345788999999999999999999999999998763


No 54 
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00  E-value=2.5e-46  Score=338.39  Aligned_cols=252  Identities=21%  Similarity=0.247  Sum_probs=201.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCc-----hhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVF-----DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      ..+.|...+.||+|+||.||+|.. .++..+++|.+. ....     ...+.+.+|+.++++++||||+++++++.+...
T Consensus         9 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A            9 VDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             cccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            345688899999999999999999 445444444443 2211     134679999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC----ceEEe
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY----VPKLF  208 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~----~~kl~  208 (347)
                      .++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++    .+||+
T Consensus        89 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~  160 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAEK-----ESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKII  160 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTTS-----SCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEEC
T ss_pred             EEEEEEcCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEE
Confidence            99999999999999999764     67999999999999999999999   99999999999999999887    89999


Q ss_pred             cCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          209 NFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       209 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      |||++........  .....||+.|+|||++.+..++.++|||||||++|+|+ +|..||.....        .......
T Consensus       161 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~--------~~~~~~~  229 (326)
T 2y0a_A          161 DFGLAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGDTK--------QETLANV  229 (326)
T ss_dssp             CCTTCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSCCSSCCSSH--------HHHHHHH
T ss_pred             ECCCCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHH-HCcCCCCCCCH--------HHHHHHH
Confidence            9999987654322  23457999999999999899999999999999999999 89999964321        1122221


Q ss_pred             HhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ... ..      .. ........+..+.+++.+||+.||++|||+.|+++
T Consensus       230 ~~~-~~------~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          230 SAV-NY------EF-EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHT-CC------CC-CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             Hhc-CC------Cc-CccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            111 10      00 01111223456889999999999999999999986


No 55 
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00  E-value=4.4e-46  Score=344.04  Aligned_cols=267  Identities=19%  Similarity=0.260  Sum_probs=211.8

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-C-------C-ceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeee
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-P-------D-RTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCC  127 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~-------~-~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  127 (347)
                      ....++|...+.||+|+||+||+|.. .       . ..+++|++.........+.+.+|+.+++++ +||||+++++++
T Consensus        65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  144 (382)
T 3tt0_A           65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC  144 (382)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence            33457888899999999999999986 1       1 235555554444445557799999999999 899999999999


Q ss_pred             eeCCccEEEEEeCCCCCHHHHHhhhcc-----------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCC
Q 045067          128 LEVEIPVLVFESAEYGNLHDLLKRSYQ-----------SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSY  196 (347)
Q Consensus       128 ~~~~~~~lv~e~~~~g~L~~~l~~~~~-----------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~N  196 (347)
                      .+++..++||||+++|+|.+++.....           .....+++..+..++.|++.||.|||   +.+|+||||||+|
T Consensus       145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~N  221 (382)
T 3tt0_A          145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARN  221 (382)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGG
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcce
Confidence            999999999999999999999987421           11245999999999999999999999   9999999999999


Q ss_pred             eEECCCCceEEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCC
Q 045067          197 ILVSERYVPKLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLN  275 (347)
Q Consensus       197 ill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~  275 (347)
                      ||++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|+|++.|..||.....  
T Consensus       222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~--  299 (382)
T 3tt0_A          222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--  299 (382)
T ss_dssp             EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred             EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence            9999999999999999987654322 2233456788999999999999999999999999999999439999964321  


Q ss_pred             CCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          276 GDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                            .. .......+.....          ....+.++.+++.+||+.+|++|||+.|+++.|+++...
T Consensus       300 ------~~-~~~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  353 (382)
T 3tt0_A          300 ------EE-LFKLLKEGHRMDK----------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVAL  353 (382)
T ss_dssp             ------HH-HHHHHHTTCCCCC----------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ------HH-HHHHHHcCCCCCC----------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence                  12 2222222211110          012245688999999999999999999999999998753


No 56 
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00  E-value=6.5e-47  Score=344.32  Aligned_cols=269  Identities=25%  Similarity=0.360  Sum_probs=211.2

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEeCC------ceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeee
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVLPD------RTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCL  128 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  128 (347)
                      ++....++|...+.||+|+||.||+|...+      +..+++|.... ......+.+.+|+.++++++||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~  120 (343)
T 1luf_A           41 SLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA  120 (343)
T ss_dssp             HTBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred             eeEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence            344557889999999999999999999832      25555555544 34444577999999999999999999999999


Q ss_pred             eCCccEEEEEeCCCCCHHHHHhhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 045067          129 EVEIPVLVFESAEYGNLHDLLKRSYQS-------------------HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVF  189 (347)
Q Consensus       129 ~~~~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH  189 (347)
                      +++..++||||+++|+|.+++......                   ....+++..+..++.|++.||.|||   +.+|+|
T Consensus       121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH  197 (343)
T 1luf_A          121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH  197 (343)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCC
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeec
Confidence            999999999999999999999763110                   1256899999999999999999999   999999


Q ss_pred             ccCCCCCeEECCCCceEEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCcc
Q 045067          190 RDLKSSYILVSERYVPKLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLF  268 (347)
Q Consensus       190 ~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~  268 (347)
                      |||||+|||++.++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|+|++.|..||
T Consensus       198 ~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~  277 (343)
T 1luf_A          198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY  277 (343)
T ss_dssp             SCCSGGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred             CCCCcceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence            99999999999999999999999876543221 12234568899999999998899999999999999999994399999


Q ss_pred             ccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          269 NMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .....        .... .....+.....          +...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       278 ~~~~~--------~~~~-~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~  336 (343)
T 1luf_A          278 YGMAH--------EEVI-YYVRDGNILAC----------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER  336 (343)
T ss_dssp             TTSCH--------HHHH-HHHHTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred             CCCCh--------HHHH-HHHhCCCcCCC----------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence            64321        1222 22222221110          112245688999999999999999999999999998764


No 57 
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00  E-value=7.6e-46  Score=334.20  Aligned_cols=271  Identities=16%  Similarity=0.176  Sum_probs=208.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC--ccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE--IPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv  136 (347)
                      .+.|...+.||+|+||+||+|.. .++..+++|++. .......+.+.+|+.++++++||||+++++++....  ..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv   87 (319)
T 4euu_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (319)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence            35688899999999999999999 444445555444 333334577889999999999999999999988765  77999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE----CCCCceEEecCCC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV----SERYVPKLFNFSL  212 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~  212 (347)
                      |||+++++|.+++....  ....+++..+..++.|++.||+|||   +.+|+||||||+|||+    +.++.+||+|||+
T Consensus        88 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~  162 (319)
T 4euu_A           88 MEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (319)
T ss_dssp             EECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTT
T ss_pred             EeCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCC
Confidence            99999999999998642  1234999999999999999999999   9999999999999999    7888899999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccc--------cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHH
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYAR--------TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDF  284 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  284 (347)
                      ++.......  .....||+.|+|||++.        +..++.++|||||||++|||+ +|+.||.....    .......
T Consensus       163 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~----~~~~~~~  235 (319)
T 4euu_A          163 ARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA-TGSLPFRPFEG----PRRNKEV  235 (319)
T ss_dssp             CEECCTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHH-HSSCSEECTTC----GGGCHHH
T ss_pred             ceecCCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCc----cchhHHH
Confidence            987654432  23457999999999876        578899999999999999999 89999974322    1112223


Q ss_pred             HHHHHhccCcc---cc---------cCCccC-CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 045067          285 VKKYIENRGFN---GI---------VDPRII-GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKM  343 (347)
Q Consensus       285 ~~~~~~~~~~~---~~---------~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i  343 (347)
                      ...........   ..         +...+. ...........+.+++.+||+.||++|||+.|+++...+.
T Consensus       236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~  307 (319)
T 4euu_A          236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI  307 (319)
T ss_dssp             HHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred             HHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence            33333221100   00         000111 1123346677889999999999999999999999988764


No 58 
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00  E-value=1e-46  Score=330.96  Aligned_cols=259  Identities=21%  Similarity=0.316  Sum_probs=208.1

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeC
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESA  140 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  140 (347)
                      .++|...+.||+|+||.||+|.+.++..+++|........ .+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   85 (267)
T 3t9t_A            7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM   85 (267)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred             hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence            3578888999999999999999954444455554443322 367999999999999999999999999999999999999


Q ss_pred             CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCC
Q 045067          141 EYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGE  220 (347)
Q Consensus       141 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~  220 (347)
                      ++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++.......
T Consensus        86 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~  158 (267)
T 3t9t_A           86 EHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ  158 (267)
T ss_dssp             TTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred             CCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEccccccccccccc
Confidence            999999999763    256899999999999999999999   9999999999999999999999999999997765432


Q ss_pred             ceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCC
Q 045067          221 TYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDP  300 (347)
Q Consensus       221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (347)
                      ........+++.|+|||.+.+..++.++||||+|+++|+|++.|.+||.....        ......... +..  ...+
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~i~~-~~~--~~~~  227 (267)
T 3t9t_A          159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--------SEVVEDIST-GFR--LYKP  227 (267)
T ss_dssp             HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHT-TCC--CCCC
T ss_pred             ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--------HHHHHHHhc-CCc--CCCC
Confidence            22223456788999999999889999999999999999999449999964321        122222211 110  0111


Q ss_pred             ccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          301 RIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       301 ~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .        ..+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       228 ~--------~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          228 R--------LASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             T--------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             c--------cCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            1        1244678999999999999999999999999999764


No 59 
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00  E-value=1.1e-46  Score=334.49  Aligned_cols=264  Identities=21%  Similarity=0.286  Sum_probs=214.6

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++...++|...+.||+|+||+||+|.+ .++..+++|...... ...+.+.+|+.++++++||||+++++++.+++..++
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   86 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI   86 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred             ccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEE
Confidence            334567889999999999999999999 445555555555443 334779999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++++|.+++...   ....+++..+..++.+++.||.|||   +.+|+||||||+||+++.++.++|+|||++..
T Consensus        87 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~  160 (288)
T 3kfa_A           87 ITEFMTYGNLLDYLREC---NRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRL  160 (288)
T ss_dssp             EEECCTTEEHHHHHHHC---CTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGT
T ss_pred             EEEcCCCCcHHHHHHhc---ccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCcccee
Confidence            99999999999999764   3356999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .............+|+.|+|||.+.+..++.++||||+|+++|+|++.|.+||.....     ...    ......... 
T Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~-----~~~----~~~~~~~~~-  230 (288)
T 3kfa_A          161 MTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQV----YELLEKDYR-  230 (288)
T ss_dssp             SCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----GGH----HHHHHTTCC-
T ss_pred             ccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHH----HHHHhccCC-
Confidence            7655544445566788999999999899999999999999999999339999965322     111    111111110 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                          ..     .....++.+.+++.+||+.||.+|||+.++++.|+++..+
T Consensus       231 ----~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~  272 (288)
T 3kfa_A          231 ----ME-----RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  272 (288)
T ss_dssp             ----CC-----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----CC-----CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence                00     0112245688999999999999999999999999998653


No 60 
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00  E-value=2e-46  Score=336.86  Aligned_cols=266  Identities=21%  Similarity=0.315  Sum_probs=211.0

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe------CCceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL------PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE  131 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  131 (347)
                      ...++|...+.||+|+||.||+|..      .++..+++|.... ......+.+.+|+.++++++||||+++++++.+++
T Consensus        20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   99 (314)
T 2ivs_A           20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG   99 (314)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence            3457788999999999999999986      2335555555544 34445577999999999999999999999999999


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccC-------------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQS-------------------HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDL  192 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~-------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dl  192 (347)
                      ..++||||+++|+|.+++......                   ....+++..+..++.|++.||.|||   +.+|+||||
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~di  176 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDL  176 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCC
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCccccc
Confidence            999999999999999999864210                   1134899999999999999999999   999999999


Q ss_pred             CCCCeEECCCCceEEecCCCCccCCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccC
Q 045067          193 KSSYILVSERYVPKLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMG  271 (347)
Q Consensus       193 kp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~  271 (347)
                      ||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||+||++|+|++.|..||...
T Consensus       177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          177 AARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             SGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             chheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            999999999999999999999876544332 2234567889999999999999999999999999999993399999643


Q ss_pred             ccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          272 LRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..     ..    .......+....          .....++.+.+++.+||+.||++|||+.++++.|+++...
T Consensus       257 ~~-----~~----~~~~~~~~~~~~----------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          257 PP-----ER----LFNLLKTGHRME----------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             CG-----GG----HHHHHHTTCCCC----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CH-----HH----HHHHhhcCCcCC----------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            22     11    111222211110          0112345688999999999999999999999999998764


No 61 
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00  E-value=1.1e-46  Score=333.25  Aligned_cols=264  Identities=23%  Similarity=0.331  Sum_probs=209.9

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      +++...++|...+.||+|+||.||+|...++..+++|....... ..+.+.+|+.++++++||||+++++++. .+..++
T Consensus         7 ~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~   84 (279)
T 1qpc_A            7 EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYI   84 (279)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred             hcccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEE
Confidence            34445678899999999999999999996554445554444332 3477999999999999999999999986 456899


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++..
T Consensus        85 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~  158 (279)
T 1qpc_A           85 ITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARL  158 (279)
T ss_dssp             EEECCTTCBHHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             EEecCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCccccc
Confidence            99999999999999753   1136999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .............+++.|+|||.+.+..++.++||||||+++|+|++.|+.||.....        ....... ..+.. 
T Consensus       159 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--------~~~~~~~-~~~~~-  228 (279)
T 1qpc_A          159 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--------PEVIQNL-ERGYR-  228 (279)
T ss_dssp             CSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHH-HTTCC-
T ss_pred             ccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--------HHHHHHH-hcccC-
Confidence            7654433334456788999999999889999999999999999999449999964321        1222222 11110 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                       ...        ....+..+.+++.+||+.+|++|||+.++++.|+++..+
T Consensus       229 -~~~--------~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  270 (279)
T 1qpc_A          229 -MVR--------PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (279)
T ss_dssp             -CCC--------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCC--------cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHh
Confidence             000        112245688999999999999999999999999998764


No 62 
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00  E-value=2.9e-46  Score=342.57  Aligned_cols=254  Identities=19%  Similarity=0.249  Sum_probs=203.2

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ...++|...+.||+|+||.||+|.. .++..+++|++...  .....+.+.+|+.++++++||||+++++++.+++..++
T Consensus        26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l  105 (362)
T 2bdw_A           26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL  105 (362)
T ss_dssp             HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence            4567899999999999999999998 44554555544332  23345678999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC---CceEEecCCC
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER---YVPKLFNFSL  212 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~  212 (347)
                      ||||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.+   +.+||+|||+
T Consensus       106 v~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~  177 (362)
T 2bdw_A          106 VFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGL  177 (362)
T ss_dssp             EECCCCSCBHHHHHTTC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred             EEecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCc
Confidence            99999999999999764     67999999999999999999999   9999999999999999865   4599999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      +........  .....||+.|+|||++.+..++.++|||||||++|+|+ +|.+||.....        ....... ..+
T Consensus       178 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~Pf~~~~~--------~~~~~~i-~~~  245 (362)
T 2bdw_A          178 AIEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL-VGYPPFWDEDQ--------HRLYAQI-KAG  245 (362)
T ss_dssp             CBCCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHH-HHT
T ss_pred             ceEecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHH-HCCCCCCCCCH--------HHHHHHH-HhC
Confidence            987654322  23467999999999999989999999999999999999 99999964321        1222222 222


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                      ... ..      .......+.++.+++.+||+.||++|||+.|+++.
T Consensus       246 ~~~-~~------~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  285 (362)
T 2bdw_A          246 AYD-YP------SPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV  285 (362)
T ss_dssp             CCC-CC------TTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred             CCC-CC------cccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence            111 00      01112335578899999999999999999998753


No 63 
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00  E-value=8.2e-46  Score=335.24  Aligned_cols=252  Identities=20%  Similarity=0.233  Sum_probs=196.8

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC------
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE------  131 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  131 (347)
                      ..++|+..+.||+|+||.||+|.+ . +..+|+|++.........+.+.+|+.++++++||||+++++++.+..      
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~   83 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE   83 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence            346788999999999999999999 3 44555555544444445578999999999999999999999986643      


Q ss_pred             ---------------------------------------------------ccEEEEEeCCCCCHHHHHhhhccCCCCCC
Q 045067          132 ---------------------------------------------------IPVLVFESAEYGNLHDLLKRSYQSHSEPL  160 (347)
Q Consensus       132 ---------------------------------------------------~~~lv~e~~~~g~L~~~l~~~~~~~~~~l  160 (347)
                                                                         ..++||||+++|+|.+++....  .....
T Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~  161 (332)
T 3qd2_B           84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC--SLEDR  161 (332)
T ss_dssp             HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC--SGGGS
T ss_pred             hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc--Cccch
Confidence                                                               2799999999999999998742  22446


Q ss_pred             CHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCCc-----------eeeccccc
Q 045067          161 LLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGET-----------YIDDGVKG  229 (347)
Q Consensus       161 ~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~g  229 (347)
                      ++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++.......           .......|
T Consensus       162 ~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g  238 (332)
T 3qd2_B          162 EHGVCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG  238 (332)
T ss_dssp             CHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred             hhHHHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence            77789999999999999999   99999999999999999999999999999987754421           11234579


Q ss_pred             cCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhH
Q 045067          230 TSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLE  309 (347)
Q Consensus       230 t~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (347)
                      |+.|+|||.+.+..++.++|||||||++|+|+ +|..|+...           ...........          .+....
T Consensus       239 t~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~~~~~~~~~-----------~~~~~~~~~~~----------~~~~~~  296 (332)
T 3qd2_B          239 TKLYMSPEQIHGNNYSHKVDIFSLGLILFELL-YSFSTQMER-----------VRIITDVRNLK----------FPLLFT  296 (332)
T ss_dssp             CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHH-SCCCCHHHH-----------HHHHHHHHTTC----------CCHHHH
T ss_pred             CcCccChHHhcCCCCcchhhHHHHHHHHHHHH-HcCCChhHH-----------HHHHHHhhccC----------CCcccc
Confidence            99999999999999999999999999999999 777665321           11111111111          112233


Q ss_pred             HHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          310 HKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       310 ~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ...+.+.+++.+||+.||++|||+.|+++
T Consensus       297 ~~~~~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          297 QKYPQEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             cCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence            44567789999999999999999999986


No 64 
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00  E-value=3.3e-47  Score=343.69  Aligned_cols=252  Identities=21%  Similarity=0.277  Sum_probs=197.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .++|...+.||+|+||+||+|.. .++..+++|+.. .......+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   85 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence            46789999999999999999998 455555555443 3333334678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++|+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        86 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~  157 (323)
T 3tki_A           86 YCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRY  157 (323)
T ss_dssp             CCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEE
T ss_pred             cCCCCcHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceecc
Confidence            99999999999764     67999999999999999999999   99999999999999999999999999999976543


Q ss_pred             CCc-eeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          219 GET-YIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       219 ~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ... .......||+.|+|||++.+..+ +.++||||+||++|+|+ +|+.||.....    .   .............  
T Consensus       158 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~----~---~~~~~~~~~~~~~--  227 (323)
T 3tki_A          158 NNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSD----S---CQEYSDWKEKKTY--  227 (323)
T ss_dssp             TTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHH-HSSCSCSSSCT----T---SHHHHHHHTTCTT--
T ss_pred             CCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHH-hCCCCCCCCch----H---HHHHHHHhccccc--
Confidence            322 22235679999999999887765 78999999999999999 89999975332    0   0111111111110  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       ..       .....+..+.+++.+||+.||++|||+.|+++
T Consensus       228 -~~-------~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          228 -LN-------PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             -ST-------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CC-------ccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence             00       01123456789999999999999999999875


No 65 
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00  E-value=3.2e-46  Score=338.26  Aligned_cols=262  Identities=15%  Similarity=0.131  Sum_probs=206.6

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .++|...+.||+|+||+||+|.. .++..+++|+......  .+.+.+|+.+++++ +||||+++++++.+++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e   85 (330)
T 2izr_A            8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE   85 (330)
T ss_dssp             TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred             cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence            46788999999999999999998 5555555555543322  25688999999999 99999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc-----eEEecCCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV-----PKLFNFSLS  213 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~-----~kl~Dfg~a  213 (347)
                      |+ +++|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.     +||+|||++
T Consensus        86 ~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a  157 (330)
T 2izr_A           86 LL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA  157 (330)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred             eC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence            99 88999999863    367999999999999999999999   999999999999999998887     999999999


Q ss_pred             ccCCCCCce------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHH
Q 045067          214 ASIPEGETY------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKK  287 (347)
Q Consensus       214 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  287 (347)
                      +........      ......||+.|+|||++.+..++.++|||||||++|||+ +|+.||.....     .........
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell-~g~~Pf~~~~~-----~~~~~~~~~  231 (330)
T 2izr_A          158 KEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL-RGSLPWQGLKA-----DTLKERYQK  231 (330)
T ss_dssp             EESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTTTCCC-----SSHHHHHHH
T ss_pred             eeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHh-cCCCCcccccc-----ccHHHHHHH
Confidence            876443221      123567999999999999999999999999999999999 89999975321     111122222


Q ss_pred             HHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...... .      ..........+ ++.+++.+||+.+|.+||++.+|.+.|+++.+.
T Consensus       232 i~~~~~-~------~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~  282 (330)
T 2izr_A          232 IGDTKR-A------TPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR  282 (330)
T ss_dssp             HHHHHH-H------SCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHhhhc-c------CCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence            111100 0      00000001123 788999999999999999999999999998764


No 66 
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00  E-value=2.9e-46  Score=340.31  Aligned_cols=251  Identities=19%  Similarity=0.237  Sum_probs=198.1

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ++|...+.||+|+||.||+|.. .++..+++|++...   .....+.+.+|..++.++ +||||+++++++.+.+..++|
T Consensus         9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv   88 (345)
T 3a8x_A            9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV   88 (345)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence            5788999999999999999999 55565555555432   233446688999999988 899999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus        89 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~  160 (345)
T 3a8x_A           89 IEYVNGGDLMFHMQRQ-----RKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG  160 (345)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred             EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccc
Confidence            9999999999999875     67999999999999999999999   999999999999999999999999999999764


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ..... .....+||+.|+|||++.+..++.++||||+||++|||+ +|++||..........................  
T Consensus       161 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~--  236 (345)
T 3a8x_A          161 LRPGD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM-AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI--  236 (345)
T ss_dssp             CCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTTTC-------CHHHHHHHHHHCCC--
T ss_pred             cCCCC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHH-hCCCCcCCcccccccccccHHHHHHHHHcCCC--
Confidence            33221 234568999999999999999999999999999999999 89999965322111111111222222222111  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTM  333 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~  333 (347)
                          .++     ...+..+.+++.+||+.||++||++
T Consensus       237 ----~~p-----~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          237 ----RIP-----RSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             ----CCC-----TTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             ----CCC-----CCCCHHHHHHHHHHhcCCHhHCCCC
Confidence                010     1224567899999999999999996


No 67 
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00  E-value=4e-46  Score=327.74  Aligned_cols=254  Identities=20%  Similarity=0.216  Sum_probs=204.7

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC--CccEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV--EIPVLVF  137 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~lv~  137 (347)
                      .++|...+.||+|+||+||+|.+++..+++|.+.... .....+.+.+|+.++++++||||+++++++.+.  ...++||
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   88 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT   88 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred             HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence            3578889999999999999999987777776665443 234456799999999999999999999999887  7889999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP--IVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+  ++||||||+||+++.++.++++|||++..
T Consensus        89 e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~  162 (271)
T 3kmu_A           89 HWMPYGSLYNVLHEG---TNFVVDQSQAVKFALDMARGMAFLH---TLEPLIPRHALNSRSVMIDEDMTARISMADVKFS  162 (271)
T ss_dssp             ECCTTCBHHHHHHSC---SSCCCCHHHHHHHHHHHHHHHHHHT---TSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred             cccCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCceecCCCccceEEEcCCcceeEEeccceee
Confidence            999999999999864   2235899999999999999999999   888  99999999999999999999999987754


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCC---ccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNE---KCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      ...      ....||+.|+|||.+.+..++.   ++|||||||++|+|+ +|+.||.....        ...........
T Consensus       163 ~~~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~--------~~~~~~~~~~~  227 (271)
T 3kmu_A          163 FQS------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV-TREVPFADLSN--------MEIGMKVALEG  227 (271)
T ss_dssp             TSC------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHH-HCSCTTTTSCH--------HHHHHHHHHSC
T ss_pred             ecc------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHH-hCCCCccccCh--------HHHHHHHHhcC
Confidence            322      2346899999999988765544   799999999999999 89999964321        12222222222


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ...     ..     +...+..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus       228 ~~~-----~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          228 LRP-----TI-----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             CCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             CCC-----CC-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            111     11     11234568899999999999999999999999999865


No 68 
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00  E-value=8.8e-47  Score=341.58  Aligned_cols=257  Identities=18%  Similarity=0.291  Sum_probs=198.3

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCc-e----EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDR-T----ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~-~----~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++|...+.||+|+||+||+|.+ .++ .    +++|++.........+.+.+|+.++++++||||+++++++.++. .++
T Consensus        15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~   93 (327)
T 3poz_A           15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL   93 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred             HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence            5688889999999999999998 333 2    34444333333344578999999999999999999999998754 789


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ++||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        94 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           94 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKL  166 (327)
T ss_dssp             EEECCTTCBHHHHHHHS----TTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred             EEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence            99999999999999763    367999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          216 IPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       216 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ....... ......+|+.|+|||.+.+..++.++|||||||++|||++.|+.||.....     ..    .......+..
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~----~~~~~~~~~~  237 (327)
T 3poz_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SE----ISSILEKGER  237 (327)
T ss_dssp             HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GG----HHHHHHTTCC
T ss_pred             ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH-----HH----HHHHHHcCCC
Confidence            6543322 223455788999999999999999999999999999999339999974322     11    1122221111


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      .  ..        ....+..+.+++.+||+.+|++|||+.++++.|+++.+
T Consensus       238 ~--~~--------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~  278 (327)
T 3poz_A          238 L--PQ--------PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             C--CC--------CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred             C--CC--------CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            0  00        11224468899999999999999999999999998864


No 69 
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00  E-value=8.1e-47  Score=347.05  Aligned_cols=263  Identities=18%  Similarity=0.245  Sum_probs=205.5

Q ss_pred             hccCCCCCeecccCceEEEEEEeC------Cce-EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLP------DRT-ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~-~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      .++|...+.||+|+||+||+|.+.      ++. +|+|++...........+.+|+.++++++||||+++++++.++...
T Consensus        70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  149 (367)
T 3l9p_A           70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR  149 (367)
T ss_dssp             GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence            467888899999999999999952      333 4444444333444556789999999999999999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC---ceEEe
Q 045067          134 VLVFESAEYGNLHDLLKRSYQ--SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLF  208 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~---~~kl~  208 (347)
                      ++||||+++|+|.+++.....  .....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++   .+||+
T Consensus       150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~  226 (367)
T 3l9p_A          150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG  226 (367)
T ss_dssp             EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred             EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEEC
Confidence            999999999999999987521  12245899999999999999999999   99999999999999999555   59999


Q ss_pred             cCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHH
Q 045067          209 NFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKK  287 (347)
Q Consensus       209 Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  287 (347)
                      |||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++.|.+||.....        ......
T Consensus       227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--------~~~~~~  298 (367)
T 3l9p_A          227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLEF  298 (367)
T ss_dssp             CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHHH
T ss_pred             CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHH
Confidence            9999875422111 1123356789999999999999999999999999999999449999964321        122222


Q ss_pred             HHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ....... .          .....+..+.+++.+||+.+|++|||+.+|++.|+.+.+
T Consensus       299 i~~~~~~-~----------~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          299 VTSGGRM-D----------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HHTTCCC-C----------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHcCCCC-C----------CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            2221111 0          011224467899999999999999999999999998865


No 70 
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00  E-value=4.9e-47  Score=357.74  Aligned_cols=265  Identities=23%  Similarity=0.298  Sum_probs=204.9

Q ss_pred             HHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           54 AKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        54 ~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      ...++...++|...+.||+|+||.||+|.+.++..+++|....... ..+.+.+|+.++++++||||+++++++.+ +..
T Consensus       176 ~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          176 KDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             TTCSBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred             ccccccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-Cce
Confidence            4445556678888999999999999999995544455555554332 23779999999999999999999999876 678


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ++||||+++|+|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++
T Consensus       254 ~iv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a  327 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA  327 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTT
T ss_pred             EEEehhhcCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccc
Confidence            9999999999999999753   1245899999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      +..............+++.|+|||.+.+..++.++|||||||++|||++.|+.||.....        ....... ..+.
T Consensus       328 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--------~~~~~~i-~~~~  398 (452)
T 1fmk_A          328 RLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQV-ERGY  398 (452)
T ss_dssp             C--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HHHHHHH-HTTC
T ss_pred             eecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-HcCC
Confidence            876543332233455788999999999899999999999999999999449999964321        1222222 2211


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      .       ...   +...+..+.+++.+||+.||++|||+.+|++.|+++..
T Consensus       399 ~-------~~~---~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          399 R-------MPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             C-------CCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             C-------CCC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            0       000   11234568899999999999999999999999998864


No 71 
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00  E-value=7.6e-46  Score=342.23  Aligned_cols=253  Identities=17%  Similarity=0.182  Sum_probs=206.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..+.|...+.||+|+||.||+|.. .++.++++|+...........+.+|+.++++++||||+++++++.+....++|||
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            356799999999999999999999 5667777777766555555678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC--CCceEEecCCCCccC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE--RYVPKLFNFSLSASI  216 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~a~~~  216 (347)
                      |+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.  ++.+||+|||++...
T Consensus       129 ~~~gg~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~  201 (387)
T 1kob_A          129 FLSGGELFDRIAAE----DYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL  201 (387)
T ss_dssp             CCCCCBHHHHTTCT----TCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEEC
T ss_pred             cCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceec
Confidence            99999999999753    256999999999999999999999   999999999999999974  578999999999876


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      .....  .....||+.|+|||++.+..++.++|||||||++|+|+ +|..||.....        ........... .. 
T Consensus       202 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tg~~Pf~~~~~--------~~~~~~i~~~~-~~-  268 (387)
T 1kob_A          202 NPDEI--VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL-SGLSPFAGEDD--------LETLQNVKRCD-WE-  268 (387)
T ss_dssp             CTTSC--EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH-HSCCSSCCSSH--------HHHHHHHHHCC-CC-
T ss_pred             CCCcc--eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHH-hCCCCCCCCCH--------HHHHHHHHhCC-CC-
Confidence            54432  23357999999999999999999999999999999999 89999964321        12222222211 10 


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       .++     ......+.++.+++.+||+.||++|||+.|+++
T Consensus       269 -~~~-----~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          269 -FDE-----DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             -CCS-----STTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -CCc-----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence             011     111123456889999999999999999999986


No 72 
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00  E-value=1e-46  Score=344.11  Aligned_cols=249  Identities=18%  Similarity=0.251  Sum_probs=197.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  134 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|++...   .....+.+.+|..++..+ +||||+++++++.+.+.++
T Consensus        21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~  100 (353)
T 3txo_A           21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF  100 (353)
T ss_dssp             --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence            357899999999999999999998 55555555555432   122346688999999988 7999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||+++|+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus       101 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~  172 (353)
T 3txo_A          101 FVMEFVNGGDLMFHIQKS-----RRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK  172 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEcccccee
Confidence            999999999999999875     67999999999999999999999   9999999999999999999999999999997


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ...... ......+||+.|+|||++.+..++.++||||+||++|||+ +|++||.....        ............ 
T Consensus       173 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~G~~Pf~~~~~--------~~~~~~i~~~~~-  241 (353)
T 3txo_A          173 EGICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML-CGHAPFEAENE--------DDLFEAILNDEV-  241 (353)
T ss_dssp             CSCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHCCC-
T ss_pred             ecccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHH-hCCCCCCCCCH--------HHHHHHHHcCCC-
Confidence            643322 2234567999999999999889999999999999999999 89999964321        222333322211 


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCH------HHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTM------IDVAK  338 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~------~ell~  338 (347)
                         ..+        ...+..+.+++.+||+.||++||++      .|+++
T Consensus       242 ---~~p--------~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          242 ---VYP--------TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             ---CCC--------TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             ---CCC--------CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence               001        1124467899999999999999998      66654


No 73 
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00  E-value=9.1e-46  Score=332.59  Aligned_cols=264  Identities=17%  Similarity=0.153  Sum_probs=198.7

Q ss_pred             HHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ...++|...+.||+|+||+||+|...++..+++|.+....  ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus        18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   97 (311)
T 3niz_A           18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV   97 (311)
T ss_dssp             CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred             chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence            3457899999999999999999999445444444443322  22346788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++ +|.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        98 ~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~  169 (311)
T 3niz_A           98 FEFMEK-DLKKVLDEN----KTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAF  169 (311)
T ss_dssp             EECCSE-EHHHHHHTC----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEET
T ss_pred             EcCCCC-CHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceec
Confidence            999985 888888653    356999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ..... ......||+.|+|||++.+ ..++.++||||+||++|+|+ +|++||.....     .................
T Consensus       170 ~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~  242 (311)
T 3niz_A          170 GIPVR-SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMI-TGKPLFPGVTD-----DDQLPKIFSILGTPNPR  242 (311)
T ss_dssp             TSCCC----CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH-HSSCSCCCSST-----TTHHHHHHHHHCCCCTT
T ss_pred             CCCcc-cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHH-hCCCCCCCCCh-----HHHHHHHHHHHCCCChH
Confidence            53322 2234578999999998876 57899999999999999999 89999975332     11111111111111000


Q ss_pred             ---c-------------ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 ---G-------------IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ---~-------------~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                         .             ..... ......+....++.+++.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          243 EWPQVQELPLWKQRTFQVFEKK-PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             TSGGGTTSHHHHSCCCCCCCCC-CHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HhhhhhccchhhhcccccccCC-cHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence               0             00000 000111123457889999999999999999999987


No 74 
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00  E-value=3.6e-46  Score=340.78  Aligned_cols=256  Identities=17%  Similarity=0.199  Sum_probs=201.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC-----CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS-----VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      ..+.|...+.||+|+||+||+|.. .++..+++|++...     .....+.+.+|+.+++.++||||+++++++.+++..
T Consensus        22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  101 (351)
T 3c0i_A           22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML  101 (351)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            346799999999999999999998 45555555544321     112347789999999999999999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc---eEEecC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV---PKLFNF  210 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~---~kl~Df  210 (347)
                      ++||||+++|+|.+.+.... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.   +||+||
T Consensus       102 ~lv~e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Df  177 (351)
T 3c0i_A          102 YMVFEFMDGADLCFEIVKRA-DAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGF  177 (351)
T ss_dssp             EEEEECCSSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCC
T ss_pred             EEEEeCCCCCCHHHHHHHhc-ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecC
Confidence            99999999999998886531 12245899999999999999999999   999999999999999986654   999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      |++........ ......||+.|+|||++.+..++.++||||+||++|+|+ +|..||....         .........
T Consensus       178 g~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~---------~~~~~~i~~  246 (351)
T 3c0i_A          178 GVAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL-SGCLPFYGTK---------ERLFEGIIK  246 (351)
T ss_dssp             TTCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCSSH---------HHHHHHHHH
T ss_pred             cceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHH-HCCCCCCCcH---------HHHHHHHHc
Confidence            99987654332 234467999999999999999999999999999999999 8999996421         112222222


Q ss_pred             ccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 NRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . ...  .     ........+..+.+++.+||+.||++|||+.|+++
T Consensus       247 ~-~~~--~-----~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          247 G-KYK--M-----NPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             T-CCC--C-----CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             C-CCC--C-----CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            1 110  0     01111223557889999999999999999999985


No 75 
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00  E-value=3.9e-46  Score=328.12  Aligned_cols=252  Identities=23%  Similarity=0.309  Sum_probs=192.7

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .++|...+.||+|+||.||+|.+.+..+++|.......   ....+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM   85 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred             hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence            35788889999999999999999866666665543322   223467899999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC---eEeccCCCCCeEECC--------CCceE
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP---IVFRDLKSSYILVSE--------RYVPK  206 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~---ivH~dlkp~Nill~~--------~~~~k  206 (347)
                      ||+++++|.+++..      ..+++..+..++.|++.||.|||   +.+   |+||||||+||+++.        ++.+|
T Consensus        86 e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH---~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           86 EFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLH---DEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             ECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHH---HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             EcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---hCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            99999999999965      57999999999999999999999   777   999999999999986        77899


Q ss_pred             EecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          207 LFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       207 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      |+|||++........   ....||+.|+|||.+.+..++.++||||+|+++|+|+ +|+.||.....        .....
T Consensus       157 l~Dfg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~--------~~~~~  224 (271)
T 3dtc_A          157 ITDFGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELL-TGEVPFRGIDG--------LAVAY  224 (271)
T ss_dssp             ECCCCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHH-HCCCTTTTSCH--------HHHHH
T ss_pred             EccCCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHH
Confidence            999999976543322   2357899999999999999999999999999999999 89999964321        11111


Q ss_pred             HHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 045067          287 KYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKM  343 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i  343 (347)
                      ...... ...    ..     ....+..+.+++.+||+.||++|||+.|+++.|++|
T Consensus       225 ~~~~~~-~~~----~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          225 GVAMNK-LAL----PI-----PSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHTSC-CCC----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             hhhcCC-CCC----CC-----CcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            111111 110    00     112245688999999999999999999999999864


No 76 
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00  E-value=2.2e-46  Score=339.56  Aligned_cols=246  Identities=21%  Similarity=0.270  Sum_probs=197.6

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.+ .++..+++|++....   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            35788999999999999999998 555555555443221   12235788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+ +|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus        88 ~E~~-~g~l~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~  158 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK-----KRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIM  158 (336)
T ss_dssp             ECCC-CEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTT
T ss_pred             EECC-CCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceec
Confidence            9999 57999998765     67999999999999999999999   999999999999999999999999999999776


Q ss_pred             CCCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .....  ....+||+.|+|||++.+..+ ++++||||+||++|+|+ +|+.||.......                 ...
T Consensus       159 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~Pf~~~~~~~-----------------~~~  218 (336)
T 3h4j_B          159 TDGNF--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVML-VGRLPFDDEFIPN-----------------LFK  218 (336)
T ss_dssp             TTSBT--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHH-HSSCSSBCSSSTT-----------------CBC
T ss_pred             cCCcc--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHH-hCCCCCCCccHHH-----------------HHH
Confidence            54322  234679999999999988765 78999999999999999 9999997532210                 000


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .+......   .+...++.+.+++.+||+.||.+|||+.|+++
T Consensus       219 ~i~~~~~~---~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          219 KVNSCVYV---MPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             CCCSSCCC---CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHHcCCCC---CcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            11111110   11123456789999999999999999999975


No 77 
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00  E-value=1.4e-46  Score=349.18  Aligned_cols=258  Identities=16%  Similarity=0.196  Sum_probs=206.9

Q ss_pred             HHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeC
Q 045067           55 KELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV  130 (347)
Q Consensus        55 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  130 (347)
                      .++....++|...+.||+|+||+||+|.. .++.++++|++....   ....+.+.+|+.+++.++||||+++++++.++
T Consensus        62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~  141 (410)
T 3v8s_A           62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD  141 (410)
T ss_dssp             HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence            34555678999999999999999999999 556666666654311   11224588999999999999999999999999


Q ss_pred             CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecC
Q 045067          131 EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF  210 (347)
Q Consensus       131 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  210 (347)
                      +.+++||||++||+|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       142 ~~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DF  212 (410)
T 3v8s_A          142 RYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADF  212 (410)
T ss_dssp             SEEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEecc
Confidence            999999999999999999976      46899999999999999999999   999999999999999999999999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccCC----CCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGY----LNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      |+++.............+||+.|+|||++.+..    ++.++|||||||++|||+ +|++||.....        .....
T Consensus       213 G~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell-~G~~Pf~~~~~--------~~~~~  283 (410)
T 3v8s_A          213 GTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEML-VGDTPFYADSL--------VGTYS  283 (410)
T ss_dssp             TTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHH-HSSCTTCCSSH--------HHHHH
T ss_pred             ceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHH-hCCCCCCCCCh--------hhHHH
Confidence            999877655444445678999999999887654    789999999999999999 89999964321        22222


Q ss_pred             HHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCC--CCCHHHHHH
Q 045067          287 KYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAED--RPTMIDVAK  338 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~--RPs~~ell~  338 (347)
                      ...........  +.      ....+.++.+|+.+||+.+|.+  ||++.|+++
T Consensus       284 ~i~~~~~~~~~--p~------~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          284 KIMNHKNSLTF--PD------DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHTHHHHCCC--CT------TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             HHHhccccccC--CC------cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            22221100000  00      0112456789999999999988  999999875


No 78 
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00  E-value=5.6e-46  Score=334.68  Aligned_cols=245  Identities=21%  Similarity=0.296  Sum_probs=201.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|++....   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv   84 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   84 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence            36788999999999999999999 556666666554321   12346688999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus        85 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~  156 (318)
T 1fot_A           85 MDYIEGGELFSLLRKS-----QRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV  156 (318)
T ss_dssp             ECCCCSCBHHHHHHHT-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEEC
T ss_pred             EeCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceec
Confidence            9999999999999874     67999999999999999999999   999999999999999999999999999999875


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ...    ....+||+.|+|||++.+..++.++||||+||++|||+ +|.+||....        ............ .  
T Consensus       157 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~--------~~~~~~~i~~~~-~--  220 (318)
T 1fot_A          157 PDV----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEML-AGYTPFYDSN--------TMKTYEKILNAE-L--  220 (318)
T ss_dssp             SSC----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHH-HSSCTTCCSS--------HHHHHHHHHHCC-C--
T ss_pred             CCc----cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHH-hCCCCCCCCC--------HHHHHHHHHhCC-C--
Confidence            432    23467999999999999999999999999999999999 8999996432        122222332221 1  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-----TMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-----s~~ell~  338 (347)
                          ...     ...+.++.+++.+||+.||++||     ++.|+++
T Consensus       221 ----~~p-----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          221 ----RFP-----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             ----CCC-----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             ----CCC-----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence                010     12245678999999999999999     8888874


No 79 
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00  E-value=3.4e-46  Score=330.44  Aligned_cols=259  Identities=22%  Similarity=0.313  Sum_probs=202.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-C---CceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-P---DRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~---~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      ..++|...+.||+|+||+||+|.+ .   .+..+++|..... .....+.+.+|+.++++++||||+++++++.+ +..+
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~   88 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW   88 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence            356788999999999999999987 2   2234555555443 44455789999999999999999999999865 4578


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++.
T Consensus        89 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  161 (281)
T 3cc6_A           89 IIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSR  161 (281)
T ss_dssp             EEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGG
T ss_pred             EEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCc
Confidence            999999999999999764    256899999999999999999999   9999999999999999999999999999998


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ..............+|+.|+|||.+.+..++.++||||||+++|+|++.|+.||.....     ...   ... ...+..
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~-----~~~---~~~-~~~~~~  232 (281)
T 3cc6_A          162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-----KDV---IGV-LEKGDR  232 (281)
T ss_dssp             CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG-----GGH---HHH-HHHTCC
T ss_pred             ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh-----HHH---HHH-HhcCCC
Confidence            76554433334456788999999999899999999999999999999339999964322     111   111 111111


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ..  .+        ...++.+.+++.+||+.||++|||+.|+++.|+++.+
T Consensus       233 ~~--~~--------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~  273 (281)
T 3cc6_A          233 LP--KP--------DLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ  273 (281)
T ss_dssp             CC--CC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CC--CC--------CCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence            00  00        1124568899999999999999999999999999865


No 80 
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00  E-value=8.5e-46  Score=332.18  Aligned_cols=256  Identities=20%  Similarity=0.339  Sum_probs=196.3

Q ss_pred             ccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeCC
Q 045067           62 NNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE  141 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  141 (347)
                      ++|...+.||+|+||+||+|.+.+..+++|++...   ...+.+.+|+.++++++||||+++++++.  +..++||||++
T Consensus         8 ~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~   82 (307)
T 2eva_A            8 KEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAE   82 (307)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCT
T ss_pred             hHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCC
Confidence            56888899999999999999998777766665432   33477999999999999999999999887  45899999999


Q ss_pred             CCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc-eEEecCCCCccCCCCC
Q 045067          142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV-PKLFNFSLSASIPEGE  220 (347)
Q Consensus       142 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~-~kl~Dfg~a~~~~~~~  220 (347)
                      +|+|.+++....  ....+++..+..++.|++.||+|||+....+|+||||||+||+++.++. +||+|||++.......
T Consensus        83 ~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~  160 (307)
T 2eva_A           83 GGSLYNVLHGAE--PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM  160 (307)
T ss_dssp             TCBHHHHHHCSS--SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC--------
T ss_pred             CCCHHHHHhccC--CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc
Confidence            999999997631  1134789999999999999999999211189999999999999998886 7999999987654322


Q ss_pred             ceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCC
Q 045067          221 TYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDP  300 (347)
Q Consensus       221 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (347)
                          ....||+.|+|||.+.+..++.++||||||+++|+|+ +|+.||.....    .  ........ ..+....    
T Consensus       161 ----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~----~--~~~~~~~~-~~~~~~~----  224 (307)
T 2eva_A          161 ----TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI-TRRKPFDEIGG----P--AFRIMWAV-HNGTRPP----  224 (307)
T ss_dssp             --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHH-HTCCTTTTTCS----S--HHHHHHHH-HTTCCCC----
T ss_pred             ----ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHH-HCCCCchhhCc----c--HHHHHHHH-hcCCCCC----
Confidence                2346899999999999999999999999999999999 89999964321    1  11111111 1111111    


Q ss_pred             ccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          301 RIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       301 ~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                       .     ....+..+.+++.+||+.||++|||+.++++.|+.+.+.
T Consensus       225 -~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  264 (307)
T 2eva_A          225 -L-----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRY  264 (307)
T ss_dssp             -C-----BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGG
T ss_pred             -c-----ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence             1     112245678999999999999999999999999998764


No 81 
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00  E-value=9.1e-46  Score=332.45  Aligned_cols=268  Identities=21%  Similarity=0.337  Sum_probs=211.4

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe------CCceEEEEEEccC-CCchhHHHHHHHHHHHHhc-CCCceeeeeeeeee
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL------PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLE  129 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  129 (347)
                      ....++|...+.||+|+||.||+|.+      .++..+++|.... ......+.+.+|+.+++++ +||||+++++++.+
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   98 (313)
T 1t46_A           19 EFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTI   98 (313)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             ccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec
Confidence            33456788999999999999999984      3445555555544 3334557799999999999 89999999999999


Q ss_pred             CCccEEEEEeCCCCCHHHHHhhhcc-------------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCC
Q 045067          130 VEIPVLVFESAEYGNLHDLLKRSYQ-------------SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSY  196 (347)
Q Consensus       130 ~~~~~lv~e~~~~g~L~~~l~~~~~-------------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~N  196 (347)
                      ++..++||||+++|+|.+++.....             .....+++..+..++.|++.||.|||   +.+|+||||||+|
T Consensus        99 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~N  175 (313)
T 1t46_A           99 GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARN  175 (313)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGG
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccce
Confidence            9999999999999999999986421             01225899999999999999999999   9999999999999


Q ss_pred             eEECCCCceEEecCCCCccCCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCC
Q 045067          197 ILVSERYVPKLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLN  275 (347)
Q Consensus       197 ill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~  275 (347)
                      |+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|+|++.|..||.....  
T Consensus       176 il~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--  253 (313)
T 1t46_A          176 ILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV--  253 (313)
T ss_dssp             EEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS--
T ss_pred             EEEcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc--
Confidence            99999999999999999877654332 223456788999999999999999999999999999999449999965321  


Q ss_pred             CCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          276 GDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                           . ........... ....         ....+..+.+++.+||+.||.+|||+.|+++.|+++.++
T Consensus       254 -----~-~~~~~~~~~~~-~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  308 (313)
T 1t46_A          254 -----D-SKFYKMIKEGF-RMLS---------PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (313)
T ss_dssp             -----S-HHHHHHHHHTC-CCCC---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -----h-hHHHHHhccCC-CCCC---------cccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence                 1 11111222111 1000         012245688999999999999999999999999998764


No 82 
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=1.1e-45  Score=329.75  Aligned_cols=259  Identities=20%  Similarity=0.269  Sum_probs=203.1

Q ss_pred             cCCCCCeecccCceEEEEEEe-CCc----eEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc-EEE
Q 045067           63 NYHYRNIITESSIFRLCQGVL-PDR----TISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP-VLV  136 (347)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~----~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-~lv  136 (347)
                      .|...+.||+|+||+||+|.+ +++    .+++|+..........+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v  101 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL  101 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence            344568899999999999997 322    34444444444445567899999999999999999999999876655 999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      +||+.+|+|.+++...    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+||+|||++...
T Consensus       102 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A          102 LPYMCHGDLLQFIRSP----QRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI  174 (298)
T ss_dssp             ECCCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTT
T ss_pred             EecccCCCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccc
Confidence            9999999999999762    367899999999999999999999   999999999999999999999999999999765


Q ss_pred             CCCCc---eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          217 PEGET---YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       217 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      .....   .......+|+.|+|||.+.+..++.++||||||+++|+|++.+.+||.....     .   .. ........
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~-----~---~~-~~~~~~~~  245 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP-----F---DL-THFLAQGR  245 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG-----G---GH-HHHHHTTC
T ss_pred             cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH-----H---HH-HHHhhcCC
Confidence            43321   1123456789999999999999999999999999999999557777754322     1   11 11111111


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                      ...       .   ....+..+.+++.+||+.||.+|||+.++++.|+++.+++
T Consensus       246 ~~~-------~---~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l  289 (298)
T 3pls_A          246 RLP-------Q---PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSAL  289 (298)
T ss_dssp             CCC-------C---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             CCC-------C---CccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHH
Confidence            000       0   1122456889999999999999999999999999998764


No 83 
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00  E-value=5.4e-46  Score=332.35  Aligned_cols=266  Identities=20%  Similarity=0.226  Sum_probs=204.4

Q ss_pred             ccCCCCCeecccCceEEEEEEe-----CCce-EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC--Ccc
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-----PDRT-ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV--EIP  133 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~-~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~  133 (347)
                      +.|...+.||+|+||.||+|.+     .++. +++|++.........+.+.+|+.++++++||||+++++++.+.  ...
T Consensus        21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~  100 (302)
T 4e5w_A           21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI  100 (302)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred             hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence            4578889999999999999983     3444 4555444344444457799999999999999999999999876  678


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ++||||+++|+|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+||+++.++.+||+|||++
T Consensus       101 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~  173 (302)
T 4e5w_A          101 KLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLT  173 (302)
T ss_dssp             EEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccc
Confidence            9999999999999999653    256999999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCce--eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCcc------CCCCCchHHHHH
Q 045067          214 ASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLR------LNGDESFEMDFV  285 (347)
Q Consensus       214 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~------~~~~~~~~~~~~  285 (347)
                      .........  ......+|..|+|||.+.+..++.++||||+|+++|+|+ +|..|+.....      ............
T Consensus       174 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  252 (302)
T 4e5w_A          174 KAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELL-TYCDSDSSPMALFLKMIGPTHGQMTVTRL  252 (302)
T ss_dssp             EECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH-TTTCGGGSHHHHHHHHHCSCCGGGHHHHH
T ss_pred             ccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHH-HccCCCcchhhHHhhccCCcccccCHHHH
Confidence            877654432  233466888999999999999999999999999999999 88888753211      001111111222


Q ss_pred             HHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ......+....          .....++.+.+++.+||+.||.+|||+.++++.|+++.+
T Consensus       253 ~~~~~~~~~~~----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~  302 (302)
T 4e5w_A          253 VNTLKEGKRLP----------CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK  302 (302)
T ss_dssp             HHHHHTTCCCC----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHHhccCCCC----------CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence            22222211100          111234568899999999999999999999999999863


No 84 
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00  E-value=4.6e-46  Score=332.30  Aligned_cols=261  Identities=23%  Similarity=0.393  Sum_probs=203.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-Cc--e-EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeee-eCCccE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DR--T-ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCL-EVEIPV  134 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~--~-~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-~~~~~~  134 (347)
                      ...|...+.||+|+||+||+|.+ + ++  . +++|+..........+.+.+|+.++++++||||+++++++. .++..+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            34577889999999999999997 2 21  2 44444444444455678999999999999999999999865 456889


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++.
T Consensus       104 ~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~  176 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLAR  176 (298)
T ss_dssp             EEEECCTTCBHHHHHHCT----TCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGC
T ss_pred             EEEeCCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECcccccc
Confidence            999999999999999752    356899999999999999999999   9999999999999999999999999999998


Q ss_pred             cCCCCCc---eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhc
Q 045067          215 SIPEGET---YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIEN  291 (347)
Q Consensus       215 ~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      .......   .......+|+.|+|||.+.+..++.++||||+|+++|+|++.+.+||.....    .    .........
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~----~----~~~~~~~~~  248 (298)
T 3f66_A          177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----F----DITVYLLQG  248 (298)
T ss_dssp             CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT----T----THHHHHHTT
T ss_pred             cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH----H----HHHHHHhcC
Confidence            7654322   1123456788999999999999999999999999999999548888864322    1    111111111


Q ss_pred             cCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                      ..   ...+        ...+..+.+++.+||+.+|++|||+.|+++.|+++.+++
T Consensus       249 ~~---~~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  293 (298)
T 3f66_A          249 RR---LLQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  293 (298)
T ss_dssp             CC---CCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTS
T ss_pred             CC---CCCC--------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence            10   0111        112346889999999999999999999999999998764


No 85 
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4e-46  Score=339.39  Aligned_cols=269  Identities=20%  Similarity=0.290  Sum_probs=207.2

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEe------CCceEEEEEEccC-CCchhHHHHHHHHHHHHhc-CCCceeeeeeeee
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVL------PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCL  128 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  128 (347)
                      ++...++|...+.||+|+||.||+|.+      .++..+++|.... ......+.+.+|+.++.++ +||||+++++++.
T Consensus        40 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~  119 (344)
T 1rjb_A           40 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  119 (344)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            344567899999999999999999996      2334455554443 3334457799999999999 8999999999999


Q ss_pred             eCCccEEEEEeCCCCCHHHHHhhhccC------------------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEec
Q 045067          129 EVEIPVLVFESAEYGNLHDLLKRSYQS------------------HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFR  190 (347)
Q Consensus       129 ~~~~~~lv~e~~~~g~L~~~l~~~~~~------------------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~  190 (347)
                      +++..++||||+++|+|.+++......                  ....+++..+..++.|++.||.|||   +.+|+||
T Consensus       120 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~  196 (344)
T 1rjb_A          120 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHR  196 (344)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEET
T ss_pred             eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccC
Confidence            999999999999999999999764110                  0134799999999999999999999   9999999


Q ss_pred             cCCCCCeEECCCCceEEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccc
Q 045067          191 DLKSSYILVSERYVPKLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFN  269 (347)
Q Consensus       191 dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~  269 (347)
                      ||||+|||++.++.+||+|||++........ .......+|+.|+|||.+.+..++.++|||||||++|+|++.|..||.
T Consensus       197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~  276 (344)
T 1rjb_A          197 DLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP  276 (344)
T ss_dssp             TCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred             CCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence            9999999999999999999999976654332 223445678899999999989999999999999999999944999996


Q ss_pred             cCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          270 MGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ....       . .........+...     ..     +...+..+.+++.+||+.||.+|||+.++++.|+.+..+
T Consensus       277 ~~~~-------~-~~~~~~~~~~~~~-----~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  335 (344)
T 1rjb_A          277 GIPV-------D-ANFYKLIQNGFKM-----DQ-----PFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLAD  335 (344)
T ss_dssp             TCCC-------S-HHHHHHHHTTCCC-----CC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred             cCCc-------H-HHHHHHHhcCCCC-----CC-----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHH
Confidence            5321       1 1112222221110     00     112245688999999999999999999999999988653


No 86 
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00  E-value=6.4e-46  Score=335.61  Aligned_cols=257  Identities=18%  Similarity=0.311  Sum_probs=200.0

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCc-e----EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDR-T----ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~-~----~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++|...+.||+|+||+||+|.+ .++ .    +++|...........+.+.+|+.++++++||||+++++++. ++..++
T Consensus        13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~   91 (325)
T 3kex_A           13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL   91 (325)
T ss_dssp             TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred             hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence            4678889999999999999998 333 2    44444433333334466789999999999999999999986 466899


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus        92 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  164 (325)
T 3kex_A           92 VTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL  164 (325)
T ss_dssp             EEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGG
T ss_pred             EEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccc
Confidence            99999999999999763    257899999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          216 IPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       216 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ....... ......+|+.|+|||.+.+..++.++|||||||++|+|++.|..||.....     .   . .......+..
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~---~-~~~~~~~~~~  235 (325)
T 3kex_A          165 LPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRL-----A---E-VPDLLEKGER  235 (325)
T ss_dssp             SCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCT-----T---H-HHHHHHTTCB
T ss_pred             cCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCH-----H---H-HHHHHHcCCC
Confidence            7544322 234456788999999999999999999999999999999339999975322     1   1 1111221111


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                        ...+.        ..+..+.+++.+||+.||++|||+.++++.|+++.+
T Consensus       236 --~~~~~--------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~  276 (325)
T 3kex_A          236 --LAQPQ--------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR  276 (325)
T ss_dssp             --CCCCT--------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred             --CCCCC--------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence              01111        112346789999999999999999999999998854


No 87 
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00  E-value=5.2e-46  Score=342.45  Aligned_cols=250  Identities=17%  Similarity=0.234  Sum_probs=200.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|.+....   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv   93 (384)
T 4fr4_A           14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV   93 (384)
T ss_dssp             GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence            36788999999999999999999 556666666554321   22346788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+.+|+|.+++...     ..+++..+..++.|++.||.|||   +.||+||||||+|||++.++.+||+|||++...
T Consensus        94 ~e~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~  165 (384)
T 4fr4_A           94 VDLLLGGDLRYHLQQN-----VHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAML  165 (384)
T ss_dssp             ECCCTTEEHHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeec
Confidence            9999999999999864     67999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCccccccccc---CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYART---GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      .....  ....+||+.|+|||++.+   ..++.++|||||||++|+|+ +|+.||.....     ............. .
T Consensus       166 ~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ell-tG~~Pf~~~~~-----~~~~~~~~~~~~~-~  236 (384)
T 4fr4_A          166 PRETQ--ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELL-RGRRPYHIRSS-----TSSKEIVHTFETT-V  236 (384)
T ss_dssp             CTTCC--BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHH-HSSCSSCCCTT-----SCHHHHHHHHHHC-C
T ss_pred             cCCCc--eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHH-hCCCCCCCCCC-----ccHHHHHHHHhhc-c
Confidence            54322  345689999999998864   46899999999999999999 89999964322     1112222222111 1


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCC-HHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT-MIDVAK  338 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs-~~ell~  338 (347)
                      .      .     .+...+..+.+++.+||+.||.+||+ +.++.+
T Consensus       237 ~------~-----~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          237 V------T-----YPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             C------C-----CCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             c------C-----CCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            0      0     01122456889999999999999998 666653


No 88 
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00  E-value=1e-45  Score=330.20  Aligned_cols=249  Identities=20%  Similarity=0.270  Sum_probs=192.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCc--------------------------hhHHHHHHHHHHHH
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVF--------------------------DAYDCCFNNIVFAS  113 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~--------------------------~~~~~~~~E~~~l~  113 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|++.....                          ...+.+.+|+.+++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            46788999999999999999998 5555555555433211                          12356889999999


Q ss_pred             hcCCCceeeeeeeeee--CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 045067          114 QMSHNNVLRLIGCCLE--VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD  191 (347)
Q Consensus       114 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  191 (347)
                      +++||||+++++++.+  ....++||||+++++|.+++..      ..+++..+..++.|++.||.|||   +.+|+|||
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~D  162 (298)
T 2zv2_A           92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL------KPLSEDQARFYFQDLIKGIEYLH---YQKIIHRD  162 (298)
T ss_dssp             TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCC
T ss_pred             hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccC
Confidence            9999999999999986  5688999999999999886543      57999999999999999999999   99999999


Q ss_pred             CCCCCeEECCCCceEEecCCCCccCCCCCceeeccccccCCcccccccccCC---CCCccchHHHHHHHHHHHhcCCCcc
Q 045067          192 LKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGY---LNEKCDVYSFGLLLLQLLSTGEDLF  268 (347)
Q Consensus       192 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~el~~~g~~p~  268 (347)
                      |||+|||++.++.+||+|||++........ ......||+.|+|||.+.+..   ++.++|||||||++|+|+ +|+.||
T Consensus       163 lkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf  240 (298)
T 2zv2_A          163 IKPSNLLVGEDGHIKIADFGVSNEFKGSDA-LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFV-FGQCPF  240 (298)
T ss_dssp             CCGGGEEECTTSCEEECCCTTCEECSSSSC-EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHH-HSSCSS
T ss_pred             CCHHHEEECCCCCEEEecCCCccccccccc-cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHH-HCCCCC
Confidence            999999999999999999999987654332 234467999999999887654   478899999999999999 899999


Q ss_pred             ccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          269 NMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .....        ....... ...... .  +.      ....+..+.+++.+||+.||++|||+.|+++
T Consensus       241 ~~~~~--------~~~~~~~-~~~~~~-~--~~------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          241 MDERI--------MCLHSKI-KSQALE-F--PD------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             CCSSH--------HHHHHHH-HHCCCC-C--CS------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             CCccH--------HHHHHHH-hcccCC-C--CC------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            64221        1122222 111111 0  00      0122456789999999999999999999875


No 89 
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00  E-value=1.6e-45  Score=331.97  Aligned_cols=264  Identities=21%  Similarity=0.287  Sum_probs=205.0

Q ss_pred             CCCCCeecccCceEEEEEEe-----CCceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC--CccEE
Q 045067           64 YHYRNIITESSIFRLCQGVL-----PDRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV--EIPVL  135 (347)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-----~~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~~l  135 (347)
                      |...+.||+|+||+||++.+     .++..+++|... .......+.+.+|+.++++++||||+++++++.+.  ...++
T Consensus        33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l  112 (318)
T 3lxp_A           33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL  112 (318)
T ss_dssp             EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred             HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence            48889999999999998865     244445555444 43444557799999999999999999999999884  57899


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++..
T Consensus       113 v~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          113 VMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA  183 (318)
T ss_dssp             EECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEE
T ss_pred             EEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccc
Confidence            9999999999999976      45999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCce--eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccC------CCCCchHHHHHHH
Q 045067          216 IPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRL------NGDESFEMDFVKK  287 (347)
Q Consensus       216 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~------~~~~~~~~~~~~~  287 (347)
                      .......  ......+|+.|+|||.+.+..++.++||||||+++|+|+ +|..||......      .............
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  262 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL-THCDSSQSPPTKFLELIGIAQGQMTVLRLTE  262 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH-TTTCGGGSHHHHHHHHHCSCCHHHHHHHHHH
T ss_pred             ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHH-hCCCcccccchhhhhhhcccccchhHHHHHH
Confidence            7654332  223456888999999999989999999999999999999 999998643210      0000001111112


Q ss_pred             HHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                      ........          ......+..+.+++.+||+.||++|||+.|+++.|+++.++|
T Consensus       263 ~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~  312 (318)
T 3lxp_A          263 LLERGERL----------PRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY  312 (318)
T ss_dssp             HHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHhcccCC----------CCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhh
Confidence            22211110          011123457889999999999999999999999999998753


No 90 
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00  E-value=2.3e-46  Score=340.66  Aligned_cols=250  Identities=20%  Similarity=0.244  Sum_probs=201.3

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCc
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~  132 (347)
                      ....++|...+.||+|+||.||+|.. .++..+++|.+....   ....+.+.+|..++..+ +||||+++++++.+.+.
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~   92 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN   92 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence            44567899999999999999999999 556666666554321   22346688999999887 89999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        93 ~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~  164 (345)
T 1xjd_A           93 LFFVMEYLNGGDLMYHIQSC-----HKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGM  164 (345)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTT
T ss_pred             EEEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChh
Confidence            99999999999999999875     67999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      ++....... .....+||+.|+|||++.+..++.++||||+||++|||+ +|.+||.....        ...........
T Consensus       165 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~--------~~~~~~i~~~~  234 (345)
T 1xjd_A          165 CKENMLGDA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML-IGQSPFHGQDE--------EELFHSIRMDN  234 (345)
T ss_dssp             CBCCCCTTC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHCC
T ss_pred             hhhcccCCC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHh-cCCCCCCCCCH--------HHHHHHHHhCC
Confidence            976433222 234568999999999999999999999999999999999 89999964321        12222222211


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHH-HHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMI-DVA  337 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~-ell  337 (347)
                             +..     +...+.++.+++.+||+.||++||++. +++
T Consensus       235 -------~~~-----p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          235 -------PFY-----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             -------CCC-----CTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             -------CCC-----CcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence                   011     012245678999999999999999987 554


No 91 
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00  E-value=2e-45  Score=326.36  Aligned_cols=253  Identities=24%  Similarity=0.350  Sum_probs=197.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC-chh------HHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV-FDA------YDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~-~~~------~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      .++|...+.||+|+||+||+|.+ .++..+++|...... ...      .+.+.+|+.++++++||||+++++++.+.. 
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-   96 (287)
T 4f0f_A           18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-   96 (287)
T ss_dssp             STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred             hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence            36788899999999999999999 455555555543322 111      167899999999999999999999986544 


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCCeEECCCCc-----e
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP--IVFRDLKSSYILVSERYV-----P  205 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlkp~Nill~~~~~-----~  205 (347)
                       ++||||+++|+|.+.+...    ...+++..+..++.|++.||+|||   +.+  |+||||||+||+++.++.     +
T Consensus        97 -~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~ivH~dikp~Nil~~~~~~~~~~~~  168 (287)
T 4f0f_A           97 -RMVMEFVPCGDLYHRLLDK----AHPIKWSVKLRLMLDIALGIEYMQ---NQNPPIVHRDLRSPNIFLQSLDENAPVCA  168 (287)
T ss_dssp             -EEEEECCTTCBHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCSCCSGGGEEESCCCTTCSCCE
T ss_pred             -eEEEEecCCCCHHHHHhcc----cCCccHHHHHHHHHHHHHHHHHHH---hCCCCeecCCCCcceEEEeccCCCCceeE
Confidence             7999999999999988653    357999999999999999999999   888  999999999999988776     9


Q ss_pred             EEecCCCCccCCCCCceeeccccccCCccccccc--ccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHH
Q 045067          206 KLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYA--RTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMD  283 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  283 (347)
                      ||+|||++......    .....||+.|+|||.+  ....++.++||||+||++|+|+ +|+.||.....      ....
T Consensus       169 kl~Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~------~~~~  237 (287)
T 4f0f_A          169 KVADFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL-TGEGPFDEYSY------GKIK  237 (287)
T ss_dssp             EECCCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHH-HSSCTTTTCCC------CHHH
T ss_pred             EeCCCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHH-cCCCCCccccc------cHHH
Confidence            99999999754332    2346799999999988  3456789999999999999999 89999964321      1112


Q ss_pred             HHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 045067          284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKM  343 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i  343 (347)
                      .......... .    +..     ....++.+.+++.+||+.||++|||+.|+++.|+++
T Consensus       238 ~~~~~~~~~~-~----~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          238 FINMIREEGL-R----PTI-----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHHSCC-C----CCC-----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             HHHHHhccCC-C----CCC-----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            2222222211 1    111     112345688999999999999999999999999864


No 92 
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00  E-value=2.9e-46  Score=343.09  Aligned_cols=269  Identities=13%  Similarity=0.123  Sum_probs=200.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEeC-C-----ceEEEEEEccCCCchh-----------HHHHHHHHHHHHhcCCCceee
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLP-D-----RTISVVKFIDGSVFDA-----------YDCCFNNIVFASQMSHNNVLR  122 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~-----~~~~v~k~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~  122 (347)
                      ..++|...+.||+|+||+||+|.+. +     +..+++|+........           ...+..|+..+..++||||++
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~  112 (364)
T 3op5_A           33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK  112 (364)
T ss_dssp             TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred             CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence            4568999999999999999999983 2     2444555544432111           122344556667778999999


Q ss_pred             eeeeeeeC----CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeE
Q 045067          123 LIGCCLEV----EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYIL  198 (347)
Q Consensus       123 l~~~~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nil  198 (347)
                      +++++...    ...++||||+ +++|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nil  184 (364)
T 3op5_A          113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN----AKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLL  184 (364)
T ss_dssp             EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred             EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEE
Confidence            99998875    4589999999 89999999763    367999999999999999999999   999999999999999


Q ss_pred             EC--CCCceEEecCCCCccCCCCCce------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCcccc
Q 045067          199 VS--ERYVPKLFNFSLSASIPEGETY------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNM  270 (347)
Q Consensus       199 l~--~~~~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~  270 (347)
                      ++  .++.+||+|||+++........      ......||+.|+|||++.+..++.++|||||||++|||+ +|+.||..
T Consensus       185 l~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~-~g~~Pf~~  263 (364)
T 3op5_A          185 LNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL-TGHLPWED  263 (364)
T ss_dssp             EESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSCCTTGG
T ss_pred             EecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHH-hCCCCccc
Confidence            99  8899999999999776432211      112345999999999999999999999999999999999 89999975


Q ss_pred             CccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          271 GLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...    ............. .....+.++.+..    ...+.++.+++..||+.+|.+||++.+|++.|+++.++
T Consensus       264 ~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~  330 (364)
T 3op5_A          264 NLK----DPKYVRDSKIRYR-ENIASLMDKCFPA----ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKA  330 (364)
T ss_dssp             GTT----CHHHHHHHHHHHH-HCHHHHHHHHSCT----TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccc----CHHHHHHHHHHhh-hhHHHHHHHhccc----ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence            321    1111111111111 1111222211111    11245688999999999999999999999999998764


No 93 
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00  E-value=4.5e-46  Score=330.79  Aligned_cols=252  Identities=18%  Similarity=0.304  Sum_probs=200.7

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCc-------eEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDR-------TISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~-------~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      .++|...+.||+|+||+||+|.. .++       ..+++|..........+.+.+|+.++++++||||+++++++.+++.
T Consensus         7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   86 (289)
T 4fvq_A            7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE   86 (289)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred             hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence            35788889999999999999998 322       3455555555444555789999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc--------
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV--------  204 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~--------  204 (347)
                      .++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.        
T Consensus        87 ~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  159 (289)
T 4fvq_A           87 NILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPF  159 (289)
T ss_dssp             CEEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred             CEEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccce
Confidence            99999999999999999874    245999999999999999999999   999999999999999998887        


Q ss_pred             eEEecCCCCccCCCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHH
Q 045067          205 PKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMD  283 (347)
Q Consensus       205 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  283 (347)
                      +||+|||++......     ....+|+.|+|||.+.+ ..++.++|||||||++|+|++.+.+||.....        ..
T Consensus       160 ~kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~--------~~  226 (289)
T 4fvq_A          160 IKLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS--------QR  226 (289)
T ss_dssp             EEECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--------HH
T ss_pred             eeeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch--------HH
Confidence            999999998654322     23468899999998887 77899999999999999999446666643211        11


Q ss_pred             HHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ............    ..         .+.++.+++.+||+.||++|||+.++++.|+++..
T Consensus       227 ~~~~~~~~~~~~----~~---------~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~  275 (289)
T 4fvq_A          227 KLQFYEDRHQLP----AP---------KAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFT  275 (289)
T ss_dssp             HHHHHHTTCCCC----CC---------SSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-
T ss_pred             HHHHhhccCCCC----CC---------CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcC
Confidence            111111111111    11         12346799999999999999999999999998764


No 94 
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00  E-value=1.4e-45  Score=337.99  Aligned_cols=254  Identities=18%  Similarity=0.189  Sum_probs=191.1

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..++|...+.||+|+||+||++.. .++..+++|.+...... .+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e   96 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME   96 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence            356799999999999999999999 45555555554443222 2678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc--eEEecCCCCccC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV--PKLFNFSLSASI  216 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~a~~~  216 (347)
                      |+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.  +||+|||+++..
T Consensus        97 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~  168 (361)
T 3uc3_A           97 YASGGELYERICNA-----GRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSS  168 (361)
T ss_dssp             CCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---
T ss_pred             eCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccc
Confidence            99999999999765     67999999999999999999999   999999999999999987765  999999998754


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCc-cchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEK-CDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ....  ......||+.|+|||++.+..++.+ +||||+||++|+|+ +|+.||.....    ............... ..
T Consensus       169 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~----~~~~~~~~~~~~~~~-~~  240 (361)
T 3uc3_A          169 VLHS--QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVML-VGAYPFEDPEE----PRDYRKTIQRILSVK-YS  240 (361)
T ss_dssp             --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHH-HSSCSCC--------CCCHHHHHHHHHTTC-CC
T ss_pred             cccC--CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHH-hCCCCCCCCcc----HHHHHHHHHHHhcCC-CC
Confidence            3222  1234579999999999888777655 89999999999999 89999975322    111222222222211 10


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                            ....   ...++.+.+++.+||+.||++|||+.|+++.
T Consensus       241 ------~~~~---~~~s~~~~~li~~~L~~dP~~Rps~~ell~h  275 (361)
T 3uc3_A          241 ------IPDD---IRISPECCHLISRIFVADPATRISIPEIKTH  275 (361)
T ss_dssp             ------CCTT---SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             ------CCCc---CCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence                  0000   0123567899999999999999999999863


No 95 
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00  E-value=2e-45  Score=327.36  Aligned_cols=260  Identities=17%  Similarity=0.168  Sum_probs=194.5

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ++|+..+.||+|+||+||+|.. .++..+++|... .. .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   81 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence            4688889999999999999999 445544444443 32 23334678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++ +|.+.+...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++.....
T Consensus        82 ~~~~-~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~  153 (292)
T 3o0g_A           82 FCDQ-DLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGI  153 (292)
T ss_dssp             CCSE-EHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCS
T ss_pred             cCCC-CHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCC
Confidence            9986 666666542    267999999999999999999999   99999999999999999999999999999987643


Q ss_pred             CCceeeccccccCCcccccccccCC-CCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhc---cC-
Q 045067          219 GETYIDDGVKGTSGIVAPEYARTGY-LNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIEN---RG-  293 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~-  293 (347)
                      ... ......||+.|+|||++.+.. ++.++||||+||++|+|++++.++|....        ...........   .. 
T Consensus       154 ~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--------~~~~~~~i~~~~~~~~~  224 (292)
T 3o0g_A          154 PVR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--------VDDQLKRIFRLLGTPTE  224 (292)
T ss_dssp             CCS-CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--------HHHHHHHHHHHHCCCCT
T ss_pred             ccc-cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--------HHHHHHHHHHHhCCCCh
Confidence            322 223457899999999887665 89999999999999999944444454221        11222222211   00 


Q ss_pred             --cccc---cC--------CccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          294 --FNGI---VD--------PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       294 --~~~~---~~--------~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                        +...   .+        ............+..+.+++.+||+.||++|||+.|+++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          225 EQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence              0000   00        000000111233557889999999999999999999986


No 96 
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.1e-45  Score=333.36  Aligned_cols=259  Identities=20%  Similarity=0.281  Sum_probs=198.6

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CC-c----eEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PD-R----TISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~-~----~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ++|...+.||+|+||+||+|.. .+ +    .+++|.+...........+.+|+.++++++||||+++++++.+.+..++
T Consensus        44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  123 (333)
T 1mqb_A           44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI  123 (333)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred             HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence            4566678999999999999988 22 1    2555554443344445678999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++..
T Consensus       124 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~  196 (333)
T 1mqb_A          124 ITEYMENGALDKFLREK----DGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRV  196 (333)
T ss_dssp             EEECCTTEEHHHHHHHT----TTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred             EEeCCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence            99999999999999763    357999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCce--eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          216 IPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       216 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      .......  ......+|+.|+|||.+.+..++.++|||||||++|+|++.|..||.....        ...... ...+.
T Consensus       197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~~~-~~~~~  267 (333)
T 1mqb_A          197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--------HEVMKA-INDGF  267 (333)
T ss_dssp             --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHH-HHTTC
T ss_pred             hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--------HHHHHH-HHCCC
Confidence            6543221  122345678999999999999999999999999999999449999964321        122222 22211


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..       ..   ....+..+.+++.+||+.+|++|||+.++++.|+++.+.
T Consensus       268 ~~-------~~---~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  310 (333)
T 1mqb_A          268 RL-------PT---PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA  310 (333)
T ss_dssp             CC-------CC---CTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             cC-------CC---cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            00       00   112245688999999999999999999999999998753


No 97 
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=2.5e-45  Score=325.90  Aligned_cols=258  Identities=22%  Similarity=0.326  Sum_probs=204.4

Q ss_pred             ccCCCCC-eecccCceEEEEEEe---CCceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           62 NNYHYRN-IITESSIFRLCQGVL---PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        62 ~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ++|.... .||+|+||.||+|.+   +++..+++|.... ......+.+.+|+.++++++||||+++++++ ..+..++|
T Consensus         9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv   87 (287)
T 1u59_A            9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLV   87 (287)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEE
T ss_pred             HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEE
Confidence            4555555 899999999999986   2444455555444 3444567899999999999999999999999 55678999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++...
T Consensus        88 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~  160 (287)
T 1u59_A           88 MEMAGGGPLHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL  160 (287)
T ss_dssp             EECCTTEEHHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred             EEeCCCCCHHHHHHhC----CccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeee
Confidence            9999999999999652    356999999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCcee--eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          217 PEGETYI--DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       217 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      .......  .....+|+.|+|||.+.+..++.++||||||+++|+|++.|+.||.....        .... .....+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~-~~i~~~~~  231 (287)
T 1u59_A          161 GADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEVM-AFIEQGKR  231 (287)
T ss_dssp             TTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCT--------HHHH-HHHHTTCC
T ss_pred             ccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH--------HHHH-HHHhcCCc
Confidence            5443322  22345688999999999889999999999999999999339999964321        1111 12222111


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .     ..     +...+..+.+++.+||+.+|++|||+.++++.|+++..+
T Consensus       232 ~-----~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~  273 (287)
T 1u59_A          232 M-----EC-----PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  273 (287)
T ss_dssp             C-----CC-----CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             C-----CC-----CCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence            1     01     112345788999999999999999999999999999765


No 98 
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00  E-value=8e-46  Score=334.54  Aligned_cols=267  Identities=18%  Similarity=0.300  Sum_probs=194.7

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCce---EEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRT---ISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE  131 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~---~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  131 (347)
                      ....++|...+.||+|+||+||+|.+ .++.   .+++|.....  .....+.+.+|+.++++++||||+++++++....
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   98 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR   98 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence            34456799999999999999999998 3331   4445544432  3344578999999999999999999999998776


Q ss_pred             cc------EEEEEeCCCCCHHHHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc
Q 045067          132 IP------VLVFESAEYGNLHDLLKRSYQ-SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV  204 (347)
Q Consensus       132 ~~------~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~  204 (347)
                      ..      ++||||+++|+|.+++..... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.
T Consensus        99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~  175 (323)
T 3qup_A           99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMT  175 (323)
T ss_dssp             ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSC
T ss_pred             cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCC
Confidence            55      999999999999999976421 12236899999999999999999999   999999999999999999999


Q ss_pred             eEEecCCCCccCCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHH
Q 045067          205 PKLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMD  283 (347)
Q Consensus       205 ~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  283 (347)
                      +||+|||++......... ......+++.|+|||.+.+..++.++|||||||++|+|++.|.+||.....     .   .
T Consensus       176 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~---~  247 (323)
T 3qup_A          176 VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN-----A---E  247 (323)
T ss_dssp             EEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----G---G
T ss_pred             EEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh-----H---H
Confidence            999999999876543322 123345788999999999999999999999999999999449999975322     1   1


Q ss_pred             HHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ............           .....+..+.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       248 ~~~~~~~~~~~~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~  299 (323)
T 3qup_A          248 IYNYLIGGNRLK-----------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGH  299 (323)
T ss_dssp             HHHHHHTTCCCC-----------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHhcCCCCC-----------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            111111111100           0112345688999999999999999999999999998754


No 99 
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=3.3e-46  Score=343.40  Aligned_cols=259  Identities=22%  Similarity=0.373  Sum_probs=194.4

Q ss_pred             cCCCCCeecccCceEEEEEEe--CCc--eEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeee-CCccEEE
Q 045067           63 NYHYRNIITESSIFRLCQGVL--PDR--TISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE-VEIPVLV  136 (347)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~--~~~--~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~~lv  136 (347)
                      .|...+.||+|+||+||+|.+  +++  ..+++|... .......+.+.+|+.++++++||||+++++++.. ++..++|
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv  169 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV  169 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence            355567899999999999997  332  234455444 3344556789999999999999999999998754 5678999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus       170 ~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          170 LPYMKHGDLRNFIRNE----THNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDM  242 (373)
T ss_dssp             EECCTTCBHHHHHHCT----TCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred             EECCCCCCHHHHHhhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccc
Confidence            9999999999999763    356889999999999999999999   999999999999999999999999999999866


Q ss_pred             CCCCce---eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          217 PEGETY---IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       217 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ......   ......+|+.|+|||.+.+..++.++|||||||++|||++.|.+||.....    .. ..   ... ..+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~----~~-~~---~~~-~~~~  313 (373)
T 3c1x_A          243 YDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT----FD-IT---VYL-LQGR  313 (373)
T ss_dssp             ---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCS----SC-HH---HHH-HTTC
T ss_pred             cccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCH----HH-HH---HHH-HcCC
Confidence            433211   123355788999999999999999999999999999999558899865322    11 11   111 1111


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                        ....+        ...+..+.+++.+||+.+|++|||+.|+++.|+++..++
T Consensus       314 --~~~~p--------~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~  357 (373)
T 3c1x_A          314 --RLLQP--------EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTF  357 (373)
T ss_dssp             --CCCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             --CCCCC--------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence              01111        122456889999999999999999999999999998764


No 100
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00  E-value=2.5e-46  Score=339.61  Aligned_cols=270  Identities=19%  Similarity=0.187  Sum_probs=196.5

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHH--HhcCCCceeeeeeeeee-----CCcc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFA--SQMSHNNVLRLIGCCLE-----VEIP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l--~~l~h~niv~l~~~~~~-----~~~~  133 (347)
                      .++|...+.||+|+||.||+|..++..+|+|.+....    .+.+..|..++  ..++||||+++++++..     ....
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   87 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY   87 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred             hHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence            4678889999999999999998877766666654322    24445555554  45899999999985543     2367


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC---------CeEeccCCCCCeEECCCCc
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR---------PIVFRDLKSSYILVSERYV  204 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~---------~ivH~dlkp~Nill~~~~~  204 (347)
                      ++||||+++|+|.+++..      ...++..+..++.|++.||.|||   +.         +|+||||||+|||++.++.
T Consensus        88 ~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH---~~~~~~~~~~~~ivH~Dikp~Nill~~~~~  158 (336)
T 3g2f_A           88 LLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLH---TELPRGDHYKPAISHRDLNSRNVLVKNDGT  158 (336)
T ss_dssp             EEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHH---CCBCCGGGCBCCEECSSCSGGGEEECTTSC
T ss_pred             EEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHH---hhhccccccccceeecccccceEEEcCCCc
Confidence            899999999999999976      45689999999999999999999   88         9999999999999999999


Q ss_pred             eEEecCCCCccCCCCCc-------eeeccccccCCccccccccc-------CCCCCccchHHHHHHHHHHHhcCCCcc-c
Q 045067          205 PKLFNFSLSASIPEGET-------YIDDGVKGTSGIVAPEYART-------GYLNEKCDVYSFGLLLLQLLSTGEDLF-N  269 (347)
Q Consensus       205 ~kl~Dfg~a~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~el~~~g~~p~-~  269 (347)
                      +||+|||++........       .......||+.|+|||++.+       ..++.++|||||||++|||+ +|..|| .
T Consensus       159 ~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell-~g~~p~~~  237 (336)
T 3g2f_A          159 CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF-MRCTDLFP  237 (336)
T ss_dssp             EEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHH-TTBGGGST
T ss_pred             EEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHH-hcCCcCCC
Confidence            99999999987653221       11234569999999998876       45678899999999999999 665554 3


Q ss_pred             cCccCCCCCch--------HHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 045067          270 MGLRLNGDESF--------EMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK  341 (347)
Q Consensus       270 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~  341 (347)
                      ...........        .................+.....   .....+..+.+++.+||+.||++|||+.|+++.|+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~  314 (336)
T 3g2f_A          238 GESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK---ENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMA  314 (336)
T ss_dssp             TSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC---CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             ccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc---cccchHHHHHHHHHHHhcCChhhCcchHHHHHHHH
Confidence            32211111000        01111111111111111111111   11235667999999999999999999999999999


Q ss_pred             HHHHhC
Q 045067          342 KMYKSF  347 (347)
Q Consensus       342 ~i~~~~  347 (347)
                      ++...+
T Consensus       315 ~ll~~~  320 (336)
T 3g2f_A          315 ELMMIW  320 (336)
T ss_dssp             HHHHCC
T ss_pred             HHHHHH
Confidence            998754


No 101
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00  E-value=1.2e-45  Score=339.75  Aligned_cols=246  Identities=20%  Similarity=0.188  Sum_probs=195.8

Q ss_pred             CCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeCCCCCH
Q 045067           67 RNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGNL  145 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L  145 (347)
                      .+.||+|+||.||+|.. .++..+++|++........+.+.+|+.++++++||||+++++++.+.+..++||||+++|+|
T Consensus        94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A           94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred             ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence            56799999999999998 55666666666655545567899999999999999999999999999999999999999999


Q ss_pred             HHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE--CCCCceEEecCCCCccCCCCCcee
Q 045067          146 HDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV--SERYVPKLFNFSLSASIPEGETYI  223 (347)
Q Consensus       146 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~  223 (347)
                      .+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||+  +.++.+||+|||+++.......  
T Consensus       174 ~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--  244 (373)
T 2x4f_A          174 FDRIIDE----SYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--  244 (373)
T ss_dssp             HHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred             HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence            9998753    256999999999999999999999   9999999999999999  5778999999999987654432  


Q ss_pred             eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCccC
Q 045067          224 DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRII  303 (347)
Q Consensus       224 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (347)
                      .....||+.|+|||++.+..++.++|||||||++|||+ +|..||....        ..............  .      
T Consensus       245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~--------~~~~~~~i~~~~~~--~------  307 (373)
T 2x4f_A          245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL-SGLSPFLGDN--------DAETLNNILACRWD--L------  307 (373)
T ss_dssp             CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHH-HSSCTTCCSS--------HHHHHHHHHHTCCC--S------
T ss_pred             cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHH-hCCCCCCCCC--------HHHHHHHHHhccCC--C------
Confidence            23456999999999999999999999999999999999 8999996432        12222333222110  0      


Q ss_pred             CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          304 GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       304 ~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ........++++.+++.+||+.||++|||+.|+++
T Consensus       308 ~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          308 EDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             ChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            01111233567889999999999999999999987


No 102
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00  E-value=2.5e-45  Score=324.14  Aligned_cols=250  Identities=21%  Similarity=0.233  Sum_probs=201.3

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ..+.|...+.||+|+||.||+|.. .++ .+++|++... .....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   85 (277)
T 3f3z_A            7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKY-FVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM   85 (277)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGG-GCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhh-ccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence            456789999999999999999999 444 4555555443 2334578999999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE---CCCCceEEecCCCCc
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV---SERYVPKLFNFSLSA  214 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~a~  214 (347)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||++   +.++.++|+|||++.
T Consensus        86 e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~  157 (277)
T 3f3z_A           86 ELCTGGELFERVVHK-----RVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA  157 (277)
T ss_dssp             ECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             eccCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence            999999999999875     67999999999999999999999   9999999999999999   788999999999997


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      .......  .....||+.|+|||.+.+. ++.++||||+|+++|+|+ +|..||.....        .......... ..
T Consensus       158 ~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~-~g~~p~~~~~~--------~~~~~~~~~~-~~  224 (277)
T 3f3z_A          158 RFKPGKM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLL-CGYPPFSAPTD--------SEVMLKIREG-TF  224 (277)
T ss_dssp             ECCTTSC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHC-CC
T ss_pred             eccCccc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHH-HCCCCCCCCCH--------HHHHHHHHhC-CC
Confidence            7654332  2345799999999988654 899999999999999999 89999964321        1222222221 11


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .       .........++.+.+++.+||+.||++|||+.++++
T Consensus       225 ~-------~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          225 T-------FPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             C-------CCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             C-------CCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0       001111123457889999999999999999999985


No 103
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00  E-value=9e-46  Score=337.63  Aligned_cols=245  Identities=17%  Similarity=0.215  Sum_probs=201.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|++....   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv  119 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            36789999999999999999999 455555555554321   12346788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++..
T Consensus       120 ~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          120 MEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV  191 (350)
T ss_dssp             EECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceec
Confidence            9999999999999875     57999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ...    ....+||+.|+|||++.+..++.++|||||||++|||+ +|.+||....        ........... ..  
T Consensus       192 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~--------~~~~~~~i~~~-~~--  255 (350)
T 1rdq_E          192 KGR----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA-AGYPPFFADQ--------PIQIYEKIVSG-KV--  255 (350)
T ss_dssp             SSC----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSS--------HHHHHHHHHHC-CC--
T ss_pred             cCC----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHh-hCCCCCCCCC--------HHHHHHHHHcC-CC--
Confidence            432    23467999999999999999999999999999999999 8999996432        12222232222 11  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT-----MIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs-----~~ell~  338 (347)
                          ..     +...+..+.+++.+||+.||.+||+     +.|+++
T Consensus       256 ----~~-----p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          256 ----RF-----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             ----CC-----CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             ----CC-----CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence                01     0122456889999999999999998     787764


No 104
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00  E-value=2e-45  Score=326.85  Aligned_cols=262  Identities=20%  Similarity=0.270  Sum_probs=195.5

Q ss_pred             HhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..++|...+.||+|+||+||+|.+.+ .+++|.+.... .....+.+.+|+.++++++||||+++++++ .....++|||
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e   99 (289)
T 3og7_A           22 PDGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ   99 (289)
T ss_dssp             CTTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred             CccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence            35678999999999999999998744 35555554332 234457799999999999999999999965 5567899999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++.....
T Consensus       100 ~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  172 (289)
T 3og7_A          100 WCEGSSLYHHLHAS----ETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSR  172 (289)
T ss_dssp             CCCEEEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC-------
T ss_pred             ecCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceecccccc
Confidence            99999999999652    367999999999999999999999   99999999999999999999999999999876543


Q ss_pred             CC-ceeeccccccCCcccccccc---cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          219 GE-TYIDDGVKGTSGIVAPEYAR---TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       219 ~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      .. ........||+.|+|||.+.   +..++.++||||||+++|+|+ +|+.||.....        ..........+..
T Consensus       173 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~--------~~~~~~~~~~~~~  243 (289)
T 3og7_A          173 WSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELM-TGQLPYSNINN--------RDQIIEMVGRGSL  243 (289)
T ss_dssp             -----------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHH-HSSCTTSSCCC--------HHHHHHHHHHTSC
T ss_pred             ccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHH-HCCCCccccch--------HHHHHHHhccccc
Confidence            22 22223457999999999886   567889999999999999999 89999964322        1222222222222


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ......      .....+..+.+++.+||+.+|++|||+.++++.|+++.+
T Consensus       244 ~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~  288 (289)
T 3og7_A          244 SPDLSK------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR  288 (289)
T ss_dssp             CCCTTS------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred             Ccchhh------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence            111110      111234578899999999999999999999999999864


No 105
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00  E-value=8.4e-46  Score=335.80  Aligned_cols=269  Identities=18%  Similarity=0.314  Sum_probs=210.6

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEe-CCc------eEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeee
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVL-PDR------TISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCL  128 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~------~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  128 (347)
                      ++...++|...+.||+|+||.||+|.. ..+      .+++|.+.........+.+.+|+.+++++ +||||+++++++.
T Consensus        41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~  120 (333)
T 2i1m_A           41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACT  120 (333)
T ss_dssp             GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe
Confidence            444567899999999999999999998 222      35555554444444557799999999999 8999999999999


Q ss_pred             eCCccEEEEEeCCCCCHHHHHhhhcc---------CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE
Q 045067          129 EVEIPVLVFESAEYGNLHDLLKRSYQ---------SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV  199 (347)
Q Consensus       129 ~~~~~~lv~e~~~~g~L~~~l~~~~~---------~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill  199 (347)
                      +++..++||||+++|+|.+++.....         .....+++..+..++.|++.||.|||   +.+|+||||||+|||+
T Consensus       121 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          121 HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLL  197 (333)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEE
T ss_pred             cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEE
Confidence            99999999999999999999975311         01245899999999999999999999   9999999999999999


Q ss_pred             CCCCceEEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCC
Q 045067          200 SERYVPKLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDE  278 (347)
Q Consensus       200 ~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~  278 (347)
                      +.++.+||+|||++........ .......+|+.|+|||.+.+..++.++|||||||++|+|++.|.+||.....    .
T Consensus       198 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~----~  273 (333)
T 2i1m_A          198 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----N  273 (333)
T ss_dssp             EGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS----S
T ss_pred             CCCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch----h
Confidence            9999999999999976543322 2223456788999999999899999999999999999999449999964321    1


Q ss_pred             chHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                          ............  ...+        ...+..+.+++.+||+.||.+|||+.|+++.|+++.++
T Consensus       274 ----~~~~~~~~~~~~--~~~~--------~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~  327 (333)
T 2i1m_A          274 ----SKFYKLVKDGYQ--MAQP--------AFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQE  327 (333)
T ss_dssp             ----HHHHHHHHHTCC--CCCC--------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             ----HHHHHHHhcCCC--CCCC--------CCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHh
Confidence                111122222110  0001        11235678999999999999999999999999998653


No 106
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00  E-value=2.6e-45  Score=326.79  Aligned_cols=265  Identities=17%  Similarity=0.169  Sum_probs=201.2

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeee-eeCCccEEE
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCC-LEVEIPVLV  136 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv  136 (347)
                      ...++|...+.||+|+||+||+|.. .++..+++|+......  .+.+.+|+.+++.++|++++..++.+ .+++..++|
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv   83 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV   83 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence            3457899999999999999999998 5555555555433321  24588999999999988776665554 667788999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE---CCCCceEEecCCCC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV---SERYVPKLFNFSLS  213 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~a  213 (347)
                      |||+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||++
T Consensus        84 ~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           84 MELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             EECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             EEcc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            9999 88999999752    257999999999999999999999   9999999999999999   78899999999999


Q ss_pred             ccCCCCCce------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHH
Q 045067          214 ASIPEGETY------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKK  287 (347)
Q Consensus       214 ~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  287 (347)
                      .........      ......||+.|+|||.+.+..++.++|||||||++|+|+ +|+.||......... .........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~-~~~~~~~~~  233 (296)
T 4hgt_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN-LGSLPWQGLKAATKR-QKYERISEK  233 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCCSSSS-SHHHHHHHH
T ss_pred             eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHh-cCCCCCcccchhhhh-hhhhhhhcc
Confidence            876543321      123467999999999999999999999999999999999 999999764331111 111111111


Q ss_pred             HHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .... ..          .......+..+.+++.+||+.+|++|||+.++++.|+++.++
T Consensus       234 ~~~~-~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~  281 (296)
T 4hgt_A          234 KMST-PI----------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHHS-CH----------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccc-hh----------hhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence            1111 00          000112245788999999999999999999999999998764


No 107
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00  E-value=7e-47  Score=351.40  Aligned_cols=263  Identities=16%  Similarity=0.174  Sum_probs=207.1

Q ss_pred             cCHHHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeee
Q 045067           52 FSAKELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCC  127 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~  127 (347)
                      +.+.++....++|...+.||+|+||.||+|.. .++..+++|++.+..   ....+.+.+|..++..++||||+++++++
T Consensus        51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~  130 (412)
T 2vd5_A           51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF  130 (412)
T ss_dssp             HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred             hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence            34456666778999999999999999999999 556666666554321   12235588999999999999999999999


Q ss_pred             eeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEE
Q 045067          128 LEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL  207 (347)
Q Consensus       128 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl  207 (347)
                      .+.+.+|+||||+++|+|.+++.+.    +..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||
T Consensus       131 ~~~~~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL  203 (412)
T 2vd5_A          131 QDENYLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRL  203 (412)
T ss_dssp             ECSSEEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEE
T ss_pred             eeCCEEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEE
Confidence            9999999999999999999999864    247999999999999999999999   999999999999999999999999


Q ss_pred             ecCCCCccCCCCCceeeccccccCCcccccccc-------cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCch
Q 045067          208 FNFSLSASIPEGETYIDDGVKGTSGIVAPEYAR-------TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESF  280 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~  280 (347)
                      +|||+++.............+||+.|+|||++.       +..++.++|||||||++|||+ +|++||.....       
T Consensus       204 ~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyell-tG~~Pf~~~~~-------  275 (412)
T 2vd5_A          204 ADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMF-YGQTPFYADST-------  275 (412)
T ss_dssp             CCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHH-HSSCTTCCSSH-------
T ss_pred             eechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHH-hCCCCCCCCCH-------
Confidence            999999887655444344568999999999887       357899999999999999999 99999964321       


Q ss_pred             HHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCC---CCHHHHHH
Q 045067          281 EMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDR---PTMIDVAK  338 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~R---Ps~~ell~  338 (347)
                       .............  ...+.     .....+.++.+++.+||. +|.+|   |+++|+++
T Consensus       276 -~~~~~~i~~~~~~--~~~p~-----~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          276 -AETYGKIVHYKEH--LSLPL-----VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             -HHHHHHHHTHHHH--CCCC---------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             -HHHHHHHHhcccC--cCCCc-----cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence             1222222211000  00010     011234578899999999 99998   58888864


No 108
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00  E-value=2.8e-45  Score=332.67  Aligned_cols=264  Identities=18%  Similarity=0.294  Sum_probs=208.0

Q ss_pred             HhccCCCCCeecccCceEEEEEEeC--------CceEEEEEEccC-CCchhHHHHHHHHHHHHhc-CCCceeeeeeeeee
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLP--------DRTISVVKFIDG-SVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLE  129 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~  129 (347)
                      ..++|...+.||+|+||.||+|.+.        ++..+++|.... ......+.+.+|+.+++++ +||||+++++++.+
T Consensus        33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~  112 (334)
T 2pvf_A           33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ  112 (334)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence            3578999999999999999999872        234455555543 3444557799999999999 89999999999999


Q ss_pred             CCccEEEEEeCCCCCHHHHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeE
Q 045067          130 VEIPVLVFESAEYGNLHDLLKRSYQS-----------HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYIL  198 (347)
Q Consensus       130 ~~~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nil  198 (347)
                      .+..++||||+++|+|.+++......           ....+++..+..++.|++.||.|||   +.+|+||||||+||+
T Consensus       113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIl  189 (334)
T 2pvf_A          113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVL  189 (334)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEE
T ss_pred             CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEE
Confidence            99999999999999999999864210           1234899999999999999999999   999999999999999


Q ss_pred             ECCCCceEEecCCCCccCCCCCcee-eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCC
Q 045067          199 VSERYVPKLFNFSLSASIPEGETYI-DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGD  277 (347)
Q Consensus       199 l~~~~~~kl~Dfg~a~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~  277 (347)
                      ++.++.+||+|||++.......... .....+|+.|+|||++.+..++.++||||||+++|+|++.|..||.....    
T Consensus       190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----  265 (334)
T 2pvf_A          190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----  265 (334)
T ss_dssp             ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH----
T ss_pred             EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH----
Confidence            9999999999999998765443222 23355788999999998889999999999999999999449999964321    


Q ss_pred             CchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          278 ESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                          ..... ....+....     .     ....+..+.+++.+||+.+|.+|||+.|+++.|+++.+
T Consensus       266 ----~~~~~-~~~~~~~~~-----~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~  318 (334)
T 2pvf_A          266 ----EELFK-LLKEGHRMD-----K-----PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT  318 (334)
T ss_dssp             ----HHHHH-HHHHTCCCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             ----HHHHH-HHhcCCCCC-----C-----CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence                12222 222221110     0     11224568899999999999999999999999999865


No 109
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00  E-value=3e-45  Score=330.12  Aligned_cols=264  Identities=17%  Similarity=0.185  Sum_probs=186.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCce-EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRT-ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~-~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .++|...+.||+|+||.||+|.. .++. +++|++.........+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   83 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE   83 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence            46788999999999999999998 4444 555544433333344678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          139 SAEYGNLHDLLKRSYQ-SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      |++ |+|.+++..... .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~  159 (317)
T 2pmi_A           84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG  159 (317)
T ss_dssp             CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred             ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence            998 599999876421 12245899999999999999999999   9999999999999999999999999999998764


Q ss_pred             CCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhc-cCcc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-RGFN  295 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  295 (347)
                      .... ......||+.|+|||++.+ ..++.++|||||||++|+|+ +|++||.....        .......... +...
T Consensus       160 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~--------~~~~~~i~~~~~~~~  229 (317)
T 2pmi_A          160 IPVN-TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMI-TGKPLFPGTND--------EEQLKLIFDIMGTPN  229 (317)
T ss_dssp             SCCC-CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHHHHHCSCC
T ss_pred             CCcc-cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCh--------HHHHHHHHHHhCCCC
Confidence            3322 1234578999999998876 46899999999999999999 89999964321        1111111110 0000


Q ss_pred             c-c---------cCCccC----C-------chhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 G-I---------VDPRII----G-------DELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~-~---------~~~~~~----~-------~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . .         ..+.+.    .       .......+.++.+++.+||+.||++|||+.|+++
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          230 ESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             TTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            0 0         000000    0       0000122457889999999999999999999975


No 110
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00  E-value=9.5e-46  Score=334.77  Aligned_cols=258  Identities=19%  Similarity=0.296  Sum_probs=198.3

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-Cce----EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRT----ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~----~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      .++|...+.||+|+||+||+|.+ . +..    +++|++.........+.+.+|+.++++++||||+++++++.++. .+
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~   92 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ   92 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence            35688899999999999999998 3 333    34444444444445578999999999999999999999998754 78


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +++||+.+|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus        93 ~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~  165 (327)
T 3lzb_A           93 LITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAK  165 (327)
T ss_dssp             EEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--
T ss_pred             EEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCccee
Confidence            999999999999999763    357999999999999999999999   9999999999999999999999999999998


Q ss_pred             cCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          215 SIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       215 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ....... .......+|+.|+|||.+.+..++.++|||||||++|+|++.|..||.....     ..    .........
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~-----~~----~~~~~~~~~  236 (327)
T 3lzb_A          166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA-----SE----ISSILEKGE  236 (327)
T ss_dssp             --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG-----GG----HHHHHHTTC
T ss_pred             EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH-----HH----HHHHHHcCC
Confidence            7644322 1223455788999999999999999999999999999999339999975322     11    111122111


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ...       .   ....+..+.+++.+||+.||.+|||+.|+++.|+++.+
T Consensus       237 ~~~-------~---~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~  278 (327)
T 3lzb_A          237 RLP-------Q---PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR  278 (327)
T ss_dssp             CCC-------C---CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred             CCC-------C---CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence            100       0   11224468899999999999999999999999999864


No 111
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00  E-value=2.4e-45  Score=329.56  Aligned_cols=261  Identities=16%  Similarity=0.140  Sum_probs=198.1

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccE
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      ...++|...+.||+|+||.||+|.. .++..+++|+.....   ....+.+.+|+.++.+++||||+++++++.+++..+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~  110 (309)
T 2h34_A           31 TQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLY  110 (309)
T ss_dssp             ---CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             cEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEE
Confidence            3457899999999999999999998 556666666655432   223467899999999999999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++.
T Consensus       111 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~  182 (309)
T 2h34_A          111 VDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIAS  182 (309)
T ss_dssp             EEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC--
T ss_pred             EEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCc
Confidence            999999999999999875     67999999999999999999999   9999999999999999999999999999987


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ..............||+.|+|||.+.+..++.++||||||+++|+|+ +|+.||.....         ............
T Consensus       183 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~---------~~~~~~~~~~~~  252 (309)
T 2h34_A          183 ATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECL-TGSPPYQGDQL---------SVMGAHINQAIP  252 (309)
T ss_dssp             --------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHH-HSSCSSCSCHH---------HHHHHHHHSCCC
T ss_pred             cccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHH-HCCCCCCCchH---------HHHHHHhccCCC
Confidence            76544333334567999999999999999999999999999999999 89999964321         122222221110


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-CHHHHHHHHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-TMIDVAKQIKKMYK  345 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-s~~ell~~L~~i~~  345 (347)
                      .    +    .......+..+.+++.+||+.||++|| |+.++++.|+++..
T Consensus       253 ~----~----~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~  296 (309)
T 2h34_A          253 R----P----STVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALA  296 (309)
T ss_dssp             C----G----GGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC
T ss_pred             C----c----cccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHH
Confidence            0    0    011112344678999999999999999 99999999987643


No 112
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00  E-value=8.7e-46  Score=333.03  Aligned_cols=274  Identities=19%  Similarity=0.318  Sum_probs=214.3

Q ss_pred             cCHHHHHHHhccCCCCCeecccCceEEEEEEe------CCceEEEEEEccC-CCchhHHHHHHHHHHHHhc-CCCceeee
Q 045067           52 FSAKELERATNNYHYRNIITESSIFRLCQGVL------PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQM-SHNNVLRL  123 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l  123 (347)
                      +...++....++|...+.||+|+||+||+|.+      .++..+++|.... ......+.+.+|+.++.++ +||||+++
T Consensus        17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~   96 (316)
T 2xir_A           17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL   96 (316)
T ss_dssp             CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence            55666777788999999999999999999984      2345555555544 3344456789999999999 79999999


Q ss_pred             eeeeeeCC-ccEEEEEeCCCCCHHHHHhhhccC-----------CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEecc
Q 045067          124 IGCCLEVE-IPVLVFESAEYGNLHDLLKRSYQS-----------HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRD  191 (347)
Q Consensus       124 ~~~~~~~~-~~~lv~e~~~~g~L~~~l~~~~~~-----------~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~d  191 (347)
                      ++++...+ ..++||||+++|+|.+++......           ....+++..+..++.|++.||.|||   +.+|+|||
T Consensus        97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~d  173 (316)
T 2xir_A           97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRD  173 (316)
T ss_dssp             EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSC
T ss_pred             EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCccccc
Confidence            99988754 589999999999999999864110           0122889999999999999999999   99999999


Q ss_pred             CCCCCeEECCCCceEEecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCcccc
Q 045067          192 LKSSYILVSERYVPKLFNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNM  270 (347)
Q Consensus       192 lkp~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~  270 (347)
                      |||+||+++.++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|+|++.|..||..
T Consensus       174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~  253 (316)
T 2xir_A          174 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG  253 (316)
T ss_dssp             CSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred             CccceEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcc
Confidence            999999999999999999999987654433 2234466889999999999999999999999999999999449999964


Q ss_pred             CccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          271 GLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...       ..... .....+....     .     ....++.+.+++.+||+.||.+|||+.|+++.|+++.++
T Consensus       254 ~~~-------~~~~~-~~~~~~~~~~-----~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  311 (316)
T 2xir_A          254 VKI-------DEEFC-RRLKEGTRMR-----A-----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  311 (316)
T ss_dssp             CCC-------SHHHH-HHHHHTCCCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             cch-------hHHHH-HHhccCccCC-----C-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            321       11111 2222211110     0     011244688999999999999999999999999998764


No 113
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00  E-value=6.8e-45  Score=330.87  Aligned_cols=276  Identities=18%  Similarity=0.228  Sum_probs=213.0

Q ss_pred             cCHHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHh--cCCCceeeeeeeeee
Q 045067           52 FSAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQ--MSHNNVLRLIGCCLE  129 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~  129 (347)
                      .+..--....++|...+.||+|+||.||+|.+.+..+|+|.+...    ..+.+.+|+.++..  ++||||+++++++..
T Consensus        32 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~  107 (342)
T 1b6c_B           32 LPLLVQRTIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNK  107 (342)
T ss_dssp             SCHHHHHHHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEEC
T ss_pred             CceeecccccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecc
Confidence            455555667789999999999999999999997666666655322    23667889999987  789999999999988


Q ss_pred             CC----ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEeccCCCCCeEEC
Q 045067          130 VE----IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF-----SRPIVFRDLKSSYILVS  200 (347)
Q Consensus       130 ~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivH~dlkp~Nill~  200 (347)
                      ..    ..++||||+++|+|.+++.+      ..+++..+..++.|++.||.|||+..     +.+|+||||||+|||++
T Consensus       108 ~~~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~  181 (342)
T 1b6c_B          108 DNGTWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK  181 (342)
T ss_dssp             CCSSCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC
T ss_pred             cCCccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC
Confidence            76    78999999999999999976      46999999999999999999999321     46899999999999999


Q ss_pred             CCCceEEecCCCCccCCCCCce---eeccccccCCcccccccccC------CCCCccchHHHHHHHHHHHhcC-------
Q 045067          201 ERYVPKLFNFSLSASIPEGETY---IDDGVKGTSGIVAPEYARTG------YLNEKCDVYSFGLLLLQLLSTG-------  264 (347)
Q Consensus       201 ~~~~~kl~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~~~g-------  264 (347)
                      .++.+||+|||++.........   ......||+.|+|||.+.+.      .++.++|||||||++|||+ +|       
T Consensus       182 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~-tg~~~~~~~  260 (342)
T 1b6c_B          182 KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA-RRCSIGGIH  260 (342)
T ss_dssp             TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHH-TTBCBTTBC
T ss_pred             CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHH-hccCcCCcc
Confidence            9999999999999776544322   12345799999999988765      2347899999999999999 77       


Q ss_pred             ---CCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHH
Q 045067          265 ---EDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIK  341 (347)
Q Consensus       265 ---~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~  341 (347)
                         ..||......   ......+ ........    ..+.+.........+..+.+++.+||+.||++|||+.++++.|+
T Consensus       261 ~~~~~p~~~~~~~---~~~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~  332 (342)
T 1b6c_B          261 EDYQLPYYDLVPS---DPSVEEM-RKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLS  332 (342)
T ss_dssp             CCCCCTTTTTSCS---SCCHHHH-HHHHTTSC----CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHH
T ss_pred             cccccCccccCcC---cccHHHH-HHHHHHHH----hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence               6676543221   1111122 22221111    12222221223356778999999999999999999999999999


Q ss_pred             HHHHh
Q 045067          342 KMYKS  346 (347)
Q Consensus       342 ~i~~~  346 (347)
                      ++.++
T Consensus       333 ~i~~~  337 (342)
T 1b6c_B          333 QLSQQ  337 (342)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            99875


No 114
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00  E-value=5.2e-45  Score=327.33  Aligned_cols=265  Identities=20%  Similarity=0.259  Sum_probs=197.3

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccC--CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDG--SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ..++|...+.||+|+||.||+|.. . +..+++|++...  ......+.+.+|+.++++++||||+++++++.+++..++
T Consensus        30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            346789999999999999999998 4 445555554432  223445678999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++++|.+++.... .....+++..+..++.+++.||.|||   +.+++||||||+||+++.++.+||+|||++..
T Consensus       110 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~  185 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFK-KQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRF  185 (310)
T ss_dssp             EEECCCSCBHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC-----
T ss_pred             EEecCCCCCHHHHHHHhc-ccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceee
Confidence            999999999999997531 12356899999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ...... ......|++.|+|||.+.+..++.++||||||+++|+|+ +|..||.....      ....... ........
T Consensus       186 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~-~g~~p~~~~~~------~~~~~~~-~~~~~~~~  256 (310)
T 2wqm_A          186 FSSKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA-ALQSPFYGDKM------NLYSLCK-KIEQCDYP  256 (310)
T ss_dssp             --------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTC---C------CHHHHHH-HHHTTCSC
T ss_pred             ecCCCc-cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHH-hCCCCCcccch------hHHHHHH-HhhcccCC
Confidence            543322 123456899999999999999999999999999999999 89999853211      1112222 22222211


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ....         ...+.++.+++.+||+.||++|||+.++++.|+++...
T Consensus       257 ~~~~---------~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~  298 (310)
T 2wqm_A          257 PLPS---------DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC  298 (310)
T ss_dssp             CCCT---------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCcc---------cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence            1110         12245688999999999999999999999999998753


No 115
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00  E-value=1.2e-45  Score=336.85  Aligned_cols=249  Identities=17%  Similarity=0.236  Sum_probs=201.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  134 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|++....   ....+.+.+|..++..+ +||||+++++++.+.+..+
T Consensus        18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~   97 (353)
T 2i0e_A           18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY   97 (353)
T ss_dssp             -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred             chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence            356799999999999999999999 556666666654321   22346688999999988 7999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||++||+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus        98 lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~  169 (353)
T 2i0e_A           98 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK  169 (353)
T ss_dssp             EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCB
T ss_pred             EEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCccc
Confidence            999999999999999875     67999999999999999999999   9999999999999999999999999999997


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ....... .....+||+.|+|||++.+..++.++|||||||++|||+ +|++||....        ............ .
T Consensus       170 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~G~~Pf~~~~--------~~~~~~~i~~~~-~  238 (353)
T 2i0e_A          170 ENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGED--------EDELFQSIMEHN-V  238 (353)
T ss_dssp             CCCCTTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHH-HSSCSSCCSS--------HHHHHHHHHHCC-C
T ss_pred             ccccCCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHH-cCCCCCCCCC--------HHHHHHHHHhCC-C
Confidence            6433222 234568999999999999999999999999999999999 8999996432        122223332221 1


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCC-----HHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT-----MIDVAK  338 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs-----~~ell~  338 (347)
                            ..     +...+.++.+++.+||+.||.+||+     +.++++
T Consensus       239 ------~~-----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~  276 (353)
T 2i0e_A          239 ------AY-----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  276 (353)
T ss_dssp             ------CC-----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred             ------CC-----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence                  01     1123456889999999999999996     466653


No 116
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00  E-value=1.6e-45  Score=327.76  Aligned_cols=261  Identities=21%  Similarity=0.298  Sum_probs=205.0

Q ss_pred             HHHhccCCCCC-eecccCceEEEEEEe---CCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC
Q 045067           58 ERATNNYHYRN-IITESSIFRLCQGVL---PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE  131 (347)
Q Consensus        58 ~~~~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  131 (347)
                      ....++|...+ .||+|+||+||+|.+   .++..+++|......  ....+.+.+|+.+++.++||||+++++++ ..+
T Consensus        12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~   90 (291)
T 1xbb_A           12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAE   90 (291)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESS
T ss_pred             eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCC
Confidence            33456677777 999999999999965   334555555554332  23357799999999999999999999998 567


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                      ..++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||
T Consensus        91 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg  162 (291)
T 1xbb_A           91 SWMLVMEMAELGPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFG  162 (291)
T ss_dssp             SEEEEEECCTTEEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred             CcEEEEEeCCCCCHHHHHHhC-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCC
Confidence            789999999999999999874     56999999999999999999999   9999999999999999999999999999


Q ss_pred             CCccCCCCCceee--ccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          212 LSASIPEGETYID--DGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       212 ~a~~~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      ++...........  ....+++.|+|||.+.+..++.++||||||+++|+|++.|..||.....        .. .....
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~-~~~~~  233 (291)
T 1xbb_A          163 LSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SE-VTAML  233 (291)
T ss_dssp             TCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HH-HHHHH
T ss_pred             cceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--------HH-HHHHH
Confidence            9987755443222  2345678999999999888999999999999999999339999964321        11 22222


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..+....     .     ....+..+.+++.+||+.||++|||+.++++.|+++..+
T Consensus       234 ~~~~~~~-----~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  280 (291)
T 1xbb_A          234 EKGERMG-----C-----PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  280 (291)
T ss_dssp             HTTCCCC-----C-----CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             HcCCCCC-----C-----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            2221110     1     112345688999999999999999999999999998754


No 117
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00  E-value=1.4e-45  Score=336.45  Aligned_cols=252  Identities=19%  Similarity=0.216  Sum_probs=187.1

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ...+.|...+.||+|+||.||+|.. .++..+++|++....  ..+.+.+|+.++++++||||+++++++.+++..++||
T Consensus        50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~  127 (349)
T 2w4o_A           50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL  127 (349)
T ss_dssp             CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence            4567799999999999999999999 455555555554432  2366889999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC---CCceEEecCCCCc
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE---RYVPKLFNFSLSA  214 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~---~~~~kl~Dfg~a~  214 (347)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+|||+++
T Consensus       128 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          128 ELVTGGELFDRIVEK-----GYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             CCCCSCBHHHHHTTC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             EeCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            999999999999764     56999999999999999999999   999999999999999975   8899999999997


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ......  ......||+.|+|||++.+..++.++|||||||++|||+ +|..||.....       .......... ...
T Consensus       200 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~-------~~~~~~~i~~-~~~  268 (349)
T 2w4o_A          200 IVEHQV--LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL-CGFEPFYDERG-------DQFMFRRILN-CEY  268 (349)
T ss_dssp             ---------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCCTTC-------HHHHHHHHHT-TCC
T ss_pred             ccCccc--ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHH-hCCCCCCCCcc-------cHHHHHHHHh-CCC
Confidence            654322  123467999999999999999999999999999999999 89999864321       1111222222 111


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . ...      ......+..+.+++.+||+.||++|||+.|+++
T Consensus       269 ~-~~~------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          269 Y-FIS------PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             C-CCT------TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             c-cCC------chhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            1 000      111223456889999999999999999999986


No 118
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00  E-value=2.8e-47  Score=340.64  Aligned_cols=267  Identities=19%  Similarity=0.237  Sum_probs=189.7

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHh--cCCCceeeeeeeeeeCC----ccE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQ--MSHNNVLRLIGCCLEVE----IPV  134 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~~~  134 (347)
                      .++|...+.||+|+||.||+|.+.+..+|+|.+...    ....+.+|..++..  ++||||+++++++....    ..+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   77 (303)
T 3gxj_A            2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW   77 (303)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred             cceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence            467999999999999999999988777776665332    22567788888887  79999999999998876    789


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----CCCeEeccCCCCCeEECCCCceEEec
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF-----SRPIVFRDLKSSYILVSERYVPKLFN  209 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----~~~ivH~dlkp~Nill~~~~~~kl~D  209 (347)
                      +||||+++|+|.+++..      ..+++..+..++.|++.||.|||...     +.+|+||||||+|||++.++.+||+|
T Consensus        78 lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D  151 (303)
T 3gxj_A           78 LVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD  151 (303)
T ss_dssp             EEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred             EEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence            99999999999999976      46888899999999999999999422     57899999999999999999999999


Q ss_pred             CCCCccCCCCCcee---eccccccCCcccccccccC------CCCCccchHHHHHHHHHHHhcC----------CCcccc
Q 045067          210 FSLSASIPEGETYI---DDGVKGTSGIVAPEYARTG------YLNEKCDVYSFGLLLLQLLSTG----------EDLFNM  270 (347)
Q Consensus       210 fg~a~~~~~~~~~~---~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~el~~~g----------~~p~~~  270 (347)
                      ||++..........   .....||+.|+|||++.+.      .++.++|||||||++|||+ +|          ..||..
T Consensus       152 Fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~-~g~~~~~~~~~~~~p~~~  230 (303)
T 3gxj_A          152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIA-RRCSIGGIHEDYQLPYYD  230 (303)
T ss_dssp             CCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTG-GGBCBTTBC-CCCCTTTT
T ss_pred             cCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHH-hcCCCccccceeeccccc
Confidence            99997655433321   2334799999999988776      4447899999999999999 77          555543


Q ss_pred             CccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          271 GLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...........    .......    ...+...........+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       231 ~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~  298 (303)
T 3gxj_A          231 LVPSDPSVEEM----RKVVCEQ----KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             TCC-CCCCC-C----HHHHTTS----CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred             cCCCCccHHHH----HHHHHHh----hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence            22211111111    1111111    11122221122235567899999999999999999999999999988653


No 119
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00  E-value=1.5e-45  Score=337.72  Aligned_cols=211  Identities=20%  Similarity=0.240  Sum_probs=181.5

Q ss_pred             CCccccCHHHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-----CCce
Q 045067           47 NPIRSFSAKELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-----HNNV  120 (347)
Q Consensus        47 ~~~~~~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-----h~ni  120 (347)
                      ..+..+++.+.....++|...+.||+|+||+||+|.. .++..+++|++.... ...+.+..|+.+++.++     ||||
T Consensus        20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~i   98 (360)
T 3llt_A           20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNI   98 (360)
T ss_dssp             CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGB
T ss_pred             ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCe
Confidence            3455577777777889999999999999999999999 556666666655432 33466788999999996     9999


Q ss_pred             eeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC
Q 045067          121 LRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS  200 (347)
Q Consensus       121 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~  200 (347)
                      +++++++...+..++||||+ +++|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++
T Consensus        99 v~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~  171 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRN---NYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLD  171 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEES
T ss_pred             ecccceeeECCeeEEEEcCC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEc
Confidence            99999999999999999999 78999999874   2245999999999999999999999   99999999999999997


Q ss_pred             C-------------------------CCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHH
Q 045067          201 E-------------------------RYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGL  255 (347)
Q Consensus       201 ~-------------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~  255 (347)
                      .                         ++.+||+|||++.......    ....||+.|+|||++.+..++.++|||||||
T Consensus       172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  247 (360)
T 3llt_A          172 DPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGC  247 (360)
T ss_dssp             CTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHH
T ss_pred             cccccccccchhcccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHH
Confidence            5                         7899999999997654322    3457899999999999999999999999999


Q ss_pred             HHHHHHhcCCCcccc
Q 045067          256 LLLQLLSTGEDLFNM  270 (347)
Q Consensus       256 ~l~el~~~g~~p~~~  270 (347)
                      ++|+|+ +|+.||..
T Consensus       248 il~ell-~g~~pf~~  261 (360)
T 3llt_A          248 VLAELY-TGSLLFRT  261 (360)
T ss_dssp             HHHHHH-HSSCSCCC
T ss_pred             HHHHHH-HCCCCCCC
Confidence            999999 99999964


No 120
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00  E-value=2e-45  Score=340.45  Aligned_cols=268  Identities=15%  Similarity=0.155  Sum_probs=198.6

Q ss_pred             HhccCCCCCeeccc--CceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccE
Q 045067           60 ATNNYHYRNIITES--SIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        60 ~~~~~~~~~~lg~G--~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      ..++|+..+.||+|  +||+||+|.. .++..+++|.+...  .....+.+.+|+.++++++||||+++++++.+++..+
T Consensus        23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  102 (389)
T 3gni_B           23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW  102 (389)
T ss_dssp             CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred             CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence            35679999999999  9999999999 44544444444322  2334567889999999999999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||+++|+|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||.+.
T Consensus       103 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~  176 (389)
T 3gni_B          103 VVTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNL  176 (389)
T ss_dssp             EEEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred             EEEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccce
Confidence            999999999999999764   2356999999999999999999999   9999999999999999999999999999886


Q ss_pred             cCCCCCc------eeeccccccCCccccccccc--CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          215 SIPEGET------YIDDGVKGTSGIVAPEYART--GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       215 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      .......      .......||+.|+|||++.+  ..++.++|||||||++|+|+ +|++||......    ........
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~----~~~~~~~~  251 (389)
T 3gni_B          177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELA-NGHVPFKDMPAT----QMLLEKLN  251 (389)
T ss_dssp             ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHH-HSSCTTTTCCST----THHHHC--
T ss_pred             eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHH-HCCCCCCCCCHH----HHHHHHhc
Confidence            5432211      11123478999999999887  57899999999999999999 899999753221    00000000


Q ss_pred             HHHh----------------------ccCccccc--------CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 045067          287 KYIE----------------------NRGFNGIV--------DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDV  336 (347)
Q Consensus       287 ~~~~----------------------~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~el  336 (347)
                      ....                      ........        .............++.+.+|+.+||+.||++|||+.|+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el  331 (389)
T 3gni_B          252 GTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL  331 (389)
T ss_dssp             ------------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred             CCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            0000                      00000000        00000001112234578999999999999999999999


Q ss_pred             HH
Q 045067          337 AK  338 (347)
Q Consensus       337 l~  338 (347)
                      ++
T Consensus       332 l~  333 (389)
T 3gni_B          332 LN  333 (389)
T ss_dssp             TT
T ss_pred             hc
Confidence            85


No 121
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00  E-value=3.2e-45  Score=331.16  Aligned_cols=268  Identities=18%  Similarity=0.270  Sum_probs=208.4

Q ss_pred             hccCCCCCeecccCceEEEEEEe-----CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC--cc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-----PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE--IP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~  133 (347)
                      .++|...+.||+|+||.||+|.+     .++..+++|..........+.+.+|+.++++++||||+++++++...+  ..
T Consensus        40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  119 (326)
T 2w1i_A           40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL  119 (326)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred             HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence            45688889999999999999984     345555666555555555678999999999999999999999987654  78


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ++||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++
T Consensus       120 ~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~  192 (326)
T 2w1i_A          120 KLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLT  192 (326)
T ss_dssp             EEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             EEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcch
Confidence            9999999999999999863    256999999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCcee--eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCcc-------CCCCCchHHHH
Q 045067          214 ASIPEGETYI--DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLR-------LNGDESFEMDF  284 (347)
Q Consensus       214 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~-------~~~~~~~~~~~  284 (347)
                      ..........  .....++..|+|||.+.+..++.++||||||+++|+|+ +|..|+.....       ...........
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~-tg~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (326)
T 2w1i_A          193 KVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF-TYIEKSKSPPAEFMRMIGNDKQGQMIVFH  271 (326)
T ss_dssp             EECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH-HTTCGGGSHHHHHHHHHCTTCCTHHHHHH
T ss_pred             hhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHH-hcCCCCCCCHHHHHHhhccccchhhhHHH
Confidence            8776543322  22345778899999999888999999999999999999 88888763210       00000111111


Q ss_pred             HHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ...........       .   .....+.++.+++.+||+.||++|||+.|+++.|+++.++
T Consensus       272 ~~~~~~~~~~~-------~---~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~  323 (326)
T 2w1i_A          272 LIELLKNNGRL-------P---RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ  323 (326)
T ss_dssp             HHHHHHTTCCC-------C---CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhhcCCCC-------C---CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence            12222221110       0   0112345688999999999999999999999999999875


No 122
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00  E-value=7.5e-45  Score=323.93  Aligned_cols=264  Identities=17%  Similarity=0.164  Sum_probs=204.0

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeee-eeCCccEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCC-LEVEIPVLVF  137 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~-~~~~~~~lv~  137 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|+......  .+.+.+|+.+++.++|++++..+.++ ..++..++||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence            356799999999999999999998 5555555555443322  25688999999999988766655554 5667889999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE---CCCCceEEecCCCCc
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV---SERYVPKLFNFSLSA  214 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~a~  214 (347)
                      ||+ +++|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||++.
T Consensus        85 e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~  156 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAK  156 (296)
T ss_dssp             ECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCE
T ss_pred             Eec-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcc
Confidence            999 78999999752    257999999999999999999999   9999999999999999   488999999999998


Q ss_pred             cCCCCCce------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          215 SIPEGETY------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       215 ~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      ........      ......||+.|+|||.+.+..++.++|||||||++|+|+ +|+.||......... ..........
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~~-~~~~~~~~~~  234 (296)
T 3uzp_A          157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFN-LGSLPWQGLKAATKR-QKYERISEKK  234 (296)
T ss_dssp             ECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCCSSSS-SHHHHHHHHH
T ss_pred             cccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHH-hCCCCCCCcCchhhh-hhhhhhcccc
Confidence            76544321      123467999999999999999999999999999999999 899999764331111 1111111111


Q ss_pred             HhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ... ..          +......++.+.+++.+||+.||++|||+.++++.|+++..+
T Consensus       235 ~~~-~~----------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  281 (296)
T 3uzp_A          235 MST-PI----------EVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  281 (296)
T ss_dssp             HHS-CH----------HHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cCC-ch----------HHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHh
Confidence            111 00          001112245688999999999999999999999999998764


No 123
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00  E-value=5e-45  Score=329.20  Aligned_cols=252  Identities=19%  Similarity=0.247  Sum_probs=201.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCce-EEEEEEccCCCc-----hhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRT-ISVVKFIDGSVF-----DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~-~~v~k~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      ..+.|...+.||+|+||.||+|.. .++. +++|.+......     ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus        10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            356788999999999999999998 4444 555444433221     134679999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC----ceEEe
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY----VPKLF  208 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~----~~kl~  208 (347)
                      .++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++    .+||+
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~  161 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLI  161 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHTC-----SCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEEC
T ss_pred             EEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEc
Confidence            99999999999999999764     67899999999999999999999   99999999999999999887    79999


Q ss_pred             cCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          209 NFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       209 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      |||++........  .....||+.|+|||.+.+..++.++|||||||++|+|+ +|..||.....        .......
T Consensus       162 Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~--------~~~~~~i  230 (321)
T 2a2a_A          162 DFGLAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGDTK--------QETLANI  230 (321)
T ss_dssp             CCTTCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSCCSSCCSSH--------HHHHHHH
T ss_pred             cCccceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHH-HCCCCCCCCCH--------HHHHHHH
Confidence            9999987654332  23456999999999999999999999999999999999 89999964321        1122221


Q ss_pred             HhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .. ....  .     ........+..+.+++.+||+.||++|||+.|+++
T Consensus       231 ~~-~~~~--~-----~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          231 TS-VSYD--F-----DEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HT-TCCC--C-----CHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             Hh-cccc--c-----ChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            11 1100  0     01111223456889999999999999999999986


No 124
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00  E-value=3.6e-45  Score=330.97  Aligned_cols=248  Identities=19%  Similarity=0.202  Sum_probs=191.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe----CCceEEEEEEccCCC----chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL----PDRTISVVKFIDGSV----FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~v~k~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      .++|...+.||+|+||.||+|..    .++..+++|++....    ......+.+|+.++++++||||+++++++.+++.
T Consensus        16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   95 (327)
T 3a62_A           16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK   95 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred             HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence            46799999999999999999987    355566666554432    2233567899999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~  167 (327)
T 3a62_A           96 LYLILEYLSGGELFMQLERE-----GIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGL  167 (327)
T ss_dssp             EEEEEECCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSC
T ss_pred             EEEEEeCCCCCcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCc
Confidence            99999999999999999875     67899999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      ++....... ......||+.|+|||++.+..++.++|||||||++|+|+ +|+.||.....        ...........
T Consensus       168 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~--------~~~~~~i~~~~  237 (327)
T 3a62_A          168 CKESIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML-TGAPPFTGENR--------KKTIDKILKCK  237 (327)
T ss_dssp             C-----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHHHTC
T ss_pred             ccccccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHH-HCCCCCCCCCH--------HHHHHHHHhCC
Confidence            876433222 233467999999999999889999999999999999999 89999964321        22222222211


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-----TMIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-----s~~ell~  338 (347)
                       .      .+     +...+..+.+++.+||+.||++||     ++.|+++
T Consensus       238 -~------~~-----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          238 -L------NL-----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             -C------CC-----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             -C------CC-----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence             0      00     012245678999999999999999     6777765


No 125
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00  E-value=4.2e-45  Score=324.21  Aligned_cols=253  Identities=19%  Similarity=0.234  Sum_probs=194.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .+.|...+.||+|+||.||+|.. . +..+++|++.........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e  100 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME  100 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence            45788899999999999999998 4 445555555444333445789999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE---CCCCceEEecCCCCcc
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV---SERYVPKLFNFSLSAS  215 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~a~~  215 (347)
                      |+++|+|.+++.... .....+++..+..++.|++.||+|||   +.+|+||||||+||++   +.++.+||+|||++..
T Consensus       101 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~  176 (285)
T 3is5_A          101 TCEGGELLERIVSAQ-ARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAEL  176 (285)
T ss_dssp             CCSCCBHHHHHHHHH-HHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred             eCCCCcHHHHHHhhh-hcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence            999999999986531 12256999999999999999999999   9999999999999999   4568899999999976


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ......  .....||+.|+|||.+. ..++.++||||+|+++|+|+ +|..||.....        ..............
T Consensus       177 ~~~~~~--~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll-~g~~pf~~~~~--------~~~~~~~~~~~~~~  244 (285)
T 3is5_A          177 FKSDEH--STNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLL-TGCLPFTGTSL--------EEVQQKATYKEPNY  244 (285)
T ss_dssp             ------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHCCCCC
T ss_pred             cCCccc--CcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHH-hCCCCCCCCCH--------HHHHhhhccCCccc
Confidence            544322  23467899999999876 56799999999999999999 89999964321        11111111111100


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . ..        ....++.+.+++.+||+.||++|||+.|+++
T Consensus       245 ~-~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          245 A-VE--------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             C-C----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             c-cc--------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0 00        0012346789999999999999999999985


No 126
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00  E-value=4.2e-46  Score=336.15  Aligned_cols=271  Identities=21%  Similarity=0.308  Sum_probs=212.7

Q ss_pred             cCHHHHHHHhccCCCCCeecccCceEEEEEEeC------CceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeee
Q 045067           52 FSAKELERATNNYHYRNIITESSIFRLCQGVLP------DRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLI  124 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~  124 (347)
                      +..++++...++|...+.||+|+||.||+|.+.      ++..+++|... .........+.+|+.++++++||||++++
T Consensus        15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~   94 (322)
T 1p4o_A           15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL   94 (322)
T ss_dssp             CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred             cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence            455566777889999999999999999999873      23444555444 33344456789999999999999999999


Q ss_pred             eeeeeCCccEEEEEeCCCCCHHHHHhhhcc-----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE
Q 045067          125 GCCLEVEIPVLVFESAEYGNLHDLLKRSYQ-----SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV  199 (347)
Q Consensus       125 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill  199 (347)
                      +++.+++..++||||+++|+|.+++.....     .....+++..+..++.|++.||.|||   +.+|+||||||+||++
T Consensus        95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli  171 (322)
T 1p4o_A           95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMV  171 (322)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEE
T ss_pred             EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEE
Confidence            999999999999999999999999975310     11145789999999999999999999   9999999999999999


Q ss_pred             CCCCceEEecCCCCccCCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCC
Q 045067          200 SERYVPKLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDE  278 (347)
Q Consensus       200 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~  278 (347)
                      +.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|+|++.|..||.....     
T Consensus       172 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----  246 (322)
T 1p4o_A          172 AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----  246 (322)
T ss_dssp             CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----
T ss_pred             cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----
Confidence            99999999999999765433221 123345788999999999999999999999999999999448999864321     


Q ss_pred             chHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHH
Q 045067          279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMY  344 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~  344 (347)
                         ...... ...+.....          ....+..+.+++.+||+.||.+|||+.|+++.|+++.
T Consensus       247 ---~~~~~~-~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~  298 (322)
T 1p4o_A          247 ---EQVLRF-VMEGGLLDK----------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  298 (322)
T ss_dssp             ---HHHHHH-HHTTCCCCC----------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             ---HHHHHH-HHcCCcCCC----------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence               122222 222211110          1123456889999999999999999999999998764


No 127
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00  E-value=2.6e-46  Score=359.56  Aligned_cols=266  Identities=23%  Similarity=0.298  Sum_probs=210.1

Q ss_pred             CHHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           53 SAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        53 ~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      ..+.++...++|...+.||+|+||.||+|.+.++..+++|.+..... ..+.+.+|+.+|++++||||+++++++.+ +.
T Consensus       258 ~~~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~  335 (535)
T 2h8h_A          258 AKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EP  335 (535)
T ss_dssp             STTCSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             CccceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-cc
Confidence            34455566778888999999999999999995544444454444332 23779999999999999999999999876 67


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .+|||||+.+|+|.+++...   ....+++..+..++.|++.||+|||   +++|+||||||+|||++.++.+||+|||+
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~  409 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGL  409 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred             ceEeeehhcCCcHHHHHhhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEccccc
Confidence            89999999999999999753   1245899999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      ++..............+++.|+|||.+.+..++.++|||||||++|||++.|+.||.....        ....... ..+
T Consensus       410 a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--------~~~~~~i-~~~  480 (535)
T 2h8h_A          410 ARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--------REVLDQV-ERG  480 (535)
T ss_dssp             TTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--------HHHHHHH-HTT
T ss_pred             ceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--------HHHHHHH-HcC
Confidence            9876533222223345778999999999899999999999999999999449999964321        1222222 221


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ..       +..   ....+..+.+++.+||+.||++|||+.+|++.|+++..
T Consensus       481 ~~-------~~~---~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          481 YR-------MPC---PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             CC-------CCC---CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             CC-------CCC---CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            10       000   11234568899999999999999999999999998764


No 128
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00  E-value=2.1e-45  Score=332.43  Aligned_cols=266  Identities=21%  Similarity=0.228  Sum_probs=207.5

Q ss_pred             ccCCCCCeecccCceEEEEEEe-----CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeee--eCCccE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-----PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCL--EVEIPV  134 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~~~  134 (347)
                      ++|...+.||+|+||.||+|.+     .++..+++|.+........+.+.+|+.++++++||||+++++++.  +....+
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~  102 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR  102 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence            5688889999999999999984     355666666666555555677999999999999999999999887  445689


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +||||+++++|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+||+++.++.+||+|||++.
T Consensus       103 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~  175 (327)
T 3lxl_A          103 LVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAK  175 (327)
T ss_dssp             EEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred             EEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccce
Confidence            999999999999999863    246999999999999999999999   9999999999999999999999999999998


Q ss_pred             cCCCCCce--eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccC-------CCCCchHHHHH
Q 045067          215 SIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRL-------NGDESFEMDFV  285 (347)
Q Consensus       215 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~-------~~~~~~~~~~~  285 (347)
                      ........  ......+|+.|+|||.+.+..++.++||||||+++|+|+ +|..||......       ....... ...
T Consensus       176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll-~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~  253 (327)
T 3lxl_A          176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF-TYCDKSCSPSAEFLRMMGCERDVPAL-SRL  253 (327)
T ss_dssp             ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHH-TTTCGGGSHHHHHHHHCC----CCHH-HHH
T ss_pred             ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHH-hCCCCCccccchhhhhcccccccccH-HHH
Confidence            77544332  223456888899999999999999999999999999999 899888643210       0011111 111


Q ss_pred             HHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ......+...          ......++.+.+++.+||+.||++|||+.|+++.|+.+..+
T Consensus       254 ~~~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~  304 (327)
T 3lxl_A          254 LELLEEGQRL----------PAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSG  304 (327)
T ss_dssp             HHHHHTTCCC----------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC---
T ss_pred             HHHhhcccCC----------CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence            1111111100          01112345688999999999999999999999999988653


No 129
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=1.7e-45  Score=335.32  Aligned_cols=263  Identities=22%  Similarity=0.229  Sum_probs=200.1

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC-----CchhHHHHHHHHHHHHhcCCCceeeeeeeeee
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS-----VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE  129 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  129 (347)
                      ++....++|...+.||+|+||.||+|.. .++..+++|+....     .....+.+.+|+.++++++||||+++++++.+
T Consensus        20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~   99 (345)
T 3hko_A           20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED   99 (345)
T ss_dssp             CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred             hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence            4566778899999999999999999999 55555555554321     23445789999999999999999999999999


Q ss_pred             CCccEEEEEeCCCCCHHHHHhhhccC-----------------------------------CCCCCCHHHHHHHHHHHHH
Q 045067          130 VEIPVLVFESAEYGNLHDLLKRSYQS-----------------------------------HSEPLLLKHRLKIAMEIAN  174 (347)
Q Consensus       130 ~~~~~lv~e~~~~g~L~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~~i~~  174 (347)
                      .+..++||||+++|+|.+++......                                   ....+++..+..++.|++.
T Consensus       100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  179 (345)
T 3hko_A          100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS  179 (345)
T ss_dssp             SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence            99999999999999999998531100                                   0123467788899999999


Q ss_pred             HHHHhhcCCCCCeEeccCCCCCeEECCCC--ceEEecCCCCccCCCC---CceeeccccccCCccccccccc--CCCCCc
Q 045067          175 VFAYLHIGFSRPIVFRDLKSSYILVSERY--VPKLFNFSLSASIPEG---ETYIDDGVKGTSGIVAPEYART--GYLNEK  247 (347)
Q Consensus       175 ~l~~lH~~~~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~a~~~~~~---~~~~~~~~~gt~~y~aPE~~~~--~~~~~~  247 (347)
                      ||+|||   +.+|+||||||+||+++.++  .+||+|||++......   .........||+.|+|||.+.+  ..++.+
T Consensus       180 ~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~  256 (345)
T 3hko_A          180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK  256 (345)
T ss_dssp             HHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred             HHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence            999999   99999999999999998776  8999999999765322   1112345679999999998865  678999


Q ss_pred             cchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCC
Q 045067          248 CDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASA  327 (347)
Q Consensus       248 ~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P  327 (347)
                      +|||||||++|+|+ +|+.||.....        ..............        ........+..+.+++.+||+.||
T Consensus       257 ~DiwslG~il~el~-~g~~pf~~~~~--------~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p  319 (345)
T 3hko_A          257 CDAWSAGVLLHLLL-MGAVPFPGVND--------ADTISQVLNKKLCF--------ENPNYNVLSPLARDLLSNLLNRNV  319 (345)
T ss_dssp             HHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHCCCCT--------TSGGGGGSCHHHHHHHHHHSCSCT
T ss_pred             HHHHHHHHHHHHHH-HCCCCCCCCCh--------HHHHHHHHhccccc--------CCcccccCCHHHHHHHHHHcCCCh
Confidence            99999999999999 99999964321        22233333221110        011112235578899999999999


Q ss_pred             CCCCCHHHHHH
Q 045067          328 EDRPTMIDVAK  338 (347)
Q Consensus       328 ~~RPs~~ell~  338 (347)
                      .+|||+.|+++
T Consensus       320 ~~Rps~~~~l~  330 (345)
T 3hko_A          320 DERFDAMRALQ  330 (345)
T ss_dssp             TTSCCHHHHHH
T ss_pred             hHCCCHHHHhc
Confidence            99999999987


No 130
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00  E-value=3e-45  Score=331.18  Aligned_cols=250  Identities=20%  Similarity=0.229  Sum_probs=177.8

Q ss_pred             CCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeeCCccEEEEEeCCCCC
Q 045067           67 RNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNNVLRLIGCCLEVEIPVLVFESAEYGN  144 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~  144 (347)
                      .+.||+|+||+||+|.. .++..+++|.+...   ....+.+|+.++..+. ||||+++++++.++...++||||+++|+
T Consensus        16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            47899999999999999 45555555554432   2366789999999997 9999999999999999999999999999


Q ss_pred             HHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC---ceEEecCCCCccCCCCCc
Q 045067          145 LHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY---VPKLFNFSLSASIPEGET  221 (347)
Q Consensus       145 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~  221 (347)
                      |.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++   .+||+|||+++.......
T Consensus        93 L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~  164 (325)
T 3kn6_A           93 LFERIKKK-----KHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ  164 (325)
T ss_dssp             HHHHHHHC-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC---
T ss_pred             HHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC
Confidence            99999874     67999999999999999999999   99999999999999998665   899999999986554322


Q ss_pred             eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCc
Q 045067          222 YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPR  301 (347)
Q Consensus       222 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (347)
                       ......||+.|+|||++.+..++.++||||+||++|+|+ +|+.||........ .......... ...+...      
T Consensus       165 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~~~~-~~~~~~~~~~-i~~~~~~------  234 (325)
T 3kn6_A          165 -PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTML-SGQVPFQSHDRSLT-CTSAVEIMKK-IKKGDFS------  234 (325)
T ss_dssp             --------------------CCCCHHHHHHHHHHHHHHHH-HSSCTTC--------CCCHHHHHHH-HTTTCCC------
T ss_pred             -cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHH-hCCCCCCCCccccc-cccHHHHHHH-HHcCCCC------
Confidence             223467899999999999999999999999999999999 89999975432111 1111122222 2221110      


Q ss_pred             cCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          302 IIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       302 ~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . ........++++.+++.+||+.||++|||+.|+++
T Consensus       235 ~-~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  270 (325)
T 3kn6_A          235 F-EGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY  270 (325)
T ss_dssp             C-CSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred             C-CcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence            0 11122234567899999999999999999998863


No 131
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00  E-value=2.6e-45  Score=326.02  Aligned_cols=259  Identities=19%  Similarity=0.209  Sum_probs=195.2

Q ss_pred             ccCCCCCeecccCceEEEEEEeC-CceEEEEEEccCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           62 NNYHYRNIITESSIFRLCQGVLP-DRTISVVKFIDGSV-FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~~v~k~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      ++|...+.||+|+||+||+|... +..+|+|++..... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence            46888899999999999999994 55566665543322 22236788999999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG  219 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  219 (347)
                      +++ +|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++......
T Consensus        82 ~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~  153 (288)
T 1ob3_A           82 LDQ-DLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP  153 (288)
T ss_dssp             CSE-EHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-
T ss_pred             cCC-CHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc
Confidence            985 999998753    357999999999999999999999   999999999999999999999999999998765432


Q ss_pred             CceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh---ccC--
Q 045067          220 ETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE---NRG--  293 (347)
Q Consensus       220 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~--  293 (347)
                      .. ......||+.|+|||++.+ ..++.++||||+||++|+|+ +|.+||.....        .........   ...  
T Consensus       154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~  223 (288)
T 1ob3_A          154 VR-KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMV-NGTPLFPGVSE--------ADQLMRIFRILGTPNSK  223 (288)
T ss_dssp             ---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHHHHHCCCCTT
T ss_pred             cc-ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHHHHCCCChh
Confidence            21 1234568999999998875 46899999999999999999 89999964321        111111111   000  


Q ss_pred             -ccc-----ccCCccC------CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          294 -FNG-----IVDPRII------GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       294 -~~~-----~~~~~~~------~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       +..     ..++...      ........++++.+++.+||+.||++|||+.|+++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          224 NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence             000     0000000      00111223557889999999999999999999985


No 132
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00  E-value=3e-45  Score=331.40  Aligned_cols=261  Identities=21%  Similarity=0.308  Sum_probs=201.9

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCc-eE--EEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDR-TI--SVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~--~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ++|...+.||+|+||.||+|.. .++ .+  ++|.+.........+.+.+|+.+++++ +||||+++++++.+.+..++|
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv  104 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA  104 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence            5788899999999999999998 333 32  455444433344456789999999999 899999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhc-----------cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCce
Q 045067          137 FESAEYGNLHDLLKRSY-----------QSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP  205 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~-----------~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~  205 (347)
                      |||+++|+|.+++....           ......+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+
T Consensus       105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~  181 (327)
T 1fvr_A          105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA  181 (327)
T ss_dssp             ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred             EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence            99999999999997641           012347999999999999999999999   9999999999999999999999


Q ss_pred             EEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHH
Q 045067          206 KLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFV  285 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  285 (347)
                      ||+|||++.......  ......+++.|+|||.+.+..++.++|||||||++|+|++.|..||.....        ....
T Consensus       182 kL~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--------~~~~  251 (327)
T 1fvr_A          182 KIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--------AELY  251 (327)
T ss_dssp             EECCTTCEESSCEEC--CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHH
T ss_pred             EEcccCcCccccccc--cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--------HHHH
Confidence            999999987443211  122345788999999999889999999999999999999339999964321        1111


Q ss_pred             HHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                       .....+..     ...     ....+..+.+++.+||+.+|.+|||+.++++.|+++.++
T Consensus       252 -~~~~~~~~-----~~~-----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~  301 (327)
T 1fvr_A          252 -EKLPQGYR-----LEK-----PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  301 (327)
T ss_dssp             -HHGGGTCC-----CCC-----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             -HHhhcCCC-----CCC-----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence             11111110     000     112245688999999999999999999999999998764


No 133
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00  E-value=1.6e-44  Score=319.97  Aligned_cols=252  Identities=20%  Similarity=0.258  Sum_probs=201.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccC-C-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDG-S-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~-~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|.... . .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            357889999999999999999998 4444444444432 2 233456788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc---eEEecCCCC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV---PKLFNFSLS  213 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~---~kl~Dfg~a  213 (347)
                      |||+++++|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.   +||+|||++
T Consensus        84 ~e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~  155 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAR-----EFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA  155 (284)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred             EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceee
Confidence            9999999999998875     67999999999999999999999   999999999999999986655   999999999


Q ss_pred             ccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ........  .....||+.|+|||.+.+..++.++||||+|+++|+|+ +|+.||.....        ....... ..+.
T Consensus       156 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~--------~~~~~~~-~~~~  223 (284)
T 3kk8_A          156 IEVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL-VGYPPFWDEDQ--------HRLYAQI-KAGA  223 (284)
T ss_dssp             EECCSSCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHH-HHTC
T ss_pred             EEcccCcc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHH-HCCCCCCCCch--------hHHHHHH-Hhcc
Confidence            77654332  23467999999999999999999999999999999999 99999964321        1222222 2211


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .. ...+      .....++.+.+++.+||+.||++|||+.|+++
T Consensus       224 ~~-~~~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          224 YD-YPSP------EWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             CC-CCTT------TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cc-CCch------hhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            11 0000      01123456889999999999999999999986


No 134
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00  E-value=2.3e-45  Score=329.96  Aligned_cols=243  Identities=16%  Similarity=0.079  Sum_probs=188.0

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCce-EEEEEEccCC-CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRT-ISVVKFIDGS-VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~-~~v~k~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ++|+..+.||+|+||+||+|.. .++. +|+|++.... ..........|+..+.++ +||||+++++++.+++..++||
T Consensus        57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~  136 (311)
T 3p1a_A           57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT  136 (311)
T ss_dssp             HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence            6799999999999999999999 4454 5555443332 223334566677666666 8999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+ +++|.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus       137 e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~  208 (311)
T 3p1a_A          137 ELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELG  208 (311)
T ss_dssp             ECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC
T ss_pred             ecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecc
Confidence            999 56999998764    256999999999999999999999   8999999999999999999999999999987764


Q ss_pred             CCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCC-CccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGE-DLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ....  .....||+.|+|||++.+ .++.++|||||||++|||+ +|. +|+...            .. .....+..  
T Consensus       209 ~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~-~g~~~~~~~~------------~~-~~~~~~~~--  269 (311)
T 3p1a_A          209 TAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVA-CNMELPHGGE------------GW-QQLRQGYL--  269 (311)
T ss_dssp             --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHH-HTCCCCSSHH------------HH-HHHTTTCC--
T ss_pred             cCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHH-hCCCCCCCcc------------HH-HHHhccCC--
Confidence            4322  234569999999998876 6899999999999999999 664 444211            01 11111111  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                             ........++++.+++.+||+.||++|||+.|+++
T Consensus       270 -------~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          270 -------PPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             -------CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -------CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence                   11122233567889999999999999999999986


No 135
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00  E-value=1.7e-45  Score=341.73  Aligned_cols=273  Identities=15%  Similarity=0.166  Sum_probs=209.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC--ccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE--IPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~~lv  136 (347)
                      .+.|...+.||+|+||+||+|.+ .++..+++|++. .......+.+.+|+.++++++||||+++++++.+..  ..++|
T Consensus         8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv   87 (396)
T 4eut_A            8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI   87 (396)
T ss_dssp             SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred             CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence            35688899999999999999999 445445555444 333334577889999999999999999999988765  77999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE----CCCCceEEecCCC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV----SERYVPKLFNFSL  212 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill----~~~~~~kl~Dfg~  212 (347)
                      |||+++|+|.+++....  ....+++..+..++.|++.||+|||   +.+|+||||||+|||+    +.++.+||+|||+
T Consensus        88 ~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~  162 (396)
T 4eut_A           88 MEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA  162 (396)
T ss_dssp             ECCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred             EecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence            99999999999997641  1234999999999999999999999   9999999999999999    7888899999999


Q ss_pred             CccCCCCCceeeccccccCCccccccccc--------CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHH
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYART--------GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDF  284 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  284 (347)
                      ++.......  .....||+.|+|||++.+        ..++.++|||||||++|||+ +|+.||......    ......
T Consensus       163 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~-tg~~Pf~~~~~~----~~~~~~  235 (396)
T 4eut_A          163 ARELEDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA-TGSLPFRPFEGP----RRNKEV  235 (396)
T ss_dssp             CEECCCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHH-HSSCSEECTTCT----TTCHHH
T ss_pred             ceEccCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHH-HCCCCCCCCCcc----cchHHH
Confidence            987654322  234679999999998765        56788999999999999999 899999753321    112233


Q ss_pred             HHHHHhccCccc---c---------cCCccC-CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          285 VKKYIENRGFNG---I---------VDPRII-GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       285 ~~~~~~~~~~~~---~---------~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ............   .         +...+. ...........+.+++.+||+.||++|||+.|+++.++++.+
T Consensus       236 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~  309 (396)
T 4eut_A          236 MYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH  309 (396)
T ss_dssp             HHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred             HHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence            333332211100   0         000111 112234567788999999999999999999999999999865


No 136
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00  E-value=1.9e-45  Score=330.53  Aligned_cols=258  Identities=17%  Similarity=0.268  Sum_probs=194.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc---
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP---  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---  133 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|++....   ....+.+.+|+.++++++||||+++++++......   
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~   90 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL   90 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence            46788999999999999999998 555555555554432   23345788999999999999999999998876544   


Q ss_pred             -EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          134 -VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       134 -~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                       ++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        91 ~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~  162 (311)
T 3ork_A           91 PYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGI  162 (311)
T ss_dssp             EEEEEECCCEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred             cEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccC
Confidence             9999999999999999875     67999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCce--eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          213 SASIPEGETY--IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       213 a~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      +.........  ......||+.|+|||.+.+..++.++|||||||++|+|+ +|+.||.....        .........
T Consensus       163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll-~g~~pf~~~~~--------~~~~~~~~~  233 (311)
T 3ork_A          163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL-TGEPPFTGDSP--------VSVAYQHVR  233 (311)
T ss_dssp             C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHHH
T ss_pred             cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCCh--------HHHHHHHhc
Confidence            9876543221  223456899999999999999999999999999999999 89999964321        122222222


Q ss_pred             ccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHH-HHHHHHHH
Q 045067          291 NRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMID-VAKQIKKM  343 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~e-ll~~L~~i  343 (347)
                      .....        ........+.++.+++.+||+.||++||++.+ +...+.++
T Consensus       234 ~~~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          234 EDPIP--------PSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             CCCCC--------HHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             CCCCC--------cccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            21110        00111123456889999999999999997555 44555444


No 137
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00  E-value=2.5e-45  Score=330.21  Aligned_cols=262  Identities=21%  Similarity=0.256  Sum_probs=195.0

Q ss_pred             hccCCC-CCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEEE
Q 045067           61 TNNYHY-RNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        61 ~~~~~~-~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .+.|.. .+.||+|+||+||+|.. .++..+++|.+........+.+.+|+.++.++ +||||+++++++.+++..++||
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~   90 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF   90 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence            345666 37899999999999998 44555555555444444457899999999985 7999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc---eEEecCCCCc
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV---PKLFNFSLSA  214 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~---~kl~Dfg~a~  214 (347)
                      ||+++|+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.   +||+|||++.
T Consensus        91 e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~  162 (316)
T 2ac3_A           91 EKMRGGSILSHIHKR-----RHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGS  162 (316)
T ss_dssp             ECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC
T ss_pred             EcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCcc
Confidence            999999999999875     67999999999999999999999   999999999999999998776   9999999987


Q ss_pred             cCCCCCc------eeeccccccCCccccccccc-----CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCc----
Q 045067          215 SIPEGET------YIDDGVKGTSGIVAPEYART-----GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDES----  279 (347)
Q Consensus       215 ~~~~~~~------~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~----  279 (347)
                      .......      .......||+.|+|||++.+     ..++.++|||||||++|+|+ +|+.||...........    
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~~~~~  241 (316)
T 2ac3_A          163 GIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL-SGYPPFVGRCGSDCGWDRGEA  241 (316)
T ss_dssp             -------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHH-HSSCSCCCCCCSCSCC----C
T ss_pred             ccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHH-HCCCCCccccccccccccccc
Confidence            6543211      11123569999999998875     56889999999999999999 89999976433111000    


Q ss_pred             --hHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          280 --FEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       280 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                        ............+...      . ........+..+.+++.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~~~i~~~~~~------~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          242 CPACQNMLFESIQEGKYE------F-PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             CHHHHHHHHHHHHHCCCC------C-CHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             chhHHHHHHHHHhccCcc------c-CchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence              0011111122221110      0 00111123457889999999999999999999987


No 138
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00  E-value=1e-45  Score=335.60  Aligned_cols=243  Identities=20%  Similarity=0.224  Sum_probs=198.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--------chhHHHHHHHHHHHHhcCCCceeeeeeeeeeC
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--------FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV  130 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  130 (347)
                      ..++|...+.||+|+||+||+|.. .++..+++|.+....        ....+.+.+|+.++++++||||+++++++.+.
T Consensus        22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~  101 (335)
T 3dls_A           22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ  101 (335)
T ss_dssp             HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred             cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence            467899999999999999999998 555555555444332        11234677899999999999999999999999


Q ss_pred             CccEEEEEeCCCC-CHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEec
Q 045067          131 EIPVLVFESAEYG-NLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFN  209 (347)
Q Consensus       131 ~~~~lv~e~~~~g-~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~D  209 (347)
                      +..++||||+.+| +|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|
T Consensus       102 ~~~~lv~e~~~~g~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~D  173 (335)
T 3dls_A          102 GFFQLVMEKHGSGLDLFAFIDRH-----PRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLID  173 (335)
T ss_dssp             SEEEEEEECCTTSCBHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECC
T ss_pred             CEEEEEEEeCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEee
Confidence            9999999999776 999999864     57999999999999999999999   99999999999999999999999999


Q ss_pred             CCCCccCCCCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          210 FSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       210 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      ||++........  .....||+.|+|||++.+..+ +.++|||||||++|+|+ +|..||.....               
T Consensus       174 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~---------------  235 (335)
T 3dls_A          174 FGSAAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLV-FEENPFCELEE---------------  235 (335)
T ss_dssp             CTTCEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHH-HSSCSCSSGGG---------------
T ss_pred             cccceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHH-hCCCchhhHHH---------------
Confidence            999987654432  234579999999999888776 88999999999999999 99999964221               


Q ss_pred             HhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                              ........+.   ..+.++.+++.+||+.||++|||+.++++.
T Consensus       236 --------~~~~~~~~~~---~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          236 --------TVEAAIHPPY---LVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             --------GTTTCCCCSS---CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             --------HHhhccCCCc---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                    0000011111   124467899999999999999999999873


No 139
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00  E-value=1.6e-45  Score=334.94  Aligned_cols=253  Identities=21%  Similarity=0.246  Sum_probs=199.3

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEE
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ...++|...+.||+|+||.||+|.. .++..+++|++.....    ...+|+.++.++ +||||+++++++.+++..++|
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv   94 (342)
T 2qr7_A           19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV   94 (342)
T ss_dssp             CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred             CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence            3467899999999999999999999 5566666666554432    245788888888 799999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC----CceEEecCCC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER----YVPKLFNFSL  212 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~----~~~kl~Dfg~  212 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||+..+    +.+||+|||+
T Consensus        95 ~E~~~gg~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~  166 (342)
T 2qr7_A           95 TELMKGGELLDKILRQ-----KFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGF  166 (342)
T ss_dssp             ECCCCSCBHHHHHHTC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTT
T ss_pred             EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCC
Confidence            9999999999999764     67999999999999999999999   9999999999999998533    3599999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      +........ .....+||+.|+|||++.+..++.++||||+||++|+|+ +|.+||.....     .......... ..+
T Consensus       167 a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~-----~~~~~~~~~i-~~~  238 (342)
T 2qr7_A          167 AKQLRAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML-TGYTPFANGPD-----DTPEEILARI-GSG  238 (342)
T ss_dssp             CEECBCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HSSCSSCSSTT-----SCHHHHHHHH-HHC
T ss_pred             cccCcCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHh-cCCCCCCCCCc-----CCHHHHHHHH-ccC
Confidence            987654322 233467899999999998888899999999999999999 89999964211     1122222222 222


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ... . .     .......+.++.+++.+||+.||++|||+.++++
T Consensus       239 ~~~-~-~-----~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          239 KFS-L-S-----GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             CCC-C-C-----STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             Ccc-c-C-----ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            211 0 0     0111223456889999999999999999999875


No 140
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00  E-value=4.4e-45  Score=327.85  Aligned_cols=263  Identities=19%  Similarity=0.220  Sum_probs=194.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGSV-FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .++|...+.||+|+||+||+|.. . +..+++|++..... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            35788899999999999999999 4 44455555544332 223466889999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++....
T Consensus        82 e~~~~~~l~~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  153 (311)
T 4agu_A           82 EYCDHTVLHELDRYQ-----RGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLT  153 (311)
T ss_dssp             ECCSEEHHHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EeCCCchHHHHHhhh-----cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhcc
Confidence            999999999988754     67999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH--------
Q 045067          218 EGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY--------  288 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------  288 (347)
                      .... ......||+.|+|||.+.+ ..++.++||||+|+++|+|+ +|.+||.....     ..........        
T Consensus       154 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~  226 (311)
T 4agu_A          154 GPSD-YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL-SGVPLWPGKSD-----VDQLYLIRKTLGDLIPRH  226 (311)
T ss_dssp             -------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH-----HHHHHHHHHHHCSCCHHH
T ss_pred             Cccc-ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCCH-----HHHHHHHHHHhccccccc
Confidence            3322 2234578999999998876 67899999999999999999 89999965322     0011111111        


Q ss_pred             ---Hhcc-Ccc--cccCCccCCc--hhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          289 ---IENR-GFN--GIVDPRIIGD--ELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       289 ---~~~~-~~~--~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                         +... ...  ...++.....  ...+..+..+.+++.+||+.||++|||+.|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          227 QQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             ccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence               0000 000  0111110000  011223456889999999999999999999985


No 141
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00  E-value=8.6e-45  Score=321.51  Aligned_cols=250  Identities=20%  Similarity=0.258  Sum_probs=201.1

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeee---------
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE---------  129 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------  129 (347)
                      ..++|...+.||+|+||.||+|.+ .++..+++|......    +.+.+|+.++++++||||+++++++..         
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B            9 FGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             hccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            456788999999999999999999 345555555444432    457799999999999999999998864         


Q ss_pred             -------CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC
Q 045067          130 -------VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER  202 (347)
Q Consensus       130 -------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~  202 (347)
                             ....++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.+
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~  158 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDT  158 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEET
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCC
Confidence                   44589999999999999999764   2357999999999999999999999   9999999999999999999


Q ss_pred             CceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHH
Q 045067          203 YVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEM  282 (347)
Q Consensus       203 ~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~  282 (347)
                      +.+||+|||++........  .....||+.|+|||.+.+..++.++||||||+++|+|+ +|..|+...          .
T Consensus       159 ~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~~~~~~~~~----------~  225 (284)
T 2a19_B          159 KQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-HVCDTAFET----------S  225 (284)
T ss_dssp             TEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH-SCCSSHHHH----------H
T ss_pred             CCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH-hcCCcchhH----------H
Confidence            9999999999987654332  23456999999999999999999999999999999999 777776421          1


Q ss_pred             HHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          283 DFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ... .........    .         ..+..+.+++.+||+.||++|||+.|+++.|+.+.++
T Consensus       226 ~~~-~~~~~~~~~----~---------~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~  275 (284)
T 2a19_B          226 KFF-TDLRDGIIS----D---------IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKS  275 (284)
T ss_dssp             HHH-HHHHTTCCC----T---------TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC-
T ss_pred             HHH-HHhhccccc----c---------cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhC
Confidence            111 111111111    1         1234577999999999999999999999999988654


No 142
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00  E-value=1.2e-45  Score=347.91  Aligned_cols=248  Identities=16%  Similarity=0.176  Sum_probs=192.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|++...   .......+.+|+.+++.++||||+++++++.+.+.+++|
T Consensus       147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv  226 (446)
T 4ejn_A          147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV  226 (446)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred             hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence            46799999999999999999998 45555555544321   223346678999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFS-RPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||+|||   + .+|+||||||+|||++.++.+||+|||+++.
T Consensus       227 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~  298 (446)
T 4ejn_A          227 MEYANGGELFFHLSRE-----RVFSEDRARFYGAEIVSALDYLH---SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKE  298 (446)
T ss_dssp             ECCCSSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCT
T ss_pred             EeeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHh---hcCCEEECCCCHHHEEECCCCCEEEccCCCcee
Confidence            9999999999999875     67999999999999999999999   7 8999999999999999999999999999976


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ...... ......||+.|+|||++.+..++.++|||||||++|||+ +|+.||.....        ........... . 
T Consensus       299 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~--------~~~~~~i~~~~-~-  366 (446)
T 4ejn_A          299 GIKDGA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM-CGRLPFYNQDH--------EKLFELILMEE-I-  366 (446)
T ss_dssp             TCC------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHCC-C-
T ss_pred             ccCCCc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHh-hCCCCCCCCCH--------HHHHHHHHhCC-C-
Confidence            443322 234568999999999999999999999999999999999 89999964321        12222222211 1 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-----TMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-----s~~ell~  338 (347)
                           ..     +...++++.+++.+||+.||.+||     |+.|+++
T Consensus       367 -----~~-----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          367 -----RF-----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             -----CC-----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             -----CC-----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence                 00     011245678999999999999999     9999875


No 143
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00  E-value=4.1e-45  Score=345.21  Aligned_cols=246  Identities=20%  Similarity=0.240  Sum_probs=199.9

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ++|...+.||+|+||.||+|.+ .++..+++|++....   ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~   95 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM   95 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            5688899999999999999999 445545555443221   123467899999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++....
T Consensus        96 E~~~gg~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~  167 (476)
T 2y94_A           96 EYVSGGELFDYICKN-----GRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMS  167 (476)
T ss_dssp             ECCSSEEHHHHTTSS-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred             eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence            999999999999764     67999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ....  ....+||+.|+|||++.+..+ +.++||||+||++|+|+ +|..||.....        ........ .+... 
T Consensus       168 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell-tG~~Pf~~~~~--------~~~~~~i~-~~~~~-  234 (476)
T 2y94_A          168 DGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALL-CGTLPFDDDHV--------PTLFKKIC-DGIFY-  234 (476)
T ss_dssp             TTCC--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHH-HSSCSSCCSSS--------HHHHHHHH-TTCCC-
T ss_pred             cccc--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHh-hCCCCCCCCCH--------HHHHHHHh-cCCcC-
Confidence            4332  244679999999999888765 68999999999999999 89999964321        12222222 21110 


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                             .+   ...++.+.+++.+||+.||++|||+.|+++
T Consensus       235 -------~p---~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          235 -------TP---QYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             -------CC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             -------CC---ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence                   00   112346789999999999999999999986


No 144
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00  E-value=4.2e-45  Score=322.41  Aligned_cols=245  Identities=19%  Similarity=0.248  Sum_probs=176.1

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ++|...+.||+|+||.||+|.. .++..+++|.....   .....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus        13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   92 (275)
T 2eue_A           13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI   92 (275)
T ss_dssp             CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence            5799999999999999999998 45555555544432   1223467889999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+ +++|.+.+...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        93 e~~-~~~l~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~  163 (275)
T 2eue_A           93 EYA-GNELFDYIVQR-----DKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMT  163 (275)
T ss_dssp             ECC-CEEHHHHHHTS-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred             hhc-CCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceecc
Confidence            999 56888888764     67999999999999999999999   9999999999999999999999999999997654


Q ss_pred             CCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ....  .....||+.|+|||.+.+..+ +.++||||+||++|+|+ +|+.||.....        ....... ..+... 
T Consensus       164 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~--------~~~~~~~-~~~~~~-  230 (275)
T 2eue_A          164 DGNF--LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVML-CRRLPFDDESI--------PVLFKNI-SNGVYT-  230 (275)
T ss_dssp             -------------CTTCCHHHHCC-----THHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHH-HHTCCC-
T ss_pred             Cccc--ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHH-HhCCCC-
Confidence            4322  234569999999999887765 78999999999999999 89999964321        1122222 221110 


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           .     +...+..+.+++.+||+.||++|||+.|+++
T Consensus       231 -----~-----~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  262 (275)
T 2eue_A          231 -----L-----PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             -----C-----CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -----C-----CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence                 0     0112446789999999999999999999975


No 145
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=7.6e-45  Score=336.46  Aligned_cols=202  Identities=23%  Similarity=0.311  Sum_probs=160.8

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe--CCceEEEEEEccCC-CchhHHHHHHHHHHHHhcC-CCceeeeeeeeeeCC--c
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL--PDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMS-HNNVLRLIGCCLEVE--I  132 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~--~  132 (347)
                      ...++|...+.||+|+||.||+|..  .+..+|+|++.... .....+.+.+|+.++.++. ||||+++++++..++  .
T Consensus         6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A            6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred             cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence            3567899999999999999999998  34556666554332 2344567889999999997 999999999997544  7


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      +++||||++ |+|.+++..      ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        86 ~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~  155 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGL  155 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcc
Confidence            899999998 599999976      57999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCC--------------------ceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccC
Q 045067          213 SASIPEGE--------------------TYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMG  271 (347)
Q Consensus       213 a~~~~~~~--------------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~  271 (347)
                      ++......                    ........||+.|+|||++.+ ..++.++||||+||++|||+ +|++||...
T Consensus       156 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~  234 (388)
T 3oz6_A          156 SRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL-CGKPIFPGS  234 (388)
T ss_dssp             CEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HSSCSCCCS
T ss_pred             cccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHH-hCCCCCCCC
Confidence            97653211                    111234679999999998876 67899999999999999999 999999753


No 146
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00  E-value=8.4e-45  Score=337.17  Aligned_cols=253  Identities=16%  Similarity=0.220  Sum_probs=189.0

Q ss_pred             hccCCCC-CeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHh-cCCCceeeeeeeeee----CCcc
Q 045067           61 TNNYHYR-NIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQ-MSHNNVLRLIGCCLE----VEIP  133 (347)
Q Consensus        61 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~~  133 (347)
                      .++|... ++||+|+||+||+|.. .++..+++|++...     ..+.+|+.++.+ .+||||+++++++..    ...+
T Consensus        60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~  134 (400)
T 1nxk_A           60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL  134 (400)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence            3456554 6899999999999999 55555555555432     457789988755 489999999999876    5678


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC---CCceEEecC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE---RYVPKLFNF  210 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~---~~~~kl~Df  210 (347)
                      ++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.   ++.+||+||
T Consensus       135 ~lv~E~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DF  208 (400)
T 1nxk_A          135 LIVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDF  208 (400)
T ss_dssp             EEEEECCCSEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred             EEEEEeCCCCcHHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEec
Confidence            9999999999999999763   2246999999999999999999999   999999999999999997   789999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      |+++.......  ....+||+.|+|||++.+..++.++|||||||++|+|+ +|+.||.............     ....
T Consensus       209 G~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~~~~~~~~~-----~~i~  280 (400)
T 1nxk_A          209 GFAKETTSHNS--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL-CGYPPFYSNHGLAISPGMK-----TRIR  280 (400)
T ss_dssp             TTCEECC-------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH-HSSCSCCCCTTCSSCCSHH-----HHHH
T ss_pred             ccccccCCCCc--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH-hCCCCCCCCccccccHHHH-----HHHH
Confidence            99987653322  23567899999999999999999999999999999999 9999997543311111111     1111


Q ss_pred             ccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          291 NRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                      .+... ...+      .....+.++.+|+.+||+.||++|||+.|+++.
T Consensus       281 ~~~~~-~~~~------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          281 MGQYE-FPNP------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HTCCC-CCTT------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cCccc-CCCc------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            11110 0000      111234568899999999999999999999873


No 147
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00  E-value=1.2e-44  Score=325.50  Aligned_cols=270  Identities=22%  Similarity=0.333  Sum_probs=200.3

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEe-C---CceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeee
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVL-P---DRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE  129 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~---~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  129 (347)
                      ++....++|...+.||+|+||.||+|.. .   .+..+++|.+...  .....+.+.+|+.++++++||||+++++++.+
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~  107 (313)
T 3brb_A           28 DVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIE  107 (313)
T ss_dssp             TTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC
T ss_pred             hcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEee
Confidence            3444567788889999999999999987 2   3334555555433  23345678999999999999999999999887


Q ss_pred             CC-----ccEEEEEeCCCCCHHHHHhhhcc-CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC
Q 045067          130 VE-----IPVLVFESAEYGNLHDLLKRSYQ-SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY  203 (347)
Q Consensus       130 ~~-----~~~lv~e~~~~g~L~~~l~~~~~-~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~  203 (347)
                      ..     ..++||||+++|+|.+++..... .....+++..+..++.|++.||.|||   +.+|+||||||+||+++.++
T Consensus       108 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~  184 (313)
T 3brb_A          108 MSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDM  184 (313)
T ss_dssp             -------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTS
T ss_pred             ccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCC
Confidence            55     35999999999999999854211 23356999999999999999999999   99999999999999999999


Q ss_pred             ceEEecCCCCccCCCCCce-eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHH
Q 045067          204 VPKLFNFSLSASIPEGETY-IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEM  282 (347)
Q Consensus       204 ~~kl~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~  282 (347)
                      .+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|++.|.+||.....     .   
T Consensus       185 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~---  256 (313)
T 3brb_A          185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN-----H---  256 (313)
T ss_dssp             CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG-----G---
T ss_pred             cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH-----H---
Confidence            9999999999776543221 123345788999999999999999999999999999999449999965322     1   


Q ss_pred             HHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHhC
Q 045067          283 DFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKSF  347 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~~  347 (347)
                      ......... ...     .     .....+..+.+++.+||+.||.+|||+.++++.|+++.+++
T Consensus       257 ~~~~~~~~~-~~~-----~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l  310 (313)
T 3brb_A          257 EMYDYLLHG-HRL-----K-----QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL  310 (313)
T ss_dssp             GHHHHHHTT-CCC-----C-----CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHcC-CCC-----C-----CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence            111111111 110     0     01123456889999999999999999999999999998764


No 148
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00  E-value=9.4e-45  Score=353.67  Aligned_cols=251  Identities=22%  Similarity=0.321  Sum_probs=197.2

Q ss_pred             eecccCceEEEEEEe---CCceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeCCCCC
Q 045067           69 IITESSIFRLCQGVL---PDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEYGN  144 (347)
Q Consensus        69 ~lg~G~~g~Vy~~~~---~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~  144 (347)
                      .||+|+||.||+|.+   .++..+++|.+... .....+.+.+|+.++++++||||+++++++.+ +..++||||+++|+
T Consensus       343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~  421 (613)
T 2ozo_A          343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP  421 (613)
T ss_dssp             EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred             EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence            799999999999987   24444555555443 33455789999999999999999999999876 56899999999999


Q ss_pred             HHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCCcee-
Q 045067          145 LHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYI-  223 (347)
Q Consensus       145 L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~-  223 (347)
                      |.+++...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++......... 
T Consensus       422 L~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~  494 (613)
T 2ozo_A          422 LHKFLVGK----REEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT  494 (613)
T ss_dssp             HHHHHTTC----TTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-------
T ss_pred             HHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee
Confidence            99999652    356999999999999999999999   9999999999999999999999999999998765433221 


Q ss_pred             -eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCcc
Q 045067          224 -DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRI  302 (347)
Q Consensus       224 -~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (347)
                       .....+|+.|+|||++.+..++.++|||||||++|||++.|+.||.....        ..... ....+..       +
T Consensus       495 ~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~~~~-~i~~~~~-------~  558 (613)
T 2ozo_A          495 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--------PEVMA-FIEQGKR-------M  558 (613)
T ss_dssp             -------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--------HHHHH-HHHTTCC-------C
T ss_pred             eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--------HHHHH-HHHcCCC-------C
Confidence             12344678999999999999999999999999999999449999975322        11222 2222211       0


Q ss_pred             CCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          303 IGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       303 ~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      .   .+...+.++.+++.+||+.+|++|||+.+|++.|+.+..+
T Consensus       559 ~---~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  599 (613)
T 2ozo_A          559 E---CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  599 (613)
T ss_dssp             C---CCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             C---CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            0   1112345788999999999999999999999999998654


No 149
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00  E-value=2e-44  Score=319.15  Aligned_cols=257  Identities=18%  Similarity=0.236  Sum_probs=201.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCCC-----chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGSV-----FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      .++|...+.||+|+||.||+|.. .++ .+++|.+.....     ....+.+.+|+.++++++||||+++++++.+.+..
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV   83 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence            45688899999999999999999 344 455444433221     11347799999999999999999999999999999


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC----ceEEec
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY----VPKLFN  209 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~----~~kl~D  209 (347)
                      ++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++    .+||+|
T Consensus        84 ~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~d  155 (283)
T 3bhy_A           84 VLILELVSGGELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLID  155 (283)
T ss_dssp             EEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECC
T ss_pred             EEEEeecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEe
Confidence            9999999999999999765     67999999999999999999999   99999999999999999877    899999


Q ss_pred             CCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          210 FSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       210 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      ||++........  .....||+.|+|||.+.+..++.++||||||+++|+|+ +|..||.....        ....... 
T Consensus       156 fg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~--------~~~~~~~-  223 (283)
T 3bhy_A          156 FGIAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILL-SGASPFLGETK--------QETLTNI-  223 (283)
T ss_dssp             CTTCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCCSSH--------HHHHHHH-
T ss_pred             cccceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHH-HCCCCCCCcch--------HHHHHHh-
Confidence            999987654322  23456899999999999899999999999999999999 89999964321        1111111 


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH--HHHHHH
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK--QIKKMY  344 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~--~L~~i~  344 (347)
                      .....      .. ........+..+.+++.+||+.||++|||+.|+++  .++.+.
T Consensus       224 ~~~~~------~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          224 SAVNY------DF-DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             HTTCC------CC-CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             Hhccc------CC-cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            11110      00 01111223456889999999999999999999997  566554


No 150
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00  E-value=9e-45  Score=330.93  Aligned_cols=247  Identities=23%  Similarity=0.283  Sum_probs=196.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC-C--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS-V--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~-~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .+.|...+.||+|+||+||+|.. .++..+++|.+... .  ....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            35588889999999999999998 45554444444332 2  23346789999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+. |+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus       133 ~e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~  204 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM  204 (348)
T ss_dssp             EECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSS
T ss_pred             EecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceec
Confidence            99998 5888888653    267999999999999999999999   999999999999999999999999999999765


Q ss_pred             CCCCceeeccccccCCcccccccc---cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYAR---TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ...     ....||+.|+|||++.   +..++.++|||||||++|||+ +|++||.....        ............
T Consensus       205 ~~~-----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell-~g~~p~~~~~~--------~~~~~~~~~~~~  270 (348)
T 1u5q_A          205 APA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA-ERKPPLFNMNA--------MSALYHIAQNES  270 (348)
T ss_dssp             SSB-----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCH--------HHHHHHHHHSCC
T ss_pred             CCC-----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCh--------HHHHHHHHhcCC
Confidence            432     2357999999999874   567899999999999999999 89999864221        122222222211


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                            +....    ...+..+.+++.+||+.||++|||+.++++.
T Consensus       271 ------~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h  306 (348)
T 1u5q_A          271 ------PALQS----GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  306 (348)
T ss_dssp             ------CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred             ------CCCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence                  11111    1124467899999999999999999999753


No 151
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00  E-value=7.2e-45  Score=321.56  Aligned_cols=247  Identities=19%  Similarity=0.287  Sum_probs=197.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||+||+|.. .++..+++|+.....   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (279)
T 3fdn_A            8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   87 (279)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence            46788999999999999999998 555555555443221   12235688999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.++|+|||++...
T Consensus        88 ~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~  159 (279)
T 3fdn_A           88 LEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHA  159 (279)
T ss_dssp             ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC
T ss_pred             EecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccC
Confidence            9999999999999875     67999999999999999999999   999999999999999999999999999988654


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ....   .....||+.|+|||.+.+..++.++||||+|+++|+|+ +|..||.....        ....... .....  
T Consensus       160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~--------~~~~~~~-~~~~~--  224 (279)
T 3fdn_A          160 PSSR---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL-VGKPPFEANTY--------QETYKRI-SRVEF--  224 (279)
T ss_dssp             -----------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCTTCCSSH--------HHHHHHH-HHTCC--
T ss_pred             Cccc---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHH-HCCCCCCCCcH--------HHHHHHH-HhCCC--
Confidence            4322   23457899999999999999999999999999999999 89999964321        1111111 11110  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                          ..     +...+..+.+++.+||+.||++|||+.|+++.
T Consensus       225 ----~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          225 ----TF-----PDFVTEGARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             ----CC-----CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             ----CC-----CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence                00     01123467899999999999999999999863


No 152
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00  E-value=4.6e-45  Score=322.63  Aligned_cols=255  Identities=22%  Similarity=0.297  Sum_probs=197.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC-CccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV-EIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~lv~e  138 (347)
                      ..++|...+.||+|+||+||+|...+..+++|.+. ...  ..+.+.+|+.++++++||||+++++++.+. +..++|||
T Consensus        19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~-~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e   95 (278)
T 1byg_A           19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIK-NDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   95 (278)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECC-CCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred             ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEec-chh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence            35678999999999999999999876666655543 322  347789999999999999999999987654 47899999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++++|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus        96 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~  169 (278)
T 1byg_A           96 YMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS  169 (278)
T ss_dssp             CCTTEEHHHHHHHH---HHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred             cCCCCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence            99999999999764   1123889999999999999999999   99999999999999999999999999999876543


Q ss_pred             CCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccccc
Q 045067          219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIV  298 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      ..    ....+++.|+|||.+.+..++.++||||||+++|+|++.|+.||.....     .   ..... ...+..    
T Consensus       170 ~~----~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~-----~---~~~~~-~~~~~~----  232 (278)
T 1byg_A          170 TQ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----K---DVVPR-VEKGYK----  232 (278)
T ss_dssp             ----------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG-----G---GHHHH-HTTTCC----
T ss_pred             cc----cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----H---HHHHH-HhcCCC----
Confidence            22    2345788999999999899999999999999999999449999964321     1   11111 111110    


Q ss_pred             CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          299 DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                       ...     ....++.+.+++.+||+.||++|||+.++++.|+++...
T Consensus       233 -~~~-----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          233 -MDA-----PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             -CCC-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             -CCC-----cccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence             011     112345688999999999999999999999999999763


No 153
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00  E-value=2.4e-44  Score=322.74  Aligned_cols=261  Identities=19%  Similarity=0.194  Sum_probs=195.0

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCce-EEEEEEccCC----CchhHHHHHHHHHHHHhcC---CCceeeeeeeeeeC
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRT-ISVVKFIDGS----VFDAYDCCFNNIVFASQMS---HNNVLRLIGCCLEV  130 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~-~~v~k~~~~~----~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~  130 (347)
                      ..++|...+.||+|+||+||+|.. .++. +|+|.+....    .......+.+|+.++++++   ||||+++++++...
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~   86 (308)
T 3g33_A            7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS   86 (308)
T ss_dssp             ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence            467899999999999999999998 4444 5555443221    1112245778888887764   99999999999876


Q ss_pred             C-----ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCce
Q 045067          131 E-----IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP  205 (347)
Q Consensus       131 ~-----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~  205 (347)
                      .     ..++||||+. ++|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~  159 (308)
T 3g33_A           87 RTDREIKVTLVFEHVD-QDLRTYLDKA---PPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTV  159 (308)
T ss_dssp             CSSSEEEEEEEEECCC-CBHHHHHHTC---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCE
T ss_pred             CCCCceeEEEEehhhh-cCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCE
Confidence            5     5799999998 5999999864   2244999999999999999999999   9999999999999999999999


Q ss_pred             EEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHH
Q 045067          206 KLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFV  285 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  285 (347)
                      ||+|||++........  .....||+.|+|||++.+..++.++|||||||++|+|+ +|++||.....        ....
T Consensus       160 kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~--------~~~~  228 (308)
T 3g33_A          160 KLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF-RRKPLFCGNSE--------ADQL  228 (308)
T ss_dssp             EECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTT-TSSCSCCCSSH--------HHHH
T ss_pred             EEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHH-hCCCCCCCCCH--------HHHH
Confidence            9999999976643322  24567899999999999999999999999999999999 99999964321        1222


Q ss_pred             HHHHhc---cC---ccc-------ccCCccCC--chhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          286 KKYIEN---RG---FNG-------IVDPRIIG--DELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       286 ~~~~~~---~~---~~~-------~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ......   ..   +..       .+.+....  ....+..+..+.+++.+||+.||++|||+.|+++
T Consensus       229 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          229 GKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            222211   00   000       00000000  0011123457889999999999999999999986


No 154
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00  E-value=1.2e-44  Score=329.65  Aligned_cols=251  Identities=18%  Similarity=0.268  Sum_probs=191.0

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCC--CceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSH--NNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~lv  136 (347)
                      .+.|...+.||+|+||.||+|...++..+++|.+...  .....+.+.+|+.++.+++|  |||+++++++.+++..++|
T Consensus         8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv   87 (343)
T 3dbq_A            8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV   87 (343)
T ss_dssp             SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence            4568889999999999999999955554555544332  23344678999999999976  9999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      ||+ .+++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++ ++.+||+|||+++..
T Consensus        88 ~e~-~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~  157 (343)
T 3dbq_A           88 MEC-GNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM  157 (343)
T ss_dssp             ECC-CSEEHHHHHHHS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC
T ss_pred             EeC-CCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEE-CCcEEEeeccccccc
Confidence            995 567999999874     67999999999999999999999   99999999999999997 678999999999876


Q ss_pred             CCCCce-eeccccccCCccccccccc-----------CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHH
Q 045067          217 PEGETY-IDDGVKGTSGIVAPEYART-----------GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDF  284 (347)
Q Consensus       217 ~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  284 (347)
                      ...... ......||+.|+|||++.+           ..++.++|||||||++|+|+ +|+.||.....       ....
T Consensus       158 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~-------~~~~  229 (343)
T 3dbq_A          158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT-YGKTPFQQIIN-------QISK  229 (343)
T ss_dssp             ------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH-HSSCTTTTCCS-------HHHH
T ss_pred             CcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH-hCCCcchhhhh-------HHHH
Confidence            543322 2235679999999998865           67899999999999999999 99999964221       1122


Q ss_pred             HHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                      ............ . +        ...+..+.+++.+||+.||.+|||+.|+++.
T Consensus       230 ~~~~~~~~~~~~-~-~--------~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h  274 (343)
T 3dbq_A          230 LHAIIDPNHEIE-F-P--------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  274 (343)
T ss_dssp             HHHHHCTTSCCC-C-C--------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             HHHHhcCCcccC-C-c--------ccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence            222221111000 0 0        0113457899999999999999999999863


No 155
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00  E-value=3.3e-45  Score=322.97  Aligned_cols=253  Identities=20%  Similarity=0.249  Sum_probs=200.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ..++|+..+.||+|+||.||+|.. .++ .+++|.+.........+.+.+|+.+++.++||||+++++++.+++..++||
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   84 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence            456789999999999999999998 344 455544433333344577899999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++....
T Consensus        85 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~  156 (276)
T 2yex_A           85 EYCSGGELFDRIEPD-----IGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFR  156 (276)
T ss_dssp             ECCTTEEGGGGSBTT-----TBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECE
T ss_pred             EecCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccC
Confidence            999999999998753     57999999999999999999999   9999999999999999999999999999997654


Q ss_pred             CCCc-eeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          218 EGET-YIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       218 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .... .......||+.|+|||.+.+..+ +.++||||||+++|+|+ +|..||.....   ..    ............ 
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~---~~----~~~~~~~~~~~~-  227 (276)
T 2yex_A          157 YNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAML-AGELPWDQPSD---SC----QEYSDWKEKKTY-  227 (276)
T ss_dssp             ETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHH-HSSCCCSCSCT---TS----HHHHHHHTTCTT-
T ss_pred             CCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHH-hCCCCCCCCch---HH----HHHHHhhhcccc-
Confidence            3322 12234678999999999887665 78999999999999999 89999975322   00    111111111110 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                        ..       .....+..+.+++.+||+.||++|||+.|+++
T Consensus       228 --~~-------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          228 --LN-------PWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             --ST-------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             --cC-------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence              00       01123456789999999999999999999975


No 156
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00  E-value=1.9e-45  Score=337.92  Aligned_cols=246  Identities=20%  Similarity=0.223  Sum_probs=190.7

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHH-HHhcCCCceeeeeeeeeeCCccEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVF-ASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|++....   ......+.+|..+ ++.++||||+++++++.+.+..|+
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l  116 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF  116 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence            46799999999999999999999 556666666554322   2233556777776 467899999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++.
T Consensus       117 v~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~  188 (373)
T 2r5t_A          117 VLDYINGGELFYHLQRE-----RCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKE  188 (373)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGG
T ss_pred             EEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccc
Confidence            99999999999999875     67999999999999999999999   99999999999999999999999999999976


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ...... .....+||+.|+|||++.+..++.++|||||||++|||+ +|.+||.....        ........... ..
T Consensus       189 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-~G~~Pf~~~~~--------~~~~~~i~~~~-~~  257 (373)
T 2r5t_A          189 NIEHNS-TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML-YGLPPFYSRNT--------AEMYDNILNKP-LQ  257 (373)
T ss_dssp             GBCCCC-CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCTTCCSBH--------HHHHHHHHHSC-CC
T ss_pred             cccCCC-ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHH-cCCCCCCCCCH--------HHHHHHHHhcc-cC
Confidence            432221 234568999999999999999999999999999999999 99999964321        22222322221 10


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDV  336 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~el  336 (347)
                        +.         ...+..+.+++.+||+.||.+||++.+.
T Consensus       258 --~~---------~~~~~~~~~li~~lL~~dp~~R~~~~~~  287 (373)
T 2r5t_A          258 --LK---------PNITNSARHLLEGLLQKDRTKRLGAKDD  287 (373)
T ss_dssp             --CC---------SSSCHHHHHHHHHHTCSSGGGSTTTTTT
T ss_pred             --CC---------CCCCHHHHHHHHHHcccCHHhCCCCCCC
Confidence              01         1124467899999999999999998643


No 157
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00  E-value=4.8e-46  Score=339.19  Aligned_cols=264  Identities=15%  Similarity=0.167  Sum_probs=194.9

Q ss_pred             hccCCCCCeecccCceEEEEEEeC----CceEEEEEEccCCCch-----------hHHHHHHHHHHHHhcCCCceeeeee
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLP----DRTISVVKFIDGSVFD-----------AYDCCFNNIVFASQMSHNNVLRLIG  125 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~~v~k~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~  125 (347)
                      .++|...+.||+|+||.||+|...    ++..+++|........           ....+.+|+..+..++||||+++++
T Consensus        36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~  115 (345)
T 2v62_A           36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG  115 (345)
T ss_dssp             SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred             CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence            367889999999999999999983    4445555554443211           1134667888899999999999999


Q ss_pred             eeee----CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC
Q 045067          126 CCLE----VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE  201 (347)
Q Consensus       126 ~~~~----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~  201 (347)
                      ++.+    ....++||||+ +++|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.
T Consensus       116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~  186 (345)
T 2v62_A          116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQN-----GTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGY  186 (345)
T ss_dssp             EEEEESSSCEEEEEEEECE-EEEHHHHCBGG-----GBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEES
T ss_pred             ccccccCCCcEEEEEEecc-CCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEcc
Confidence            9988    67899999999 88999999875     47999999999999999999999   899999999999999998


Q ss_pred             CC--ceEEecCCCCccCCCCCc------eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCcc
Q 045067          202 RY--VPKLFNFSLSASIPEGET------YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLR  273 (347)
Q Consensus       202 ~~--~~kl~Dfg~a~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~  273 (347)
                      ++  .+||+|||+++.......      .......||+.|+|||++.+..++.++|||||||++|||+ +|+.||.....
T Consensus       187 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell-~g~~pf~~~~~  265 (345)
T 2v62_A          187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWL-CGKLPWEQNLK  265 (345)
T ss_dssp             SSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHH-HSSCTTGGGTT
T ss_pred             CCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHH-hCCCCcccccc
Confidence            77  999999999977643211      1113457999999999999999999999999999999999 89999964211


Q ss_pred             CCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHH
Q 045067          274 LNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKM  343 (347)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i  343 (347)
                          .............. ...........    ....+.++.+++.+||+.||++|||+.+|++.|+++
T Consensus       266 ----~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~  326 (345)
T 2v62_A          266 ----DPVAVQTAKTNLLD-ELPQSVLKWAP----SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH  326 (345)
T ss_dssp             ----CHHHHHHHHHHHHH-TTTHHHHHHSC----TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred             ----ccHHHHHHHHhhcc-cccHHHHhhcc----ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence                11111111111111 01000000000    002345788999999999999999999999999865


No 158
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00  E-value=3.2e-45  Score=330.87  Aligned_cols=261  Identities=16%  Similarity=0.185  Sum_probs=190.5

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEe
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFES  139 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  139 (347)
                      ++|...+.||+|+||+||+|.. .++..+++|.+.. ........+.+|+.++++++||||+++++++.+++..++||||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   81 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   81 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence            5688889999999999999999 4555555554443 2222223466899999999999999999999999999999999


Q ss_pred             CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCC
Q 045067          140 AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEG  219 (347)
Q Consensus       140 ~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~  219 (347)
                      ++ |+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++......
T Consensus        82 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~  153 (324)
T 3mtl_A           82 LD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP  153 (324)
T ss_dssp             CS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC---
T ss_pred             cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCC
Confidence            98 4999998763    356999999999999999999999   999999999999999999999999999998765433


Q ss_pred             CceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccccc
Q 045067          220 ETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIV  298 (347)
Q Consensus       220 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      .. ......||+.|+|||.+.+ ..++.++||||+||++|+|+ +|++||.....     ............. ......
T Consensus       154 ~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~-----~~~~~~i~~~~~~-~~~~~~  225 (324)
T 3mtl_A          154 TK-TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMA-TGRPLFPGSTV-----EEQLHFIFRILGT-PTEETW  225 (324)
T ss_dssp             ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH-----HHHHHHHHHHHCC-CCTTTS
T ss_pred             cc-ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCH-----HHHHHHHHHHhCC-CChHhc
Confidence            22 2234578999999998876 57899999999999999999 89999965321     1111111111111 000000


Q ss_pred             CC-------------ccCCc---hhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          299 DP-------------RIIGD---ELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       299 ~~-------------~~~~~---~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..             .....   ......+.++.+++.+||+.||++|||+.|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          226 PGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             TTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            00             00000   011123457889999999999999999999986


No 159
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00  E-value=1.6e-44  Score=323.26  Aligned_cols=251  Identities=19%  Similarity=0.209  Sum_probs=199.5

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|..........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            456788999999999999999998 4555555555544433334678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE---CCCCceEEecCCCCcc
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV---SERYVPKLFNFSLSAS  215 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~a~~  215 (347)
                      |+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||++   +.++.+||+|||++..
T Consensus        87 ~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~  158 (304)
T 2jam_A           87 LVSGGELFDRILER-----GVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKM  158 (304)
T ss_dssp             CCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred             cCCCccHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence            99999999999765     67999999999999999999999   9999999999999999   7889999999999865


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .....   .....||+.|+|||.+.+..++.++||||+|+++|+|+ +|..||.....        ........ .+...
T Consensus       159 ~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~--------~~~~~~i~-~~~~~  225 (304)
T 2jam_A          159 EQNGI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL-CGYPPFYEETE--------SKLFEKIK-EGYYE  225 (304)
T ss_dssp             CCCBT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHH-HSSCTTTTSCH--------HHHHHHHH-HCCCC
T ss_pred             cCCCc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHH-HCCCCCCCCCH--------HHHHHHHH-cCCCC
Confidence            43321   23356899999999999999999999999999999999 89999964321        12222222 21110


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       . ..     ......+..+.+++.+||+.||++|||+.|+++
T Consensus       226 -~-~~-----~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          226 -F-ES-----PFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             -C-CT-----TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             -C-Cc-----cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             0 00     111123456889999999999999999999986


No 160
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00  E-value=3.3e-44  Score=329.50  Aligned_cols=259  Identities=14%  Similarity=0.149  Sum_probs=203.4

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEE-----e-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC---CCceeeeeee
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGV-----L-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS---HNNVLRLIGC  126 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~-----~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~  126 (347)
                      ++....++|...+.||+|+||+||+|.     . .++..+++|......   ...+.+|+.++.+++   |+||+.++++
T Consensus        59 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~  135 (365)
T 3e7e_A           59 EFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSA  135 (365)
T ss_dssp             EEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEE
T ss_pred             eEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhhee
Confidence            334456778899999999999999994     2 334444455444432   256788888888886   9999999999


Q ss_pred             eeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC-----
Q 045067          127 CLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE-----  201 (347)
Q Consensus       127 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~-----  201 (347)
                      +...+..++||||+++|+|.+++..........+++..+..++.|++.||+|||   +.+|+||||||+|||++.     
T Consensus       136 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~  212 (365)
T 3e7e_A          136 HLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQ  212 (365)
T ss_dssp             EECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC
T ss_pred             eecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCc
Confidence            999999999999999999999997643333467999999999999999999999   999999999999999998     


Q ss_pred             ------CCceEEecCCCCccCCC-CCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccC
Q 045067          202 ------RYVPKLFNFSLSASIPE-GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRL  274 (347)
Q Consensus       202 ------~~~~kl~Dfg~a~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~  274 (347)
                            ++.+||+|||+|+.... ..........||+.|+|||++.+..++.++|||||||++|||+ +|+.||..... 
T Consensus       213 ~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~~-  290 (365)
T 3e7e_A          213 DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCML-FGTYMKVKNEG-  290 (365)
T ss_dssp             ------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHH-HSSCCCEEEET-
T ss_pred             cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHH-hCCCccccCCC-
Confidence                  89999999999976432 2223345577999999999999999999999999999999999 89988864322 


Q ss_pred             CCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCC-CCHHHHHHHHHHHHH
Q 045067          275 NGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDR-PTMIDVAKQIKKMYK  345 (347)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~R-Ps~~ell~~L~~i~~  345 (347)
                       +.              ......+ +..       ...+.+.+++..|++.+|.+| |++.++.+.|+++..
T Consensus       291 -~~--------------~~~~~~~-~~~-------~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~  339 (365)
T 3e7e_A          291 -GE--------------CKPEGLF-RRL-------PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQ  339 (365)
T ss_dssp             -TE--------------EEECSCC-TTC-------SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHH
T ss_pred             -Cc--------------eeechhc-ccc-------CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHH
Confidence             00              0000111 111       113456689999999999999 678899998888764


No 161
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00  E-value=8.9e-45  Score=320.73  Aligned_cols=250  Identities=20%  Similarity=0.268  Sum_probs=179.1

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|......   ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (278)
T 3cok_A            9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL   88 (278)
T ss_dssp             SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred             ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence            346788999999999999999998 445545555443221   1223678999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++..
T Consensus        89 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~  161 (278)
T 3cok_A           89 VLEMCHNGEMNRYLKNR----VKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQ  161 (278)
T ss_dssp             EEECCTTEEHHHHHHTC----SSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEecCCCCcHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceee
Confidence            99999999999999763    357899999999999999999999   99999999999999999999999999999977


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ...... ......||+.|+|||.+.+..++.++||||+|+++|+|+ +|+.||.......        ..    ..    
T Consensus       162 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~~~--------~~----~~----  223 (278)
T 3cok_A          162 LKMPHE-KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLL-IGRPPFDTDTVKN--------TL----NK----  223 (278)
T ss_dssp             CC-----------------------------CTHHHHHHHHHHHHH-HSSCSSCCCSCC---------------------
T ss_pred             ccCCCC-cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHH-hCCCCCCChhHHH--------HH----HH----
Confidence            653322 123456899999999999889999999999999999999 8999997532210        00    00    


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       ........   +...+.++.+++.+||+.||++|||+.++++
T Consensus       224 -~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          224 -VVLADYEM---PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             -CCSSCCCC---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             -HhhcccCC---ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence             00000000   1122456789999999999999999999986


No 162
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00  E-value=6.2e-45  Score=344.20  Aligned_cols=268  Identities=19%  Similarity=0.230  Sum_probs=183.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe--CCceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC-----Cc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL--PDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV-----EI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  132 (347)
                      .++|...+.||+|+||+||+|..  .+..+|+|++.... .....+.+.+|+.++++++||||+++++++...     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~  131 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE  131 (458)
T ss_dssp             CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence            46799999999999999999998  34455566554432 233457789999999999999999999998543     56


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      +|+||||+. |+|.+++...     ..+++..+..++.||+.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       132 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGl  202 (458)
T 3rp9_A          132 LYVVLEIAD-SDFKKLFRTP-----VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGL  202 (458)
T ss_dssp             EEEEECCCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeccc-cchhhhcccC-----CCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeeccccc
Confidence            899999986 6999999764     67999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCc--------------------------eeeccccccCCccccccc-ccCCCCCccchHHHHHHHHHHHhc--
Q 045067          213 SASIPEGET--------------------------YIDDGVKGTSGIVAPEYA-RTGYLNEKCDVYSFGLLLLQLLST--  263 (347)
Q Consensus       213 a~~~~~~~~--------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~el~~~--  263 (347)
                      ++.......                          .......||+.|+|||++ .+..++.++|||||||++|||+ +  
T Consensus       203 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ell-tg~  281 (458)
T 3rp9_A          203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL-NMI  281 (458)
T ss_dssp             CBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-TTS
T ss_pred             chhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHH-Hhc
Confidence            987643211                          112346789999999975 5667999999999999999999 6  


Q ss_pred             ---------CCCccccCccCCCCCc------------hHHHHHHHHHh---ccC--------------cccccCCc--cC
Q 045067          264 ---------GEDLFNMGLRLNGDES------------FEMDFVKKYIE---NRG--------------FNGIVDPR--II  303 (347)
Q Consensus       264 ---------g~~p~~~~~~~~~~~~------------~~~~~~~~~~~---~~~--------------~~~~~~~~--~~  303 (347)
                               ++++|...........            .....+.....   ...              ....+...  ..
T Consensus       282 ~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (458)
T 3rp9_A          282 KENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD  361 (458)
T ss_dssp             TTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCC
T ss_pred             cccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCC
Confidence                     6677654321000000            00011111110   000              00000000  00


Q ss_pred             CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          304 GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       304 ~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .....+..+.++.+|+.+||+.||++|||+.|+++
T Consensus       362 ~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             GGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            00111223567889999999999999999999986


No 163
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00  E-value=2.8e-44  Score=332.61  Aligned_cols=249  Identities=17%  Similarity=0.256  Sum_probs=191.7

Q ss_pred             ccCCCCCeecccCceEEEEEEeCCceEEEEEEccCC--CchhHHHHHHHHHHHHhcC--CCceeeeeeeeeeCCccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMS--HNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ..|...+.||+|+||.||+|...++..+++|.+...  .....+.+.+|+.++.+++  ||||+++++++..++.+++||
T Consensus        56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~  135 (390)
T 2zmd_A           56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM  135 (390)
T ss_dssp             EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred             CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence            458999999999999999999954555555544332  2344577999999999996  599999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      | +.+++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++ ++.+||+|||+++...
T Consensus       136 E-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~  205 (390)
T 2zmd_A          136 E-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQ  205 (390)
T ss_dssp             E-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC-
T ss_pred             e-cCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEE-CCeEEEEecCcccccc
Confidence            9 5668999999874     57899999999999999999999   99999999999999995 5899999999998765


Q ss_pred             CCCce-eeccccccCCccccccccc-----------CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHH
Q 045067          218 EGETY-IDDGVKGTSGIVAPEYART-----------GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFV  285 (347)
Q Consensus       218 ~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  285 (347)
                      ..... ......||+.|+|||++.+           ..++.++|||||||++|||+ +|++||.....       .....
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell-~G~~Pf~~~~~-------~~~~~  277 (390)
T 2zmd_A          206 PDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT-YGKTPFQQIIN-------QISKL  277 (390)
T ss_dssp             --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH-HSSCTTTTCCC-------HHHHH
T ss_pred             CCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH-HCCCcchhhhH-------HHHHH
Confidence            43322 2345679999999998865           46889999999999999999 99999964221       11222


Q ss_pred             HHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ...........  .+.        ..+..+.+++.+||+.||++|||+.|+++
T Consensus       278 ~~~~~~~~~~~--~~~--------~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          278 HAIIDPNHEIE--FPD--------IPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHHCTTSCCC--CCC--------CSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhCccccCC--CCc--------cchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            22222111000  010        11346789999999999999999999985


No 164
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00  E-value=9.8e-45  Score=332.36  Aligned_cols=198  Identities=18%  Similarity=0.254  Sum_probs=171.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .++|...+.||+|+||+||+|.+ .++..+++|+.... .....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus        32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e  111 (360)
T 3eqc_A           32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME  111 (360)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence            35788899999999999999999 45565666655443 34445779999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR-PIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      |+++++|.+++...     ..+++..+..++.+++.||.|||   +. +|+||||||+||+++.++.+||+|||++....
T Consensus       112 ~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  183 (360)
T 3eqc_A          112 HMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLR---EKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLI  183 (360)
T ss_dssp             CCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHH
T ss_pred             CCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HhCCEEcCCccHHHEEECCCCCEEEEECCCCcccc
Confidence            99999999999875     67999999999999999999999   75 99999999999999999999999999986543


Q ss_pred             CCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCcccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNM  270 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~  270 (347)
                      ..   ......||+.|+|||++.+..++.++|||||||++|+|+ +|+.||..
T Consensus       184 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~  232 (360)
T 3eqc_A          184 DS---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMA-VGRYPIPP  232 (360)
T ss_dssp             HH---C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHH-HTSCCSSC
T ss_pred             cc---cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHH-hCCCCCCC
Confidence            21   123457899999999999999999999999999999999 99999964


No 165
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00  E-value=1.4e-44  Score=321.55  Aligned_cols=246  Identities=19%  Similarity=0.235  Sum_probs=193.3

Q ss_pred             cCCCCCeecccCceEEEEEEe-CCceEEEEEEccC-C-CchhHHHHHHHHHHHHhcCCCceeeeeeeeee----CCccEE
Q 045067           63 NYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDG-S-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE----VEIPVL  135 (347)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~-~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l  135 (347)
                      .|...+.||+|+||+||+|.. .++..+++|.... . .....+.+.+|+.++++++||||+++++++..    ....++
T Consensus        27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  106 (290)
T 1t4h_A           27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL  106 (290)
T ss_dssp             EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred             eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence            356677899999999999999 4554444444332 2 23445778999999999999999999999875    356899


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCCeEEC-CCCceEEecCCC
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP--IVFRDLKSSYILVS-ERYVPKLFNFSL  212 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlkp~Nill~-~~~~~kl~Dfg~  212 (347)
                      ||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+  |+||||||+||+++ .++.+||+|||+
T Consensus       107 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~  178 (290)
T 1t4h_A          107 VTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLH---TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGL  178 (290)
T ss_dssp             EEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TSSSCCCCSCCCGGGEEESSTTSCEEECCTTG
T ss_pred             EEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHH---cCCCCEEECCCCHHHEEEECCCCCEEEeeCCC
Confidence            99999999999999875     67999999999999999999999   888  99999999999998 789999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      +........   ....||+.|+|||.+.+ .++.++||||+|+++|+|+ +|+.||.....       ........ ..+
T Consensus       179 ~~~~~~~~~---~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~-------~~~~~~~~-~~~  245 (290)
T 1t4h_A          179 ATLKRASFA---KAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMA-TSEYPYSECQN-------AAQIYRRV-TSG  245 (290)
T ss_dssp             GGGCCTTSB---EESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHH-HSSCTTTTCSS-------HHHHHHHH-TTT
T ss_pred             ccccccccc---ccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHH-hCCCCCCCcCc-------HHHHHHHH-hcc
Confidence            976543322   34568999999998764 5899999999999999999 89999964321       12222221 111


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ....         ......++.+.+++.+||+.||++|||+.|+++
T Consensus       246 ~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          246 VKPA---------SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             CCCG---------GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCcc---------ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            1111         111122346889999999999999999999986


No 166
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00  E-value=2.2e-45  Score=338.74  Aligned_cols=250  Identities=12%  Similarity=0.115  Sum_probs=187.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccC--CCchhHHHHHHHH---HHHHhcCCCceeeee-------ee
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDG--SVFDAYDCCFNNI---VFASQMSHNNVLRLI-------GC  126 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~--~~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~  126 (347)
                      .++|...+.||+|+||+||+|.. .++ .+|+|.+...  ......+.+.+|+   .++++++||||++++       ++
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~  151 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  151 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence            46688889999999999999998 444 4555544322  2233457789999   455566899999998       55


Q ss_pred             eeeCC-----------------ccEEEEEeCCCCCHHHHHhhhccC--CCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 045067          127 CLEVE-----------------IPVLVFESAEYGNLHDLLKRSYQS--HSEPLLLKHRLKIAMEIANVFAYLHIGFSRPI  187 (347)
Q Consensus       127 ~~~~~-----------------~~~lv~e~~~~g~L~~~l~~~~~~--~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i  187 (347)
                      +.+.+                 ..++||||+ +|+|.+++......  ....+++..+..++.|++.||+|||   +.+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i  227 (377)
T 3byv_A          152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL  227 (377)
T ss_dssp             EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence            55443                 378999999 57999999864111  1123445888899999999999999   9999


Q ss_pred             EeccCCCCCeEECCCCceEEecCCCCccCCCCCceeeccccccCCcccccccccC-----------CCCCccchHHHHHH
Q 045067          188 VFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTG-----------YLNEKCDVYSFGLL  256 (347)
Q Consensus       188 vH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~G~~  256 (347)
                      +||||||+|||++.++.+||+|||+++....    ......| +.|+|||++.+.           .++.++|||||||+
T Consensus       228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~i  302 (377)
T 3byv_A          228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV  302 (377)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHH
T ss_pred             ecCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHH
Confidence            9999999999999999999999999986432    2234567 999999998877           89999999999999


Q ss_pred             HHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHH
Q 045067          257 LLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDV  336 (347)
Q Consensus       257 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~el  336 (347)
                      +|||+ +|+.||.......                 ....+... .      ...++.+.+++.+||+.||++|||+.|+
T Consensus       303 l~ell-tg~~Pf~~~~~~~-----------------~~~~~~~~-~------~~~~~~~~~li~~~L~~dp~~Rpt~~e~  357 (377)
T 3byv_A          303 IYWIW-CADLPITKDAALG-----------------GSEWIFRS-C------KNIPQPVRALLEGFLRYPKEDRLLPLQA  357 (377)
T ss_dssp             HHHHH-HSSCCC------C-----------------CSGGGGSS-C------CCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred             HHHHH-HCCCCCccccccc-----------------chhhhhhh-c------cCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence            99999 8999996432210                 00111110 0      1224568899999999999999999999


Q ss_pred             HH--HHHHHH
Q 045067          337 AK--QIKKMY  344 (347)
Q Consensus       337 l~--~L~~i~  344 (347)
                      ++  .++++.
T Consensus       358 l~hp~f~~~~  367 (377)
T 3byv_A          358 METPEYEQLR  367 (377)
T ss_dssp             HTSHHHHHHH
T ss_pred             hhChHHHHHH
Confidence            86  555554


No 167
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00  E-value=4.8e-45  Score=333.47  Aligned_cols=264  Identities=14%  Similarity=0.144  Sum_probs=203.0

Q ss_pred             hccCCCCCeecccCceEEEEEEeC---------CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceee---------
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLP---------DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLR---------  122 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~---------~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~---------  122 (347)
                      .++|...+.||+|+||.||+|...         .+..+++|.....     +.+.+|+.++++++||||++         
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~  115 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP  115 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence            367999999999999999999983         2455555555433     45889999999999999987         


Q ss_pred             ------eeeeeee-CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 045067          123 ------LIGCCLE-VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSS  195 (347)
Q Consensus       123 ------l~~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~  195 (347)
                            +++++.. +...++||||+ +++|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+
T Consensus       116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~  188 (352)
T 2jii_A          116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAE  188 (352)
T ss_dssp             TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGG
T ss_pred             ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHH
Confidence                  5667666 67889999999 89999999863   2357999999999999999999999   999999999999


Q ss_pred             CeEECCCC--ceEEecCCCCccCCCCCce------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCc
Q 045067          196 YILVSERY--VPKLFNFSLSASIPEGETY------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDL  267 (347)
Q Consensus       196 Nill~~~~--~~kl~Dfg~a~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p  267 (347)
                      |||++.++  .+||+|||+++........      ......||+.|+|||.+.+..++.++|||||||++|+|+ +|+.|
T Consensus       189 NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~p  267 (352)
T 2jii_A          189 NIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWL-YGFLP  267 (352)
T ss_dssp             GEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSCCT
T ss_pred             HEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHH-hCCCC
Confidence            99999998  9999999999776532211      113357999999999999999999999999999999999 89999


Q ss_pred             cccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          268 FNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      |.....   ..............  ....+.+.....    ...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       268 f~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~  337 (352)
T 2jii_A          268 WTNCLP---NTEDIMKQKQKFVD--KPGPFVGPCGHW----IRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQD  337 (352)
T ss_dssp             TGGGTT---CHHHHHHHHHHHHH--SCCCEECTTSCE----ECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             cccCCc---CHHHHHHHHHhccC--Chhhhhhhcccc----CCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHh
Confidence            975431   11111111111111  111111111100    11245688999999999999999999999999999765


No 168
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00  E-value=1.1e-44  Score=354.07  Aligned_cols=251  Identities=22%  Similarity=0.309  Sum_probs=196.6

Q ss_pred             CeecccCceEEEEEEe---CCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeCCC
Q 045067           68 NIITESSIFRLCQGVL---PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAEY  142 (347)
Q Consensus        68 ~~lg~G~~g~Vy~~~~---~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  142 (347)
                      +.||+|+||.||+|.+   ..+..+++|++....  ....+.+.+|+.++.+++||||+++++++.+ +..++||||+++
T Consensus       375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~  453 (635)
T 4fl3_A          375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL  453 (635)
T ss_dssp             EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence            4799999999999976   334445555544322  2335779999999999999999999999864 568899999999


Q ss_pred             CCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCCce
Q 045067          143 GNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY  222 (347)
Q Consensus       143 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  222 (347)
                      |+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++........
T Consensus       454 g~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~  525 (635)
T 4fl3_A          454 GPLNKYLQQN-----RHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY  525 (635)
T ss_dssp             EEHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred             CCHHHHHhhC-----CCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence            9999999764     67999999999999999999999   999999999999999999999999999999876544321


Q ss_pred             --eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCC
Q 045067          223 --IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDP  300 (347)
Q Consensus       223 --~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (347)
                        ......+|+.|+|||++.+..++.++|||||||++|||++.|+.||.....        .. +......+....    
T Consensus       526 ~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--------~~-~~~~i~~~~~~~----  592 (635)
T 4fl3_A          526 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--------SE-VTAMLEKGERMG----  592 (635)
T ss_dssp             ---------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--------HH-HHHHHHTTCCCC----
T ss_pred             cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--------HH-HHHHHHcCCCCC----
Confidence              123345788999999999999999999999999999999449999964322        11 222222221110    


Q ss_pred             ccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          301 RIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       301 ~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                            .+...+.++.+++.+||+.||++|||+.+|++.|+++..+
T Consensus       593 ------~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~  632 (635)
T 4fl3_A          593 ------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD  632 (635)
T ss_dssp             ------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred             ------CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence                  0112345788999999999999999999999999998764


No 169
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00  E-value=2.8e-44  Score=321.55  Aligned_cols=249  Identities=22%  Similarity=0.278  Sum_probs=201.7

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .+.|...+.||+|+||.||+|.. .++..+++|+.. .......+.+.+|+.++++++||||+++++++.++...++|||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  100 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME  100 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence            35688889999999999999998 445555555444 3334455789999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++++|.+++..      ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus       101 ~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~  171 (303)
T 3a7i_A          101 YLGGGSALDLLEP------GPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTD  171 (303)
T ss_dssp             CCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBT
T ss_pred             eCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCc
Confidence            9999999999965      57999999999999999999999   99999999999999999999999999999977644


Q ss_pred             CCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccccc
Q 045067          219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIV  298 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      ... ......||+.|+|||.+.+..++.++||||||+++|+|+ +|..||.....        ....... .....    
T Consensus       172 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~--------~~~~~~~-~~~~~----  236 (303)
T 3a7i_A          172 TQI-KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELA-RGEPPHSELHP--------MKVLFLI-PKNNP----  236 (303)
T ss_dssp             TBC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCTTTTSCH--------HHHHHHH-HHSCC----
T ss_pred             ccc-ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHc-cCCCCCCCcCH--------HHHHHHh-hcCCC----
Confidence            321 223457899999999999999999999999999999999 89999864321        1111111 11111    


Q ss_pred             CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          299 DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                       +...     ...+..+.+++.+||+.||++|||+.++++.
T Consensus       237 -~~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          237 -PTLE-----GNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             -CCCC-----SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             -CCCc-----cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence             1111     1123467899999999999999999999874


No 170
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00  E-value=1.8e-44  Score=353.93  Aligned_cols=264  Identities=19%  Similarity=0.268  Sum_probs=205.4

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEe-C---CceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVL-P---DRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV  130 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~---~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  130 (347)
                      +.....++|...+.||+|+||.||+|.+ .   .+..+++|... .......+.+.+|+.++++++||||+++++++. +
T Consensus       384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~  462 (656)
T 2j0j_A          384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E  462 (656)
T ss_dssp             GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred             ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence            3344457788889999999999999998 2   22344445444 334444577999999999999999999999985 4


Q ss_pred             CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecC
Q 045067          131 EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF  210 (347)
Q Consensus       131 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  210 (347)
                      +..++||||+++|+|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus       463 ~~~~lv~E~~~~g~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DF  535 (656)
T 2j0j_A          463 NPVWIIMELCTLGELRSFLQVR----KFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDF  535 (656)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHT----TTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCC
T ss_pred             CceEEEEEcCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEec
Confidence            6789999999999999999763    256899999999999999999999   999999999999999999999999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      |+++..............+|+.|+|||.+.+..++.++|||||||++|||++.|.+||.....        .........
T Consensus       536 G~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--------~~~~~~i~~  607 (656)
T 2j0j_A          536 GLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--------NDVIGRIEN  607 (656)
T ss_dssp             CCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHH
T ss_pred             CCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--------HHHHHHHHc
Confidence            999877554433334456788999999999899999999999999999999559999964321        122222222


Q ss_pred             ccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          291 NRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ... ..     .     +...+..+.+++.+||+.||++|||+.++++.|+++.++
T Consensus       608 ~~~-~~-----~-----~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          608 GER-LP-----M-----PPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             TCC-CC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCC-CC-----C-----CccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            111 10     0     112345688999999999999999999999999998653


No 171
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00  E-value=2.4e-45  Score=330.52  Aligned_cols=263  Identities=19%  Similarity=0.234  Sum_probs=201.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeee----CCccEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE----VEIPVL  135 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~~~l  135 (347)
                      .++|...+.||+|+||.||++.. .++..+++|.+........+.+.+|+.+++.++||||+++++++..    ....++
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l  107 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL  107 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence            46799999999999999999998 4555555554444444556789999999999999999999999873    347899


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++|+|.+++... ......+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++..
T Consensus       108 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~  183 (317)
T 2buj_A          108 LLPFFKRGTLWNEIERL-KDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQ  183 (317)
T ss_dssp             EEECCTTCBHHHHHHHH-HTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred             EEEeCCCCcHHHHHHHH-HhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence            99999999999999763 223367999999999999999999999   99999999999999999999999999999876


Q ss_pred             CCCCCcee--------eccccccCCcccccccccCC---CCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHH
Q 045067          216 IPEGETYI--------DDGVKGTSGIVAPEYARTGY---LNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDF  284 (347)
Q Consensus       216 ~~~~~~~~--------~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  284 (347)
                      ........        .....||+.|+|||.+.+..   ++.++||||||+++|+|+ +|+.||......  ... ..  
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~~--~~~-~~--  257 (317)
T 2buj_A          184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMM-FGEGPYDMVFQK--GDS-VA--  257 (317)
T ss_dssp             SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHH-HSSCTTHHHHHT--TSC-HH--
T ss_pred             cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHH-hCCCChhhhhcc--cch-hh--
Confidence            54211100        12245799999999887553   689999999999999999 999998642210  000 00  


Q ss_pred             HHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          285 VKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                        ...... .. .  +   .   ....+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       258 --~~~~~~-~~-~--~---~---~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~  306 (317)
T 2buj_A          258 --LAVQNQ-LS-I--P---Q---SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP  306 (317)
T ss_dssp             --HHHHCC----C--C---C---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred             --HHhhcc-CC-C--C---c---cccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence              111110 00 0  0   0   01224568899999999999999999999999998754


No 172
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00  E-value=8.1e-45  Score=348.16  Aligned_cols=253  Identities=19%  Similarity=0.241  Sum_probs=202.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|.+...   .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus       183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV  262 (576)
T 2acx_A          183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV  262 (576)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence            46788999999999999999999 45555555544322   112335688999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||++||+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||++...
T Consensus       263 mEy~~gg~L~~~l~~~---~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~  336 (576)
T 2acx_A          263 LTLMNGGDLKFHIYHM---GQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHV  336 (576)
T ss_dssp             ECCCCSCBHHHHHHSS---SSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred             EEcCCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceec
Confidence            9999999999999764   2245999999999999999999999   999999999999999999999999999999877


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      .....  .....||+.|+|||++.+..++.++|||||||++|||+ +|++||.....    .. ....+.........  
T Consensus       337 ~~~~~--~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLl-tG~~PF~~~~~----~~-~~~~i~~~i~~~~~--  406 (576)
T 2acx_A          337 PEGQT--IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI-AGQSPFQQRKK----KI-KREEVERLVKEVPE--  406 (576)
T ss_dssp             CTTCC--EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHH-HSSCSSSCSSS----CC-CHHHHHHHHHHCCC--
T ss_pred             ccCcc--ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHH-hCCCCCccccc----ch-hHHHHHHHhhcccc--
Confidence            54432  23458999999999999999999999999999999999 89999975322    11 11112222221110  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-----TMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-----s~~ell~  338 (347)
                          ..     ....+.++.+++.+||+.||.+||     ++.|+++
T Consensus       407 ----~~-----p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          407 ----EY-----SERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             ----CC-----CTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             ----cC-----CccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence                00     112345688999999999999999     7788864


No 173
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00  E-value=4.6e-44  Score=338.08  Aligned_cols=256  Identities=20%  Similarity=0.207  Sum_probs=191.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC------
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE------  131 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  131 (347)
                      .++|...+.||+|+||+||+|.. . +..+|+|++.... .....+.+.+|+.+++.++||||+++++++....      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  140 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ  140 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence            56788999999999999999998 4 4455555554332 2334567889999999999999999999987653      


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                      .+++||||+++ +|.+.+.       ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       141 ~~~lv~E~~~~-~l~~~~~-------~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG  209 (464)
T 3ttj_A          141 DVYLVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  209 (464)
T ss_dssp             EEEEEEECCSE-EHHHHHT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred             eEEEEEeCCCC-CHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEE
Confidence            56999999986 6777774       34899999999999999999999   9999999999999999999999999999


Q ss_pred             CCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh-
Q 045067          212 LSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE-  290 (347)
Q Consensus       212 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-  290 (347)
                      +++......  ......||+.|+|||++.+..++.++||||+||++|||+ +|++||.....        ......... 
T Consensus       210 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-~g~~pF~g~~~--------~~~~~~i~~~  278 (464)
T 3ttj_A          210 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV-RHKILFPGRDY--------IDQWNKVIEQ  278 (464)
T ss_dssp             CC-----CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHH
T ss_pred             eeeecCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHHh
Confidence            998765432  234568999999999999999999999999999999999 99999965321        111111111 


Q ss_pred             ---------------------ccC-cc-----cccCCcc-C-CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 ---------------------NRG-FN-----GIVDPRI-I-GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ---------------------~~~-~~-----~~~~~~~-~-~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                                           ... ..     ..+.... . ..........++.+|+.+||+.||++|||+.|+++
T Consensus       279 lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          279 LGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence                                 000 00     0000000 0 01112223567899999999999999999999986


No 174
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00  E-value=2.9e-44  Score=342.61  Aligned_cols=251  Identities=20%  Similarity=0.250  Sum_probs=196.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ..+.|...+.||+|+||+||+|.. .++..+++|++....  ....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus        35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  114 (494)
T 3lij_A           35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV  114 (494)
T ss_dssp             HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            455789999999999999999999 455545555444322  22346789999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC---CceEEecCCCC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER---YVPKLFNFSLS  213 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfg~a  213 (347)
                      |||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++..   +.+||+|||++
T Consensus       115 ~e~~~~g~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a  186 (494)
T 3lij_A          115 MECYKGGELFDEIIHR-----MKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLS  186 (494)
T ss_dssp             EECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred             EecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCC
Confidence            9999999999998775     67999999999999999999999   9999999999999999764   55999999999


Q ss_pred             ccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      ........  .....||+.|+|||++. ..++.++||||+||++|+|+ +|.+||.....        .......... .
T Consensus       187 ~~~~~~~~--~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~--------~~~~~~i~~~-~  253 (494)
T 3lij_A          187 AVFENQKK--MKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILL-AGYPPFGGQTD--------QEILRKVEKG-K  253 (494)
T ss_dssp             EECBTTBC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHT-C
T ss_pred             eECCCCcc--ccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHhC-C
Confidence            77654322  24467999999999876 46899999999999999999 99999964321        2222222222 1


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .. ..      .......++.+.+++.+||+.+|.+|||+.|+++
T Consensus       254 ~~-~~------~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          254 YT-FD------SPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             CC-CC------SGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CC-CC------chhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            11 00      0111223456889999999999999999999985


No 175
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00  E-value=4.5e-44  Score=342.16  Aligned_cols=252  Identities=22%  Similarity=0.232  Sum_probs=199.5

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC-c------------hhHHHHHHHHHHHHhcCCCceeeee
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV-F------------DAYDCCFNNIVFASQMSHNNVLRLI  124 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~-~------------~~~~~~~~E~~~l~~l~h~niv~l~  124 (347)
                      ...+.|...+.||+|+||+||+|.. .++..+++|++.... .            ...+.+.+|+.++++++||||++++
T Consensus        33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~  112 (504)
T 3q5i_A           33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF  112 (504)
T ss_dssp             CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred             CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence            3567899999999999999999999 455555555443321 1            2346789999999999999999999


Q ss_pred             eeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC-
Q 045067          125 GCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY-  203 (347)
Q Consensus       125 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~-  203 (347)
                      +++.++...++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++ 
T Consensus       113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~  184 (504)
T 3q5i_A          113 DVFEDKKYFYLVTEFYEGGELFEQIINR-----HKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNS  184 (504)
T ss_dssp             EEEECSSEEEEEEECCTTCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTC
T ss_pred             EEEEcCCEEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCC
Confidence            9999999999999999999999999775     67999999999999999999999   99999999999999999776 


Q ss_pred             --ceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchH
Q 045067          204 --VPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFE  281 (347)
Q Consensus       204 --~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~  281 (347)
                        .+||+|||++........  .....||+.|+|||++. ..++.++||||+||++|+|+ +|.+||.....        
T Consensus       185 ~~~~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~--------  252 (504)
T 3q5i_A          185 LLNIKIVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILL-CGYPPFGGQND--------  252 (504)
T ss_dssp             CSSEEECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------
T ss_pred             CccEEEEECCCCEEcCCCCc--cccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHH-hCCCCCCCCCH--------
Confidence              699999999987654322  24467999999999877 46899999999999999999 89999964321        


Q ss_pred             HHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          282 MDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .......... ....       ........+.++.+++.+||+.||.+|||+.|+++
T Consensus       253 ~~~~~~i~~~-~~~~-------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          253 QDIIKKVEKG-KYYF-------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHHHHHHC-CCCC-------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHcC-CCCC-------CccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            2222222221 1100       00111223567889999999999999999999985


No 176
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00  E-value=7.2e-44  Score=327.17  Aligned_cols=255  Identities=20%  Similarity=0.296  Sum_probs=202.0

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--------chhHHHHHHHHHHHHhc-CCCceeeeeee
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--------FDAYDCCFNNIVFASQM-SHNNVLRLIGC  126 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~  126 (347)
                      .....++|...+.||+|+||.||+|.. .++..+++|+.....        ....+.+.+|+.++.++ +||||++++++
T Consensus        89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~  168 (365)
T 2y7j_A           89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS  168 (365)
T ss_dssp             HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred             hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence            345567899999999999999999998 455555555544322        11235678999999999 79999999999


Q ss_pred             eeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceE
Q 045067          127 CLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPK  206 (347)
Q Consensus       127 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~k  206 (347)
                      +...+..++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.||+||||||+||+++.++.+|
T Consensus       169 ~~~~~~~~lv~e~~~g~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ik  240 (365)
T 2y7j_A          169 YESSSFMFLVFDLMRKGELFDYLTEK-----VALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIR  240 (365)
T ss_dssp             EEBSSEEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEE
T ss_pred             EeeCCEEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEE
Confidence            99999999999999999999999865     67999999999999999999999   99999999999999999999999


Q ss_pred             EecCCCCccCCCCCceeeccccccCCccccccccc------CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCch
Q 045067          207 LFNFSLSASIPEGETYIDDGVKGTSGIVAPEYART------GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESF  280 (347)
Q Consensus       207 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~  280 (347)
                      |+|||++........  .....||+.|+|||++.+      ..++.++|||||||++|+|+ +|..||.....       
T Consensus       241 l~DfG~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell-~g~~pf~~~~~-------  310 (365)
T 2y7j_A          241 LSDFGFSCHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL-AGSPPFWHRRQ-------  310 (365)
T ss_dssp             ECCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHH-HSSCSSCCSSH-------
T ss_pred             EEecCcccccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHH-HCCCCCCCCCH-------
Confidence            999999987654332  234679999999998863      35889999999999999999 89999964221       


Q ss_pred             HHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          281 EMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       ......... +... .      ........+..+.+++.+||+.||++|||+.|+++
T Consensus       311 -~~~~~~i~~-~~~~-~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          311 -ILMLRMIME-GQYQ-F------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             -HHHHHHHHH-TCCC-C------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -HHHHHHHHh-CCCC-C------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             112222211 1110 0      00011122456889999999999999999999986


No 177
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00  E-value=1.9e-44  Score=321.19  Aligned_cols=248  Identities=19%  Similarity=0.227  Sum_probs=202.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|+....   .....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   93 (294)
T 2rku_A           14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV   93 (294)
T ss_dssp             TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence            46788899999999999999999 55666666655432   233456789999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++...
T Consensus        94 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~  165 (294)
T 2rku_A           94 LELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKV  165 (294)
T ss_dssp             EECCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceec
Confidence            9999999999999875     67999999999999999999999   999999999999999999999999999999876


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ..... ......||+.|+|||.+.+..++.++||||+|+++|+|+ +|+.||.....        .......... ..  
T Consensus       166 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~--------~~~~~~~~~~-~~--  232 (294)
T 2rku_A          166 EYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCL--------KETYLRIKKN-EY--  232 (294)
T ss_dssp             CSTTC-CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHH-HSSCTTCCSSH--------HHHHHHHHTT-CC--
T ss_pred             ccCcc-ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHhhc-cC--
Confidence            53322 223457899999999999888999999999999999999 89999964321        1111111111 10  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                          ...     ...+..+.+++.+||+.||++|||+.|+++
T Consensus       233 ----~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          233 ----SIP-----KHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             ----CCC-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ----CCc-----cccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence                000     112346789999999999999999999986


No 178
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00  E-value=3e-44  Score=341.90  Aligned_cols=251  Identities=20%  Similarity=0.241  Sum_probs=199.2

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      ..+.|...+.||+|+||+||+|.. .++..+++|++...  .....+.+.+|+.++++++||||+++++++.+....++|
T Consensus        20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv   99 (486)
T 3mwu_A           20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (486)
T ss_dssp             HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence            456799999999999999999999 44554555544321  122346789999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC---CCCceEEecCCCC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS---ERYVPKLFNFSLS  213 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~a  213 (347)
                      |||+++|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++   .++.+||+|||++
T Consensus       100 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a  171 (486)
T 3mwu_A          100 GELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLS  171 (486)
T ss_dssp             ECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCT
T ss_pred             EEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcC
Confidence            9999999999999775     67999999999999999999999   99999999999999995   4567999999999


Q ss_pred             ccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      +.......  .....||+.|+|||++.+ .++.++||||+||++|+|+ +|.+||.....        .......... .
T Consensus       172 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll-~g~~pf~~~~~--------~~~~~~i~~~-~  238 (486)
T 3mwu_A          172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILL-SGTPPFYGKNE--------YDILKRVETG-K  238 (486)
T ss_dssp             TTBCCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHT-C
T ss_pred             eECCCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHhC-C
Confidence            76654322  234679999999999876 5899999999999999999 99999964321        2222222221 1


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ...       ........+..+.+++.+||+.||++|||+.|+++
T Consensus       239 ~~~-------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          239 YAF-------DLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             CCS-------CSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCC-------CCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            110       00111233557889999999999999999999987


No 179
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.3e-44  Score=328.86  Aligned_cols=253  Identities=19%  Similarity=0.225  Sum_probs=191.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC------
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE------  131 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  131 (347)
                      .+.|...+.||+|+||.||+|.. . +..+|+|++.... .....+.+.+|+.++++++||||+++++++....      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~  103 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT  103 (367)
T ss_dssp             BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred             cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence            46788999999999999999998 4 4555555554332 2334567899999999999999999999988653      


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                      ..++||||+ +++|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg  173 (367)
T 1cm8_A          104 DFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG  173 (367)
T ss_dssp             CCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCT
T ss_pred             eEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeee
Confidence            459999999 6799999976      56999999999999999999999   9999999999999999999999999999


Q ss_pred             CCccCCCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          212 LSASIPEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       212 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      +++.....    .....+|+.|+|||++.+ ..++.++||||+||++|||+ +|++||.....        .........
T Consensus       174 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~--------~~~l~~i~~  240 (367)
T 1cm8_A          174 LARQADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI-TGKTLFKGSDH--------LDQLKEIMK  240 (367)
T ss_dssp             TCEECCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHH
T ss_pred             cccccccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHH
Confidence            99875432    234678999999998877 68999999999999999999 99999974321        111111111


Q ss_pred             c-cC--------------------cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 N-RG--------------------FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ~-~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . +.                    .........  .......++.+.+|+.+||+.||++|||+.|+++
T Consensus       241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          241 VTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDF--ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             HHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCG--GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCH--HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            0 00                    000000000  0111223457889999999999999999999987


No 180
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=6.9e-45  Score=332.77  Aligned_cols=254  Identities=16%  Similarity=0.187  Sum_probs=200.2

Q ss_pred             hccCCCCCeecccCceEEEEEEe----CCceEEEEEEccCCC----chhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCC
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL----PDRTISVVKFIDGSV----FDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVE  131 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~~v~k~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~  131 (347)
                      .++|...+.||+|+||.||+|..    .++..+++|++....    ....+.+.+|+.++.++ +||||+++++++.+.+
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~  132 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  132 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence            36899999999999999999998    245555555544321    22335678899999999 6999999999999999


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                      ..++||||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       133 ~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG  204 (355)
T 1vzo_A          133 KLHLILDYINGGELFTHLSQR-----ERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFG  204 (355)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred             eEEEEeecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCC
Confidence            999999999999999999875     67999999999999999999999   9999999999999999999999999999


Q ss_pred             CCccCCCCCceeeccccccCCccccccccc--CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          212 LSASIPEGETYIDDGVKGTSGIVAPEYART--GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       212 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      +++..............||+.|+|||++.+  ..++.++|||||||++|||+ +|+.||.....    ............
T Consensus       205 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell-~g~~pf~~~~~----~~~~~~~~~~~~  279 (355)
T 1vzo_A          205 LSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELL-TGASPFTVDGE----KNSQAEISRRIL  279 (355)
T ss_dssp             EEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHH-HSSCTTSCTTS----CCCHHHHHHHHH
T ss_pred             CCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHH-HCCCCCccCCc----cchHHHHHHHHh
Confidence            998765443333345679999999998875  35789999999999999999 89999964322    111222222222


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCC-----CHHHHHHH
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRP-----TMIDVAKQ  339 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RP-----s~~ell~~  339 (347)
                      ...       +..     ....+..+.+++.+||+.||.+||     |+.|+++.
T Consensus       280 ~~~-------~~~-----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          280 KSE-------PPY-----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HCC-------CCC-----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             ccC-------CCC-----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            211       011     112245678999999999999999     89998764


No 181
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00  E-value=3e-44  Score=318.35  Aligned_cols=246  Identities=18%  Similarity=0.229  Sum_probs=200.4

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|......   ....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   92 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM   92 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence            36788999999999999999999 455555555543221   12236788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++|+|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++...
T Consensus        93 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A           93 LEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHA  164 (284)
T ss_dssp             ECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccC
Confidence            9999999999999875     57999999999999999999999   999999999999999999999999999998765


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                      ....   .....|++.|+|||.+.+..++.++||||||+++|+|+ +|..||.....        ......... ...  
T Consensus       165 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~--------~~~~~~~~~-~~~--  229 (284)
T 2vgo_A          165 PSLR---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFL-VGMPPFDSPSH--------TETHRRIVN-VDL--  229 (284)
T ss_dssp             SSSC---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHH-HSSCTTCCSSH--------HHHHHHHHT-TCC--
T ss_pred             cccc---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHH-HCCCCCCCCCH--------hHHHHHHhc-ccc--
Confidence            4322   23457899999999999999999999999999999999 89999964321        111222211 110  


Q ss_pred             ccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 IVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                          ...     ...+..+.+++.+||+.||.+|||+.++++
T Consensus       230 ----~~~-----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          230 ----KFP-----PFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             ----CCC-----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             ----CCC-----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence                010     112446789999999999999999999986


No 182
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00  E-value=8.6e-45  Score=329.03  Aligned_cols=264  Identities=23%  Similarity=0.311  Sum_probs=195.6

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCCCc-hhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGSVF-DAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .++|...+.||+|+||.||+|.. . +..+++|++...... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  103 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF  103 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence            35688889999999999999999 4 445555555443332 23456789999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++....
T Consensus       104 e~~~~~~l~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~  175 (331)
T 4aaa_A          104 EFVDHTILDDLELFP-----NGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLA  175 (331)
T ss_dssp             ECCSEEHHHHHHHST-----TCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----
T ss_pred             ecCCcchHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeec
Confidence            999998898887653     57999999999999999999999   9999999999999999999999999999997654


Q ss_pred             CCCceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHH----------H
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFV----------K  286 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~----------~  286 (347)
                      .... ......||+.|+|||.+.+. .++.++||||+||++|+|+ +|++||......    .......          .
T Consensus       176 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~  249 (331)
T 4aaa_A          176 APGE-VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF-MGEPLFPGDSDI----DQLYHIMMCLGNLIPRHQ  249 (331)
T ss_dssp             ---------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHH-HSSCSCCCSSHH----HHHHHHHHHHCSCCHHHH
T ss_pred             CCcc-ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHH-hCCCCCCCCCcH----HHHHHHHHHhCCCChhhh
Confidence            4322 22345789999999988775 7899999999999999999 899999653220    0000000          0


Q ss_pred             HHH-hccCcccccCCccCCch----hhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          287 KYI-ENRGFNGIVDPRIIGDE----LLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       287 ~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..+ ..........+......    ..+..+..+.+++.+||+.||++|||+.|+++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          250 ELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             hHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            000 11111111111111111    11123567899999999999999999999885


No 183
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00  E-value=2.5e-44  Score=343.78  Aligned_cols=250  Identities=14%  Similarity=0.188  Sum_probs=199.3

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ++|...++||+|+||.||+|.. .++..+++|.+....   ....+.+.+|+.++++++||||+++++++.+.+.+++||
T Consensus       185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm  264 (543)
T 3c4z_A          185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM  264 (543)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence            6788889999999999999999 455555555544321   123467889999999999999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||++||+|.+++... ......+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+++...
T Consensus       265 E~~~gg~L~~~l~~~-~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~  340 (543)
T 3c4z_A          265 TIMNGGDIRYHIYNV-DEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK  340 (543)
T ss_dssp             CCCTTCBHHHHHHTS-STTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred             EeccCCCHHHHHHHh-hcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence            999999999999763 112356999999999999999999999   9999999999999999999999999999998765


Q ss_pred             CCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccc
Q 045067          218 EGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGI  297 (347)
Q Consensus       218 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (347)
                      ..... ....+||+.|+|||++.+..++.++|||||||++|||+ +|++||.....    ................    
T Consensus       341 ~~~~~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyell-tG~~PF~~~~~----~~~~~~~~~~i~~~~~----  410 (543)
T 3c4z_A          341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI-AARGPFRARGE----KVENKELKQRVLEQAV----  410 (543)
T ss_dssp             TTCCC-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHH-HSSCSSCCTTC----CCCHHHHHHHHHHCCC----
T ss_pred             CCCcc-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHH-hCCCCCCCCcc----chhHHHHHHHHhhccc----
Confidence            44322 23458999999999999999999999999999999999 89999975321    1111222222222110    


Q ss_pred             cCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCH
Q 045067          298 VDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTM  333 (347)
Q Consensus       298 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~  333 (347)
                         ..     +...+..+.+++.+||+.||++||++
T Consensus       411 ---~~-----p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          411 ---TY-----PDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             ---CC-----CTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             ---CC-----CcccCHHHHHHHHHhccCCHhHCCCC
Confidence               00     11234567899999999999999975


No 184
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00  E-value=1.8e-44  Score=326.26  Aligned_cols=264  Identities=19%  Similarity=0.275  Sum_probs=202.2

Q ss_pred             HhccCCCCCeecccCceEEEEEEe------CCc-eEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL------PDR-TISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~-~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      ..++|...+.||+|+||.||+|.+      .++ .+++|.+...........+.+|+.++++++||||+++++++.+...
T Consensus        28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (327)
T 2yfx_A           28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP  107 (327)
T ss_dssp             CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred             ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence            346799999999999999999984      223 4555544434344455678999999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhcc--CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC---CCceEE
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQ--SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE---RYVPKL  207 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~--~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~---~~~~kl  207 (347)
                      .++||||+++++|.+++.....  .....+++..+..++.|++.||.|||   +.+|+||||||+|||++.   +..+||
T Consensus       108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl  184 (327)
T 2yfx_A          108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKI  184 (327)
T ss_dssp             CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred             cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEE
Confidence            9999999999999999987421  11245899999999999999999999   999999999999999994   456999


Q ss_pred             ecCCCCccCCCCCc-eeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          208 FNFSLSASIPEGET-YIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      +|||++........ .......+|+.|+|||.+.+..++.++||||||+++|+|++.|..||.....        .....
T Consensus       185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--------~~~~~  256 (327)
T 2yfx_A          185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--------QEVLE  256 (327)
T ss_dssp             CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--------HHHHH
T ss_pred             CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--------HHHHH
Confidence            99999875433221 1123456789999999998889999999999999999999449999964321        11222


Q ss_pred             HHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          287 KYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                       ....+....     .     ....+..+.+++.+||+.||.+|||+.++++.|+.+..
T Consensus       257 -~~~~~~~~~-----~-----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          257 -FVTSGGRMD-----P-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             -HHHTTCCCC-----C-----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -HHhcCCCCC-----C-----CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence             222211110     0     11224568899999999999999999999999998864


No 185
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00  E-value=4.5e-44  Score=326.31  Aligned_cols=264  Identities=20%  Similarity=0.201  Sum_probs=194.1

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC-----chhHHHHHHHHHHHHhcCCCceeeeeeeeeeC
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV-----FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV  130 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~  130 (347)
                      +....++|...+.||+|+||.||+|.. .++..+++|.+....     ....+.+.+|+.++++++||||+++++++.+.
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   84 (346)
T 1ua2_A            5 VKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHK   84 (346)
T ss_dssp             --------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCT
T ss_pred             hHHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeC
Confidence            344567899999999999999999999 445555555544321     11124688999999999999999999999999


Q ss_pred             CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecC
Q 045067          131 EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF  210 (347)
Q Consensus       131 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  210 (347)
                      +..++||||+++ +|.+++...    ...+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+||
T Consensus        85 ~~~~lv~e~~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Df  156 (346)
T 1ua2_A           85 SNISLVFDFMET-DLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADF  156 (346)
T ss_dssp             TCCEEEEECCSE-EHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred             CceEEEEEcCCC-CHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEec
Confidence            999999999986 899988763    356889999999999999999999   999999999999999999999999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      |+++....... ......||+.|+|||.+.+. .++.++|||||||++|+|+ +|.+||.....        ........
T Consensus       157 g~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~~~~~~~~--------~~~~~~i~  226 (346)
T 1ua2_A          157 GLAKSFGSPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL-LRVPFLPGDSD--------LDQLTRIF  226 (346)
T ss_dssp             GGGSTTTSCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHH
T ss_pred             ccceeccCCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHH-HCCCCCCCCCH--------HHHHHHHH
Confidence            99987643322 22346789999999988654 5899999999999999999 89999864321        12222222


Q ss_pred             hc-cC-----cccc---cCC----ccCC---chhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          290 EN-RG-----FNGI---VDP----RIIG---DELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       290 ~~-~~-----~~~~---~~~----~~~~---~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .. +.     +...   .+.    ....   .......+..+.+++.+||+.||++|||+.|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          227 ETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             HHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            21 10     0000   000    0000   0011223467899999999999999999999986


No 186
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00  E-value=1.8e-44  Score=338.38  Aligned_cols=198  Identities=19%  Similarity=0.207  Sum_probs=162.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCce-EEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC-----Cc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRT-ISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV-----EI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~-~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  132 (347)
                      .++|...+.||+|+||.||+|.. .++. +|+|++.... .....+.+.+|+.++++++||||+++++++...     ..
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~  104 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE  104 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence            56899999999999999999998 4444 5555554332 233456789999999999999999999999876     56


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .|+||||+. |+|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus       105 ~~lv~e~~~-~~L~~~~~~~-----~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGl  175 (432)
T 3n9x_A          105 LYIVLEIAD-SDLKKLFKTP-----IFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGL  175 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEecCC-cCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCC
Confidence            899999997 5999999764     67999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCce---------------------eeccccccCCccccccc-ccCCCCCccchHHHHHHHHHHHhcCCCcc
Q 045067          213 SASIPEGETY---------------------IDDGVKGTSGIVAPEYA-RTGYLNEKCDVYSFGLLLLQLLSTGEDLF  268 (347)
Q Consensus       213 a~~~~~~~~~---------------------~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~el~~~g~~p~  268 (347)
                      ++........                     ......||+.|+|||++ .+..++.++||||+||++|||+ +|..||
T Consensus       176 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell-~g~~p~  252 (432)
T 3n9x_A          176 ARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELL-NMLQSH  252 (432)
T ss_dssp             CEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHH-TTCTTT
T ss_pred             cccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHH-hccccc
Confidence            9876543211                     12457799999999975 5667999999999999999999 644444


No 187
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00  E-value=1.5e-43  Score=315.41  Aligned_cols=252  Identities=19%  Similarity=0.225  Sum_probs=194.0

Q ss_pred             cCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEEeCC
Q 045067           63 NYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFESAE  141 (347)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~  141 (347)
                      .|....+||+|+||.||+|.. .++..+++|..........+.+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus        23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  102 (295)
T 2clq_A           23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP  102 (295)
T ss_dssp             TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred             CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence            355556999999999999998 5555555555544444445779999999999999999999999999999999999999


Q ss_pred             CCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC-CCceEEecCCCCccCCCCC
Q 045067          142 YGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE-RYVPKLFNFSLSASIPEGE  220 (347)
Q Consensus       142 ~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~-~~~~kl~Dfg~a~~~~~~~  220 (347)
                      +++|.+++....  ....+++..+..++.|++.||.|||   +.+++||||||+||+++. ++.+||+|||++.......
T Consensus       103 ~~~L~~~l~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~  177 (295)
T 2clq_A          103 GGSLSALLRSKW--GPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN  177 (295)
T ss_dssp             EEEHHHHHHHTT--CCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--
T ss_pred             CCCHHHHHHhhc--cCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC
Confidence            999999997631  2245678999999999999999999   999999999999999987 8999999999998765432


Q ss_pred             ceeeccccccCCcccccccccC--CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccccc
Q 045067          221 TYIDDGVKGTSGIVAPEYARTG--YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIV  298 (347)
Q Consensus       221 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      . ......||+.|+|||.+.+.  .++.++||||||+++|+|+ +|+.||.....      ............ .     
T Consensus       178 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~------~~~~~~~~~~~~-~-----  243 (295)
T 2clq_A          178 P-CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMA-TGKPPFYELGE------PQAAMFKVGMFK-V-----  243 (295)
T ss_dssp             ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHH-HTSCTTGGGSS------HHHHHHHHHHHC-C-----
T ss_pred             C-cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHH-HCCCCccCCCc------hhHHHHhhcccc-c-----
Confidence            2 12345789999999988764  3789999999999999999 89999964321      111111111110 0     


Q ss_pred             CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          299 DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .+.+.     ...+.++.+++.+||+.||++|||+.++++
T Consensus       244 ~~~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          244 HPEIP-----ESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             CCCCC-----TTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             ccccc-----ccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            11111     122456789999999999999999999975


No 188
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00  E-value=4.8e-44  Score=324.69  Aligned_cols=249  Identities=18%  Similarity=0.228  Sum_probs=203.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ..++|...+.||+|+||.||++.. .++..+++|+....   .....+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  118 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV  118 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence            346788999999999999999999 55666666655432   23345778999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||++..
T Consensus       119 v~e~~~~~~L~~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~  190 (335)
T 2owb_A          119 VLELCRRRSLLELHKRR-----KALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK  190 (335)
T ss_dssp             EECCCTTCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred             EEecCCCCCHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCcee
Confidence            99999999999999875     67999999999999999999999   99999999999999999999999999999987


Q ss_pred             CCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          216 IPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       216 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      ...... ......||+.|+|||++.+..++.++||||||+++|+|+ +|+.||.....        .......... .. 
T Consensus       191 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~--------~~~~~~~~~~-~~-  258 (335)
T 2owb_A          191 VEYDGE-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLL-VGKPPFETSCL--------KETYLRIKKN-EY-  258 (335)
T ss_dssp             CCSTTC-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHH-HSSCTTCCSSH--------HHHHHHHHHT-CC-
T ss_pred             cccCcc-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHH-HCcCCCCCCCH--------HHHHHHHhcC-CC-
Confidence            653322 223467999999999999989999999999999999999 89999964321        1111222111 11 


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           .+.     ......+.+++.+||+.||++|||+.|+++
T Consensus       259 -----~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          259 -----SIP-----KHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             -----CCC-----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             -----CCC-----ccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                 000     112345789999999999999999999986


No 189
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00  E-value=1.3e-44  Score=332.10  Aligned_cols=268  Identities=16%  Similarity=0.168  Sum_probs=200.3

Q ss_pred             HHHHHHhccCCCCCeecccCceEEEEEEe-CCce-EEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC--
Q 045067           55 KELERATNNYHYRNIITESSIFRLCQGVL-PDRT-ISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV--  130 (347)
Q Consensus        55 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~-~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--  130 (347)
                      .++....++|...+.||+|+||.||+|.. .++. +|+|++.........+.+.+|+.++.+++||||+++++++...  
T Consensus        20 g~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTI   99 (364)
T ss_dssp             -CBCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred             cEeccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence            34444567899999999999999999998 4444 5555554444444457789999999999999999999998765  


Q ss_pred             ---CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEE
Q 045067          131 ---EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL  207 (347)
Q Consensus       131 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl  207 (347)
                         ...++||||+.+ +|.+++..      ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||
T Consensus       100 ~~~~~~~iv~e~~~~-~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl  169 (364)
T 3qyz_A          100 EQMKDVYIVQDLMET-DLYKLLKT------QHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKI  169 (364)
T ss_dssp             TTCCCEEEEEECCSE-EHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEE
T ss_pred             cccceEEEEEcccCc-CHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEE
Confidence               368999999984 99999976      56999999999999999999999   999999999999999999999999


Q ss_pred             ecCCCCccCCCCCcee--eccccccCCcccccccc-cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHH
Q 045067          208 FNFSLSASIPEGETYI--DDGVKGTSGIVAPEYAR-TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDF  284 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~~~--~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  284 (347)
                      +|||++..........  .....||+.|+|||++. +..++.++||||+||++|+|+ +|++||.....     ......
T Consensus       170 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~-----~~~~~~  243 (364)
T 3qyz_A          170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML-SNRPIFPGKHY-----LDQLNH  243 (364)
T ss_dssp             CCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHH-HSSCSSCCSSG-----GGHHHH
T ss_pred             EeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHH-HCCCCCCCCCh-----HHHHHH
Confidence            9999998765332211  23457999999999765 456899999999999999999 89999975332     111111


Q ss_pred             HHHHHhccCc---------------ccccC-CccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          285 VKKYIENRGF---------------NGIVD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       285 ~~~~~~~~~~---------------~~~~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..........               ..... ............+.++.+++.+||+.||++|||+.|+++
T Consensus       244 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          244 ILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            1111100000               00000 000000111123457889999999999999999999986


No 190
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00  E-value=1.8e-44  Score=343.42  Aligned_cols=251  Identities=22%  Similarity=0.248  Sum_probs=201.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ..+.|...+.||+|+||.||+|.. .++..+++|++...   .....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus        24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            456789999999999999999999 45544555544322   12345779999999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE---CCCCceEEecCCC
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV---SERYVPKLFNFSL  212 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~  212 (347)
                      ||||+.+|+|.+.+...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||+   +.++.+||+|||+
T Consensus       104 v~e~~~~~~L~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~  175 (484)
T 3nyv_A          104 VGEVYTGGELFDEIISR-----KRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGL  175 (484)
T ss_dssp             EECCCCSCBHHHHHHTC-----SCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTH
T ss_pred             EEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeee
Confidence            99999999999999764     67999999999999999999999   9999999999999999   4678999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      +........  .....||+.|+|||++.+ .++.++||||+||++|+|+ +|.+||.....        .......... 
T Consensus       176 a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll-~g~~pf~~~~~--------~~~~~~i~~~-  242 (484)
T 3nyv_A          176 STHFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILL-SGCPPFNGANE--------YDILKKVEKG-  242 (484)
T ss_dssp             HHHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHC-
T ss_pred             eEEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHH-HCCCCCCCCCH--------HHHHHHHHcC-
Confidence            987654332  234579999999998876 6899999999999999999 99999964321        2222222222 


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ....    .   .......++.+.+++.+||+.+|++|||+.|+++
T Consensus       243 ~~~~----~---~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          243 KYTF----E---LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             CCCC----C---SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             CCCC----C---CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            1110    0   0111233567889999999999999999999986


No 191
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00  E-value=2.1e-44  Score=326.29  Aligned_cols=264  Identities=17%  Similarity=0.154  Sum_probs=191.5

Q ss_pred             HHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           56 ELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        56 e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      .-....++|...+.||+|+||+||+|.. .++..+++|.+....  ....+.+.+|+.++++++||||+++++++.+++.
T Consensus        28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  107 (329)
T 3gbz_A           28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHR  107 (329)
T ss_dssp             ----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTE
T ss_pred             CcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCE
Confidence            3345667899999999999999999998 555656666554332  2223567899999999999999999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC-----CCCceEE
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS-----ERYVPKL  207 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~-----~~~~~kl  207 (347)
                      .++||||+++ +|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++     .++.+||
T Consensus       108 ~~lv~e~~~~-~L~~~~~~~-----~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl  178 (329)
T 3gbz_A          108 LHLIFEYAEN-DLKKYMDKN-----PDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKI  178 (329)
T ss_dssp             EEEEEECCSE-EHHHHHHHC-----TTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEE
T ss_pred             EEEEEecCCC-CHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEE
Confidence            9999999985 999999875     56999999999999999999999   99999999999999994     5556999


Q ss_pred             ecCCCCccCCCCCceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          208 FNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      +|||++........ ......||+.|+|||++.+. .++.++|||||||++|+|+ +|.+||.....        .....
T Consensus       179 ~Dfg~a~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~--------~~~~~  248 (329)
T 3gbz_A          179 GDFGLARAFGIPIR-QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML-MKTPLFPGDSE--------IDQLF  248 (329)
T ss_dssp             CCTTHHHHHC------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHH
T ss_pred             CcCCCccccCCccc-ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHH-HCCCCcCCCCH--------HHHHH
Confidence            99999976543322 22345689999999988764 5899999999999999999 89999964321        11122


Q ss_pred             HHHhc-cCcccc-------------cCCccCCch----hhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          287 KYIEN-RGFNGI-------------VDPRIIGDE----LLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       287 ~~~~~-~~~~~~-------------~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..... +.....             ..+......    .......++.+++.+||+.||++|||+.|+++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          249 KIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            22111 000000             000000000    01112457889999999999999999999986


No 192
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00  E-value=4.5e-44  Score=318.12  Aligned_cols=259  Identities=22%  Similarity=0.307  Sum_probs=196.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe--CCce--EEEEEEccCC---CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL--PDRT--ISVVKFIDGS---VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~--~~v~k~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~  133 (347)
                      .++|...+.||+|+||+||+|.+  .++.  .+++|.....   .....+.+.+|+.++++++||||+++++++.++. .
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~   95 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M   95 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence            45788999999999999999986  2322  3555555432   2344577899999999999999999999988755 8


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ++|+||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++
T Consensus        96 ~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~  168 (291)
T 1u46_A           96 KMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLM  168 (291)
T ss_dssp             EEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTC
T ss_pred             eeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccc
Confidence            9999999999999999763    256999999999999999999999   999999999999999999999999999999


Q ss_pred             ccCCCCCcee--eccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhc
Q 045067          214 ASIPEGETYI--DDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIEN  291 (347)
Q Consensus       214 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      ..........  .....+|+.|+|||.+.+..++.++||||||+++|+|++.|+.||.....        ..........
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--------~~~~~~~~~~  240 (291)
T 1u46_A          169 RALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG--------SQILHKIDKE  240 (291)
T ss_dssp             EECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH--------HHHHHHHHTS
T ss_pred             ccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH--------HHHHHHHHcc
Confidence            8775443321  23356788999999999888999999999999999999339999964321        2222222222


Q ss_pred             cCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ....       .   .....+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus       241 ~~~~-------~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~  284 (291)
T 1u46_A          241 GERL-------P---RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP  284 (291)
T ss_dssp             CCCC-------C---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred             CCCC-------C---CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence            1110       0   011234568899999999999999999999999998754


No 193
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00  E-value=1.6e-44  Score=326.43  Aligned_cols=262  Identities=18%  Similarity=0.223  Sum_probs=196.8

Q ss_pred             cccCHHHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeee
Q 045067           50 RSFSAKELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCC  127 (347)
Q Consensus        50 ~~~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~  127 (347)
                      ..++..++....+.|...+.||+|+||.||+|.+ .++..+++|+...... ..+.+.+|+.+++++ +||||+++++++
T Consensus        12 ~~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~   90 (326)
T 2x7f_A           12 DEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAF   90 (326)
T ss_dssp             ----CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEE
T ss_pred             hhccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEE
Confidence            3455556666788899999999999999999999 4555555555544332 337789999999999 799999999999


Q ss_pred             ee------CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC
Q 045067          128 LE------VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE  201 (347)
Q Consensus       128 ~~------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~  201 (347)
                      ..      ....++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.
T Consensus        91 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~  164 (326)
T 2x7f_A           91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTE  164 (326)
T ss_dssp             EECC--CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECT
T ss_pred             eeccCccccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcC
Confidence            87      46789999999999999999863   2356899999999999999999999   999999999999999999


Q ss_pred             CCceEEecCCCCccCCCCCceeeccccccCCcccccccc-----cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCC
Q 045067          202 RYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYAR-----TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNG  276 (347)
Q Consensus       202 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~  276 (347)
                      ++.+||+|||++........ ......||+.|+|||.+.     +..++.++|||||||++|+|+ +|..||.....   
T Consensus       165 ~~~~kl~Dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~---  239 (326)
T 2x7f_A          165 NAEVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA-EGAPPLCDMHP---  239 (326)
T ss_dssp             TCCEEECCCTTTC--------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH-HSSCTTTTSCH---
T ss_pred             CCCEEEeeCcCceecCcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH-hCCCCCCCCcH---
Confidence            99999999999876543221 123457899999999886     567899999999999999999 89999864321   


Q ss_pred             CCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          277 DESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           .......... ........         ..+..+.+++.+||+.||.+|||+.++++
T Consensus       240 -----~~~~~~~~~~-~~~~~~~~---------~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          240 -----MRALFLIPRN-PAPRLKSK---------KWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             -----HHHHHHHHHS-CCCCCSCS---------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -----HHHHHHhhcC-ccccCCcc---------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence                 1111111111 11111111         12346789999999999999999999987


No 194
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00  E-value=1.7e-44  Score=327.22  Aligned_cols=261  Identities=19%  Similarity=0.265  Sum_probs=186.1

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeee------
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNNVLRLIGCCL------  128 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~------  128 (347)
                      +.....+|...+.||+|+||.||+|.+ .++..+++|.+........+.+.+|+.++.++. ||||+++++++.      
T Consensus        23 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~  102 (337)
T 3ll6_A           23 VELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEES  102 (337)
T ss_dssp             EEETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTS
T ss_pred             eeccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccc
Confidence            334456789999999999999999998 444444444443334444577899999999996 999999999984      


Q ss_pred             --eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC--eEeccCCCCCeEECCCCc
Q 045067          129 --EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP--IVFRDLKSSYILVSERYV  204 (347)
Q Consensus       129 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~--ivH~dlkp~Nill~~~~~  204 (347)
                        .....++||||+. |+|.+++....  ....+++..+..++.|++.||.|||   +.+  |+||||||+|||++.++.
T Consensus       103 ~~~~~~~~lv~e~~~-g~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH---~~~~~ivH~Dikp~NIl~~~~~~  176 (337)
T 3ll6_A          103 DTGQAEFLLLTELCK-GQLVEFLKKME--SRGPLSCDTVLKIFYQTCRAVQHMH---RQKPPIIHRDLKVENLLLSNQGT  176 (337)
T ss_dssp             TTSSEEEEEEEECCS-EEHHHHHHHHH--TTCSCCHHHHHHHHHHHHHHHHHHH---TSSSCCBCCCCCGGGCEECTTSC
T ss_pred             ccCCceEEEEEEecC-CCHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCEEEccCCcccEEECCCCC
Confidence              3345799999997 69999987531  2356999999999999999999999   888  999999999999999999


Q ss_pred             eEEecCCCCccCCCCCcee-----------eccccccCCccccccc---ccCCCCCccchHHHHHHHHHHHhcCCCcccc
Q 045067          205 PKLFNFSLSASIPEGETYI-----------DDGVKGTSGIVAPEYA---RTGYLNEKCDVYSFGLLLLQLLSTGEDLFNM  270 (347)
Q Consensus       205 ~kl~Dfg~a~~~~~~~~~~-----------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~  270 (347)
                      +||+|||++..........           .....||+.|+|||++   .+..++.++|||||||++|+|+ +|..||..
T Consensus       177 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~-~g~~p~~~  255 (337)
T 3ll6_A          177 IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLC-FRQHPFED  255 (337)
T ss_dssp             EEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHH-HSSCCC--
T ss_pred             EEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHH-hCCCCCcc
Confidence            9999999998765432211           1135689999999988   5667899999999999999999 99999964


Q ss_pred             CccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          271 GLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ....        .    .... ... ...+        ...+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus       256 ~~~~--------~----~~~~-~~~-~~~~--------~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~  309 (337)
T 3ll6_A          256 GAKL--------R----IVNG-KYS-IPPH--------DTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAA  309 (337)
T ss_dssp             -----------------------CC-CCTT--------CCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hhHH--------H----hhcC-ccc-CCcc--------cccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            3210        0    0000 000 0000        01123467899999999999999999999999998653


No 195
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00  E-value=1.5e-44  Score=337.56  Aligned_cols=254  Identities=19%  Similarity=0.202  Sum_probs=189.2

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--------chhHHHHHHHHHHHHhcCCCceeeeeeeee
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--------FDAYDCCFNNIVFASQMSHNNVLRLIGCCL  128 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~  128 (347)
                      ....++|...+.||+|+||+||+|.. .++..+++|++....        ......+.+|+.++++++||||+++++++.
T Consensus       131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~  210 (419)
T 3i6u_A          131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD  210 (419)
T ss_dssp             HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred             hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence            34578899999999999999999998 444444454443211        112235889999999999999999999975


Q ss_pred             eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC---ce
Q 045067          129 EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY---VP  205 (347)
Q Consensus       129 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~---~~  205 (347)
                       .+..++||||+++|+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++   .+
T Consensus       211 -~~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~  281 (419)
T 3i6u_A          211 -AEDYYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLI  281 (419)
T ss_dssp             -SSEEEEEEECCTTCBGGGGTSSS-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCE
T ss_pred             -cCceEEEEEcCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceE
Confidence             45679999999999999988754     67999999999999999999999   99999999999999997544   59


Q ss_pred             EEecCCCCccCCCCCceeeccccccCCccccccccc---CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHH
Q 045067          206 KLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYART---GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEM  282 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~  282 (347)
                      ||+|||+++......  ......||+.|+|||++.+   ..++.++|||||||++|+|+ +|.+||.....    .... 
T Consensus       282 kl~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~ll-tg~~pf~~~~~----~~~~-  353 (419)
T 3i6u_A          282 KITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL-SGYPPFSEHRT----QVSL-  353 (419)
T ss_dssp             EECCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHH-HSSCSSCCCSS----SCCH-
T ss_pred             EEeecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHH-HCCCCCCCCcc----hHHH-
Confidence            999999998765332  2345679999999998753   57789999999999999999 89999964322    1111 


Q ss_pred             HHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          283 DFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                         ......+...       ..+......+..+.+++.+||+.||++|||+.|+++
T Consensus       354 ---~~~i~~~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          354 ---KDQITSGKYN-------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             ---HHHHHTTCCC-------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ---HHHHhcCCCC-------CCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence               1111111110       001111223567889999999999999999999986


No 196
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00  E-value=9.3e-45  Score=320.69  Aligned_cols=255  Identities=19%  Similarity=0.226  Sum_probs=199.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeee--CCccEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE--VEIPVL  135 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~l  135 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|.....  .....+.+.+|+.++++++||||+++++++.+  +...++
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l   84 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   84 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence            56788999999999999999999 45555555554432  23345678999999999999999999998854  567899


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCC-----eEeccCCCCCeEECCCCceEEecC
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRP-----IVFRDLKSSYILVSERYVPKLFNF  210 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~-----ivH~dlkp~Nill~~~~~~kl~Df  210 (347)
                      ||||+++++|.+++.... .....+++..+..++.|++.||.|||   +.+     ++||||||+||+++.++.+||+||
T Consensus        85 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~df  160 (279)
T 2w5a_A           85 VMEYCEGGDLASVITKGT-KERQYLDEEFVLRVMTQLTLALKECH---RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF  160 (279)
T ss_dssp             EEECCTTEEHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHH---HHC------CCCCCSGGGEEECSSSCEEECCC
T ss_pred             EEeCCCCCCHHHHHHhhc-ccCCCCCHHHHHHHHHHHHHHHHHHh---cccCCCCeeEEeccchhhEEEcCCCCEEEecC
Confidence            999999999999997641 12345999999999999999999999   777     999999999999999999999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      |++........ ......||+.|+|||.+.+..++.++||||||+++|+|+ +|..||.....        .... ....
T Consensus       161 g~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~--------~~~~-~~i~  229 (279)
T 2w5a_A          161 GLARILNHDTS-FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC-ALMPPFTAFSQ--------KELA-GKIR  229 (279)
T ss_dssp             CHHHHC---CH-HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHH-HHHH
T ss_pred             chheeeccccc-cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHH-HCCCCCcccCH--------HHHH-HHHh
Confidence            99877654322 123456899999999999889999999999999999999 89999964321        1222 2222


Q ss_pred             ccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHH
Q 045067          291 NRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQI  340 (347)
Q Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L  340 (347)
                      .+....+     .     ...+.++.+++.+||+.||++|||+.|+++.+
T Consensus       230 ~~~~~~~-----~-----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          230 EGKFRRI-----P-----YRYSDELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             HTCCCCC-----C-----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             hcccccC-----C-----cccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            2221111     0     12245688999999999999999999998754


No 197
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00  E-value=3e-45  Score=327.49  Aligned_cols=253  Identities=15%  Similarity=0.194  Sum_probs=196.8

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..+.|+..+.||+|+||.||+|.. .++..+++|..........+.+.+|+.+++.++||||+++++++.+++..++|||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   96 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE   96 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence            456788999999999999999999 5566666666655544555789999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus        97 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~  169 (302)
T 2j7t_A           97 FCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLK  169 (302)
T ss_dssp             CCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHH
T ss_pred             eCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCccccc
Confidence            99999999998763    256999999999999999999999   99999999999999999999999999998753221


Q ss_pred             CCceeeccccccCCccccccc-----ccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccC
Q 045067          219 GETYIDDGVKGTSGIVAPEYA-----RTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRG  293 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (347)
                      .. .......||+.|+|||.+     .+..++.++||||||+++|+|+ +|..||.....        ............
T Consensus       170 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~--------~~~~~~~~~~~~  239 (302)
T 2j7t_A          170 TL-QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA-QIEPPHHELNP--------MRVLLKIAKSDP  239 (302)
T ss_dssp             HH-HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHH-HSSCTTTTSCH--------HHHHHHHHHSCC
T ss_pred             cc-cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHh-cCCCCCccCCH--------HHHHHHHhccCC
Confidence            10 111235689999999987     3667899999999999999999 99999864321        122222222211


Q ss_pred             cccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          294 FNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       ...     .   .....+..+.+++.+||+.||++|||+.++++
T Consensus       240 -~~~-----~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          240 -PTL-----L---TPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             -CCC-----S---SGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             -ccc-----C---CccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence             111     0   11122456889999999999999999999975


No 198
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00  E-value=8.5e-44  Score=315.48  Aligned_cols=247  Identities=19%  Similarity=0.197  Sum_probs=193.9

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~l  135 (347)
                      ..++|...+.||+|+||+||+|.. .++..+++|.....  .......+.+|+..+..+ +||||+++++++.+++..++
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l   88 (289)
T 1x8b_A            9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI   88 (289)
T ss_dssp             HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred             ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            456799999999999999999999 34554555544432  233446788999999999 89999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC-------------
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER-------------  202 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~-------------  202 (347)
                      ||||+++++|.+++..... ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.+             
T Consensus        89 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~  164 (289)
T 1x8b_A           89 QNEYCNGGSLADAISENYR-IMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDED  164 (289)
T ss_dssp             EEECCTTCBHHHHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC---------------
T ss_pred             EEEecCCCcHHHHHHhhcc-cccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCcccccccccc
Confidence            9999999999999976411 1246899999999999999999999   9999999999999999844             


Q ss_pred             ------CceEEecCCCCccCCCCCceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCC
Q 045067          203 ------YVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLN  275 (347)
Q Consensus       203 ------~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~  275 (347)
                            ..+||+|||++.......     ...||+.|+|||.+.+. .+++++|||||||++|+|+ +|.+|+....   
T Consensus       165 ~~~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~~~~~~~~~~---  235 (289)
T 1x8b_A          165 DWASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAA-GAEPLPRNGD---  235 (289)
T ss_dssp             -----CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHT-TCCCCCSSSH---
T ss_pred             cccCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHh-cCCCCCcchh---
Confidence                  479999999998765432     24589999999988766 6678999999999999999 8887764211   


Q ss_pred             CCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          276 GDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                              .... ...+...     .+.     ...+..+.+++.+||+.||++|||+.|+++
T Consensus       236 --------~~~~-~~~~~~~-----~~~-----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          236 --------QWHE-IRQGRLP-----RIP-----QVLSQEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             --------HHHH-HHTTCCC-----CCS-----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------HHHH-HHcCCCC-----CCC-----cccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence                    1111 1121111     111     122456889999999999999999999985


No 199
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00  E-value=3.8e-44  Score=322.19  Aligned_cols=251  Identities=18%  Similarity=0.211  Sum_probs=195.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..+.|...+.||+|+||.||+|.. .++..+++|......  ..+.+.+|+.++.+++||||+++++++.+++..++|||
T Consensus        27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e  104 (314)
T 3com_A           27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME  104 (314)
T ss_dssp             ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence            456788999999999999999999 445555555544332  23678999999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+++++|.+++...    ...+++..+..++.+++.||.|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus       105 ~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~  177 (314)
T 3com_A          105 YCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTD  177 (314)
T ss_dssp             CCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBT
T ss_pred             cCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhh
Confidence            99999999999742    267999999999999999999999   99999999999999999999999999999976643


Q ss_pred             CCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccccc
Q 045067          219 GETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIV  298 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
                      ... ......||+.|+|||.+.+..++.++||||||+++|+|+ +|..||.....        .......... ..    
T Consensus       178 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~--------~~~~~~~~~~-~~----  242 (314)
T 3com_A          178 TMA-KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMA-EGKPPYADIHP--------MRAIFMIPTN-PP----  242 (314)
T ss_dssp             TBS-CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHH-HSSCTTTTSCH--------HHHHHHHHHS-CC----
T ss_pred             hcc-ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHH-hCCCCCCCCCh--------HHHHHHHhcC-CC----
Confidence            322 223457899999999999989999999999999999999 89999964321        1111111111 11    


Q ss_pred             CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          299 DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       299 ~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       +....   ....+..+.+++.+||+.||.+|||+.++++
T Consensus       243 -~~~~~---~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          243 -PTFRK---PELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             -CCCSS---GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             -cccCC---cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence             11111   1122456889999999999999999999986


No 200
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00  E-value=1.5e-43  Score=323.36  Aligned_cols=262  Identities=16%  Similarity=0.184  Sum_probs=195.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCCC-chhHHHHHHHHHHHHhcCCCceeeeeeeeeeC-------
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGSV-FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV-------  130 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-------  130 (347)
                      .++|...+.||+|+||+||+|.. .++ .+|+|++..... ......+.+|+.+++.++||||+++++++.+.       
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   95 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   95 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence            46799999999999999999999 444 455554433322 22235688999999999999999999998873       


Q ss_pred             -CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEec
Q 045067          131 -EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFN  209 (347)
Q Consensus       131 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~D  209 (347)
                       +..++||||+++ +|.+.+...    ...+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|
T Consensus        96 ~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~D  167 (351)
T 3mi9_A           96 KGSIYLVFDFCEH-DLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLAD  167 (351)
T ss_dssp             -CEEEEEEECCSE-EHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECC
T ss_pred             CceEEEEEeccCC-CHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEcc
Confidence             468999999985 888887653    256999999999999999999999   99999999999999999999999999


Q ss_pred             CCCCccCCCCCc---eeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHH
Q 045067          210 FSLSASIPEGET---YIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFV  285 (347)
Q Consensus       210 fg~a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  285 (347)
                      ||++........   .......||+.|+|||++.+ ..++.++|||||||++|+|+ +|.+||.....     .......
T Consensus       168 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~-----~~~~~~i  241 (351)
T 3mi9_A          168 FGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW-TRSPIMQGNTE-----QHQLALI  241 (351)
T ss_dssp             CTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH-----HHHHHHH
T ss_pred             chhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHH-hCCCCCCCCCh-----HHHHHHH
Confidence            999987653221   12234678999999998876 56899999999999999999 89999974321     1111111


Q ss_pred             HHHHhccCcccccCCccC-------------CchhhHH------HHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          286 KKYIENRGFNGIVDPRII-------------GDELLEH------KLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~-------------~~~~~~~------~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .....  .......+...             .......      ..+.+.+|+.+||+.||++|||+.|+++
T Consensus       242 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          242 SQLCG--SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHHC--CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHhC--CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            11111  11000000000             0000001      1346889999999999999999999986


No 201
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00  E-value=2.1e-43  Score=314.97  Aligned_cols=253  Identities=23%  Similarity=0.284  Sum_probs=201.6

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---------chhHHHHHHHHHHHHhcC-CCceeeeeeee
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---------FDAYDCCFNNIVFASQMS-HNNVLRLIGCC  127 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~  127 (347)
                      ...++|...+.||+|+||.||+|.. .++..+++|.+....         ....+.+.+|+.+++++. ||||+++++++
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            4457899999999999999999999 555555555554332         122456889999999995 99999999999


Q ss_pred             eeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEE
Q 045067          128 LEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL  207 (347)
Q Consensus       128 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl  207 (347)
                      .+++..++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl  165 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTEK-----VTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKL  165 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEE
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEE
Confidence            9999999999999999999999875     67999999999999999999999   999999999999999999999999


Q ss_pred             ecCCCCccCCCCCceeeccccccCCcccccccc------cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchH
Q 045067          208 FNFSLSASIPEGETYIDDGVKGTSGIVAPEYAR------TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFE  281 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~  281 (347)
                      +|||++........  .....||+.|+|||++.      ...++.++||||||+++|+|+ +|..||.....        
T Consensus       166 ~dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~--------  234 (298)
T 1phk_A          166 TDFGFSCQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL-AGSPPFWHRKQ--------  234 (298)
T ss_dssp             CCCTTCEECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------
T ss_pred             ecccchhhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHH-HCCCCCcCccH--------
Confidence            99999987654332  23457899999999875      456889999999999999999 89999864321        


Q ss_pred             HHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          282 MDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .......... ... ...      ......+..+.+++.+||+.||++|||+.|+++
T Consensus       235 ~~~~~~~~~~-~~~-~~~------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          235 MLMLRMIMSG-NYQ-FGS------PEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHHHHHHHT-CCC-CCT------TTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhcC-Ccc-cCc------ccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            1222222221 111 000      111233557889999999999999999999975


No 202
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00  E-value=3.7e-44  Score=331.30  Aligned_cols=261  Identities=17%  Similarity=0.242  Sum_probs=192.4

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEe--CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC----
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVL--PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV----  130 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----  130 (347)
                      ++...++|...+.||+|+||+||+|..  ++..+|+|++....     ....+|+.+++.++||||+++++++...    
T Consensus         2 l~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~-----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~   76 (383)
T 3eb0_A            2 LETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEE   76 (383)
T ss_dssp             ----CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred             CccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence            345677899999999999999999998  44556666554432     2234799999999999999999998543    


Q ss_pred             ----------------------------------CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHH
Q 045067          131 ----------------------------------EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVF  176 (347)
Q Consensus       131 ----------------------------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l  176 (347)
                                                        ...++||||+++ +|.+.+.... .....+++..+..++.|++.||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~aL  154 (383)
T 3eb0_A           77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFI-RSGRSIPMNLISIYIYQLFRAV  154 (383)
T ss_dssp             ---------------------------------CCEEEEEECCCSE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHH
Confidence                                              348899999984 8888776421 1236799999999999999999


Q ss_pred             HHhhcCCCCCeEeccCCCCCeEEC-CCCceEEecCCCCccCCCCCceeeccccccCCcccccccccC-CCCCccchHHHH
Q 045067          177 AYLHIGFSRPIVFRDLKSSYILVS-ERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFG  254 (347)
Q Consensus       177 ~~lH~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G  254 (347)
                      .|||   +.+|+||||||+|||++ .++.+||+|||+++.......  .....||+.|+|||.+.+. .++.++||||+|
T Consensus       155 ~~LH---~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  229 (383)
T 3eb0_A          155 GFIH---SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIG  229 (383)
T ss_dssp             HHHH---TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             HHHH---HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHH
Confidence            9999   99999999999999998 688999999999987654332  2345789999999988764 589999999999


Q ss_pred             HHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh-------------ccCcccccCCccCCch----hhHHHHHHHHH
Q 045067          255 LLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE-------------NRGFNGIVDPRIIGDE----LLEHKLQSSFE  317 (347)
Q Consensus       255 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~  317 (347)
                      |++|+|+ +|++||.....        .+.......             .....+..-+......    .....+.++.+
T Consensus       230 ~il~ell-~g~~pf~~~~~--------~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (383)
T 3eb0_A          230 CVFGELI-LGKPLFSGETS--------IDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAID  300 (383)
T ss_dssp             HHHHHHH-HSSCSSCCSSH--------HHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred             HHHHHHH-hCCCCCCCCCh--------HHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHH
Confidence            9999999 89999975322        111111111             0011111111111110    11123456889


Q ss_pred             HHHHhccCCCCCCCCHHHHHH
Q 045067          318 LAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       318 l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ++.+||+.||++|||+.|+++
T Consensus       301 li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          301 LLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHHccCChhhCCCHHHHhc
Confidence            999999999999999999984


No 203
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00  E-value=2.3e-43  Score=333.86  Aligned_cols=263  Identities=16%  Similarity=0.179  Sum_probs=204.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCC-CceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSH-NNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .++|...+.||+|+||.||+|.+ .++..+++|+......  .+.+.+|+.++..++| +++..+..++...+..+||||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme   83 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD   83 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence            46799999999999999999998 5555555555443322  1458899999999976 566667777778889999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE---CCCCceEEecCCCCcc
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV---SERYVPKLFNFSLSAS  215 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill---~~~~~~kl~Dfg~a~~  215 (347)
                      |+ +++|.+++...    ...+++..++.++.||+.||.|||   +.+|+||||||+|||+   +.++.+||+|||+++.
T Consensus        84 ~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~  155 (483)
T 3sv0_A           84 LL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK  155 (483)
T ss_dssp             CC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred             CC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence            99 78999999752    267999999999999999999999   9999999999999999   6889999999999987


Q ss_pred             CCCCCce------eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          216 IPEGETY------IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       216 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      .......      ......||+.|+|||.+.+..++.++|||||||++|||+ +|+.||.....     ...........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~ell-tG~~Pf~~~~~-----~~~~~~~~~i~  229 (483)
T 3sv0_A          156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFL-RGSLPWQGLKA-----GTKKQKYEKIS  229 (483)
T ss_dssp             CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHH-HSSCTTSSCCC-----SSHHHHHHHHH
T ss_pred             ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHH-hCCCCCccccc-----hhHHHHHHHHh
Confidence            6543321      122567999999999999999999999999999999999 89999975322     11111111111


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ... .....      .......+.++.+++.+||+.+|++||++.+|++.|+++...
T Consensus       230 ~~~-~~~~~------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~  279 (483)
T 3sv0_A          230 EKK-VATSI------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIR  279 (483)
T ss_dssp             HHH-HHSCH------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hcc-ccccH------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHH
Confidence            110 00000      011112245788999999999999999999999999998653


No 204
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00  E-value=6.2e-44  Score=351.07  Aligned_cols=249  Identities=16%  Similarity=0.227  Sum_probs=201.9

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC---CchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccE
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS---VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~  134 (347)
                      ..++|...++||+|+||.||+|.. .++..+++|++...   .....+.+.+|..++..+ +||||+.+++++.+.+.+|
T Consensus       339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~  418 (674)
T 3pfq_A          339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY  418 (674)
T ss_dssp             -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred             cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence            456899999999999999999999 55555555554432   122346788999999988 7999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      |||||+++|+|.+++...     ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+|||+++
T Consensus       419 lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~  490 (674)
T 3pfq_A          419 FVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK  490 (674)
T ss_dssp             EEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCE
T ss_pred             EEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceee
Confidence            999999999999999875     67999999999999999999999   9999999999999999999999999999998


Q ss_pred             cCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCc
Q 045067          215 SIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGF  294 (347)
Q Consensus       215 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (347)
                      ....... .....+||+.|+|||++.+..++.++|||||||++|||+ +|++||.....        ........... .
T Consensus       491 ~~~~~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyell-tG~~Pf~~~~~--------~~~~~~i~~~~-~  559 (674)
T 3pfq_A          491 ENIWDGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML-AGQAPFEGEDE--------DELFQSIMEHN-V  559 (674)
T ss_dssp             ECCCTTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHSSC-C
T ss_pred             ccccCCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHH-cCCCCCCCCCH--------HHHHHHHHhCC-C
Confidence            6443322 234578999999999999999999999999999999999 89999964321        22233332211 1


Q ss_pred             ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCH-----HHHHH
Q 045067          295 NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTM-----IDVAK  338 (347)
Q Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~-----~ell~  338 (347)
                            .     .+...+.++.+|+.+||+.||++||++     .||++
T Consensus       560 ------~-----~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~  597 (674)
T 3pfq_A          560 ------A-----YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE  597 (674)
T ss_dssp             ------C-----CCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred             ------C-----CCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence                  0     011234568899999999999999997     56553


No 205
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00  E-value=7.4e-44  Score=326.75  Aligned_cols=267  Identities=15%  Similarity=0.174  Sum_probs=195.6

Q ss_pred             CHHHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCc----------hhHHHHHHHHHHHHhcCCCcee
Q 045067           53 SAKELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVF----------DAYDCCFNNIVFASQMSHNNVL  121 (347)
Q Consensus        53 ~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~----------~~~~~~~~E~~~l~~l~h~niv  121 (347)
                      ...++....++|...+.||+|+||.||+|.. ++..+|+|++......          ...+.+.+|+.++++++||||+
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv   92 (362)
T 3pg1_A           13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL   92 (362)
T ss_dssp             HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred             HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence            4568888999999999999999999999998 5555666655432221          1236789999999999999999


Q ss_pred             eeeeeeeeC-----CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCC
Q 045067          122 RLIGCCLEV-----EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSY  196 (347)
Q Consensus       122 ~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~N  196 (347)
                      ++++++...     ...++||||++ |+|.+.+...    ...+++..+..++.|++.||.|||   +.+|+||||||+|
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~N  164 (362)
T 3pg1_A           93 GLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQ----RIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGN  164 (362)
T ss_dssp             CCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCT----TSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGG
T ss_pred             ceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHH
Confidence            999998543     35799999998 5888888753    357999999999999999999999   9999999999999


Q ss_pred             eEECCCCceEEecCCCCccCCCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCC
Q 045067          197 ILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLN  275 (347)
Q Consensus       197 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~  275 (347)
                      |+++.++.+||+|||++........  .....||+.|+|||++.+ ..++.++||||+||++|+|+ +|+.||.....  
T Consensus       165 Il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~--  239 (362)
T 3pg1_A          165 ILLADNNDITICDFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKALFRGSTF--  239 (362)
T ss_dssp             EEECTTCCEEECCTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH--
T ss_pred             EEEcCCCCEEEEecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHH-hCCCCCCCCCH--
Confidence            9999999999999999975443322  234578999999998876 67899999999999999999 89999965321  


Q ss_pred             CCCchHHHHHHHHHhc---cC---------------cccccCCcc--CCchhhHHHHHHHHHHHHHhccCCCCCCCCHHH
Q 045067          276 GDESFEMDFVKKYIEN---RG---------------FNGIVDPRI--IGDELLEHKLQSSFELAFQCQSASAEDRPTMID  335 (347)
Q Consensus       276 ~~~~~~~~~~~~~~~~---~~---------------~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~e  335 (347)
                            ..........   ..               .........  ......+...+.+.+++.+||+.||++|||+.|
T Consensus       240 ------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  313 (362)
T 3pg1_A          240 ------YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQ  313 (362)
T ss_dssp             ------HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             ------HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHH
Confidence                  1111111110   00               000000000  000111122456889999999999999999999


Q ss_pred             HHH
Q 045067          336 VAK  338 (347)
Q Consensus       336 ll~  338 (347)
                      +++
T Consensus       314 ll~  316 (362)
T 3pg1_A          314 ALR  316 (362)
T ss_dssp             HHT
T ss_pred             HHc
Confidence            986


No 206
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00  E-value=1.1e-43  Score=332.65  Aligned_cols=199  Identities=20%  Similarity=0.191  Sum_probs=170.1

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhc------CCCceeeeeeeeeeCCc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQM------SHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~  132 (347)
                      ....|...+.||+|+||+||+|.. .++..+++|++.... ...+.+.+|+.+++.+      +|+||+++++++...+.
T Consensus        95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred             ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence            345688899999999999999998 556666666665432 3336678899988887      57799999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc--eEEecC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV--PKLFNF  210 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~--~kl~Df  210 (347)
                      .++||||+. ++|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.  +||+||
T Consensus       174 ~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DF  246 (429)
T 3kvw_A          174 ICMTFELLS-MNLYELIKKN---KFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDF  246 (429)
T ss_dssp             EEEEECCCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCC
T ss_pred             EEEEEeccC-CCHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeec
Confidence            999999997 5999999864   2345999999999999999999999   899999999999999999887  999999


Q ss_pred             CCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccC
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMG  271 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~  271 (347)
                      |++......    .....||+.|+|||++.+..++.++|||||||++|||+ +|.+||...
T Consensus       247 G~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tG~~pf~~~  302 (429)
T 3kvw_A          247 GSSCYEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL-TGYPLLPGE  302 (429)
T ss_dssp             TTCEETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHH-HSSCSSCCS
T ss_pred             ccceecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHH-hCCCCCCCC
Confidence            999765432    23457899999999999999999999999999999999 899999653


No 207
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00  E-value=8e-44  Score=316.32  Aligned_cols=253  Identities=16%  Similarity=0.196  Sum_probs=184.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC-CchhHH-HHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS-VFDAYD-CCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~-~~~~~~-~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .++|+..+.||+|+||+||+|.. .++..+++|..... ...... .+..+...++.++||||+++++++.+++..++||
T Consensus         6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~   85 (290)
T 3fme_A            6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM   85 (290)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred             HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence            56789999999999999999999 45555555544432 322223 3444555578889999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR-PIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      ||+++ +|.+++.... .....+++..+..++.|++.||.|||   +. +|+||||||+||+++.++.+||+|||++...
T Consensus        86 e~~~~-~l~~~l~~~~-~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~  160 (290)
T 3fme_A           86 ELMDT-SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL  160 (290)
T ss_dssp             ECCSE-EHHHHHHHHH-HTTCCCCHHHHHHHHHHHHHHHHHHH---HHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred             ehhcc-chHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence            99985 8888876421 12367999999999999999999999   87 9999999999999999999999999999766


Q ss_pred             CCCCceeeccccccCCccccccc----ccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYA----RTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      .....  .....||+.|+|||.+    .+..++.++||||+||++|+|+ +|+.||.....       ............
T Consensus       161 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~~-------~~~~~~~~~~~~  230 (290)
T 3fme_A          161 VDDVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA-ILRFPYDSWGT-------PFQQLKQVVEEP  230 (290)
T ss_dssp             -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHH-HTSCSSCCCSC-------HHHHHHHHHHSC
T ss_pred             ccccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHH-HCCCCccccCc-------hHHHHHHHhccC
Confidence            44322  2334799999999985    5667899999999999999999 99999964211       222222322221


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..      ....    ...+.++.+++.+||+.||++|||+.|+++
T Consensus       231 ~~------~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          231 SP------QLPA----DKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             CC------CCCT----TTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CC------Cccc----ccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            11      1111    122456889999999999999999999987


No 208
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00  E-value=1.6e-43  Score=320.31  Aligned_cols=256  Identities=16%  Similarity=0.215  Sum_probs=195.1

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeee--CCccEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNNVLRLIGCCLE--VEIPVLVF  137 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--~~~~~lv~  137 (347)
                      ++|+..+.||+|+||+||+|.. .++..+++|++....   .+.+.+|+.++++++ ||||+++++++.+  ....++||
T Consensus        36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~  112 (330)
T 3nsz_A           36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF  112 (330)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred             CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence            6788999999999999999998 555556666555432   367899999999997 9999999999987  56789999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCC-ceEEecCCCCccC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERY-VPKLFNFSLSASI  216 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~-~~kl~Dfg~a~~~  216 (347)
                      ||+++++|.+++.        .+++..+..++.|++.||+|||   +.+|+||||||+|||++.++ .+||+|||++...
T Consensus       113 e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          113 EHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  181 (330)
T ss_dssp             ECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred             eccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence            9999999999884        4889999999999999999999   99999999999999999776 8999999999876


Q ss_pred             CCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHH--------HHH
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDF--------VKK  287 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--------~~~  287 (347)
                      .....  .....||+.|+|||.+.+ ..++.++|||||||++|+|+ +|..||.....   ........        ...
T Consensus       182 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll-~g~~p~~~~~~---~~~~l~~~~~~~~~~~~~~  255 (330)
T 3nsz_A          182 HPGQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHD---NYDQLVRIAKVLGTEDLYD  255 (330)
T ss_dssp             CTTCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHH-HTCSSSSCCSS---HHHHHHHHHHHHCHHHHHH
T ss_pred             CCCCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHH-hCCCCcccCCc---hHHHHHHHHHhcCCchhhh
Confidence            54332  234578999999998876 67899999999999999999 89988853221   00000000        000


Q ss_pred             HHhccCc--------------ccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          288 YIENRGF--------------NGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       288 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .......              ..... ...........+.++.+++.+||+.||++|||+.|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          256 YIDKYNIELDPRFNDILGRHSRKRWE-RFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHTTCCCCTHHHHHHCCCCCCCGG-GGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHhccccccchhhhhhhccccchh-hhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0000000              00000 00011111224567899999999999999999999986


No 209
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00  E-value=1.4e-43  Score=320.48  Aligned_cols=260  Identities=19%  Similarity=0.185  Sum_probs=199.5

Q ss_pred             HHHHHHHhccCCCC-CeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhc-CCCceeeeeeeee
Q 045067           54 AKELERATNNYHYR-NIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQM-SHNNVLRLIGCCL  128 (347)
Q Consensus        54 ~~e~~~~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~  128 (347)
                      +...+...+.|... +.||+|+||.||+|.. .++..+++|++...  .......+.+|+.++..+ +||||+++++++.
T Consensus        20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~   99 (327)
T 3lm5_A           20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE   99 (327)
T ss_dssp             SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence            33445566677776 8899999999999999 44555555544432  223346789999999999 5799999999999


Q ss_pred             eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC---CCce
Q 045067          129 EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE---RYVP  205 (347)
Q Consensus       129 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~---~~~~  205 (347)
                      +.+..++||||+++|+|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.   ++.+
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~  173 (327)
T 3lm5_A          100 NTSEIILILEYAAGGEIFSLCLPE---LAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDI  173 (327)
T ss_dssp             CSSEEEEEEECCTTEEGGGGGSSC---C-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCE
T ss_pred             eCCeEEEEEEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcE
Confidence            999999999999999999998643   3367999999999999999999999   999999999999999997   7899


Q ss_pred             EEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHH
Q 045067          206 KLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFV  285 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  285 (347)
                      ||+|||++........  .....||+.|+|||++.+..++.++||||||+++|+|+ +|..||.....        ....
T Consensus       174 kL~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll-~g~~pf~~~~~--------~~~~  242 (327)
T 3lm5_A          174 KIVDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL-THTSPFVGEDN--------QETY  242 (327)
T ss_dssp             EECCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHH
T ss_pred             EEeeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCc--------hHHH
Confidence            9999999987654322  23457999999999999999999999999999999999 89999964321        1111


Q ss_pred             HHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          286 KKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ...... ... ..      .......+..+.+++.+||+.||++|||+.++++
T Consensus       243 ~~i~~~-~~~-~~------~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          243 LNISQV-NVD-YS------EETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHHT-CCC-CC------TTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHhc-ccc-cC------chhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            111111 100 00      0111123456889999999999999999999975


No 210
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00  E-value=9.1e-44  Score=313.82  Aligned_cols=248  Identities=21%  Similarity=0.262  Sum_probs=190.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|......   ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV   89 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence            35788899999999999999998 344444555443221   22346788999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.++.++|+|||++...
T Consensus        90 ~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~  161 (276)
T 2h6d_A           90 MEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM  161 (276)
T ss_dssp             EECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCC
T ss_pred             EeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeeccccccc
Confidence            9999999999999875     57999999999999999999999   999999999999999999999999999999776


Q ss_pred             CCCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFN  295 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (347)
                      .....  .....+|+.|+|||.+.+..+ +.++||||||+++|+|+ +|..||.....        ...... ...+...
T Consensus       162 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~p~~~~~~--------~~~~~~-~~~~~~~  229 (276)
T 2h6d_A          162 SDGEF--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALL-CGTLPFDDEHV--------PTLFKK-IRGGVFY  229 (276)
T ss_dssp             CC---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHH-HHHCCCC
T ss_pred             CCCcc--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHH-hCCCCCCCCcH--------HHHHHH-hhcCccc
Confidence            54322  234568999999999887765 68999999999999999 89999964221        112222 2221110


Q ss_pred             cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          296 GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       296 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                        . +        ...+..+.+++.+||+.||++|||+.|+++.
T Consensus       230 --~-~--------~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h  262 (276)
T 2h6d_A          230 --I-P--------EYLNRSVATLLMHMLQVDPLKRATIKDIREH  262 (276)
T ss_dssp             --C-C--------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred             --C-c--------hhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence              0 0        1123457899999999999999999999873


No 211
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00  E-value=1e-43  Score=329.32  Aligned_cols=263  Identities=16%  Similarity=0.164  Sum_probs=198.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC--------CCceeeeeeeee---
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS--------HNNVLRLIGCCL---  128 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~---  128 (347)
                      .++|...+.||+|+||+||+|.. .++..+++|++... ....+.+.+|+.+++.++        ||||+++++++.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            47799999999999999999998 56666666666543 234477899999999985        788999999987   


Q ss_pred             -eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEECCCC---
Q 045067          129 -EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR-PIVFRDLKSSYILVSERY---  203 (347)
Q Consensus       129 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlkp~Nill~~~~---  203 (347)
                       +....++||||+. ++|.+.+...   ....+++..+..++.|++.||.|||   ++ +|+||||||+|||++.++   
T Consensus       115 ~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~givHrDikp~NIll~~~~~~~  187 (397)
T 1wak_A          115 VNGTHICMVFEVLG-HHLLKWIIKS---NYQGLPLPCVKKIIQQVLQGLDYLH---TKCRIIHTDIKPENILLSVNEQYI  187 (397)
T ss_dssp             TTEEEEEEEECCCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECCCCSGGGEEECCCHHHH
T ss_pred             CCCceEEEEEeccC-ccHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHeeEeccchhh
Confidence             4568999999995 5777776553   2356999999999999999999999   87 999999999999999775   


Q ss_pred             ----------------------------------------------ceEEecCCCCccCCCCCceeeccccccCCccccc
Q 045067          204 ----------------------------------------------VPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPE  237 (347)
Q Consensus       204 ----------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE  237 (347)
                                                                    .+||+|||++......    .....||+.|+|||
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~----~~~~~gt~~y~aPE  263 (397)
T 1wak_A          188 RRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH----FTEDIQTRQYRSLE  263 (397)
T ss_dssp             HHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC----SCSCCSCGGGCCHH
T ss_pred             hhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc----CccCCCCCcccCCh
Confidence                                                          7999999999776432    23357899999999


Q ss_pred             ccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh---c--------cCc-ccccCC-----
Q 045067          238 YARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE---N--------RGF-NGIVDP-----  300 (347)
Q Consensus       238 ~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~--------~~~-~~~~~~-----  300 (347)
                      ++.+..++.++|||||||++|+|+ +|+.||......  ..............   .        +.. ...+..     
T Consensus       264 ~~~~~~~~~~~DiwslG~il~ell-tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  340 (397)
T 1wak_A          264 VLIGSGYNTPADIWSTACMAFELA-TGDYLFEPHSGE--EYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLK  340 (397)
T ss_dssp             HHHTSCCCTHHHHHHHHHHHHHHH-HSSCSCCCCCCS--SSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBS
T ss_pred             hhcCCCCCcHHHHHHHHHHHHHHh-hCCCCCCCCccc--ccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccc
Confidence            999999999999999999999999 899999754321  11111111111111   0        000 000000     


Q ss_pred             -----ccC--------CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          301 -----RII--------GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       301 -----~~~--------~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           ...        ........+..+.+|+.+||+.||++|||+.|+++
T Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          341 HITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             SCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             cccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence                 000        00112455678999999999999999999999986


No 212
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00  E-value=1.6e-44  Score=328.39  Aligned_cols=256  Identities=16%  Similarity=0.202  Sum_probs=196.7

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhHHHHHHHHHH-HHhcCCCceeeeeeeeeeCCccE
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAYDCCFNNIVF-ASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      ....++|...+.||+|+||+||+|.. .++..+++|.+. .........+..|..+ ++.++||||+++++++.+++..+
T Consensus        47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~  126 (340)
T 3an0_A           47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVW  126 (340)
T ss_dssp             CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEE
T ss_pred             EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEE
Confidence            34457788889999999999999998 455544444443 3333344556666666 67789999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR-PIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      +||||+++ +|.+++.... .....+++..+..++.|++.||.|||   +. +|+||||||+|||++.++.+||+|||++
T Consensus       127 lv~e~~~~-~L~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~  201 (340)
T 3an0_A          127 ICMELMDT-SLDKFYKQVI-DKGQTIPEDILGKIAVSIVKALEHLH---SKLSVIHRDVKPSNVLINALGQVKMCDFGIS  201 (340)
T ss_dssp             EEECCCSE-EHHHHHHHHH-HTSCCCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCSCCSTTEEECSTTCEEECCCSHH
T ss_pred             EEHHHhhC-cHHHHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeCCCc
Confidence            99999985 9999886421 12367999999999999999999999   76 9999999999999999999999999998


Q ss_pred             ccCCCCCceeeccccccCCcccccccc----cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYAR----TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      .......  ......||+.|+|||++.    ...++.++|||||||++|||+ +|+.||.....       .........
T Consensus       202 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~-tg~~p~~~~~~-------~~~~~~~~~  271 (340)
T 3an0_A          202 GYLVDSV--AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA-ILRFPYDSWGT-------PFQQLKQVV  271 (340)
T ss_dssp             HHHSCHH--HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHH-HTSCSSCCCSC-------HHHHHHHHH
T ss_pred             eeccccc--ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHH-HCCCCCccccc-------hHHHHHHHh
Confidence            7654321  123357999999999864    347899999999999999999 89999964211       122222222


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ....      +...    ....+.++.+++.+||+.||++|||+.|+++
T Consensus       272 ~~~~------~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  310 (340)
T 3an0_A          272 EEPS------PQLP----ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  310 (340)
T ss_dssp             HSCC------CCCC----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cCCC------CCCC----cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            2211      1111    1123456889999999999999999999987


No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00  E-value=4.6e-43  Score=322.58  Aligned_cols=256  Identities=19%  Similarity=0.198  Sum_probs=188.3

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC------
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE------  131 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------  131 (347)
                      .++|...+.||+|+||.||+|.. .++ .+|+|++.... .....+.+.+|+.+++.++||||+++++++...+      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~  103 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ  103 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred             hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence            46789999999999999999998 444 45555544332 2334467889999999999999999999987654      


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                      ..++||||+++ +|.+.+.       ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       104 ~~~lv~e~~~~-~l~~~~~-------~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg  172 (371)
T 2xrw_A          104 DVYIVMELMDA-NLCQVIQ-------MELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG  172 (371)
T ss_dssp             EEEEEEECCSE-EHHHHHH-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred             ceEEEEEcCCC-CHHHHHh-------hccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEee
Confidence            67999999985 8888885       35899999999999999999999   9999999999999999999999999999


Q ss_pred             CCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh-
Q 045067          212 LSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE-  290 (347)
Q Consensus       212 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-  290 (347)
                      +++......  ......||+.|+|||++.+..++.++||||+||++|+|+ +|+.||.....        ......... 
T Consensus       173 ~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~--------~~~~~~i~~~  241 (371)
T 2xrw_A          173 LARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI-KGGVLFPGTDH--------IDQWNKVIEQ  241 (371)
T ss_dssp             C------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHC-
T ss_pred             ccccccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHHH
Confidence            997654322  223467999999999999999999999999999999999 89999965321        111111111 


Q ss_pred             ---------------------ccC-cc-----cccCCcc-C-CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 ---------------------NRG-FN-----GIVDPRI-I-GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ---------------------~~~-~~-----~~~~~~~-~-~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                                           ... ..     ....... . ..........++.+|+.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          242 LGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence                                 000 00     0000000 0 01112234668899999999999999999999986


No 214
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00  E-value=9.9e-45  Score=324.10  Aligned_cols=267  Identities=21%  Similarity=0.269  Sum_probs=183.7

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccC-CCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEE
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDG-SVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~l  135 (347)
                      ....++|...+.||+|+||.||+|.. .++..+++|.... ......+.+.+|+.++++++||||+++++++...+..++
T Consensus        11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   90 (303)
T 2vwi_A           11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL   90 (303)
T ss_dssp             --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred             ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence            44567899999999999999999998 4444555554443 223345678899999999999999999999999999999


Q ss_pred             EEEeCCCCCHHHHHhhhcc---CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          136 VFESAEYGNLHDLLKRSYQ---SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      ||||+++++|.+++.....   .....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||+
T Consensus        91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~  167 (303)
T 2vwi_A           91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGV  167 (303)
T ss_dssp             EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred             EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence            9999999999999874211   12356899999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCc----eeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHH
Q 045067          213 SASIPEGET----YIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKK  287 (347)
Q Consensus       213 a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  287 (347)
                      +........    .......||+.|+|||.+.+ ..++.++||||||+++|+|+ +|+.||.....     .   .....
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~-----~---~~~~~  238 (303)
T 2vwi_A          168 SAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA-TGAAPYHKYPP-----M---KVLML  238 (303)
T ss_dssp             HHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHH-HSSCTTTTSCG-----G---GHHHH
T ss_pred             hheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHH-hCCCCCccCch-----h---hHHHH
Confidence            876643321    11234578999999998865 56899999999999999999 89999965322     0   11111


Q ss_pred             HHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          288 YIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..... ... ..............+..+.+++.+||+.||.+|||+.++++
T Consensus       239 ~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          239 TLQND-PPS-LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHTSS-CCC-TTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HhccC-CCc-cccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            11111 000 00000000111122456889999999999999999999986


No 215
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00  E-value=2e-43  Score=318.80  Aligned_cols=253  Identities=19%  Similarity=0.199  Sum_probs=194.4

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--------chhHHHHHHHHHHHHhcCCCceeeeeeeeee
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--------FDAYDCCFNNIVFASQMSHNNVLRLIGCCLE  129 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  129 (347)
                      ...++|...+.||+|+||.||+|.. .++..+++|.+....        ......+.+|+.++++++||||+++++++..
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~   86 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA   86 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence            3456799999999999999999998 555555555544321        1223458899999999999999999999876


Q ss_pred             CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc---eE
Q 045067          130 VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV---PK  206 (347)
Q Consensus       130 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~---~k  206 (347)
                      +. .++||||+++++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.   +|
T Consensus        87 ~~-~~lv~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~k  157 (322)
T 2ycf_A           87 ED-YYIVLELMEGGELFDKVVGN-----KRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIK  157 (322)
T ss_dssp             SS-EEEEEECCTTEETHHHHSTT-----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEE
T ss_pred             Cc-eEEEEecCCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEE
Confidence            54 89999999999999999764     67999999999999999999999   999999999999999987664   99


Q ss_pred             EecCCCCccCCCCCceeeccccccCCcccccccc---cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHH
Q 045067          207 LFNFSLSASIPEGETYIDDGVKGTSGIVAPEYAR---TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMD  283 (347)
Q Consensus       207 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  283 (347)
                      |+|||++.......  ......||+.|+|||++.   ...++.++|||||||++|+|+ +|..||.....    ......
T Consensus       158 l~Dfg~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~----~~~~~~  230 (322)
T 2ycf_A          158 ITDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL-SGYPPFSEHRT----QVSLKD  230 (322)
T ss_dssp             ECCCTTCEECCCCH--HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHH-HSSCSSCSTTC----SSCHHH
T ss_pred             EccCccceeccccc--ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHH-hCCCCCcccch----HHHHHH
Confidence            99999998764332  123456899999999864   567899999999999999999 99999964322    111111


Q ss_pred             HHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          284 FVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                          ....+...       ..+......+..+.+++.+||+.||++|||+.++++
T Consensus       231 ----~~~~~~~~-------~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          231 ----QITSGKYN-------FIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             ----HHHHTCCC-------CCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ----HHHhCccc-------cCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence                11111110       001111223557889999999999999999999985


No 216
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00  E-value=3.5e-43  Score=313.62  Aligned_cols=260  Identities=17%  Similarity=0.173  Sum_probs=196.7

Q ss_pred             ccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC--chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEEE
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ++|...+.||+|+||.||+|.. .++..+++|......  ....+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (299)
T 2r3i_A            3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence            5788889999999999999999 455555555544322  2223678899999999999999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPE  218 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~  218 (347)
                      |+. ++|.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||++.....
T Consensus        83 ~~~-~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~  155 (299)
T 2r3i_A           83 FLH-QDLKKFMDAS---ALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGV  155 (299)
T ss_dssp             CCS-EEHHHHHHHT---TTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCC
T ss_pred             ccc-CCHHHHHHhh---hccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccC
Confidence            998 5999999764   2346899999999999999999999   99999999999999999999999999999876543


Q ss_pred             CCceeeccccccCCcccccccccCC-CCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhc-cCccc
Q 045067          219 GETYIDDGVKGTSGIVAPEYARTGY-LNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIEN-RGFNG  296 (347)
Q Consensus       219 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  296 (347)
                      ... ......+|+.|+|||.+.+.. ++.++|||||||++|+|+ +|+.||.....        .......... +....
T Consensus       156 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~-~g~~pf~~~~~--------~~~~~~~~~~~~~~~~  225 (299)
T 2r3i_A          156 PVR-TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMV-TRRALFPGDSE--------IDQLFRIFRTLGTPDE  225 (299)
T ss_dssp             CSB-CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHHHHHCCCCT
T ss_pred             Ccc-ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHH-hCCCCCCCccH--------HHHHHHHHHHhCCCch
Confidence            221 123356899999999887754 799999999999999999 99999964321        1112222211 10000


Q ss_pred             c----------cCCccC---Cc---hhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          297 I----------VDPRII---GD---ELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       297 ~----------~~~~~~---~~---~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .          ..+...   ..   ......+.++.+++.+||+.||++|||+.|+++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~  283 (299)
T 2r3i_A          226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  283 (299)
T ss_dssp             TTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            0          000000   00   001123457889999999999999999999986


No 217
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00  E-value=1.2e-43  Score=329.02  Aligned_cols=257  Identities=19%  Similarity=0.212  Sum_probs=193.7

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC------cc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE------IP  133 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------~~  133 (347)
                      ..+|...+.||+|+||+||+|.. .++.+++||+......     ..+|+.+++.++||||+++++++....      ..
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~  113 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFL  113 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEE
T ss_pred             cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEE
Confidence            35688999999999999999999 6777888888765432     237999999999999999999986544      37


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC-CCCceEEecCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS-ERYVPKLFNFSL  212 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~-~~~~~kl~Dfg~  212 (347)
                      ++||||+++ ++.+.+... ......+++..+..++.|++.||+|||   +.+|+||||||+|||++ .++.+||+|||+
T Consensus       114 ~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~  188 (394)
T 4e7w_A          114 NLVLEYVPE-TVYRASRHY-AKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGS  188 (394)
T ss_dssp             EEEEECCSE-EHHHHHHHH-HHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             EEEeeccCc-cHHHHHHHH-HhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence            899999987 554444321 112367999999999999999999999   99999999999999999 799999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh-
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE-  290 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-  290 (347)
                      ++.......  .....||+.|+|||++.+. .++.++||||+||++|||+ +|++||.....        ........+ 
T Consensus       189 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~--------~~~l~~i~~~  257 (394)
T 4e7w_A          189 AKILIAGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELM-QGQPLFPGESG--------IDQLVEIIKV  257 (394)
T ss_dssp             CEECCTTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHH
T ss_pred             cccccCCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHHH
Confidence            987654332  2346789999999988764 6899999999999999999 99999975321        111111111 


Q ss_pred             ------------ccCcccccCCccCCch----hhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 ------------NRGFNGIVDPRIIGDE----LLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                                  ........-+......    .....++++.+|+.+||+.||++|||+.|+++
T Consensus       258 ~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          258 LGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence                        0000000001111100    11123457899999999999999999999986


No 218
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00  E-value=6.4e-43  Score=319.28  Aligned_cols=263  Identities=17%  Similarity=0.182  Sum_probs=195.6

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC-----Cc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV-----EI  132 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-----~~  132 (347)
                      ..++|...+.||+|+||.||+|.+ .++..+++|.+. .........+.+|+.++++++||||+++++++...     ..
T Consensus         9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A            9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            356789999999999999999999 445545555444 33344456788999999999999999999988764     67


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .++||||+. |+|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||+
T Consensus        89 ~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~  158 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGL  158 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred             EEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccc
Confidence            899999998 599999976      57999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCCce---------eeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHH
Q 045067          213 SASIPEGETY---------IDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEM  282 (347)
Q Consensus       213 a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~  282 (347)
                      +.........         ......||+.|+|||++.+ ..++.++|||||||++|+|+ +|.+||.....     ....
T Consensus       159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~-----~~~~  232 (353)
T 2b9h_A          159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELF-LRRPIFPGRDY-----RHQL  232 (353)
T ss_dssp             CEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHH-HSSCSCCCSSH-----HHHH
T ss_pred             ccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHH-hCCCCCCCCCc-----HHHH
Confidence            9876532211         1123468999999997654 78899999999999999999 99999975321     0000


Q ss_pred             HHHHHHHhccCccccc-----------------CCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          283 DFVKKYIENRGFNGIV-----------------DPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       283 ~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ................                 .+........+..+..+.+++.+||+.||++|||+.|+++
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          233 LLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             HHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            1111111000000000                 0000000111233557889999999999999999999986


No 219
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00  E-value=2e-43  Score=324.23  Aligned_cols=255  Identities=20%  Similarity=0.244  Sum_probs=178.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCc-eEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC------C
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDR-TISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV------E  131 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~-~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~  131 (347)
                      .++|...+.||+|+||.||+|.. .++ .+|+|++.... .....+.+.+|+.+++.++||||+++++++...      .
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~  107 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN  107 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence            47899999999999999999998 444 45555443322 233456788999999999999999999998754      5


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                      ..++|+|++ +++|.+++..      ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.++.+||+|||
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG  177 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG  177 (367)
T ss_dssp             CCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC--
T ss_pred             eEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeecc
Confidence            679999999 5799999865      57999999999999999999999   9999999999999999999999999999


Q ss_pred             CCccCCCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          212 LSASIPEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       212 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      +++.....    .....||+.|+|||++.+ ..++.++||||+||++|||+ +|++||.....        .........
T Consensus       178 ~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell-~g~~pf~~~~~--------~~~l~~i~~  244 (367)
T 2fst_X          178 LARHTADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL-TGRTLFPGTDH--------IDQLKLILR  244 (367)
T ss_dssp             -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHHH
T ss_pred             cccccccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHH
Confidence            99765432    234679999999998876 68899999999999999999 89999965321        111111111


Q ss_pred             c-cC-ccccc---------------C--CccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 N-RG-FNGIV---------------D--PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ~-~~-~~~~~---------------~--~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . +. ..+..               .  +............+.+.+|+.+||+.||++|||+.|+++
T Consensus       245 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          245 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             HHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            0 00 00000               0  000000011122456889999999999999999999985


No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00  E-value=7.1e-43  Score=312.55  Aligned_cols=252  Identities=16%  Similarity=0.178  Sum_probs=194.5

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC----chhHHHHHHHHHHHHhcCCCceeeeeeeee--eCCc
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV----FDAYDCCFNNIVFASQMSHNNVLRLIGCCL--EVEI  132 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~--~~~~  132 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|+.....    ....+.+.+|+.++++++||||+++++++.  +...
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            457899999999999999999999 555555555554321    233467999999999999999999999984  4568


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .++||||++++ |.+++...   ....+++..+..++.|++.||.|||   +.+++||||||+||+++.++.+||+|||+
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~  155 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGV  155 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             EEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeecccc
Confidence            89999999975 87877653   3367999999999999999999999   99999999999999999999999999999


Q ss_pred             CccCCCCC-ceeeccccccCCcccccccccCC--CCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          213 SASIPEGE-TYIDDGVKGTSGIVAPEYARTGY--LNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       213 a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      +....... ........||+.|+|||++.+..  ++.++||||||+++|+|+ +|..||....        .........
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~-~g~~p~~~~~--------~~~~~~~i~  226 (305)
T 2wtk_C          156 AEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNIT-TGLYPFEGDN--------IYKLFENIG  226 (305)
T ss_dssp             CEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHH-HSSCSCCCSS--------HHHHHHHHH
T ss_pred             ccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHH-hCCCCCCCch--------HHHHHHHHh
Confidence            98765322 22234567999999999887643  478999999999999999 8999996422        112222222


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                       .+..      ...     ...+..+.+++.+||+.||.+|||+.|+++.
T Consensus       227 -~~~~------~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  264 (305)
T 2wtk_C          227 -KGSY------AIP-----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH  264 (305)
T ss_dssp             -HCCC------CCC-----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred             -cCCC------CCC-----CccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence             1111      011     1123467899999999999999999999863


No 221
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00  E-value=3.4e-43  Score=313.87  Aligned_cols=252  Identities=19%  Similarity=0.293  Sum_probs=188.2

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeee---------
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE---------  129 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------  129 (347)
                      ..++|+..+.||+|+||.||+|.. .++..+++|..... ....+.+.+|+.++++++||||+++++++.+         
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            456789999999999999999998 45555555544432 2344778999999999999999999998865         


Q ss_pred             ----CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCce
Q 045067          130 ----VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVP  205 (347)
Q Consensus       130 ----~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~  205 (347)
                          ....++||||+++|+|.+++...    ...+++..+..++.|++.||+|||   +.+++||||||+||+++.++.+
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~  155 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSE----NLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNV  155 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHS----CGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCE
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhcc----ccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCE
Confidence                35689999999999999999763    256888999999999999999999   9999999999999999999999


Q ss_pred             EEecCCCCccCCCCC-------------ceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccC
Q 045067          206 KLFNFSLSASIPEGE-------------TYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMG  271 (347)
Q Consensus       206 kl~Dfg~a~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~  271 (347)
                      ||+|||++.......             ........||+.|+|||.+.+. .++.++|||||||++|+|+ +   ||...
T Consensus       156 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~---p~~~~  231 (303)
T 1zy4_A          156 KIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI-Y---PFSTG  231 (303)
T ss_dssp             EECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHH-S---CCSSH
T ss_pred             EEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHH-h---ccCCc
Confidence            999999997764321             1112345689999999988764 7899999999999999999 5   44211


Q ss_pred             ccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          272 LRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                             ......... ......  ...+.     .....+..+.+++.+||+.||.+|||+.++++
T Consensus       232 -------~~~~~~~~~-~~~~~~--~~~~~-----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          232 -------MERVNILKK-LRSVSI--EFPPD-----FDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             -------HHHHHHHHH-HHSTTC--CCCTT-----CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -------hhHHHHHHh-cccccc--ccCcc-----ccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence                   001111111 111110  01111     11223456789999999999999999999986


No 222
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00  E-value=8.1e-44  Score=320.68  Aligned_cols=266  Identities=17%  Similarity=0.188  Sum_probs=200.7

Q ss_pred             CHHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCC
Q 045067           53 SAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVE  131 (347)
Q Consensus        53 ~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~  131 (347)
                      ...++....++|...+.||+|+||.||+|...+ .+++|++.... .....+.+.+|+.++++++||||+++++++.+.+
T Consensus        24 ~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~  102 (319)
T 2y4i_B           24 FLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP  102 (319)
T ss_dssp             CGGGSSSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS
T ss_pred             ccccccCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC
Confidence            334455557889999999999999999999854 45555544322 2223356789999999999999999999999999


Q ss_pred             ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          132 IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       132 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                      ..++||||+++++|.+++...    ...+++..+..++.|++.||.|||   +.+++||||||+||+++ ++.+||+|||
T Consensus       103 ~~~iv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~-~~~~~l~Dfg  174 (319)
T 2y4i_B          103 HLAIITSLCKGRTLYSVVRDA----KIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD-NGKVVITDFG  174 (319)
T ss_dssp             CEEEECBCCCSEEHHHHTTSS----CCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC---CCEECCCS
T ss_pred             ceEEEeecccCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEe-CCCEEEeecC
Confidence            999999999999999999763    246899999999999999999999   99999999999999998 6899999999


Q ss_pred             CCccCCCCCc----eeeccccccCCccccccccc---------CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCC
Q 045067          212 LSASIPEGET----YIDDGVKGTSGIVAPEYART---------GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDE  278 (347)
Q Consensus       212 ~a~~~~~~~~----~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~  278 (347)
                      ++........    .......||+.|+|||.+.+         ..++.++||||||+++|+|+ +|+.||.....     
T Consensus       175 ~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~-~g~~p~~~~~~-----  248 (319)
T 2y4i_B          175 LFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH-AREWPFKTQPA-----  248 (319)
T ss_dssp             CCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH-HSSCSSSSCCH-----
T ss_pred             CccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH-hCCCCCCCCCH-----
Confidence            9876532111    11233568999999998864         45789999999999999999 89999964321     


Q ss_pred             chHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHHh
Q 045067          279 SFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                         ...... ...+........         ..+.++.+++.+||+.||++|||+.++++.|+++.+.
T Consensus       249 ---~~~~~~-~~~~~~~~~~~~---------~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~  303 (319)
T 2y4i_B          249 ---EAIIWQ-MGTGMKPNLSQI---------GMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKR  303 (319)
T ss_dssp             ---HHHHHH-HHTTCCCCCCCS---------SCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC---
T ss_pred             ---HHHHHH-hccCCCCCCCcC---------CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHh
Confidence               111111 222211111111         1123577999999999999999999999999987653


No 223
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00  E-value=7.3e-43  Score=316.62  Aligned_cols=267  Identities=17%  Similarity=0.196  Sum_probs=202.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe--CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCc------eeeeeeeeeeCCc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL--PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNN------VLRLIGCCLEVEI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  132 (347)
                      .++|...+.||+|+||.||+|..  .++..+++|+..... ...+.+.+|+.+++.++|++      ++++++++.+.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence            45788999999999999999987  356666666665432 33477889999999987665      9999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC-----------
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE-----------  201 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~-----------  201 (347)
                      .++||||+ +++|.+++...   ....+++..+..++.|++.||+|||   +.+|+||||||+|||++.           
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~  164 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKEN---GFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKI  164 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC---
T ss_pred             EEEEEcCC-CCCHHHHHHhc---CCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCcc
Confidence            99999999 78999999764   2246899999999999999999999   999999999999999987           


Q ss_pred             --------CCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCcc
Q 045067          202 --------RYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLR  273 (347)
Q Consensus       202 --------~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~  273 (347)
                              ++.+||+|||++.......    ....||+.|+|||++.+..++.++|||||||++|||+ +|..||.....
T Consensus       165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~  239 (339)
T 1z57_A          165 KRDERTLINPDIKVVDFGSATYDDEHH----STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYY-LGFTVFPTHDS  239 (339)
T ss_dssp             -CEEEEESCCCEEECCCSSCEETTSCC----CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHH-HSSCSCCCSCH
T ss_pred             ccccccccCCCceEeeCcccccCcccc----ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHH-hCCCCCCCCCh
Confidence                    6789999999997654322    3457899999999999989999999999999999999 99999964321


Q ss_pred             CCCCCchHHHHHHHHHhcc--------Ccccc---------------------cCCccCCchhhHHHHHHHHHHHHHhcc
Q 045067          274 LNGDESFEMDFVKKYIENR--------GFNGI---------------------VDPRIIGDELLEHKLQSSFELAFQCQS  324 (347)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~--------~~~~~---------------------~~~~~~~~~~~~~~~~~~~~l~~~cl~  324 (347)
                           ..............        .....                     ..+...........++.+.+++.+||+
T Consensus       240 -----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  314 (339)
T 1z57_A          240 -----KEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLE  314 (339)
T ss_dssp             -----HHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred             -----HHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhC
Confidence                 11111111111000        00000                     000000001112346678999999999


Q ss_pred             CCCCCCCCHHHHHHH--HHHHHH
Q 045067          325 ASAEDRPTMIDVAKQ--IKKMYK  345 (347)
Q Consensus       325 ~~P~~RPs~~ell~~--L~~i~~  345 (347)
                      .||++|||+.|+++.  ++++.+
T Consensus       315 ~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          315 YDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             SSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             cCcccccCHHHHhcCHHHHHHhc
Confidence            999999999999853  554443


No 224
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00  E-value=2.3e-43  Score=317.58  Aligned_cols=259  Identities=18%  Similarity=0.205  Sum_probs=189.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeee-----------
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCL-----------  128 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~-----------  128 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|.+........+.+.+|+.++++++||||+++++++.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~   89 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG   89 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred             CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence            46788899999999999999999 445555555555545555678999999999999999999998873           


Q ss_pred             ---eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC-CCCc
Q 045067          129 ---EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS-ERYV  204 (347)
Q Consensus       129 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~-~~~~  204 (347)
                         +....++||||++ |+|.+++..      ..+++..+..++.|++.||+|||   +.+|+||||||+||+++ .++.
T Consensus        90 ~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~  159 (320)
T 2i6l_A           90 SLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLV  159 (320)
T ss_dssp             -CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTE
T ss_pred             cccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCe
Confidence               3467899999998 599999965      57999999999999999999999   99999999999999997 5679


Q ss_pred             eEEecCCCCccCCCCCc--eeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchH
Q 045067          205 PKLFNFSLSASIPEGET--YIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFE  281 (347)
Q Consensus       205 ~kl~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~  281 (347)
                      +||+|||++........  .......+|+.|+|||.+.+ ..++.++|||||||++|+|+ +|+.||.....        
T Consensus       160 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~--------  230 (320)
T 2i6l_A          160 LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML-TGKTLFAGAHE--------  230 (320)
T ss_dssp             EEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHH-HSSCSSCCSSH--------
T ss_pred             EEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHH-hCCCCCCCCCH--------
Confidence            99999999987643221  11234567999999997765 68899999999999999999 89999974321        


Q ss_pred             HHHHHHHHhccCc-------------c-----cccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          282 MDFVKKYIENRGF-------------N-----GIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       282 ~~~~~~~~~~~~~-------------~-----~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .............             .     ....+...........+.++.+++.+||+.||++|||+.|+++
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          231 LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence            1111111111000             0     0000000000111223567889999999999999999999986


No 225
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00  E-value=5.6e-43  Score=327.01  Aligned_cols=256  Identities=19%  Similarity=0.225  Sum_probs=190.6

Q ss_pred             ccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeC------Ccc
Q 045067           62 NNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEV------EIP  133 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~------~~~  133 (347)
                      ..|...+.||+|+||.||+|.+ . +..+|+|++....     ....+|+.++++++||||+++++++...      ..+
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~  128 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL  128 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred             ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence            4688899999999999999999 4 4556666654432     2234799999999999999999988542      236


Q ss_pred             EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC-CceEEecCCC
Q 045067          134 VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER-YVPKLFNFSL  212 (347)
Q Consensus       134 ~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~-~~~kl~Dfg~  212 (347)
                      ++||||+++ +|.+.+... ......+++..+..++.|++.||.|||   +.+|+||||||+|||++.+ +.+||+|||+
T Consensus       129 ~lv~e~~~~-~l~~~~~~~-~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~  203 (420)
T 1j1b_A          129 NLVLDYVPE-TVYRVARHY-SRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGS  203 (420)
T ss_dssp             EEEEECCCE-EHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             Eeehhcccc-cHHHHHHHH-hhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchh
Confidence            799999986 777766532 112367999999999999999999999   9999999999999999965 5789999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh-
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE-  290 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-  290 (347)
                      ++.......  .....||+.|+|||++.+. .++.++|||||||++|||+ +|++||.....        ...+....+ 
T Consensus       204 a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~G~~pf~~~~~--------~~~l~~i~~~  272 (420)
T 1j1b_A          204 AKQLVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSG--------VDQLVEIIKV  272 (420)
T ss_dssp             CEECCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHHH
T ss_pred             hhhcccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHHH
Confidence            987654332  2346789999999988764 7899999999999999999 89999975321        111111111 


Q ss_pred             ------------ccCcccccCCccCCch----hhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 ------------NRGFNGIVDPRIIGDE----LLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                                  ...+.+...+.+....    .....+.++.+|+.+||+.||.+|||+.|+++
T Consensus       273 lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          273 LGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             HCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence                        1111111111111110    01122457899999999999999999999985


No 226
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00  E-value=1e-43  Score=323.94  Aligned_cols=260  Identities=17%  Similarity=0.250  Sum_probs=199.3

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCc----------------hhHHHHHHHHHHHHhcCCCceeeee
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVF----------------DAYDCCFNNIVFASQMSHNNVLRLI  124 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~----------------~~~~~~~~E~~~l~~l~h~niv~l~  124 (347)
                      .++|...+.||+|+||.||+|..++..+++|.+......                ...+.+.+|+.++++++||||++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~  109 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE  109 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred             cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence            467999999999999999999995555555554332111                0117799999999999999999999


Q ss_pred             eeeeeCCccEEEEEeCCCCCHHHH------HhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCC-CCeEeccCCCCCe
Q 045067          125 GCCLEVEIPVLVFESAEYGNLHDL------LKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFS-RPIVFRDLKSSYI  197 (347)
Q Consensus       125 ~~~~~~~~~~lv~e~~~~g~L~~~------l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~-~~ivH~dlkp~Ni  197 (347)
                      +++.+++..++||||+++|+|.++      +...   ....+++..+..++.|++.||.|||   + .+++||||||+||
T Consensus       110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~~i~H~dl~p~Ni  183 (348)
T 2pml_X          110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN---YTCFIPIQVIKCIIKSVLNSFSYIH---NEKNICHRDVKPSNI  183 (348)
T ss_dssp             EEEESSSEEEEEEECCTTCBSSEESSSEESSCSS---SCCCCCHHHHHHHHHHHHHHHHHHH---HTSCEECCCCCGGGE
T ss_pred             EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc---cccCCCHHHHHHHHHHHHHHHHHHh---ccCCEeecCCChHhE
Confidence            999999999999999999999998      5431   2467999999999999999999999   7 9999999999999


Q ss_pred             EECCCCceEEecCCCCccCCCCCceeeccccccCCcccccccccC-CCCC-ccchHHHHHHHHHHHhcCCCccccCccCC
Q 045067          198 LVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNE-KCDVYSFGLLLLQLLSTGEDLFNMGLRLN  275 (347)
Q Consensus       198 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~G~~l~el~~~g~~p~~~~~~~~  275 (347)
                      +++.++.+||+|||++......   ......||+.|+|||.+.+. .++. ++|||||||++|+|+ +|..||.....  
T Consensus       184 l~~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~--  257 (348)
T 2pml_X          184 LMDKNGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF-YNVVPFSLKIS--  257 (348)
T ss_dssp             EECTTSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHH-HSSCSSCCSSC--
T ss_pred             EEcCCCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHH-hCCCCCCCCCc--
Confidence            9999999999999999775433   23456799999999998877 6666 999999999999999 89999974322  


Q ss_pred             CCCchHHHHHHHHHhccCcccccC------CccC--CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          276 GDESFEMDFVKKYIENRGFNGIVD------PRII--GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                           ........ ..+...-..+      +...  ........+..+.+++.+||+.||.+|||+.|+++
T Consensus       258 -----~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          258 -----LVELFNNI-RTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             -----SHHHHHHH-TSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             -----HHHHHHHH-hccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence                 11222222 1111110000      0000  00001223457889999999999999999999986


No 227
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00  E-value=9.8e-44  Score=327.10  Aligned_cols=254  Identities=7%  Similarity=-0.045  Sum_probs=176.5

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhc--CCCceeeee-------eee
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQM--SHNNVLRLI-------GCC  127 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~l~-------~~~  127 (347)
                      ..+|...+.||+|+||+||+|.+ .++..+++|.+....   ....+.+.+|+.+++.+  +||||++++       +++
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~  140 (371)
T 3q60_A           61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV  140 (371)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred             ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence            45688899999999999999998 455555555444432   23345677885555444  699988754       343


Q ss_pred             eeC-----------------CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHH------HHHHHHHHHHHHHhhcCCC
Q 045067          128 LEV-----------------EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHR------LKIAMEIANVFAYLHIGFS  184 (347)
Q Consensus       128 ~~~-----------------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~------~~i~~~i~~~l~~lH~~~~  184 (347)
                      ...                 ...++||||++ |+|.+++....    ..+++..+      ..++.|++.||+|||   +
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~  212 (371)
T 3q60_A          141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQ---S  212 (371)
T ss_dssp             EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHH---H
T ss_pred             ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHH---H
Confidence            332                 33799999999 79999998641    33455555      677899999999999   9


Q ss_pred             CCeEeccCCCCCeEECCCCceEEecCCCCccCCCCCceeeccccccCCccccccccc--CCCCCccchHHHHHHHHHHHh
Q 045067          185 RPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYART--GYLNEKCDVYSFGLLLLQLLS  262 (347)
Q Consensus       185 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~~  262 (347)
                      .+|+||||||+|||++.++.+||+|||+++.....    .....+|+.|+|||++.+  ..++.++|||||||++|||+ 
T Consensus       213 ~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~ell-  287 (371)
T 3q60_A          213 KGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW-  287 (371)
T ss_dssp             TTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHH-
T ss_pred             CCCccCcCCHHHEEECCCCCEEEEecceeeecCCC----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHH-
Confidence            99999999999999999999999999999866432    113457799999999987  68999999999999999999 


Q ss_pred             cCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          263 TGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       263 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      +|+.||..........          +............... ......++.+.+++.+||+.||++|||+.++++
T Consensus       288 tg~~Pf~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          288 CLFLPFGLVTPGIKGS----------WKRPSLRVPGTDSLAF-GSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HSSCSTTBCCTTCTTC----------CCBCCTTSCCCCSCCC-TTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             hCCCCCCCcCcccccc----------hhhhhhhhccccccch-hhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            8999997653211000          0000000000001000 011133567889999999999999999999975


No 228
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00  E-value=9.5e-43  Score=309.26  Aligned_cols=253  Identities=21%  Similarity=0.255  Sum_probs=199.7

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccE
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      ....++|...+.||+|+||.||+|.. .++..+++|+....  .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus        18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence            45567899999999999999999999 44544455544322  1234477899999999999999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC---CceEEecCC
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER---YVPKLFNFS  211 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~---~~~kl~Dfg  211 (347)
                      +|+||+++++|.+.+...     ..+++..+..++.|++.||.|||   +.+++||||||+||+++.+   +.+||+|||
T Consensus        98 lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg  169 (287)
T 2wei_A           98 IVGELYTGGELFDEIIKR-----KRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFG  169 (287)
T ss_dssp             EEECCCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred             EEEEccCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccC
Confidence            999999999999998765     57999999999999999999999   9999999999999999754   479999999


Q ss_pred             CCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhc
Q 045067          212 LSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIEN  291 (347)
Q Consensus       212 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  291 (347)
                      ++........  .....+|+.|+|||.+.+. ++.++||||||+++|+|+ +|..||.....        ......... 
T Consensus       170 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~-~g~~p~~~~~~--------~~~~~~~~~-  236 (287)
T 2wei_A          170 LSTCFQQNTK--MKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILL-SGTPPFYGKNE--------YDILKRVET-  236 (287)
T ss_dssp             GGGTBCCCSS--CSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HHHHHHHHH-
T ss_pred             cceeecCCCc--cccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHc-
Confidence            9876654322  2334689999999988764 899999999999999999 89999864321        122222222 


Q ss_pred             cCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          292 RGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      +....  +  .   ......+..+.+++.+||+.||++|||+.|+++
T Consensus       237 ~~~~~--~--~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          237 GKYAF--D--L---PQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             CCCCC--C--S---GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCC--C--c---hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            21110  0  0   011123456889999999999999999999997


No 229
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00  E-value=5.1e-43  Score=326.04  Aligned_cols=271  Identities=20%  Similarity=0.204  Sum_probs=179.9

Q ss_pred             hccCCC-CCeecccCceEEEEEEeC---CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeee--CCccE
Q 045067           61 TNNYHY-RNIITESSIFRLCQGVLP---DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE--VEIPV  134 (347)
Q Consensus        61 ~~~~~~-~~~lg~G~~g~Vy~~~~~---~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~~~  134 (347)
                      .+.|.. .++||+|+||+||+|.+.   ++..+++|.+....  ....+.+|+.++++++||||+++++++..  +...+
T Consensus        19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   96 (405)
T 3rgf_A           19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVW   96 (405)
T ss_dssp             HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred             hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence            344554 458999999999999972   34445555544332  22568899999999999999999999964  66899


Q ss_pred             EEEEeCCCCCHHHHHhhhcc----CCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE----CCCCceE
Q 045067          135 LVFESAEYGNLHDLLKRSYQ----SHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV----SERYVPK  206 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~----~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill----~~~~~~k  206 (347)
                      +||||+.+ +|.+++.....    .....+++..+..++.|++.||.|||   +.+|+||||||+|||+    +.++.+|
T Consensus        97 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~k  172 (405)
T 3rgf_A           97 LLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVK  172 (405)
T ss_dssp             EEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEE
T ss_pred             EEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEE
Confidence            99999985 88888764211    11235999999999999999999999   9999999999999999    7789999


Q ss_pred             EecCCCCccCCCCCc--eeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCC-CCCchHH
Q 045067          207 LFNFSLSASIPEGET--YIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLN-GDESFEM  282 (347)
Q Consensus       207 l~Dfg~a~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~-~~~~~~~  282 (347)
                      |+|||+++.......  .......||+.|+|||++.+ ..++.++|||||||++|+|+ +|++||....... .......
T Consensus       173 l~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell-~g~~pf~~~~~~~~~~~~~~~  251 (405)
T 3rgf_A          173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL-TSEPIFHCRQEDIKTSNPYHH  251 (405)
T ss_dssp             ECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHH-HSSCTTCCCC------CCCCH
T ss_pred             EEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHH-hCCCCCCCccccccccccchH
Confidence            999999987653321  12234679999999998877 46899999999999999999 9999996543210 0111111


Q ss_pred             HHHHHHHhccCcc--cccC-----------------CccCCchhhH-------HHHHHHHHHHHHhccCCCCCCCCHHHH
Q 045067          283 DFVKKYIENRGFN--GIVD-----------------PRIIGDELLE-------HKLQSSFELAFQCQSASAEDRPTMIDV  336 (347)
Q Consensus       283 ~~~~~~~~~~~~~--~~~~-----------------~~~~~~~~~~-------~~~~~~~~l~~~cl~~~P~~RPs~~el  336 (347)
                      ..+..........  ..+.                 ..........       .....+.+|+.+||+.||++|||+.|+
T Consensus       252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~  331 (405)
T 3rgf_A          252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA  331 (405)
T ss_dssp             HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred             HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence            2222222110000  0000                 0000000000       003467899999999999999999999


Q ss_pred             HH
Q 045067          337 AK  338 (347)
Q Consensus       337 l~  338 (347)
                      ++
T Consensus       332 L~  333 (405)
T 3rgf_A          332 MQ  333 (405)
T ss_dssp             HT
T ss_pred             hc
Confidence            86


No 230
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00  E-value=4.2e-43  Score=317.30  Aligned_cols=257  Identities=16%  Similarity=0.176  Sum_probs=175.8

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCce-EEEEEEccCCCchhHHHHHHHHH-HHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRT-ISVVKFIDGSVFDAYDCCFNNIV-FASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~-~~v~k~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .++|...+.||+|+||.||+|.. .++. +++|++...........+.+|+. +++.++||||+++++++.+++..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~  100 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM  100 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence            46788999999999999999999 4455 44444444333334455666666 667789999999999999999999999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR-PIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      ||+++ +|.+++..........+++..+..++.+++.||.|||   +. +|+||||||+||+++.++.+||+|||++...
T Consensus       101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLK---ENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQL  176 (327)
T ss_dssp             CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHH---HHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-
T ss_pred             eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHh---ccCCEeECCCCHHHEEEcCCCCEEEccCCCceec
Confidence            99985 8888876432223467999999999999999999999   87 9999999999999999999999999999776


Q ss_pred             CCCCceeeccccccCCccccccc----ccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYA----RTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      .....  .....||+.|+|||.+    .+..++.++|||||||++|+|+ +|+.||......       ..    .... 
T Consensus       177 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~-------~~----~~~~-  241 (327)
T 3aln_A          177 VDSIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA-TGRFPYPKWNSV-------FD----QLTQ-  241 (327)
T ss_dssp             -------------------------------CCSHHHHHHHHHHHHHHH-HSCCCSSCC------------------CC-
T ss_pred             ccccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHH-HCCCCCCCcchH-------HH----HHHH-
Confidence            44322  2234689999999988    4567899999999999999999 899999643210       00    0000 


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                       ......+.+.. ......+..+.+++.+||+.||++|||+.++++
T Consensus       242 -~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          242 -VVKGDPPQLSN-SEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             -CCCSCCCCCCC-CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -HhcCCCCCCCC-cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence             00000011110 001123456889999999999999999999976


No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00  E-value=2.5e-42  Score=317.67  Aligned_cols=255  Identities=18%  Similarity=0.224  Sum_probs=191.4

Q ss_pred             HhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCC--CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCcc---
Q 045067           60 ATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIP---  133 (347)
Q Consensus        60 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---  133 (347)
                      ..++|...+.||+|+||.||+|.. .++..+++|.+...  .....+.+.+|+.+++.++||||+++++++...+..   
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~  119 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF  119 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence            356788999999999999999998 44544444444432  223356788999999999999999999999877655   


Q ss_pred             ---EEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecC
Q 045067          134 ---VLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNF  210 (347)
Q Consensus       134 ---~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Df  210 (347)
                         ++||||+. ++|.+.+.       ..+++..+..++.|++.||+|||   +.+|+||||||+|||++.++.+||+||
T Consensus       120 ~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Df  188 (371)
T 4exu_A          120 YDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDF  188 (371)
T ss_dssp             CCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECST
T ss_pred             eeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEec
Confidence               99999998 58988874       35999999999999999999999   999999999999999999999999999


Q ss_pred             CCCccCCCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          211 SLSASIPEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       211 g~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      |+++.....    .....||+.|+|||++.+ ..++.++|||||||++|+|+ +|+.||.....        ........
T Consensus       189 g~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~--------~~~~~~i~  255 (371)
T 4exu_A          189 GLARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML-TGKTLFKGKDY--------LDQLTQIL  255 (371)
T ss_dssp             TCC------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHHHHH
T ss_pred             CcccccccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHH-hCCCCCCCCCh--------HHHHHHHH
Confidence            999765432    234678999999998877 68899999999999999999 89999964321        11111111


Q ss_pred             hcc-Cc-ccc----------------cC-CccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          290 ENR-GF-NGI----------------VD-PRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       290 ~~~-~~-~~~----------------~~-~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ... .. .+.                .. +........+..++.+.+|+.+||+.||++|||+.|+++
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          256 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             HHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            100 00 000                00 000000011123567899999999999999999999975


No 232
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00  E-value=6.2e-42  Score=316.29  Aligned_cols=203  Identities=21%  Similarity=0.261  Sum_probs=169.9

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CC-----ceeeeeeeeeeC
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HN-----NVLRLIGCCLEV  130 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~  130 (347)
                      ....++|...+.||+|+||+||+|.. .++..+++|++.... ...+.+.+|+.+++.++ |+     +++++++++...
T Consensus        50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  128 (382)
T 2vx3_A           50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR  128 (382)
T ss_dssp             CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred             CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence            44567899999999999999999998 556666666665432 33466788999998885 44     499999999999


Q ss_pred             CccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC--CCCceEEe
Q 045067          131 EIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS--ERYVPKLF  208 (347)
Q Consensus       131 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~--~~~~~kl~  208 (347)
                      +..++||||++ |+|.+++...   ....+++..+..++.|++.||.|||+. +.+|+||||||+|||++  .++.+||+
T Consensus       129 ~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~  203 (382)
T 2vx3_A          129 NHLCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIV  203 (382)
T ss_dssp             TEEEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEEC
T ss_pred             CceEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEE
Confidence            99999999997 5999999864   224689999999999999999999932 36899999999999995  57889999


Q ss_pred             cCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccC
Q 045067          209 NFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMG  271 (347)
Q Consensus       209 Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~  271 (347)
                      |||+++......    ....||+.|+|||++.+..++.++|||||||++|||+ +|++||...
T Consensus       204 DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell-tg~~pf~~~  261 (382)
T 2vx3_A          204 DFGSSCQLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMH-TGEPLFSGA  261 (382)
T ss_dssp             CCTTCEETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSSCCS
T ss_pred             eccCceeccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHH-hCCCCCCCC
Confidence            999998764322    3467899999999999999999999999999999999 899999753


No 233
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00  E-value=3.1e-42  Score=314.57  Aligned_cols=260  Identities=15%  Similarity=0.168  Sum_probs=197.0

Q ss_pred             hccCCCCCeecccCceEEEEEEe--CCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCc------eeeeeeeeeeCCc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL--PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNN------VLRLIGCCLEVEI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~  132 (347)
                      .++|...+.||+|+||+||+|..  .++..+++|+..... ...+.+.+|+.++++++|++      ++.+.+++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence            46799999999999999999998  344666777665443 33467889999999998766      8999999999999


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE-------------
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV-------------  199 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill-------------  199 (347)
                      .++||||+. ++|.+.+...   ....+++..+..++.|++.||.|||   +.+|+||||||+|||+             
T Consensus        97 ~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~  169 (355)
T 2eu9_A           97 MCIAFELLG-KNTFEFLKEN---NFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHK  169 (355)
T ss_dssp             EEEEEECCC-CBHHHHHHHT---TTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred             EEEEEeccC-CChHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecccccccccccc
Confidence            999999995 6777777653   2346999999999999999999999   9999999999999999             


Q ss_pred             ------CCCCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCcc
Q 045067          200 ------SERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLR  273 (347)
Q Consensus       200 ------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~  273 (347)
                            +.++.+||+|||++.......    ....||+.|+|||++.+..++.++|||||||++|||+ +|..||.....
T Consensus       170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~  244 (355)
T 2eu9_A          170 SCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYY-RGFTLFQTHEN  244 (355)
T ss_dssp             CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH
T ss_pred             cccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHH-hCCCCCCCCCH
Confidence                  567899999999997654322    3457999999999999999999999999999999999 89999964321


Q ss_pred             CCCCCchHHHHHHHHHhc--------cCcccc-cCCcc--------------------CCchhhHHHHHHHHHHHHHhcc
Q 045067          274 LNGDESFEMDFVKKYIEN--------RGFNGI-VDPRI--------------------IGDELLEHKLQSSFELAFQCQS  324 (347)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~--------------------~~~~~~~~~~~~~~~l~~~cl~  324 (347)
                           .............        ...... .....                    ...........++.+++.+||+
T Consensus       245 -----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~  319 (355)
T 2eu9_A          245 -----REHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLE  319 (355)
T ss_dssp             -----HHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTC
T ss_pred             -----HHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhc
Confidence                 0011111111100        000000 00000                    0000112335578899999999


Q ss_pred             CCCCCCCCHHHHHH
Q 045067          325 ASAEDRPTMIDVAK  338 (347)
Q Consensus       325 ~~P~~RPs~~ell~  338 (347)
                      .||++|||+.|+++
T Consensus       320 ~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          320 FDPAQRITLAEALL  333 (355)
T ss_dssp             SSTTTSCCHHHHTT
T ss_pred             CChhhCcCHHHHhc
Confidence            99999999999974


No 234
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00  E-value=1.6e-42  Score=313.12  Aligned_cols=262  Identities=18%  Similarity=0.216  Sum_probs=197.3

Q ss_pred             HHhccCCCCCeecccCceEEEEEEe--CCceEEEEEEccCCC--chhHHHHHHHHHHHHhc---CCCceeeeeeeee---
Q 045067           59 RATNNYHYRNIITESSIFRLCQGVL--PDRTISVVKFIDGSV--FDAYDCCFNNIVFASQM---SHNNVLRLIGCCL---  128 (347)
Q Consensus        59 ~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~---  128 (347)
                      ...++|...+.||+|+||.||+|..  .++..+++|......  ......+.+|+.+++.+   +||||+++++++.   
T Consensus         8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~   87 (326)
T 1blx_A            8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   87 (326)
T ss_dssp             CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred             CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence            3457899999999999999999998  455555555443221  11224577888888776   8999999999987   


Q ss_pred             --eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceE
Q 045067          129 --EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPK  206 (347)
Q Consensus       129 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~k  206 (347)
                        .....++||||+. |+|.+++...   ....+++..+..++.|++.||.|||   +.||+||||||+||+++.++.+|
T Consensus        88 ~~~~~~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~k  160 (326)
T 1blx_A           88 TDRETKLTLVFEHVD-QDLTTYLDKV---PEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIK  160 (326)
T ss_dssp             CSSEEEEEEEEECCS-CBHHHHHHHS---CTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEE
T ss_pred             cCCCceEEEEEecCC-CCHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEE
Confidence              4567899999998 5999999764   2345999999999999999999999   99999999999999999999999


Q ss_pred             EecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHH
Q 045067          207 LFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVK  286 (347)
Q Consensus       207 l~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~  286 (347)
                      |+|||++.......  ......||+.|+|||++.+..++.++|||||||++|+|+ +|++||.....        .....
T Consensus       161 l~Dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~--------~~~~~  229 (326)
T 1blx_A          161 LADFGLARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF-RRKPLFRGSSD--------VDQLG  229 (326)
T ss_dssp             ECSCCSCCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH-HSSCSCCCSSH--------HHHHH
T ss_pred             EecCcccccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHH-cCCCCCCCCCH--------HHHHH
Confidence            99999997654322  223467899999999999889999999999999999999 99999964321        11122


Q ss_pred             HHHhcc------Ccccc-------cCCc--cCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          287 KYIENR------GFNGI-------VDPR--IIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       287 ~~~~~~------~~~~~-------~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ......      .+...       +...  ..........+..+.+++.+||+.||++|||+.|+++
T Consensus       230 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          230 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             HHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            221110      00000       0000  0000111233557889999999999999999999984


No 235
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00  E-value=7.8e-43  Score=321.00  Aligned_cols=263  Identities=16%  Similarity=0.168  Sum_probs=195.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-----------CCceeeeeeeee
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-----------HNNVLRLIGCCL  128 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~  128 (347)
                      .++|...+.||+|+||+||+|.. .++..+++|+..... ...+.+.+|+.++++++           ||||+++++++.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~   96 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   96 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence            35788999999999999999998 556666666665433 23467889999999886           899999999988


Q ss_pred             eCC----ccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEEC---
Q 045067          129 EVE----IPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR-PIVFRDLKSSYILVS---  200 (347)
Q Consensus       129 ~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlkp~Nill~---  200 (347)
                      ..+    ..++||||+ +++|.+++...   ....+++..+..++.|++.||.|||   +. +|+||||||+|||++   
T Consensus        97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH---~~~~ivH~Dikp~NIll~~~~  169 (373)
T 1q8y_A           97 HKGPNGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMH---RRCGIIHTDIKPENVLMEIVD  169 (373)
T ss_dssp             EEETTEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHH---HTTCEECSCCSGGGEEEEEEE
T ss_pred             ccCCCCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHH---hcCCEEecCCChHHeEEeccC
Confidence            654    789999999 78999999864   2356999999999999999999999   87 999999999999994   


Q ss_pred             ---CCCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCC
Q 045067          201 ---ERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGD  277 (347)
Q Consensus       201 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~  277 (347)
                         ..+.+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|||+ +|+.||........ 
T Consensus       170 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~~~~-  243 (373)
T 1q8y_A          170 SPENLIQIKIADLGNACWYDEH----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI-TGDFLFEPDEGHSY-  243 (373)
T ss_dssp             TTTTEEEEEECCCTTCEETTBC----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHH-HSSCCC---------
T ss_pred             CCcCcceEEEcccccccccCCC----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHH-hCCCCCCCCccccc-
Confidence               4458999999999776432    22357899999999999999999999999999999999 89999975432111 


Q ss_pred             CchHHHHHHHHHh-ccCc---------------------ccccCCccC--------CchhhHHHHHHHHHHHHHhccCCC
Q 045067          278 ESFEMDFVKKYIE-NRGF---------------------NGIVDPRII--------GDELLEHKLQSSFELAFQCQSASA  327 (347)
Q Consensus       278 ~~~~~~~~~~~~~-~~~~---------------------~~~~~~~~~--------~~~~~~~~~~~~~~l~~~cl~~~P  327 (347)
                       ............ .+..                     ..+......        ........+.++.+|+.+||+.||
T Consensus       244 -~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  322 (373)
T 1q8y_A          244 -TKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDP  322 (373)
T ss_dssp             --CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSST
T ss_pred             -CChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCc
Confidence             001111111111 0000                     000000000        001223556789999999999999


Q ss_pred             CCCCCHHHHHH
Q 045067          328 EDRPTMIDVAK  338 (347)
Q Consensus       328 ~~RPs~~ell~  338 (347)
                      ++|||+.|+++
T Consensus       323 ~~Rpt~~ell~  333 (373)
T 1q8y_A          323 RKRADAGGLVN  333 (373)
T ss_dssp             TTCBCHHHHHT
T ss_pred             cccCCHHHHhh
Confidence            99999999986


No 236
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00  E-value=3.6e-42  Score=309.33  Aligned_cols=260  Identities=17%  Similarity=0.247  Sum_probs=194.4

Q ss_pred             cCHHHHHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCC--CchhHHHHHHHHHHHHhcC--CCceeeeeeee
Q 045067           52 FSAKELERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGS--VFDAYDCCFNNIVFASQMS--HNNVLRLIGCC  127 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~  127 (347)
                      +.+..+....++|...+.||+|+||.||+|...++..+++|.....  .....+.+.+|+.++.+++  ||||+++++++
T Consensus        18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~   97 (313)
T 3cek_A           18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE   97 (313)
T ss_dssp             --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred             CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence            4444555566789999999999999999999954554555544332  2334577899999999997  59999999999


Q ss_pred             eeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEE
Q 045067          128 LEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKL  207 (347)
Q Consensus       128 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl  207 (347)
                      .+++..++||| +.+++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++ ++.+||
T Consensus        98 ~~~~~~~lv~e-~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~-~~~~kL  167 (313)
T 3cek_A           98 ITDQYIYMVME-CGNIDLNSWLKKK-----KSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIV-DGMLKL  167 (313)
T ss_dssp             ECSSEEEEEEC-CCSEEHHHHHHHC-----SSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEE-TTEEEE
T ss_pred             ecCCEEEEEEe-cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEE-CCeEEE
Confidence            99999999999 5567999999874     67899999999999999999999   99999999999999996 489999


Q ss_pred             ecCCCCccCCCCCce-eeccccccCCccccccccc-----------CCCCCccchHHHHHHHHHHHhcCCCccccCccCC
Q 045067          208 FNFSLSASIPEGETY-IDDGVKGTSGIVAPEYART-----------GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLN  275 (347)
Q Consensus       208 ~Dfg~a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~  275 (347)
                      +|||++......... ......||+.|+|||.+.+           ..++.++||||||+++|+|+ +|..||.....  
T Consensus       168 ~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~--  244 (313)
T 3cek_A          168 IDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT-YGKTPFQQIIN--  244 (313)
T ss_dssp             CCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHH-HSSCTTTTCCS--
T ss_pred             eeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHH-hCCCchhhHHH--
Confidence            999999876543321 1234578999999998865           47888999999999999999 99999964321  


Q ss_pred             CCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHH
Q 045067          276 GDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQ  339 (347)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~  339 (347)
                           ...............     ...     ...+..+.+++.+||+.||++|||+.|+++.
T Consensus       245 -----~~~~~~~~~~~~~~~-----~~~-----~~~~~~l~~li~~~l~~dp~~Rps~~ell~h  293 (313)
T 3cek_A          245 -----QISKLHAIIDPNHEI-----EFP-----DIPEKDLQDVLKCCLKRDPKQRISIPELLAH  293 (313)
T ss_dssp             -----HHHHHHHHHCTTSCC-----CCC-----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred             -----HHHHHHHHHhccccc-----CCc-----ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence                 111222222111100     000     0113467899999999999999999999863


No 237
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00  E-value=3.1e-42  Score=315.62  Aligned_cols=268  Identities=13%  Similarity=0.147  Sum_probs=186.8

Q ss_pred             HHHHHHhccCCCCCeecccCceEEEEEEe-C-CceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc
Q 045067           55 KELERATNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI  132 (347)
Q Consensus        55 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~  132 (347)
                      .+.....++|...+.||+|+||+||+|.. . +..+|+|++.....  ......+++..+..++||||+++++++.....
T Consensus        16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~   93 (360)
T 3e3p_A           16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR--FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE   93 (360)
T ss_dssp             HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT--CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred             hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc--ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence            45677788999999999999999999998 4 44555555543322  22556788888999999999999999876443


Q ss_pred             -------cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC-CCc
Q 045067          133 -------PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE-RYV  204 (347)
Q Consensus       133 -------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~-~~~  204 (347)
                             .++||||+++ +|.+.+... ......+++..+..++.|++.||.|||.. +.+|+||||||+|||++. ++.
T Consensus        94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~  170 (360)
T 3e3p_A           94 RDRRDIYLNVVMEYVPD-TLHRCCRNY-YRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGT  170 (360)
T ss_dssp             SCTTCEEEEEEEECCSC-BHHHHHHHH-HTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTE
T ss_pred             ccccceeEEEEeecccc-cHHHHHHHH-hhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCc
Confidence                   7899999986 666555432 11336789999999999999999999943 578999999999999996 899


Q ss_pred             eEEecCCCCccCCCCCceeeccccccCCcccccccccC-CCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHH
Q 045067          205 PKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTG-YLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMD  283 (347)
Q Consensus       205 ~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  283 (347)
                      +||+|||++........  .....||+.|+|||++.+. .++.++|||||||++|+|+ +|++||.....        ..
T Consensus       171 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell-~g~~pf~~~~~--------~~  239 (360)
T 3e3p_A          171 LKLCDFGSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM-LGEPIFRGDNS--------AG  239 (360)
T ss_dssp             EEECCCTTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH-HSSCSSCCSSH--------HH
T ss_pred             EEEeeCCCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHH-hCCCCcCCCCh--------HH
Confidence            99999999987654332  2345789999999988654 5899999999999999999 89999975321        11


Q ss_pred             HHHHHHhc---------------cCcccccCC-ccCCc----hhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          284 FVKKYIEN---------------RGFNGIVDP-RIIGD----ELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       284 ~~~~~~~~---------------~~~~~~~~~-~~~~~----~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ........               .......+. .....    ......+.++.+++.+||+.||.+|||+.|+++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          240 QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            11111110               000000000 00000    000113567899999999999999999999985


No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00  E-value=5.7e-42  Score=313.22  Aligned_cols=252  Identities=17%  Similarity=0.225  Sum_probs=190.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccC-C-CchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc-----
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDG-S-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI-----  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~-~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  132 (347)
                      .++|...+.||+|+||.||+|.. .++..+++|.... . .....+.+.+|+.++++++||||+++++++.....     
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~  102 (353)
T 3coi_A           23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY  102 (353)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred             CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence            46788899999999999999998 4455445554433 2 22334678999999999999999999999987654     


Q ss_pred             -cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCC
Q 045067          133 -PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFS  211 (347)
Q Consensus       133 -~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg  211 (347)
                       .++||||+. ++|.+++.       ..+++..+..++.|++.||.|||   +.+|+||||||+||+++.++.+||+|||
T Consensus       103 ~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg  171 (353)
T 3coi_A          103 DFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFG  171 (353)
T ss_dssp             CCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred             eEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecc
Confidence             499999998 58888774       35899999999999999999999   9999999999999999999999999999


Q ss_pred             CCccCCCCCceeeccccccCCccccccccc-CCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHh
Q 045067          212 LSASIPEGETYIDDGVKGTSGIVAPEYART-GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIE  290 (347)
Q Consensus       212 ~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  290 (347)
                      ++......    .....+|+.|+|||.+.+ ..++.++||||+||++|+|+ +|+.||.....        .........
T Consensus       172 ~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~~--------~~~~~~i~~  238 (353)
T 3coi_A          172 LARHADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEML-TGKTLFKGKDY--------LDQLTQILK  238 (353)
T ss_dssp             CTTC------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHH-HSSCSSBSSCH--------HHHHHHHHH
T ss_pred             cccCCCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCH--------HHHHHHHHH
Confidence            99765432    234578999999998876 67899999999999999999 89999975321        111111111


Q ss_pred             c-c--------------------CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          291 N-R--------------------GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       291 ~-~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      . +                    .......+..  .......+..+.+++.+||+.||++|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          239 VTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDF--TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             HHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCT--TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccH--HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0 0                    0000000000  0111233567889999999999999999999985


No 239
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00  E-value=1.3e-42  Score=315.47  Aligned_cols=252  Identities=17%  Similarity=0.224  Sum_probs=169.0

Q ss_pred             HhccCCCC-CeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHH-HHHhcCCCceeeeeeeeee----CCc
Q 045067           60 ATNNYHYR-NIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIV-FASQMSHNNVLRLIGCCLE----VEI  132 (347)
Q Consensus        60 ~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~----~~~  132 (347)
                      ..++|... ++||+|+||+||+|.. .++..+++|++...     ....+|+. .++.++||||+++++++..    ...
T Consensus        26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~  100 (336)
T 3fhr_A           26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC  100 (336)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence            46678875 4699999999999999 45555555555432     12233333 3566799999999999876    445


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC---CCceEEec
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE---RYVPKLFN  209 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~---~~~~kl~D  209 (347)
                      .++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.   ++.+||+|
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~D  174 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQER---GDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTD  174 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC----CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECC
T ss_pred             EEEEEeccCCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEec
Confidence            89999999999999999864   2346999999999999999999999   999999999999999986   45599999


Q ss_pred             CCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          210 FSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       210 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      ||++.......   .....||+.|+|||++.+..++.++|||||||++|+|+ +|..||........     ........
T Consensus       175 fg~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~~~~-----~~~~~~~~  245 (336)
T 3fhr_A          175 FGFAKETTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL-CGFPPFYSNTGQAI-----SPGMKRRI  245 (336)
T ss_dssp             CTTCEEC-------------------------CHHHHHHHHHHHHHHHHHHH-HSSCCC---------------------
T ss_pred             cccceeccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHH-HCCCCCCCccchhh-----hhhHHHhh
Confidence            99997654322   23457899999999998889999999999999999999 89999965332100     00000000


Q ss_pred             hccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          290 ENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..... ..  +    .......+..+.+++.+||+.||++|||+.|+++
T Consensus       246 ~~~~~-~~--~----~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          246 RLGQY-GF--P----NPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             ------CC--C----TTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hcccc-cc--C----chhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00000 00  0    0011123556889999999999999999999987


No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00  E-value=6.6e-43  Score=313.93  Aligned_cols=246  Identities=21%  Similarity=0.299  Sum_probs=187.4

Q ss_pred             HHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCc------hhHHHHHHHHHHHHhc----CCCceeee
Q 045067           55 KELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVF------DAYDCCFNNIVFASQM----SHNNVLRL  123 (347)
Q Consensus        55 ~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l  123 (347)
                      .+.....++|...+.||+|+||.||+|.. .++..+++|.+.....      .....+.+|+.++.++    +||||+++
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~  103 (312)
T 2iwi_A           24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRL  103 (312)
T ss_dssp             ---------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCE
T ss_pred             cchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeE
Confidence            34566678899999999999999999998 5555555555543321      1224466899999998    89999999


Q ss_pred             eeeeeeCCccEEEEEe-CCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC-C
Q 045067          124 IGCCLEVEIPVLVFES-AEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS-E  201 (347)
Q Consensus       124 ~~~~~~~~~~~lv~e~-~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~-~  201 (347)
                      ++++.+.+..++|+|+ +.+++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+||+++ .
T Consensus       104 ~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~  175 (312)
T 2iwi_A          104 LDWFETQEGFMLVLERPLPAQDLFDYITEK-----GPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLR  175 (312)
T ss_dssp             EEEC-----CEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETT
T ss_pred             EEEEecCCeEEEEEEecCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCC
Confidence            9999999999999999 7889999999875     57999999999999999999999   99999999999999999 8


Q ss_pred             CCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCch
Q 045067          202 RYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESF  280 (347)
Q Consensus       202 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~  280 (347)
                      ++.+||+|||++.......   .....||+.|+|||++.+..+ +.++||||||+++|+|+ +|+.||....        
T Consensus       176 ~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~--------  243 (312)
T 2iwi_A          176 RGCAKLIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV-CGDIPFERDQ--------  243 (312)
T ss_dssp             TTEEEECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHH-HSSCSCCSHH--------
T ss_pred             CCeEEEEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHH-HCCCCCCChH--------
Confidence            8999999999998765432   234568999999998876665 45899999999999999 8999986321        


Q ss_pred             HHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          281 EMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                            ..... ..      ..     ....+..+.+++.+||+.||++|||+.|+++
T Consensus       244 ------~~~~~-~~------~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          244 ------EILEA-EL------HF-----PAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             ------HHHHT-CC------CC-----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ------HHhhh-cc------CC-----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  01111 00      00     0122446789999999999999999999986


No 241
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00  E-value=2.9e-43  Score=317.57  Aligned_cols=248  Identities=20%  Similarity=0.281  Sum_probs=195.2

Q ss_pred             CHHHHHHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC-c-----hhHHHHHHHHHHHHhcC--CCceeee
Q 045067           53 SAKELERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV-F-----DAYDCCFNNIVFASQMS--HNNVLRL  123 (347)
Q Consensus        53 ~~~e~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~-~-----~~~~~~~~E~~~l~~l~--h~niv~l  123 (347)
                      +..+.....++|...+.||+|+||.||+|.. .++..+++|.+.... .     ...+.+.+|+.++++++  ||||+++
T Consensus        34 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~  113 (320)
T 3a99_A           34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRL  113 (320)
T ss_dssp             ------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCE
T ss_pred             cccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEE
Confidence            3345556678899999999999999999998 445544455443221 1     12245778999999996  5999999


Q ss_pred             eeeeeeCCccEEEEEeCCC-CCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEEC-C
Q 045067          124 IGCCLEVEIPVLVFESAEY-GNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVS-E  201 (347)
Q Consensus       124 ~~~~~~~~~~~lv~e~~~~-g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~-~  201 (347)
                      ++++.+++..++|+|++.+ ++|.+++...     ..+++..+..++.|++.||.|||   +.+|+||||||+|||++ .
T Consensus       114 ~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~  185 (320)
T 3a99_A          114 LDWFERPDSFVLILERPEPVQDLFDFITER-----GALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLN  185 (320)
T ss_dssp             EEEEECSSEEEEEEECCSSEEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETT
T ss_pred             EEEEecCCcEEEEEEcCCCCccHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCC
Confidence            9999999999999999976 8999999875     67999999999999999999999   99999999999999999 7


Q ss_pred             CCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCC-CCccchHHHHHHHHHHHhcCCCccccCccCCCCCch
Q 045067          202 RYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYL-NEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESF  280 (347)
Q Consensus       202 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~  280 (347)
                      ++.+||+|||++.......   .....||+.|+|||++.+..+ +.++|||||||++|||+ +|+.||....        
T Consensus       186 ~~~~kL~Dfg~~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~-~g~~pf~~~~--------  253 (320)
T 3a99_A          186 RGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV-CGDIPFEHDE--------  253 (320)
T ss_dssp             TTEEEECCCTTCEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHH-HSSCSCCSHH--------
T ss_pred             CCCEEEeeCcccccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHH-HCCCCCCChh--------
Confidence            8999999999998765432   234569999999998876655 68899999999999999 8999985321        


Q ss_pred             HHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          281 EMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                            .......   ...+         ..+.++.+++.+||+.||++|||+.|+++
T Consensus       254 ------~~~~~~~---~~~~---------~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          254 ------EIIRGQV---FFRQ---------RVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             ------HHHHCCC---CCSS---------CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ------hhhcccc---cccc---------cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence                  0111110   0111         12346789999999999999999999986


No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00  E-value=2.4e-42  Score=323.47  Aligned_cols=249  Identities=19%  Similarity=0.289  Sum_probs=184.6

Q ss_pred             hccCCCCCeecccCceEE-EEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEEEE
Q 045067           61 TNNYHYRNIITESSIFRL-CQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~V-y~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e  138 (347)
                      ..+|...++||+|+||+| |++..++..||+|++.....    ..+.+|+.+++++ +||||+++++++.+.+..++|||
T Consensus        23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E   98 (432)
T 3p23_A           23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE   98 (432)
T ss_dssp             TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence            356888899999999985 45555777777777754332    3367899999999 79999999999999999999999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC-----CCceEEecCCCC
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE-----RYVPKLFNFSLS  213 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~-----~~~~kl~Dfg~a  213 (347)
                      |+. |+|.+++...    ....+...+..++.|++.||.|||   +.+|+||||||+|||++.     ...+||+|||++
T Consensus        99 ~~~-g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a  170 (432)
T 3p23_A           99 LCA-ATLQEYVEQK----DFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC  170 (432)
T ss_dssp             CCS-EEHHHHHHSS----SCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred             CCC-CCHHHHHHhc----CCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence            997 5999999763    234455566789999999999999   999999999999999953     336789999999


Q ss_pred             ccCCCCCc--eeeccccccCCcccccccc---cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          214 ASIPEGET--YIDDGVKGTSGIVAPEYAR---TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       214 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      +.......  .......||+.|+|||++.   ...++.++||||+||++|||++.|..||.....         ......
T Consensus       171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---------~~~~~~  241 (432)
T 3p23_A          171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---------RQANIL  241 (432)
T ss_dssp             ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---------HHHHHH
T ss_pred             eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---------HHHHHH
Confidence            87654322  1234467999999999887   456788999999999999999449999954321         111111


Q ss_pred             HhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ...... ...       .........+.+++.+||+.||++|||+.|+++
T Consensus       242 ~~~~~~-~~~-------~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          242 LGACSL-DCL-------HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             TTCCCC-TTS-------CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hccCCc-ccc-------CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            111111 000       111233556789999999999999999999984


No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00  E-value=3.1e-42  Score=323.27  Aligned_cols=252  Identities=23%  Similarity=0.254  Sum_probs=181.3

Q ss_pred             CCCCCeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEEEEeCC
Q 045067           64 YHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLVFESAE  141 (347)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~  141 (347)
                      |...+.||+|+||+||.+.. ++..+|+|++...    ..+.+.+|+.++.++ +||||+++++++.+++..++||||+.
T Consensus        17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~   92 (434)
T 2rio_A           17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN   92 (434)
T ss_dssp             EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence            44567899999999976555 6666666665432    235678999999887 89999999999999999999999997


Q ss_pred             CCCHHHHHhhhccCCC--CCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCC-------------CceE
Q 045067          142 YGNLHDLLKRSYQSHS--EPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSER-------------YVPK  206 (347)
Q Consensus       142 ~g~L~~~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~-------------~~~k  206 (347)
                       |+|.+++........  ...++..+..++.|++.||+|||   +.+|+||||||+|||++.+             +.+|
T Consensus        93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k  168 (434)
T 2rio_A           93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL  168 (434)
T ss_dssp             -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred             -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEE
Confidence             599999976411100  00123345789999999999999   9999999999999999754             4899


Q ss_pred             EecCCCCccCCCCCce---eeccccccCCccccccccc-------CCCCCccchHHHHHHHHHHHhcCCCccccCccCCC
Q 045067          207 LFNFSLSASIPEGETY---IDDGVKGTSGIVAPEYART-------GYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNG  276 (347)
Q Consensus       207 l~Dfg~a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~  276 (347)
                      |+|||++.........   ......||+.|+|||++.+       ..++.++|||||||++|||+++|..||.....   
T Consensus       169 L~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~---  245 (434)
T 2rio_A          169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS---  245 (434)
T ss_dssp             ECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT---
T ss_pred             EcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh---
Confidence            9999999877654322   1234579999999998865       67899999999999999999449999964321   


Q ss_pred             CCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          277 DESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                         ...    ...... .. .  +.. ........+.++.+++.+||+.||++|||+.++++
T Consensus       246 ---~~~----~i~~~~-~~-~--~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          246 ---RES----NIIRGI-FS-L--DEM-KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             ---HHH----HHHHTC-CC-C--CCC-TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---hHH----HHhcCC-CC-c--ccc-cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence               111    111111 00 0  000 11112345678899999999999999999999985


No 244
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00  E-value=2.6e-42  Score=334.28  Aligned_cols=269  Identities=16%  Similarity=0.152  Sum_probs=198.1

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeee------CCc
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE------VEI  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~  132 (347)
                      .++|...+.||+|+||+||+|.. .++..+++|... .......+.+.+|+.++++++||||+++++++..      ++.
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~   92 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL   92 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence            36799999999999999999998 445445555444 3344556779999999999999999999998765      677


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCc---eEEec
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYV---PKLFN  209 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~---~kl~D  209 (347)
                      .++||||+++|+|.+++...  .....+++..+..++.+++.||+|||   +.+|+||||||+||+++.++.   +||+|
T Consensus        93 ~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~D  167 (676)
T 3qa8_A           93 PLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIID  167 (676)
T ss_dssp             CCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECS
T ss_pred             EEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcc
Confidence            89999999999999999863  12246889999999999999999999   999999999999999997765   89999


Q ss_pred             CCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          210 FSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       210 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      ||++........  .....||+.|+|||.+.+..++.++||||+||++|+|+ +|..||.....       ...+.....
T Consensus       168 FG~a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLl-tG~~Pf~~~~~-------~~~~~~~i~  237 (676)
T 3qa8_A          168 LGYAKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI-TGFRPFLPNWQ-------PVQWHGKVR  237 (676)
T ss_dssp             CCCCCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHH-SSCSSCCSSCH-------HHHSSTTCC
T ss_pred             cccccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHH-HCCCCCCcccc-------hhhhhhhhh
Confidence            999987654332  23467999999999999999999999999999999999 99999964211       000000000


Q ss_pred             ----hccCcccc------cCCccC-CchhhHHHHHHHHHHHHHhccCCCCCCCCHHH-----HHHHHHHHH
Q 045067          290 ----ENRGFNGI------VDPRII-GDELLEHKLQSSFELAFQCQSASAEDRPTMID-----VAKQIKKMY  344 (347)
Q Consensus       290 ----~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~e-----ll~~L~~i~  344 (347)
                          ........      +..... ........+..+.+++.+||+.||++|||+.+     ..+.++++.
T Consensus       238 ~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL  308 (676)
T 3qa8_A          238 EKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSIL  308 (676)
T ss_dssp             ------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHH
T ss_pred             cccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHH
Confidence                00000000      001111 11122345678899999999999999999988     455555554


No 245
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00  E-value=2.1e-41  Score=304.66  Aligned_cols=254  Identities=17%  Similarity=0.232  Sum_probs=177.1

Q ss_pred             HHHhccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCCchhH-HHHHHHHHHHHhcCCCceeeeeeeeeeCCccE
Q 045067           58 ERATNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSVFDAY-DCCFNNIVFASQMSHNNVLRLIGCCLEVEIPV  134 (347)
Q Consensus        58 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~~~~~-~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~  134 (347)
                      ....++|...+.||+|+||.||+|.. .++..+++|.+. ....... +.+..+..+++.++||||+++++++.+++..+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~  100 (318)
T 2dyl_A           21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVF  100 (318)
T ss_dssp             ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEE
Confidence            33456788899999999999999999 444444444444 3332222 33444555678889999999999999999999


Q ss_pred             EEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCC-CeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          135 LVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSR-PIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       135 lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~-~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      +||||+ ++.+..+....    ...+++..+..++.|++.||.|||   +. +++||||||+||+++.++.+||+|||++
T Consensus       101 lv~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH---~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  172 (318)
T 2dyl_A          101 IAMELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLK---EKHGVIHRDVKPSNILLDERGQIKLCDFGIS  172 (318)
T ss_dssp             EEECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHH---HHHCCCCCCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEEecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHH---hhCCEEeCCCCHHHEEECCCCCEEEEECCCc
Confidence            999999 45666665542    267999999999999999999999   85 9999999999999999999999999998


Q ss_pred             ccCCCCCceeeccccccCCcccccccc-----cCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHH
Q 045067          214 ASIPEGETYIDDGVKGTSGIVAPEYAR-----TGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKY  288 (347)
Q Consensus       214 ~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  288 (347)
                      ........  .....||+.|+|||.+.     +..++.++|||||||++|+|+ +|+.||.....       ........
T Consensus       173 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~-~g~~pf~~~~~-------~~~~~~~~  242 (318)
T 2dyl_A          173 GRLVDDKA--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA-TGQFPYKNCKT-------DFEVLTKV  242 (318)
T ss_dssp             ----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHH-HSSCTTTTCCS-------HHHHHHHH
T ss_pred             hhccCCcc--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHH-hCCCCCCCCCc-------cHHHHHHH
Confidence            76544322  23456899999999884     457889999999999999999 89999964221       22222333


Q ss_pred             HhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          289 IENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      ..... .     .....   ...+..+.+++.+||+.||.+|||+.++++
T Consensus       243 ~~~~~-~-----~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          243 LQEEP-P-----LLPGH---MGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHSCC-C-----CCCSS---SCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             hccCC-C-----CCCcc---CCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            22211 1     01100   012346789999999999999999999986


No 246
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00  E-value=1.1e-41  Score=336.63  Aligned_cols=240  Identities=20%  Similarity=0.227  Sum_probs=192.4

Q ss_pred             hccCCCCCeecccCceEEEEEEe-C-CceEEEEEEcc-CCCchhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCc-----
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-P-DRTISVVKFID-GSVFDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEI-----  132 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~~v~k~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----  132 (347)
                      .++|...+.||+|+||.||+|.+ . ++..+++|.+. .......+.+.+|+.++.+++||||+++++++...+.     
T Consensus        79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~  158 (681)
T 2pzi_A           79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV  158 (681)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred             CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence            47899999999999999999998 3 45555555544 3334455678999999999999999999999987665     


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCC
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSL  212 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~  212 (347)
                      .||||||+++++|.+++.       ..+++..+..++.|++.||.|||   +.+|+||||||+|||++.+ .+||+|||+
T Consensus       159 ~~lv~E~~~g~~L~~~~~-------~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~-~~kl~DFG~  227 (681)
T 2pzi_A          159 GYIVMEYVGGQSLKRSKG-------QKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEE-QLKLIDLGA  227 (681)
T ss_dssp             EEEEEECCCCEECC-----------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred             eEEEEEeCCCCcHHHHHh-------CCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCC-cEEEEeccc
Confidence            699999999999998774       36999999999999999999999   9999999999999999875 999999999


Q ss_pred             CccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhcc
Q 045067          213 SASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENR  292 (347)
Q Consensus       213 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  292 (347)
                      ++.....     ....||+.|+|||++.+.. +.++|||||||++|+|+ +|.+||......                  
T Consensus       228 a~~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~-~g~~~~~~~~~~------------------  282 (681)
T 2pzi_A          228 VSRINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALT-LDLPTRNGRYVD------------------  282 (681)
T ss_dssp             CEETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHH-SCCCEETTEECS------------------
T ss_pred             chhcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHH-hCCCCCcccccc------------------
Confidence            9876543     3357999999999887664 89999999999999999 999888642210                  


Q ss_pred             CcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCC-HHHHHHHHHHHH
Q 045067          293 GFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPT-MIDVAKQIKKMY  344 (347)
Q Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs-~~ell~~L~~i~  344 (347)
                              .+............+.+++.+||+.||++||+ +.++...|..+.
T Consensus       283 --------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  327 (681)
T 2pzi_A          283 --------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL  327 (681)
T ss_dssp             --------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             --------cccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence                    00011112233457889999999999999995 777777777664


No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00  E-value=1.6e-40  Score=294.72  Aligned_cols=231  Identities=12%  Similarity=0.024  Sum_probs=180.9

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEccCCC---chhHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEE
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFIDGSV---FDAYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLV  136 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv  136 (347)
                      .+.|...+.||+|+||.||+|.. .++..+++|++....   ....+.+.+|+.++.+++||||+++++++.+++..++|
T Consensus        30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv  109 (286)
T 3uqc_A           30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV  109 (286)
T ss_dssp             TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence            35699999999999999999999 445556666655432   23346789999999999999999999999999999999


Q ss_pred             EEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccC
Q 045067          137 FESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       137 ~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||++|++|.+++..      + .....+.+++.|++.||+|||   +.||+||||||+|||++.++.+||++++     
T Consensus       110 ~e~~~g~~L~~~l~~------~-~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIll~~~g~~kl~~~~-----  174 (286)
T 3uqc_A          110 AEWIRGGSLQEVADT------S-PSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVRVSIDGDVVLAYPA-----  174 (286)
T ss_dssp             EECCCEEEHHHHHTT------C-CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEETTSCEEECSCC-----
T ss_pred             EEecCCCCHHHHHhc------C-CChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEEEcCCCCEEEEecc-----
Confidence            999999999999964      2 355678899999999999999   9999999999999999999999998543     


Q ss_pred             CCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCccc
Q 045067          217 PEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNG  296 (347)
Q Consensus       217 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (347)
                                      |++       .++.++|||||||++|||+ +|+.||...........              ...
T Consensus       175 ----------------~~~-------~~~~~~Di~slG~il~ell-tg~~Pf~~~~~~~~~~~--------------~~~  216 (286)
T 3uqc_A          175 ----------------TMP-------DANPQDDIRGIGASLYALL-VNRWPLPEAGVRSGLAP--------------AER  216 (286)
T ss_dssp             ----------------CCT-------TCCHHHHHHHHHHHHHHHH-HSEECSCCCSBCCCSEE--------------CCB
T ss_pred             ----------------ccC-------CCCchhHHHHHHHHHHHHH-HCCCCCCcCCcchhhHH--------------HHH
Confidence                            233       2689999999999999999 99999975433110000              000


Q ss_pred             ccCCccC-CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHHHHHHHHH
Q 045067          297 IVDPRII-GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAKQIKKMYK  345 (347)
Q Consensus       297 ~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~~L~~i~~  345 (347)
                      ....... ........+.++.+++.+||+.||++| |+.|+++.|+++..
T Consensus       217 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~  265 (286)
T 3uqc_A          217 DTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATA  265 (286)
T ss_dssp             CTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC
T ss_pred             HhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhc
Confidence            0000000 001112335578899999999999999 99999999998754


No 248
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00  E-value=6.4e-40  Score=292.82  Aligned_cols=231  Identities=15%  Similarity=0.196  Sum_probs=176.2

Q ss_pred             HhccCCCC-CeecccCceEEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHH-HhcCCCceeeeeeeeee----CCc
Q 045067           60 ATNNYHYR-NIITESSIFRLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFA-SQMSHNNVLRLIGCCLE----VEI  132 (347)
Q Consensus        60 ~~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~  132 (347)
                      ..++|... +.||+|+||.||+|.. .++..+++|.+...     ..+.+|+.++ +.++||||+++++++.+    ...
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~   89 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKC   89 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence            34567666 7899999999999998 55555555555432     4577899988 55589999999999887    678


Q ss_pred             cEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECC---CCceEEec
Q 045067          133 PVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSE---RYVPKLFN  209 (347)
Q Consensus       133 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~---~~~~kl~D  209 (347)
                      .++||||+++|+|.+++...   ....+++..+..++.|++.||.|||   +.+|+||||||+||+++.   ++.+||+|
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~D  163 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTD  163 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHC---TTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred             EEEEEeecCCCcHHHHHHhc---cCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEec
Confidence            89999999999999999874   2346999999999999999999999   999999999999999998   78999999


Q ss_pred             CCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCccccCccCCCCCchHHHHHHHHH
Q 045067          210 FSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYI  289 (347)
Q Consensus       210 fg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  289 (347)
                      ||++....                       +..++.++||||+||++|+|+ +|+.||........             
T Consensus       164 fg~a~~~~-----------------------~~~~~~~~DiwslG~il~el~-tg~~pf~~~~~~~~-------------  206 (299)
T 3m2w_A          164 FGFAKETT-----------------------GEKYDKSCDMWSLGVIMYILL-CGYPPFYSNHGLAI-------------  206 (299)
T ss_dssp             CTTCEECT-----------------------TCGGGGHHHHHHHHHHHHHHH-HSSCSCCC-------------------
T ss_pred             cccccccc-----------------------cccCCchhhHHHHHHHHHHHH-HCCCCCCCCcchhh-------------
Confidence            99885432                       244678999999999999999 89999964322000             


Q ss_pred             hccCcccccCCccC-CchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHHH
Q 045067          290 ENRGFNGIVDPRII-GDELLEHKLQSSFELAFQCQSASAEDRPTMIDVAK  338 (347)
Q Consensus       290 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell~  338 (347)
                      .............. ........+.++.+++.+||+.||++|||+.|+++
T Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          207 SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             -CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            00000001111110 00111233567899999999999999999999986


No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00  E-value=7e-40  Score=305.41  Aligned_cols=244  Identities=15%  Similarity=0.127  Sum_probs=175.2

Q ss_pred             hccCCCCCeecccCceEEEEEEe-CCceEEEEEEcc-CCC--chhHHHHHHHHHHHHhcCC-Cceee-------------
Q 045067           61 TNNYHYRNIITESSIFRLCQGVL-PDRTISVVKFID-GSV--FDAYDCCFNNIVFASQMSH-NNVLR-------------  122 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~~v~k~~~-~~~--~~~~~~~~~E~~~l~~l~h-~niv~-------------  122 (347)
                      +.+|...++||+|+||+||+|.+ .++..+++|+.. ...  ....+.+.+|+.++..++| +|...             
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~  156 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL  156 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred             ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence            34577778999999999999998 444444444444 222  2224778999999999976 22111             


Q ss_pred             --------eeeeeee-----CCccEEEEEeCCCCCHHHHHhhhc--cCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCe
Q 045067          123 --------LIGCCLE-----VEIPVLVFESAEYGNLHDLLKRSY--QSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPI  187 (347)
Q Consensus       123 --------l~~~~~~-----~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~i  187 (347)
                              +..++..     ....+++|+++. ++|.++++...  ......+++..+..++.|++.||+|||   +.+|
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i  232 (413)
T 3dzo_A          157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQ-SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL  232 (413)
T ss_dssp             EECCC---------------CCSEEEEEECCS-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred             cccCCCCccccccCCCccccccceEEEeehhc-CCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence                    1111111     124567777765 69999985210  112356888899999999999999999   9999


Q ss_pred             EeccCCCCCeEECCCCceEEecCCCCccCCCCCceeeccccccCCccccccc----------ccCCCCCccchHHHHHHH
Q 045067          188 VFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYA----------RTGYLNEKCDVYSFGLLL  257 (347)
Q Consensus       188 vH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~G~~l  257 (347)
                      +||||||+|||++.++.+||+|||+++.....    .....| +.|+|||++          .+..++.++|||||||++
T Consensus       233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil  307 (413)
T 3dzo_A          233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI  307 (413)
T ss_dssp             ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred             ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence            99999999999999999999999998765432    344567 999999988          555688999999999999


Q ss_pred             HHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHHHHHHHHHHhccCCCCCCCCHHHHH
Q 045067          258 LQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQSSFELAFQCQSASAEDRPTMIDVA  337 (347)
Q Consensus       258 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~P~~RPs~~ell  337 (347)
                      |||+ +|+.||.......                 .....+....       ..++.+.+++.+||+.||++|||+.+++
T Consensus       308 ~ell-tg~~Pf~~~~~~~-----------------~~~~~~~~~~-------~~~~~~~~li~~~l~~dP~~Rpt~~~~l  362 (413)
T 3dzo_A          308 YWIW-CADLPNTDDAALG-----------------GSEWIFRSCK-------NIPQPVRALLEGFLRYPKEDRLLPLQAM  362 (413)
T ss_dssp             HHHH-HSSCCCCTTGGGS-----------------CSGGGGSSCC-------CCCHHHHHHHHHHTCSSGGGSCCHHHHT
T ss_pred             HHHH-HCCCCCCCcchhh-----------------hHHHHHhhcc-------cCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            9999 8999996533210                 1111111100       1235688999999999999999988876


Q ss_pred             H
Q 045067          338 K  338 (347)
Q Consensus       338 ~  338 (347)
                      +
T Consensus       363 ~  363 (413)
T 3dzo_A          363 E  363 (413)
T ss_dssp             T
T ss_pred             h
Confidence            4


No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00  E-value=2.9e-40  Score=299.88  Aligned_cols=244  Identities=12%  Similarity=0.080  Sum_probs=182.6

Q ss_pred             hccCCCCCeecccCceEEEEEEeCCceEEEEEEccCC-------CchhHHHHHHHHHHHHhcC---------CCceeeee
Q 045067           61 TNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGS-------VFDAYDCCFNNIVFASQMS---------HNNVLRLI  124 (347)
Q Consensus        61 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~-------~~~~~~~~~~E~~~l~~l~---------h~niv~l~  124 (347)
                      .++|...+.||+|+||+||+|+.++..+|+|++....       .....+.+.+|+.++++++         ||||+++.
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~   98 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN   98 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred             cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence            4668889999999999999999976666666665432       1223467899999999886         55555555


Q ss_pred             ee-----------------eee-------------CCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHH
Q 045067          125 GC-----------------CLE-------------VEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIAN  174 (347)
Q Consensus       125 ~~-----------------~~~-------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~  174 (347)
                      ++                 +.+             .+..++||||+++|++.+.+.+      ..+++..+..++.|++.
T Consensus        99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~~  172 (336)
T 2vuw_A           99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLTA  172 (336)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHHH
T ss_pred             ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHHH
Confidence            54                 433             6789999999999987777644      56899999999999999


Q ss_pred             HHHHhhcCCCCCeEeccCCCCCeEECCCC--------------------ceEEecCCCCccCCCCCceeeccccccCCcc
Q 045067          175 VFAYLHIGFSRPIVFRDLKSSYILVSERY--------------------VPKLFNFSLSASIPEGETYIDDGVKGTSGIV  234 (347)
Q Consensus       175 ~l~~lH~~~~~~ivH~dlkp~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~  234 (347)
                      ||+|||+  +.+|+||||||+|||++.++                    .+||+|||+|+.....      ...||+.|+
T Consensus       173 aL~~lH~--~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~y~  244 (336)
T 2vuw_A          173 SLAVAEA--SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDVSM  244 (336)
T ss_dssp             HHHHHHH--HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCCTT
T ss_pred             HHHHHHH--hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeeccc
Confidence            9999993  47899999999999999887                    8999999999865432      347999999


Q ss_pred             cccccccCCCCCccchHHHHHH-HHHHHhcCCCccccCccCCCCCchHHHHHHHHHhccCcccccCCccCCchhhHHHHH
Q 045067          235 APEYARTGYLNEKCDVYSFGLL-LLQLLSTGEDLFNMGLRLNGDESFEMDFVKKYIENRGFNGIVDPRIIGDELLEHKLQ  313 (347)
Q Consensus       235 aPE~~~~~~~~~~~Dv~s~G~~-l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  313 (347)
                      |||++.+.. +.++||||+|++ .++++ .|..||....       +...............     ...........++
T Consensus       245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~-~g~~p~~~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~~~~~s~  310 (336)
T 2vuw_A          245 DEDLFTGDG-DYQFDIYRLMKKENNNRW-GEYHPYSNVL-------WLHYLTDKMLKQMTFK-----TKCNTPAMKQIKR  310 (336)
T ss_dssp             CSGGGCCCS-SHHHHHHHHHHHHHTTCT-TSCCTHHHHH-------HHHHHHHHHHHTCCCS-----SCCCSHHHHHHHH
T ss_pred             ChhhhcCCC-ccceehhhhhCCCCcccc-cccCCCcchh-------hhhHHHHhhhhhhccC-----cccchhhhhhcCH
Confidence            999998776 899999998877 66677 8888885210       0011111222111111     1112233456778


Q ss_pred             HHHHHHHHhccCCCCCCCCHHHHH
Q 045067          314 SSFELAFQCQSASAEDRPTMIDVA  337 (347)
Q Consensus       314 ~~~~l~~~cl~~~P~~RPs~~ell  337 (347)
                      ++.+|+.+||+.|     |+.|++
T Consensus       311 ~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          311 KIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHHhccC-----CHHHHH
Confidence            9999999999976     999887


No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.98  E-value=1.1e-33  Score=272.81  Aligned_cols=153  Identities=16%  Similarity=0.080  Sum_probs=116.9

Q ss_pred             HHHHHHHHHHHHhc-CCCceeeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhh
Q 045067          102 YDCCFNNIVFASQM-SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLH  180 (347)
Q Consensus       102 ~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH  180 (347)
                      .+++.+|+.+|+++ .|+||+++++++.+++..||||||++|++|.++|...     ++++..   +|+.||+.||+|+|
T Consensus       285 ~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~-----~~l~~~---~I~~QIl~AL~ylH  356 (569)
T 4azs_A          285 KYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAG-----EEIDRE---KILGSLLRSLAALE  356 (569)
T ss_dssp             HHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTT-----CCCCHH---HHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhC-----CCCCHH---HHHHHHHHHHHHHH
Confidence            46799999999999 7999999999999999999999999999999999874     567654   58899999999999


Q ss_pred             cCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHH
Q 045067          181 IGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQL  260 (347)
Q Consensus       181 ~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el  260 (347)
                         ++|||||||||+|||++.+|.+||+|||+|+....... ...+.+||+.|+|||++.+. +..++|+||+|++++++
T Consensus       357 ---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~-~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l  431 (569)
T 4azs_A          357 ---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCS-WPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNL  431 (569)
T ss_dssp             ---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---C-CSHHHHHHHHHHHHHHC------------------CCC
T ss_pred             ---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCc-cccCceechhhccHHHhCCC-CCCcccccccccchhhh
Confidence               99999999999999999999999999999987654432 23456799999999998764 56789999999998887


Q ss_pred             HhcCCCcc
Q 045067          261 LSTGEDLF  268 (347)
Q Consensus       261 ~~~g~~p~  268 (347)
                      . .+..++
T Consensus       432 ~-~~~~~~  438 (569)
T 4azs_A          432 P-QPWSNW  438 (569)
T ss_dssp             C-TTHHHH
T ss_pred             c-cccchh
Confidence            6 444443


No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.96  E-value=2.3e-30  Score=248.26  Aligned_cols=185  Identities=12%  Similarity=0.099  Sum_probs=146.7

Q ss_pred             CCCCeecccCceEEEEEEeCCceEEEEEEccCCCch-------hHHHHHHHHHHHHhcCCCceeeeeeeeeeCCccEEEE
Q 045067           65 HYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFD-------AYDCCFNNIVFASQMSHNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        65 ~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~lv~  137 (347)
                      ...+.||+|+||.||+|...+..+++|+........       ..+.+.+|+.++++++||||+++..++.+.+..+|||
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm  418 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM  418 (540)
T ss_dssp             ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred             CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence            345689999999999998888888888876543211       1345899999999999999997767767888889999


Q ss_pred             EeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCC
Q 045067          138 ESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIP  217 (347)
Q Consensus       138 e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~  217 (347)
                      ||+++++|.+++..             +..++.|++.||.|||   +++|+||||||+|||++.  .+||+|||+++...
T Consensus       419 E~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          419 SYINGKLAKDVIED-------------NLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISN  480 (540)
T ss_dssp             ECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESS--SEEECCCTTCEECC
T ss_pred             ECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECC--eEEEEECccCEECC
Confidence            99999999999853             4589999999999999   999999999999999998  99999999998875


Q ss_pred             CCCcee------eccccccCCccccccccc--CCCCCccchHHHHHHHHHHHhcCCCcc
Q 045067          218 EGETYI------DDGVKGTSGIVAPEYART--GYLNEKCDVYSFGLLLLQLLSTGEDLF  268 (347)
Q Consensus       218 ~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~el~~~g~~p~  268 (347)
                      ......      .....||+.|+|||++.+  ..|+..+|+||..+-..+-+ ..+.+|
T Consensus       481 ~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v-~~r~rY  538 (540)
T 3en9_A          481 LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDV-ERRARY  538 (540)
T ss_dssp             CHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHH-HTCSCC
T ss_pred             CccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHH-Hhcccc
Confidence            432211      135679999999999987  56788899999998888877 666554


No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.92  E-value=2.4e-25  Score=196.47  Aligned_cols=151  Identities=17%  Similarity=0.055  Sum_probs=115.2

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCc------------------hhHHHHHHHHHHHHhcCCC
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVF------------------DAYDCCFNNIVFASQMSHN  118 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~------------------~~~~~~~~E~~~l~~l~h~  118 (347)
                      +......|...+.||+|+||.||+|.+.++..+++|.......                  .....+.+|+.++++++  
T Consensus        85 ~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--  162 (282)
T 1zar_A           85 LVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--  162 (282)
T ss_dssp             HHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--
Confidence            3344445556699999999999999995455555555543211                  13456899999999999  


Q ss_pred             ceeeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeE
Q 045067          119 NVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYIL  198 (347)
Q Consensus       119 niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nil  198 (347)
                      | +++.+++.. +..++||||++||+|.+ +..           .....++.|++.||.|||   +.+|+||||||+|||
T Consensus       163 ~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NIL  225 (282)
T 1zar_A          163 G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVL  225 (282)
T ss_dssp             T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEE
T ss_pred             C-CCcCeEEec-cceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEE
Confidence            4 666665543 56799999999999988 422           123469999999999999   999999999999999


Q ss_pred             ECCCCceEEecCCCCccCCCCCceeeccccccCCccccccccc
Q 045067          199 VSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYART  241 (347)
Q Consensus       199 l~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~  241 (347)
                      ++ ++.+||+|||+|+.              +..++|||++..
T Consensus       226 l~-~~~vkl~DFG~a~~--------------~~~~~a~e~l~r  253 (282)
T 1zar_A          226 VS-EEGIWIIDFPQSVE--------------VGEEGWREILER  253 (282)
T ss_dssp             EE-TTEEEECCCTTCEE--------------TTSTTHHHHHHH
T ss_pred             EE-CCcEEEEECCCCeE--------------CCCCCHHHHHHH
Confidence            99 99999999999853              334688887753


No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.83  E-value=1.1e-20  Score=164.41  Aligned_cols=137  Identities=12%  Similarity=0.024  Sum_probs=101.7

Q ss_pred             CCCCCeecccCceEEEEEEe-CCceE--EEEEEccCCCch------------------------hHHHHHHHHHHHHhcC
Q 045067           64 YHYRNIITESSIFRLCQGVL-PDRTI--SVVKFIDGSVFD------------------------AYDCCFNNIVFASQMS  116 (347)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--~v~k~~~~~~~~------------------------~~~~~~~E~~~l~~l~  116 (347)
                      |...+.||+|+||.||+|.. .++..  +++|+.......                        ....+.+|+.++.++.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            56678999999999999998 44444  555544322100                        1135789999999998


Q ss_pred             CCce--eeeeeeeeeCCccEEEEEeCCC-C----CHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEe
Q 045067          117 HNNV--LRLIGCCLEVEIPVLVFESAEY-G----NLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVF  189 (347)
Q Consensus       117 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH  189 (347)
                      |+++  ..++++    ...+|||||+.+ |    +|.+....        .++..+..++.|++.||.|||.  +.+|+|
T Consensus       129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~--~~givH  194 (258)
T 1zth_A          129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQ--EAELVH  194 (258)
T ss_dssp             HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHH--TSCEEC
T ss_pred             hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHH--HCCEEe
Confidence            8864  333332    367899999942 3    67766532        2344667899999999999994  579999


Q ss_pred             ccCCCCCeEECCCCceEEecCCCCccC
Q 045067          190 RDLKSSYILVSERYVPKLFNFSLSASI  216 (347)
Q Consensus       190 ~dlkp~Nill~~~~~~kl~Dfg~a~~~  216 (347)
                      |||||+|||++.  .++|+|||+|...
T Consensus       195 rDlkp~NILl~~--~~~liDFG~a~~~  219 (258)
T 1zth_A          195 ADLSEYNIMYID--KVYFIDMGQAVTL  219 (258)
T ss_dssp             SSCSTTSEEESS--SEEECCCTTCEET
T ss_pred             CCCCHHHEEEcC--cEEEEECcccccC
Confidence            999999999988  9999999999654


No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.72  E-value=1.6e-18  Score=157.26  Aligned_cols=139  Identities=10%  Similarity=0.085  Sum_probs=94.4

Q ss_pred             ccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCc--------------hhHHH--------HHHHHHHHHhcCCCc
Q 045067           62 NNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVF--------------DAYDC--------CFNNIVFASQMSHNN  119 (347)
Q Consensus        62 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~--------------~~~~~--------~~~E~~~l~~l~h~n  119 (347)
                      .-|...+.||+|++|.||+|...++..+++|+......              .....        ..+|...|.++.+++
T Consensus        95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g  174 (397)
T 4gyi_A           95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG  174 (397)
T ss_dssp             SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence            34888899999999999999995555555555432210              00011        234555666664443


Q ss_pred             eeeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEE
Q 045067          120 VLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILV  199 (347)
Q Consensus       120 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill  199 (347)
                      +.....+..  ...+|||||++|++|..+...           .....++.|++.+|.+||   +.|||||||||.|||+
T Consensus       175 v~vp~p~~~--~~~~LVME~i~G~~L~~l~~~-----------~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NILl  238 (397)
T 4gyi_A          175 FPVPEPIAQ--SRHTIVMSLVDALPMRQVSSV-----------PDPASLYADLIALILRLA---KHGLIHGDFNEFNILI  238 (397)
T ss_dssp             CSCCCEEEE--ETTEEEEECCSCEEGGGCCCC-----------SCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEE
T ss_pred             CCCCeeeec--cCceEEEEecCCccHhhhccc-----------HHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEE
Confidence            321111111  234799999999887654321           123567899999999999   9999999999999999


Q ss_pred             CCCC----------ceEEecCCCCccC
Q 045067          200 SERY----------VPKLFNFSLSASI  216 (347)
Q Consensus       200 ~~~~----------~~kl~Dfg~a~~~  216 (347)
                      ++++          .+.|+||+-+...
T Consensus       239 ~~dgd~~d~~~~~~~~~iID~~Q~V~~  265 (397)
T 4gyi_A          239 REEKDAEDPSSITLTPIIIXFPQMVSM  265 (397)
T ss_dssp             EEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred             eCCCCcccccccccceEEEEeCCcccC
Confidence            8776          3899999977554


No 256
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.46  E-value=2.3e-13  Score=118.25  Aligned_cols=146  Identities=12%  Similarity=-0.013  Sum_probs=108.7

Q ss_pred             HHHHhccCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeeCCccEE
Q 045067           57 LERATNNYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNNVLRLIGCCLEVEIPVL  135 (347)
Q Consensus        57 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~l  135 (347)
                      +....+.|.....++.|+.+.||++..+++.+++|..... .......+.+|+.+++.+. +.++.++++++.+.+..++
T Consensus         9 l~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~-~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~l   87 (263)
T 3tm0_A            9 LKKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSR-YKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNL   87 (263)
T ss_dssp             HHHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGG-GTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEE
T ss_pred             HHHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcc-cCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEE
Confidence            3445567877778888999999999876655555554331 1112246889999999984 6778889999988889999


Q ss_pred             EEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC--------------------------------
Q 045067          136 VFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF--------------------------------  183 (347)
Q Consensus       136 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~--------------------------------  183 (347)
                      |||+++|.+|.+.+..          ......++.+++.+|..||+..                                
T Consensus        88 v~e~i~G~~l~~~~~~----------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  157 (263)
T 3tm0_A           88 LMSEADGVLCSEEYED----------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCEN  157 (263)
T ss_dssp             EEECCSSEEHHHHCCT----------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGG
T ss_pred             EEEecCCeehhhccCC----------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccc
Confidence            9999999998876321          1123467888999999999510                                


Q ss_pred             ------------------------CCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          184 ------------------------SRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       184 ------------------------~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                                              ...++|||++|.||+++++..+.|+||+.+
T Consensus       158 ~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a  211 (263)
T 3tm0_A          158 WEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRS  211 (263)
T ss_dssp             GSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTC
T ss_pred             ccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhc
Confidence                                    145899999999999987656679999866


No 257
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.31  E-value=4.5e-12  Score=115.34  Aligned_cols=143  Identities=13%  Similarity=0.078  Sum_probs=104.3

Q ss_pred             CCCeecccCceEEEEEEeCCceEEEEEEc--cCCCchhHHHHHHHHHHHHhcC--CCceeeeeeeeeeC---CccEEEEE
Q 045067           66 YRNIITESSIFRLCQGVLPDRTISVVKFI--DGSVFDAYDCCFNNIVFASQMS--HNNVLRLIGCCLEV---EIPVLVFE  138 (347)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~--~~~~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~e  138 (347)
                      ..+.|+.|.++.||+...+++.+++++..  ..........+.+|+.+++.+.  +..+.++++++.+.   +..++|||
T Consensus        42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme  121 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME  121 (359)
T ss_dssp             EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred             eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence            35678999999999998876665555543  2221122356889999999996  45678888888776   34899999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF-----------------------------------  183 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----------------------------------  183 (347)
                      |++|.++.+..       -..++......++.+++..|..||+..                                   
T Consensus       122 ~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  194 (359)
T 3dxp_A          122 FVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESI  194 (359)
T ss_dssp             CCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCC
T ss_pred             ecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCC
Confidence            99987764421       134678888899999999999999521                                   


Q ss_pred             --------------------CCCeEeccCCCCCeEECCCCc--eEEecCCCCcc
Q 045067          184 --------------------SRPIVFRDLKSSYILVSERYV--PKLFNFSLSAS  215 (347)
Q Consensus       184 --------------------~~~ivH~dlkp~Nill~~~~~--~kl~Dfg~a~~  215 (347)
                                          ...++|||++|.||+++.++.  +.|+||+.+..
T Consensus       195 ~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~  248 (359)
T 3dxp_A          195 PAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL  248 (359)
T ss_dssp             HHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred             hHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence                                257999999999999997753  68999998854


No 258
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.31  E-value=4e-12  Score=110.02  Aligned_cols=135  Identities=13%  Similarity=0.032  Sum_probs=93.3

Q ss_pred             cCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCc--eeeeeeeeeeCCccEEEEEeC
Q 045067           63 NYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNN--VLRLIGCCLEVEIPVLVFESA  140 (347)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~  140 (347)
                      ++....+.+.|..+.||++...++..+++|+....   ....+.+|+.+++.+.+.+  +.+++++..+++..++||||+
T Consensus        21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i   97 (264)
T 1nd4_A           21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEV   97 (264)
T ss_dssp             TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECC
T ss_pred             CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEec
Confidence            34333333456669999998755554555554433   2255789999999985444  456888888777889999999


Q ss_pred             CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-------------------------------------
Q 045067          141 EYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF-------------------------------------  183 (347)
Q Consensus       141 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-------------------------------------  183 (347)
                      +|.+|.  ..        ...   ...++.+++..|..||+..                                     
T Consensus        98 ~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (264)
T 1nd4_A           98 PGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQG  164 (264)
T ss_dssp             SSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTT
T ss_pred             CCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccC
Confidence            998874  21        111   1256677777788887421                                     


Q ss_pred             ------------------CCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          184 ------------------SRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       184 ------------------~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                                        ...++|||++|.||++++++.+.|+||+.+
T Consensus       165 ~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a  212 (264)
T 1nd4_A          165 LAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRL  212 (264)
T ss_dssp             CCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTC
T ss_pred             ccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhc
Confidence                              112999999999999987766679999976


No 259
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=99.07  E-value=1.5e-10  Score=102.66  Aligned_cols=184  Identities=16%  Similarity=0.105  Sum_probs=117.3

Q ss_pred             CCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCc--eeeeeeeeeeCC---ccEEEEEeC
Q 045067           67 RNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNN--VLRLIGCCLEVE---IPVLVFESA  140 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e~~  140 (347)
                      .+.++.|....||+..   +.++ +|+....  .....+.+|+.+++.+. +..  +.+++.....++   ..|+|||++
T Consensus        25 i~~~~~G~~n~v~~v~---~~~v-lR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i   98 (304)
T 3sg8_A           25 IEISGEGNDCIAYEIN---RDFI-FKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI   98 (304)
T ss_dssp             CCEEEECSSEEEEEST---TSEE-EEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred             eEecCCCCcceEEEEC---CEEE-EEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence            4568999999999863   4444 4443322  33467899999998883 333  334444443333   358999999


Q ss_pred             CCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC--------------------------------------
Q 045067          141 EYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIG--------------------------------------  182 (347)
Q Consensus       141 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--------------------------------------  182 (347)
                      +|.+|.+...       ..++..+...++.+++..|..||+.                                      
T Consensus        99 ~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (304)
T 3sg8_A           99 KGVPLTPLLL-------NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK  171 (304)
T ss_dssp             CCEECCHHHH-------HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred             CCeECCcccc-------ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence            9988875432       2466677777778888877777741                                      


Q ss_pred             -----------------CCCCeEeccCCCCCeEECC--CCceEEecCCCCccCCCCCceeeccccccCCc---ccccccc
Q 045067          183 -----------------FSRPIVFRDLKSSYILVSE--RYVPKLFNFSLSASIPEGETYIDDGVKGTSGI---VAPEYAR  240 (347)
Q Consensus       183 -----------------~~~~ivH~dlkp~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y---~aPE~~~  240 (347)
                                       ....++|+|++|.||+++.  +..+.|+||+.+...... ...    .....+   .+|+...
T Consensus       172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~-~Dl----~~~~~~~~~~~~~~~~  246 (304)
T 3sg8_A          172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPD-NDF----ISLMEDDEEYGMEFVS  246 (304)
T ss_dssp             HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTT-HHH----HTTCCTTTSCCHHHHH
T ss_pred             HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChH-HHH----HHHHhhccccCHHHHH
Confidence                             1135899999999999998  456789999987553211 000    000111   1222111


Q ss_pred             c-----CCC---------CCccchHHHHHHHHHHHhcCCCccc
Q 045067          241 T-----GYL---------NEKCDVYSFGLLLLQLLSTGEDLFN  269 (347)
Q Consensus       241 ~-----~~~---------~~~~Dv~s~G~~l~el~~~g~~p~~  269 (347)
                      .     +..         ..-.+.|+++.++|.+. +|..+|-
T Consensus       247 ~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~-~g~~~~~  288 (304)
T 3sg8_A          247 KILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKE-YGYMDWY  288 (304)
T ss_dssp             HHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHH-TTCHHHH
T ss_pred             HHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHH-cCCHHHH
Confidence            0     000         12258899999999999 8887764


No 260
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.89  E-value=2.1e-08  Score=89.43  Aligned_cols=136  Identities=8%  Similarity=-0.010  Sum_probs=96.0

Q ss_pred             cCCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCC----CceeeeeeeeeeCCccEEEEE
Q 045067           63 NYHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSH----NNVLRLIGCCLEVEIPVLVFE  138 (347)
Q Consensus        63 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~lv~e  138 (347)
                      .....+.++.|..+.||+.   ++.+++ |+....  .....+.+|..+++.+.+    ..+.+++++    +..++|||
T Consensus        38 ~i~~v~~l~~G~~n~vy~v---g~~~vl-R~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme  107 (320)
T 3r70_A           38 KINELRYLSSGDDSDTFLC---NEQYVV-KVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK  107 (320)
T ss_dssp             CCSCEEEEEECSSEEEEEE---TTTEEE-EEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred             ceEEEEeCCCCCCceEEEE---CCEEEE-EeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence            4556678999999999998   455544 444322  223568899999988865    123444444    56789999


Q ss_pred             eCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCC-----------------------------------
Q 045067          139 SAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGF-----------------------------------  183 (347)
Q Consensus       139 ~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~-----------------------------------  183 (347)
                      |++|.++.+..-       ..++..+...++.+++..|..||+..                                   
T Consensus       108 ~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (320)
T 3r70_A          108 YIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL  180 (320)
T ss_dssp             CCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence            999988864332       34566666677777777777777421                                   


Q ss_pred             -------------------------CCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          184 -------------------------SRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       184 -------------------------~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                                               ...++|+|++|.||+++.+..+.|+||+.+..
T Consensus       181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~  237 (320)
T 3r70_A          181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV  237 (320)
T ss_dssp             CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred             ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence                                     12359999999999999866679999998754


No 261
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.71  E-value=9.1e-08  Score=83.05  Aligned_cols=133  Identities=10%  Similarity=-0.004  Sum_probs=92.5

Q ss_pred             eecccCce-EEEEEEe-CCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeeCCccEEEEEeCCCCCH
Q 045067           69 IITESSIF-RLCQGVL-PDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNNVLRLIGCCLEVEIPVLVFESAEYGNL  145 (347)
Q Consensus        69 ~lg~G~~g-~Vy~~~~-~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g~L  145 (347)
                      .+..|..+ .||+... .++..+++|..+..   ....+.+|...|+.+. +-.+.++++++.+++..++|||+++|.++
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~  107 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA  107 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence            45556555 6998877 45555566655432   3356889999998884 33466788888888999999999999888


Q ss_pred             HHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhc--------------------------------------------
Q 045067          146 HDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHI--------------------------------------------  181 (347)
Q Consensus       146 ~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--------------------------------------------  181 (347)
                      .+.....         ......+..+++..|..||+                                            
T Consensus       108 ~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (272)
T 4gkh_A          108 FQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ  178 (272)
T ss_dssp             HHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred             cccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence            7765431         11223455566666666663                                            


Q ss_pred             -----------CCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          182 -----------GFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       182 -----------~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                                 .....++|||+.|.||+++.++.+-|+||+.+
T Consensus       179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a  221 (272)
T 4gkh_A          179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRV  221 (272)
T ss_dssp             HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTC
T ss_pred             HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccc
Confidence                       00123799999999999998777779999976


No 262
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.69  E-value=1.4e-07  Score=82.85  Aligned_cols=76  Identities=14%  Similarity=-0.029  Sum_probs=56.2

Q ss_pred             CCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCC---ceeeeeeeeeeCCccEEEEEeCCC
Q 045067           66 YRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN---NVLRLIGCCLEVEIPVLVFESAEY  142 (347)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~~~  142 (347)
                      ..+.|+.|.++.||++...++..+++|+.+.........+.+|+..|+.+.+.   .+.+++++.    ..++||||+++
T Consensus        19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g   94 (288)
T 3d1u_A           19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE   94 (288)
T ss_dssp             EEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred             ceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence            35679999999999999865555555654433332336789999999999765   467777653    46999999998


Q ss_pred             CCH
Q 045067          143 GNL  145 (347)
Q Consensus       143 g~L  145 (347)
                      +++
T Consensus        95 ~~~   97 (288)
T 3d1u_A           95 RPP   97 (288)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            775


No 263
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.65  E-value=2.5e-07  Score=81.92  Aligned_cols=136  Identities=11%  Similarity=0.013  Sum_probs=88.7

Q ss_pred             CCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCC---ceeeeeeeee-eCCccEEEEEeCCC
Q 045067           67 RNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHN---NVLRLIGCCL-EVEIPVLVFESAEY  142 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~~~  142 (347)
                      .+.++.|....||+.   ++.++++. ..  .......+.+|+.+|+.+.+.   .+.+.+.+.. ..+..++|||+++|
T Consensus        24 v~~l~~G~~n~v~~v---g~~~VlR~-~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G   97 (306)
T 3tdw_A           24 VESLGEGFRNYAILV---NGDWVFRF-PK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG   97 (306)
T ss_dssp             EEEEEECSSEEEEEE---TTTEEEEE-ES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred             eeecCCCcceeEEEE---CCEEEEEe-cC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence            346788888999998   45555554 32  223346789999999999642   3556666654 34567899999999


Q ss_pred             CCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 045067          143 GNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIG----------------------------------------  182 (347)
Q Consensus       143 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~----------------------------------------  182 (347)
                      .+|.+..-       ..++......++.+++..|..||+.                                        
T Consensus        98 ~~l~~~~~-------~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~  170 (306)
T 3tdw_A           98 QILGEDGM-------AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRD  170 (306)
T ss_dssp             EECHHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHH
T ss_pred             eECchhhh-------hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHH
Confidence            88766321       1233334444444444444444421                                        


Q ss_pred             -----------------CCCCeEeccCCCCCeEECC---CCc-eEEecCCCCcc
Q 045067          183 -----------------FSRPIVFRDLKSSYILVSE---RYV-PKLFNFSLSAS  215 (347)
Q Consensus       183 -----------------~~~~ivH~dlkp~Nill~~---~~~-~kl~Dfg~a~~  215 (347)
                                       ....++|+|+.|.||+++.   ++. +.|+||+.+..
T Consensus       171 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          171 YLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             HHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             HHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence                             1446799999999999987   455 48999997743


No 264
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.54  E-value=5.9e-07  Score=81.44  Aligned_cols=75  Identities=9%  Similarity=0.014  Sum_probs=52.8

Q ss_pred             CCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCc--eeeeeeeeeeC-CccEEEEEeCCC
Q 045067           66 YRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNN--VLRLIGCCLEV-EIPVLVFESAEY  142 (347)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~~  142 (347)
                      ..+.++.|....+|+...+++.+ ++|+....     ..+.+|+.++..+....  +.++++++.+. +..++|||+++|
T Consensus        45 ~i~~l~gG~~n~~y~v~~~g~~~-vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G  118 (362)
T 3ovc_A           45 DLMQLSEGEESRAFSFDVGGRGY-VLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG  118 (362)
T ss_dssp             EEEEEEECSSEEEEEEEETTEEE-EEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred             eEEECCCCCcceEEEEEECCcEE-EEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence            45678899999999988765555 44544432     35888999999886433  45666666654 568999999997


Q ss_pred             CCHH
Q 045067          143 GNLH  146 (347)
Q Consensus       143 g~L~  146 (347)
                      .++.
T Consensus       119 ~~l~  122 (362)
T 3ovc_A          119 VTLQ  122 (362)
T ss_dssp             EETT
T ss_pred             CCcc
Confidence            6553


No 265
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.45  E-value=3.3e-07  Score=82.89  Aligned_cols=79  Identities=6%  Similarity=-0.178  Sum_probs=52.5

Q ss_pred             Cee-cccCceEEEEEEeC-------CceEEEEEEccCCC---chhHHHHHHHHHHHHhcC-C--CceeeeeeeeeeC---
Q 045067           68 NII-TESSIFRLCQGVLP-------DRTISVVKFIDGSV---FDAYDCCFNNIVFASQMS-H--NNVLRLIGCCLEV---  130 (347)
Q Consensus        68 ~~l-g~G~~g~Vy~~~~~-------~~~~~v~k~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~---  130 (347)
                      +.| +.|..+.+|+....       ++.-+|+|+.....   ......+.+|+.+++.+. +  -.+.++++++.+.   
T Consensus        26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~  105 (357)
T 3ats_A           26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL  105 (357)
T ss_dssp             EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred             EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence            457 78888999988764       14456666654432   101245788999998884 3  2466777776654   


Q ss_pred             CccEEEEEeCCCCCHH
Q 045067          131 EIPVLVFESAEYGNLH  146 (347)
Q Consensus       131 ~~~~lv~e~~~~g~L~  146 (347)
                      +..++|||+++|.++.
T Consensus       106 g~~~~v~e~l~G~~l~  121 (357)
T 3ats_A          106 GTPFFLMDYVEGVVPP  121 (357)
T ss_dssp             SSCEEEEECCCCBCCC
T ss_pred             CCceEEEEecCCCChh
Confidence            3568999999986553


No 266
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.21  E-value=2.4e-05  Score=69.92  Aligned_cols=30  Identities=13%  Similarity=0.148  Sum_probs=27.5

Q ss_pred             CCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          184 SRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       184 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                      ...++|||+.+.||+++.++.+.|+||+.+
T Consensus       221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a  250 (346)
T 2q83_A          221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTV  250 (346)
T ss_dssp             SCCEECSSCSTTSEEECGGGCEEECCCTTC
T ss_pred             cCceecCCCCcccEEEeCCCcEEEEehhhc
Confidence            578999999999999988889999999966


No 267
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.20  E-value=9.7e-06  Score=74.33  Aligned_cols=75  Identities=13%  Similarity=0.013  Sum_probs=46.8

Q ss_pred             CCeecccCceEEEEEEe--CCceEEEEEEccCCC------chhHHHHHHHHHHHHhcCC--Cc-eeeeeeeeeeCCccEE
Q 045067           67 RNIITESSIFRLCQGVL--PDRTISVVKFIDGSV------FDAYDCCFNNIVFASQMSH--NN-VLRLIGCCLEVEIPVL  135 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~--~~~~~~v~k~~~~~~------~~~~~~~~~E~~~l~~l~h--~n-iv~l~~~~~~~~~~~l  135 (347)
                      .+.||.|..+.||++..  +++.+++|...+...      ....+++..|..+++.+..  |. +.+++.+  +.+..++
T Consensus        35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l  112 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT  112 (397)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred             EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence            45789999999999976  334555544332111      1123557789999988732  33 4455543  4556789


Q ss_pred             EEEeCCCC
Q 045067          136 VFESAEYG  143 (347)
Q Consensus       136 v~e~~~~g  143 (347)
                      |||++++.
T Consensus       113 vmE~l~g~  120 (397)
T 2olc_A          113 VMEDLSHL  120 (397)
T ss_dssp             EECCCTTS
T ss_pred             EEEeCCCc
Confidence            99999863


No 268
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.99  E-value=3.9e-05  Score=66.97  Aligned_cols=78  Identities=14%  Similarity=-0.017  Sum_probs=51.7

Q ss_pred             CCCCCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcC-C-C-ceeeeeeeeeeCCccEEEEEeC
Q 045067           64 YHYRNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS-H-N-NVLRLIGCCLEVEIPVLVFESA  140 (347)
Q Consensus        64 ~~~~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h-~-niv~l~~~~~~~~~~~lv~e~~  140 (347)
                      ....+.+|.|..+.||+.+..++..+++|..+.........+.+|+..|+.|. . + .+.+++++  +  .-++|||++
T Consensus        17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~--~~~lv~e~l   92 (288)
T 3f7w_A           17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--D--DRTLAMEWV   92 (288)
T ss_dssp             EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--E--TTEEEEECC
T ss_pred             eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--c--CceEEEEee
Confidence            34456789999999999999655555556554433333356789999998884 2 1 23444443  2  347899998


Q ss_pred             CCCCH
Q 045067          141 EYGNL  145 (347)
Q Consensus       141 ~~g~L  145 (347)
                      .++..
T Consensus        93 ~~~~~   97 (288)
T 3f7w_A           93 DERPP   97 (288)
T ss_dssp             CCCCC
T ss_pred             cccCC
Confidence            87543


No 269
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.95  E-value=6.8e-05  Score=69.24  Aligned_cols=76  Identities=13%  Similarity=0.062  Sum_probs=45.2

Q ss_pred             CCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCCceeeccc-cccCCcccccccccC---CCCCccchHHHHHHHHH
Q 045067          184 SRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETYIDDGV-KGTSGIVAPEYARTG---YLNEKCDVYSFGLLLLQ  259 (347)
Q Consensus       184 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~~l~e  259 (347)
                      ...++|||++|.||+++.++ +.++||+.+......... .... .-...|++|+.....   ......++.+....+|+
T Consensus       231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dl-a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDI-GAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN  308 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHH-HHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred             CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHH-HHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence            78899999999999998776 999999987553211000 0000 011245566544311   11223455577777777


Q ss_pred             HH
Q 045067          260 LL  261 (347)
Q Consensus       260 l~  261 (347)
                      .+
T Consensus       309 ~y  310 (420)
T 2pyw_A          309 LF  310 (420)
T ss_dssp             HH
T ss_pred             HH
Confidence            66


No 270
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.93  E-value=7.4e-05  Score=66.01  Aligned_cols=75  Identities=12%  Similarity=-0.015  Sum_probs=57.0

Q ss_pred             CCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcC---CCceeeeeeeeeeCCccEEEEEeCCCC
Q 045067           67 RNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMS---HNNVLRLIGCCLEVEIPVLVFESAEYG  143 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~~g  143 (347)
                      .+.|+.|....+|+...+++.+++ |+....   ....+.+|...|+.|.   ...+.+++++....+..++|||++++.
T Consensus        41 ~~~l~gG~~n~~y~v~~~~~~~vl-K~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~  116 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLINDEVQTVFV-KINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS  116 (312)
T ss_dssp             EEEECCSSSSEEEEEESSSCEEEE-EEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred             eEEeCCccceeeeEEEECCCeEEE-EeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence            456899999999999876666655 444332   2366889999998884   356778888887778899999999987


Q ss_pred             CH
Q 045067          144 NL  145 (347)
Q Consensus       144 ~L  145 (347)
                      .+
T Consensus       117 ~~  118 (312)
T 3jr1_A          117 KN  118 (312)
T ss_dssp             CC
T ss_pred             CC
Confidence            54


No 271
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.85  E-value=7.7e-05  Score=65.53  Aligned_cols=71  Identities=8%  Similarity=-0.055  Sum_probs=42.2

Q ss_pred             CCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCce-eeeeeeeeeCCccEEEEEeC-CCCC
Q 045067           67 RNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNV-LRLIGCCLEVEIPVLVFESA-EYGN  144 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~~g~  144 (347)
                      .+.|+.|....+|+.    +. +++|+........ -...+|+.+++.+....+ .+++++  +.+.-++++||+ +|.+
T Consensus        23 i~~l~gG~tN~~~~~----~~-~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~   94 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA----GD-LCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQT   94 (301)
T ss_dssp             CEEEESCSSEEEEEE----TT-EEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEE
T ss_pred             eeEcCCcccccccee----ee-EEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCcc
Confidence            567899999999998    44 4455544332111 223568888877742222 345544  344457899999 6544


Q ss_pred             H
Q 045067          145 L  145 (347)
Q Consensus       145 L  145 (347)
                      |
T Consensus        95 l   95 (301)
T 3dxq_A           95 M   95 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4


No 272
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.78  E-value=0.00087  Score=59.37  Aligned_cols=163  Identities=17%  Similarity=0.133  Sum_probs=87.3

Q ss_pred             ccccCHHHHHHHhccCCC-----CCeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCc--ee
Q 045067           49 IRSFSAKELERATNNYHY-----RNIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNN--VL  121 (347)
Q Consensus        49 ~~~~~~~e~~~~~~~~~~-----~~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv  121 (347)
                      ...++.+++......|..     ...++ |....||+...+++..+|+|....... ..+.+..|..+++.+....  +.
T Consensus         8 ~~~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp   85 (328)
T 1zyl_A            8 FQTLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVA   85 (328)
T ss_dssp             CCCCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBC
T ss_pred             CCCCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeec
Confidence            444666666665555532     23466 788899998775554455555543221 2256777888888774222  33


Q ss_pred             eeeee-----eeeCCccEEEEEeCCCCCHH-----H------H---HhhhccC----CCCCCCHHHH-------------
Q 045067          122 RLIGC-----CLEVEIPVLVFESAEYGNLH-----D------L---LKRSYQS----HSEPLLLKHR-------------  165 (347)
Q Consensus       122 ~l~~~-----~~~~~~~~lv~e~~~~g~L~-----~------~---l~~~~~~----~~~~l~~~~~-------------  165 (347)
                      +++..     ...++..++++|+++|.++.     .      .   ++.....    ....+++...             
T Consensus        86 ~~~~~~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  165 (328)
T 1zyl_A           86 APVAFNGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL  165 (328)
T ss_dssp             CCCCBTTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred             ceeecCCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence            44432     12244567899999874331     1      1   1111000    0111222111             


Q ss_pred             ---------HHHHHHHHHHHHHhhc-CCCCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          166 ---------LKIAMEIANVFAYLHI-GFSRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       166 ---------~~i~~~i~~~l~~lH~-~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                               ...+..++..+.-+-. .....++|||+++.||+++ + .+.++||+.+..
T Consensus       166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~  223 (328)
T 1zyl_A          166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN  223 (328)
T ss_dssp             SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence                     1112222222222210 1156789999999999998 4 899999987643


No 273
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.62  E-value=0.00061  Score=60.62  Aligned_cols=33  Identities=15%  Similarity=0.107  Sum_probs=28.2

Q ss_pred             CCCeEeccCCCCCeEECCC----CceEEecCCCCccC
Q 045067          184 SRPIVFRDLKSSYILVSER----YVPKLFNFSLSASI  216 (347)
Q Consensus       184 ~~~ivH~dlkp~Nill~~~----~~~kl~Dfg~a~~~  216 (347)
                      ...++|||+.+.||+++.+    +.+.|+||+.+...
T Consensus       182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            5689999999999999874    67899999987543


No 274
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.56  E-value=0.0031  Score=55.61  Aligned_cols=159  Identities=12%  Similarity=0.059  Sum_probs=84.0

Q ss_pred             cCHHHHHHHhccCCCC-----CeecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCc--eeeee
Q 045067           52 FSAKELERATNNYHYR-----NIITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNN--VLRLI  124 (347)
Q Consensus        52 ~~~~e~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~  124 (347)
                      ++.+++......|...     +.|+.|....+|+...+++.++ +|+.....  ..+.+..|+.++..+....  +.+++
T Consensus         7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~v-lk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~   83 (322)
T 2ppq_A            7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLI-LTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPL   83 (322)
T ss_dssp             CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEE-EEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBC
T ss_pred             CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEE-EEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence            5666777766666542     3456688889999988666554 55544321  1244667888877764222  23333


Q ss_pred             ee------eeeCCccEEEEEeCCCCCHHH--------------HHhhhccC---CC-CCC---CHHHHHH----------
Q 045067          125 GC------CLEVEIPVLVFESAEYGNLHD--------------LLKRSYQS---HS-EPL---LLKHRLK----------  167 (347)
Q Consensus       125 ~~------~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~~~---~~-~~l---~~~~~~~----------  167 (347)
                      ..      ....+..++++++++|..+..              .++.....   .. ...   .|.....          
T Consensus        84 ~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~  163 (322)
T 2ppq_A           84 PRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVE  163 (322)
T ss_dssp             CBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTS
T ss_pred             CCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhh
Confidence            21      122355689999998754311              11111000   00 001   1211100          


Q ss_pred             --HHHHHHHHHHHhhc----CCCCCeEeccCCCCCeEECCCCceEEecCCCC
Q 045067          168 --IAMEIANVFAYLHI----GFSRPIVFRDLKSSYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       168 --i~~~i~~~l~~lH~----~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a  213 (347)
                        +...+...+..+..    ....+++|+|+.+.||+++.+..+.|+||+.+
T Consensus       164 ~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a  215 (322)
T 2ppq_A          164 KGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFA  215 (322)
T ss_dssp             TTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTC
T ss_pred             hhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhc
Confidence              00112333444431    12457999999999999988766689999866


No 275
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.43  E-value=0.00082  Score=55.32  Aligned_cols=101  Identities=16%  Similarity=0.137  Sum_probs=65.2

Q ss_pred             CCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCccCCCCCce
Q 045067          143 GNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSASIPEGETY  222 (347)
Q Consensus       143 g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~  222 (347)
                      -+|.+.|...    +.++++.+++.++.|.+.+|.-+-.  ...-..+=+.|..|++..+|.+.+.+ +.+.        
T Consensus        33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~--~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------   97 (229)
T 2yle_A           33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAAR--RRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------   97 (229)
T ss_dssp             EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHH--TTCCCCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred             ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhh--cccCCceecCCcceEEecCCceeccc-cccc--------
Confidence            4899999874    4889999999999999999877621  11111222346889999999988764 1110        


Q ss_pred             eeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcC
Q 045067          223 IDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTG  264 (347)
Q Consensus       223 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g  264 (347)
                           .....+.|||... ...+.+.=|||+|+++|.-+-.|
T Consensus        98 -----~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDyg  133 (229)
T 2yle_A           98 -----AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYG  133 (229)
T ss_dssp             --------------CCSS-SSSCHHHHHHHHHHHHHHHHTTT
T ss_pred             -----ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcC
Confidence                 1223456888653 34467888999999999998333


No 276
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.39  E-value=0.00073  Score=61.26  Aligned_cols=143  Identities=13%  Similarity=0.083  Sum_probs=80.4

Q ss_pred             CCeecccCceEEEEEEeCC--------ceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeeCCccEEEE
Q 045067           67 RNIITESSIFRLCQGVLPD--------RTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~--------~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .+.|..|-...+|+....+        +..+++|+..... .......+|..+++.+. +.-..++++++.+    .+|+
T Consensus        55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~  129 (379)
T 3feg_A           55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE  129 (379)
T ss_dssp             CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred             EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence            3567778888999998742        3456667654322 22355678999998884 3223556666543    3899


Q ss_pred             EeCCCCCHHH--------------HHhhhccC---CCCCC--CHHHHHHHHHHHHH-------------------HHHH-
Q 045067          138 ESAEYGNLHD--------------LLKRSYQS---HSEPL--LLKHRLKIAMEIAN-------------------VFAY-  178 (347)
Q Consensus       138 e~~~~g~L~~--------------~l~~~~~~---~~~~l--~~~~~~~i~~~i~~-------------------~l~~-  178 (347)
                      ||++|.+|..              .+.+-...   .....  .+.++.++..++..                   .+.. 
T Consensus       130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L  209 (379)
T 3feg_A          130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL  209 (379)
T ss_dssp             ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred             EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence            9998754431              11111010   01112  24455555544321                   1222 


Q ss_pred             ---hhc-CCCCCeEeccCCCCCeEECCC----CceEEecCCCCc
Q 045067          179 ---LHI-GFSRPIVFRDLKSSYILVSER----YVPKLFNFSLSA  214 (347)
Q Consensus       179 ---lH~-~~~~~ivH~dlkp~Nill~~~----~~~kl~Dfg~a~  214 (347)
                         |.. .....++|+|+.+.||+++.+    +.+.++||..+.
T Consensus       210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~  253 (379)
T 3feg_A          210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS  253 (379)
T ss_dssp             HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred             HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence               221 124579999999999999876    789999998773


No 277
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.37  E-value=0.00056  Score=63.24  Aligned_cols=72  Identities=11%  Similarity=-0.044  Sum_probs=46.8

Q ss_pred             CCeecccCceEEEEEEeCC--------ceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCce-eeeeeeeeeCCccEEEE
Q 045067           67 RNIITESSIFRLCQGVLPD--------RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNV-LRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~--------~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~  137 (347)
                      .+.|+.|....+|+...++        +..+++|+......  .+.+.+|..+++.+...++ .++++.+.+    .+|+
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~  151 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE  151 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence            4567888889999998742        35566776643211  1455689999988853333 466665432    3899


Q ss_pred             EeCCCCC
Q 045067          138 ESAEYGN  144 (347)
Q Consensus       138 e~~~~g~  144 (347)
                      ||++|.+
T Consensus       152 e~l~G~~  158 (429)
T 1nw1_A          152 EYIPSRP  158 (429)
T ss_dssp             CCCCEEE
T ss_pred             EEeCCcc
Confidence            9998633


No 278
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.35  E-value=0.0011  Score=61.80  Aligned_cols=74  Identities=8%  Similarity=-0.089  Sum_probs=45.8

Q ss_pred             CCeecccCceEEEEEEeCC-ceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCce-eeeeeeeeeCCccEEEEEeCCCCC
Q 045067           67 RNIITESSIFRLCQGVLPD-RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNV-LRLIGCCLEVEIPVLVFESAEYGN  144 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~-~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~g~  144 (347)
                      .+.|+.|-...+|+...++ +..+++|+........ -...+|..+++.+...++ .++++.+.  +  .+|+||++|.+
T Consensus       113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~  187 (458)
T 2qg7_A          113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA  187 (458)
T ss_dssp             EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred             EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence            3567788889999998855 4556667664432211 112589999998864444 46666653  2  35999998744


Q ss_pred             H
Q 045067          145 L  145 (347)
Q Consensus       145 L  145 (347)
                      |
T Consensus       188 l  188 (458)
T 2qg7_A          188 L  188 (458)
T ss_dssp             C
T ss_pred             C
Confidence            3


No 279
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=97.20  E-value=0.00084  Score=60.67  Aligned_cols=72  Identities=14%  Similarity=-0.006  Sum_probs=42.7

Q ss_pred             CeecccCceEEEEEEeCC---------ceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCc-eeeeeeeeeeCCccEEEE
Q 045067           68 NIITESSIFRLCQGVLPD---------RTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNN-VLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        68 ~~lg~G~~g~Vy~~~~~~---------~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~  137 (347)
                      +.|+.|....+|+...++         +..+++|+........ ....+|..+++.+...+ +.++++..  .  -++|+
T Consensus        39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~-~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~  113 (369)
T 3c5i_A           39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDEL-YNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE  113 (369)
T ss_dssp             EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGT-SCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccce-ecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence            457788888999998753         1466777765543221 22467888888774333 33555443  2  37899


Q ss_pred             EeCCCCC
Q 045067          138 ESAEYGN  144 (347)
Q Consensus       138 e~~~~g~  144 (347)
                      ||++|.+
T Consensus       114 e~i~G~~  120 (369)
T 3c5i_A          114 EWLYGDP  120 (369)
T ss_dssp             ECCCSEE
T ss_pred             EEecCCc
Confidence            9998744


No 280
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.04  E-value=0.0049  Score=54.92  Aligned_cols=32  Identities=9%  Similarity=0.168  Sum_probs=27.9

Q ss_pred             CCCeEeccCCCCCeEECCCCceEEecCCCCcc
Q 045067          184 SRPIVFRDLKSSYILVSERYVPKLFNFSLSAS  215 (347)
Q Consensus       184 ~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~~  215 (347)
                      ...++|+|+.+.||+++.++.+.++||+.+..
T Consensus       205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~  236 (339)
T 3i1a_A          205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML  236 (339)
T ss_dssp             GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred             CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence            45799999999999999888899999987644


No 281
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=97.02  E-value=0.0026  Score=57.96  Aligned_cols=143  Identities=14%  Similarity=0.048  Sum_probs=80.4

Q ss_pred             CCeecccCceEEEEEEeCC--------ceEEEEEEccCCCch-----------h-------HHHHHHHHHHHHhcC-CCc
Q 045067           67 RNIITESSIFRLCQGVLPD--------RTISVVKFIDGSVFD-----------A-------YDCCFNNIVFASQMS-HNN  119 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~--------~~~~v~k~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~n  119 (347)
                      .+.|..|-...+|+...++        ...+++++....+..           +       .+....|..+++.+. +.-
T Consensus        57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi  136 (401)
T 3f2s_A           57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL  136 (401)
T ss_dssp             EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred             EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence            3466678888999988743        256777776543221           0       112335888888885 333


Q ss_pred             eeeeeeeeeeCCccEEEEEeCCCCCHHH--------------HHhhhccC---CCCCCC--HHHHHHHHHHHH-------
Q 045067          120 VLRLIGCCLEVEIPVLVFESAEYGNLHD--------------LLKRSYQS---HSEPLL--LKHRLKIAMEIA-------  173 (347)
Q Consensus       120 iv~l~~~~~~~~~~~lv~e~~~~g~L~~--------------~l~~~~~~---~~~~l~--~~~~~~i~~~i~-------  173 (347)
                      ..++++++.+    .+++||++|-+|..              .+.+-...   ......  +....++..++.       
T Consensus       137 ~Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~  212 (401)
T 3f2s_A          137 GPKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEE  212 (401)
T ss_dssp             SCCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSH
T ss_pred             CCeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcch
Confidence            4566776543    28999998744321              11111010   011122  233334433321       


Q ss_pred             ---------------HHH----HHhhc-CCCCCeEeccCCCCCeEECCC------CceEEecCCCC
Q 045067          174 ---------------NVF----AYLHI-GFSRPIVFRDLKSSYILVSER------YVPKLFNFSLS  213 (347)
Q Consensus       174 ---------------~~l----~~lH~-~~~~~ivH~dlkp~Nill~~~------~~~kl~Dfg~a  213 (347)
                                     .-+    .+|.. .....++|+|+.+.||+++.+      +.+.++||..+
T Consensus       213 ~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a  278 (401)
T 3f2s_A          213 SRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYS  278 (401)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTC
T ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccC
Confidence                           111    22221 224578999999999999876      78999999876


No 282
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=96.45  E-value=0.021  Score=52.42  Aligned_cols=74  Identities=11%  Similarity=-0.109  Sum_probs=46.2

Q ss_pred             CCeecccCceEEEEEEeCC--------ceEEEEEEccCCCchhHHHHHHHHHHHHhcC-CCceeeeeeeeeeCCccEEEE
Q 045067           67 RNIITESSIFRLCQGVLPD--------RTISVVKFIDGSVFDAYDCCFNNIVFASQMS-HNNVLRLIGCCLEVEIPVLVF  137 (347)
Q Consensus        67 ~~~lg~G~~g~Vy~~~~~~--------~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~lv~  137 (347)
                      .+.|..|-...+|+...++        +..+++|+........ -...+|..+++.+. +.-..++++.+  .  -++|+
T Consensus        75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~  149 (424)
T 3mes_A           75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIADF--P--EGRIE  149 (424)
T ss_dssp             EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred             EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEE
Confidence            3567778888999998852        3556667665443221 22457888888874 22234555433  2  37899


Q ss_pred             EeCCCCCH
Q 045067          138 ESAEYGNL  145 (347)
Q Consensus       138 e~~~~g~L  145 (347)
                      ||++|.+|
T Consensus       150 efI~G~~l  157 (424)
T 3mes_A          150 EFIDGEPL  157 (424)
T ss_dssp             ECCCSEEC
T ss_pred             EEeCCccC
Confidence            99998553


No 283
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.28  E-value=0.065  Score=48.80  Aligned_cols=29  Identities=28%  Similarity=0.371  Sum_probs=24.5

Q ss_pred             CeEeccCCCCCeEE------CCCCceEEecCCCCc
Q 045067          186 PIVFRDLKSSYILV------SERYVPKLFNFSLSA  214 (347)
Q Consensus       186 ~ivH~dlkp~Nill------~~~~~~kl~Dfg~a~  214 (347)
                      .++|+|+.+.||++      +++..+.++||..|.
T Consensus       245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE
T ss_pred             eeEEecCCCCeEEEecCcccCcCCeEEEechHhcc
Confidence            46799999999999      456779999999874


No 284
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.88  E-value=1.9  Score=35.32  Aligned_cols=83  Identities=6%  Similarity=0.031  Sum_probs=59.6

Q ss_pred             CCCceeeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHH-HhhcCCCCCeEeccCCC
Q 045067          116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFA-YLHIGFSRPIVFRDLKS  194 (347)
Q Consensus       116 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~-~lH~~~~~~ivH~dlkp  194 (347)
                      .||++  -..+-.+++.+.+.++.-+++.=+..+        ..++...+++++..++.... +++     .-.|--+.|
T Consensus        48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i--------~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P  112 (219)
T 4ano_A           48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI--------RKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCP  112 (219)
T ss_dssp             SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH--------HTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCG
T ss_pred             cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH--------HhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeC
Confidence            57777  334445667777777766544333344        35788899999999887666 454     346777999


Q ss_pred             CCeEECCCCceEEecCCCC
Q 045067          195 SYILVSERYVPKLFNFSLS  213 (347)
Q Consensus       195 ~Nill~~~~~~kl~Dfg~a  213 (347)
                      +|++++.++.+++.-.|+-
T Consensus       113 ~NL~f~~~~~p~i~hRGi~  131 (219)
T 4ano_A          113 ENLMFNRALEPFFLHVGVK  131 (219)
T ss_dssp             GGEEECTTCCEEESCCEET
T ss_pred             ceEEEeCCCcEEEEEcCCc
Confidence            9999999999999877753


No 285
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=85.72  E-value=0.11  Score=48.24  Aligned_cols=61  Identities=2%  Similarity=-0.148  Sum_probs=16.6

Q ss_pred             CCCeecccCceEEEEEEeCC--ceEEE------EEEccCC-CchhHHHHHHHHHHHHhcCCCceeeeeeeeee
Q 045067           66 YRNIITESSIFRLCQGVLPD--RTISV------VKFIDGS-VFDAYDCCFNNIVFASQMSHNNVLRLIGCCLE  129 (347)
Q Consensus        66 ~~~~lg~G~~g~Vy~~~~~~--~~~~v------~k~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~  129 (347)
                      ..+.||   ||.||+|.+.+  .+||+      |+..... .......+.+|..++..++|||+++.+++...
T Consensus       146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~  215 (463)
T 3cxl_A          146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH  215 (463)
T ss_dssp             STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred             ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence            345565   99999999943  45655      4433322 12233568889999999999999999887653


No 286
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=83.99  E-value=1.4  Score=36.05  Aligned_cols=117  Identities=9%  Similarity=0.063  Sum_probs=75.5

Q ss_pred             CCCceeeeeeeeeeCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHHhhcCCCCCeEeccCCCC
Q 045067          116 SHNNVLRLIGCCLEVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAYLHIGFSRPIVFRDLKSS  195 (347)
Q Consensus       116 ~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~dlkp~  195 (347)
                      .||+.+.. .+-.+++.+.+.++.-+  +..++-.-      ..++...+++++..|+....+++     .=.|--+.|+
T Consensus        43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~i------k~~~~~eKlr~l~ni~~l~~~~~-----~r~tf~L~P~  108 (215)
T 4ann_A           43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNI------KSFTKNEKLRYLLNIKNLEEVNR-----TRYTFVLAPD  108 (215)
T ss_dssp             CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGG------GGSCHHHHHHHHHHGGGGGGGGG-----SSEECCCSGG
T ss_pred             cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHH------HhcCHHHHHHHHHHHHHHHHHhc-----CceEEEEecc
Confidence            58888765 45555566555555544  22222221      45788999999999988776655     2367779999


Q ss_pred             CeEECCCCceEEecCCCCccCCCCCceeeccccccCCcccccccccCCCCCccchHHHHHHHHHHHhcCCCcccc
Q 045067          196 YILVSERYVPKLFNFSLSASIPEGETYIDDGVKGTSGIVAPEYARTGYLNEKCDVYSFGLLLLQLLSTGEDLFNM  270 (347)
Q Consensus       196 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~el~~~g~~p~~~  270 (347)
                      |++++.++.+++.--|+...+                  +|.-     .+...=.-.+=+++..++ .++..|..
T Consensus       109 NL~f~~~~~p~i~~RGik~~l------------------~P~~-----~~ee~fL~qyKAliiall-~~K~~Fe~  159 (215)
T 4ann_A          109 ELFFTRDGLPIAKTRGLQNVV------------------DPLP-----VSEAEFLTRYKALVICAF-NEKQSFDA  159 (215)
T ss_dssp             GEEECTTSCEEESCCEETTTB------------------SCCC-----CCHHHHHHHHHHHHHHHH-CTTCCHHH
T ss_pred             eEEEcCCCCEEEEEccCccCC------------------CCCC-----CCHHHHHHHHHHHHHHHH-cCCCCHHH
Confidence            999999999999877653222                  2210     111122335667788888 88777764


No 287
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=65.55  E-value=0.53  Score=43.89  Aligned_cols=29  Identities=10%  Similarity=-0.127  Sum_probs=25.2

Q ss_pred             HHHHHHHHHHHHhcCCCceeeeeeeeeeC
Q 045067          102 YDCCFNNIVFASQMSHNNVLRLIGCCLEV  130 (347)
Q Consensus       102 ~~~~~~E~~~l~~l~h~niv~l~~~~~~~  130 (347)
                      .++|..|++.+.+++|+|+|++.|||...
T Consensus       323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~  351 (487)
T 3oja_A          323 SETERLECERENQARQREIDALKEQYRTV  351 (487)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence            46799999999999999999999999764


No 288
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=51.94  E-value=1.6e+02  Score=27.96  Aligned_cols=46  Identities=13%  Similarity=0.068  Sum_probs=33.0

Q ss_pred             HHHHHHHHHHHHH--HHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          162 LKHRLKIAMEIAN--VFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       162 ~~~~~~i~~~i~~--~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      +..+..++..+|.  -+.|+=   .-    ||=.++|||++.+|++.-+|||.+-
T Consensus       454 ~~a~~nF~~S~A~ySvv~YIL---Gi----gDRH~~NILld~tG~v~HIDFG~~f  501 (614)
T 3ls8_A          454 AEVMDTYVKSCAGYCVITYIL---GV----GDRHLDNLLLTKTGKLFHIDFGYIL  501 (614)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH---TC----CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred             HHHHHHHHHHHHHHhHhheee---ec----cCCCCcceeEcCCCCEeeeehHHhh
Confidence            4556666666553  345554   22    3667899999999999999999873


No 289
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=41.15  E-value=16  Score=35.38  Aligned_cols=45  Identities=16%  Similarity=0.058  Sum_probs=31.8

Q ss_pred             HHHHHHHHHHH--HHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          163 KHRLKIAMEIA--NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       163 ~~~~~i~~~i~--~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      ..+..++..+|  +-+.|+=   ..    ||=.++|||++.+|++.-+|||.+-
T Consensus       529 ~ar~nF~~SlA~~Svv~YIL---Gl----GDRH~~NILid~tG~v~HIDFG~~f  575 (696)
T 2x6h_A          529 EVMDTYIKSCAGYCVITYLL---GV----GDRHLDNLLLTTNGKLFHIDFGYIL  575 (696)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred             HHHHHHHHHHHHHHHHHHHc---cC----CCCCCcceEEeCCCCEEEEeehhhh
Confidence            34555655554  2345554   22    4778899999999999999999863


No 290
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=39.47  E-value=88  Score=27.27  Aligned_cols=136  Identities=13%  Similarity=-0.001  Sum_probs=65.4

Q ss_pred             ecccCceEEEEEEeCCceEEEEEEccCCCchhHHHHHHHHHHHHhcCCCceeeeeee-------------ee--------
Q 045067           70 ITESSIFRLCQGVLPDRTISVVKFIDGSVFDAYDCCFNNIVFASQMSHNNVLRLIGC-------------CL--------  128 (347)
Q Consensus        70 lg~G~~g~Vy~~~~~~~~~~v~k~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~-------------~~--------  128 (347)
                      .-.|. +.||.+..+ +..+|+|..   +....+.+-.++...-.+..|+..-+.-.             +.        
T Consensus        77 s~~Gs-tgvff~~td-~~~~VVK~s---~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l~~  151 (342)
T 1cja_A           77 SEKGT-EGLFFVETE-SGVFIVKRS---TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVITT  151 (342)
T ss_dssp             CCSTT-SCEEEEEES-SCEEEEECC---TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHHHH
T ss_pred             ccCCC-CCeEEEEeC-CCEEEEeCc---HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHHHH
Confidence            34454 445555555 445555533   12233445555555555666664322211             00        


Q ss_pred             -eCCccEEEEEeCCCCCHHHHHhhhccCCCCCCCHHHHHHHHHHHHHHHHH-hhcCCCCCeEe-ccCCCCCeEECCCCc-
Q 045067          129 -EVEIPVLVFESAEYGNLHDLLKRSYQSHSEPLLLKHRLKIAMEIANVFAY-LHIGFSRPIVF-RDLKSSYILVSERYV-  204 (347)
Q Consensus       129 -~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~-lH~~~~~~ivH-~dlkp~Nill~~~~~-  204 (347)
                       ..+...++|||.+|..|.+.-...   ....+....... +-. +-+++. +++.+..+.+. .--.|+|||++.++. 
T Consensus       152 l~~~~~~l~meyv~G~~L~e~~~~~---~~~~f~~~~~k~-LG~-Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~  226 (342)
T 1cja_A          152 LANQANILLMELVRGITLNKLTTTS---APEVLTKSTMQQ-LGS-LMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGAT  226 (342)
T ss_dssp             HTTCSEEEEEECCCEEESTTCCSSS---HHHHSCHHHHHH-HHH-HHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTC
T ss_pred             hhcccceehhhhcCCCccccchhhh---hhhhcCHHHHHh-hch-hheehhhhcCCccCcccccCCCChhheEEeCCCCe
Confidence             012456999999876554321110   001122222221 111 223333 45444333333 124688999987554 


Q ss_pred             eEEecCCCCcc
Q 045067          205 PKLFNFSLSAS  215 (347)
Q Consensus       205 ~kl~Dfg~a~~  215 (347)
                      +.++|-+.+..
T Consensus       227 ~~~IDhn~af~  237 (342)
T 1cja_A          227 VVPIDSKIIPL  237 (342)
T ss_dssp             EEECSCCCCCC
T ss_pred             EEEEcCCcccc
Confidence            88899887744


No 291
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=28.53  E-value=33  Score=35.13  Aligned_cols=25  Identities=20%  Similarity=0.101  Sum_probs=22.4

Q ss_pred             ccCCCCCeEECCCCceEEecCCCCc
Q 045067          190 RDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       190 ~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      ||=.++|||++.+|++.-+|||.+-
T Consensus       940 GDRH~~NILid~tG~v~HIDFG~~f  964 (1092)
T 2y3a_A          940 GDRHSDNIMVKKTGQLFHIDFGHIL  964 (1092)
T ss_dssp             CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred             CCCCCccEEEecCCCEEEEeehhhh
Confidence            4778899999999999999999763


No 292
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=26.95  E-value=53  Score=24.89  Aligned_cols=23  Identities=13%  Similarity=0.277  Sum_probs=20.0

Q ss_pred             cCCCCCCCCHHHHHHHHHHHHHh
Q 045067          324 SASAEDRPTMIDVAKQIKKMYKS  346 (347)
Q Consensus       324 ~~~P~~RPs~~ell~~L~~i~~~  346 (347)
                      ..+|..||+++++++.|+++..+
T Consensus       139 ~~~~~~~~~~~eil~~l~~l~~e  161 (164)
T 4gqc_A          139 TDNPLNEPDYDEVVREANKIAGE  161 (164)
T ss_dssp             CSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             eCCCCCCCCHHHHHHHHHHHhcc
Confidence            46789999999999999998765


No 293
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=25.20  E-value=28  Score=35.10  Aligned_cols=25  Identities=20%  Similarity=0.111  Sum_probs=22.2

Q ss_pred             ccCCCCCeEECCCCceEEecCCCCc
Q 045067          190 RDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       190 ~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      ||=.++|||++.+|++.-+|||.+-
T Consensus       788 gDRH~~NILid~tG~v~HIDFG~~f  812 (940)
T 2wxf_A          788 GDRHSDNIMIRESGQLFHIDFGHFL  812 (940)
T ss_dssp             CCCCGGGEEEETTSCEEECCCCCCT
T ss_pred             CCCCcccEEEecCCCEEEEeehhhh
Confidence            4777899999999999999999763


No 294
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=23.70  E-value=32  Score=34.80  Aligned_cols=25  Identities=20%  Similarity=0.130  Sum_probs=21.8

Q ss_pred             ccCCCCCeEECCCCceEEecCCCCc
Q 045067          190 RDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       190 ~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      ||=.++|||++.+|++.-+|||.+-
T Consensus       804 gDRH~~NILid~tG~v~HIDFG~~f  828 (961)
T 1e7u_A          804 GDRHNDNIMISETGNLFHIDFGHIL  828 (961)
T ss_dssp             CCCCGGGEEEETTCCEEECCCCCC-
T ss_pred             cCCCCcceEEecCCCEEEEeehhhh
Confidence            4777899999999999999999874


No 295
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=20.10  E-value=55  Score=33.48  Aligned_cols=47  Identities=15%  Similarity=0.068  Sum_probs=31.9

Q ss_pred             CHHHH-HHHHHHHH--HHHHHhhcCCCCCeEeccCCCCCeEECCCCceEEecCCCCc
Q 045067          161 LLKHR-LKIAMEIA--NVFAYLHIGFSRPIVFRDLKSSYILVSERYVPKLFNFSLSA  214 (347)
Q Consensus       161 ~~~~~-~~i~~~i~--~~l~~lH~~~~~~ivH~dlkp~Nill~~~~~~kl~Dfg~a~  214 (347)
                      .+..+ ..++..+|  +-+.|+=   .-    ||=.++|||++.+|++.-+|||.+-
T Consensus       912 ~~~~ar~nF~~S~A~ysvv~YiL---gi----gDRH~~NILid~tG~v~HIDFG~~f  961 (1091)
T 3hhm_A          912 IYDAAIDLFTRSCAGYCVATFIL---GI----GDRHNSNIMVKDDGQLFHIDFGHFL  961 (1091)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHH---TC----CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred             HHHHHHHHHHHHhhhhhheEEEE---ee----cCCCCcceEEeCCCCEEEEeehhhh
Confidence            44433 45555554  2345554   22    4667899999999999999999873


Done!