BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045069
(554 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118488703|gb|ABK96162.1| unknown [Populus trichocarpa]
Length = 553
Score = 721 bits (1860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/550 (64%), Positives = 426/550 (77%), Gaps = 1/550 (0%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
M L L+LSK+HQ+LSRTK+LHALV K LL+DPFYATKLVR YALNN L SAR L
Sbjct: 1 MLIKFQSLFLQLSKTHQTLSRTKQLHALVTKTHLLQDPFYATKLVRFYALNNDLSSARNL 60
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FDKTPQRSVFLWNSIIRAYA AH+F+DA L+ ++ + PD +TYAC+ RAC E+ +
Sbjct: 61 FDKTPQRSVFLWNSIIRAYAQAHKFDDAFLLYTKMIGFDVIPDKYTYACLIRACCEDFYV 120
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
GLR VHGG IVSGLG DS+T SALVT YSK+ L+ EA KVF GV +PDLVL N+MISG
Sbjct: 121 DGLRIVHGGVIVSGLGLDSVTCSALVTGYSKMGLVGEASKVFCGVFEPDLVLWNAMISGC 180
Query: 181 AHCGFWDKSLQLFDWMLRLG-KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+CGF DK L F+ M G K PD YT V LISGL S L +GQGIHG CLKS FD
Sbjct: 181 GYCGFGDKGLLFFNEMRDNGNKRPDGYTFVALISGLANSSSLELGQGIHGLCLKSGFDCN 240
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
D+V S LVSMY+R +C+N AY VF SL PDLVTWSALITG+SQ G++ KAL +++ LN+
Sbjct: 241 DHVGSSLVSMYSRFSCINLAYSVFRSLCQPDLVTWSALITGFSQAGEHEKALLFYKNLNL 300
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
GKK D VLIASVL A A+ ANV PGA IHGY++++GFE VMVSSAL+DMYSKCG++GL
Sbjct: 301 AGKKPDSVLIASVLVATAQLANVGPGAQIHGYIVRYGFESHVMVSSALIDMYSKCGFVGL 360
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
G++VFE M RNI++YNS+I GLGLHG QAF+ F +I+EKGL PDESTFSALLCACCH
Sbjct: 361 GLRVFENMPNRNIVSYNSIISGLGLHGLASQAFDMFTEIVEKGLKPDESTFSALLCACCH 420
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV DGREIF RM +E+ IQA+TEHY+++VKLLG+AG L+EAY+FI SL +PVD + G
Sbjct: 421 AGLVKDGREIFRRMKDEFWIQARTEHYVHIVKLLGMAGELDEAYNFILSLKQPVDSGIWG 480
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
ALLSCC +G+S+LAEIVA QLF+ +P+KGAY+VMLSN YA DGRW DV K+RD I G
Sbjct: 481 ALLSCCDAHGDSELAEIVAQQLFDGEPKKGAYRVMLSNVYAGDGRWVDVEKMRDYITTAG 540
Query: 540 LRKEAGVSWV 549
K G+S +
Sbjct: 541 AEKMPGLSRI 550
>gi|225456926|ref|XP_002278116.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Vitis vinifera]
Length = 560
Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/542 (64%), Positives = 438/542 (80%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+ ELSK HQ+L RTK+LHA + + L DPFYAT+++R YA+N+ L SAR LFD T R
Sbjct: 14 LLFELSKIHQTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSYR 73
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
SV+LWNS+IRAYA H+F+DA LF +LRT++KPD+FT+AC+ RAC+EN D GLR VH
Sbjct: 74 SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVH 133
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
GG +VSGLG DS+ SALVTAYSKL ++DEA +VF G+++PDLVL N+M +G+ +CGFWD
Sbjct: 134 GGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEPDLVLWNAMAAGYGYCGFWD 193
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K LQLF M +G+ PD YT+VGLISGL +PSLL +G+GIHGFCLKSSFD D+V S LV
Sbjct: 194 KGLQLFSAMRSMGEQPDSYTMVGLISGLADPSLLGIGKGIHGFCLKSSFDCNDHVGSALV 253
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
SMY+RC+C+NSAY VF L PDLVTWSALITG S+ GDY KAL +FRK+NM+GK+ DP+
Sbjct: 254 SMYSRCHCLNSAYGVFTILSQPDLVTWSALITGLSKSGDYEKALLFFRKMNMEGKRVDPI 313
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
LIASVLAA+ +SA + PG+ IHGYV++HG E VM+SSAL+DMYSKCG++ LG++VF++M
Sbjct: 314 LIASVLAASGQSAILGPGSEIHGYVLRHGLESEVMISSALIDMYSKCGFVNLGVRVFDSM 373
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
RN ++YNS+ILGLG+HG QAF+ F +++EKG PDESTFSALLC CCH GLV +GR
Sbjct: 374 PNRNTVSYNSMILGLGIHGLAPQAFKMFEEVLEKGFKPDESTFSALLCTCCHAGLVKNGR 433
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
EIF+RMTEE+ IQA+T+HY++MVKLLG+AG L+EAY I SL +PVD + GALLSCC+
Sbjct: 434 EIFSRMTEEFHIQARTDHYVHMVKLLGMAGELQEAYDLILSLQQPVDSGIWGALLSCCNF 493
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+GN +LAEIVA QLFEN P K AY+VMLSN YA D RWDDV KLRDDI + G++K G+S
Sbjct: 494 HGNPELAEIVAQQLFENKPEKSAYRVMLSNIYAGDDRWDDVKKLRDDIQEAGIKKMPGLS 553
Query: 548 WV 549
W+
Sbjct: 554 WI 555
>gi|147834109|emb|CAN62187.1| hypothetical protein VITISV_003709 [Vitis vinifera]
Length = 560
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/542 (63%), Positives = 435/542 (80%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+ ELSK HQSL RTK+LHA + + L DPFYAT+++R YA+N+ L SAR LFD T R
Sbjct: 14 LLFELSKIHQSLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSHR 73
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
SV+LWNS+IRAYA H+F+DA LF +LRT++KPD+FT+AC+ RAC+EN D GLR VH
Sbjct: 74 SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVH 133
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
GG +VSGLG DS+ SALVTAYSKL ++DEA +VF G+++ DLVL N+M +G+ +CGFWD
Sbjct: 134 GGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEQDLVLWNAMAAGYGYCGFWD 193
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K LQLF M +G+ PD YT+VGLISGL +P+LL +G+GIHGFCLKSSFD +V S LV
Sbjct: 194 KGLQLFSAMRSMGEQPDSYTMVGLISGLADPNLLGIGKGIHGFCLKSSFDCNAHVGSALV 253
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
SMY+RC+C+NSAY VF L PDLVTWSALITG S+ GDY KAL +FRK+NM+GK+ DP+
Sbjct: 254 SMYSRCHCLNSAYGVFTILSQPDLVTWSALITGLSKSGDYEKALLFFRKMNMEGKRVDPI 313
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
LI SVLAA+ +SA + PG+ IHGYV++HG E VM+SSAL+DMYSKCG++ LG++VF++M
Sbjct: 314 LIXSVLAASGQSAILGPGSEIHGYVLRHGLESEVMISSALIDMYSKCGFVNLGVRVFDSM 373
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
RN ++YNS+ILGLG+HG QAF+ F +++EKG PDESTFSALLC CCH GLVNDGR
Sbjct: 374 PNRNTVSYNSMILGLGIHGLAXQAFKMFEEVLEKGFKPDESTFSALLCTCCHAGLVNDGR 433
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
EIF+RMTEE+ IQA+TEHY++MVKLLG+AG L+EAY I SL +P D + GALLSCC+
Sbjct: 434 EIFSRMTEEFHIQARTEHYVHMVKLLGMAGELQEAYDLILSLQQPADSGIWGALLSCCNF 493
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+GNS+LA IVA QLFEN P K AY+VMLSN YA D RWDDV KLRDDI + G++K G+S
Sbjct: 494 HGNSELAXIVAQQLFENKPEKSAYRVMLSNIYAGDXRWDDVKKLRDDIQEAGIKKMPGLS 553
Query: 548 WV 549
W+
Sbjct: 554 WI 555
>gi|449440993|ref|XP_004138268.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Cucumis sativus]
gi|449523770|ref|XP_004168896.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Cucumis sativus]
Length = 549
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/549 (61%), Positives = 414/549 (75%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
M FNLH L ELSKS +L RTKELHA + K+ L DPFYAT++V+LY++N L AR L
Sbjct: 1 MSFNLHILTTELSKSFLTLLRTKELHAFITKSHLASDPFYATRIVKLYSINAKLGYARHL 60
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FDKTP RSV+LWNSIIRAYA A++F DA SLF + T+ PDNFTY+CI RACSEN
Sbjct: 61 FDKTPNRSVYLWNSIIRAYAKAYKFRDALSLFLTMSGTETSPDNFTYSCIIRACSENHHR 120
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
L+FVHG +V+G G D I SALVTAYS L LI+EA KVF + PDLV+ NS+I GF
Sbjct: 121 EWLKFVHGRVLVTGFGLDPICCSALVTAYSNLDLIEEASKVFGRIQHPDLVMWNSIICGF 180
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
CG+W++ L LF M LG+ PD YT+VG+ SG+ EPSLLS G+GIHG CLK +FDS +
Sbjct: 181 GSCGYWNQGLLLFSRMRNLGELPDGYTVVGVASGIAEPSLLSTGKGIHGLCLKCNFDSNE 240
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+V+S LVSMY+RCNCM+SAY VF+SL PDLVTWSALITGYSQ GD+ KA+ +F++LNMQ
Sbjct: 241 HVASALVSMYSRCNCMDSAYLVFSSLLQPDLVTWSALITGYSQAGDFRKAMLFFQRLNMQ 300
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
GKK D +LIAS+LAA A+S N+ G IHGYV++ G E + M+SS+L+DMYSKCGYL LG
Sbjct: 301 GKKMDSILIASILAATAQSTNIRHGIEIHGYVLRQGIESNEMISSSLIDMYSKCGYLSLG 360
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
I+VF MS++NI TYNSVI GLGLHG +A E F +++ GL P+ESTFSALL ACCH
Sbjct: 361 IRVFHVMSQKNISTYNSVIWGLGLHGLASKALEMFEELLTIGLVPNESTFSALLFACCHA 420
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GL + G+EIF RM +E+ I+ KTEHY+Y+VKLLG+ G LE AY+ + SLP+P D + GA
Sbjct: 421 GLNSVGKEIFKRMKDEFCIKYKTEHYVYIVKLLGMTGELEVAYNLVMSLPEPADSGIWGA 480
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLSCC GN +LAE+VA +L ENDP K YKVMLSN YA DGRWDDV KLRD + +
Sbjct: 481 LLSCCDACGNVELAEVVAQRLIENDPEKTVYKVMLSNIYAGDGRWDDVKKLRDTMTEKER 540
Query: 541 RKEAGVSWV 549
K G+SW+
Sbjct: 541 GKCPGLSWI 549
>gi|356518950|ref|XP_003528138.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Glycine max]
Length = 551
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/552 (59%), Positives = 405/552 (73%), Gaps = 1/552 (0%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
M +L EL+ +SL R K+LHA + K L +DPFYATK+VRLYA NN + SA L
Sbjct: 1 MLIPFEWLHCELNNICKSLLRAKQLHAFLLKTHLSQDPFYATKIVRLYAANNDINSAHHL 60
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FDKTP RSV+LWNS+IRA+A + RF +A SLF+ +L + PD TYAC+ RAC+ N D
Sbjct: 61 FDKTPNRSVYLWNSMIRAFAQSQRFFNAISLFRTMLGADISPDGHTYACVIRACANNFDF 120
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
LR VHGGA+ +GLGRD + SALV AYSKL L+ EA +VFDG+++PDLVL NS+ISG+
Sbjct: 121 GMLRRVHGGAVAAGLGRDPVCCSALVAAYSKLGLVHEARRVFDGIAEPDLVLWNSLISGY 180
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G WD +Q+F M G PD YTL GL+ G+ + +LS+GQG+H KS DS
Sbjct: 181 GGFGLWDVGMQMFSMMRLFGMKPDGYTLAGLLVGIADSGMLSIGQGLHCLSQKSGLDSDS 240
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+V S+L+SMY+RC M SAY VF S+ +PDLVTWSALI GYSQ G+Y K L +FRKLNM+
Sbjct: 241 HVGSLLLSMYSRCKHMASAYRVFCSILNPDLVTWSALIVGYSQSGEYEKVLLFFRKLNME 300
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
KK D VLIASVLA+ A+ ANV G +HGY ++HG EL V VSSALVDMYSKCG+L LG
Sbjct: 301 SKKPDSVLIASVLASIAQMANVGLGCEVHGYALRHGLELDVRVSSALVDMYSKCGFLHLG 360
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
I VF M ERNI+++NSVILG GLHG +AF F ++EKGL PDE+TFS+LLCACCH
Sbjct: 361 ICVFRVMPERNIVSFNSVILGFGLHGCASEAFRMFDKMLEKGLVPDEATFSSLLCACCHA 420
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV DGREIF RM E+ I+A+ EHY+YMVKLLG AG LEEAY+ SLP+PVD A+ GA
Sbjct: 421 GLVKDGREIFQRMKHEFNIRARPEHYVYMVKLLGSAGELEEAYNLTQSLPEPVDKAILGA 480
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLSCC+I GNS+LAE VAHQLFE+ P Y+VMLSN YA DGRWDDV KLRD++ G
Sbjct: 481 LLSCCNICGNSELAETVAHQLFESSPADNVYRVMLSNIYAGDGRWDDVKKLRDNMT-GGP 539
Query: 541 RKEAGVSWVSGS 552
RK G+SW+ GS
Sbjct: 540 RKMPGLSWIDGS 551
>gi|357461849|ref|XP_003601206.1| hypothetical protein MTR_3g077200 [Medicago truncatula]
gi|355490254|gb|AES71457.1| hypothetical protein MTR_3g077200 [Medicago truncatula]
Length = 553
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/552 (58%), Positives = 406/552 (73%), Gaps = 1/552 (0%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
M H+L EL+ +SL R K+LHA + K L +DPFYAT+++RLYA NN + A +
Sbjct: 1 MLTQFHWLHSELTNVCKSLLRVKQLHACLLKTHLSKDPFYATQIIRLYAFNNHINYAHHV 60
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FDKT RSVFLWNS+IRA+A A RF++A SLF+ +L ++PDN+TYAC RAC+++ D
Sbjct: 61 FDKTSTRSVFLWNSMIRAFAKARRFSNAISLFRTMLVDDIRPDNYTYACAIRACADSFDF 120
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
LR VHG A+ GLG D I SALV+AYSKL ++ EA +VFDG+ +PDLVL NS+IS +
Sbjct: 121 GMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAY 180
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G W+ +Q+F M GK PD +TL GL+ G+ + SLLS+GQ +HG KS DS
Sbjct: 181 GGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDC 240
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+V S+LVSMY+RC C++SAY VF +F+PDLVTWSALI+GYSQ G+Y KAL +FRKLNM+
Sbjct: 241 HVGSLLVSMYSRCKCIDSAYRVFCGIFNPDLVTWSALISGYSQCGEYQKALLFFRKLNMK 300
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
KK D VLIA+VLA+ + ANV PG IHGYV++HG E V VSSAL+DMYSKCG+L LG
Sbjct: 301 SKKLDSVLIATVLASITQMANVLPGCEIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLG 360
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
VF M ERNII+YNS+IL GLHG QAF F ++++KGL PDE TFSALL ACCH
Sbjct: 361 TCVFRIMLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKGLVPDEGTFSALLSACCHA 420
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV DGRE+F RM +E+ I+A+ EHY+YMVKLLG G LEEAY+ SLPKPVD A+ GA
Sbjct: 421 GLVKDGRELFWRMKDEFNIKARPEHYVYMVKLLGGVGELEEAYNLTQSLPKPVDKAILGA 480
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLSCC YGNS+LAE VA Q+F+++P Y+VMLSN YA DGRWDDV KLRD +V G
Sbjct: 481 LLSCCDSYGNSELAETVAQQIFKSNPADNVYRVMLSNIYAGDGRWDDVKKLRDKMV-GGQ 539
Query: 541 RKEAGVSWVSGS 552
+K GVSW+ GS
Sbjct: 540 KKMRGVSWIEGS 551
>gi|15222662|ref|NP_176613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169396|sp|Q9C7V5.1|PP104_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g64310
gi|12323481|gb|AAG51720.1|AC066689_19 hypothetical protein; 77621-75963 [Arabidopsis thaliana]
gi|332196104|gb|AEE34225.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 552
Score = 608 bits (1568), Expect = e-171, Method: Compositional matrix adjust.
Identities = 297/546 (54%), Positives = 385/546 (70%), Gaps = 1/546 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
L ++ E ++ Q+ T++LH+ V K+ L RDP++AT+L R YALN+ L SAR LFD
Sbjct: 6 QLRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDV 65
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P+RSVFLWNSIIRAYA AH+F SLF +LR+ +PDNFTYAC+ R SE+ D GL
Sbjct: 66 FPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGL 125
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R +HG AIVSGLG D I SA+V AYSK LI EA K+F + DPDL L N MI G+ C
Sbjct: 126 RCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
GFWDK + LF+ M G P+ YT+V L SGL +PSLL V +H FCLK + DS+ YV
Sbjct: 186 GFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVG 245
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
LV+MY+RC C+ SA VFNS+ PDLV S+LITGYS+ G++ +AL+ F +L M GKK
Sbjct: 246 CALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKK 305
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D VL+A VL + A+ ++ G +H YVI+ G EL + V SAL+DMYSKCG L + +
Sbjct: 306 PDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSL 365
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F + E+NI+++NS+ILGLGLHGF AFE F +I+E GL PDE TFSALLC CCH GL+
Sbjct: 366 FAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLL 425
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
N G+EIF RM E+GI+ +TEHY+YMVKL+G+AG LEEA+ F+ SL KP+D + GALLS
Sbjct: 426 NKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLS 485
Query: 484 CCHIYGNSDLAEIVAHQLFEN-DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
CC ++ N+ LAE+VA + +N + R+ YKVMLSN YA GRWD+V +LRD I ++ K
Sbjct: 486 CCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGK 545
Query: 543 EAGVSW 548
G+SW
Sbjct: 546 LPGISW 551
>gi|297840043|ref|XP_002887903.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333744|gb|EFH64162.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 552
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 291/546 (53%), Positives = 388/546 (71%), Gaps = 1/546 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
L ++ E S+ Q+ T++LH+ V K+ L RDP++AT+LVR YALN+ L SAR LFD
Sbjct: 6 QLRLIIYEFSRKFQTRLSTQKLHSFVTKSKLARDPYFATQLVRFYALNDDLVSARKLFDV 65
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P+RSVFLWNSIIRAYA A++F+ + SLF +L + +PDNFTYAC+ R SE+ D GL
Sbjct: 66 FPERSVFLWNSIIRAYAKAYQFSTSLSLFSQMLSSDTRPDNFTYACLARGFSESFDTEGL 125
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R VHG AI+SGLG D I SA+V AYSK LI EA K+F + DPDL L N MI G+ C
Sbjct: 126 RRVHGIAIMSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCC 185
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
GFWDK + LF+ M G P+ YT+V L GL +PSLL + +HGFCLK + DS+ YV
Sbjct: 186 GFWDKGINLFNLMQHRGHLPNCYTMVALTIGLIDPSLLLIAWSVHGFCLKINLDSHSYVG 245
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
LV+MY+RC C+ SA V+NS+ PDLV S+LITGYS+ G++ +AL+ F +L M GKK
Sbjct: 246 CALVNMYSRCWCIVSACSVYNSICEPDLVACSSLITGYSRCGNHKEALHMFAELRMSGKK 305
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D VL+A VL + A+ +N G +HGYVI+ G EL + V S L+DMYSKCG L + +
Sbjct: 306 PDCVLVAIVLGSCAELSNSVYGKKVHGYVIRLGLELDIKVCSGLIDMYSKCGLLDCAMSL 365
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F + E+NI+++NS+ILGLGLHGF AFE F +++E GL PDE TFSALLC CCH GL+
Sbjct: 366 FAGIPEKNIVSFNSLILGLGLHGFASSAFEKFTEMLEMGLKPDEITFSALLCTCCHSGLL 425
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+ G++IF RM E+GI+ +TEHY+Y+VKL+G+AG LEEA+ F+ SL KP+D + GALLS
Sbjct: 426 DKGQDIFERMKSEFGIKPQTEHYVYIVKLMGMAGKLEEAFEFVMSLRKPIDSGILGALLS 485
Query: 484 CCHIYGNSDLAEIVAHQLFEN-DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
CC ++ N+ LAE+VA ++ ++ + R+ YKVMLSN YA GRWD+V +LRD I ++ K
Sbjct: 486 CCEVHENTHLAEVVAEKIQKSGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESFGGK 545
Query: 543 EAGVSW 548
G+SW
Sbjct: 546 LPGISW 551
>gi|297733726|emb|CBI14973.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 303/542 (55%), Positives = 385/542 (71%), Gaps = 56/542 (10%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+ ELSK HQ+L RTK+LHA + + L DPFYAT+++R YA+N+ L SAR LFD T R
Sbjct: 14 LLFELSKIHQTLPRTKKLHAFIIRNHLSDDPFYATRILRFYAINSDLCSARNLFDGTSYR 73
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
SV+LWNS+IRAYA H+F+DA LF +LRT++KPD+FT+AC+ RAC+EN D GLR VH
Sbjct: 74 SVYLWNSVIRAYAGEHQFDDALLLFAKMLRTEIKPDSFTFACVLRACAENFDPDGLRVVH 133
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
GG +VSGLG DS+ SALVTAYSKL ++DEA +VF G+++PDLVL N+M +G+ +CGFWD
Sbjct: 134 GGVVVSGLGFDSVCGSALVTAYSKLCMVDEASRVFYGMAEPDLVLWNAMAAGYGYCGFWD 193
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K LQLF M +G+ PD YT+VGLISGL +PSLL +G+GIHGFCLKSSFD D+V S LV
Sbjct: 194 KGLQLFSAMRSMGEQPDSYTMVGLISGLADPSLLGIGKGIHGFCLKSSFDCNDHVGSALV 253
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
SMY+RC+C+NSAY VF L PDL+ L G + V
Sbjct: 254 SMYSRCHCLNSAYGVFTILSQPDLIHGYVLRHGLESE----------------------V 291
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+I+S AL+DMYSKCG++ LG++VF++M
Sbjct: 292 MISS----------------------------------ALIDMYSKCGFVNLGVRVFDSM 317
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
RN ++YNS+ILGLG+HG QAF+ F +++EKG PDESTFSALLC CCH GLV +GR
Sbjct: 318 PNRNTVSYNSMILGLGIHGLAPQAFKMFEEVLEKGFKPDESTFSALLCTCCHAGLVKNGR 377
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
EIF+RMTEE+ IQA+T+HY++MVKLLG+AG L+EAY I SL +PVD + GALLSCC+
Sbjct: 378 EIFSRMTEEFHIQARTDHYVHMVKLLGMAGELQEAYDLILSLQQPVDSGIWGALLSCCNF 437
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+GN +LAEIVA QLFEN P K AY+VMLSN YA D RWDDV KLRDDI + G++K G+S
Sbjct: 438 HGNPELAEIVAQQLFENKPEKSAYRVMLSNIYAGDDRWDDVKKLRDDIQEAGIKKMPGLS 497
Query: 548 WV 549
W+
Sbjct: 498 WI 499
>gi|224135905|ref|XP_002322190.1| predicted protein [Populus trichocarpa]
gi|222869186|gb|EEF06317.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 586 bits (1511), Expect = e-165, Method: Compositional matrix adjust.
Identities = 288/449 (64%), Positives = 348/449 (77%), Gaps = 1/449 (0%)
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD +TYAC+ RAC E+ + GLR VHGG IVSGLG DS+T SALVT YSK+ L+ EA KV
Sbjct: 8 PDKYTYACLIRACCEDFYVDGLRIVHGGVIVSGLGLDSVTCSALVTGYSKMGLVGEASKV 67
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG-KTPDEYTLVGLISGLWEPSL 220
F GV +PDLVL N+MISG +CGF DK L F+ M G K PD YT V LISGL S
Sbjct: 68 FCGVFEPDLVLWNAMISGCGYCGFGDKGLLFFNEMRDNGNKRPDGYTFVALISGLANSSS 127
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +GQGIHG CLKS FD D+V S LVSMY+R +C+N AY VF SL PDLVTWSALITG
Sbjct: 128 LELGQGIHGLCLKSGFDCNDHVGSSLVSMYSRFSCINLAYSVFRSLCQPDLVTWSALITG 187
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
+SQ G++ KAL +++ LN+ GKK D VLIASVL A A+ ANV PGA IHGY++++GFE
Sbjct: 188 FSQAGEHEKALLFYKNLNLAGKKPDSVLIASVLVATAQLANVGPGAQIHGYIVRYGFESH 247
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
VMVSSAL+DMYSKCG++GLG++VFE M RNI++YNS+I GLGLHG QAF+ F +I+E
Sbjct: 248 VMVSSALIDMYSKCGFVGLGLRVFENMPNRNIVSYNSIISGLGLHGLASQAFDMFTEIVE 307
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
KGL PDESTFSALLCACCH GLV DGREIF RM +E+ IQA+TEHY+++VKLLG+AG L+
Sbjct: 308 KGLKPDESTFSALLCACCHAGLVKDGREIFRRMKDEFWIQARTEHYVHIVKLLGMAGELD 367
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
EAY+FI SL +PVD + GALLSCC +G+S+LAEIVA QLF+ +P+KGAY+VMLSN YA
Sbjct: 368 EAYNFILSLKQPVDSGIWGALLSCCDAHGDSELAEIVAQQLFDGEPKKGAYRVMLSNVYA 427
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DGRW DV K+RD I G K G+S +
Sbjct: 428 GDGRWVDVEKMRDYITTAGAEKMPGLSRI 456
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 151/306 (49%), Gaps = 3/306 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H V + L D + LV Y+ ++ A +F + + LWN++I
Sbjct: 32 VHGGVIVSGLGLDSVTCSALVTGYSKMGLVGEASKVFCGVFEPDLVLWNAMISGCGYCG- 90
Query: 85 FNDAKSLFKNLLRTQ--LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F D LF N +R +PD +T+ + + +S L + +HG + SG +
Sbjct: 91 FGDKGLLFFNEMRDNGNKRPDGYTFVALISGLANSSSLELGQGIHGLCLKSGFDCNDHVG 150
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
S+LV+ YS+ S I+ A VF + PDLV +++I+GF+ G +K+L + + GK
Sbjct: 151 SSLVSMYSRFSCINLAYSVFRSLCQPDLVTWSALITGFSQAGEHEKALLFYKNLNLAGKK 210
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD + ++ + + + G IHG+ ++ F+S+ VSS L+ MY++C + V
Sbjct: 211 PDSVLIASVLVATAQLANVGPGAQIHGYIVRYGFESHVMVSSALIDMYSKCGFVGLGLRV 270
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++ + ++V+++++I+G G +A F ++ +G K D +++L A + V
Sbjct: 271 FENMPNRNIVSYNSIISGLGLHGLASQAFDMFTEIVEKGLKPDESTFSALLCACCHAGLV 330
Query: 323 WPGAVI 328
G I
Sbjct: 331 KDGREI 336
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 142/327 (43%), Gaps = 37/327 (11%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ PD+YT LI E + + +HG + S S LV+ Y++
Sbjct: 1 MIGFDVIPDKYTYACLIRACCEDFYVDGLRIVHGGVIVSGLGLDSVTCSALVTGYSKMGL 60
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG-KKADPVLIASVLA 314
+ A VF +F PDLV W+A+I+G G K L +F ++ G K+ D ++++
Sbjct: 61 VGEASKVFCGVFEPDLVLWNAMISGCGYCGFGDKGLLFFNEMRDNGNKRPDGYTFVALIS 120
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A S+++ G IHG ++ GF+ + V S+LV MYS+ + L VF ++ + +++T
Sbjct: 121 GLANSSSLELGQGIHGLCLKSGFDCNDHVGSSLVSMYSRFSCINLAYSVFRSLCQPDLVT 180
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++++I G G +A F++++ G PD +++L A V G +I +
Sbjct: 181 WSALITGFSQAGEHEKALLFYKNLNLAGKKPDSVLIASVLVATAQLANVGPGAQIHGYIV 240
Query: 435 EEYGIQAKTE-------------------------------HYIYMVKLLGLAGNLEEAY 463
YG ++ Y ++ LGL G +A+
Sbjct: 241 -RYGFESHVMVSSALIDMYSKCGFVGLGLRVFENMPNRNIVSYNSIISGLGLHGLASQAF 299
Query: 464 SFIWSLP----KPVDPAVSGALLSCCH 486
+ KP + S L +CCH
Sbjct: 300 DMFTEIVEKGLKPDESTFSALLCACCH 326
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 142/314 (45%), Gaps = 14/314 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL + +H L K+ + + LV +Y+ + + A +F Q + W+++I
Sbjct: 127 SLELGQGIHGLCLKSGFDCNDHVGSSLVSMYSRFSCINLAYSVFRSLCQPDLVTWSALIT 186
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
++ A A +KNL KPD+ A + A ++ +++ PG + +HG + G
Sbjct: 187 GFSQAGEHEKALLFYKNLNLAGKKPDSVLIASVLVATAQLANVGPGAQ-IHGYIVRYGFE 245
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ SSAL+ YSK + ++VF+ + + ++V NS+ISG G ++ +F +
Sbjct: 246 SHVMVSSALIDMYSKCGFVGLGLRVFENMPNRNIVSYNSIISGLGLHGLASQAFDMFTEI 305
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSSVLVSMYA 251
+ G PDE T L+ L+ G+ I F +++ + Y ++ V +
Sbjct: 306 VEKGLKPDESTFSALLCACCHAGLVKDGREIFRRMKDEFWIQARTEHYVHI----VKLLG 361
Query: 252 RCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKL--NMQGKKADPVL 308
++ AY+ SL P D W AL++ GD A ++L K A V+
Sbjct: 362 MAGELDEAYNFILSLKQPVDSGIWGALLSCCDAHGDSELAEIVAQQLFDGEPKKGAYRVM 421
Query: 309 IASVLAAAAKSANV 322
+++V A + +V
Sbjct: 422 LSNVYAGDGRWVDV 435
>gi|255540549|ref|XP_002511339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550454|gb|EEF51941.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 428
Score = 484 bits (1247), Expect = e-134, Method: Compositional matrix adjust.
Identities = 235/373 (63%), Positives = 293/373 (78%), Gaps = 1/373 (0%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+L T +KPDN+T+AC+ RAC EN DL GLR +HGG IVSGLG DS++ SALVTAYSK++
Sbjct: 1 MLVTGIKPDNYTHACLIRACHENFDLDGLRVLHGGVIVSGLGIDSVSCSALVTAYSKMNY 60
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLIS 213
+ EA KVF G+ +PD+VL NSMISG+++CGFW+K L+LF+ M K PD +TLVGLIS
Sbjct: 61 VREASKVFKGIFEPDMVLWNSMISGYSYCGFWNKGLELFNQMRENRKQQPDGFTLVGLIS 120
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
GL + SLL +GQG+HG CLK+ F+ YV S LVSMY+R C+NSAY+VF+SL PDLV
Sbjct: 121 GLMDFSLLRIGQGVHGLCLKTGFNCNAYVGSALVSMYSRFKCINSAYNVFSSLCQPDLVA 180
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
WSALITGYSQ GDY KAL + L +GKKADPVLIASVL AAA+ A++ G IHGYV+
Sbjct: 181 WSALITGYSQSGDYNKALVFCTNLCGEGKKADPVLIASVLVAAARLADLGHGTEIHGYVL 240
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+HGFE +MVSSAL+DMY KCG +G GI+VF+ + +NII+YNSVILGLGLHG QAFE
Sbjct: 241 RHGFESDIMVSSALIDMYMKCGLVGWGIRVFDNIRNQNIISYNSVILGLGLHGLAAQAFE 300
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F +++EKGL PDESTFS LLCACCH GLV DG I+ +M +E+ I +TEHY+++VKLL
Sbjct: 301 LFEEMLEKGLKPDESTFSTLLCACCHAGLVKDGWRIYKQMMDEFCIPPRTEHYVHIVKLL 360
Query: 454 GLAGNLEEAYSFI 466
G+AG LE+AY FI
Sbjct: 361 GMAGELEKAYDFI 373
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 153/325 (47%), Gaps = 1/325 (0%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H ++ + L + LH V + L D + LV Y+ N + A +F
Sbjct: 13 HACLIRACHENFDLDGLRVLHGGVIVSGLGIDSVSCSALVTAYSKMNYVREASKVFKGIF 72
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLR 124
+ + LWNS+I Y+ +N LF + + +PD FT + + S L +
Sbjct: 73 EPDMVLWNSMISGYSYCGFWNKGLELFNQMRENRKQQPDGFTLVGLISGLMDFSLLRIGQ 132
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VHG + +G ++ SALV+ YS+ I+ A VF + PDLV +++I+G++ G
Sbjct: 133 GVHGLCLKTGFNCNAYVGSALVSMYSRFKCINSAYNVFSSLCQPDLVAWSALITGYSQSG 192
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++K+L + GK D + ++ + L G IHG+ L+ F+S VSS
Sbjct: 193 DYNKALVFCTNLCGEGKKADPVLIASVLVAAARLADLGHGTEIHGYVLRHGFESDIMVSS 252
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+ MY +C + VF+++ + ++++++++I G G +A F ++ +G K
Sbjct: 253 ALIDMYMKCGLVGWGIRVFDNIRNQNIISYNSVILGLGLHGLAAQAFELFEEMLEKGLKP 312
Query: 305 DPVLIASVLAAAAKSANVWPGAVIH 329
D +++L A + V G I+
Sbjct: 313 DESTFSTLLCACCHAGLVKDGWRIY 337
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 102/227 (44%), Gaps = 5/227 (2%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L K + + + LV +Y+ + SA +F Q + W+++I Y+ +
Sbjct: 134 VHGLCLKTGFNCNAYVGSALVSMYSRFKCINSAYNVFSSLCQPDLVAWSALITGYSQSGD 193
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+N A NL K D A + A + +DL +HG + G D + SSA
Sbjct: 194 YNKALVFCTNLCGEGKKADPVLIASVLVAAARLADLGHGTEIHGYVLRHGFESDIMVSSA 253
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K L+ I+VFD + + +++ NS+I G G ++ +LF+ ML G PD
Sbjct: 254 LIDMYMKCGLVGWGIRVFDNIRNQNIISYNSVILGLGLHGLAAQAFELFEEMLEKGLKPD 313
Query: 205 EYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVL 246
E T L+ L+ G Q + FC+ + Y ++ +L
Sbjct: 314 ESTFSTLLCACCHAGLVKDGWRIYKQMMDEFCIPPRTEHYVHIVKLL 360
>gi|357135145|ref|XP_003569172.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g64310-like [Brachypodium distachyon]
Length = 555
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/535 (43%), Positives = 320/535 (59%), Gaps = 9/535 (1%)
Query: 20 SRTKELHALVAKASLLRDPFYATK----LVRLYALNNVLPSARILFDKTPQR-SVFLWNS 74
S TK++HA + LL PF L+R YA SA L D+TP+ S L+N+
Sbjct: 20 SHTKQIHARL----LLVSPFIPDDVRLFLLRSYAGRGDFASAHCLLDETPRPVSPLLYNA 75
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+IRA+A A +LF + R+ PD T+AC+ RAC++ S + VHG A SG
Sbjct: 76 VIRAHARRLDLPAALALFARMRRSATPPDAHTFACVVRACADCSSPDTAKIVHGVASSSG 135
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + SALV+AYSK L+D A +FDG+ DPDLVL NSM+SG+ + W + LQLF
Sbjct: 136 MSSHPVVGSALVSAYSKFLLVDSARHMFDGLPDPDLVLWNSMLSGYGYREMWVEGLQLFS 195
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M R G+ PD Y++V L+S P L GQ +HG C+K +DS +V S LVSMY RC
Sbjct: 196 AMRRAGEEPDGYSMVSLVSSFRNPEALDFGQAVHGVCIKGGYDSGHHVRSALVSMYFRCG 255
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
CM S +F +L DLVTWS+LITG Q G Y ++ FR++ G++ D +LIAS+L+
Sbjct: 256 CMESGQTLFGNLLDADLVTWSSLITGQLQTGKYEESFNLFRQMCYSGRRPDSILIASLLS 315
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A +A V IH Y I+ G + V VSS+L+D Y+KCG+ LG VF M +N +
Sbjct: 316 ACASTATVSCSREIHCYAIRIGADADVKVSSSLMDAYAKCGFAELGYLVFRQMPNKNSVV 375
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
YN VI LG HGF +A E ++I PD +TFSALL ACCH GL+++G ++F RM
Sbjct: 376 YNMVISNLGSHGFALKAIEVHDEMICDKYRPDGATFSALLAACCHAGLLDEGWKLFRRMQ 435
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+E+ I + EHY+YMV+LL L+EAY I ++P D V GALL C + NS L
Sbjct: 436 DEFHIVVEMEHYVYMVRLLATFNQLKEAYDLIQTMPMAPDCGVWGALLWGCCFHRNSSLG 495
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+V+ +LFE P K AY +MLSN YA W D ++R +I+ G+ K G+SWV
Sbjct: 496 RVVSEKLFEIYPDKAAYGIMLSNLYASQDMWWDAEEVRSEILKEGMHKNTGISWV 550
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 118/273 (43%), Gaps = 10/273 (3%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
++ ++L + +H + K + LV +Y + S + LF + W+
Sbjct: 217 RNPEALDFGQAVHGVCIKGGYDSGHHVRSALVSMYFRCGCMESGQTLFGNLLDADLVTWS 276
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
S+I ++ ++ +LF+ + + +PD+ A + AC+ + + R +H AI
Sbjct: 277 SLITGQLQTGKYEESFNLFRQMCYSGRRPDSILIASLLSACASTATVSCSREIHCYAIRI 336
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D SS+L+ AY+K + VF + + + V+ N +IS GF K++++
Sbjct: 337 GADADVKVSSSLMDAYAKCGFAELGYLVFRQMPNKNSVVYNMVISNLGSHGFALKAIEVH 396
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSSVLVS 248
D M+ PD T L++ LL G + F + + Y Y +V
Sbjct: 397 DEMICDKYRPDGATFSALLAACCHAGLLDEGWKLFRRMQDEFHIVVEMEHYVY----MVR 452
Query: 249 MYARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
+ A N + AY + ++ PD W AL+ G
Sbjct: 453 LLATFNQLKEAYDLIQTMPMAPDCGVWGALLWG 485
>gi|242053239|ref|XP_002455765.1| hypothetical protein SORBIDRAFT_03g024530 [Sorghum bicolor]
gi|241927740|gb|EES00885.1| hypothetical protein SORBIDRAFT_03g024530 [Sorghum bicolor]
Length = 529
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 223/507 (43%), Positives = 314/507 (61%), Gaps = 1/507 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQR-SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP 102
++R YA SAR L D+ P S L+N++IRA+A A +LF + R+ P
Sbjct: 18 VLRSYAARGDFSSARRLLDEAPHPVSPLLYNALIRAHARRLDLPAALALFARMRRSATPP 77
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D T+AC+ RAC+E+S ++ VHG A G+ I SALV+ Y+K+ L+D A VF
Sbjct: 78 DAHTFACVLRACAESSRPDAVKVVHGIATSCGMCSRPIVLSALVSGYAKVGLVDNARSVF 137
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
DG+ +PDLVL NSM+S + + G W LQ+F M R G+ PD Y++VGLIS W P +L+
Sbjct: 138 DGLCEPDLVLWNSMMSAYGYQGMWYDGLQMFSLMRRAGEQPDGYSMVGLISCFWNPEILA 197
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
GQ +HG C+K +DS +V S LVSMY RC CM S +F SL DL+TWS+LITG
Sbjct: 198 FGQAVHGMCVKGGYDSGHHVRSTLVSMYMRCGCMESGQSLFGSLPDADLITWSSLITGLM 257
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q G Y ++ FRKL G++ D +LIASVL+ A +A+V +H Y ++ G ++ +
Sbjct: 258 QTGKYEESFDLFRKLCFTGRRPDSILIASVLSVCASTASVSCTREVHCYALRLGADMDIR 317
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
VSS+L+D Y+KCG+ LG VF + ++N + YN+VI LG HGF +A E +++
Sbjct: 318 VSSSLMDAYAKCGFTELGYLVFHQLPDKNSVMYNTVISNLGSHGFATKAIEVLDEMVNDK 377
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
L PD +TFSALL ACCH G + +G ++F RM +E+ I + EHY+YMV+LL G L+EA
Sbjct: 378 LRPDSATFSALLAACCHVGHLEEGWKLFRRMRDEFKIVVEVEHYVYMVRLLATFGQLKEA 437
Query: 463 YSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAED 522
Y I ++ D V GALL C ++ +S L IVA +LFE + K AY+VMLSN YA
Sbjct: 438 YDLIQTMQIQPDCGVWGALLWGCCVHRDSSLGRIVAEKLFELNSEKAAYRVMLSNLYASQ 497
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWV 549
W D ++RD++ + K G+SWV
Sbjct: 498 EMWWDAEEVRDELSKENMYKNTGMSWV 524
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 137/305 (44%), Gaps = 2/305 (0%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K +H + + P + LV YA ++ +AR +FD + + LWNS++ AY
Sbjct: 98 VKVVHGIATSCGMCSRPIVLSALVSGYAKVGLVDNARSVFDGLCEPDLVLWNSMMSAYGY 157
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFVHGGAIVSGLGRDSI 140
+ D +F + R +PD ++ + +C N ++ + VHG + G
Sbjct: 158 QGMWYDGLQMFSLMRRAGEQPDGYSMVGLI-SCFWNPEILAFGQAVHGMCVKGGYDSGHH 216
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
S LV+ Y + ++ +F + D DL+ +S+I+G G +++S LF + G
Sbjct: 217 VRSTLVSMYMRCGCMESGQSLFGSLPDADLITWSSLITGLMQTGKYEESFDLFRKLCFTG 276
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+ PD + ++S + +S + +H + L+ D VSS L+ YA+C Y
Sbjct: 277 RRPDSILIASVLSVCASTASVSCTREVHCYALRLGADMDIRVSSSLMDAYAKCGFTELGY 336
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+ L + V ++ +I+ G KA+ ++ + D +++LAA
Sbjct: 337 LVFHQLPDKNSVMYNTVISNLGSHGFATKAIEVLDEMVNDKLRPDSATFSALLAACCHVG 396
Query: 321 NVWPG 325
++ G
Sbjct: 397 HLEEG 401
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 10/264 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H + K + LV +Y + S + LF P + W+S+I
Sbjct: 200 QAVHGMCVKGGYDSGHHVRSTLVSMYMRCGCMESGQSLFGSLPDADLITWSSLITGLMQT 259
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++ ++ LF+ L T +PD+ A + C+ + + R VH A+ G D S
Sbjct: 260 GKYEESFDLFRKLCFTGRRPDSILIASVLSVCASTASVSCTREVHCYALRLGADMDIRVS 319
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
S+L+ AY+K + VF + D + V+ N++IS GF K++++ D M+
Sbjct: 320 SSLMDAYAKCGFTELGYLVFHQLPDKNSVMYNTVISNLGSHGFATKAIEVLDEMVNDKLR 379
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYARCNCMN 257
PD T L++ L G + + D + V V +V + A +
Sbjct: 380 PDSATFSALLAACCHVGHLEEGWKL----FRRMRDEFKIVVEVEHYVYMVRLLATFGQLK 435
Query: 258 SAYHVFNSL-FHPDLVTWSALITG 280
AY + ++ PD W AL+ G
Sbjct: 436 EAYDLIQTMQIQPDCGVWGALLWG 459
>gi|414881929|tpg|DAA59060.1| TPA: selenium-binding protein-like protein [Zea mays]
Length = 560
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/536 (42%), Positives = 324/536 (60%), Gaps = 4/536 (0%)
Query: 18 SLSRTKELHA--LVAKASLLRDPFYATKLV-RLYALNNVLPSARILFDKTPQ-RSVFLWN 73
S S+TK+LHA +VA P Y LV R YA L SAR L D+ P+ S L+N
Sbjct: 20 SFSQTKQLHARLIVASPFSASGPAYLRLLVLRSYAARGDLSSARRLLDEAPRPASPLLYN 79
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++IRA+A A +LF + R+ PD T+AC+ RAC+E+S ++ VHG A
Sbjct: 80 ALIRAHARRLDLPAALALFARMRRSATPPDAHTFACVLRACAESSRPDAVKVVHGIATTC 139
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G+ I S+LV+AY+KL L+D A +FDG+ +PDLV+ NSM+S + + G W LQ+F
Sbjct: 140 GMCSRPIVLSSLVSAYAKLGLVDNARSLFDGLCEPDLVIWNSMMSAYGYQGMWYDGLQMF 199
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M R G+ PD Y++V L+S W P +L+ GQ +HG C+K +DS +V S LVSMY R
Sbjct: 200 SLMRRAGQHPDGYSMVSLVSCFWNPEILAFGQAVHGICVKGGYDSGHHVRSTLVSMYMRF 259
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
C+ S +F SL DL+TWS+LITG Q G Y ++ FRK+ G++ D +LIASVL
Sbjct: 260 GCVESGQRLFGSLSDVDLITWSSLITGLIQTGKYEESFDLFRKMCFTGRRPDSILIASVL 319
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ A +A + +H Y ++ G ++ + VSS+L+D Y+KCG+ LG VF + +N +
Sbjct: 320 SVFASTAAISYTKEVHCYAVKLGADIDIRVSSSLMDAYAKCGFTELGYWVFRQVPNKNSV 379
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
YN+VI LG HGF +A E +++ L PD +TFS+LL ACCH G + +G ++F RM
Sbjct: 380 MYNTVISNLGSHGFATKAIEVLDEMVNDKLRPDSATFSSLLAACCHVGHLEEGWKLFRRM 439
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+E+ I + EHY+YMV+LL G L+EAY I ++ D V GALL C ++ +S
Sbjct: 440 RDEFKIVVEMEHYVYMVRLLATFGQLKEAYDLIQTMQIQPDCGVWGALLWGCCVHRDSSF 499
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
IVA +L E + K AY+VMLSN YA W D ++RD++ + K G SWV
Sbjct: 500 GRIVAEKLCELNSDKAAYRVMLSNMYASQEMWWDAEEVRDELSKENMYKNTGTSWV 555
>gi|226496936|ref|NP_001150921.1| selenium-binding protein-like [Zea mays]
gi|195642972|gb|ACG40954.1| selenium-binding protein-like [Zea mays]
Length = 560
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/536 (41%), Positives = 321/536 (59%), Gaps = 4/536 (0%)
Query: 18 SLSRTKELHA--LVAKASLLRDPFYATKLV-RLYALNNVLPSARILFDKTPQ-RSVFLWN 73
S TK+LHA +VA S P Y LV R YA L SAR L D+ P+ S L+N
Sbjct: 20 SFFHTKQLHARLIVASPSSASGPAYLRLLVLRSYAARGDLSSARRLLDEAPRPASPLLYN 79
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++IRA+A +LF + + PD T+AC+ RAC+E+S ++ VHG A
Sbjct: 80 ALIRAHARRLDLPAGLALFARMRCSATPPDAHTFACVLRACAESSRPDAVKVVHGIATTC 139
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G+ I S+LV+AY+KL L+D A +FDG+ +PDLV+ NSM+S + + G W LQ+F
Sbjct: 140 GMCSRPIVLSSLVSAYAKLGLVDNARSLFDGLCEPDLVIWNSMMSAYGYQGMWYDGLQMF 199
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M R G+ PD Y++V L+S W P +L+ GQ +HG C+K +DS +V S LVSMY RC
Sbjct: 200 SLMRRAGQHPDGYSMVSLVSCFWNPEILAFGQAVHGICVKGGYDSGHHVRSTLVSMYMRC 259
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
C+ S +F SL DL+TWS+LITG Q G Y ++ FRK+ G++ D +LIASVL
Sbjct: 260 GCVESGQRLFGSLPDVDLITWSSLITGLIQTGKYEESFDLFRKMCFTGRRPDSILIASVL 319
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ A +A + +H Y ++ G ++ + VSS+L+D Y+KCG+ LG VF + +N +
Sbjct: 320 SVFASTAAISYTKEVHCYAVKLGADIDIRVSSSLMDAYAKCGFTELGYWVFRQVPNKNSV 379
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
YN+VI L HGF +A E +++ L PD +TFS+LL ACCH G + +G ++F RM
Sbjct: 380 MYNTVISNLESHGFATKAIEVLDEMVNDKLRPDSATFSSLLAACCHVGHLEEGWKLFRRM 439
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+E+ I + EHY+YMV+LL G L+EAY I ++ D V GALL C ++ +S
Sbjct: 440 RDEFKIVVEMEHYVYMVRLLATFGQLKEAYDLIQTMQIQPDCGVWGALLWGCCVHRDSSF 499
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
IVA +L E + K AY+VMLSN YA W D ++RD++ + K G SWV
Sbjct: 500 GRIVAEKLCELNSDKAAYRVMLSNMYASQEMWWDAEEVRDELSKENMYKNTGTSWV 555
>gi|115437376|ref|NP_001043280.1| Os01g0545900 [Oryza sativa Japonica Group]
gi|57900029|dbj|BAD88071.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|57900513|dbj|BAD88108.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532811|dbj|BAF05194.1| Os01g0545900 [Oryza sativa Japonica Group]
gi|125570749|gb|EAZ12264.1| hypothetical protein OsJ_02152 [Oryza sativa Japonica Group]
Length = 569
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/543 (41%), Positives = 320/543 (58%), Gaps = 9/543 (1%)
Query: 19 LSRTKELHA---LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
L K+LHA + A D L+R YA L +A L D+ P S L N++
Sbjct: 25 LPHAKQLHARLLVSGPAPPDHDLRLRLLLLRSYAARGDLATAARLLDEAPPPSPLLHNAL 84
Query: 76 IRAYALAHRFNDAKSLFKNLLR------TQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
IRA+A A +LF + R T PD T+AC+ RAC++ S R V+G
Sbjct: 85 IRAHARRLDLRAALALFARMRRSRSSAATATAPDAHTFACVLRACADCSRPDVARVVNGI 144
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ +G+ + SALV+AY+KL + +A +VFDG+ +PDLVL N M+SG+ + G W+
Sbjct: 145 VVCAGMSSHPVVGSALVSAYAKLGPVGDARRVFDGLPEPDLVLWNCMMSGYGYRGMWNDG 204
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L LF M + G+ PD Y++V L+S W L+ GQ IHG C+K +DS +V S LVSM
Sbjct: 205 LDLFSAMRKAGERPDGYSMVSLVSSFWNREALAFGQAIHGMCIKGGYDSGHHVRSALVSM 264
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y RC CM+S + +F +L DLVTWS+LITG Y ++ FR++ G++ D +L+
Sbjct: 265 YFRCGCMDSGHSLFGNLLDADLVTWSSLITGLLHICKYEESFGLFRQMCNSGRRPDSILV 324
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
AS+L+A A N+ IH Y + G + VSS+L+D YSKCG+ L VF M +
Sbjct: 325 ASLLSACASMVNISYSKEIHCYAFRVGAHTDIRVSSSLMDAYSKCGFADLAYGVFFQMPD 384
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+N++ YN+VI LG HGF +A E +++ L PD TFSALL ACCH GL+ +G ++
Sbjct: 385 KNLVMYNTVISNLGSHGFAMKAIEVLDEMVSDKLKPDSVTFSALLAACCHAGLLEEGWKL 444
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F RM +E+ + KTEHY+Y+V+LL G L+EAY I ++P P D V GALL C ++
Sbjct: 445 FRRMRDEFNMAVKTEHYVYIVRLLATFGQLKEAYGLIQTMPAPADSGVWGALLWGCCVHR 504
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+S L IVA +LFE P K +Y+VMLSN YA W D ++R+++ + + K G+SWV
Sbjct: 505 DSSLGRIVADKLFELYPDKASYRVMLSNLYASQEMWWDAEEVREELWNEDVHKNTGISWV 564
Query: 550 SGS 552
+
Sbjct: 565 GNA 567
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 10/272 (3%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
+ ++L+ + +H + K + LV +Y + S LF + W+S
Sbjct: 232 NREALAFGQAIHGMCIKGGYDSGHHVRSALVSMYFRCGCMDSGHSLFGNLLDADLVTWSS 291
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I ++ ++ LF+ + + +PD+ A + AC+ ++ + +H A G
Sbjct: 292 LITGLLHICKYEESFGLFRQMCNSGRRPDSILVASLLSACASMVNISYSKEIHCYAFRVG 351
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D SS+L+ AYSK D A VF + D +LV+ N++IS GF K++++ D
Sbjct: 352 AHTDIRVSSSLMDAYSKCGFADLAYGVFFQMPDKNLVMYNTVISNLGSHGFAMKAIEVLD 411
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSSVLVSM 249
M+ PD T L++ LL G + F + + Y Y+ V +
Sbjct: 412 EMVSDKLKPDSVTFSALLAACCHAGLLEEGWKLFRRMRDEFNMAVKTEHYVYI----VRL 467
Query: 250 YARCNCMNSAYHVFNSLFHP-DLVTWSALITG 280
A + AY + ++ P D W AL+ G
Sbjct: 468 LATFGQLKEAYGLIQTMPAPADSGVWGALLWG 499
>gi|218188418|gb|EEC70845.1| hypothetical protein OsI_02345 [Oryza sativa Indica Group]
Length = 466
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/452 (43%), Positives = 282/452 (62%)
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
T PD T+AC+ RAC++ S R V+G + +G+ + SALV+AY+KL + +
Sbjct: 10 TATAPDAHTFACVLRACADCSRPDVARVVNGIVVCAGMSSHPVVGSALVSAYAKLGPVGD 69
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +VFDG+ +PDLVL N M+SG+ + G W+ L LF M + G+ PD Y++V LIS W
Sbjct: 70 ARRVFDGLPEPDLVLWNCMMSGYGYRGMWNDGLDLFSAMRKAGERPDGYSMVSLISSFWN 129
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
+ GQ IHG C+K S+DS +V S LVSMY RC CM+S + +F +L DLVTWS+L
Sbjct: 130 REARAFGQAIHGMCIKGSYDSGHHVRSALVSMYFRCGCMDSGHSLFGNLLDADLVTWSSL 189
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
ITG Y ++ FR++ G++ D +L+AS+L+A A N+ IH Y + G
Sbjct: 190 ITGLLHICKYEESFGLFRQMCNSGRRPDSILVASLLSACASMVNISYSKEIHCYAFRVGA 249
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ VSS+L+D YSKCG+ L VF M ++N++ YN+VI LG HGF +A E +
Sbjct: 250 HTDIRVSSSLMDAYSKCGFADLAYGVFFQMPDKNLVMYNTVISNLGSHGFAMKAIEVLDE 309
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
++ L PD TFSALL ACCH GL+ +G ++F RM +E+ + KTEHY+Y+V+LL G
Sbjct: 310 MVSDKLKPDSVTFSALLAACCHAGLLEEGWKLFRRMRDEFNMAVKTEHYVYIVRLLATFG 369
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L+EAY I ++P P D V GALL C ++ +S L IVA +LFE P K +Y+VMLSN
Sbjct: 370 QLKEAYGLIQTMPAPADSGVWGALLWGCCVHRDSSLGRIVADKLFELYPDKASYRVMLSN 429
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA W D ++R+++ + + K G+SWV
Sbjct: 430 LYASQEMWWDAEEVREELWNEDVHKNTGISWV 461
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 131/294 (44%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+ ++ +V A + P + LV YA + AR +FD P+ + LWN ++ Y
Sbjct: 35 ARVVNGIVVCAGMSSHPVVGSALVSAYAKLGPVGDARRVFDGLPEPDLVLWNCMMSGYGY 94
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ND LF + + +PD ++ + + + +HG I
Sbjct: 95 RGMWNDGLDLFSAMRKAGERPDGYSMVSLISSFWNREARAFGQAIHGMCIKGSYDSGHHV 154
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
SALV+ Y + +D +F + D DLV +S+I+G H +++S LF M G+
Sbjct: 155 RSALVSMYFRCGCMDSGHSLFGNLLDADLVTWSSLITGLLHICKYEESFGLFRQMCNSGR 214
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD + L+S +S + IH + + + VSS L+ Y++C + AY
Sbjct: 215 RPDSILVASLLSACASMVNISYSKEIHCYAFRVGAHTDIRVSSSLMDAYSKCGFADLAYG 274
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
VF + +LV ++ +I+ G KA+ ++ K D V +++LAA
Sbjct: 275 VFFQMPDKNLVMYNTVISNLGSHGFAMKAIEVLDEMVSDKLKPDSVTFSALLAA 328
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 113/264 (42%), Gaps = 10/264 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H + K S + LV +Y + S LF + W+S+I
Sbjct: 137 QAIHGMCIKGSYDSGHHVRSALVSMYFRCGCMDSGHSLFGNLLDADLVTWSSLITGLLHI 196
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++ ++ LF+ + + +PD+ A + AC+ ++ + +H A G D S
Sbjct: 197 CKYEESFGLFRQMCNSGRRPDSILVASLLSACASMVNISYSKEIHCYAFRVGAHTDIRVS 256
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
S+L+ AYSK D A VF + D +LV+ N++IS GF K++++ D M+
Sbjct: 257 SSLMDAYSKCGFADLAYGVFFQMPDKNLVMYNTVISNLGSHGFAMKAIEVLDEMVSDKLK 316
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD T L++ LL G + F + + Y Y+ V + A +
Sbjct: 317 PDSVTFSALLAACCHAGLLEEGWKLFRRMRDEFNMAVKTEHYVYI----VRLLATFGQLK 372
Query: 258 SAYHVFNSLFHP-DLVTWSALITG 280
AY + ++ P D W AL+ G
Sbjct: 373 EAYGLIQTMPAPADSGVWGALLWG 396
>gi|238015254|gb|ACR38662.1| unknown [Zea mays]
Length = 460
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/455 (42%), Positives = 281/455 (61%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+ R+ PD T+AC+ RAC+E+S ++ VHG A G+ I S+LV+AY+KL L
Sbjct: 1 MRRSATPPDAHTFACVLRACAESSRPDAVKVVHGIATTCGMCSRPIVLSSLVSAYAKLGL 60
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+D A +FDG+ +PDLV+ NSM+S + + G W LQ+F M R G+ PD Y++V L+S
Sbjct: 61 VDNARSLFDGLCEPDLVIWNSMMSAYGYQGMWYDGLQMFSLMRRAGQHPDGYSMVSLVSC 120
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
W P +L+ GQ +HG C+K +DS +V S LVSMY R C+ S +F SL DL+TW
Sbjct: 121 FWNPEILAFGQAVHGICVKGGYDSGHHVRSTLVSMYMRFGCVESGQRLFGSLSDVDLITW 180
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
S+LITG Q G Y ++ FRK+ G++ D +LIASVL+ A +A + +H Y ++
Sbjct: 181 SSLITGLIQTGKYEESFDLFRKMCFTGRRPDSILIASVLSVFASTAAISYTKEVHCYAVK 240
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G ++ + VSS+L+D Y+KCG+ LG VF + +N + YN+VI LG HGF +A E
Sbjct: 241 LGADIDIRVSSSLMDAYAKCGFTELGYWVFRQVPNKNSVMYNTVISNLGSHGFATKAIEV 300
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
+++ L PD +TFS+LL ACCH G + +G ++F RM +E+ I + EHY+YMV+LL
Sbjct: 301 LDEMVNDKLRPDSATFSSLLAACCHVGHLEEGWKLFRRMRDEFKIVVEMEHYVYMVRLLA 360
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
G L+EAY I ++ D V GALL C ++ +S IVA +L E + K AY+VM
Sbjct: 361 TFGQLKEAYDLIQTMQIQPDCGVWGALLWGCCVHRDSSFGRIVAEKLCELNSDKAAYRVM 420
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
LSN YA W D ++RD++ + K G SWV
Sbjct: 421 LSNMYASQEMWWDAEEVRDELSKENMYKNTGTSWV 455
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 179/399 (44%), Gaps = 12/399 (3%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K +H + + P + LV YA ++ +AR LFD + + +WNS++ AY
Sbjct: 29 VKVVHGIATTCGMCSRPIVLSSLVSAYAKLGLVDNARSLFDGLCEPDLVIWNSMMSAYGY 88
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFVHGGAIVSGLGRDSI 140
+ D +F + R PD ++ + +C N ++ + VHG + G
Sbjct: 89 QGMWYDGLQMFSLMRRAGQHPDGYSMVSLV-SCFWNPEILAFGQAVHGICVKGGYDSGHH 147
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
S LV+ Y + ++ ++F +SD DL+ +S+I+G G +++S LF M G
Sbjct: 148 VRSTLVSMYMRFGCVESGQRLFGSLSDVDLITWSSLITGLIQTGKYEESFDLFRKMCFTG 207
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+ PD + ++S + +S + +H + +K D VSS L+ YA+C Y
Sbjct: 208 RRPDSILIASVLSVFASTAAISYTKEVHCYAVKLGADIDIRVSSSLMDAYAKCGFTELGY 267
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + + V ++ +I+ G KA+ ++ + D +S+LAA
Sbjct: 268 WVFRQVPNKNSVMYNTVISNLGSHGFATKAIEVLDEMVNDKLRPDSATFSSLLAACCHVG 327
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSS--ALVDMYSKCGYLGLGIQVFETMS-ERNIITYNS 377
++ G + ++ F++ V + +V + + G L + +TM + + + +
Sbjct: 328 HLEEGWKLFRR-MRDEFKIVVEMEHYVYMVRLLATFGQLKEAYDLIQTMQIQPDCGVWGA 386
Query: 378 VILGLGLHGFTYQAFEFFRDIIEK--GLNPDESTFSALL 414
++ G +H + F R + EK LN D++ + +L
Sbjct: 387 LLWGCCVH----RDSSFGRIVAEKLCELNSDKAAYRVML 421
>gi|297802180|ref|XP_002868974.1| hypothetical protein ARALYDRAFT_490847 [Arabidopsis lyrata subsp.
lyrata]
gi|297314810|gb|EFH45233.1| hypothetical protein ARALYDRAFT_490847 [Arabidopsis lyrata subsp.
lyrata]
Length = 427
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 205/438 (46%), Positives = 268/438 (61%), Gaps = 49/438 (11%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
T++LH+ V K+ L RDP++A +LVR YALN+ L SAR LFD VFL R YA
Sbjct: 14 TQKLHSFVTKSKLSRDPYFAAQLVRFYALNDDLLSARKLFD------VFLE----RTYAK 63
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
AH+F+ + SLF +L + +PDNFTY C+ R SE+ D GLR +HG A+VSGLG D I
Sbjct: 64 AHQFSTSLSLFSQMLSSDTRPDNFTYVCVARGFSESFDSEGLRRIHGIAVVSGLGFDQIC 123
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
SA+V AYS LI EA K+F + DPDL L N MI G+ CGFWDK + LF+ M G
Sbjct: 124 GSAIVKAYSNPGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGH 183
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ YT+V L++GL +PSLL + +HGFCLK + DS+ YV V+MY+RC C+ SA
Sbjct: 184 VPNCYTMVALMTGLIDPSLLLIAWSVHGFCLKINLDSHSYVGCAFVTMYSRCMCIASAGS 243
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
V+NS+ PDLV S+LITGYS+ G + +AL+ F +L M KK D VL+A
Sbjct: 244 VYNSICEPDLVACSSLITGYSRCGIHKEALHLFAELRMSSKKPDCVLVAIYT-------- 295
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
E V S L+DMYSKCG L + +F + E++I+++NSVI
Sbjct: 296 ----------------EKKCTVCSGLIDMYSKCGLLDSAMNLFAGIPEKHIVSFNSVI-- 337
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
FT F R I TFSALLC CCH GL++ G+EIF RM E+GI+
Sbjct: 338 ---SRFTRFCFLCVRKI----------TFSALLCNCCHSGLLDKGQEIFERMKSEFGIEP 384
Query: 442 KTEHYIYMVKLLGLAGNL 459
+TEHY+YMVKL+G+AG L
Sbjct: 385 QTEHYVYMVKLMGMAGKL 402
>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Vitis vinifera]
Length = 853
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 191/541 (35%), Positives = 299/541 (55%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S ++ +LH LV + L D A L+ +YA L AR LFD P+
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTD 313
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN +I Y ++A LF ++ ++KPD+ T++ SE + L + +H
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATLRQGKEIHC 373
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I +G+ D SAL+ Y K ++ A K+FD + D+V+C +MISG+ G +
Sbjct: 374 YIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNN 433
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L++F W+L+ + TL ++ + L++G+ +HG LK+ YV S ++
Sbjct: 434 ALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMD 493
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ A+ F + D V W+++IT SQ G +A+ FR++ M G K D V
Sbjct: 494 MYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVS 553
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I++ L+A A + G IH ++++ F + SAL+DMYSKCG L L +VF+TM
Sbjct: 554 ISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTME 613
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E+N +++NS+I G HG + F ++ G+ PD TF A++ AC H G V++G
Sbjct: 614 EKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIH 673
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F MTEE GI A+ EHY MV L G AG L EA+ I S+P D V G LL C ++
Sbjct: 674 YFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLH 733
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +LAE+ + LF+ DP+ Y V+LSN +A G+W+ V+K+R + + G++K G SW
Sbjct: 734 GNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSW 793
Query: 549 V 549
+
Sbjct: 794 I 794
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 207/421 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ LS+ ++ HA + + + TKL+ +Y L A+ +F +
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +IR + + +F+ A + +L PD +T+ + +AC + + R VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G D S+L+ YS+ I +A +FD + D VL N M++G+ G WD
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +F M R P+ T ++S +++ G +HG + S + V++ L++
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A +F+ + DLVTW+ +I+GY Q G +A F ++ K D +
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSIT 351
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+S L ++ A + G IH Y+I++G L V + SAL+D+Y KC + + ++F+ +
Sbjct: 352 FSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQRT 411
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+I+ ++I G L+G A E FR ++++ + + T +++L AC + G+E
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 471
Query: 429 I 429
+
Sbjct: 472 L 472
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
LV ++ +PS LS G+ H L + + + L+ MY C A ++F L
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
W+ +I G++ G + AL ++ K+ G D V+ A +V G V
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+H + GFEL V V S+L+ YS+ G + +F+ M ++ + +N ++ G +G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
A F ++ NP+ TF+ +L C ++N G ++ + G++ +
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS-GLEMDSPVAN 287
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPK 471
++ + G+L +A +PK
Sbjct: 288 TLLAMYAKCGHLFDARRLFDMMPK 311
>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 355 bits (910), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 302/543 (55%), Gaps = 2/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ S++ + +H + D F + L++ Y+ N + AR LFD+ P +
Sbjct: 153 VIKACGGLNSVALGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKD 212
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
LWN ++ Y +++A +F + RT+ P++ T+AC+ C+ + +HG
Sbjct: 213 GVLWNVMLNGYVKNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHG 272
Query: 129 GAIVSGLGRDSITSS--ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
+ SGL DS ++ AL+ Y K ++ A K+FD + D+V+C +MISG+ G
Sbjct: 273 LVVSSGLEMDSPVANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMN 332
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ +L++F W+L+ + TL ++ + L++G+ +HG LK+ YV S +
Sbjct: 333 NNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAI 392
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+C ++ A+ F + D V W+++IT SQ G +A+ FR++ M G K D
Sbjct: 393 MDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDC 452
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V I++ L+A A + G IH ++++ F + SAL+DMYSKCG L L +VF+T
Sbjct: 453 VSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDT 512
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M E+N +++NS+I G HG + F ++ G+ PD TF A++ AC H G V++G
Sbjct: 513 MEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEG 572
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
F MTEE GI A+ EHY MV L G AG L EA+ I S+P D V G LL C
Sbjct: 573 IHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACR 632
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++GN +LAE+ + LF+ DP+ Y V+LSN +A G+W+ V+K+R + + G++K G
Sbjct: 633 LHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGC 692
Query: 547 SWV 549
SW+
Sbjct: 693 SWI 695
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 208/427 (48%), Gaps = 2/427 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ LS+ ++ HA + + + TKL+ +Y L A+ +F +
Sbjct: 52 ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +IR + + +F+ A + +L PD +T+ + +AC + + R VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G D S+L+ YS+ I +A +FD + D VL N M++G+ G WD
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--L 246
+ +F M R P+ T ++S +++ G +HG + S + V++ L
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFAL 291
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ +Y +C + A +F+ D+V +A+I+GY G AL FR L + +A+
Sbjct: 292 IDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANS 351
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V +ASVL A A A + G +HG+++++G S V SA++DMY+KCG L L Q F
Sbjct: 352 VTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIG 411
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+S+++ + +NS+I +G +A + FR + G D + SA L AC + ++ G
Sbjct: 412 ISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG 471
Query: 427 REIFTRM 433
+EI M
Sbjct: 472 KEIHAFM 478
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 122/277 (44%), Gaps = 2/277 (0%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
LV ++ +PS LS G+ H L + + + L+ MY C A ++F L
Sbjct: 49 LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
W+ +I G++ G + AL ++ K+ G D V+ A +V G V
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+H + GFEL V V S+L+ YS+ G + +F+ M ++ + +N ++ G +G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE-YGIQAKTEHY 446
A F ++ NP+ TF+ +L C ++N G ++ + + + +
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANT 288
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
++ + ++E A I+ PVD V A++S
Sbjct: 289 FALIDIYFKCRDVEMARK-IFDQRTPVDIVVCTAMIS 324
>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
Length = 795
Score = 352 bits (902), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 194/542 (35%), Positives = 298/542 (54%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ S L +++H + D T L +Y L +AR +FD+ P+R
Sbjct: 126 VIKACGSQSDLQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRD 185
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN+II Y+ + +A +LF + +KP++ T + C+ L + +H
Sbjct: 186 VVSWNAIIAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHC 245
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI SG+ D + + LV Y+K ++ A K+F+ + D+ N++I G++ +
Sbjct: 246 YAIRSGIESDVLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHE 305
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L F+ M G P+ T+V ++ L GQ IHG+ ++S F+S D V + LV+
Sbjct: 306 ALAFFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVN 365
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C +NSAY +F + ++V W+A+I+GYSQ G +AL F ++ QG K D
Sbjct: 366 MYAKCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFA 425
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I SVL A A + G IHGY I+ GFE +V+V + LVD+Y+KCG + ++FE M
Sbjct: 426 IVSVLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMP 485
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E++++++ ++IL G+HG A F + E G D F+A+L AC H GLV+ G +
Sbjct: 486 EQDVVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ 545
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M +YG+ K EHY +V LLG AG+L+EA I ++ D V GALL C I+
Sbjct: 546 YFQCMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIH 605
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N +L E A LFE DP Y V+LSN YAE RW+DV KLR + + G++K+ G S
Sbjct: 606 CNIELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSV 665
Query: 549 VS 550
V+
Sbjct: 666 VA 667
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 126/412 (30%), Positives = 216/412 (52%), Gaps = 2/412 (0%)
Query: 61 FDKTPQRS-VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
F +T R+ +W I Y +N A L+ + RT + PD + + +AC SD
Sbjct: 76 FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L R VH I G D I +AL + Y+K ++ A +VFD + D+V N++I+G
Sbjct: 136 LQAGRKVHEDIIARGFESDVIVGTALASMYTKCGSLENARQVFDRMPKRDVVSWNAIIAG 195
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
++ G ++L LF M G P+ TLV ++ L G+ IH + ++S +S
Sbjct: 196 YSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGIESD 255
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
V + LV+MYA+C +N+A+ +F + D+ +W+A+I GYS + +AL +F ++ +
Sbjct: 256 VLVVNGLVNMYAKCGNVNTAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQV 315
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+G K + + + SVL A A + G IHGY I+ GFE + +V +ALV+MY+KCG +
Sbjct: 316 RGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKCGNVNS 375
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++FE M ++N++ +N++I G HG ++A F ++ +G+ PD ++L AC H
Sbjct: 376 AYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVSVLPACAH 435
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ G++I T G ++ +V + GN+ A +P+
Sbjct: 436 FLALEQGKQIHG-YTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPE 486
>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
Length = 706
Score = 351 bits (900), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 304/542 (56%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +S S + ++LH LV ++ L P LV +Y+ L AR LFD PQ
Sbjct: 117 VLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQID 176
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +WN +I Y +DA LF ++ +KPD+ T+ + +E+S L ++ +HG
Sbjct: 177 LVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHG 236
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G+ D +SAL+ Y K A K+F+ + D+V+ +MISG+ G
Sbjct: 237 YIVRHGVILDVYLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKD 296
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L++F W+L+ P+ T ++ + + +G+ +HG+ +K+ + V S +++
Sbjct: 297 ALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSAIMN 356
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ A+ +F + D + W+++IT +SQ G +A+Y FR++ M+G K D V
Sbjct: 357 MYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYDCVT 416
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+++ L+A A + G IHG++I+ FE + SAL++MY+KCG L + VF M
Sbjct: 417 VSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFNLMQ 476
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E+N + +NS+I G HG+ + F +++E+G+ PD TF +L +C H G V DG
Sbjct: 477 EKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVEDGVR 536
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F MTEEYGI A+ EHY M L G AG+L+EA+ I S+P P +V G LL C ++
Sbjct: 537 YFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGACRVH 596
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +LAE+ + L + +P+ Y ++L++ A+ G+W V K++ + + G++K G SW
Sbjct: 597 GNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPGCSW 656
Query: 549 VS 550
+
Sbjct: 657 IE 658
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/414 (32%), Positives = 215/414 (51%), Gaps = 2/414 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K + ++ + D F A+ L++LYA N + AR FDK + LWN +I Y
Sbjct: 30 KVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRFFDKMIDKDCVLWNVMINGYVQC 89
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACI-TRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ A LFK+++ ++ KPD+ T+AC+ + +CSE G R +HG + SGL +
Sbjct: 90 GESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMVEYG-RQLHGLVVRSGLDFVPLV 148
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ LVT YSK + +A K+FD + DLV+ N MI G+ GF D + LF+ M+ G
Sbjct: 149 GNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGI 208
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD T + L E S L + IHG+ ++ Y++S L+ +Y +C A
Sbjct: 209 KPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACK 268
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+FN D+V ++A+I+GY G AL FR L + + + +S+L A A A
Sbjct: 269 MFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAA 328
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +HGY+I++ E V SA+++MY+KCG L L +F +S ++ I +NS+I
Sbjct: 329 IKLGRELHGYIIKNELEEKCPVGSAIMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITS 388
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
G +A FR + +G+ D T SA L AC + ++ G+EI M +
Sbjct: 389 FSQDGKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIK 442
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/328 (29%), Positives = 176/328 (53%)
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD +T+ + + C+ +++ + + + G D +S+L+ Y+ I++A +
Sbjct: 8 PDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGCIEDARRF 67
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FD + D D VL N MI+G+ CG D +++LF M+ PD T ++S +++
Sbjct: 68 FDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSISCSEAMV 127
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
G+ +HG ++S D V + LV++Y++ + A +F+ + DLV W+ +I GY
Sbjct: 128 EYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVWNRMIGGY 187
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
Q G A F ++ G K D + S L + A+S+++ IHGY+++HG L V
Sbjct: 188 VQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGYIVRHGVILDV 247
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
++SAL+D+Y KC + ++F ++ +I+ Y ++I G L+G A E FR +++K
Sbjct: 248 YLNSALIDLYFKCRDAVMACKMFNLSTKFDIVIYTAMISGYVLNGMNKDALEIFRWLLQK 307
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREI 429
+ P+ TFS++L AC + GRE+
Sbjct: 308 KMIPNALTFSSILPACAGLAAIKLGREL 335
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 117/234 (50%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
ML G PD+YT +I + + +G+ I L+ FD +V+S L+ +YA C
Sbjct: 1 MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A F+ + D V W+ +I GY Q G+ A+ F+ + K D V A VL+
Sbjct: 61 IEDARRFFDKMIDKDCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLSI 120
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ A V G +HG V++ G + +V + LV +YSK LG ++F+ M + +++ +
Sbjct: 121 SCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKGRQLGDARKLFDMMPQIDLVVW 180
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
N +I G +GF A F ++I G+ PD TF++ L + + +EI
Sbjct: 181 NRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEI 234
>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 186/541 (34%), Positives = 290/541 (53%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S L +LH + L D A L+ +Y+ L +AR LFD +PQ
Sbjct: 165 VLSVCASEAMLDLGTQLHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSD 224
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN II Y +A+ LF+ ++ +KPD+ T+A +E L + +HG
Sbjct: 225 LVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHG 284
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D SAL+ Y K ++ A K+ S D V+C +MISG+ G +
Sbjct: 285 YIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKE 344
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+ F W+++ P T + + L++G+ +HG +K+ D +V S ++
Sbjct: 345 ALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILD 404
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ A VFN + D + W+++IT SQ G G+A+ FR++ M+G + D V
Sbjct: 405 MYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVS 464
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I+ L+A A + G IHG +I+ + S+L+DMY+KCG L +VF+ M
Sbjct: 465 ISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ 524
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
ERN +++NS+I G HG + F +++ G+ PD TF ++ AC H G V++G
Sbjct: 525 ERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIR 584
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
+ MTEEYGI A+ EHY + + G AG L+EA+ I S+P P D V G LL CHI+
Sbjct: 585 YYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPPDAGVWGTLLGACHIH 644
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +LAE+ + LF+ DP Y V+L+N A G+W V+K+R + + G+RK G SW
Sbjct: 645 GNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSW 704
Query: 549 V 549
+
Sbjct: 705 I 705
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 205/419 (48%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S+ K +H V L D F + L++LYA N L A+ LFD PQ+ LWN ++
Sbjct: 72 KSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVML 131
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y +A +F + +++KP++ T+AC+ C+ + L +HG A+ GL
Sbjct: 132 NGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCGLE 191
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
DS ++ L+ YSK + A K+FD DLV N +ISG+ G ++ LF M
Sbjct: 192 LDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM 251
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G PD T + + E L + IHG+ ++ + ++ S L+ +Y +C +
Sbjct: 252 ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDV 311
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A + D V + +I+GY G +AL FR L + K V +S+ A
Sbjct: 312 EMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAF 371
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A + G +HG +I+ + V SA++DMY+KCG L L +VF ++E++ I +N
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
S+I +G +A FR + +G D + S L AC + ++ G+EI M +
Sbjct: 432 SMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK 490
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 191/383 (49%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y L A+ LF WN +IR + + +FN A + +L + PD +T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
+ + +AC + + VH + GL D S+L+ Y++ + +A +FD +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
D VL N M++G+ G ++++F M P+ T ++S ++L +G
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+HG + + V++ L++MY++C C+ +A +F++ DLV+W+ +I+GY Q G
Sbjct: 181 LHGIAVSCGLELDSPVANTLLAMYSKCQCLQAARKLFDTSPQSDLVSWNGIISGYVQNGL 240
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
G+A + FR + G K D + AS L + ++ IHGY+I+H L V + SA
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+D+Y KC + + ++ S + + ++I G L+G +A E FR ++++ + P
Sbjct: 301 LIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 407 ESTFSALLCACCHGGLVNDGREI 429
TFS++ A +N G+E+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKEL 383
>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Cucumis sativus]
Length = 762
Score = 344 bits (883), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 287/542 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S L +LH + L D A L+ +Y+ L +AR LFD PQ
Sbjct: 165 VLSVCASEAMLDLGTQLHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSD 224
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN II Y +A+ LF+ ++ +KPD+ T+A +E L + +HG
Sbjct: 225 LVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHG 284
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D SAL+ Y K ++ A K S D V+C +MISG+ G +
Sbjct: 285 YIIRHAVVLDVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKE 344
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+ F W+++ P T + + L++G+ +HG +K+ D +V S ++
Sbjct: 345 ALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILD 404
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ A VFN + D + W+++IT SQ G G+A+ FR++ M+G + D V
Sbjct: 405 MYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVS 464
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I+ L+A A + G IHG +I+ + S+L+DMY+KCG L +VF+ M
Sbjct: 465 ISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQ 524
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E+N +++NS+I G HG + F +++ G+ PD TF ++ AC H G V++G
Sbjct: 525 EKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISACGHAGQVDEGIR 584
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
+ MTEEYGI A+ EHY + + G AG L EA+ I S+P P D V G LL CHI+
Sbjct: 585 YYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPPDAGVWGTLLGACHIH 644
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +LAE+ + LF+ DP Y V+L+N A G+W V+K+R + + G+RK G SW
Sbjct: 645 GNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRSIMKERGVRKVPGYSW 704
Query: 549 VS 550
+
Sbjct: 705 IE 706
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 125/419 (29%), Positives = 205/419 (48%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S+ K +H V L D F + L++LYA N L A+ LFD PQ+ LWN ++
Sbjct: 72 KSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIPQKDSVLWNVML 131
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y +A +F + +++KP++ T+AC+ C+ + L +HG A+ GL
Sbjct: 132 NGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCGLE 191
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
DS ++ L+ YSK + A K+FD + DLV N +ISG+ G ++ LF M
Sbjct: 192 LDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGM 251
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G PD T + + E L + IHG+ ++ + ++ S L+ +Y +C +
Sbjct: 252 ISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCRDV 311
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A D V + +I+GY G +AL FR L + K V +S+ A
Sbjct: 312 EMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPTSVTFSSIFPAF 371
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A + G +HG +I+ + V SA++DMY+KCG L L +VF ++E++ I +N
Sbjct: 372 AGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWN 431
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
S+I +G +A FR + +G D + S L AC + ++ G+EI M +
Sbjct: 432 SMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK 490
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 191/383 (49%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y L A+ LF WN +IR + + +FN A + +L + PD +T
Sbjct: 1 MYVRTGSLKDAKNLFYTLQLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKYT 60
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
+ + +AC + + VH + GL D S+L+ Y++ + +A +FD +
Sbjct: 61 FPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVGSSLIKLYAENGHLSDAQYLFDNIP 120
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
D VL N M++G+ G ++++F M P+ T ++S ++L +G
Sbjct: 121 QKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDLGTQ 180
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+HG + + V++ L++MY++C C+ +A +F++L DLV+W+ +I+GY Q G
Sbjct: 181 LHGIAVGCGLELDSPVANTLLAMYSKCQCLQAARKLFDTLPQSDLVSWNGIISGYVQNGL 240
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
G+A + FR + G K D + AS L + ++ IHGY+I+H L V + SA
Sbjct: 241 MGEAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVLDVFLKSA 300
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+D+Y KC + + + S + + ++I G L+G +A E FR ++++ + P
Sbjct: 301 LIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLVQERMKPT 360
Query: 407 ESTFSALLCACCHGGLVNDGREI 429
TFS++ A +N G+E+
Sbjct: 361 SVTFSSIFPAFAGLAALNLGKEL 383
>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 672
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 183/542 (33%), Positives = 288/542 (53%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S +LH LV DP A LV +Y+ L A LF+ P +
Sbjct: 79 VLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLSDALKLFNTMPDTN 138
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN +I + ++A LF ++ + PD+ T+A + +E++ L + +HG
Sbjct: 139 VVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASLKQGKEIHG 198
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G+ D SAL+ Y K + A K+F ++ D+V+C ++ISG+ G +
Sbjct: 199 YILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTAIISGYVLNGLNND 258
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L++F W+L +P+ TL ++ + L++G+ +H LK D +V S ++
Sbjct: 259 ALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHGLDERRHVGSAIMD 318
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ AY +F + D V W+A+IT SQ G +A+ FR++ +G D V
Sbjct: 319 MYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQMGREGLSYDCVS 378
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I++ L+A A + G IH ++I+ F+ V SAL+DMY KCG L + VF+ M
Sbjct: 379 ISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKCGNLSVARCVFDMMR 438
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E+N +++NS+I G HG + F ++E G+ PD TF +L AC H G V+ G +
Sbjct: 439 EKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQ 498
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F MTEEYGI A+ EHY +V L G AG L EA+ I ++P D V G LL C ++
Sbjct: 499 YFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSPDDGVWGTLLGACRVH 558
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +LAE+ + L + DP V+LSN +A+ G+W V K+R + G++K G SW
Sbjct: 559 GNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRSLMKKRGVQKVPGYSW 618
Query: 549 VS 550
+
Sbjct: 619 IE 620
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 244/472 (51%), Gaps = 10/472 (2%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F + L++LYA N + AR LFDK P + LWN ++ + N A +F+++
Sbjct: 6 DEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVFEDMR 65
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
Q KP++ T+A + C+ + +HG I G D + ++ALV YSK +
Sbjct: 66 NCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKFGQLS 125
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A+K+F+ + D ++V N MI+GF GF D++ LF M+ G +PD T + +
Sbjct: 126 DALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVT 185
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
E + L G+ IHG+ L+ ++ S L+ +Y +C + A +F + D+V +A
Sbjct: 186 ESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIVVCTA 245
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+GY G AL FR L + + V +ASVL A A A + G +H +++HG
Sbjct: 246 IISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG 305
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ V SA++DMY+KCG L L Q+F M E++ + +N++I +G +A + FR
Sbjct: 306 LDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFR 365
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKL 452
+ +GL+ D + SA L AC + ++ G+ I + M I+ + ++ ++ +
Sbjct: 366 QMGREGLSYDCVSISAALSACANLPALHHGKAIHSFM-----IKGAFDSEVFAESALIDM 420
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
G GNL A ++ + + + ++++ +G+ +++ + H++ E+
Sbjct: 421 YGKCGNLSVARC-VFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLED 471
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 194/376 (51%), Gaps = 6/376 (1%)
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D S+L+ Y++ I++A ++FD + + D VL N M++GF CG + ++++F
Sbjct: 2 GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
+ M P+ T ++S +L G +HG + F V++ LV+MY++
Sbjct: 62 EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
++ A +FN++ ++VTW+ +I G+ Q G +A F ++ G D + AS L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ +SA++ G IHGY+++HG L V + SAL+D+Y KC +G+ ++F+ + +I+
Sbjct: 182 PSVTESASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNVDIV 241
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++I G L+G A E FR ++E+ ++P+ T +++L AC +N G+E+ +
Sbjct: 242 VCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANI 301
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
++G+ + ++ + G L+ AY +P+ D A+++ C G
Sbjct: 302 L-KHGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEK-DAVCWNAIITNCSQNGKPQ- 358
Query: 494 AEIVAHQLFENDPRKG 509
A LF R+G
Sbjct: 359 ---EAIDLFRQMGREG 371
>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
Length = 862
Score = 341 bits (875), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 183/526 (34%), Positives = 301/526 (57%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH+L K L ++ A L+ +YA L A LF+ P+ + WN +I
Sbjct: 263 QLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNG 322
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
++A LF ++LR+ +PD+ T + A ++ + L + VHG I + + D+ S
Sbjct: 323 LLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVS 382
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
ALV Y K + A ++D D+V+ +++ISG+ G +K+LQ+F ++L P
Sbjct: 383 ALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKP 442
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+ T+ ++ S L +GQ IHG+ L+++++ YV S L+ MYA+C ++ ++++F
Sbjct: 443 NAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIF 502
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + D VTW+++I+ +SQ G+ +AL FR++ M+G K + V I+S L+A A ++
Sbjct: 503 SKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIY 562
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IHG +I+ + + SAL+DMY+KCG + L ++VFE M ++N +++NS+I G
Sbjct: 563 YGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYG 622
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG ++ F + E+G PD TF AL+ AC H GLV +G ++F MT+EY I +
Sbjct: 623 AHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRM 682
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EH+ MV L +G L++A FI +P D + GALL C ++ N +LA+I + +LF+
Sbjct: 683 EHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVELADIASQELFK 742
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP Y V++SN A GRWD V K+R + DN + K G SWV
Sbjct: 743 LDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWV 788
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 235/453 (51%), Gaps = 1/453 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++S + +H L D + + L+++Y+ +L AR FD P R LWN ++
Sbjct: 156 AVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLWNVMMD 215
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y A A LF+N+ + +P+ T AC C+ +DL +H A+ GL +
Sbjct: 216 GYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQ 275
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ ++ L++ Y+K +D+A ++F+ + DLV N MISG G D++L LF ML
Sbjct: 276 EVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGLFCDML 335
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G PD TLV L+ L + + L G+ +HG+ +++ ++ S LV +Y +C +
Sbjct: 336 RSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVR 395
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A +++++ D+V S +I+GY G KAL FR L Q K + V +ASVL A A
Sbjct: 396 TARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACA 455
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G IHGYV+++ +E V SAL+DMY+KCG L L +F MS ++ +T+NS
Sbjct: 456 SISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNS 515
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I +G +A + FR + +G+ + T S+ L AC + G+EI + +
Sbjct: 516 MISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKG- 574
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
I+A ++ + GN+E A +P
Sbjct: 575 PIKADIFAESALIDMYAKCGNMELALRVFEFMP 607
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 113/393 (28%), Positives = 191/393 (48%), Gaps = 5/393 (1%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAYALAHRFNDAKSLFKNLLR- 97
T+L+ +Y L A +F P+ S WN +IR + A + A + +
Sbjct: 74 TRLLGMYVLARRFRDAVAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTH 133
Query: 98 -TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
PD T + ++C+ + R VH A +GL D SAL+ YS L+
Sbjct: 134 PAAPSPDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLR 193
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A FDG+ D VL N M+ G+ G +++LF M G P+ TL +S
Sbjct: 194 DARDAFDGMPWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCA 253
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ L G +H +K + V++ L+SMYA+C C++ A+ +F L DLVTW+
Sbjct: 254 AEADLLSGVQLHSLAVKCGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNG 313
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+G Q G +AL F + G + D V + S+L A + G +HGY+I++
Sbjct: 314 MISGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNC 373
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ + SALVD+Y KC + +++ +++ ++VI G L+G + +A + FR
Sbjct: 374 VHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFR 433
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++E+ + P+ T +++L AC + G+EI
Sbjct: 434 YLLEQCIKPNAVTVASVLPACASISALPLGQEI 466
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 163/350 (46%), Gaps = 1/350 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + KE+H + + + D F + LV +Y + +AR L+D V + +++I
Sbjct: 359 LKQGKEVHGYIIRNCVHMDAFLVSALVDIYFKCRDVRTARNLYDAARAIDVVIGSTVISG 418
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y L A +F+ LL +KP+ T A + AC+ S LP + +HG + +
Sbjct: 419 YVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGK 478
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
SAL+ Y+K +D + +F +S D V NSMIS F+ G ++L LF M
Sbjct: 479 CYVESALMDMYAKCGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCM 538
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G + T+ +S + G+ IHG +K + + S L+ MYA+C M
Sbjct: 539 EGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMEL 598
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF + + V+W+++I+ Y G +++ + ++ +G K D V ++++A A
Sbjct: 599 ALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAH 658
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSA-LVDMYSKCGYLGLGIQVFETM 367
+ V G + + + M A +VD+YS+ G L IQ M
Sbjct: 659 AGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADM 708
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 125/277 (45%), Gaps = 12/277 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L +E+H V + + + + L+ +YA L + +F K +
Sbjct: 450 VLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKCGRLDLSHYIFSKMSLKD 509
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF--- 125
WNS+I +++ +A LF+ + +K +N T I+ A S + LP + +
Sbjct: 510 EVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVT---ISSALSACASLPAIYYGKE 566
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG I + D SAL+ Y+K ++ A++VF+ + D + V NS+IS + G
Sbjct: 567 IHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGL 626
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSFDSYDYVS- 243
+S+ M G PD T + LIS L V +G+ F C+ + +
Sbjct: 627 VKESVSFLHRMQEEGYKPDHVTFLALISACAHAGL--VEEGLQLFQCMTKEYLIAPRMEH 684
Query: 244 -SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ +V +Y+R ++ A + F PD W AL+
Sbjct: 685 FACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALL 721
>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
Length = 783
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 182/546 (33%), Positives = 304/546 (55%), Gaps = 3/546 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALV-AKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
++L+ + + + LH +V A D T+++ +Y++ +R++FDK +
Sbjct: 110 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 169
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRF 125
+++F WN+I+ AY F DA S+F L+ T+ KPDNFT C+ +AC+ DL +
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 229
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK-VFDGVSDPDLVLCNSMISGFAHCG 184
+HG A L D +AL+ Y K L++EA+K VFD + + N+++ G+A
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKRVFDLMDTKTVSSWNALLCGYAQNS 289
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
K+L L+ M G PD +T+ L+ L G+ IHGF L++ ++
Sbjct: 290 DPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGI 349
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+S+Y C +A +F+ + H LV+W+ +I GYSQ G +A+ FR++ G +
Sbjct: 350 SLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQP 409
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ I V A ++ + + G +H + ++ + VSS+++DMY+K G +GL ++F
Sbjct: 410 YEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIF 469
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ + E+++ ++N +I G G+HG +A E F ++ GL PD+ TF+ +L AC H GLV
Sbjct: 470 DRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLVE 529
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
DG E F +M + I+ K EHY +V +LG AG +++A I +P D + +LLS
Sbjct: 530 DGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLSS 589
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C I+GN L E VA++L E +P K V++SN +A G+WDDV ++R + D GL+K+A
Sbjct: 590 CRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKDA 649
Query: 545 GVSWVS 550
G SW+
Sbjct: 650 GCSWIE 655
>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
Length = 853
Score = 335 bits (858), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 182/540 (33%), Positives = 299/540 (55%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L + + L +LH+L K L + A L+ +YA L A LF+ PQ +
Sbjct: 249 LSVCATDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDL 308
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WN +I F +A LF ++ R+ +PD+ T + A ++ + L + VHG
Sbjct: 309 VTWNGMISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGY 368
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ + + D SALV Y K + A ++D D+V+ ++MISG+ G +++
Sbjct: 369 IVRNCVNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEA 428
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
LQ+F ++L P+ T+ ++ G + L +GQ IHG+ L+++++ YV S L+ M
Sbjct: 429 LQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDM 488
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C ++ ++++F + D VTW+++I+ +SQ G +AL FR++ M+G K + + I
Sbjct: 489 YAKCGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITI 548
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
++ L+A A ++ G IHG I+ + + SAL+DMY+KCG L L ++VFE M +
Sbjct: 549 SAALSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPD 608
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+N +++NS+I G HG ++ + E+G PD TF AL+ AC H GLV +G ++
Sbjct: 609 KNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQL 668
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F MT++Y I + EH+ MV L +G L++A FI +P D + GALL C ++
Sbjct: 669 FQCMTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHR 728
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N +LA+I + +LF+ DP Y V++SN A GRWD V K+R + DN + K G SWV
Sbjct: 729 NVELADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWV 788
Score = 221 bits (563), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 142/453 (31%), Positives = 235/453 (51%), Gaps = 1/453 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++S + +H L D + + LV++YA +L +AR FD P+R LWN ++
Sbjct: 156 AMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLWNVMMD 215
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A + A LF+N+ + +P+ T AC C+ ++DL +H A+ GL
Sbjct: 216 GCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEP 275
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ ++ L+ Y+K +D+A ++F+ + DLV N MISG G + ++ LF M
Sbjct: 276 EVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQ 335
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G PD TLV L+ L + + L G+ +HG+ +++ + ++ S LV +Y +C +
Sbjct: 336 RSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVNMDVFLVSALVDIYFKCRDVR 395
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +++++ D+V S +I+GY G +AL FR L Q K + V IASVL A
Sbjct: 396 MAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCA 455
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G IHGYV+++ +E V SAL+DMY+KCG L L +F MS+++ +T+NS
Sbjct: 456 SMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKDEVTWNS 515
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I +G +A + FR + +G+ + T SA L AC + G+EI +T +
Sbjct: 516 MISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHG-VTIKG 574
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
I+A ++ + GNLE A +P
Sbjct: 575 PIKADIFAESALIDMYAKCGNLELALRVFEFMP 607
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 192/393 (48%), Gaps = 5/393 (1%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAYALAHRFNDAKSLFKNLLR- 97
T+L+ +Y L A +F P+ S WN +IR + A + + A + +
Sbjct: 74 TRLLGMYVLARRFRDAVAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSH 133
Query: 98 -TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
PD T + ++C+ + R VH A GL D SALV Y+ L+
Sbjct: 134 PAAPSPDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLG 193
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A FDG+ + D VL N M+ G G D +++LF M G P+ TL +S
Sbjct: 194 NARDAFDGIPERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCA 253
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ L G +H +K + V++ L++MYA+C C++ A+ +F + DLVTW+
Sbjct: 254 TDADLLSGAQLHSLAVKCGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNG 313
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+G Q G + +A F + G + D + + S+L A + G +HGY++++
Sbjct: 314 MISGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNC 373
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ V + SALVD+Y KC + + +++ +++ +++I G L+G + +A + FR
Sbjct: 374 VNMDVFLVSALVDIYFKCRDVRMAQNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFR 433
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++E+ + P+ T +++L C + G++I
Sbjct: 434 YLLEQCIKPNAVTIASVLPGCASMAALPLGQQI 466
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L +++H V + + R + + L+ +YA L + +F K Q+
Sbjct: 450 VLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAKCGRLDLSHYIFLKMSQKD 509
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF--- 125
WNS+I +++ + +A LF+ + +K +N T + AC+ LP + +
Sbjct: 510 EVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAALSACAS---LPAIYYGKE 566
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG I + D SAL+ Y+K ++ A++VF+ + D + V NS+IS + G
Sbjct: 567 IHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGL 626
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSFDSYDYVS- 243
+S+ L M G PD T + LIS L V +G+ F C+ + +
Sbjct: 627 VKESVSLLHGMQEEGYKPDHVTFLALISACAHAGL--VEEGVQLFQCMTKKYLIAPRMEH 684
Query: 244 -SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ +V +Y+R ++ A + F PD W AL+
Sbjct: 685 FACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALL 721
>gi|147838932|emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
Length = 760
Score = 335 bits (858), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 200/614 (32%), Positives = 304/614 (49%), Gaps = 70/614 (11%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H ++ L+ + SLS+T++ HA + K L D ATKL+ YA N A ++ D P
Sbjct: 16 HTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVP 75
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ +VF ++++I A++ H+F+ A S F +L L PDN +AC+ S L R
Sbjct: 76 EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD---------------- 169
VHG A VSG DS S+LV Y K + I +A +VFD + +PD
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195
Query: 170 -------------------LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
L+ N MI+GF H G + +++ +F M G PD T+
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISS 255
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++ + + L +G IHG+ +K S VSS L+ MY +C+C + VF+ + H D
Sbjct: 256 VLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMD 315
Query: 271 -----------------------------------LVTWSALITGYSQQGDYGKALYYFR 295
+V+W+++I SQ G +AL FR
Sbjct: 316 VGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFR 375
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ + G K + V I +L A A + G H + ++ G V V SAL+DMY+KCG
Sbjct: 376 EMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCG 435
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ F+ + +N++ +N+VI G +HG +A E F + G PD +F+ +L
Sbjct: 436 RIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLS 495
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC GL +G F M+ +YGI+A+ EHY MV LL AG LE+AY+ I +P D
Sbjct: 496 ACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDA 555
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
V GALLS C ++ N L E+ A +LFE +P ++LSN YA G W++V ++RD +
Sbjct: 556 CVWGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMM 615
Query: 536 VDNGLRKEAGVSWV 549
+ GLRK G SW+
Sbjct: 616 KNKGLRKNPGCSWI 629
>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
Length = 758
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 199/608 (32%), Positives = 301/608 (49%), Gaps = 70/608 (11%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L+ + SLS+T++ HA + K L D ATKL+ YA N A ++ D P+ +VF
Sbjct: 22 LNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNVFS 81
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
++++I A++ H+F+ A S F +L L PDN +AC+ S L R VHG A
Sbjct: 82 FSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD---------------------- 169
VSG DS S+LV Y K + I +A +VFD + +PD
Sbjct: 142 VSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKR 201
Query: 170 -------------LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
L+ N MI+GF H G + +++ +F M G PD T+ ++ +
Sbjct: 202 LFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVG 261
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD------ 270
+ L +G IHG+ +K S VSS L+ MY +C+C + VF+ + H D
Sbjct: 262 DLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNA 321
Query: 271 -----------------------------LVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+V+W+++I SQ G +AL FR++ + G
Sbjct: 322 FIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAG 381
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
K + V I +L A A + G H + ++ G V V SAL+DMY+KCG +
Sbjct: 382 VKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASR 441
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
F+ + +N++ +N+VI G +HG +A E F + G PD +F+ +L AC G
Sbjct: 442 ICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSG 501
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
L +G F M+ +YGI+A+ EHY MV LL AG LE+AY+ I +P D V GAL
Sbjct: 502 LTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACVWGAL 561
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
LS C ++ N L E+ A +LFE +P ++LSN YA G W++V ++RD + + GLR
Sbjct: 562 LSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLR 621
Query: 542 KEAGVSWV 549
K G SW+
Sbjct: 622 KNPGCSWI 629
>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 701
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 193/546 (35%), Positives = 309/546 (56%), Gaps = 4/546 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+L+ + +SL++ +LHA V +L R+ + ATKL YA+ +P A+ +FD+ +
Sbjct: 28 LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ FLWNS+IR YA + + A L+ +L KPDNFTY + +AC + R VH
Sbjct: 88 NSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVH 147
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+V GL D +++++ Y K ++ A VFD + DL N+M+SGF G
Sbjct: 148 ALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTMMSGFVKNGEAR 207
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK---SSFDSYDYVSS 244
+ ++F M R G D TL+ L+S + L VG+ IHG+ ++ S ++ +
Sbjct: 208 GAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGFLMN 267
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
++ MY C ++ A +F L D+V+W++LI+GY + GD +AL F ++ + G
Sbjct: 268 SIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVP 327
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D V + SVLAA + + + GA + YV++ G+ ++V+V +AL+ MY+ CG L +VF
Sbjct: 328 DEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSLVCACRVF 387
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ M E+N+ ++ G G+HG +A F +++ KG+ PDE F+A+L AC H GLV+
Sbjct: 388 DEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVD 447
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+G+EIF +MT +Y ++ + HY +V LLG AG L+EAY+ I ++ + V ALLS
Sbjct: 448 EGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDVWTALLSA 507
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C ++ N LA I A +LFE +P + V LSN YA + RW+DV +R + LRK
Sbjct: 508 CRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVENVRALVAKRRLRKPP 567
Query: 545 GVSWVS 550
S+V
Sbjct: 568 SYSFVE 573
>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 736
Score = 332 bits (851), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 182/536 (33%), Positives = 304/536 (56%), Gaps = 2/536 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFY-ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
+S + ++LHA + S+L + Y TKL YA ++ A ++FD ++ FLWN +
Sbjct: 73 KSFKQGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFM 132
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
IR YA + L++ +L + DNFTY + +AC + + R VH +V GL
Sbjct: 133 IRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGL 192
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++L+ Y+K + A VFD +++ DL N+MISG+A + +FD
Sbjct: 193 ESDIYVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDL 252
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCN 254
M + G D TL+GL+S + + G+ IHG+ +++S +Y+ + ++ L+ MY CN
Sbjct: 253 MGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCN 312
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
CM A +F + D V+W+++I GY++ GD ++L FR++ + G D V +VL
Sbjct: 313 CMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLG 372
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + A + G IH Y+++ GF+ + +V +ALVDMYSKCG L +VF+ M ++++++
Sbjct: 373 ACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVS 432
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+++++ G GLHG +A + + PD F+++L AC H GLV +G+EIF +M
Sbjct: 433 WSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKME 492
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+EY ++ HY MV LLG AG+L+EAY I ++ + ALL+ ++ N LA
Sbjct: 493 KEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLHKNIKLA 552
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
EI A ++F+ +P+ + + LSN YA + RWDDV ++R + GL+K G S++
Sbjct: 553 EISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGLKKSPGCSFIE 608
>gi|449465795|ref|XP_004150613.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 603
Score = 332 bits (850), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 175/550 (31%), Positives = 305/550 (55%), Gaps = 12/550 (2%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF-DKTPQRS 68
L+ HQ+L++ K+LH+L+ P T L+ +Y+ + A ++F D +R+
Sbjct: 18 LQSCADHQNLNKGKQLHSLMITYGFSPSPPSITSLINMYSKCGQMGEAILVFYDPCHERN 77
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
VF +N+II + + +K + + PD +T+ C+ R C E ++ + +HG
Sbjct: 78 VFAYNAIISGFVSNGLASKGFQFYKKMRLEGVMPDKYTFPCVVRTCCEVMEV---KKIHG 134
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GL D SALV Y K +++A KVF +S D+VL N+MI+G+A G D+
Sbjct: 135 CLLKMGLELDVFVGSALVNTYLKNGSMEDAQKVFGELSIRDVVLWNAMINGYAKIGCLDE 194
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L++F M G P +T+ G++S L G+ +HG +K +DS VS+ L+
Sbjct: 195 ALEVFRRMHVKGVAPSRFTITGILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALID 254
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + A +F + D+ +W+++I+ + Q GD+ L F K+ G D V
Sbjct: 255 MYGKCKHIGDALIIFEMINEKDIFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVT 314
Query: 309 IASVLAAAAKSANVWPGAVIHGYVI--------QHGFELSVMVSSALVDMYSKCGYLGLG 360
I +VL A + A + G IHGY+I ++G +++VS+A++DMY+KCG +
Sbjct: 315 ITTVLPACSHLAALMHGREIHGYMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNA 374
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+++F++MS++++ ++N +I+G G+HG+ +A F + E P+E T +L AC H
Sbjct: 375 LKIFDSMSKKDVASWNIMIMGYGMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHA 434
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
G V+ GR +M +G+ EHY ++ +LG AG+LE+AY + +P +P V A
Sbjct: 435 GFVSHGRLFLAQMESTFGVIPTIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRA 494
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LL C ++GN++LAEI A Q+ + +P V++SN Y GR+++V+++R + + +
Sbjct: 495 LLGACRLHGNAELAEIAARQVLQLEPEHCGSYVLMSNVYGVIGRYEEVLEVRKTMKEQNV 554
Query: 541 RKEAGVSWVS 550
+K G SW+
Sbjct: 555 KKTPGCSWIE 564
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 133/289 (46%), Gaps = 12/289 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S L K +H +V K + L+ +Y + A I+F+ ++
Sbjct: 217 ILSVFASRGDLDNGKTVHGIVMKMGYDSGVSVSNALIDMYGKCKHIGDALIIFEMINEKD 276
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+F WNSII + + LF +L + + PD T + ACS + L R +HG
Sbjct: 277 IFSWNSIISVHEQCGDHDGTLRLFDKMLGSGILPDLVTITTVLPACSHLAALMHGREIHG 336
Query: 129 GAIVSGLGRDS--------ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
I++GLG+D + S+A++ Y+K ++ A+K+FD +S D+ N MI G+
Sbjct: 337 YMIINGLGKDDENGAVDNLLVSNAVMDMYAKCGSMNNALKIFDSMSKKDVASWNIMIMGY 396
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G+ ++L +F M P+E TLVG++S +S G+ + ++S+F
Sbjct: 397 GMHGYALEALGMFSQMCEAEFKPNEVTLVGVLSACNHAGFVSHGR-LFLAQMESTFGVIP 455
Query: 241 YVS--SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
+ + ++ M R + AY + + + V W AL+ G+
Sbjct: 456 TIEHYTCVIDMLGRAGHLEDAYEIVQKMPIQANPVVWRALLGACRLHGN 504
>gi|356495448|ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 329 bits (844), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 190/577 (32%), Positives = 304/577 (52%), Gaps = 35/577 (6%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
LH L+ + S S+ R K +HA + L KL+ L L A +LFD+
Sbjct: 41 TLHHLLDQCS----SMKRLKLVHAQIILHGLAAQVVTLGKLLSLCVQEGDLRYAHLLFDQ 96
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
PQ + F++N +IR Y+ ++ + LF+ ++ P+ FT+ + +AC+
Sbjct: 97 IPQPNKFMYNHLIRGYSNSNDPMKSLLLFRQMVSAGPMPNQFTFPFVLKACAAKPFYWEA 156
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
VH AI G+G + +A++TAY LI A +VFD +SD +V NSMI+G++
Sbjct: 157 VIVHAQAIKLGMGPHACVQNAILTAYVACRLILSARQVFDDISDRTIVSWNSMIAGYSKM 216
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
GF D+++ LF ML+LG D +TLV L+S + L +G+ +H + + + + V+
Sbjct: 217 GFCDEAILLFQEMLQLGVEADVFTLVSLLSASSKHCNLDLGRFVHLYIVITGVEIDSIVT 276
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS--------------------- 282
+ L+ MYA+C + A HVF+ + D+V+W++++ Y+
Sbjct: 277 NALIDMYAKCGHLQFAKHVFDQMLDKDVVSWTSMVNAYANQGLVENAVQIFNHMPVKNVV 336
Query: 283 ----------QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
Q+G Y +A+ F ++ + G D + S+L+ + + ++ G H Y+
Sbjct: 337 SWNSIICCLVQEGQYTEAVELFHRMCISGVMPDDATLVSILSCCSNTGDLALGKQAHCYI 396
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+ +SV + ++L+DMY+KCG L I +F M E+N++++N +I L LHGF +A
Sbjct: 397 CDNIITVSVTLCNSLIDMYAKCGALQTAIDIFFGMPEKNVVSWNVIIGALALHGFGEEAI 456
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
E F+ + GL PDE TF+ LL AC H GLV+ GR F M + I EHY MV L
Sbjct: 457 EMFKSMQASGLYPDEITFTGLLSACSHSGLVDMGRYYFDIMISTFRISPGVEHYACMVDL 516
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG G L EA + I +P D V GALL C IYGN ++A+ + QL E
Sbjct: 517 LGRGGFLGEAMTLIQKMPVKPDVVVWGALLGACRIYGNLEIAKQIMKQLLELGRFNSGLY 576
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN Y+E RWDD+ K+R + D+G++K +S++
Sbjct: 577 VLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRAISFI 613
>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Vitis vinifera]
Length = 824
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 185/521 (35%), Positives = 288/521 (55%), Gaps = 2/521 (0%)
Query: 30 AKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAK 89
AK R+ K +R + V SAR LFD+ R V WNS+I Y
Sbjct: 178 AKIGNFRESLSLFKRMRELGIRRV-ESARKLFDELGDRDVISWNSMISGYVSNGLSEKGL 236
Query: 90 SLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY 149
LF+ +L + D T + CS L R +HG AI + G++ ++ L+ Y
Sbjct: 237 DLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMY 296
Query: 150 SKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV 209
SK ++ AI+VF+ + + +V SMI+G+A G D S++LF M + G +PD +T+
Sbjct: 297 SKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTIT 356
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
++ LL G+ +H + ++ S +VS+ L+ MYA+C M A+ VF+ +
Sbjct: 357 TILHACACTGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVK 416
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D+V+W+ +I GYS+ +AL F ++ K + + +A +L A A A + G IH
Sbjct: 417 DIVSWNTMIGGYSKNSLPNEALNLFVEMQYNSK-PNSITMACILPACASLAALERGQEIH 475
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
G+++++GF L V++ALVDMY KCG LGL +F+ + E++++++ +I G G+HG+
Sbjct: 476 GHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGS 535
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+A F ++ G+ PDE +F ++L AC H GL+++G F M I+ K+EHY +
Sbjct: 536 EAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACI 595
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
V LL AGNL +AY FI +P D + GALL C IY + LAE VA +FE +P
Sbjct: 596 VDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENT 655
Query: 510 AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
Y V+L+N YAE +W++V KLR+ I GLRK G SW+
Sbjct: 656 GYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSWIE 696
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 184/386 (47%), Gaps = 52/386 (13%)
Query: 95 LLRTQLKPDN--FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY--- 149
L+ KPD TY + + C++ + R +H + + D + S LV Y
Sbjct: 90 LINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTC 149
Query: 150 -----------------------------------SKLSL-----------IDEAIKVFD 163
LSL ++ A K+FD
Sbjct: 150 GDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELGIRRVESARKLFD 209
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D D++ NSMISG+ G +K L LF+ ML LG D T+V +++G +L +
Sbjct: 210 ELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLL 269
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +HG+ +K+SF +++ L+ MY++ +NSA VF ++ +V+W+++I GY++
Sbjct: 270 GRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAR 329
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+G ++ F ++ +G D I ++L A A + + G +H Y+ ++ + + V
Sbjct: 330 EGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVHNYIKENKMQSDLFV 389
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S+AL+DMY+KCG +G VF M ++I+++N++I G + +A F + ++
Sbjct: 390 SNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVE-MQYNS 448
Query: 404 NPDESTFSALLCACCHGGLVNDGREI 429
P+ T + +L AC + G+EI
Sbjct: 449 KPNSITMACILPACASLAALERGQEI 474
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L R +E+H + + D A LV +Y L AR+LFD P++
Sbjct: 458 ILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIPEKD 517
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ W +I Y + ++A + F + + ++PD ++ I ACS
Sbjct: 518 LVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACS 564
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 75/172 (43%), Gaps = 20/172 (11%)
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHGYVIQH 335
I + + G+ +A+ +L Q K D L SVL A ++ G IH + +
Sbjct: 75 ICRFCELGNLRRAM----ELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSN 130
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
E+ ++ S LV MY CG L G ++F+ ++ + +N ++ G G ++ F
Sbjct: 131 DVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLF 190
Query: 396 RDIIEKGLNPDES--------------TFSALLCACCHGGLVNDGREIFTRM 433
+ + E G+ ES ++++++ GL G ++F +M
Sbjct: 191 KRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQM 242
>gi|15233590|ref|NP_193861.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207660|sp|Q9STE1.1|PP333_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21300
gi|3402749|emb|CAA20195.1| putative protein [Arabidopsis thaliana]
gi|7268926|emb|CAB79129.1| putative protein [Arabidopsis thaliana]
gi|332659037|gb|AEE84437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 857
Score = 328 bits (840), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 175/542 (32%), Positives = 295/542 (54%), Gaps = 1/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S + +LH LV + + + L+ +Y+ A LF +
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +I Y + ++ + F ++ + + PD T++ + + S+ +L + +H
Sbjct: 305 TVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHC 364
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + D +SAL+ AY K + A +F + D+V+ +MISG+ H G +
Sbjct: 365 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYID 424
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
SL++F W++++ +P+E TLV ++ + L +G+ +HGF +K FD+ + ++
Sbjct: 425 SLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVID 484
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C MN AY +F L D+V+W+++IT +Q + A+ FR++ + G D V
Sbjct: 485 MYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVS 544
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I++ L+A A + G IHG++I+H V S L+DMY+KCG L + VF+TM
Sbjct: 545 ISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK 604
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK-GLNPDESTFSALLCACCHGGLVNDGR 427
E+NI+++NS+I G HG + F +++EK G+ PD+ TF ++ +CCH G V++G
Sbjct: 605 EKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGV 664
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F MTE+YGIQ + EHY +V L G AG L EAY + S+P P D V G LL C +
Sbjct: 665 RFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRL 724
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ N +LAE+ + +L + DP Y V++SN +A W+ V K+R + + ++K G S
Sbjct: 725 HKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYS 784
Query: 548 WV 549
W+
Sbjct: 785 WI 786
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 206/409 (50%), Gaps = 2/409 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+L+ + L + K++HA + S+ D + +++ +YA+ +F + R
Sbjct: 40 LLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLR 99
Query: 68 --SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
S+ WNSII ++ N A + + +L + PD T+ C+ +AC + G+ F
Sbjct: 100 RSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+ G+ + +S+L+ AY + ID K+FD V D V+ N M++G+A CG
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D ++ F M +P+ T ++S L+ +G +HG + S D + +
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNS 279
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+SMY++C + A +F + D VTW+ +I+GY Q G ++L +F ++ G D
Sbjct: 280 LLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPD 339
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ +S+L + +K N+ IH Y+++H L + ++SAL+D Y KC + + +F
Sbjct: 340 AITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFS 399
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ +++ + ++I G +G + E FR +++ ++P+E T ++L
Sbjct: 400 QCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSIL 448
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
P ++ +L A + + G +H ++I + ++ MY+ CG ++F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 366 TMSER--NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ R +I +NS+I +G QA F+ ++ G++PD STF L+ AC
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKAC 148
>gi|357115175|ref|XP_003559367.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Brachypodium distachyon]
Length = 849
Score = 327 bits (839), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 290/526 (55%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH L K L + A LV +YA L A LF P+ + WN +I
Sbjct: 269 QLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNG 328
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+DA LF ++ ++ L+PD+ T A + A +E + + +HG + + D S
Sbjct: 329 LVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVS 388
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
ALV Y K + A VFD D+V+ ++MISG+ + ++++F ++L LG P
Sbjct: 389 ALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKP 448
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+ + + + + +GQ +HG+ LK++++ YV S L+ MY++C ++ ++++F
Sbjct: 449 NAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMF 508
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + D VTW+++I+ ++Q G+ +AL FR++ M+G K + V I+S+L+A A ++
Sbjct: 509 SKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIY 568
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IHG +I+ + SAL+DMY KCG L L ++VFE M E+N +++NS+I G
Sbjct: 569 YGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRVFEHMPEKNEVSWNSIISAYG 628
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG ++ + + E+G D TF AL+ AC H G V +G +F MTEEY I+ +
Sbjct: 629 AHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQVQEGLRLFRCMTEEYHIEPQV 688
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EH MV L AG L++A FI +P D + GALL C ++ N +LAEI + +LF+
Sbjct: 689 EHLSCMVDLYSRAGKLDKAMQFIADMPFKPDAGIWGALLHACRVHRNVELAEIASQELFK 748
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP Y V++SN A GRWD V K+R + D ++K G SWV
Sbjct: 749 LDPHNCGYYVLMSNINAVAGRWDGVSKMRRLMKDKKVQKIPGYSWV 794
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 141/447 (31%), Positives = 227/447 (50%), Gaps = 1/447 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L RD + + L+++YA +L AR +FD +R LWN ++ Y A
Sbjct: 169 VHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERDCVLWNVMMDGYVKAGD 228
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A LF+ + + P+ T AC C+ +DL +H A+ GL + ++
Sbjct: 229 VASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHTLAVKYGLEPEVAVANT 288
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV+ Y+K ++EA ++F + DLV N MISG G D +L+LF M + G PD
Sbjct: 289 LVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNGLVDDALRLFCDMQKSGLQPD 348
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TL L+ L E + G+ IHG+ +++ ++ S LV +Y +C + A +VF+
Sbjct: 349 SVTLASLLPALTELNGFKQGKEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFD 408
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+V S +I+GY A+ FR L G K + V++AS L A A A +
Sbjct: 409 ATKSIDVVIGSTMISGYVLNRMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRI 468
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +HGYV+++ +E V SAL+DMYSKCG L L +F MS ++ +T+NS+I
Sbjct: 469 GQELHGYVLKNAYEGRCYVESALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQ 528
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+G +A + FR +I +G+ + T S++L AC + G+EI + + I+A
Sbjct: 529 NGEPEEALDLFRQMIMEGVKYNNVTISSILSACAGLPAIYYGKEIHGIIIKG-PIRADLF 587
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPK 471
++ + G GNLE A +P+
Sbjct: 588 AESALIDMYGKCGNLELALRVFEHMPE 614
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 190/393 (48%), Gaps = 5/393 (1%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSV---FLWNSIIRAYALAHRFNDAKSLFKNLLR- 97
T+LV +Y L A +F P+ + WN +IR + +A A + +
Sbjct: 80 TRLVGMYVLARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAH 139
Query: 98 -TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ +PD T + ++C+ L R VH GL RD SAL+ Y+ L+D
Sbjct: 140 PSSPRPDGHTLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLD 199
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +VFDG+ + D VL N M+ G+ G ++ LF M G P+ TL +S
Sbjct: 200 GAREVFDGMDERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCA 259
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ L G +H +K + V++ LVSMYA+C C+ A+ +F + DLVTW+
Sbjct: 260 AEADLLSGVQLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNG 319
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+G Q G AL F + G + D V +AS+L A + G IHGY++++
Sbjct: 320 MISGCVQNGLVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEIHGYIVRNC 379
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ V + SALVD+Y KC + + VF+ +++ +++I G L+ + A + FR
Sbjct: 380 AHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLNRMSEAAVKMFR 439
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ G+ P+ ++ L AC + G+E+
Sbjct: 440 YLLALGIKPNAVMVASTLPACASMAAMRIGQEL 472
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 149/343 (43%), Gaps = 12/343 (3%)
Query: 98 TQLKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGL-----GRDSITSSALVTAYSK 151
T P + + R C S LP GLR +H A+ SGL + + LV Y
Sbjct: 30 TNASPCAYRLLALLRGCVAPSHLPLGLR-IHARAVTSGLLDAAGPGPAALQTRLVGMYVL 88
Query: 152 LSLIDEAIKVFDGVSDPDLVLC---NSMISGFAHCGFWDKSLQLF--DWMLRLGKTPDEY 206
+A+ VF + N +I GF G ++ + W PD +
Sbjct: 89 ARRFRDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGH 148
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
TL ++ L +G+ +H D YV S L+ MYA ++ A VF+ +
Sbjct: 149 TLPYVVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGM 208
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGA 326
D V W+ ++ GY + GD A+ FR + G + +A L+ A A++ G
Sbjct: 209 DERDCVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGV 268
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
+H +++G E V V++ LV MY+KC L ++F M +++T+N +I G +G
Sbjct: 269 QLHTLAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPRDDLVTWNGMISGCVQNG 328
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
A F D+ + GL PD T ++LL A G+EI
Sbjct: 329 LVDDALRLFCDMQKSGLQPDSVTLASLLPALTELNGFKQGKEI 371
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 159/346 (45%), Gaps = 1/346 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H + + D F + LV +Y + A+ +FD T V + +++I Y L
Sbjct: 369 KEIHGYIVRNCAHVDVFLVSALVDIYFKCRDVRMAQNVFDATKSIDVVIGSTMISGYVLN 428
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A +F+ LL +KP+ A AC+ + + + +HG + +
Sbjct: 429 RMSEAAVKMFRYLLALGIKPNAVMVASTLPACASMAAMRIGQELHGYVLKNAYEGRCYVE 488
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL+ YSK +D + +F +S D V NSMIS FA G +++L LF M+ G
Sbjct: 489 SALMDMYSKCGRLDLSHYMFSKMSAKDEVTWNSMISSFAQNGEPEEALDLFRQMIMEGVK 548
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+ T+ ++S + G+ IHG +K + + S L+ MY +C + A V
Sbjct: 549 YNNVTISSILSACAGLPAIYYGKEIHGIIIKGPIRADLFAESALIDMYGKCGNLELALRV 608
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + + V+W+++I+ Y G +++ + +G KAD V ++++A A + V
Sbjct: 609 FEHMPEKNEVSWNSIISAYGAHGLVKESVDLLCCMQEEGFKADHVTFLALISACAHAGQV 668
Query: 323 WPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
G + ++ E V S +VD+YS+ G L +Q M
Sbjct: 669 QEGLRLFRCMTEEYHIEPQVEHLSCMVDLYSRAGKLDKAMQFIADM 714
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 122/280 (43%), Gaps = 11/280 (3%)
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-----DSYDYVSSVLVSMYARCNCM 256
+P Y L+ L+ G PS L +G IH + S + + LV MY
Sbjct: 33 SPCAYRLLALLRGCVAPSHLPLGLRIHARAVTSGLLDAAGPGPAALQTRLVGMYVLARRF 92
Query: 257 NSAYHVFNSL---FHPDLVTWSALITGYSQQGDYGKALYYFRKL--NMQGKKADPVLIAS 311
A VF+SL + W+ LI G++ G + A+ ++ K+ + + D +
Sbjct: 93 RDAVAVFSSLPRAAAAAALPWNWLIRGFTMAGHHRLAVLFYVKMWAHPSSPRPDGHTLPY 152
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
V+ + A + G ++H G + + V SAL+ MY+ G L +VF+ M ER+
Sbjct: 153 VVKSCAALGALHLGRLVHRTTRALGLDRDMYVGSALIKMYADAGLLDGAREVFDGMDERD 212
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +N ++ G G A FR + G +P+ +T + L C + G ++ T
Sbjct: 213 CVLWNVMMDGYVKAGDVASAVGLFRVMRASGCDPNFATLACFLSVCAAEADLLSGVQLHT 272
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ +YG++ + +V + LEEA+ +P+
Sbjct: 273 -LAVKYGLEPEVAVANTLVSMYAKCQCLEEAWRLFGLMPR 311
>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
Length = 771
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 175/534 (32%), Positives = 292/534 (54%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL + +E+HA + K+ + + + L+ +YA L AR +FD R++ W ++I
Sbjct: 110 RSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMI 169
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A+ ++ +A ++ + KPD T+ + A + L + VH +GL
Sbjct: 170 EAFVAGNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLE 229
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ ++LV Y+K I +A +FD + + ++V +I+G+A G D +L+L + M
Sbjct: 230 LEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKM 289
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ P++ T ++ G P L G+ +H + ++S + +V + L++MY +C +
Sbjct: 290 QQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGL 349
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F L H D+VTW+A++TGY+Q G + +A+ FR++ QG K D + S L +
Sbjct: 350 KEARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSC 409
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ A + G IH ++ G+ L V + SALV MY+KCG + VF MSERN++ +
Sbjct: 410 SSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWT 469
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I G HG +A E+F + ++G+ PD+ TF+++L AC H GLV +GR+ F M +
Sbjct: 470 AMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLD 529
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
YGI+ EHY V LLG AG+LEEA + I ++P P+V GALLS C I+ + + E
Sbjct: 530 YGIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGER 589
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A + + DP V LSN YA GR++D K+R + + KE G SW+
Sbjct: 590 AAENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIE 643
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 176/350 (50%)
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R +A + ++ + + + + + C+ L R VH + SG+ + +
Sbjct: 76 RLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 135
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L++ Y+K + +A +VFDG+ D ++V +MI F ++ + ++ M G P
Sbjct: 136 TLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCKP 195
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D+ T V L++ P LL VGQ +H K+ + V + LV MYA+C ++ A +F
Sbjct: 196 DKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIF 255
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L ++VTW+ LI GY+QQG AL K+ + + S+L +
Sbjct: 256 DKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALE 315
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H Y+IQ G+ + V +AL+ MY KCG L ++F + R+++T+ +++ G
Sbjct: 316 HGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTGYA 375
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
GF +A + FR + ++G+ PD+ TF++ L +C + +G+ I ++
Sbjct: 376 QLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL 425
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 9/291 (3%)
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++L + + M+ G GL+ L G+ +H LKS Y+
Sbjct: 75 GRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 134
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+SMYA+C + A VF+ + ++V+W+A+I + +A + + + G K
Sbjct: 135 NTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNLEAYKCYETMKLAGCK 194
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D V S+L A + G +H + + G EL V ++LV MY+KCG + +
Sbjct: 195 PDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVI 254
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ + E+N++T+ +I G G A E + + + P++ T++++L C +
Sbjct: 255 FDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLAL 314
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLL----GLAGNLEEAYSFIWSLP 470
G+++ Y IQ+ I++V L G L+EA LP
Sbjct: 315 EHGKKV-----HRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLP 360
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/202 (21%), Positives = 98/202 (48%), Gaps = 1/202 (0%)
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D + S ++ +QG +AL + +QG + + +L A+ ++ G +H
Sbjct: 60 DTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVH 119
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
+++ G + + + + L+ MY+KCG L +VF+ + +RNI+++ ++I
Sbjct: 120 AAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDGIRDRNIVSWTAMIEAFVAGNQNL 179
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+A++ + + G PD+ TF +LL A + L+ G+++ + + G++ + +
Sbjct: 180 EAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKA-GLELEPRVGTSL 238
Query: 450 VKLLGLAGNLEEAYSFIWSLPK 471
V + G++ +A LP+
Sbjct: 239 VGMYAKCGDISKAQVIFDKLPE 260
>gi|225463424|ref|XP_002272240.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Vitis vinifera]
Length = 629
Score = 325 bits (833), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 296/548 (54%), Gaps = 10/548 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF-DKTPQRS 68
L+ S H++LS+ KE+H+ + L P T L+ +Y+ N + A +F D T + +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
VF +N+II + + ++ + + PD FT+ C +AC D+ ++ +HG
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHG 160
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
GL D SALV Y K L++ A F+ + D+VL N+M++G+A G ++
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+ F M P +T+ G++S L+ G+ IHGF +K +DS VS+ L+
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C C+ A +F + D+ +W+++++ + Q GD+ L ++ G + D V
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 340
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELS------VMVSSALVDMYSKCGYLGLGIQ 362
+ +VL A + A + G IHGY+I G V++ +A++DMY+KCG +
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VFE MS +++ ++N +I+G G+HG+ +A E F + E L PDE TF +L AC H G
Sbjct: 401 VFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGF 460
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V+ GR +M +Y + EHY ++ +LG AG L+EAY ++P +P V ALL
Sbjct: 461 VSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
+ C ++ ++ LAE+ A ++FE +P V++SN Y GR+++V+++R + +RK
Sbjct: 521 AACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRK 580
Query: 543 EAGVSWVS 550
G SW+
Sbjct: 581 TPGCSWIE 588
>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 723
Score = 325 bits (832), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 175/535 (32%), Positives = 296/535 (55%), Gaps = 1/535 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL + +E+HA + K+ + + + L+ +YA L AR +FD R++ W ++I
Sbjct: 61 RSLEQGREVHAAILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMI 120
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A+ ++ +A ++ + KPD T+ + A + L + VH + +GL
Sbjct: 121 EAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLE 180
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ ++LV Y+K I +A +FD + + ++V +I+G+A G D +L+L + M
Sbjct: 181 LEPRVGTSLVGMYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETM 240
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ P++ T ++ G P+ L G+ +H + ++S + +V + L++MY +C +
Sbjct: 241 QQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGL 300
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F+ L H D+VTW+A++TGY+Q G + +A+ FR++ QG K D + SVL +
Sbjct: 301 EEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSC 360
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ A + G IH ++ G+ L V + SALV MY+KCG + VF MSERN++ +
Sbjct: 361 SSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWT 420
Query: 377 SVILG-LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++I G HG +A E+F + ++G+ PD+ TF+++L AC H GLV +GR+ F M
Sbjct: 421 AIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYL 480
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+YGI+ EHY V LLG AG+LEEA + I S+P P+V GALLS C ++ + + E
Sbjct: 481 DYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGE 540
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A + + DP V LS+ YA GR++D K+R + + KE G SW+
Sbjct: 541 RAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIE 595
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 196/407 (48%), Gaps = 1/407 (0%)
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R +A + ++ + + + + + C+ L R VH + SG+ + +
Sbjct: 27 RLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLEN 86
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L++ Y+K + +A +VFD + D ++V +MI F ++ + ++ M G P
Sbjct: 87 TLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKP 146
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D+ T V L++ P LL +GQ +H +++ + V + LV MYA+C ++ A +F
Sbjct: 147 DKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVGMYAKCGDISKARVIF 206
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L ++VTW+ LI GY+QQG AL + + + AS+L A +
Sbjct: 207 DRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALE 266
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H Y+IQ G+ + V ++L+ MY KCG L ++F + R+++T+ +++ G
Sbjct: 267 HGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYA 326
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
GF +A FR + ++G+ PD+ TF+++L +C + +G+ I ++ G
Sbjct: 327 QLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHA-GYNLDV 385
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
+V + G++++A + + A + + CC +G
Sbjct: 386 YLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGR 432
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 10/305 (3%)
Query: 171 VLCNSM-ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
L NS +S G ++L + + M+ G GL+ L G+ +H
Sbjct: 12 TLANSRDVSVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHA 71
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
LKS Y+ + L+SMYA+C + A VF+S+ ++V+W+A+I + +
Sbjct: 72 AILKSGIQPNRYLENTLLSMYAKCGSLTDARRVFDSIRDRNIVSWTAMIEAFVAGNKNLE 131
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
A + + + G K D V S+L A + G +H +++ G EL V ++LV
Sbjct: 132 AFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAGLELEPRVGTSLVG 191
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MY+KCG + +F+ + E+N++T+ +I G G A E + + + P++ T
Sbjct: 192 MYAKCGDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKIT 251
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL----GLAGNLEEAYSF 465
F+++L C + G+++ Y IQ+ +++V L G LEEA
Sbjct: 252 FASILQGCTTPAALEHGKKV-----HRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKL 306
Query: 466 IWSLP 470
LP
Sbjct: 307 FSDLP 311
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 148/324 (45%), Gaps = 23/324 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + +L K++H + ++ R+ + L+ +Y L AR LF P R
Sbjct: 255 ILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKCGGLEEARKLFSDLPHRD 314
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +++ YA ++A +LF+ + + +KPD T+ + +CS + L + +H
Sbjct: 315 VVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQ 374
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG-FAHCGFWD 187
+ +G D SALV+ Y+K +D+A VF+ +S+ ++V ++I+G A G
Sbjct: 375 QLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCR 434
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH------GFCLKSSFDSYDY 241
++L+ FD M + G PD+ T ++S L+ G+ H + +K + Y
Sbjct: 435 EALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRK-HFRSMYLDYGIKPMVEHY-- 491
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
S V + R + A +V S+ F P W AL++ D + +
Sbjct: 492 --SCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERG----ERAAEN 545
Query: 301 GKKADP------VLIASVLAAAAK 318
K DP V ++S+ AAA +
Sbjct: 546 VLKLDPDDDGAYVALSSIYAAAGR 569
>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
Length = 738
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 191/562 (33%), Positives = 307/562 (54%), Gaps = 35/562 (6%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQRSVFLWNSIIRAYA 80
K+LHA + + L DP ATKL AL++ L A +FD+ P+ +++ WN++IRA+A
Sbjct: 47 KQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAFA 106
Query: 81 LAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ + +F +L +Q P+++T+ + +A +E S L + +HG + + G D
Sbjct: 107 SSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDL 166
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
S++L+ YS L +D A VF + + D+V NSMISGF G +++LQLF M
Sbjct: 167 FISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKME 226
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
P+ T+VG++S + L G+ + ++ D +S+ ++ MY +C + A
Sbjct: 227 NARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLEDA 286
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDY----------------------------GK-- 289
+F+ + D+V+W+ +I GY++ GDY GK
Sbjct: 287 RRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPK 346
Query: 290 -ALYYFRKLNM-QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
AL FR+L + + K + V +AS LAA A+ + G IH Y+ + G +L+ ++++L
Sbjct: 347 EALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSL 406
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+DMYSKCG+L ++VF ++ R++ ++++I GL +HG A + F + E + P+
Sbjct: 407 IDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAMHGHGRAAIDLFSKMQETKVKPNA 466
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
TF+ LLCAC H GLV++GR F +M YG+ ++HY MV +LG AG LEEA I
Sbjct: 467 VTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSKHYACMVDILGRAGCLEEAVELIE 526
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
+P +V GALL C IYGN +LAE+ +L E D V+LSN YA+ G+WD
Sbjct: 527 KMPIVPSASVWGALLGACRIYGNVELAEMACSRLLETDSNNHGAYVLLSNIYAKAGKWDC 586
Query: 528 VMKLRDDIVDNGLRKEAGVSWV 549
V +LR + +GL KE G S +
Sbjct: 587 VSRLRQHMKVSGLEKEPGCSSI 608
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 196/384 (51%), Gaps = 36/384 (9%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTA--YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
L+ +H + +GL D +++ L TA S S +D A KVFD + P+L N++I F
Sbjct: 46 LKQLHAHMLRTGLFFDPPSATKLFTACALSSPSSLDYACKVFDQIPRPNLYTWNTLIRAF 105
Query: 181 AHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
A + L +F ML + P+ YT +I E S L GQ IHG +K+SF S
Sbjct: 106 ASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSD 165
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
++S+ L+ Y+ ++SAY VF+ + D+V+W+++I+G+ Q G +AL F+++ M
Sbjct: 166 LFISNSLIHFYSSLGDLDSAYLVFSKIVEKDIVSWNSMISGFVQGGSPEEALQLFKRMKM 225
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+ + + V + VL+A AK ++ G Y+ ++G ++++++S+A++DMY KCG L
Sbjct: 226 ENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGIDINLILSNAMLDMYVKCGSLED 285
Query: 360 GIQVFETMSERNIITYNSVILGLG-------------------------------LHGFT 388
++F+ M E++I+++ ++I G +G
Sbjct: 286 ARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKP 345
Query: 389 YQAFEFFRDI-IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
+A FR++ + K P+E T ++ L AC G ++ G I + ++ GI+
Sbjct: 346 KEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQ-GIKLNFHITT 404
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPK 471
++ + G+LE+A +S+ +
Sbjct: 405 SLIDMYSKCGHLEKALEVFYSVER 428
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 175/393 (44%), Gaps = 33/393 (8%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
V++ + SL + +H +V KAS D F + L+ Y+ L SA ++F K ++
Sbjct: 136 FVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNSLIHFYSSLGDLDSAYLVFSKIVEK 195
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WNS+I + +A LFK + +P+ T + AC++ DL R+
Sbjct: 196 DIVSWNSMISGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWAC 255
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+G+ + I S+A++ Y K +++A ++FD + + D+V +MI G+A G +D
Sbjct: 256 DYIERNGIDINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYD 315
Query: 188 KSLQLFDWM------------------------------LRLGKT--PDEYTLVGLISGL 215
+ ++FD M L+L K P+E TL ++
Sbjct: 316 AARRVFDVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAAC 375
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ + +G IH + K ++++ L+ MY++C + A VF S+ D+ WS
Sbjct: 376 AQLGAMDLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWS 435
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ- 334
A+I G + G A+ F K+ K + V ++L A + S V G + +
Sbjct: 436 AMIAGLAMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPV 495
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+G + +VD+ + G L +++ E M
Sbjct: 496 YGVVPGSKHYACMVDILGRAGCLEEAVELIEKM 528
>gi|297740651|emb|CBI30833.3| unnamed protein product [Vitis vinifera]
Length = 709
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 175/548 (31%), Positives = 296/548 (54%), Gaps = 10/548 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF-DKTPQRS 68
L+ S H++LS+ KE+H+ + L P T L+ +Y+ N + A +F D T + +
Sbjct: 44 LQASAHHKNLSKGKEIHSYMLINGFLNSPLSITSLINMYSKCNQMNFALSIFSDPTHEIN 103
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
VF +N+II + + ++ + + PD FT+ C +AC D+ ++ +HG
Sbjct: 104 VFAFNAIISGFITNGFPEEGFEFYQKMRNEGVIPDKFTFPCAIKACL---DVLEIKKIHG 160
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
GL D SALV Y K L++ A F+ + D+VL N+M++G+A G ++
Sbjct: 161 LLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQIGQFEM 220
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+ F M P +T+ G++S L+ G+ IHGF +K +DS VS+ L+
Sbjct: 221 VLETFRRMNDESVVPSRFTVTGVLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVSNSLID 280
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C C+ A +F + D+ +W+++++ + Q GD+ L ++ G + D V
Sbjct: 281 MYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQPDLVT 340
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELS------VMVSSALVDMYSKCGYLGLGIQ 362
+ +VL A + A + G IHGY+I G V++ +A++DMY+KCG +
Sbjct: 341 VTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSMRDAHL 400
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VFE MS +++ ++N +I+G G+HG+ +A E F + E L PDE TF +L AC H G
Sbjct: 401 VFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSACSHAGF 460
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V+ GR +M +Y + EHY ++ +LG AG L+EAY ++P +P V ALL
Sbjct: 461 VSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANPVVWRALL 520
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
+ C ++ ++ LAE+ A ++FE +P V++SN Y GR+++V+++R + +RK
Sbjct: 521 AACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTMRQQNVRK 580
Query: 543 EAGVSWVS 550
G SW+
Sbjct: 581 TPGCSWIE 588
>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 325 bits (832), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 187/560 (33%), Positives = 298/560 (53%), Gaps = 17/560 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L+ + +HA +A L + AT L +YA AR +FD+ P R
Sbjct: 231 LLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRMPARD 290
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL----KPDNFTYACITRACSENSDLPGLR 124
WN+++ YA R A++ ++R Q +PD T + AC++ L R
Sbjct: 291 RVAWNALVAGYA---RNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGACR 347
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH A+ G S+A++ Y K +D A KVFDG+ D + V N+MI G+A G
Sbjct: 348 EVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAENG 407
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++L LF M+ G + +++ + E L G+ +H ++ +S V +
Sbjct: 408 DATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVMN 467
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L++MY +C + A VF+ L + V+W+A+I G +Q G A+ F ++ ++ K
Sbjct: 468 ALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVKP 527
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + S++ A A ++ IHGY I+ + V V +AL+DMY+KCG + + +F
Sbjct: 528 DSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVSIARSLF 587
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ +R++IT+N++I G G HG A E F ++ G P+E+TF ++L AC H GLV+
Sbjct: 588 NSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTFLSVLSACSHAGLVD 647
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+G+E F+ M E+YG++ EHY MV LLG AG L EA+SFI +P +V GA+L
Sbjct: 648 EGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMPMEPGISVYGAMLGA 707
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C ++ N +LAE A ++FE +P +G Y V+L+N YA W DV ++R + GL+K
Sbjct: 708 CKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVARVRTAMEKKGLQKTP 767
Query: 545 GVSWV----------SGSSN 554
G S V SGS+N
Sbjct: 768 GWSIVQLKNEIHTFYSGSTN 787
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 176/349 (50%), Gaps = 6/349 (1%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
T+ + + C+ +DL R VH GL +++ ++AL Y+K +A +VFD +
Sbjct: 227 TFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDARRVFDRM 286
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVG 224
D V N++++G+A G + ++ + M G+ PD TLV ++ + L
Sbjct: 287 PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACADAQALGAC 346
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +H F ++ FD VS+ ++ +Y +C ++SA VF+ + + V+W+A+I GY++
Sbjct: 347 REVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQDRNSVSWNAMIKGYAEN 406
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
GD +AL F+++ +G V + + L A + + G +H +++ G E +V V
Sbjct: 407 GDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLVRIGLESNVNVM 466
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+AL+ MY KC L QVF+ + + +++N++ILG +G + A F + + +
Sbjct: 467 NALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDAVRLFSRMQLENVK 526
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
PD T +++ A L + + R Y I+ + +Y++ L
Sbjct: 527 PDSFTLVSIIPA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTAL 570
>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 959
Score = 323 bits (829), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 177/526 (33%), Positives = 284/526 (53%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH LV ++ DP A ++ +Y+ L AR +FD PQ WN +I Y
Sbjct: 299 QLHGLVIRSGFESDPTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNG 358
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
++A +LFK ++ + +K D+ T+A + ++ L + VH + G+ D S
Sbjct: 359 FTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKS 418
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
ALV Y K ++ A K F + D+ +C +MISG+ G ++L LF W+++ G P
Sbjct: 419 ALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVP 478
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+ T+ ++ + L +G+ +H LK ++ V S + MYA+ ++ AY F
Sbjct: 479 NCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFF 538
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ D V W+ +I +SQ G A+ FR++ G K D V +++ L+A A ++
Sbjct: 539 RRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALY 598
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H +V+++ F V+S L+DMYSKCG L L VF+ M +N +++NS+I G
Sbjct: 599 YGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYG 658
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG + + F +++E G+ PD TF ++ AC H GLV++G F MTEEYGI A+
Sbjct: 659 NHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARM 718
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EH+ MV L G AG L EA+ I S+P D G+LL C ++GN +LA++ + L E
Sbjct: 719 EHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVE 778
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP Y V+LSN +A G W+ V+K+R + + G++K G SW+
Sbjct: 779 LDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWI 824
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 223/451 (49%), Gaps = 1/451 (0%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
+ +++HA V + ++++ +Y L LF + WN +IR +
Sbjct: 93 QQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLFCRLQLCYSLPWNWLIRGF 152
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
++ F+ A F +L + + PD +T+ + +AC +++P + VH A G D
Sbjct: 153 SMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDL 212
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
S+L+ Y+ I +A +FD + D +L N M++G+ G ++ +L F M
Sbjct: 213 FIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNS 272
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
P+ + V L+S ++ G +HG ++S F+S V++ +++MY++C + A
Sbjct: 273 CVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFDA 332
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F+ + D VTW+ LI GY Q G +A+ F+ + G K D + AS L + KS
Sbjct: 333 RKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKS 392
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++ +H Y+++HG V + SALVD+Y K G + + + F+ + ++ ++I
Sbjct: 393 GSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMI 452
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G L+G +A FR +I++G+ P+ T +++L AC + G+E+ + ++ G+
Sbjct: 453 SGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKK-GL 511
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+ + + + +G L+ AY F +P
Sbjct: 512 ENVCQVGSSITYMYAKSGRLDLAYQFFRRMP 542
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 193/407 (47%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H L D F + L++LY N + A+ LFD+ P R LWN ++ Y
Sbjct: 197 KMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKN 256
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
FN A F+ + + +KP++ ++ C+ C+ + +HG I SG D +
Sbjct: 257 GDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVA 316
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ ++T YSK + +A K+FD + D V N +I+G+ GF D+++ LF M+ G
Sbjct: 317 NTIITMYSKCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVK 376
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D T + + + L + +H + ++ Y+ S LV +Y + + A
Sbjct: 377 LDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKT 436
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F D+ +A+I+GY G +AL FR L +G + + +ASVL A A A++
Sbjct: 437 FQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASL 496
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H +++ G E V S++ MY+K G L L Q F M ++ + +N +I+
Sbjct: 497 KLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSF 556
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G A + FR + G D + SA L AC + + G+E+
Sbjct: 557 SQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKEL 603
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 179/399 (44%), Gaps = 4/399 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL KE+H+ + + + D + + LV +Y + A F + V + ++I
Sbjct: 394 SLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMIS 453
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y L +A +LF+ L++ + P+ T A + AC+ + L + +H + GL
Sbjct: 454 GYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLEN 513
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S++ Y+K +D A + F + D V N MI F+ G + ++ LF M
Sbjct: 514 VCQVGSSITYMYAKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMG 573
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G D +L +S L G+ +H F +++SF S +V+S L+ MY++C +
Sbjct: 574 TSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLA 633
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+ + + V+W+++I Y G + L F ++ G + D V +++A
Sbjct: 634 LARSVFDMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACG 693
Query: 318 KSANVWPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITY 375
+ V G ++G + + +VD+Y + G L ++M + T+
Sbjct: 694 HAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTW 753
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
S++ LHG A + ++E L+P+ S + LL
Sbjct: 754 GSLLGACRLHGNVELAKLASKHLVE--LDPNNSGYYVLL 790
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 124/282 (43%), Gaps = 6/282 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + SL KELH + K L + + +YA + L A F + P +
Sbjct: 486 VLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVKD 545
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +I +++ + A LF+ + + K D+ + + AC+ L + +H
Sbjct: 546 SVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHC 605
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + D+ +S L+ YSK + A VFD + + V NS+I+ + + G +
Sbjct: 606 FVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPRE 665
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSFDSYDYVS--SV 245
L LF M+ G PD T + ++S L V +GI+ F C+ + + +
Sbjct: 666 CLDLFHEMVEAGIQPDHVTFLVIMSACGHAGL--VDEGIYYFRCMTEEYGICARMEHFAC 723
Query: 246 LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
+V +Y R ++ A+ S+ F PD TW +L+ G+
Sbjct: 724 MVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGN 765
>gi|356558562|ref|XP_003547574.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 846
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 289/541 (53%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + + ++H LV + DP A LV +Y+ L AR LF+ PQ
Sbjct: 252 ILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTD 311
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +I Y ++A LF ++ +KPD+ T+A + E+ L + VH
Sbjct: 312 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 371
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + D SAL+ Y K ++ A K+F + D+ +C +MISG+ G
Sbjct: 372 YIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAMISGYVLHGLNID 431
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ F W+++ G P+ T+ ++ + L +G+ +H LK ++ V S +
Sbjct: 432 AINTFRWLIQEGMVPNSLTMASVLPACAALAALKLGKELHCDILKKQLENIVNVGSAITD 491
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ AY F + D + W+++I+ +SQ G A+ FR++ M G K D V
Sbjct: 492 MYAKCGRLDLAYEFFRRMSETDSICWNSMISSFSQNGKPEMAVDLFRQMGMSGAKFDSVS 551
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
++S L++AA ++ G +HGYVI++ F V+SAL+DMYSKCG L L VF M+
Sbjct: 552 LSSALSSAANLPALYYGKEMHGYVIRNAFSSDTFVASALIDMYSKCGKLALARCVFNLMA 611
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+N +++NS+I G HG + + F +++ G++PD TF ++ AC H GLV +G
Sbjct: 612 GKNEVSWNSIIAAYGNHGCARECLDLFHEMLRAGVHPDHVTFLVIISACGHAGLVGEGIH 671
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F MT EYGI A+ EHY MV L G AG L EA+ I S+P D V G LL C ++
Sbjct: 672 YFHCMTREYGIGARMEHYACMVDLYGRAGRLHEAFDAIKSMPFTPDAGVWGTLLGACRLH 731
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +LA++ + L E DP+ Y V+LSN +A+ G W V+K+R + + G++K G SW
Sbjct: 732 GNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWGSVLKVRRLMKEKGVQKIPGYSW 791
Query: 549 V 549
+
Sbjct: 792 I 792
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 189/395 (47%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ + +++H + + +++++ LY L + LF + WN +IR
Sbjct: 60 VQQARQVHTQIIVGGMSDVCALSSRVLGLYVLCGRISDGGNLFFGLELCNALPWNWMIRG 119
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ F+ A + +L + + PD +T+ + +AC +++P VH A G D
Sbjct: 120 LYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHNTARSLGFHVD 179
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
SAL+ Y+ I +A +VFD + D +L N M+ G+ G ++ ++ F M
Sbjct: 180 LFVGSALIKLYADNGYICDARRVFDELPQRDTILWNVMLHGYVKSGDFNNAMGTFCGMRT 239
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+ T ++S +G +HG + S F+ V++ LV+MY++C +
Sbjct: 240 SYSMVNSVTYTCILSICATRGKFCLGTQVHGLVIGSGFEFDPQVANTLVAMYSKCGNLFD 299
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +FN++ D VTW+ LI GY Q G +A F + G K D V AS L + +
Sbjct: 300 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 359
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S ++ +H Y+++H V + SAL+D+Y K G + + ++F+ + ++ ++
Sbjct: 360 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDIYFKGGDVEMARKIFQQNTLVDVAVCTAM 419
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
I G LHG A FR +I++G+ P+ T +++
Sbjct: 420 ISGYVLHGLNIDAINTFRWLIQEGMVPNSLTMASV 454
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 183/400 (45%), Gaps = 17/400 (4%)
Query: 88 AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVT 147
+K ++ L TQL+ + RACS+ S + R VH IV G+ SS ++
Sbjct: 35 SKPETQDYLTTQLES-------LFRACSDASVVQQARQVHTQIIVGGMSDVCALSSRVLG 87
Query: 148 AYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT 207
Y I + +F G+ + + N MI G G++D +L + ML +PD+YT
Sbjct: 88 LYVLCGRISDGGNLFFGLELCNALPWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYT 147
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
+I + + + +H F +V S L+ +YA + A VF+ L
Sbjct: 148 FPYVIKACGGLNNVPLCMVVHNTARSLGFHVDLFVGSALIKLYADNGYICDARRVFDELP 207
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
D + W+ ++ GY + GD+ A+ F + + V +L+ A G
Sbjct: 208 QRDTILWNVMLHGYVKSGDFNNAMGTFCGMRTSYSMVNSVTYTCILSICATRGKFCLGTQ 267
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+HG VI GFE V++ LV MYSKCG L ++F TM + + +T+N +I G +GF
Sbjct: 268 VHGLVIGSGFEFDPQVANTLVAMYSKCGNLFDARKLFNTMPQTDTVTWNGLIAGYVQNGF 327
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
T +A F +I G+ PD TF++ L + G + +E+ Y ++ + +
Sbjct: 328 TDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEV-----HSYIVRHRVPFDV 382
Query: 448 Y----MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
Y ++ + G++E A I+ VD AV A++S
Sbjct: 383 YLKSALIDIYFKGGDVEMARK-IFQQNTLVDVAVCTAMIS 421
>gi|297804022|ref|XP_002869895.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315731|gb|EFH46154.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 853
Score = 322 bits (824), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 176/542 (32%), Positives = 293/542 (54%), Gaps = 1/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S + +LH LV + L + L+ +Y+ A LF +
Sbjct: 241 VLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNSLLSMYSKCGRFDDAIKLFRMMSRAD 300
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +I Y + ++ F ++ + + PD T++ + + S+ +L R +H
Sbjct: 301 TVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCRQIHC 360
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + D +SAL+ AY K + A K+F + D+V+ +MISG+ H G
Sbjct: 361 YIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFSQCNSVDVVVFTAMISGYLHNGLNID 420
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L++F W++++ +P+E TLV ++ + L +G+ +HGF +K FD+ + ++
Sbjct: 421 ALEMFRWLVKVKISPNEITLVSILPVIGGLLALKLGRELHGFIIKKGFDNRCNIGCAVID 480
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C MN AY +F L D+V+W+++IT +Q + A+ FR++ + G D V
Sbjct: 481 MYAKCGRMNLAYEIFGRLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICFDCVS 540
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I++ L+A A + G IHG++I+H L V S L+DMY+KCG L + VF+TM
Sbjct: 541 ISAALSACANLPSESFGKAIHGFMIKHSLALDVYSESTLIDMYAKCGNLKAAMNVFDTMK 600
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK-GLNPDESTFSALLCACCHGGLVNDGR 427
E+NI+++NS+I G HG + F +++EK G PD+ TF ++ CCH G V++G
Sbjct: 601 EKNIVSWNSIIAAYGNHGKLKDSLCLFHEMVEKSGNRPDQITFLEIISLCCHVGDVDEGV 660
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F MT++YGIQ + EHY +V L G AG L EAY + S+P P D V G LL +
Sbjct: 661 RFFRSMTQDYGIQPQQEHYACVVDLFGRAGRLSEAYETVKSMPFPPDAGVWGTLLGASRL 720
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ N +LA++ + +L + DP Y V++SN +A G W+ V K+R + + ++K G S
Sbjct: 721 HKNVELAKVASSRLMDLDPWNSGYYVLISNAHANTGEWESVTKVRSLMKEREVQKIPGYS 780
Query: 548 WV 549
W+
Sbjct: 781 WI 782
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 230/468 (49%), Gaps = 7/468 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+L+ + L + K++HA V + D + +++ +YA+ + +F + R
Sbjct: 36 LLLQDCSNLTLLRQGKQVHAFVIVNRISGDSYTDERILGMYAMCGSFSNCGKMFYRLDSR 95
Query: 68 --SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
S+ WNSII ++ N A + + +L + PD T+ C+ +AC + G+ F
Sbjct: 96 LSSIRPWNSIISSFVRMGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIEF 155
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+ G+ + +S+L+ AY + ID A K+FD V D V+ N M++G+A CG
Sbjct: 156 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVAGKLFDRVLQKDCVIWNVMLNGYAKCGA 215
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D ++ F M +P+ T ++S L+ +G +HG + S D + +
Sbjct: 216 SDSVIKGFSLMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGLDFEGSIKNS 275
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+SMY++C + A +F + D VTW+ +I+GY Q G ++L +F ++ G D
Sbjct: 276 LLSMYSKCGRFDDAIKLFRMMSRADTVTWNCMISGYVQSGLMEESLIFFYEMISSGVLPD 335
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ +S+L + +K N+ IH Y+++H L + ++SAL+D Y KC + + ++F
Sbjct: 336 AITFSSLLPSVSKFENLEYCRQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQKIFS 395
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL--V 423
+ +++ + ++I G +G A E FR +++ ++P+E T ++L GGL +
Sbjct: 396 QCNSVDVVVFTAMISGYLHNGLNIDALEMFRWLVKVKISPNEITLVSILPVI--GGLLAL 453
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
GRE+ + ++ G + ++ + G + AY L K
Sbjct: 454 KLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFGRLSK 500
>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 868
Score = 321 bits (823), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 305/578 (52%), Gaps = 36/578 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ ++ L + +++H +V + D AT L+ +Y+ + A +F K +R+
Sbjct: 163 ILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERN 222
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +II+A A + N+A L++ +L+ + P+ T+ + +C+ L R +H
Sbjct: 223 VVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHS 282
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
GL D I ++AL+T Y K + + EA ++FD +S D++ ++MI+G+A G+ DK
Sbjct: 283 HISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDK 342
Query: 189 S-----LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH------GFCLKSS-- 235
QL + M R G P++ T + ++ L G+ IH GF L S
Sbjct: 343 ESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQ 402
Query: 236 ---FDSYDYVSSV--------------------LVSMYARCNCMNSAYHVFNSLFHPDLV 272
F+ Y S+ +SMY +C ++SA VF+ + ++V
Sbjct: 403 TAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVV 462
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W+ +I GY+Q GD K + +G + D V + ++L A A + G ++H
Sbjct: 463 SWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGALAGLERGKLVHAEA 522
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
++ G E +V+++L+ MYSKCG + VF+ MS R+ + +N+++ G G HG +A
Sbjct: 523 VKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGYGQHGDGLEAV 582
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
+ F+ ++++ ++P+E T +A++ AC GLV +GREIF M E++ + + +HY MV L
Sbjct: 583 DLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFKMTPRKQHYGCMVDL 642
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG L+EA FI S+P D +V ALL C + N LAE AH + E +P +
Sbjct: 643 LGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAAHHILELEPSYASVY 702
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ LSN YA+ GRWDD K+R + D GL+K+ G S +
Sbjct: 703 ITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIE 740
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/450 (25%), Positives = 206/450 (45%), Gaps = 36/450 (8%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + V+E + K +H + + + D + L+ Y+ + SA +F +
Sbjct: 57 NTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLGNSLINFYSKFEDVASAEQVFRR 116
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
R V W+S+I AYA + A F+ + ++P+ T+ I +AC+ S L
Sbjct: 117 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANIEPNRITFLSILKACNNYSILEKG 176
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R +H G+ D ++AL+T YSK I A +VF +++ ++V ++I A
Sbjct: 177 RKIHTIVKAMGMETDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQANAQH 236
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+++ +L++ ML+ G +P+ T V L++ P L+ G+ IH + ++ V+
Sbjct: 237 RKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDMIVA 296
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-----ALYYFRKLN 298
+ L++MY +CN + A +F+ + D+++WSA+I GY+Q G K ++
Sbjct: 297 NALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEVFQLLERMR 356
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG--- 355
+G + V S+L A + G IH + + GFEL + +A+ +MY+KCG
Sbjct: 357 REGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDRSLQTAIFNMYAKCGSIY 416
Query: 356 -----------------------YLGLG-----IQVFETMSERNIITYNSVILGLGLHGF 387
Y+ G +VF M RN++++N +I G +G
Sbjct: 417 EAEQVFSKMANKNVVAWTSFLSMYIKCGDLSSAEKVFSEMPTRNVVSWNLMIAGYAQNGD 476
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ FE + +G PD T +L AC
Sbjct: 477 IVKVFELLSSMKAEGFQPDRVTVITILEAC 506
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 176/359 (49%), Gaps = 5/359 (1%)
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
A R +A L + + L ++ TY C+ C++ + VH G+ D
Sbjct: 34 AGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYL 93
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L+ YSK + A +VF ++ D+V +SMI+ +A K+ F+ M
Sbjct: 94 GNSLINFYSKFEDVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANI 153
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ T + ++ S+L G+ IH ++ V++ L++MY++C ++ A
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYSKCGEISVACE 213
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+ + ++V+W+A+I +Q +A + ++ G + V S+L +
Sbjct: 214 VFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTPEA 273
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IH ++ + G E ++V++AL+ MY KC + ++F+ MS+R++I+++++I G
Sbjct: 274 LNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAG 333
Query: 382 LGLHGFT-----YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
G+ + F+ + +G+ P++ TF ++L AC G + GR+I +++
Sbjct: 334 YAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSK 392
>gi|356532944|ref|XP_003535029.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21300-like [Glycine max]
Length = 813
Score = 321 bits (822), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 286/541 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + + + +LH LV + DP A LV +Y+ L AR LF+ PQ
Sbjct: 219 ILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLYARKLFNTMPQTD 278
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +I Y ++A LF ++ +KPD+ T+A + E+ L + VH
Sbjct: 279 TVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILESGSLRHCKEVHS 338
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + D SAL+ Y K ++ A K+F D+ +C +MISG+ G
Sbjct: 339 YIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAMISGYVLHGLNID 398
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ F W+++ G + T+ ++ + L G+ +H LK ++ V S +
Sbjct: 399 AINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKRLENIVNVGSAITD 458
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ AY F + D V W+++I+ +SQ G A+ FR++ M G K D V
Sbjct: 459 MYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFRQMGMSGAKFDSVS 518
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
++S L+AAA ++ G +HGYVI++ F V+S L+DMYSKCG L L VF M
Sbjct: 519 LSSALSAAANLPALYYGKEMHGYVIRNAFSSDTFVASTLIDMYSKCGNLALAWCVFNLMD 578
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+N +++NS+I G HG + + + +++ G++PD TF ++ AC H GLV++G
Sbjct: 579 GKNEVSWNSIIAAYGNHGCPRECLDLYHEMLRAGIHPDHVTFLVIISACGHAGLVDEGIH 638
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F MT EYGI A+ EHY MV L G AG + EA+ I S+P D V G LL C ++
Sbjct: 639 YFHCMTREYGIGARMEHYACMVDLYGRAGRVHEAFDTIKSMPFTPDAGVWGTLLGACRLH 698
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +LA++ + L E DP+ Y V+LSN +A+ G W V+K+R + + G++K G SW
Sbjct: 699 GNVELAKLASRHLLELDPKNSGYYVLLSNVHADAGEWASVLKVRSLMKEKGVQKIPGYSW 758
Query: 549 V 549
+
Sbjct: 759 I 759
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/370 (30%), Positives = 181/370 (48%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F + L++LYA N + AR +FD+ P R LWN ++R Y + F++A F +
Sbjct: 146 DLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMR 205
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ ++ TY CI C+ + +HG I SG D ++ LV YSK +
Sbjct: 206 TSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLL 265
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A K+F+ + D V N +I+G+ GF D++ LF+ M+ G PD T + +
Sbjct: 266 YARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSIL 325
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
E L + +H + ++ Y+ S L+ +Y + + A +F D+ +A
Sbjct: 326 ESGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTA 385
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+GY G A+ FR L +G + + +ASVL A A A + PG +H ++++
Sbjct: 386 MISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHILKKR 445
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
E V V SA+ DMY+KCG L L + F MS+R+ + +NS+I +G A + FR
Sbjct: 446 LENIVNVGSAITDMYAKCGRLDLAYEFFRRMSDRDSVCWNSMISSFSQNGKPEIAIDLFR 505
Query: 397 DIIEKGLNPD 406
+ G D
Sbjct: 506 QMGMSGAKFD 515
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 210/451 (46%), Gaps = 9/451 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ + +++H V + +++++ LY L A LF + R WN +IR
Sbjct: 27 VQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYALPWNWMIRG 86
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ F+ A + +L + + PD +T+ + +AC +++P VH A G D
Sbjct: 87 LYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTARSLGFHVD 146
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
SAL+ Y+ I +A +VFD + D +L N M+ G+ G +D ++ F M
Sbjct: 147 LFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAIGTFCEMRT 206
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+ T ++S G +HG + S F+ V++ LV+MY++C +
Sbjct: 207 SYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMYSKCGNLLY 266
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +FN++ D VTW+ LI GY Q G +A F + G K D V AS L + +
Sbjct: 267 ARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFASFLPSILE 326
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S ++ +H Y+++H V + SAL+D+Y K G + + ++F+ ++ ++
Sbjct: 327 SGSLRHCKEVHSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARKIFQQNILVDVAVCTAM 386
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G LHG A FR +I++G+ + T +++L AC + G+E+ +
Sbjct: 387 ISGYVLHGLNIDAINTFRWLIQEGMVTNSLTMASVLPACAAVAALKPGKELHCHI----- 441
Query: 439 IQAKTEHYI----YMVKLLGLAGNLEEAYSF 465
++ + E+ + + + G L+ AY F
Sbjct: 442 LKKRLENIVNVGSAITDMYAKCGRLDLAYEF 472
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 173/376 (46%), Gaps = 10/376 (2%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
RACS+ S + R VH IV G+G SS ++ Y +A +F + +
Sbjct: 19 RACSDASMVQQARQVHTQVIVGGMGDVCAPSSRVLGLYVLCGRFRDAGNLFFELELRYAL 78
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N MI G G++D +L + ML +PD+YT +I + + + +H
Sbjct: 79 PWNWMIRGLYMLGWFDFALLFYFKMLGSNVSPDKYTFPYVIKACGGLNNVPLCMVVHDTA 138
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
F + S L+ +YA + A VF+ L D + W+ ++ GY + GD+ A+
Sbjct: 139 RSLGFHVDLFAGSALIKLYADNGYIRDARRVFDELPLRDTILWNVMLRGYVKSGDFDNAI 198
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F ++ + V +L+ A N G +HG VI GFE V++ LV MY
Sbjct: 199 GTFCEMRTSYSMVNSVTYTCILSICATRGNFCAGTQLHGLVIGSGFEFDPQVANTLVAMY 258
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
SKCG L ++F TM + + +T+N +I G +GFT +A F +I G+ PD TF+
Sbjct: 259 SKCGNLLYARKLFNTMPQTDTVTWNGLIAGYVQNGFTDEAAPLFNAMISAGVKPDSVTFA 318
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIW 467
+ L + G + +E+ Y ++ + +Y ++ + G++E A I+
Sbjct: 319 SFLPSILESGSLRHCKEV-----HSYIVRHRVPFDVYLKSALIDVYFKGGDVEMARK-IF 372
Query: 468 SLPKPVDPAVSGALLS 483
VD AV A++S
Sbjct: 373 QQNILVDVAVCTAMIS 388
>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 320 bits (821), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 176/578 (30%), Positives = 302/578 (52%), Gaps = 36/578 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ ++ L + +E+H +V + + D AT L+ +Y+ + A +F K +R+
Sbjct: 185 ILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERN 244
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +II+A A + N+A L++ +L+ + P+ T+ + +C+ L R +H
Sbjct: 245 VVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHS 304
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
GL D + ++AL+T Y K + I +A + FD +S D++ ++MI+G+A G+ DK
Sbjct: 305 HISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDK 364
Query: 189 S-----LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
QL + M R G P++ T + ++ L G+ IH K F+S +
Sbjct: 365 ESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQ 424
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT------------------------ 279
+ + +MYA+C + A VF+ + + ++V W++L+T
Sbjct: 425 TAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVV 484
Query: 280 -------GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
GY+Q GD K + ++G + D V I S+L A + + G ++H
Sbjct: 485 SWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEA 544
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
++ G E +V+++L+ MYSKCG + VF+ +S R+ + +N+++ G G HG +A
Sbjct: 545 VKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGYGQHGIGPEAV 604
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
+ F+ ++++ + P+E TF+A++ AC GLV +GREIF M E++ ++ +HY MV L
Sbjct: 605 DLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDFRMKPGKQHYGCMVDL 664
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG L+EA FI +P D +V ALL C + N LAE AH + +P +
Sbjct: 665 LGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWAAHHILRLEPSNASVY 724
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V LSN YA+ GRWDD K+R + D GL+K+ G S +
Sbjct: 725 VTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIE 762
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 224/497 (45%), Gaps = 37/497 (7%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + ++E + K +H + + L D + L+ Y+ + S +F +
Sbjct: 79 NTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLGNSLINFYSKFGDVASVEQVFRR 138
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
R V W+S+I AYA + A F+ + ++P+ T+ I +AC+ S L
Sbjct: 139 MTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANIEPNRITFLSILKACNNYSMLEKA 198
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R +H SG+ D ++AL+T YSK I A ++F + + ++V ++I A
Sbjct: 199 REIHTVVKASGMETDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQH 258
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+++ +L++ ML+ G +P+ T V L++ P L+ G+ IH + ++ V+
Sbjct: 259 RKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEALNRGRRIHSHISERGLETDVVVA 318
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-----ALYYFRKLN 298
+ L++MY +CNC+ A F+ + D+++WSA+I GY+Q G K ++
Sbjct: 319 NALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAGYAQSGYQDKESLDEVFQLLERMR 378
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG--- 355
+G + V S+L A + + G IH + + GFE + +A+ +MY+KCG
Sbjct: 379 REGVFPNKVTFMSILKACSVHGALEQGRQIHAEISKVGFESDRSLQTAIFNMYAKCGSIY 438
Query: 356 -----------------------YLGLG-----IQVFETMSERNIITYNSVILGLGLHGF 387
Y+ G +VF MS RN++++N +I G G
Sbjct: 439 EAEQVFSKMENKNVVAWASLLTMYIKCGDLTSAEKVFSEMSTRNVVSWNLMIAGYAQSGD 498
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
+ FE + +G PD T ++L AC + G+ + + G+++ T
Sbjct: 499 IAKVFELLSSMKVEGFQPDRVTIISILEACGALSALERGKLVHAEAV-KLGLESDTVVAT 557
Query: 448 YMVKLLGLAGNLEEAYS 464
++ + G + EA +
Sbjct: 558 SLIGMYSKCGEVTEART 574
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 173/359 (48%), Gaps = 5/359 (1%)
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
A R +A L + + L ++ TY CI C++ + VH GL D
Sbjct: 56 AGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYL 115
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L+ YSK + +VF ++ D+V +SMI+ +A K+ F+ M
Sbjct: 116 GNSLINFYSKFGDVASVEQVFRRMTLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ T + ++ S+L + IH S ++ V++ L++MY++C ++ A
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYSKCGEISLACE 235
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F + ++V+W+A+I +Q +A + K+ G + V S+L +
Sbjct: 236 IFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNTPEA 295
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IH ++ + G E V+V++AL+ MY KC + + F+ MS+R++I+++++I G
Sbjct: 296 LNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRDVISWSAMIAG 355
Query: 382 LGLHGFT-----YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
G+ + F+ + +G+ P++ TF ++L AC G + GR+I +++
Sbjct: 356 YAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIHAEISK 414
>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 319 bits (818), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 281/529 (53%), Gaps = 1/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H V K+ D + V +YA NV A LFD+ P+R V WN++I Y
Sbjct: 318 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 377
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A LF+ + + KPD+ T + +C+ DL + +H + SG D S
Sbjct: 378 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 437
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K ++ A +VF+ + ++V NSMI+G++ G ++LF M G
Sbjct: 438 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 497
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TL ++ L +G+ IHG+ +++ ++ +V+S L+ +Y +C + SA +V
Sbjct: 498 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 557
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++ ++V+W+ +I+GY + G Y +AL F + G K D + SVL A ++ A +
Sbjct: 558 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 617
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH ++I+ E++ +V AL+DMY+KCG + + +F + ER+ +++ S+I
Sbjct: 618 EKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAY 677
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG ++A + F + + PD+ TF A+L AC H GLV++G F +M EYG +
Sbjct: 678 GSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA 737
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPK-PVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY ++ LLG G L EAY + P D + L S CH++ DL E + L
Sbjct: 738 VEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLL 797
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E DP + ++LSN YA +WD+V K+R I + GL+K G SW+
Sbjct: 798 IEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIE 846
Score = 231 bits (588), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 142/455 (31%), Positives = 240/455 (52%), Gaps = 11/455 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR-SVFLWNSIIRAYAL 81
K +H + L + L+ LY ++ SA+++F + LWN ++ A
Sbjct: 215 KLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACTK 274
Query: 82 AHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
F + +F LL LKPD FTY + +ACS + + VH I SG D +
Sbjct: 275 NFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVV 334
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
S+ V Y+K ++ ++AIK+FD + + D+ N++IS + G +K+L+LF+ M G
Sbjct: 335 VMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEMKVSG 394
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD TL +IS L G+ IH ++S F +VSS LV MY +C C+ A
Sbjct: 395 FKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAK 454
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + ++V+W+++I GYS +GD + FR+++ +G + ++S+L A ++S
Sbjct: 455 EVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSV 514
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
N+ G IHGY+I++ E + V+S+L+D+Y KCG +G VF+ M + N++++N +I
Sbjct: 515 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 574
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G +A F D+ + G+ PD TF+++L AC ++ G+EI + I+
Sbjct: 575 GYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI-----HNFIIE 629
Query: 441 AKTE-HYIYMVKLLGL---AGNLEEAYSFIWSLPK 471
+K E + + M LL + G ++EA LP+
Sbjct: 630 SKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE 664
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 194/394 (49%), Gaps = 5/394 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L R KE+H + ++ D F ++ LV +Y L A+ +F++ +++V WNS+I
Sbjct: 415 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 474
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+L LF+ + ++P T + I ACS + +L +F+HG I + + D
Sbjct: 475 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 534
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+S+L+ Y K I A VF + ++V N MISG+ G + ++L +F M +
Sbjct: 535 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 594
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD T ++ + ++L G+ IH F ++S + + V L+ MYA+C ++
Sbjct: 595 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDE 654
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A H+FN L D V+W+++I Y G +AL F K+ K D V ++L+A +
Sbjct: 655 ALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSH 714
Query: 319 SANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITY 375
+ V G +I ++GF+ +V S L+D+ + G L ++ + + ++
Sbjct: 715 AGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLL 774
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
+++ LH + R +IEK +PD+ +
Sbjct: 775 STLFSACHLHKKLDLGEQIGRLLIEK--DPDDPS 806
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K +H + + + D F + L+ LY + SA +F P+ +V WN +I
Sbjct: 515 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 574
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y + +A +F ++ + +KPD T+ + ACS+ + L + +H I S L
Sbjct: 575 GYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEI 634
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ + AL+ Y+K +DEA+ +F+ + + D V SMI+ + G ++L+LF+ M
Sbjct: 635 NEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQ 694
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
+ PD+ T + ++S L+ G Q I + K + + Y S L+ + R
Sbjct: 695 QSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHY----SCLIDLLGR 750
Query: 253 CNCMNSAYHVFNSLFHPDL 271
+ AY + PD+
Sbjct: 751 VGRLREAYEILQRT--PDI 767
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 2/113 (1%)
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +IH ++ G + ++ + +L+++Y C VF+T+ IT + ++
Sbjct: 214 GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAACT 273
Query: 385 HGFTY-QAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
F + + E F ++ L PD T+ ++L AC G V G+ + T + +
Sbjct: 274 KNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIK 326
>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 318 bits (816), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 174/529 (32%), Positives = 281/529 (53%), Gaps = 1/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H V K+ D + V +YA NV A LFD+ P+R V WN++I Y
Sbjct: 126 KMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQD 185
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A LF+ + + KPD+ T + +C+ DL + +H + SG D S
Sbjct: 186 GQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVS 245
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K ++ A +VF+ + ++V NSMI+G++ G ++LF M G
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIR 305
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TL ++ L +G+ IHG+ +++ ++ +V+S L+ +Y +C + SA +V
Sbjct: 306 PTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 365
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++ ++V+W+ +I+GY + G Y +AL F + G K D + SVL A ++ A +
Sbjct: 366 FQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVL 425
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH ++I+ E++ +V AL+DMY+KCG + + +F + ER+ +++ S+I
Sbjct: 426 EKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAY 485
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG ++A + F + + PD+ TF A+L AC H GLV++G F +M EYG +
Sbjct: 486 GSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPA 545
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPK-PVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY ++ LLG G L EAY + P D + L S CH++ DL E + L
Sbjct: 546 VEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLL 605
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E DP + ++LSN YA +WD+V K+R I + GL+K G SW+
Sbjct: 606 IEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIE 654
Score = 231 bits (590), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 143/459 (31%), Positives = 242/459 (52%), Gaps = 11/459 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR-SVFLWNSIIR 77
L + K +H + L + L+ LY ++ SA+++F + LWN ++
Sbjct: 19 LKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMA 78
Query: 78 AYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A F + +F LL LKPD FTY + +ACS + + VH I SG
Sbjct: 79 ACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFA 138
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D + S+ V Y+K ++ ++AIK+FD + + D+ N++IS + G +K+L+LF+ M
Sbjct: 139 MDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 198
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G PD TL +IS L G+ IH ++S F +VSS LV MY +C C+
Sbjct: 199 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCL 258
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF + ++V+W+++I GYS +GD + FR+++ +G + ++S+L A
Sbjct: 259 EMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMAC 318
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
++S N+ G IHGY+I++ E + V+S+L+D+Y KCG +G VF+ M + N++++N
Sbjct: 319 SRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWN 378
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+I G G +A F D+ + G+ PD TF+++L AC ++ G+EI
Sbjct: 379 VMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEI-----HN 433
Query: 437 YGIQAKTE-HYIYMVKLLGL---AGNLEEAYSFIWSLPK 471
+ I++K E + + M LL + G ++EA LP+
Sbjct: 434 FIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPE 472
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 196/399 (49%), Gaps = 5/399 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L R KE+H + ++ D F ++ LV +Y L A+ +F++ +++V WNS+I
Sbjct: 223 LERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAG 282
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+L LF+ + ++P T + I ACS + +L +F+HG I + + D
Sbjct: 283 YSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEAD 342
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+S+L+ Y K I A VF + ++V N MISG+ G + ++L +F M +
Sbjct: 343 IFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRK 402
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD T ++ + ++L G+ IH F ++S + + V L+ MYA+C ++
Sbjct: 403 AGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDE 462
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A H+FN L D V+W+++I Y G +AL F K+ K D V ++L+A +
Sbjct: 463 ALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSH 522
Query: 319 SANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITY 375
+ V G +I ++GF+ +V S L+D+ + G L ++ + + ++
Sbjct: 523 AGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLL 582
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+++ LH + R +IEK +PD+ + +L
Sbjct: 583 STLFSACHLHKKLDLGEQIGRLLIEK--DPDDPSTYIIL 619
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 182/368 (49%), Gaps = 11/368 (2%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP- 168
+ + C ++ L + +H + GL + +L+ Y L A VF + +P
Sbjct: 9 LLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPL 68
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGI 227
D+ L N +++ + + L++F +L PD +T ++ + G+ +
Sbjct: 69 DITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMV 128
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
H +KS F V S V MYA+CN A +F+ + D+ +W+ +I+ Y Q G
Sbjct: 129 HTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDGQP 188
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
KAL F ++ + G K D V + +V+++ A+ ++ G IH +++ GF L VSSAL
Sbjct: 189 EKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSAL 248
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
VDMY KCG L + +VFE + +N++++NS+I G L G + E FR + E+G+ P
Sbjct: 249 VDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTL 308
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAY 463
+T S++L AC + G+ I Y I+ + E I+ ++ L GN+ A
Sbjct: 309 TTLSSILMACSRSVNLQLGKFIHG-----YIIRNRVEADIFVNSSLIDLYFKCGNIGSAE 363
Query: 464 SFIWSLPK 471
+ ++PK
Sbjct: 364 NVFQNMPK 371
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 11/259 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K +H + + + D F + L+ LY + SA +F P+ +V WN +I
Sbjct: 323 NLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVSWNVMIS 382
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y + +A +F ++ + +KPD T+ + ACS+ + L + +H I S L
Sbjct: 383 GYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEI 442
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ + AL+ Y+K +DEA+ +F+ + + D V SMI+ + G ++L+LF+ M
Sbjct: 443 NEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQ 502
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
+ PD+ T + ++S L+ G Q I + K + + Y S L+ + R
Sbjct: 503 QSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHY----SCLIDLLGR 558
Query: 253 CNCMNSAYHVFNSLFHPDL 271
+ AY + PD+
Sbjct: 559 VGRLREAYEILQRT--PDI 575
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + S+L S + G +IH ++ G + ++ + +L+++Y C VF
Sbjct: 2 DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61
Query: 365 ETMSERNIITYNSVILGLGLHGFTY-QAFEFFRDIIE-KGLNPDESTFSALLCACCHGGL 422
+T+ IT + ++ F + + E F ++ L PD T+ ++L AC G
Sbjct: 62 QTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGR 121
Query: 423 VNDGREIFTRMTE 435
V G+ + T + +
Sbjct: 122 VGYGKMVHTHVIK 134
>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 843
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 290/540 (53%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L +S + L +LH L K L + A LV +YA L LF P+ +
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WN +I + A LF ++ ++ ++PD+ T + A ++ + + +HG
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ + + D SALV Y K + A V+D D+V+ ++MISG+ G ++
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+++F ++L G P+ + ++ + + +GQ +H + LK++++ YV S L+ M
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C ++ ++++F+ + D VTW+++I+ ++Q G+ +AL FR++ M+G K V I
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+SVL+A A ++ G IHG VI+ + SAL+DMY KCG L +VFE+M E
Sbjct: 554 SSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+N +++NS+I G +G ++ R + E+G D TF AL+ AC H G V +G +
Sbjct: 614 KNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRL 673
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F MTEEY I + EH+ MV L AG L++A I +P D + GALL C ++
Sbjct: 674 FRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N +LAEI + +LF+ DP Y V++SN A GRWD V K+R + D ++K G SWV
Sbjct: 734 NVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWV 793
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 212/426 (49%), Gaps = 8/426 (1%)
Query: 12 LSKSHQSLSRTKELHALVAKASL-LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV- 69
+S SH SL ++H A L D T+LV +Y L A +F P+ +
Sbjct: 50 VSPSHLSLGL--QVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAA 107
Query: 70 --FLWNSIIRAYALAHRFNDAKSLFKNLLR--TQLKPDNFTYACITRACSENSDLPGLRF 125
WN +IR +A + A + + + PD+ T+ + ++C+ + R
Sbjct: 108 CALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRL 167
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH A GL D SAL+ Y+ L+ +A +VFDG+++ D VL N M+ G+ G
Sbjct: 168 VHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGS 227
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++LF M G P+ TL +S S L G +H +K +S V++
Sbjct: 228 VSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANT 287
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LVSMYA+C C++ + +F + DLVTW+ +I+G Q G +AL F + G + D
Sbjct: 288 LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPD 347
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V + S+L A G +HGY++++ + V + SALVD+Y KC + + V++
Sbjct: 348 SVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYD 407
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ +++ +++I G L+G + +A + FR ++E+G+ P+ +++L AC +
Sbjct: 408 SSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467
Query: 426 GREIFT 431
G+E+ +
Sbjct: 468 GQELHS 473
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 131/298 (43%), Gaps = 9/298 (3%)
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNCMNSAYH 261
PD L+ ++ G PS LS+G +HG + + + D + + LV MY A
Sbjct: 38 PDR-RLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 262 VFNSLFHPD---LVTWSALITGYSQQGDYGKALYYFRKL--NMQGKKADPVLIASVLAAA 316
VF+SL + W+ LI G + GDY AL ++ K+ + D V+ +
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G ++H G + + V SAL+ MY+ G L QVF+ M+ER+ + +N
Sbjct: 157 AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWN 216
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++ G G A E F D+ G P+ +T + L + G ++ T + +
Sbjct: 217 VMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT-LAVK 275
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
YG++++ +V + L++ + +P+ D ++S C G D A
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRD-DLVTWNGMISGCVQNGFVDQA 332
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 12/277 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++ +ELH+ K + + + L+ +YA L + +F K +
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF--- 125
WNS+I ++A +A +LF+ + +K N T + + AC+ LP + +
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACAS---LPAIYYGKE 571
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG I + D SAL+ Y K ++ A +VF+ + + + V NS+I+ + G
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSFDSYDYVS- 243
+S+ L M G D T + L+S V +G+ F C+ + +
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAG--QVQEGLRLFRCMTEEYQIAPRMEH 689
Query: 244 -SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ +V +Y+R ++ A + + F PD W AL+
Sbjct: 690 FACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726
>gi|225444744|ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 597
Score = 318 bits (815), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 180/533 (33%), Positives = 294/533 (55%), Gaps = 1/533 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLV-RLYALNNVLPSARILFDKTPQRSVFLWNSII 76
SL +HALV ++ +TKL+ L + AR +FD+ P+R VFLWN++I
Sbjct: 41 SLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPTMDYARKMFDQMPKRDVFLWNTLI 100
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R YA A +A +L+ N+ L PDN+T+ + R+C+ S L + VH + G
Sbjct: 101 RGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRSCAVLSALREGKEVHCNIVKHGFD 160
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D S+LV YS+ VF + ++V ++I+G+ ++ + L +F M
Sbjct: 161 SDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSWTAVIAGYVQNRYFKEGLGVFREM 220
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+ TLV ++ L++G+ IHG+ +K D +++ L+++Y +C +
Sbjct: 221 VGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNV 280
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+A +F+ + +LV+W+A+I Y Q A+ FR++ + D + + SV++A
Sbjct: 281 ETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISAC 340
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H V + G E++V +++AL+DMY+KCG + L +VFE + R+++++
Sbjct: 341 ASLGALNTGRWMHELVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWT 400
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I HG A + F + ++G+ P+ TF+A+ AC H GLV +GR+ F M +
Sbjct: 401 SMIGACASHGHGEDALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRKHFESMMRD 460
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y I EH MV LLG AG+L EAY FI +P D +V GALL C I+ N +LAE+
Sbjct: 461 YSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALLGSCRIHSNLELAEL 520
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
VA +LF DP+ + V++SN YAE GRW+D +LR + + L+K G S V
Sbjct: 521 VAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEERELKKIPGHSLV 573
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 187/376 (49%), Gaps = 7/376 (1%)
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSAL-VTAYSKLSL 154
RT +F Y + CS LP L +H + +G G++ + S+ L +TA
Sbjct: 23 FRTNYHSRSFNY--LLNCCS---SLPDLSRIHALVVTNGCGQNLLLSTKLIITACCLAPT 77
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+D A K+FD + D+ L N++I G+A G +++L L+ M G PD YT ++
Sbjct: 78 MDYARKMFDQMPKRDVFLWNTLIRGYADAGPCEEALALYSNMHGAGLFPDNYTFPFVVRS 137
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
S L G+ +H +K FDS +V S LV+MY++ VF + ++V+W
Sbjct: 138 CAVLSALREGKEVHCNIVKHGFDSDVFVQSSLVAMYSQSGETLGMELVFGEMVVRNIVSW 197
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+A+I GY Q + + L FR++ G + + V + SVL A A + G +IHGY I+
Sbjct: 198 TAVIAGYVQNRYFKEGLGVFREMVGSGTQPNAVTLVSVLPACAGLEFLNLGKLIHGYGIK 257
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G + V +++AL+ +Y KCG + +F+ M +N++++N++I + A +
Sbjct: 258 LGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQNLVSWNAMIAAYEQNNAGANAVKL 317
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
FR + + ++ D T +++ AC G +N GR + + + G++ ++ +
Sbjct: 318 FRRMQAEKVDFDYITMVSVISACASLGALNTGRWMH-ELVKRKGLEINVSITNALIDMYA 376
Query: 455 LAGNLEEAYSFIWSLP 470
GN++ A LP
Sbjct: 377 KCGNIDLAREVFERLP 392
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 10/276 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + L+ K +H K + D L+ LY + +AR LFD ++
Sbjct: 235 VLPACAGLEFLNLGKLIHGYGIKLGVDPDVSLTNALIALYGKCGNVETARSLFDGMVVQN 294
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I AY + +A LF+ + ++ D T + AC+ L R++H
Sbjct: 295 LVSWNAMIAAYEQNNAGANAVKLFRRMQAEKVDFDYITMVSVISACASLGALNTGRWMHE 354
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
GL + ++AL+ Y+K ID A +VF+ + +V SMI A G +
Sbjct: 355 LVKRKGLEINVSITNALIDMYAKCGNIDLAREVFERLPCRSVVSWTSMIGACASHGHGED 414
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--- 245
+L+LF M G P+ +T + + L+ G+ H +S Y + V
Sbjct: 415 ALKLFSRMKDEGVKPNSFTFAAVFTACRHSGLVEEGRK-H---FESMMRDYSIMPGVEHC 470
Query: 246 --LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+V + R + AY + + PD+ W AL+
Sbjct: 471 ACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGALL 506
>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
Length = 852
Score = 317 bits (813), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 177/540 (32%), Positives = 290/540 (53%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L +S + L +LH L K L + A LV +YA L LF P+ +
Sbjct: 254 LSVSATESDLFFGVQLHTLAVKYGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDL 313
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WN +I + A LF ++ ++ ++PD+ T + A ++ + + +HG
Sbjct: 314 VTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGY 373
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ + + D SALV Y K + A V+D D+V+ ++MISG+ G ++
Sbjct: 374 IVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEA 433
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+++F ++L G P+ + ++ + + +GQ +H + LK++++ YV S L+ M
Sbjct: 434 VKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDM 493
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C ++ ++++F+ + D VTW+++I+ ++Q G+ +AL FR++ M+G K V I
Sbjct: 494 YAKCGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTI 553
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+SVL+A A ++ G IHG VI+ + SAL+DMY KCG L +VFE+M E
Sbjct: 554 SSVLSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPE 613
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+N +++NS+I G +G ++ R + E+G D TF AL+ AC H G V +G +
Sbjct: 614 KNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRL 673
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F MTEEY I + EH+ MV L AG L++A I +P D + GALL C ++
Sbjct: 674 FRCMTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHR 733
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N +LAEI + +LF+ DP Y V++SN A GRWD V K+R + D ++K G SWV
Sbjct: 734 NVELAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWV 793
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 212/426 (49%), Gaps = 8/426 (1%)
Query: 12 LSKSHQSLSRTKELHALVAKASL-LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV- 69
+S SH SL ++H A L D T+LV +Y L A +F P+ +
Sbjct: 50 VSPSHLSLGL--QVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPRGAAA 107
Query: 70 --FLWNSIIRAYALAHRFNDAKSLFKNLLR--TQLKPDNFTYACITRACSENSDLPGLRF 125
WN +IR +A + A + + + PD+ T+ + ++C+ + R
Sbjct: 108 CALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIALGRL 167
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH A GL D SAL+ Y+ L+ +A +VFDG+++ D VL N M+ G+ G
Sbjct: 168 VHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWNVMMDGYVKAGS 227
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++LF M G P+ TL +S S L G +H +K +S V++
Sbjct: 228 VSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESEVAVANT 287
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LVSMYA+C C++ + +F + DLVTW+ +I+G Q G +AL F + G + D
Sbjct: 288 LVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDMQKSGIRPD 347
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V + S+L A G +HGY++++ + V + SALVD+Y KC + + V++
Sbjct: 348 SVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAVRMAQSVYD 407
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ +++ +++I G L+G + +A + FR ++E+G+ P+ +++L AC +
Sbjct: 408 SSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKL 467
Query: 426 GREIFT 431
G+E+ +
Sbjct: 468 GQELHS 473
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 123/275 (44%), Gaps = 8/275 (2%)
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNCMNSAYH 261
PD L+ ++ G PS LS+G +HG + + + D + + LV MY A
Sbjct: 38 PDR-RLLAVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVA 96
Query: 262 VFNSLFHPD---LVTWSALITGYSQQGDYGKALYYFRKL--NMQGKKADPVLIASVLAAA 316
VF+SL + W+ LI G + GDY AL ++ K+ + D V+ +
Sbjct: 97 VFSSLPRGAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSC 156
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G ++H G + + V SAL+ MY+ G L QVF+ M+ER+ + +N
Sbjct: 157 AALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQVFDGMAERDCVLWN 216
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++ G G A E F D+ G P+ +T + L + G ++ T + +
Sbjct: 217 VMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHT-LAVK 275
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
YG++++ +V + L++ + +P+
Sbjct: 276 YGLESEVAVANTLVSMYAKCKCLDDGWKLFGLMPR 310
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 123/277 (44%), Gaps = 12/277 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++ +ELH+ K + + + L+ +YA L + +F K +
Sbjct: 455 VLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKCGRLDLSHYIFSKISAKD 514
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF--- 125
WNS+I ++A +A +LF+ + +K N T + + AC+ LP + +
Sbjct: 515 EVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSVLSACAS---LPAIYYGKE 571
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG I + D SAL+ Y K ++ A +VF+ + + + V NS+I+ + G
Sbjct: 572 IHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGL 631
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSFDSYDYVS- 243
+S+ L M G D T + L+S V +G+ F C+ + +
Sbjct: 632 VKESVSLLRHMQEEGFKADHVTFLALVSACAHAG--QVQEGLRLFRCMTEEYQIAPRMEH 689
Query: 244 -SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ +V +Y+R ++ A + + F PD W AL+
Sbjct: 690 FACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALL 726
>gi|225446273|ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera]
gi|296090299|emb|CBI40118.3| unnamed protein product [Vitis vinifera]
Length = 618
Score = 316 bits (810), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 291/545 (53%), Gaps = 7/545 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L K S +++H + ++ + F + + L NN A +LF + P +
Sbjct: 34 LLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRFIDLKDFNN----ASLLFSQIPYPN 89
Query: 69 VFLWNSIIRAYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ +N +IR +FN + + ++P+NFTY + AC+ L + H
Sbjct: 90 EYAFNIMIRGLTTTWQKFNLTIEFYYQMKDFGIRPNNFTYPFVFIACANLLVLNHGQCAH 149
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + SGL D +L+T YS+ + A +VFD +S+ DLV NSMISG++ G+
Sbjct: 150 SGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKDLVSWNSMISGYSRMGYAG 209
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++ LF M G PDE TLV ++ + L +G I GF +++ D +V S L+
Sbjct: 210 DAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALI 269
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY +C ++SA VF+ + D+VTW+A+ITGY+Q G +A+ F + G D +
Sbjct: 270 GMYGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKI 329
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ VL+A A + G + Y + G + + VS+AL+DMY+KCG L ++VFE M
Sbjct: 330 TLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFEDM 389
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVND 425
++N +++N++I L HG ++ F+ + ++G + P++ +F +L AC H GLV++
Sbjct: 390 PQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISFIGVLSACVHAGLVDE 449
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR++F M+ +G+ K EH+ MV LL AG++ EA+ FI +P+ D V GALL C
Sbjct: 450 GRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEKPDEVVLGALLGAC 509
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
N D++E V H L E +P ++ S +A RWDD ++R + G+ K G
Sbjct: 510 QKRRNVDVSERVMHMLLEMEPLNSGNYIISSKIFANMKRWDDSARMRVLMRQRGVTKTPG 569
Query: 546 VSWVS 550
SW+
Sbjct: 570 CSWIE 574
>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 305/562 (54%), Gaps = 21/562 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L+ + +HA +A + + AT L +YA AR +FD+ P R
Sbjct: 65 LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL----KPDNFTYACITRACSENSDLPGLR 124
WN+++ YA R A+ + ++R Q +PD+ T + AC+ L R
Sbjct: 125 RVAWNALVAGYA---RNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACR 181
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
H AI SGL ++A++ AY K I A VFD + + V N+MI G+A G
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++L LF+ M+ G + +++ + E L G +H ++ DS V +
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L++MY++C ++ A HVF+ L V+W+A+I G +Q G A+ F ++ ++ K
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + SV+ A A ++ IHGY I+ + V V +AL+DMY+KCG + + +F
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF 421
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ ER++IT+N++I G G HGF A E F ++ G+ P+E+TF ++L AC H GLV+
Sbjct: 422 NSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVD 481
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALL 482
+GRE FT M E+YG++ EHY MV LLG AG L+EA++FI + P+DP +S GA+L
Sbjct: 482 EGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM--PMDPGLSVYGAML 539
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C ++ N +LAE A ++FE P++G Y V+L+N YA W DV ++R + NGL+K
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 543 EAGVSWV----------SGSSN 554
G S + SGS+N
Sbjct: 600 TPGWSIIQLKNEIHTFYSGSTN 621
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 172/349 (49%), Gaps = 6/349 (1%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
T+ + + C+ DL R VH G+ +++ ++AL Y+K +A +VFD +
Sbjct: 61 TFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRM 120
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVG 224
D V N++++G+A G ++++ M G+ PD TLV ++ L+
Sbjct: 121 PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAAC 180
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ H F ++S + V++ ++ Y +C + +A VF+ + + V+W+A+I GY+Q
Sbjct: 181 REAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQN 240
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
GD +AL F ++ +G V + + L A + + G +H +++ G + +V V
Sbjct: 241 GDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVM 300
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+AL+ MYSKC + L VF+ + R +++N++ILG +G + A F + + +
Sbjct: 301 NALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVK 360
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
PD T +++ A L + + R Y I+ + +Y++ L
Sbjct: 361 PDSFTLVSVIPA-----LADISDPLQARWIHGYSIRLHLDQDVYVLTAL 404
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 118/242 (48%), Gaps = 1/242 (0%)
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L F M G P T L+ L+ G+ +H DS ++ L +
Sbjct: 43 ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALAN 102
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL-YYFRKLNMQGKKADPV 307
MYA+C A VF+ + D V W+AL+ GY++ G A+ R +G++ D +
Sbjct: 103 MYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSI 162
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ SVL A A + + H + I+ G E V V++A++D Y KCG + VF+ M
Sbjct: 163 TLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWM 222
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+N +++N++I G +G + +A F ++E+G++ + + A L AC G +++G
Sbjct: 223 PTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGM 282
Query: 428 EI 429
+
Sbjct: 283 RV 284
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Query: 286 DYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
D AL F ++ G A PVL S+L A ++ G +H + G + +
Sbjct: 39 DLPAALAAFVAMSSAG--APPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALA 96
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF-FRDIIEKG 402
++AL +MY+KC +VF+ M R+ + +N+++ G +G A E R E+G
Sbjct: 97 ATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEG 156
Query: 403 LNPDESTFSALL 414
PD T ++L
Sbjct: 157 ERPDSITLVSVL 168
>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 679
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 180/534 (33%), Positives = 294/534 (55%), Gaps = 3/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S S+ K+LHA + L A+ ++ +Y +L A ++F V W S+I
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVI 77
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R + F+ A + F + + PD+ + + ++C+ DL VHG + G+
Sbjct: 78 RCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMD 137
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D T +AL+ YSKL ID KVF+ + D+V N++I+G+A G ++ +L++ M
Sbjct: 138 CDLYTGNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREM 197
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
PD +TL ++ E + G+ IHG+ ++ DS Y+ S LV MYA+ +
Sbjct: 198 GTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARI 257
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ VF+ L+ D ++W++L+ GY Q G Y +AL FR++ + V +SV+ A
Sbjct: 258 EDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPAC 317
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A + G +HGYV++ GF ++ ++SALVDMYSKCG + ++F+ M+ + +++
Sbjct: 318 AHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWT 377
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I+G LHG ++A F ++ +G+ P++ F A+L AC H GLV++ F MT+
Sbjct: 378 AIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKV 437
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
YG+ + EHY + LLG AG LEEAY FI + +V LLS C ++ N +LAE
Sbjct: 438 YGLNQELEHYAAVADLLGRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCSVHKNLELAEK 497
Query: 497 VAHQLFENDPRK-GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
VA ++F D GAY V++ N YA +GRW ++ KLR + GLRK+ SW+
Sbjct: 498 VAEKIFTIDSENMGAY-VLMCNMYASNGRWKEMAKLRLRVRKKGLRKKPACSWI 550
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + + + KE+H V + + D + + LV +YA + + + +F +R
Sbjct: 212 VLPIFSEYVDVLKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRD 271
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNS++ Y R+N+A LF+ ++ +++P ++ + AC+ + L + +HG
Sbjct: 272 SISWNSLVAGYVQNGRYNEALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHG 331
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G GR+ +SALV YSK I A K+FD ++ D V ++I G A G +
Sbjct: 332 YVLRGGFGRNIFIASALVDMYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHE 391
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-----FCLKSSFDSYDYVS 243
++ LF+ M R G P++ V +++ L+ G + L + Y V+
Sbjct: 392 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 451
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYS 282
+L R + AY + + P WS L++ S
Sbjct: 452 DLL----GRAGKLEEAYDFISKMRVEPTGSVWSTLLSSCS 487
>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 193/562 (34%), Positives = 305/562 (54%), Gaps = 21/562 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L+ + +HA +A + + AT L +YA AR +FD+ P R
Sbjct: 65 LLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRD 124
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL----KPDNFTYACITRACSENSDLPGLR 124
WN+++ YA R A+ + ++R Q +PD+ T + AC+ L R
Sbjct: 125 RVAWNALVAGYA---RNGLARMAMEMVVRMQEEEGERPDSITLVSVLPACANARALAACR 181
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
H AI SGL ++A++ AY K I A VFD + + V N+MI G+A G
Sbjct: 182 EAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNSVSWNAMIDGYAQNG 241
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++L LF+ M+ G + +++ + E L G +H ++ DS V +
Sbjct: 242 DSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELLVRIGLDSNVSVMN 301
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L++MY++C ++ A HVF+ L V+W+A+I G +Q G A+ F ++ ++ K
Sbjct: 302 ALITMYSKCKRVDLASHVFDELDRRTQVSWNAMILGCAQNGCSEDAVRLFTRMQLENVKP 361
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + SV+ A A ++ IHGY I+ + V V +AL+DMY+KCG + + +F
Sbjct: 362 DSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDMYAKCGRVNIARILF 421
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ ER++IT+N++I G G HGF A E F ++ G+ P+E+TF ++L AC H GLV+
Sbjct: 422 NSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVPNETTFLSVLSACSHAGLVD 481
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALL 482
+GRE FT M E+YG++ EHY MV LLG AG L+EA++FI + P+DP +S GA+L
Sbjct: 482 EGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAFIQKM--PMDPGLSVYGAML 539
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C ++ N +LAE A ++FE P++G Y V+L+N YA W DV ++R + NGL+K
Sbjct: 540 GACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYANASMWKDVARVRTAMEKNGLQK 599
Query: 543 EAGVSWV----------SGSSN 554
G S + SGS+N
Sbjct: 600 TPGWSIIQLKNEIHTFYSGSTN 621
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 181/379 (47%), Gaps = 6/379 (1%)
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+RA A A + F + P T+ + + C+ DL R VH G+
Sbjct: 31 LRASAARSDLPAALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGI 90
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+++ ++AL Y+K +A +VFD + D V N++++G+A G ++++
Sbjct: 91 DSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVR 150
Query: 196 ML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G+ PD TLV ++ L+ + H F ++S + V++ ++ Y +C
Sbjct: 151 MQEEEGERPDSITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCG 210
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ +A VF+ + + V+W+A+I GY+Q GD +AL F ++ +G V + + L
Sbjct: 211 DIRAARVVFDWMPTKNSVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQ 270
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + + G +H +++ G + +V V +AL+ MYSKC + L VF+ + R ++
Sbjct: 271 ACGELGCLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVS 330
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N++ILG +G + A F + + + PD T +++ A L + + R
Sbjct: 331 WNAMILGCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPA-----LADISDPLQARWI 385
Query: 435 EEYGIQAKTEHYIYMVKLL 453
Y I+ + +Y++ L
Sbjct: 386 HGYSIRLHLDQDVYVLTAL 404
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 5/142 (3%)
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHGYVI 333
A + + + D AL F ++ G A PVL S+L A ++ G +H +
Sbjct: 29 ARLRASAARSDLPAALAAFVAMSSAG--APPVLRTFTSLLKLCAARGDLATGRAVHAQLA 86
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
G + + ++AL +MY+KC +VF+ M R+ + +N+++ G +G A E
Sbjct: 87 ARGIDSEALAATALANMYAKCRRPADARRVFDRMPVRDRVAWNALVAGYARNGLARMAME 146
Query: 394 F-FRDIIEKGLNPDESTFSALL 414
R E+G PD T ++L
Sbjct: 147 MVVRMQEEEGERPDSITLVSVL 168
>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 687
Score = 314 bits (804), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 294/541 (54%), Gaps = 4/541 (0%)
Query: 14 KSH-QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQRSVF 70
K+H S+S+TK+ HAL+ + LL +P +++KL+ AL++ L AR LF + F
Sbjct: 18 KTHCTSISKTKQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPF 77
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
+ N++IR YA + +A SL+ ++ + DN+TY + AC+ + R H
Sbjct: 78 ICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEV 137
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ +G G D +AL+ Y A VFD + D+V N MI+ + G +K+
Sbjct: 138 LKNGFGSDLFVINALIQFYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAF 197
Query: 191 QLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L D M +L PDE T+V L+ + L G+ +H + + D V++ ++ M
Sbjct: 198 DLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDM 257
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C+ + SA VFN + D+++W+++++G ++ G + +AL F+K+ + + D + +
Sbjct: 258 YCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITL 317
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
VL+A A++ + G IH + + +++ +ALVDMY+KCG + L +QVF M
Sbjct: 318 VGVLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRV 377
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN+ T+N++I GL +HG A F + L PD+ TF ALLCAC H GLV++G +
Sbjct: 378 RNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAM 437
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M ++ I+ + EHY +V LL A +++A +FI ++P + + LL C G
Sbjct: 438 FQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLLGACRSGG 497
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ DLAE + ++ E +P VMLSN YA +WD +KLR + + G+ K G SW+
Sbjct: 498 HFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVSQWDHALKLRKQMKNKGIEKTPGCSWI 557
Query: 550 S 550
Sbjct: 558 E 558
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L + K +H L+ K + D T LV +YA + A +F + R+
Sbjct: 320 VLSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRN 379
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
VF WN++I A+ DA SLF + +L PD+ T+ + ACS H
Sbjct: 380 VFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACS-----------HA 428
Query: 129 GAIVSGLG 136
G + GL
Sbjct: 429 GLVDEGLA 436
>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 711
Score = 314 bits (804), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 292/550 (53%), Gaps = 6/550 (1%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARIL 60
LH +L L K ++S+ K++HA + + L DPF A+K+V AL++ LP AR++
Sbjct: 38 IQLHPCLLSLEKC-TTMSQLKQIHAQMLRTCLFVDPFSASKIVAFCALHDSGSLPYARLV 96
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
F++ P + F NSIIR Y + A ++ ++ L PD FT+ + ++C L
Sbjct: 97 FNQIPNPTTFTCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGV---L 153
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+ +H + G D+ + L+ YS + A KVFD + + +V +MI +
Sbjct: 154 CEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSVVSWATMIGAY 213
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
A ++++LF M P+E TLV +++ L + +H + ++ +
Sbjct: 214 AQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHT 273
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
++S L+ +Y +C C A +FN + +L W+ +I G+ + DY +AL F ++ +
Sbjct: 274 VLTSALMDVYCKCGCYPLARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLS 333
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G K D V +AS+L A + G +H Y+ + E+ V + +ALVDMY+KCG +
Sbjct: 334 GVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESA 393
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++VF+ M E++++T+ ++I+GL + G +A E F ++ + PD TF +L AC H
Sbjct: 394 MRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHA 453
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLVN+G F M +YGIQ EHY MV +LG AG + EA I ++P D V
Sbjct: 454 GLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVG 513
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLS C I+GN +AE A QL E DP+ G V+LSN Y+ W+ K+R+ +V+ +
Sbjct: 514 LLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 573
Query: 541 RKEAGVSWVS 550
+K G S +
Sbjct: 574 KKPPGCSAIE 583
>gi|296081839|emb|CBI20844.3| unnamed protein product [Vitis vinifera]
Length = 700
Score = 313 bits (802), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 277/527 (52%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H K D F + V +Y +L A + FD+ + + WN++I YA
Sbjct: 166 KCVHGYAVKIGFDSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQN 225
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF + KP++ T+ C+ +A + SD R H + G D +
Sbjct: 226 CYEEEAIELFYQMELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVA 285
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV YSK I++ + F +S +LV N++I+G++ G ++++L+++ + G
Sbjct: 286 TALVDMYSKFYDIEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGME 345
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +T VGL S S ++ G +H +K DS V + +V+ Y++C +SA
Sbjct: 346 PDSFTFVGLFSSCSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEA 405
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F S+ P+ V W+ +I+G++Q G+ KAL F K+ K D +SV+ A + A V
Sbjct: 406 FESINRPNSVCWAGIISGFAQNGEGEKALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAV 465
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H +V++ G + ++ V SA++DMYSKCG + +VF M E+N++++NS+I G
Sbjct: 466 EQGRHLHAHVMKSGLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGY 525
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+GF +A F+++ G+ P TF +L AC H GLV +GR + M YGI
Sbjct: 526 AQNGFCKEALLLFQEMTSSGILPTAVTFVGILFACSHAGLVEEGRNFYNLMVHNYGIPPS 585
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EH MV LLG AG LEEA +F+ S +P + G+LLS C ++ NSD+ A
Sbjct: 586 MEHCTCMVDLLGRAGYLEEAEAFLLSSSFSKEPGIWGSLLSACGVHKNSDVGSRAAQHCL 645
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P + LSN YA W +V ++RD + D G+ KE G SW+
Sbjct: 646 FLEPHYSSSYTALSNIYASKELWSEVSRIRDLMKDMGVEKEPGCSWI 692
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 222/459 (48%), Gaps = 11/459 (2%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S LH L+ K F ++ L+ +Y+ ++ + AR LFD P+R WNS+I Y
Sbjct: 58 SLATSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGY 117
Query: 80 ALAHRFNDAKSLFKNLLRT----QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ +A LF +++ + +L +FT A + +AC + VHG A+ G
Sbjct: 118 SQRGLNEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGF 177
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D S + V Y K ++D A FD + + D+V N+MI+G+A + +++++LF
Sbjct: 178 DSDLFVSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQ 237
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M G P++ T ++ S +VG+ H LK +V++ LV MY++
Sbjct: 238 MELEGFKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYD 297
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ F + +LV+++ALITGYS G Y +AL + +L +G + D + ++
Sbjct: 298 IEDVERAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSS 357
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ S+ V GA +H + ++ G + V V +++V+ YSKCG+ ++ FE+++ N + +
Sbjct: 358 CSVSSTVAEGAQVHVHSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCW 417
Query: 376 NSVILGLGLHGFTYQAFEFF---RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+I G +G +A F R I+K DE + S+++ A V GR +
Sbjct: 418 AGIISGFAQNGEGEKALMQFCKMRKFIDK---TDEFSSSSVIKAVSSWAAVEQGRHLHAH 474
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ + G+ ++ + G +E+A +P+
Sbjct: 475 VMKS-GLDCTIYVGSAVIDMYSKCGMVEDAQKVFSVMPE 512
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/411 (27%), Positives = 200/411 (48%), Gaps = 5/411 (1%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ +V W S I A + A S F +LR ++P+ TY+ AC++++
Sbjct: 3 ETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLATS 62
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H + G SS L++ YSK I EA +FD + + D V NSMI+G++ G
Sbjct: 63 LHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQRGL 122
Query: 186 WDKSLQLFDWMLRLGKT----PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
+++ LF M+ + ++TL ++ +G+ +HG+ +K FDS +
Sbjct: 123 NEEACGLFCSMINSCENWKLLVSDFTLATVLKACGGLGCSRIGKCVHGYAVKIGFDSDLF 182
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
VS V MY +C ++ A F+ + + D+V W+ +ITGY+Q +A+ F ++ ++G
Sbjct: 183 VSGSTVYMYCKCGILDMAGLAFDQIENKDIVAWNTMITGYAQNCYEEEAIELFYQMELEG 242
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
K + VL A+ ++ G H V++ G + V V++ALVDMYSK +
Sbjct: 243 FKPNDTTFCCVLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVE 302
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ F MS+RN++++N++I G L G +A + + +G+ PD TF L +C
Sbjct: 303 RAFGEMSKRNLVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSS 362
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
V +G ++ + ++G+ + +V G + A S+ +P
Sbjct: 363 TVAEGAQVHVH-SVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRP 412
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 176/350 (50%), Gaps = 1/350 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S + + + HA V K D F AT LV +Y+ + F + +R+
Sbjct: 253 VLKASTAMSDSAVGRCFHAKVLKLGCSMDVFVATALVDMYSKFYDIEDVERAFGEMSKRN 312
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +N++I Y+L ++ +A ++ L ++PD+FT+ + +CS +S + VH
Sbjct: 313 LVSFNALITGYSLMGKYEEALRVYSQLQSEGMEPDSFTFVGLFSSCSVSSTVAEGAQVHV 372
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
++ GL D +++V YSK D A++ F+ ++ P+ V +ISGFA G +K
Sbjct: 373 HSVKFGLDSDVSVGNSIVNFYSKCGFTDSALEAFESINRPNSVCWAGIISGFAQNGEGEK 432
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L F M + DE++ +I + + + G+ +H +KS D YV S ++
Sbjct: 433 ALMQFCKMRKFIDKTDEFSSSSVIKAVSSWAAVEQGRHLHAHVMKSGLDCTIYVGSAVID 492
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C + A VF+ + ++V+W+++ITGY+Q G +AL F+++ G V
Sbjct: 493 MYSKCGMVEDAQKVFSVMPEKNVVSWNSMITGYAQNGFCKEALLLFQEMTSSGILPTAVT 552
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYL 357
+L A + + V G + ++ +G S+ + +VD+ + GYL
Sbjct: 553 FVGILFACSHAGLVEEGRNFYNLMVHNYGIPPSMEHCTCMVDLLGRAGYL 602
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 81/161 (50%), Gaps = 6/161 (3%)
Query: 266 LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG 325
+ ++V W++ IT +++G +AL F ++ G + + + ++ ++A A+S
Sbjct: 1 MLETNVVRWTSKITDNARRGLVDQALSCFLQMLRAGIEPNAITYSATISACAQSTRPSLA 60
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
+H +++ GF + VSS L+ MYSK + +F+ M ER+ +++NS+I G
Sbjct: 61 TSLHCLILKKGFSNQLFVSSGLISMYSKHDRIKEARFLFDDMPERDDVSWNSMIAGYSQR 120
Query: 386 GFTYQAFEFFRDIIEKGLN----PDESTFSALLCACCHGGL 422
G +A F +I N + T + +L AC GGL
Sbjct: 121 GLNEEACGLFCSMINSCENWKLLVSDFTLATVLKAC--GGL 159
>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 313 bits (801), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 293/543 (53%), Gaps = 4/543 (0%)
Query: 12 LSKSHQSLSRT---KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+SKS SL ++LH + K+ LV Y N+ + SAR +FD+ +R
Sbjct: 201 VSKSFSSLRSVNGGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERD 260
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNSII Y S+F +L + ++ D T + C+++ + R VH
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHC 320
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + R+ + L+ YSK +D A VF +S +V SMI+G+A G +
Sbjct: 321 FGVKACFSREDRFCNTLLDMYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGE 380
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++LF+ M G +PD YT+ +++ LL G+ +H + ++ +VS+ L+
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMD 440
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MYA+C M A VF+ + D+++W+ +I GYS+ +AL F L ++ + D
Sbjct: 441 MYAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDER 500
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A VL A A + G IHGY++++G+ V+++LVDMY+KCG L L +F+ +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDI 560
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++++++ +I G G+HGF +A F + + G+ PDE +F +LL AC H GLV++G
Sbjct: 561 TSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGW 620
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M E I+ EHY +V +L GNL +AY FI ++P P D + GALL C I
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + LAE VA ++FE +P Y V+++N YAE +W++V +LR I GLRK G S
Sbjct: 681 HHDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCS 740
Query: 548 WVS 550
W+
Sbjct: 741 WIE 743
Score = 216 bits (549), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/422 (29%), Positives = 227/422 (53%), Gaps = 1/422 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L +SL KE+ + + D +KL +Y L A +FD+
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEK 159
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN ++ A + F+ + LFK ++ + ++ D++T++C++++ S + G +HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHG 219
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SG G + ++LV Y K +D A KVFD +++ D++ NS+I+G+ G +K
Sbjct: 220 YILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L +F ML G D T+V + +G + L+S+G+ +H F +K+ F D + L+
Sbjct: 280 GLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCNTLLD 339
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C ++SA VF + +V+++++I GY+++G G+A+ F ++ +G D
Sbjct: 340 MYSKCGDLDSAKVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ +VL A++ + G +H ++ ++ + VS+AL+DMY+KCG + VF M
Sbjct: 400 VTAVLNCCARNRLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKCGSMREAELVFSEMR 459
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFR-DIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
++II++N+VI G + + +A F ++EK +PDE T + +L AC + GR
Sbjct: 460 VKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 428 EI 429
EI
Sbjct: 520 EI 521
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 111/238 (46%), Gaps = 5/238 (2%)
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D TL ++ + L G+ + F + F + S L MY C + A VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVF 152
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + + W+ L+ ++ GD+ ++ F+K+ G + D + V + + +V
Sbjct: 153 DQVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVN 212
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +HGY+++ GF V ++LV Y K + +VF+ M+ER++I++NS+I G
Sbjct: 213 GGEQLHGYILKSGFGERNSVGNSLVAFYLKNHRVDSARKVFDEMTERDVISWNSIINGYV 272
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G + F ++ G+ D +T ++ C L++ GR + +G++A
Sbjct: 273 SNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHC-----FGVKA 325
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S + + +E+H + + D A LV +YA L AR+LFD +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKD 564
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ W +I Y + +A +LF + + ++PD ++ + ACS
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACS 611
>gi|225457044|ref|XP_002279639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300
[Vitis vinifera]
Length = 807
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 179/545 (32%), Positives = 296/545 (54%), Gaps = 5/545 (0%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK-----TPQRSV 69
S QSL+ +E+H +V K+ L + + + L+ +Y + +A +F+ + +R+
Sbjct: 223 SLQSLTHGREIHGVVVKSGLDVEEYLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNA 282
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
+WN +I Y F+ A LF ++ +KPD T + CSE+ D+ + +HG
Sbjct: 283 VIWNVMISGYVSNGCFSQALLLFIKMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGL 342
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
GL + +AL+ Y K + +K+F + +L++ +++IS A G K+
Sbjct: 343 IFKFGLKNNIRVETALLDMYLKCGDMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKA 402
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L+LF D LV ++ +L G IHG K F S +V S LV +
Sbjct: 403 LELFYEFKMEDGLADSGILVAVLRACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDL 462
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C M + VF L DLV+W+ALI+GY+Q +AL FR + ++ + + V I
Sbjct: 463 YAKCRDMGYSKKVFLRLSQKDLVSWNALISGYAQDECADEALKAFRDMQLEEIRPNTVTI 522
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
A +L+ A + + +HGY+I+ G +V+VS++L+ Y+KCG + + FE M E
Sbjct: 523 ACILSVCAHLSVMTLCKEVHGYLIRQGLGSTVLVSNSLIATYAKCGDINSSLYTFEKMPE 582
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN +++NS+ILG+G+H T + F ++ G+ PD TF+A+L AC H G V++G +
Sbjct: 583 RNDVSWNSIILGMGMHSRTDEMIVLFDKMVASGIKPDHVTFTAILSACSHAGRVDEGCKY 642
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M E++ ++ + E Y MV LLG AG+L +AY I ++P D + G+LL C +G
Sbjct: 643 FKSMVEDFNLKPQLEQYTCMVDLLGRAGHLNQAYDLIMAMPCTPDDRIWGSLLGSCKNHG 702
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ LAEIVA+ +F+ P Y+V+L+N Y G+ + K+R +I D GL+K+ G SW+
Sbjct: 703 DEILAEIVANHIFKLVPSSVGYRVLLANLYENLGKGREGSKVRSEIKDMGLKKKPGCSWI 762
Query: 550 SGSSN 554
+N
Sbjct: 763 EVDNN 767
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 204/415 (49%), Gaps = 6/415 (1%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ +++H V K +L D L+ +Y V+ A +F+K P+ + WN++I +
Sbjct: 127 KGRQIHGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQ 186
Query: 81 LAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ + + F++++ + P+ +CS L R +HG + SGL +
Sbjct: 187 KSMDYTRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEE 246
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPD-----LVLCNSMISGFAHCGFWDKSLQLFD 194
S+L+ Y K I A +F+ + D D V+ N MISG+ G + ++L LF
Sbjct: 247 YLVSSLIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFI 306
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M+ G PD T+V L S E ++ G+ IHG K + V + L+ MY +C
Sbjct: 307 KMMVWGIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCG 366
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
M + +F + +L+ WSA+I+ +Q G KAL F + M+ AD ++ +VL
Sbjct: 367 DMGTGLKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGLADSGILVAVLR 426
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + G IHG + GF V V SALVD+Y+KC +G +VF +S++++++
Sbjct: 427 ACSSLTLKPEGMQIHGLATKMGFVSDVFVGSALVDLYAKCRDMGYSKKVFLRLSQKDLVS 486
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+N++I G +A + FRD+ + + P+ T + +L C H ++ +E+
Sbjct: 487 WNALISGYAQDECADEALKAFRDMQLEEIRPNTVTIACILSVCAHLSVMTLCKEV 541
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/370 (30%), Positives = 193/370 (52%), Gaps = 9/370 (2%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTY-ACITRACSENSDLPGLRFV 126
SV N++IR Y F+DA ++ +L +K + F Y C+ +A D+ R +
Sbjct: 72 SVSFANNVIREYTEDGFFDDAIGVYLKMLDDGVKVEEFRYFPCLIKAFGGLCDVYKGRQI 131
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG + G+ D ++L+T Y K ++++A+++F+ + + DLV N+MISGF +
Sbjct: 132 HGHVLKLGVLDDVSVVNSLLTMYWKCGVVEDAVQMFEKMPEVDLVSWNTMISGFQKSMDY 191
Query: 187 DKSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+SL F M+ G P+ V I L+ G+ IHG +KS D +Y+ S
Sbjct: 192 TRSLMFFRSMVWEFGIYPNRVACVSSILSCSSLQSLTHGREIHGVVVKSGLDVEEYLVSS 251
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPD-----LVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
L+ MY +C + +A ++FNS+ D V W+ +I+GY G + +AL F K+ +
Sbjct: 252 LIEMYMKCGSIKNAENIFNSILDKDSVRRNAVIWNVMISGYVSNGCFSQALLLFIKMMVW 311
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G K D + S+ + ++S ++ G IHG + + G + ++ V +AL+DMY KCG +G G
Sbjct: 312 GIKPDYSTMVSLFSLCSESLDIAFGKQIHGLIFKFGLKNNIRVETALLDMYLKCGDMGTG 371
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI-IEKGLNPDESTFSALLCACCH 419
+++F N+I +++VI G +A E F + +E GL D A+L AC
Sbjct: 372 LKIFRRSQNHNLIMWSAVISNCAQSGCPTKALELFYEFKMEDGL-ADSGILVAVLRACSS 430
Query: 420 GGLVNDGREI 429
L +G +I
Sbjct: 431 LTLKPEGMQI 440
>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Vitis vinifera]
Length = 881
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 294/547 (53%), Gaps = 8/547 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + + + +H L K L + L+ +Y+ L A++LFDK +++
Sbjct: 210 VLPVCAGEEDIEKGMAVHGLAVKLGLNEELMVNNSLIDMYSKCRFLSEAQLLFDKNDKKN 269
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-----LKPDNFTYACITRACSENSDLPGL 123
+ WNS+I YA R D F L + Q +K D FT + C E S+L L
Sbjct: 270 IVSWNSMIGGYA---REEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCLERSELQSL 326
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +HG + GL + + ++A + AY++ + + +VFD + + N+++ G+A
Sbjct: 327 KELHGYSWRHGLQSNELVANAFIAAYTRCGALCSSERVFDLMDTKTVSSWNALLCGYAQN 386
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
K+L L+ M G PD +T+ L+ L G+ IHGF L++ ++
Sbjct: 387 SDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIG 446
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
L+S+Y C +A +F+ + H LV+W+ +I GYSQ G +A+ FR++ G +
Sbjct: 447 ISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQ 506
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ I V A ++ + + G +H + ++ + VSS+++DMY+K G +GL ++
Sbjct: 507 PYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRI 566
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ + E+++ ++N +I G G+HG +A E F ++ GL PD+ TF+ +L AC H GLV
Sbjct: 567 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLV 626
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
DG E F +M + I+ K EHY +V +LG AG +++A I +P D + +LLS
Sbjct: 627 EDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSSLLS 686
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+GN L E VA++L E +P K V++SN +A G+WDDV ++R + D GL+K+
Sbjct: 687 SCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGLQKD 746
Query: 544 AGVSWVS 550
AG SW+
Sbjct: 747 AGCSWIE 753
Score = 218 bits (556), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 150/558 (26%), Positives = 276/558 (49%), Gaps = 55/558 (9%)
Query: 8 LVLELSKSHQSLSRTKELHALV-AKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
++L+ + + + LH +V A D T+++ +Y++ +R++FDK +
Sbjct: 3 VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKLRR 62
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRF 125
+++F WN+I+ AY F DA S+F L+ T+ KPDNFT C+ +AC+ DL +
Sbjct: 63 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 122
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG A L D +AL+ Y K L++EA+KVF+ + + +LV NS+I GF+ GF
Sbjct: 123 IHGMATKMDLVSDVFVGNALIAMYGKCGLVEEAVKVFEHMPERNLVSWNSIICGFSENGF 182
Query: 186 WDKSLQLFDWMLRLGK---TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+S F ML +G+ PD TLV ++ + G +HG +K + V
Sbjct: 183 LQESFNAFREML-VGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEELMV 241
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
++ L+ MY++C ++ A +F+ ++V+W+++I GY+++ D + Y +K+ +
Sbjct: 242 NNSLIDMYSKCRFLSEAQLLFDKNDKKNIVSWNSMIGGYAREEDVCRTFYLLQKMQTEDA 301
Query: 303 --KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
KAD I +VL + + + +HGY +HG + + +V++A + Y++CG L
Sbjct: 302 KMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRCGALCSS 361
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF+ M + + ++N+++ G + +A + + + + GL+PD T +LL AC
Sbjct: 362 ERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLAC--- 418
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
+RM K+ HY EE + F VDP + +
Sbjct: 419 ----------SRM--------KSLHYG------------EEIHGFALRNGLAVDPFIGIS 448
Query: 481 LLS---CCHIYGNSDLAEIVAHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDI 535
LLS CC A LF+ + ++ VM++ Y+++G D+ + L +
Sbjct: 449 LLSLYICCG-------KPFAAQVLFDGMEHRSLVSWNVMIAG-YSQNGLPDEAINLFRQM 500
Query: 536 VDNGLRK-EAGVSWVSGS 552
+ +G++ E + V G+
Sbjct: 501 LSDGIQPYEIAIMCVCGA 518
>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 312 bits (800), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 290/535 (54%), Gaps = 6/535 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQRSVFLWNSII 76
+S+ K++HA + + L DPF A+K+V +L L AR++F + P + + NSII
Sbjct: 1 MSQLKQIHAQMLRTGLFFDPFTASKIVAFCSLQESGSLQYARLVFSQIPNPTSYTCNSII 60
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R + +A ++ ++ L PD +T+ + ++C +S+ + +H + G
Sbjct: 61 RGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRNSSEG---KQIHCHSTKLGFA 117
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ + L+ YS + A KVFD + D +V +MI A +++++LFD M
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177
Query: 197 LRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
++ P+E TLV +++ L++ + IH + + F + +++VL+ +Y +C C
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A +F+ +L +W+ +I G+ + +Y +AL FR++ +G K D V +AS+L A
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ G +H Y+ + ++ V + +ALVDMY+KCG + IQVF M E++++T+
Sbjct: 298 CTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTW 357
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ILGL + G A ++F ++ KG+ PD TF +L AC H G V++G F M++
Sbjct: 358 TALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNSMSD 417
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
YGIQ EHY +V +LG AG + EA I S+P D V G LL C I+GN + AE
Sbjct: 418 TYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAE 477
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A QL E DP V+LSN Y +W++ + R+ + + G+RK G S +
Sbjct: 478 RAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIE 532
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 176/358 (49%), Gaps = 2/358 (0%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L KS ++ S K++H K D + L+ +Y+ L SAR +FDK ++V
Sbjct: 94 LFKSCRNSSEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVS 153
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGA 130
W ++I +A + N+A LF +++++ +KP+ T + AC+ DL ++ +H
Sbjct: 154 WATMIGVHAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYI 213
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
G GR + ++ L+ Y K + A +FD + +L N MI+G ++++L
Sbjct: 214 DEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEAL 273
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
LF M G D+ T+ L+ L +G+ +H + K D + + LV MY
Sbjct: 274 LLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMY 333
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + +A VF+ + D++TW+ALI G + G AL YF +++++G K D +
Sbjct: 334 AKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFV 393
Query: 311 SVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
VLAA + + V G + + +G + ++ LVD+ + G + ++ ++M
Sbjct: 394 GVLAACSHAGFVDEGISHFNSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSM 451
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 128/295 (43%), Gaps = 10/295 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + L+ K +H + + R T L+ +Y + AR LFDK +++
Sbjct: 193 VLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGCVQLARDLFDKAQEKN 252
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+F WN +I + + +A LF+ + +K D T A + AC+ L +++H
Sbjct: 253 LFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLACTHLGALELGKWLHA 312
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ D +ALV Y+K I+ AI+VF + + D++ ++I G A CG +
Sbjct: 313 YIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDVMTWTALILGLAMCGQAEN 372
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--- 245
+LQ FD M G PD T VG+++ V +GI F S D+Y ++
Sbjct: 373 ALQYFDEMHIKGVKPDAITFVGVLAACSHAGF--VDEGISHF--NSMSDTYGIQPTIEHY 428
Query: 246 --LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
LV + R + A + S+ PD L+ G+ A ++L
Sbjct: 429 GGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLEAAERAAKQL 483
>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Glycine max]
Length = 975
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 279/527 (52%), Gaps = 1/527 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L K + + LV +Y+ L AR LFD ++V WN+II Y+
Sbjct: 321 VHGLAFKLGITEEVTVNNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGD 380
Query: 85 FNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
F L + + R + ++ + T + ACS L L+ +HG A G +D + ++
Sbjct: 381 FRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVAN 440
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A V AY+K S +D A +VF G+ + N++I A GF KSL LF M+ G P
Sbjct: 441 AFVAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDP 500
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D +T+ L+ L G+ IHGF L++ + +++ L+S+Y +C+ M +F
Sbjct: 501 DRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIF 560
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + + LV W+ +ITG+SQ +AL FR++ G K + + VL A ++ + +
Sbjct: 561 DKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALR 620
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H + ++ V+ AL+DMY+KCG + +F+ ++E++ +N +I G G
Sbjct: 621 LGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVWNVIIAGYG 680
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+HG +A E F + KG PD TF +L AC H GLV +G + +M YG++ K
Sbjct: 681 IHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQNLYGVKPKL 740
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY +V +LG AG L EA + +P D + +LLS C YG+ ++ E V+ +L E
Sbjct: 741 EHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGEEVSKKLLE 800
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+P K V+LSN YA G+WD+V K+R + +NGL K+AG SW+
Sbjct: 801 LEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIE 847
Score = 202 bits (513), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/428 (28%), Positives = 225/428 (52%), Gaps = 6/428 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQ 66
++L H+++ +++HALV+ + LR D +T+++ +Y+ +R +FD +
Sbjct: 97 ILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKE 156
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRF 125
+ +FL+N+++ Y+ F DA SLF LL T L PDNFT C+ +AC+ +D+
Sbjct: 157 KDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEA 216
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH A+ +G D+ +AL+ Y K ++ A+KVF+ + + +LV NS++ + G
Sbjct: 217 VHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGG 276
Query: 186 WDKSLQLFDWML---RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+ + +F +L G PD T+V +I + +G +HG K V
Sbjct: 277 FGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAFKLGITEEVTV 336
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
++ LV MY++C + A +F+ ++V+W+ +I GYS++GD+ +++ + K
Sbjct: 337 NNSLVDMYSKCGYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDFRGVFELLQEMQREEK 396
Query: 303 -KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ + V + +VL A + + IHGY +HGF +V++A V Y+KC L
Sbjct: 397 VRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAE 456
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF M + + ++N++I +GF ++ + F +++ G++PD T +LL AC
Sbjct: 457 RVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLK 516
Query: 422 LVNDGREI 429
+ G+EI
Sbjct: 517 FLRCGKEI 524
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/450 (25%), Positives = 193/450 (42%), Gaps = 38/450 (8%)
Query: 13 SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLW 72
S HQ LS KE+H + L+D A V YA + L A +F ++V W
Sbjct: 412 SGEHQLLS-LKEIHGYAFRHGFLKDELVANAFVAAYAKCSSLDCAERVFCGMEGKTVSSW 470
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N++I A+A + LF ++ + + PD FT + AC+ L + +HG +
Sbjct: 471 NALIGAHAQNGFPGKSLDLFLVMMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLR 530
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
+GL D +L++ Y + S + +FD + + LV N MI+GF+ ++L
Sbjct: 531 NGLELDEFIGISLMSLYIQCSSMLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDT 590
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F ML G P E + G++ + S L +G+ +H F LK+ +V+ L+ MYA+
Sbjct: 591 FRQMLSGGIKPQEIAVTGVLGACSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAK 650
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C CM + ++F+ + D W+ +I GY G KA+ F + +G + D V
Sbjct: 651 CGCMEQSQNIFDRVNEKDEAVWNVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGV 710
Query: 313 LAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
L A + V G G + +G + + + +VDM + G L +++ M +
Sbjct: 711 LIACNHAGLVTEGLKYLGQMQNLYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDE- 769
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
PD +S+LL +C + G + G E+
Sbjct: 770 ---------------------------------PDSGIWSSLLSSCRNYGDLEIGEEVSK 796
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
++ E K E+Y+ + L G +E
Sbjct: 797 KLLELE--PNKAENYVLLSNLYAGLGKWDE 824
>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 285/545 (52%), Gaps = 6/545 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + SL K LHAL ++ D F LV +Y+ + A +F K
Sbjct: 57 VLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPD 116
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W+++I +A LF + R +P+ FT + + + DL + +HG
Sbjct: 117 VVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHG 176
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G D++ S+ L+ Y K +++ KVF+ +++PDLV N+++SGF +
Sbjct: 177 CICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++F ML G P+ +T + ++ S L +P G+ +H +K+S D D+V +
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEF---GKQVHAHIIKNSSDDDDFVGTA 293
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MYA+ C+ A F+ L + D+ +W+ +I+GY+Q KA+ YFR++ +G K +
Sbjct: 294 LVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPN 353
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+AS L+ + A + G +H ++ G + V SALVD+Y KCG + +F+
Sbjct: 354 EYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFK 413
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ R+I+++N++I G HG +A E FR ++ +G+ PDE+TF +L AC GLV +
Sbjct: 414 GLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEE 473
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G++ F M++ YGI EHY MV +LG AG E FI + + +L C
Sbjct: 474 GKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGAC 533
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++GN D E A +LFE +P + ++LSN +A GRWDDV +R + G++KE G
Sbjct: 534 KLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPG 593
Query: 546 VSWVS 550
SWV
Sbjct: 594 CSWVE 598
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 206/419 (49%), Gaps = 13/419 (3%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
A LF P+++ WN+++ YA LF + + K FT + + + C+
Sbjct: 4 AERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCAN 63
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
L + +H A+ SG D +LV YSK + +A+KVF + +PD+V ++M
Sbjct: 64 TGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAWSAM 123
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
I+G G ++ +LF M R G P+++TL L+S L GQ IHG K F
Sbjct: 124 ITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGF 183
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+S + VS+ L+ MY + C+ VF ++ +PDLV+W+AL++G+ G+ F +
Sbjct: 184 ESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGRGPRIFYQ 243
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ ++G K + SVL + + + G +H ++I++ + V +ALVDMY+K
Sbjct: 244 MLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVDMYAKARC 303
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
L F+ + R+I ++ +I G +A ++FR + +G+ P+E T ++ L
Sbjct: 304 LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSG 363
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHY--IY----MVKLLGLAGNLEEAYSFIWSL 469
C H + +GR++ + + K H+ I+ +V L G G +E A + L
Sbjct: 364 CSHMATLENGRQL-------HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFKGL 415
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 92/174 (52%)
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M A +F + + V+W+AL+ GY+Q GD K L F K+ K +++VL
Sbjct: 1 MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A + ++ G V+H ++ G E+ + +LVDMYSKCG + ++VF + +++ +
Sbjct: 61 CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKIRNPDVVAW 120
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++I GL G +A E F + KG P++ T S+L+ + G + G+ I
Sbjct: 121 SAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSI 174
>gi|224121686|ref|XP_002318647.1| predicted protein [Populus trichocarpa]
gi|222859320|gb|EEE96867.1| predicted protein [Populus trichocarpa]
Length = 744
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 178/542 (32%), Positives = 293/542 (54%), Gaps = 7/542 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ-----RSV 69
S + L+ E+H + K + D F + L+ +Y + +A +F++ R++
Sbjct: 154 SIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNM 213
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
+WN +I Y + A LF +L + PD+ T + CS+ DL + +HG
Sbjct: 214 AVWNVMILGYVSNECLSLALELFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGL 273
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ GL D +AL+ Y K + ++++F + +LV+ S++ A G+ +++
Sbjct: 274 ILGLGLDDDVRVGTALMEMYFKCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEA 333
Query: 190 LQLF-DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+ F ++ML G PD L+ + SL G IHGF +K FDS +V LV
Sbjct: 334 LEFFSEFMLDCG-FPDPVILLAALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVD 392
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
Y +C M A VF L DLV+W+ALI+G++Q +AL FR + + K + V
Sbjct: 393 FYGKCGDMEYAQQVFYGLSTRDLVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVT 452
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+A +L+ + + +H Y+++H FE + +V+++L+ Y+KCG + VFE +
Sbjct: 453 MACILSVCTHLSVMILCKEVHCYLLRHWFETNALVNNSLISAYAKCGDIHSSRTVFEKLP 512
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
RN +T+NS++LG G+HG T + F F + E + PD TF++LL +C H G V+ G +
Sbjct: 513 VRNEVTWNSILLGFGMHGRTDEMFATFEKMKEANIKPDHGTFTSLLSSCSHSGKVDAGWK 572
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M E+Y ++ + E Y MV LLG AGNL +AY I S+P D + G+LL+ C +
Sbjct: 573 YFNSMMEDYNLEPRVEQYTCMVDLLGRAGNLNQAYDLIMSMPCSPDDRIWGSLLASCKNH 632
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN+ LAE+VA+ +FE D Y+V+L+N Y + G ++V ++R DI GL+K+ G SW
Sbjct: 633 GNTKLAEVVANHIFELDASSVGYRVLLANLYEDSGNLNEVFRVRTDIKQMGLKKQPGCSW 692
Query: 549 VS 550
+
Sbjct: 693 IE 694
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 200/408 (49%), Gaps = 7/408 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+++ K++H + K L+D F L+ +Y +A +F++ +R WN++I
Sbjct: 55 VNKGKQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISG 114
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACIT--RACSENSDLPGLRFVHGGAIVSGLG 136
+ + + + +F+ +++ + AC+ +C+ L +HG + G+
Sbjct: 115 FCQSGDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVD 174
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV-----LCNSMISGFAHCGFWDKSLQ 191
D SAL+ Y K I A VF+ + D +LV + N MI G+ +L+
Sbjct: 175 SDEFLVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALE 234
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF ML LG +PD T+V ++ + L+VG+ IHG L D V + L+ MY
Sbjct: 235 LFVEMLELGISPDSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYF 294
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C ++ +F + +LV W +++ +Q G +AL +F + + DPV++ +
Sbjct: 295 KCGDPETSLQIFKRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLA 354
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
L A + + G IHG+ I+ GF+ V V ALVD Y KCG + QVF +S R+
Sbjct: 355 ALRACSFLSLKPRGMAIHGFAIKMGFDSDVFVGGALVDFYGKCGDMEYAQQVFYGLSTRD 414
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++++N++I G + +A + FRD+ K + P+ T + +L C H
Sbjct: 415 LVSWNALISGFAQNKCADEALKAFRDMQSKQIKPNTVTMACILSVCTH 462
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 165/353 (46%), Gaps = 8/353 (2%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTY-ACITRACSENSDLPGLRFVHGGAI 131
N +I+ F DA ++ + + + F + C+ +A D+ + +HG +
Sbjct: 7 NRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYDVNKGKQIHGHLL 66
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G +D ++L+ Y K A+ +F+ + + D V N+MISGF G + KSL
Sbjct: 67 KFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQSGDYVKSLV 126
Query: 192 LFDWMLRL--GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+F M++ G + + +S L+ G IHGF +K DS +++ S L+ M
Sbjct: 127 MFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEFLVSALIEM 186
Query: 250 YARCNCMNSAYHVF-----NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
Y +C + +A +VF N L ++ W+ +I GY AL F ++ G
Sbjct: 187 YMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVEMLELGISP 246
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + VL ++ ++ G IHG ++ G + V V +AL++MY KCG +Q+F
Sbjct: 247 DSSTVVVVLVLCSQLLDLAVGKQIHGLILGLGLDDDVRVGTALMEMYFKCGDPETSLQIF 306
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ N++ + SV+L +G+ +A EFF + + PD A L AC
Sbjct: 307 KRSQNHNLVMWGSVMLNCAQNGYPNEALEFFSEFMLDCGFPDPVILLAALRAC 359
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 134/260 (51%), Gaps = 14/260 (5%)
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEY----TLVGLISGLWEPSLLSVG 224
D+ N MI GF++ +++++ + G +E+ L+ GL++ ++ G
Sbjct: 2 DVSKVNRMIKECTEDGFFEDAIRVYLDFIECGFPVEEFRFFPCLIKAFGGLYD---VNKG 58
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ IHG LK F +V + L+ MY +C +A +F + D V+W+ +I+G+ Q
Sbjct: 59 KQIHGHLLKFGFLQDIFVKNSLLGMYWKCGAGGNAVDMFERMEERDSVSWNTMISGFCQS 118
Query: 285 GDYGKALYYFRKLNMQ--GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
GDY K+L FR++ + G + V + L++ A + G IHG++++ G +
Sbjct: 119 GDYVKSLVMFRRMVKECGGSYHNRVACLAALSSCASIKCLTHGLEIHGFLVKKGVDSDEF 178
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSE-----RNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ SAL++MY KCG + VFE + + RN+ +N +ILG + A E F +
Sbjct: 179 LVSALIEMYMKCGDIKNAENVFERIRDNELVGRNMAVWNVMILGYVSNECLSLALELFVE 238
Query: 398 IIEKGLNPDESTFSALLCAC 417
++E G++PD ST +L C
Sbjct: 239 MLELGISPDSSTVVVVLVLC 258
>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 311 bits (798), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/553 (32%), Positives = 304/553 (54%), Gaps = 7/553 (1%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
+ +N +L L++ + L R KE+H + S + F T +V +YA + A +
Sbjct: 146 VVYNFTYL-LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ---LKPDNFTYACITRACSEN 117
FD+ P+R + WN+II ++ + AK + +LR Q +PD+ T + A ++
Sbjct: 205 FDRMPERDLVSWNTIIAGFS---QNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
L + +HG AI +G + S+AL YSK ++ A +FDG+ +V NSM+
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G+ G +K++ +F+ ML G P T++ + + L G+ +H F + +
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 381
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
S V + L+SMY++C ++ A +FN+L V+W+A+I GY+Q G +AL F ++
Sbjct: 382 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G K D + SV+ A A+ + IHG +I+ + ++ V++ALVDMYSKCG +
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ ++F+ +S+R++IT+N++I G G HG A + F + + + P++ T+ +++ AC
Sbjct: 502 HMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 561
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H GLV++G F M ++YG++ +HY MV LLG AG ++EA+ FI ++P V
Sbjct: 562 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITV 621
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
GA+L C I+ N ++ E A +LFE +P +G Y V+L+N YA +W V ++R +
Sbjct: 622 YGAMLGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEK 681
Query: 538 NGLRKEAGVSWVS 550
GL+K G S V
Sbjct: 682 KGLKKTPGCSVVE 694
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 206/397 (51%), Gaps = 3/397 (0%)
Query: 23 KELH---ALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
KELH LV K L + + TKLV L++ + A +F+ + L++++++ Y
Sbjct: 63 KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A A + + +KP + + + + C +N+DL + +HG I + +
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANV 182
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ +V Y+K ID+A K+FD + + DLV N++I+GF+ GF K+L+L M
Sbjct: 183 FAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDE 242
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G+ PD TLV ++ + LL VG+ IHG+ +++ F +S+ L MY++C + +A
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETA 302
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F+ + +V+W++++ GY Q G+ KA+ F K+ +G V I L A A
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADL 362
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++ G +H +V Q + V ++L+ MYSKC + + +F ++ R +++N++I
Sbjct: 363 GDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMI 422
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
LG +G +A F ++ G+ PD T +++ A
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPA 459
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 161/297 (54%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
I +GL + + + LV+ +SK I+EA +VF+ + D L ++M+ G+A + +L
Sbjct: 73 IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
M P Y L+ + + L G+ IHG + +SF + + + +V+MY
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMY 192
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C ++ AY +F+ + DLV+W+ +I G+SQ G KAL ++ +G++ D + +
Sbjct: 193 AKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+VL AAA + G IHGY I+ GF V +S+AL DMYSKCG + +F+ M ++
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
++++NS++ G +G +A F ++E+G++P T L AC G + G+
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LVS++++ +N A VF + + ++ GY++ AL + ++ K
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+L +A++ G IHG +I + F +V + +V+MY+KC + ++F+
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M ER+++++N++I G +GF +A E + ++G PD T +L A GL+
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
G+ I Y I+A KL+ ++ L + YS
Sbjct: 267 GKSI-----HGYAIRAG------FAKLVNISTALADMYS 294
>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 919
Score = 311 bits (797), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 170/532 (31%), Positives = 275/532 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K+LH+ + KA + D L+ LY + + A +FD + +V LWN ++ A
Sbjct: 260 LRKGKQLHSYLLKAGMSLDYIMEGSLLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVA 319
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + +F +L ++P+ FTY C+ R C+ ++ +H I +G D
Sbjct: 320 YGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSD 379
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +D+A ++ D + + D+V SMI+G+ F ++L+ F M
Sbjct: 380 MYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQA 439
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L IS + G IH S + + + + LV +YARC
Sbjct: 440 CGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKE 499
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ F ++ H + +TW+ LI+G++Q G Y +AL F K++ G K + S ++A+A
Sbjct: 500 AFSSFEAIEHKEGITWNGLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASAN 559
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A++ G IH VI+ G+ +S+AL+ +Y KCG + F M++RN +++N++
Sbjct: 560 LADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTI 619
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + F + ++GL P + TF +L AC H GLV +G F M+ E+G
Sbjct: 620 ITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHG 679
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I + +HY +V +LG AG L+ A F+ +P P D V LLS C ++ N ++ E A
Sbjct: 680 IHPRPDHYACVVDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSACKVHKNLEIGEFAA 739
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA G+W ++R + D G+RKE G SW+
Sbjct: 740 KHLLELEPHDSASYVLLSNAYAVTGKWASRDQIRKIMKDRGVRKEPGRSWIE 791
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/485 (25%), Positives = 228/485 (47%), Gaps = 6/485 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H V K + F L+ LY A +F +N++I +A
Sbjct: 165 IHVQVYKQGFFSETFVGNALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGH 224
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ A +F + + L PD+ T A + ACS DL + +H + +G+ D I +
Sbjct: 225 GDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYIMEGS 284
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K I+EA+++FD ++VL N M+ + KS +F ML G P+
Sbjct: 285 LLDLYVKSGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPN 344
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++T ++ + +G+ IH +K+ F S YVS VL+ MY++ ++ A + +
Sbjct: 345 KFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILD 404
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+V+W+++I GY Q +AL F+++ G D + +AS ++A A V
Sbjct: 405 MIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQ 464
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G+ IH V G+ V + + LV +Y++CG FE + + IT+N +I G
Sbjct: 465 GSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQ 524
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G +A + F + + G + TF + + A + + G++I R+ + G ++TE
Sbjct: 525 SGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKT-GYTSETE 583
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
++ L G G++E+A + + K + + + +++CC +G + A LF+
Sbjct: 584 ISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWN-TIITCCSQHGRG----LEALDLFDQ 638
Query: 505 DPRKG 509
++G
Sbjct: 639 MKQQG 643
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 207/442 (46%), Gaps = 3/442 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA L L+ LYA + AR +F++ R W +++ YA
Sbjct: 63 EIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEELSVRDNVSWVAVLSGYAQNG 122
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A L++ + R+ + P + + I AC++ R +H G ++ +
Sbjct: 123 LGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSETFVGN 182
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL++ Y + A +VF + D V N++ISG A CG D++L +FD M G +P
Sbjct: 183 ALISLYLRCRSFRLADRVFCDMLYCDSVTFNTLISGHAQCGHGDRALGIFDEMQLSGLSP 242
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHV 262
D T+ L++ L G+ +H + LK+ S DY+ L+ +Y + + A +
Sbjct: 243 DSVTIASLLAACSAVGDLRKGKQLHSYLLKAGM-SLDYIMEGSLLDLYVKSGDIEEALQI 301
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+S ++V W+ ++ Y Q D K+ F ++ G + + +L + +
Sbjct: 302 FDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRTCTHTGEI 361
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH I++GF+ + VS L+DMYSK G+L ++ + + E++++++ S+I G
Sbjct: 362 GLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWLDKAQRILDMIEEKDVVSWTSMIAGY 421
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
H F +A E F+++ G+ PD ++ + AC V+ G +I R+ G A
Sbjct: 422 VQHEFCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHARVYVS-GYSAD 480
Query: 443 TEHYIYMVKLLGLAGNLEEAYS 464
+ +V L G +EA+S
Sbjct: 481 VSIWNGLVYLYARCGISKEAFS 502
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 20/275 (7%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++ + ++HA V + D LV LYA + A F+ + WN +I
Sbjct: 460 KAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLI 519
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+A + + +A +F + + K + FT+ A + +D+ + +H I +G
Sbjct: 520 SGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYT 579
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
++ S+AL++ Y K I++A F ++ + V N++I+ + G ++L LFD M
Sbjct: 580 SETEISNALISLYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQM 639
Query: 197 LRLGKTPDEYTLVGLIS-----GLWEPSL-----LSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ G P + T VG+++ GL E L +S GIH D Y + +
Sbjct: 640 KQQGLKPSDVTFVGVLTACSHVGLVEEGLCYFKSMSNEHGIH-----PRPDHY----ACV 690
Query: 247 VSMYARCNCMNSAYHVFNSLFHP-DLVTWSALITG 280
V + R ++ A + P D + W L++
Sbjct: 691 VDILGRAGQLDRAKRFVEEMPIPADSMVWRTLLSA 725
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 3 FNLHFLVLELSKSHQ--SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
+N+ V +S S + + K++HA V K + + L+ LY + A++
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALISLYGKCGSIEDAKMD 604
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
F + +R+ WN+II + R +A LF + + LKP + T+ + ACS
Sbjct: 605 FFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVTFVGVLTACS 659
>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
[Vitis vinifera]
gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
Length = 742
Score = 311 bits (796), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 177/529 (33%), Positives = 293/529 (55%), Gaps = 5/529 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA + + L+ F TK V + AR +FD+ P+ SVFLWN+IIR Y+ +
Sbjct: 89 QIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHN 148
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
F DA ++ + + + PD FT C+ +ACS L + VHG G D +
Sbjct: 149 FFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQN 208
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
LV Y+K +++A VF+G+ D ++V SMISG+ G ++L++F M + P
Sbjct: 209 GLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKP 268
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D LV ++ + L G+ IHG +K + + L +MYA+C + A F
Sbjct: 269 DWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFF 328
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + P+++ W+A+I+GY++ G +A+ F+++ + + D + + S + A A+ ++
Sbjct: 329 DQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLD 388
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
+ Y+ + + V V++AL+DM++KCG + L +VF+ +++++ ++++I+G G
Sbjct: 389 LAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYG 448
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
LHG A + F + + G+ P++ TF LL AC H GLV +G E+F M + YGI+A+
Sbjct: 449 LHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARH 507
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQL 501
+HY +V LLG +G+L EAY FI ++ P++P VS GALL C IY + L E A QL
Sbjct: 508 QHYACVVDLLGRSGHLNEAYDFITTM--PIEPGVSVWGALLGACKIYRHVTLGEYAAEQL 565
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
F DP + V LSN YA WD V K+R + + GL K+ G S +
Sbjct: 566 FSLDPFNTGHYVQLSNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIE 614
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 156/299 (52%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
L +H +VSGL + V A + I A KVFD +P + L N++I G++
Sbjct: 87 LNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSS 146
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
F+ +++++ M G PD +TL ++ +L VG+ +HG + F+S +V
Sbjct: 147 HNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFV 206
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV++YA+C + A VF L ++V+W+++I+GY Q G +AL F ++ +
Sbjct: 207 QNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNV 266
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D + + SVL A ++ G IHG V++ G E + +L MY+KCG + +
Sbjct: 267 KPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARS 326
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
F+ M N++ +N++I G +G+T +A F+++I K + D T + + AC G
Sbjct: 327 FFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVG 385
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 161/359 (44%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H + + D F LV LYA + ARI+F+ R++ W S+I Y
Sbjct: 189 KRVHGQIFRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQN 248
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A +F + + +KPD + RA ++ DL + +HG + GL +
Sbjct: 249 GLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLL 308
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+L Y+K + A FD + P++++ N+MISG+A G+ ++++ LF M+
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIR 368
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D T+ I + L + + + + K+ + + +V++ L+ M+A+C ++ A V
Sbjct: 369 TDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFAKCGSVDLAREV 428
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ D+V WSA+I GY G A+ F + G + V +L A S V
Sbjct: 429 FDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLV 488
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G + + +G E + +VD+ + G+L TM ++ +LG
Sbjct: 489 EEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEPGVSVWGALLG 547
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 122/271 (45%), Gaps = 1/271 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + L + K +H V K L +P L +YA + AR FD+ +
Sbjct: 276 VLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPN 335
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +WN++I YA N+A LF+ ++ ++ D+ T AC++ L +++
Sbjct: 336 VMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGD 395
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ D ++AL+ ++K +D A +VFD D D+V+ ++MI G+ G
Sbjct: 396 YINKTEYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQD 455
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ LF M + G P++ T VGL++ L+ G + ++ + +V
Sbjct: 456 AIDLFYAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVD 515
Query: 249 MYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ R +N AY ++ P + W AL+
Sbjct: 516 LLGRSGHLNEAYDFITTMPIEPGVSVWGALL 546
>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
[Vitis vinifera]
gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
Length = 703
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 177/524 (33%), Positives = 281/524 (53%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
HA+ K RD F + L+ +Y + P AR +FD P+R+ W ++I YA
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLA 190
Query: 86 NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSAL 145
+A LF+ + R + + F + + A + + + +H A+ +GL +AL
Sbjct: 191 AEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNAL 250
Query: 146 VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDE 205
VT Y+K +D+A++ F+ SD + + ++MI+G+A G DK+L+LF M G P E
Sbjct: 251 VTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLSGIRPSE 310
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
+T VG+I+ + G+ +H + LK F+S YV + LV MYA+C+ + A F+
Sbjct: 311 FTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDY 370
Query: 266 LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG 325
L PD+V W+++I GY Q G+ AL + ++ M+G + + +ASVL A + A + G
Sbjct: 371 LQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQG 430
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
IH +++GF L V + SAL MY+KCG L G VF M R++I++N++I GL +
Sbjct: 431 KQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQN 490
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEH 445
G +A E F ++ +G PD TF +L AC H GLV G F M +E+G+ + EH
Sbjct: 491 GCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEH 550
Query: 446 YIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEND 505
Y MV +L AG L+EA F S + +L C Y N +L +L E
Sbjct: 551 YACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELG 610
Query: 506 PRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ + V+LS+ Y+ GRW+DV ++R + G+ KE G SW+
Sbjct: 611 SQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWI 654
Score = 213 bits (543), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 219/438 (50%), Gaps = 5/438 (1%)
Query: 4 NLHFLVLELSKSH-QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
N F L +H +SL + K LHA + K+S + A LV LYA L A+ +F+
Sbjct: 6 NRSFFTALLQYTHNRSLQKGKALHAQIIKSSS-SCVYIANSLVNLYAKCQRLREAKFVFE 64
Query: 63 KTPQRSVFLWNSIIRAYAL--AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
+ + V WN II Y+ + LF+ + P+ T+A + A S D
Sbjct: 65 RIQNKDVVSWNCIINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDA 124
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
G R H AI RD S+L+ Y K L EA KVFD + + + V +MISG+
Sbjct: 125 AGGRLAHAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGY 184
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
A ++L LF M R + +E+ ++S L P L++ G+ IH +K+ S
Sbjct: 185 ASQKLAAEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIV 244
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + LV+MYA+C ++ A F + + +TWSA+ITGY+Q GD KAL F +++
Sbjct: 245 SVGNALVTMYAKCGSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDKALKLFSSMHLS 304
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + V+ A + W G +H Y+++ GFE + V +ALVDMY+KC +
Sbjct: 305 GIRPSEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDA 364
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+ F+ + E +I+ + S+I G +G A + + +G+ P+E T +++L AC
Sbjct: 365 RKGFDYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSL 424
Query: 421 GLVNDGREIFTRMTEEYG 438
+ G++I R T +YG
Sbjct: 425 AALEQGKQIHAR-TVKYG 441
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 130/308 (42%), Gaps = 12/308 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H + K + T LV +YA + + AR FD + + LW S+I Y
Sbjct: 330 KQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQN 389
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
DA SL+ + + P+ T A + +ACS + L + +H + G G +
Sbjct: 390 GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIG 449
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL T Y+K + + VF + D++ N+MISG + G ++L+LF+ M G
Sbjct: 450 SALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTK 509
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYARCNCMN 257
PD T V ++S L+ G G + FD + V +V + +R +
Sbjct: 510 PDYVTFVNILSACSHMGLVERGWGY----FRMMFDEFGMDPRVEHYACMVDILSRAGKLK 565
Query: 258 SAYHVFNS-LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLA 314
A S + W ++ +Y Y KL G + VL++S+ +
Sbjct: 566 EAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLMELGSQESSAYVLLSSIYS 625
Query: 315 AAAKSANV 322
A + +V
Sbjct: 626 ALGRWEDV 633
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S +L + K++HA K + + L +YA L ++F + P R
Sbjct: 417 VLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V WN++I + +A LF+ + KPD T+ I ACS
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACS 523
>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Glycine max]
Length = 882
Score = 310 bits (795), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 286/542 (52%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L R +E+H V + D L+ +Y + +AR++FDK P R
Sbjct: 213 VLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRD 272
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN++I Y + LF +++ + PD T + AC D R +HG
Sbjct: 273 RISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHG 332
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + GRD ++L+ YS + LI+EA VF DLV +MISG+ +C K
Sbjct: 333 YVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQK 392
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+ + M G PDE T+ ++S L +G +H + SY V++ L+
Sbjct: 393 ALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLID 452
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C C++ A +F+S ++V+W+++I G +AL++FR++ ++ K + V
Sbjct: 453 MYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREM-IRRLKPNSVT 511
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ VL+A A+ + G IH + ++ G + +A++DMY +CG + + F ++
Sbjct: 512 LVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVRCGRMEYAWKQFFSV- 570
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ + ++N ++ G G A E F+ ++E ++P+E TF ++LCAC G+V +G E
Sbjct: 571 DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISILCACSRSGMVAEGLE 630
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M +Y I +HY +V LLG +G LEEAY FI +P DPAV GALL+ C I+
Sbjct: 631 YFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKPDPAVWGALLNSCRIH 690
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ +L E+ A +F++D Y ++LSN YA++G+WD V ++R + NGL + G SW
Sbjct: 691 HHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRKMMRQNGLIVDPGCSW 750
Query: 549 VS 550
V
Sbjct: 751 VE 752
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 117/376 (31%), Positives = 201/376 (53%), Gaps = 1/376 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L A +F + +R++F WN ++ YA A F++A L+ +L +KPD +T+ C+ R
Sbjct: 157 LVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGVKPDVYTFPCVLRT 216
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C +L R +H I G D +AL+T Y K ++ A VFD + + D +
Sbjct: 217 CGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVKCGDVNTARLVFDKMPNRDRISW 276
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+MISG+ G + L+LF M++ PD T+ +I+ +G+ IHG+ L+
Sbjct: 277 NAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELLGDDRLGRQIHGYVLR 336
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ F + + L+ MY+ + A VF+ DLV+W+A+I+GY KAL
Sbjct: 337 TEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRDLVSWTAMISGYENCLMPQKALET 396
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
++ + +G D + IA VL+A + N+ G +H Q G +V+++L+DMY+K
Sbjct: 397 YKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQKGLVSYSIVANSLIDMYAK 456
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
C + +++F + E+NI+++ S+ILGL ++ ++A FFR++I + L P+ T +
Sbjct: 457 CKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFFFREMIRR-LKPNSVTLVCV 515
Query: 414 LCACCHGGLVNDGREI 429
L AC G + G+EI
Sbjct: 516 LSACARIGALTCGKEI 531
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 166/346 (47%), Gaps = 2/346 (0%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS-ENSDLPGLRFVHGGAI 131
NS I L + A S ++ ++ ++ Y + R C + + G R V+
Sbjct: 75 NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSR-VYSYVS 133
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+S +AL++ + + + +A VF + +L N ++ G+A G +D++L
Sbjct: 134 ISMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALD 193
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
L+ ML +G PD YT ++ L G+ IH ++ F+S V + L++MY
Sbjct: 194 LYHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYV 253
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C +N+A VF+ + + D ++W+A+I+GY + G + L F + D + + S
Sbjct: 254 KCGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTS 313
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
V+ A + G IHGYV++ F + ++L+ MYS G + VF R+
Sbjct: 314 VITACELLGDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSVGLIEEAETVFSRTECRD 373
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++++ ++I G +A E ++ + +G+ PDE T + +L AC
Sbjct: 374 LVSWTAMISGYENCLMPQKALETYKMMEAEGIMPDEITIAIVLSAC 419
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 122/256 (47%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
NS I G D+++ D M L ++ V LI G ++ +
Sbjct: 75 NSHIYQLCLLGNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSI 134
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
S + + L+SM+ R + A++VF + +L +W+ L+ GY++ G + +AL
Sbjct: 135 SMSHLSLQLGNALLSMFVRFGNLVDAWYVFGRMEKRNLFSWNVLVGGYAKAGLFDEALDL 194
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
+ ++ G K D VL N+ G IH +VI++GFE V V +AL+ MY K
Sbjct: 195 YHRMLWVGVKPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYGFESDVDVVNALITMYVK 254
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + VF+ M R+ I++N++I G +G + F +I+ ++PD T +++
Sbjct: 255 CGDVNTARLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSV 314
Query: 414 LCACCHGGLVNDGREI 429
+ AC G GR+I
Sbjct: 315 ITACELLGDDRLGRQI 330
>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 293/550 (53%), Gaps = 5/550 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
+N +L L++ L KE+H L+ K+ D F T L +YA + AR +FD
Sbjct: 136 YNFTYL-LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFD 194
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R + WN+I+ Y+ A + K++ LKP T + A S +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +HG A+ SG S+ALV Y+K ++ A ++FDG+ + ++V NSMI +
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+++ +F ML G P + +++G + + L G+ IH ++ D V
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSV 374
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+SMY +C +++A +F L LV+W+A+I G++Q G AL YF ++ +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV 434
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D SV+ A A+ + IHG V++ + +V V++ALVDMY+KCG + +
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ MSER++ T+N++I G G HGF A E F ++ + + P+ TF +++ AC H GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGL 554
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GA 480
V G + F M E Y I+ +HY MV LLG AG L EA+ FI + PV PAV+ GA
Sbjct: 555 VEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQM--PVKPAVNVYGA 612
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
+L C I+ N + AE A +LFE +P G Y V+L+N Y W+ V ++R ++ GL
Sbjct: 613 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 541 RKEAGVSWVS 550
RK G S V
Sbjct: 673 RKTPGCSMVE 682
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 104/399 (26%), Positives = 208/399 (52%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL +++ LV K L ++ F+ TKLV L+ + A +F+ + L++++++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+A + A F + ++P + + + + C + ++L + +HG + SG
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + L Y+K ++EA KVFD + + DLV N++++G++ G +L++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
P T+V ++ + L+SVG+ IHG+ ++S FDS +S+ LV MYA+C +
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A +F+ + ++V+W+++I Y Q + +A+ F+K+ +G K V + L A A
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G IH ++ G + +V V ++L+ MY KC + +F + R ++++N+
Sbjct: 349 DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNA 408
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ILG +G A +F + + + PD T+ +++ A
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/322 (32%), Positives = 170/322 (52%), Gaps = 1/322 (0%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
S L LR + +GL ++ + LV+ + + +DEA +VF+ + VL ++M+
Sbjct: 48 SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTML 107
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
GFA DK+LQ F M P Y L+ + + L VG+ IHG +KS F
Sbjct: 108 KGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ + L +MYA+C +N A VF+ + DLV+W+ ++ GYSQ G AL + +
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ K + I SVL A + + G IHGY ++ GF+ V +S+ALVDMY+KCG L
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSL 287
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
Q+F+ M ERN++++NS+I + +A F+ ++++G+ P + + L AC
Sbjct: 288 ETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 418 CHGGLVNDGREIFTRMTEEYGI 439
G + GR I +++ E G+
Sbjct: 348 ADLGDLERGRFIH-KLSVELGL 368
>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 290/543 (53%), Gaps = 4/543 (0%)
Query: 12 LSKSHQSLSRT---KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+SKS SL ++LH + K+ LV Y N + SAR +FD+ +R
Sbjct: 50 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 109
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNSII Y S+F +L + ++ D T + C+++ + R VH
Sbjct: 110 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 169
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + R+ + L+ YSK +D A VF +SD +V SMI+G+A G +
Sbjct: 170 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 229
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++LF+ M G +PD YT+ +++ LL G+ +H + ++ +VS+ L+
Sbjct: 230 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 289
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MYA+C M A VF+ + D+++W+ +I GYS+ +AL F L + + D
Sbjct: 290 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 349
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A VL A A + G IHGY++++G+ V+++LVDMY+KCG L L +F+ +
Sbjct: 350 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 409
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++++++ +I G G+HGF +A F + + G+ DE +F +LL AC H GLV++G
Sbjct: 410 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 469
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M E I+ EHY +V +L G+L +AY FI ++P P D + GALL C I
Sbjct: 470 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 529
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + LAE VA ++FE +P Y V+++N YAE +W+ V +LR I GLRK G S
Sbjct: 530 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 589
Query: 548 WVS 550
W+
Sbjct: 590 WIE 592
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 204/370 (55%), Gaps = 1/370 (0%)
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FD+ WN ++ A + F+ + LFK ++ + ++ D++T++C++++ S +
Sbjct: 1 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
G +HG + SG G + ++LV Y K +D A KVFD +++ D++ NS+I+G+
Sbjct: 61 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 120
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G +K L +F ML G D T+V + +G + L+S+G+ +H +K+ F D
Sbjct: 121 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 180
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+ L+ MY++C ++SA VF + +V+++++I GY+++G G+A+ F ++ +
Sbjct: 181 RFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE 240
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G D + +VL A+ + G +H ++ ++ + VS+AL+DMY+KCG +
Sbjct: 241 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 300
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCH 419
VF M ++II++N++I G + + +A F ++ EK +PDE T + +L AC
Sbjct: 301 ELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACAS 360
Query: 420 GGLVNDGREI 429
+ GREI
Sbjct: 361 LSAFDKGREI 370
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 146/327 (44%), Gaps = 21/327 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL ++ L K +H + + L D F + L+ +YA + A ++F + +
Sbjct: 252 VLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD 311
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN+II Y+ N+A SLF LL + PD T AC+ AC+ S R +H
Sbjct: 312 IISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIH 371
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + +G D +++LV Y+K + A +FD ++ DLV MI+G+ GF
Sbjct: 372 GYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGK 431
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYV 242
+++ LF+ M + G DE + V L+ L+ G H ++ + + Y
Sbjct: 432 EAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHY--- 488
Query: 243 SSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ +V M AR + AY ++ PD W AL+ G D A K+ +
Sbjct: 489 -ACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA----EKVAEKV 543
Query: 302 KKADP------VLIASVLAAAAKSANV 322
+ +P VL+A++ A A K V
Sbjct: 544 FELEPENTGYYVLMANIYAEAEKWEQV 570
>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g18750, chloroplastic; Flags: Precursor
gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/543 (33%), Positives = 290/543 (53%), Gaps = 4/543 (0%)
Query: 12 LSKSHQSLSRT---KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+SKS SL ++LH + K+ LV Y N + SAR +FD+ +R
Sbjct: 201 VSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERD 260
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNSII Y S+F +L + ++ D T + C+++ + R VH
Sbjct: 261 VISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + R+ + L+ YSK +D A VF +SD +V SMI+G+A G +
Sbjct: 321 IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGE 380
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++LF+ M G +PD YT+ +++ LL G+ +H + ++ +VS+ L+
Sbjct: 381 AVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMD 440
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MYA+C M A VF+ + D+++W+ +I GYS+ +AL F L + + D
Sbjct: 441 MYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDER 500
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A VL A A + G IHGY++++G+ V+++LVDMY+KCG L L +F+ +
Sbjct: 501 TVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 560
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++++++ +I G G+HGF +A F + + G+ DE +F +LL AC H GLV++G
Sbjct: 561 ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW 620
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M E I+ EHY +V +L G+L +AY FI ++P P D + GALL C I
Sbjct: 621 RFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRI 680
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + LAE VA ++FE +P Y V+++N YAE +W+ V +LR I GLRK G S
Sbjct: 681 HHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCS 740
Query: 548 WVS 550
W+
Sbjct: 741 WIE 743
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 225/422 (53%), Gaps = 1/422 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L +SL KE+ + + D +KL +Y L A +FD+
Sbjct: 100 VLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK 159
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN ++ A + F+ + LFK ++ + ++ D++T++C++++ S + G +HG
Sbjct: 160 ALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SG G + ++LV Y K +D A KVFD +++ D++ NS+I+G+ G +K
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEK 279
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L +F ML G D T+V + +G + L+S+G+ +H +K+ F D + L+
Sbjct: 280 GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLD 339
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C ++SA VF + +V+++++I GY+++G G+A+ F ++ +G D
Sbjct: 340 MYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ +VL A+ + G +H ++ ++ + VS+AL+DMY+KCG + VF M
Sbjct: 400 VTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMR 459
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHGGLVNDGR 427
++II++N++I G + + +A F ++ EK +PDE T + +L AC + GR
Sbjct: 460 VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGR 519
Query: 428 EI 429
EI
Sbjct: 520 EI 521
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 157 EAIKVFD-GVSDPDLVLCNSMISGFAHCGFWDKSLQLF----DWMLRLGKTPDEYTLVGL 211
++I FD V+D N+ + F G + +++L W + D TL +
Sbjct: 52 DSITTFDRSVTDA-----NTQLRRFCESGNLENAVKLLCVSGKWDI------DPRTLCSV 100
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+ + L G+ + F + F + S L MY C + A VF+ +
Sbjct: 101 LQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKA 160
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
+ W+ L+ ++ GD+ ++ F+K+ G + D + V + + +V G +HG+
Sbjct: 161 LFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGF 220
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+++ GF V ++LV Y K + +VF+ M+ER++I++NS+I G +G +
Sbjct: 221 ILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 280
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
F ++ G+ D +T ++ C L++ GR + +
Sbjct: 281 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHS 320
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S + + +E+H + + D A LV +YA L A +LFD +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRF 125
+ W +I Y + +A +LF + + ++ D ++ + ACS + + G RF
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 849
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 295/550 (53%), Gaps = 5/550 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
+N +L L++ + L + KE+H + + F T +V +YA ++ A +FD
Sbjct: 176 YNFTYL-LKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFD 234
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R + WN+II YA A L + +PD+ T I A ++ L
Sbjct: 235 RMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRI 294
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R +HG ++ +G S+ALV YSK + A +FD ++ +V NSMI G+
Sbjct: 295 GRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQ 354
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++++F M+ T++G + + + G+ +H + S V
Sbjct: 355 NGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSV 414
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+SMY++C ++ A +F +L H LV+W+A+I GY+Q G +A+ YF K+ +Q
Sbjct: 415 MNSLISMYSKCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNI 474
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D + SV+ A A+ + + IHG VI+ + +V V++ALVDMY+KCG + +
Sbjct: 475 KPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARK 534
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ M ER++ T+N++I G G HG A E F + ++ + P+E TF +L AC H GL
Sbjct: 535 LFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGL 594
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GA 480
V +G + F M ++YG++ +HY MV LLG A L EA+ FI + P++PA+S GA
Sbjct: 595 VEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKM--PIEPAISVFGA 652
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
+L C I+ N +L E A+++F+ DP G Y V+L+N YA WD V ++R + G+
Sbjct: 653 MLGACRIHKNVELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGI 712
Query: 541 RKEAGVSWVS 550
+K G S V
Sbjct: 713 QKTPGWSVVE 722
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 221/412 (53%), Gaps = 9/412 (2%)
Query: 8 LVLELSKSHQSLSRTKELH---ALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
++LEL S KELH L+ K L + + TKLV L+ L A +F
Sbjct: 82 ILLELCTS------MKELHQFIPLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPI 135
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
+ L++++++ YA +DA S F + ++P + + + + C +N+DL +
Sbjct: 136 EDKIDELYHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGK 195
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H IV+G + + +V Y+K L++EA K+FD + + DLV N++ISG+A G
Sbjct: 196 EIHCQLIVNGFASNVFAMTGVVNMYAKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNG 255
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
F +L+L M GK PD T+V ++ + + L +G+ IHG+ +++ F+S+ VS+
Sbjct: 256 FGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGFESFVNVST 315
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
LV MY++C + +A +F+ + +V+W+++I GY Q GD G A+ F+K+ + +
Sbjct: 316 ALVDMYSKCGSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEM 375
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
V + L A A +V G +H + Q V V ++L+ MYSKC + + ++F
Sbjct: 376 TNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYSKCKRVDIAAEIF 435
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
E + + ++++N++ILG +G +A ++F + + + PD T +++ A
Sbjct: 436 ENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPA 487
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 157/297 (52%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
I +GL + + + LV+ + K + EA +VF + D L ++M+ G+A D ++
Sbjct: 101 IKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAV 160
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
F M G P Y L+ + + L G+ IH + + F S + + +V+MY
Sbjct: 161 SFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMY 220
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + AY +F+ + DLV W+ +I+GY+Q G AL ++ +GK+ D + I
Sbjct: 221 AKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIV 280
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A A ++ G IHGY ++ GFE V VS+ALVDMYSKCG +G +F+ M+ +
Sbjct: 281 SILPAVADVGSLRIGRSIHGYSMRAGFESFVNVSTALVDMYSKCGSVGTARLIFDRMTGK 340
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
++++NS+I G +G A E F+ ++++ + T L AC G V GR
Sbjct: 341 TVVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGR 397
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 95/198 (47%)
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
+K+ S + LVS++ + ++ A VF + + ++ GY++ A+
Sbjct: 101 IKNGLYSEHLFQTKLVSLFCKFGSLHEAARVFQPIEDKIDELYHTMLKGYARNSSLDDAV 160
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
+F ++ G + +L +A++ G IH +I +GF +V + +V+MY
Sbjct: 161 SFFCRMRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMY 220
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+KC + ++F+ M ER+++ +N++I G +GF A E + E+G PD T
Sbjct: 221 AKCRLVEEAYKMFDRMPERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIV 280
Query: 412 ALLCACCHGGLVNDGREI 429
++L A G + GR I
Sbjct: 281 SILPAVADVGSLRIGRSI 298
>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 703
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 283/546 (51%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
++ VL+ + L K++H + K+ + ++ L+ +Y L AR +FD
Sbjct: 30 MYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNNLLHVYIECGRLQEARCVFDAL 89
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
++S WN++I Y DA LF+ + ++P+ TY I +AC+ S L +
Sbjct: 90 VKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPNAGTYMIILKACASLSALKWGK 149
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH GL D +AL+ Y K I+EA ++FD + + D++ MI +A G
Sbjct: 150 EVHACIRHGGLESDVRVGTALLRMYGKCGSINEARRIFDNLMNHDIISWTVMIGAYAQSG 209
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++ +L M + G P+ T V +++ L + +H L + + V +
Sbjct: 210 NGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGALKWVKRVHRHALDAGLELDVRVGT 269
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
LV MYA+ ++ A VF+ + D+V+W+ +I +++ G +A F ++ +G K
Sbjct: 270 ALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGAFAEHGRGHEAYDLFLQMQTEGCKP 329
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D ++ S+L A A + + IH + + G E+ V V +ALV MYSK G + VF
Sbjct: 330 DAIMFLSILNACASAGALEWVKKIHRHALDSGLEVDVRVGTALVHMYSKSGSIDDARVVF 389
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ M RN++++N++I GL HG A E FR + G+ PD TF A+L AC H GLV+
Sbjct: 390 DRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMTAHGVKPDRVTFVAVLSACSHAGLVD 449
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+GR + MT+ YGI+ H MV LLG AG L EA FI ++ D A GALL
Sbjct: 450 EGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRLMEAKLFIDNMAVDPDEATWGALLGS 509
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C YGN +L E+VA + + DP+ A V+LSN YAE G+WD V +R + + G+RKE
Sbjct: 510 CRTYGNVELGELVAKERLKLDPKNAATYVLLSNIYAEAGKWDMVSWVRTMMRERGIRKEP 569
Query: 545 GVSWVS 550
G SW+
Sbjct: 570 GRSWIE 575
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 186/381 (48%), Gaps = 1/381 (0%)
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
A+ ++A + N L+ L D+F Y + + C + DL + VH I S + +++
Sbjct: 6 ANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHV 65
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L+ Y + + EA VFD + N+MI+G+ + +++LF M G
Sbjct: 66 MNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGV 125
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ T + ++ S L G+ +H +S V + L+ MY +C +N A
Sbjct: 126 QPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSINEARR 185
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F++L + D+++W+ +I Y+Q G+ +A ++ +G K + + S+L A A
Sbjct: 186 IFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEGA 245
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ +H + + G EL V V +ALV MY+K G + VF+ M R+++++N +I
Sbjct: 246 LKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIGA 305
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG ++A++ F + +G PD F ++L AC G + ++I R + G++
Sbjct: 306 FAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIH-RHALDSGLEV 364
Query: 442 KTEHYIYMVKLLGLAGNLEEA 462
+V + +G++++A
Sbjct: 365 DVRVGTALVHMYSKSGSIDDA 385
>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 908
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 181/542 (33%), Positives = 291/542 (53%), Gaps = 3/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + + K +H V K + L+ Y + SA LFD+ +
Sbjct: 201 VLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPD 260
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS+I + + +F +L ++ D T + AC+ +L R +HG
Sbjct: 261 VVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHG 320
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + + + S+ L+ YSK ++ A +VF + D +V S+I+ + G +
Sbjct: 321 FGVKACFSEEVVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSD 380
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ LFD M G PD YT+ ++ S L G+ +H + +K+ S V++ L++
Sbjct: 381 AIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALIN 440
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MYA+C + A VF+ + D+V+W+ +I GYSQ +AL F L+MQ + K D +
Sbjct: 441 MYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELF--LDMQKQFKPDDI 498
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A VL A A A + G IHG++++ G+ + V+ ALVDMY+KCG L L +F+ +
Sbjct: 499 TMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMI 558
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
++++I++ +I G G+HGF +A F ++ G+ PDES+FSA+L AC H GL+N+G
Sbjct: 559 PKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHSGLLNEGW 618
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
+ F M E G++ K EHY +V LL GNL +AY FI S+P D + G LLS C I
Sbjct: 619 KFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRI 678
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + LAE VA +FE +P Y V+L+N YAE +W++V KLR + G ++ G S
Sbjct: 679 HHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCS 738
Query: 548 WV 549
W+
Sbjct: 739 WI 740
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 230/427 (53%), Gaps = 1/427 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
N + VL+L +SL K +H+++ + D KLV +Y L R +FD
Sbjct: 94 LNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYVNCGDLVQGRKIFD 153
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
K VFLWN ++ YA F ++ SLFK + + + + +T+ C+ + + +
Sbjct: 154 KIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 213
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ VHG + G G ++ ++L+ AY K ++ A +FD +S+PD+V NSMI+G
Sbjct: 214 CKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVV 273
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
GF L++F ML LG D TLV ++ LS+G+ +HGF +K+ F
Sbjct: 274 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVF 333
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
S+ L+ MY++C +N A VF + +V+W+++I Y ++G Y A+ F ++ +G
Sbjct: 334 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGV 393
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D + S++ A A S+++ G +H YVI++G ++ V++AL++MY+KCG +
Sbjct: 394 RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARL 453
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF + ++I+++N++I G + +A E F D ++K PD+ T + +L AC
Sbjct: 454 VFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLD-MQKQFKPDDITMACVLPACAGLAA 512
Query: 423 VNDGREI 429
++ GREI
Sbjct: 513 LDKGREI 519
>gi|225447243|ref|XP_002272819.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Vitis vinifera]
Length = 633
Score = 309 bits (792), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 282/533 (52%), Gaps = 6/533 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++HA V K+ L D F L+ LY L P R +FD + V W S+I Y
Sbjct: 80 QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRV 139
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ ++ LF +L ++P+ FT + + +ACSE DL R HG + G + + +
Sbjct: 140 GKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIA 199
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGK 201
SAL+ + + +D+A ++FD + +PD + S+IS F+D++L+ F M R G
Sbjct: 200 SALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGM 259
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD +T +++ L G+ +H + + F V S LV MY +C + +
Sbjct: 260 CPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQR 319
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+ + + V+WSAL+ GY Q GD+ + FRK+ +K D ++L A A
Sbjct: 320 IFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAA 375
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G +H I+ G V+V SALVD+Y+KCG + +F+ M RN+IT+NS+I G
Sbjct: 376 VRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGG 435
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G +A F ++++G+ PD +F +L AC H GLV++GRE F MT++YGI+
Sbjct: 436 FAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKV 495
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY MV LLG AG LEEA I + D ++ ALL C N ++AE +A ++
Sbjct: 496 GIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRV 555
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
E +P V+L+N Y GRW+D +++R + D G+ K G SW+ +N
Sbjct: 556 MELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNN 608
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 14/275 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + KE+HA V + + LV +Y + ++ +FD+ P ++ W++++
Sbjct: 279 LKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGG 338
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y F +F+ + + L + + I R C+ + + + VH I G RD
Sbjct: 339 YCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRD 394
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
I SALV Y+K I+ A +FD + +L+ NSMI GFA G +++L++F+ M++
Sbjct: 395 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 454
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYARC 253
G PD + +G++ L+ G+ + +K + Y S +V + R
Sbjct: 455 EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHY----SCMVDLLGRA 510
Query: 254 NCMNSAYHVF-NSLFHPDLVTWSALITGYSQQGDY 287
+ A + S F D W+AL+ + +Y
Sbjct: 511 GLLEEAEILIETSDFRDDSSLWAALLGACTTCTNY 545
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G+ AL + ++ A PVL AS+L K G IH +VI+ G E
Sbjct: 36 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 95
Query: 343 VSSALVDMYSKCGY-LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V ++L+ +Y K G +VF+ + +++I++ S+I G G + E F ++
Sbjct: 96 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 155
Query: 402 GLNPDESTFSALLCACCHGGLVNDGR 427
G+ P+ T SA++ AC G + GR
Sbjct: 156 GVEPNAFTLSAVIKACSELGDLKLGR 181
>gi|147771902|emb|CAN75707.1| hypothetical protein VITISV_031420 [Vitis vinifera]
Length = 708
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 179/533 (33%), Positives = 282/533 (52%), Gaps = 6/533 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++HA V K+ L D F L+ LY L P R +FD + V W S+I Y
Sbjct: 139 QIHAHVIKSGLEFDRFVGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRV 198
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ ++ LF +L ++P+ FT + + +ACSE DL R HG + G + + +
Sbjct: 199 GKPMNSLELFWKMLAYGVEPNAFTLSAVIKACSELGDLKLGRIFHGVVLGRGFDSNYVIA 258
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGK 201
SAL+ + + +D+A ++FD + +PD + S+IS F+D++L+ F M R G
Sbjct: 259 SALIDMHGRNCALDDARQLFDELLEPDAICWTSIISALTRNDFFDEALRFFYSMQRDHGM 318
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD +T +++ L G+ +H + + F V S LV MY +C + +
Sbjct: 319 CPDGFTFGTVLTACGNLGRLKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQR 378
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+ + + V+WSAL+ GY Q GD+ + FRK+ +K D ++L A A
Sbjct: 379 IFDRMPIKNSVSWSALLGGYCQNGDFKSVIQIFRKM----EKVDLYCFGTILRTCAGLAA 434
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G +H I+ G V+V SALVD+Y+KCG + +F+ M RN+IT+NS+I G
Sbjct: 435 VRQGKEVHCQYIRKGGWRDVIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGG 494
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G +A F ++++G+ PD +F +L AC H GLV++GRE F MT++YGI+
Sbjct: 495 FAQNGRGEEALRIFNQMVKEGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKV 554
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY MV LLG AG LEEA I + D ++ ALL C N ++AE +A ++
Sbjct: 555 GIEHYSCMVDLLGRAGLLEEAEILIETSDFRDDSSLWAALLGACTTCTNYEIAERIAKRV 614
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
E +P V+L+N Y GRW+D +++R + D G+ K G SW+ +N
Sbjct: 615 MELEPDYHLSYVLLANVYKAVGRWNDALRIRRLMKDRGVNKMPGKSWIETKNN 667
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 14/275 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + KE+HA V + + LV +Y + ++ +FD+ P ++ W++++
Sbjct: 338 LKQGKEVHAKVITTGFCGNVVVESSLVDMYGKCGSVGESQRIFDRMPIKNSVSWSALLGG 397
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y F +F+ + + L + + I R C+ + + + VH I G RD
Sbjct: 398 YCQNGDFKSVIQIFRKMEKVDL----YCFGTILRTCAGLAAVRQGKEVHCQYIRKGGWRD 453
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
I SALV Y+K I+ A +FD + +L+ NSMI GFA G +++L++F+ M++
Sbjct: 454 VIVESALVDLYAKCGCIEYAQTIFDQMPVRNLITWNSMIGGFAQNGRGEEALRIFNQMVK 513
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYARC 253
G PD + +G++ L+ G+ + +K + Y S +V + R
Sbjct: 514 EGIKPDYISFIGILFACSHRGLVDEGREYFISMTKDYGIKVGIEHY----SCMVDLLGRA 569
Query: 254 NCMNSAYHVF-NSLFHPDLVTWSALITGYSQQGDY 287
+ A + S F D W+AL+ + +Y
Sbjct: 570 GLLEEAEILIETSDFRDDSSLWAALLGACTTCTNY 604
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G+ AL + ++ A PVL AS+L K G IH +VI+ G E
Sbjct: 95 KSGELSGALQLLKSIDPGEISAKPVLYASLLQTCTKVLAFNHGLQIHAHVIKSGLEFDRF 154
Query: 343 VSSALVDMYSKCGY-LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V ++L+ +Y K G +VF+ + +++I++ S+I G G + E F ++
Sbjct: 155 VGNSLLTLYFKLGTDFPETRKVFDGLFVKDVISWTSMISGYVRVGKPMNSLELFWKMLAY 214
Query: 402 GLNPDESTFSALLCACCHGGLVNDGR 427
G+ P+ T SA++ AC G + GR
Sbjct: 215 GVEPNAFTLSAVIKACSELGDLKLGR 240
>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
Length = 850
Score = 308 bits (790), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 189/569 (33%), Positives = 310/569 (54%), Gaps = 40/569 (7%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNN--VLPSARILFDKTPQRSVFLWNSI 75
S + K++HA + + + L DP+ A++L A ++ L AR +FD+ PQ +++ WN +
Sbjct: 151 SFKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSFSALDYARKVFDQIPQPNLYSWNIL 210
Query: 76 IRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
IRA A + + +F +L + P+ FT+ + +A +E + VHG AI +
Sbjct: 211 IRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTS 270
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQL 192
G D ++L+ Y+ +D A VF+ + ++ D+V NSM++GF G+ DK+L L
Sbjct: 271 FGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDL 330
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC--------------------- 231
F+ M G P+ T+V ++S + L++G+ + +
Sbjct: 331 FERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVK 390
Query: 232 ---------LKSSFDSYDYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
L + + D VS + ++ YA+ + A +F+S+ D+ W+ LI+GY
Sbjct: 391 CGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGY 450
Query: 282 SQQGDYGKALYYFRKLNM--QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
Q G +AL FR+L + G + D V + S L+A A+ + G IHGY+ + +L
Sbjct: 451 EQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQL 510
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ ++++L+DMYSK G + I+VF ++ +++ ++++I GL +HG A E F D+
Sbjct: 511 NRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGRGEAAIELFLDMQ 570
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
E + P+ TF+ LLCAC H GLV++G+ +F M YG+ KT+HY MV +LG AG+L
Sbjct: 571 ETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHL 630
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP-RKGAYKVMLSNT 518
EEA FI +P +V GALL C I+GN +LAE +L E +P GAY V+LSN
Sbjct: 631 EEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKACSRLLEIEPGNHGAY-VLLSNL 689
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
YA+ G W+ V +LR + D+GL+KE G S
Sbjct: 690 YAKTGDWEGVSELRQQMRDSGLKKETGCS 718
>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/553 (32%), Positives = 302/553 (54%), Gaps = 7/553 (1%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
+ +N +L L++ + L R KE+H + S + F T +V +YA + A +
Sbjct: 146 VVYNFTYL-LKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKM 204
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ---LKPDNFTYACITRACSEN 117
FD+ P+R + WN+II ++ + AK + +LR Q +PD+ T + A ++
Sbjct: 205 FDRMPERDLVSWNTIIAGFS---QNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADV 261
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
L + +HG AI +G + S+AL YSK ++ A +FDG+ +V NSM+
Sbjct: 262 GLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQKTVVSWNSMM 321
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G+ G +K++ +F+ ML G P T++ + + L G+ +H F + +
Sbjct: 322 DGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLG 381
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
S V + L+SMY++C ++ A +FN+L V+W+A+I GY+Q G +AL F ++
Sbjct: 382 SDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEM 441
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G K D + SV+ A A+ + IHG +I+ + ++ V++ALVDMYSKCG +
Sbjct: 442 KSLGMKPDSFTMVSVIPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAI 501
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ ++F+ +S+R++IT+N++I G G HG A + F + + + P++ T+ +++ AC
Sbjct: 502 HMARKLFDMISDRHVITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISAC 561
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H GLV++G F M ++YG++ +HY MV LLG AG ++EA+ FI ++P V
Sbjct: 562 SHSGLVDEGLRHFKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITV 621
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
GA C I+ N ++ E A +LFE +P +G Y V+L+N YA +W V ++R +
Sbjct: 622 YGAXXGACKIHKNIEVGEKAAKKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEK 681
Query: 538 NGLRKEAGVSWVS 550
GL+K G S V
Sbjct: 682 KGLKKTPGCSVVE 694
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 112/397 (28%), Positives = 206/397 (51%), Gaps = 3/397 (0%)
Query: 23 KELH---ALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
KELH LV K L + + TKLV L++ + A +F+ + L++++++ Y
Sbjct: 63 KELHQIIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGY 122
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A A + + +KP + + + + C +N+DL + +HG I + +
Sbjct: 123 AKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANV 182
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ +V Y+K ID+A K+FD + + DLV N++I+GF+ GF K+L+L M
Sbjct: 183 FAMTGVVNMYAKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDE 242
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G+ PD TLV ++ + LL VG+ IHG+ +++ F +S+ L MY++C + +A
Sbjct: 243 GQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETA 302
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F+ + +V+W++++ GY Q G+ KA+ F K+ +G V I L A A
Sbjct: 303 RLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADL 362
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++ G +H +V Q + V ++L+ MYSKC + + +F ++ R +++N++I
Sbjct: 363 GDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDIASDIFNNLNGRTHVSWNAMI 422
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
LG +G +A F ++ G+ PD T +++ A
Sbjct: 423 LGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPA 459
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 161/297 (54%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
I +GL + + + LV+ +SK I+EA +VF+ + D L ++M+ G+A + +L
Sbjct: 73 IKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETAL 132
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
M P Y L+ + + L G+ IHG + +SF + + + +V+MY
Sbjct: 133 AFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMY 192
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C ++ AY +F+ + DLV+W+ +I G+SQ G KAL ++ +G++ D + +
Sbjct: 193 AKCRQIDDAYKMFDRMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLV 252
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+VL AAA + G IHGY I+ GF V +S+AL DMYSKCG + +F+ M ++
Sbjct: 253 TVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNISTALADMYSKCGSVETARLIFDGMDQK 312
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
++++NS++ G +G +A F ++E+G++P T L AC G + G+
Sbjct: 313 TVVSWNSMMDGYVQNGEPEKAIAVFEKMLEEGIDPTGVTIMEALHACADLGDLERGK 369
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 11/219 (5%)
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LVS++++ +N A VF + + ++ GY++ AL + ++ K
Sbjct: 87 LVSLFSKYGSINEAARVFEPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPV 146
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+L +A++ G IHG +I + F +V + +V+MY+KC + ++F+
Sbjct: 147 VYNFTYLLKVCGDNADLKRGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFD 206
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M ER+++++N++I G +GF +A E + ++G PD T +L A GL+
Sbjct: 207 RMPERDLVSWNTIIAGFSQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMV 266
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
G+ I Y I+A KL+ ++ L + YS
Sbjct: 267 GKSI-----HGYAIRAG------FAKLVNISTALADMYS 294
>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
Length = 906
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 284/532 (53%), Gaps = 2/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+R +E+H V + D L+ +Y + SAR++FD+ P+R WN++I
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + LF + + PD T + AC D R VHG I +G +
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+++L+ +S + DEA VF + DLV +MISG+ G +K+++ + M
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PDE T+ ++S LL G +H F ++ SY V++ L+ MY++C C++
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK 450
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + + ++++W+++I G +AL++F+++ + K + V + SVL+A A+
Sbjct: 451 ALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACAR 509
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH + ++ G + +AL+DMY +CG + F + E+++ ++N +
Sbjct: 510 IGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNIL 568
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G G A E F +IE +NPDE TF++LLCAC G+V DG E F M ++
Sbjct: 569 LTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFH 628
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I +HY +V LLG AG LE+AY FI +P DPA+ GALL+ C IY N +L E+ A
Sbjct: 629 IAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAA 688
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+FE D + Y ++L N YA+ G+WD+V ++R + +N L + G SWV
Sbjct: 689 QHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVE 740
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 221/421 (52%), Gaps = 1/421 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L + ++ S +H+ V+K L+ ++ L A +F K +R
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+F WN ++ YA A F++A +L+ +L ++PD +T+ C+ R C DL R VH
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G D +AL+T Y K I A VFD + D + N+MISG+ +
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+LF M PD T+ +IS +G+ +HG+ +K+ F + V++ L+
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
M++ C + A VF+ + DLV+W+A+I+GY + G KA+ + + +G D +
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
IASVL+A A + G ++H + + G V+V+++L+DMYSKC + ++VF +
Sbjct: 400 IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+N+I++ S+ILGL L+ +++A FF+ +I L P+ T ++L AC G ++ G+E
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKE 518
Query: 429 I 429
I
Sbjct: 519 I 519
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
NS+I G +K+L D M L + +E T + L+ S G +H + K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ + + L+SM+ R + A++VF + DL +W+ L+ GY++ G + +AL
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
+ ++ G + D VL ++ G +H +VI++GFE V V +AL+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + VF+ M R+ I++N++I G + + F + E ++PD T +++
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 414 LCACCHGGLVNDGREI 429
+ AC G GRE+
Sbjct: 303 ISACEALGDERLGREV 318
>gi|356536685|ref|XP_003536866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Glycine max]
Length = 723
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 177/568 (31%), Positives = 296/568 (52%), Gaps = 35/568 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SLS+ K+LHA V L ++P ++LV Y N+L A+ + + + WN +I
Sbjct: 95 KSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLHWNLLI 154
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
AY F +A ++KN+L +++PD +TY + +AC E+ D VH S +
Sbjct: 155 SAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIEASSME 214
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ALV+ Y + ++ A +FD + D V N++IS +A G W ++ QLF M
Sbjct: 215 WSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQLFGSM 274
Query: 197 LRLG-------------------------------KTPDEYTLVGLISGLWEPS---LLS 222
G +T + ++ GL S +
Sbjct: 275 QEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSHIGAIK 334
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G+ IHG +++ FD +D V + L++MY+RC + A+ +F+ L+TW+A+++GY+
Sbjct: 335 LGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAMLSGYA 394
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSV 341
Y + + FR++ +G + + V IASVL A+ AN+ G H Y+++H FE +
Sbjct: 395 HMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHKQFEEYL 454
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
++ +ALVDMYS+ G + +VF+++++R+ +TY S+ILG G+ G + F ++ +
Sbjct: 455 LLWNALVDMYSRSGRVLEARKVFDSLTKRDEVTYTSMILGYGMKGEGETTLKLFEEMCKL 514
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
+ PD T A+L AC H GLV G+ +F RM + +GI + EHY M L G AG L +
Sbjct: 515 EIKPDHVTMVAVLTACSHSGLVAQGQVLFKRMIDVHGIVPRLEHYACMADLFGRAGLLNK 574
Query: 462 AYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAE 521
A FI +P A+ LL C I+GN+++ E A +L E P Y V+++N YA
Sbjct: 575 AKEFITGMPYKPTSAMWATLLGACRIHGNTEMGEWAAGKLLEMKPDHSGYYVLIANMYAA 634
Query: 522 DGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
G W + ++R + + G+RK G +WV
Sbjct: 635 AGSWRKLAEVRTYMRNLGVRKAPGCAWV 662
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 179/394 (45%), Gaps = 36/394 (9%)
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
AC+ L + +H I GL ++ I S LV Y+ ++L+ +A V + + D +
Sbjct: 90 ACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSNTLDPLH 149
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N +IS + GF+ ++L ++ ML PDEYT ++ E + G +H
Sbjct: 150 WNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLEVHRSIE 209
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
SS + +V + LVSMY R + A H+F+++ D V+W+ +I+ Y+ +G + +A
Sbjct: 210 ASSMEWSLFVHNALVSMYGRFGKLEIARHLFDNMPRRDSVSWNTIISCYASRGIWKEAFQ 269
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSAN------------------------------- 321
F + +G + + ++ ++ S N
Sbjct: 270 LFGSMQEEGVEMNVIIWNTIAGGCLHSGNFRGALQLISQMRTSIHLDAIAMVVGLNACSH 329
Query: 322 ---VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IHG+ ++ F++ V +AL+ MYS+C LG +F E+ +IT+N++
Sbjct: 330 IGAIKLGKEIHGHAVRTCFDVFDNVKNALITMYSRCRDLGHAFILFHRTEEKGLITWNAM 389
Query: 379 ILGLGLHGFTYQAFEF-FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+ G H Y+ F FR+++++G+ P+ T +++L C + G+E + +
Sbjct: 390 LSGYA-HMDRYEEVTFLFREMLQEGMEPNYVTIASVLPLCARIANLQHGKEFHCYIMKHK 448
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ + +V + +G + EA SL K
Sbjct: 449 QFEEYLLLWNALVDMYSRSGRVLEARKVFDSLTK 482
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 40/235 (17%)
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I S+L A ++ G +H VI G + + ++ S LV+ Y+ L V E+ +
Sbjct: 84 IGSLLLACTHFKSLSQGKQLHAQVISLGLDQNPILVSRLVNFYTNVNLLVDAQFVTESSN 143
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ + +N +I +GF +A +++++ K + PDE T+ ++L AC N G E
Sbjct: 144 TLDPLHWNLLISAYVRNGFFVEALCVYKNMLNKKIEPDEYTYPSVLKACGESLDFNSGLE 203
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
+ + EA S WSL V AL+S +Y
Sbjct: 204 VHRSI---------------------------EASSMEWSL------FVHNALVS---MY 227
Query: 489 GNSDLAEIVAHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
G EI H LF+N PR+ ++ ++S YA G W + +L + + G+
Sbjct: 228 GRFGKLEIARH-LFDNMPRRDSVSWNTIIS-CYASRGIWKEAFQLFGSMQEEGVE 280
>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Vitis vinifera]
Length = 872
Score = 308 bits (790), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 173/532 (32%), Positives = 284/532 (53%), Gaps = 2/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+R +E+H V + D L+ +Y + SAR++FD+ P+R WN++I
Sbjct: 211 LARGREVHLHVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISG 270
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + LF + + PD T + AC D R VHG I +G +
Sbjct: 271 YFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAE 330
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+++L+ +S + DEA VF + DLV +MISG+ G +K+++ + M
Sbjct: 331 VSVNNSLIQMHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEH 390
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PDE T+ ++S LL G +H F ++ SY V++ L+ MY++C C++
Sbjct: 391 EGVVPDEITIASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDK 450
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + + ++++W+++I G +AL++F+++ + K + V + SVL+A A+
Sbjct: 451 ALEVFHRIPNKNVISWTSIILGLRLNYRSFEALFFFQQM-ILSLKPNSVTLVSVLSACAR 509
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH + ++ G + +AL+DMY +CG + F + E+++ ++N +
Sbjct: 510 IGALSCGKEIHAHALRTGLGFDGFLPNALLDMYVRCGRMEPAWNQFNS-CEKDVASWNIL 568
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G G A E F +IE +NPDE TF++LLCAC G+V DG E F M ++
Sbjct: 569 LTGYAQQGKGGLAVELFHKMIESDVNPDEITFTSLLCACSRSGMVTDGLEYFESMEHKFH 628
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I +HY +V LLG AG LE+AY FI +P DPA+ GALL+ C IY N +L E+ A
Sbjct: 629 IAPNLKHYASVVDLLGRAGRLEDAYEFIKKMPIDPDPAIWGALLNACRIYQNVELGELAA 688
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+FE D + Y ++L N YA+ G+WD+V ++R + +N L + G SWV
Sbjct: 689 QHIFEMDTKSVGYYILLCNLYADSGKWDEVARVRKIMRENRLTVDPGCSWVE 740
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 129/421 (30%), Positives = 221/421 (52%), Gaps = 1/421 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L + ++ S +H+ V+K L+ ++ L A +F K +R
Sbjct: 100 LLRLCEWKRAASEGSRVHSYVSKTVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERD 159
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+F WN ++ YA A F++A +L+ +L ++PD +T+ C+ R C DL R VH
Sbjct: 160 LFSWNVLVGGYAKAGYFDEALNLYHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHL 219
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G D +AL+T Y K I A VFD + D + N+MISG+ +
Sbjct: 220 HVIRYGFESDVDVVNALITMYVKCGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLE 279
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+LF M PD T+ +IS +G+ +HG+ +K+ F + V++ L+
Sbjct: 280 GLRLFFMMREFFVDPDLMTMTSVISACEALGDERLGREVHGYVIKTGFVAEVSVNNSLIQ 339
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
M++ C + A VF+ + DLV+W+A+I+GY + G KA+ + + +G D +
Sbjct: 340 MHSSVGCWDEAEMVFSKMEFKDLVSWTAMISGYEKNGLPEKAVETYTIMEHEGVVPDEIT 399
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
IASVL+A A + G ++H + + G V+V+++L+DMYSKC + ++VF +
Sbjct: 400 IASVLSACAGLGLLDKGIMLHEFADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIP 459
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+N+I++ S+ILGL L+ +++A FF+ +I L P+ T ++L AC G ++ G+E
Sbjct: 460 NKNVISWTSIILGLRLNYRSFEALFFFQQMI-LSLKPNSVTLVSVLSACARIGALSCGKE 518
Query: 429 I 429
I
Sbjct: 519 I 519
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 125/256 (48%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
NS+I G +K+L D M L + +E T + L+ S G +H + K
Sbjct: 63 NSLILELCLKGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSK 122
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ + + L+SM+ R + A++VF + DL +W+ L+ GY++ G + +AL
Sbjct: 123 TVTRLGVRLGNALLSMFVRFGDLVEAWYVFGKMAERDLFSWNVLVGGYAKAGYFDEALNL 182
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
+ ++ G + D VL ++ G +H +VI++GFE V V +AL+ MY K
Sbjct: 183 YHRMLWVGIRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYGFESDVDVVNALITMYVK 242
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + VF+ M R+ I++N++I G + + F + E ++PD T +++
Sbjct: 243 CGDIFSARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSV 302
Query: 414 LCACCHGGLVNDGREI 429
+ AC G GRE+
Sbjct: 303 ISACEALGDERLGREV 318
>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Vitis vinifera]
Length = 1005
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 283/533 (53%), Gaps = 3/533 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + KE+H + + D AT L+ +YA A+ LF R + W++II A
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+A SLF+ + ++KP+ T I AC++ S L + +H + + + D
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
T +ALV+ Y+K A+ F+ +S D+V NS+I+G+A G ++ +F + LR
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF-YKLR 523
Query: 199 LGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
L PD T+VG++ + L G IHG +K F+S +V + L+ MYA+C +
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 258 SAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA +FN F D VTW+ +I Y Q G +A+ F ++ ++ + V SVL AA
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A G H +IQ GF + +V ++L+DMY+KCG L ++F M ++ +++N
Sbjct: 644 AYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWN 703
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+++ G +HG +A F + E + D +F ++L AC H GLV +GR+IF M+++
Sbjct: 704 AMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDK 763
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y I+ EHY MV LLG AG +E FI +P D V GALL C ++ N L E+
Sbjct: 764 YHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEV 823
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L + +PR A+ V+LS+ YA+ GRW D K R + D GL+K G SWV
Sbjct: 824 ALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWV 876
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 208/388 (53%), Gaps = 2/388 (0%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
T L+ LY+L + AR +FD TP S LWNS+IRAY + ++N+A ++ ++ L+
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD +T+ + +AC+ +L + HG GL RD + LV YSK+ + A +V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FD + D+V N+MI+G + +++ F M +G P +L+ L G+ + S +
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+ + IHG+ + F S VS+ L+ +Y++C ++ A VF+ + D V+W ++ GY
Sbjct: 247 ELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
+ G + + L F K+ + + + V S AAA++ ++ G IHG +Q + +
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+V++ L+ MY+KCG Q+F + R+++ ++++I L G+ +A F+++ +
Sbjct: 365 LVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREI 429
+ P+ T ++L AC L+ G+ I
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSI 452
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 193/384 (50%), Gaps = 1/384 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ LY+ + AR +FD+ + W +++ YA F + LF + ++ +
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
+ A +E DL + +HG A+ + D + ++ L+ Y+K ++A ++F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
G+ DLV +++I+ G+ +++L LF M P+ TL+ ++ + SLL +
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ IH F +K+ DS + LVSMYA+C +A FN + D+VTW++LI GY+Q
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
GD A+ F KL + D + V+ A A ++ G IHG +++ GFE V
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568
Query: 344 SSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+AL+DMY+KCG L +F +T ++ +T+N +I +G +A F + +
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628
Query: 403 LNPDESTFSALLCACCHGGLVNDG 426
+P+ TF ++L A + +G
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREG 652
>gi|449451649|ref|XP_004143574.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
gi|449516723|ref|XP_004165396.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Cucumis sativus]
Length = 651
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 286/550 (52%), Gaps = 5/550 (0%)
Query: 3 FNLHFLVLELSK-SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
F FL +K SH L+ ++ +H V K+ D + T +V +Y + A LF
Sbjct: 53 FTFPFLSKACAKLSH--LTNSQIIHTHVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLF 110
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
DK P R++ WN++I ++ + +LF + +PD T +TRA L
Sbjct: 111 DKMPVRNIASWNAMIIGFSQIGSLDRVFNLFMGMRLVGTRPDAATVIGLTRAVISAKSLR 170
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP--DLVLCNSMISG 179
L+ VH I +GL D+ S+ + AYSK + A VF G+ V NS+I+
Sbjct: 171 FLKAVHAIGIETGLDADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVSWNSLIAC 230
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+AH G + +++ + +L G PD T++ L+S +P L G IHG + DS
Sbjct: 231 YAHFGKYVDAVKSYKGLLCDGFKPDASTIISLLSSCQQPEALIYGFLIHGHGFQLGCDSD 290
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ + L+SMY+RC ++SA +F+ + V+W+A+I+GYS+ G AL F +
Sbjct: 291 ISLINTLISMYSRCGDISSATILFDGMSIRTCVSWTAMISGYSEVGRVDDALVLFNAMEE 350
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G+K D V + S+++ K+ + G I Y H + V+V +AL+DMY+KCG L
Sbjct: 351 TGEKPDIVTVLSLISGCGKTGALGLGHWIDNYASLHELKKDVVVCNALIDMYAKCGSLND 410
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++F ++ R ++++ ++I L+G +A + F + E G+ P+ TF A+L ACCH
Sbjct: 411 AREIFYSLPNRTVVSWTAMIAACALNGEFREALDLFSLLSESGIEPNNITFLAVLQACCH 470
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GG + GRE F MTE YGI +HY M+ LLG G L EA I +P D + G
Sbjct: 471 GGYLEKGRECFMMMTERYGINPGLDHYSCMIDLLGRKGKLIEALEVIQDMPMKPDEGIWG 530
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
ALL C I+ N ++ E V+ LFE PR V ++N YA GRWD+V +R + N
Sbjct: 531 ALLGACKIHNNMEIGEYVSRYLFELQPRVAVSFVEMANIYASVGRWDEVAAMRKTMRSNQ 590
Query: 540 LRKEAGVSWV 549
+RK G S V
Sbjct: 591 MRKSPGKSVV 600
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 195/415 (46%), Gaps = 3/415 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WNS IR + A +LF L L+P+NFT+ +++AC++ S L + +H +
Sbjct: 20 WNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHTHVV 79
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
S D +A+V Y K +D+A +FD + ++ N+MI GF+ G D+
Sbjct: 80 KSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDRVFN 139
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF M +G PD T++GL + L + +H +++ D+ VS+ ++ Y+
Sbjct: 140 LFMGMRLVGTRPDAATVIGLTRAVISAKSLRFLKAVHAIGIETGLDADTSVSNTWIAAYS 199
Query: 252 RCNCMNSAYHVFNSLFHP--DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
+C + A VF+ + V+W++LI Y+ G Y A+ ++ L G K D I
Sbjct: 200 KCGELQLAKMVFHGIQKTARSSVSWNSLIACYAHFGKYVDAVKSYKGLLCDGFKPDASTI 259
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
S+L++ + + G +IHG+ Q G + + + + L+ MYS+CG + +F+ MS
Sbjct: 260 ISLLSSCQQPEALIYGFLIHGHGFQLGCDSDISLINTLISMYSRCGDISSATILFDGMSI 319
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
R +++ ++I G G A F + E G PD T +L+ C G + G I
Sbjct: 320 RTCVSWTAMISGYSEVGRVDDALVLFNAMEETGEKPDIVTVLSLISGCGKTGALGLGHWI 379
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+ ++ ++ + G+L +A +SLP + + + +C
Sbjct: 380 -DNYASLHELKKDVVVCNALIDMYAKCGSLNDAREIFYSLPNRTVVSWTAMIAAC 433
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 122/274 (44%), Gaps = 34/274 (12%)
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
L W++ I G QG+ KAL F +L + G + + + A AK +++ +IH
Sbjct: 17 LTWWNSSIRGAVNQGNASKALALFHQLKLNGLQPNNFTFPFLSKACAKLSHLTNSQIIHT 76
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
+V++ F + V +A+VDMY KCG + +F+ M RNI ++N++I+G G +
Sbjct: 77 HVVKSPFYSDIYVQTAMVDMYVKCGKVDDAYNLFDKMPVRNIASWNAMIIGFSQIGSLDR 136
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
F F + G PD +T L TR I AK+ ++ V
Sbjct: 137 VFNLFMGMRLVGTRPDAATVIGL-----------------TRAV----ISAKSLRFLKAV 175
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
+G+ L+ D +VS ++ G LA++V H + + +
Sbjct: 176 HAIGIETGLD------------ADTSVSNTWIAAYSKCGELQLAKMVFHGIQKTARSSVS 223
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
+ +++ YA G++ D +K ++ +G + +A
Sbjct: 224 WNSLIA-CYAHFGKYVDAVKSYKGLLCDGFKPDA 256
>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Glycine max]
Length = 748
Score = 308 bits (788), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 192/618 (31%), Positives = 303/618 (49%), Gaps = 73/618 (11%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARI---LF 61
H L LS S SLS+ ++ HAL+ + +L D T L+ YA L + ++ L
Sbjct: 2 FHALSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLS 61
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
P ++F ++S+I A+A +H F + F +L +L PD F ++C+ L
Sbjct: 62 SHLPHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALD 121
Query: 122 GLRFVHGGAIVSGLGRDSITSS-------------------------------ALVTAYS 150
+ +H A SG DSI +S A++ YS
Sbjct: 122 PGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYS 181
Query: 151 KLSLIDEAIKVF----DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEY 206
+L L++EA ++F G +P+LV N M++GF + GF+D+++ +F ML G PD
Sbjct: 182 RLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGS 241
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM---------- 256
T+ ++ + + VG +HG+ +K S +V S ++ MY +C C+
Sbjct: 242 TVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEV 301
Query: 257 ---------------------NSAYHVFNSL----FHPDLVTWSALITGYSQQGDYGKAL 291
++A VFN ++VTW+++I SQ G +AL
Sbjct: 302 EEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEAL 361
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
FR + G + + V I S++ A + + G IH + ++ G V V SAL+DMY
Sbjct: 362 ELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMY 421
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+KCG + L + F+ MS N++++N+V+ G +HG + E F +++ G PD TF+
Sbjct: 422 AKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFT 481
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+L AC GL +G + M+EE+GI+ K EHY +V LL G LEEAYS I +P
Sbjct: 482 CVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPF 541
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
D V GALLS C ++ N L EI A +LF +P ++LSN YA G WD+ ++
Sbjct: 542 EPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLEPTNPGNYILLSNIYASKGLWDEENRI 601
Query: 532 RDDIVDNGLRKEAGVSWV 549
R+ + GLRK G SW+
Sbjct: 602 REVMKSKGLRKNPGYSWI 619
>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
Length = 787
Score = 307 bits (787), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 176/526 (33%), Positives = 288/526 (54%), Gaps = 4/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHAL A D F A+ L +LY + + + AR +FD P LWN+++ + +
Sbjct: 136 LHALAVAAGYAADTFVASALAKLYFVLSRVDHARKVFDTVPSPDTVLWNTLLAGLSGS-- 193
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+S + + ++PD T A + A +E +D+ R VH A GL +
Sbjct: 194 -EAVESFARMVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTG 252
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ YSK ++ A +FD + PDLV N++ISG++ G S+ LF ++ LG P+
Sbjct: 253 LISLYSKCGDVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPN 312
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TLV LI + Q +HGF LKS F + VS+ + +++ R N M SA F+
Sbjct: 313 SSTLVALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFD 372
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
++ + +W+A+I+GY+Q G A+ F ++ + +P+ I+S L+A A+ +
Sbjct: 373 TMPEKTMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSL 432
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H + + E +V V +AL+DMY+KCG + ++F TM +N++++N++I G GL
Sbjct: 433 GKWLHRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGL 492
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + ++D+++ L P +TF ++L AC HGGLV +G ++F MT++Y I E
Sbjct: 493 HGQGAEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIE 552
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPK-PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
H MV LLG AG L+EA+ I PK V P V GALL C ++ +SDLA++ + +LFE
Sbjct: 553 HCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFE 612
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP Y V+LSN + ++ + +R + L K G + +
Sbjct: 613 LDPENSGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLI 658
>gi|357437223|ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 697
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 173/527 (32%), Positives = 278/527 (52%), Gaps = 1/527 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + K L+ D + LV +YA N A LFD+ P + V WN++I Y + +
Sbjct: 128 IHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGK 187
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F +A F + R +PD+ T +C+ DL R +H + SG DS S+A
Sbjct: 188 FEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAA 247
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y K ++ AI+VF+ + + +V NSMI+G+ G +QLF M G P
Sbjct: 248 LVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPT 307
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TL + + + L G+ +HG+ +++ +++S L+ +Y +C + SA +F
Sbjct: 308 LTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFK 367
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ V+W+ +I+GY +G AL F +++ + D + SVLAA ++ A +
Sbjct: 368 LMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEK 427
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH +++ + +V AL+DMY+KCG + VF+ + ER+++++ S+I G
Sbjct: 428 GREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGS 487
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG Y+A E F ++++ + PD TF A+L AC H GLV+DG F +M YGI + E
Sbjct: 488 HGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIE 547
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVAHQLFE 503
HY ++ LLG AG L EAY + S P+ D + L S C ++ N DL +A L +
Sbjct: 548 HYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLSTLFSACRLHKNLDLGVEIAENLID 607
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
DP + ++LSN YA G+WD+V +R + D GL+K G SW+
Sbjct: 608 KDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGLKKNPGCSWIE 654
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/468 (28%), Positives = 233/468 (49%), Gaps = 9/468 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR- 67
+L S + +SL + K LH V L D + L+ LY N+ A+ +FD
Sbjct: 9 LLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDVIENPF 68
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRFV 126
+ L N ++ Y +++A LF L+ LKPD++TY + +AC + + +
Sbjct: 69 EISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMI 128
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + GL D + S+LV Y+K + + A+K+FD + D D+ N++IS + G +
Sbjct: 129 HTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKF 188
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+++L+ F M R G PD T+ IS L G+ IH + S F +VS+ L
Sbjct: 189 EEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAAL 248
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MY +C + A VF + + +V W+++I GY +GD + F+++ +G K
Sbjct: 249 VDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTL 308
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ S L A ++SA + G +HGY+I++ + + ++S+L+D+Y KCG + +F+
Sbjct: 309 TTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKL 368
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M + +++N +I G G + A F ++ + + PD TF+++L AC + G
Sbjct: 369 MPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKG 428
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGL---AGNLEEAYSFIWSLPK 471
REI + E + + + M LL + G +EEA+ LP+
Sbjct: 429 REIHNLIVE----RNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPE 472
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 182/399 (45%), Gaps = 5/399 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L R +E+H + + D F + LV +Y L A +F++ P ++V WNS+I
Sbjct: 223 LDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMPNKTVVAWNSMING 282
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y LFK + +KP T ACS+++ L +FVHG I + + D
Sbjct: 283 YGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPD 342
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+S+L+ Y K ++ A +F + V N MISG+ G +L+LF M +
Sbjct: 343 IFLNSSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSK 402
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
PD T +++ + + L G+ IH ++ + + + V L+ MYA+C +
Sbjct: 403 SFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEE 462
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ VF L DLV+W+++IT Y G +AL F ++ K D V ++L+A +
Sbjct: 463 AFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSH 522
Query: 319 SANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITY 375
+ V G +I +G + S L+ + + G L ++ ++ E +
Sbjct: 523 AGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLL 582
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+++ LH E ++I+K +PD+S+ +L
Sbjct: 583 STLFSACRLHKNLDLGVEIAENLIDK--DPDDSSTYIIL 619
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 123/269 (45%), Gaps = 3/269 (1%)
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D L+ L+ L G+ +H + + YV L+S+Y CN + A +VF
Sbjct: 2 DARKLIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVF 61
Query: 264 NSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNM-QGKKADPVLIASVLAAAAKSAN 321
+ + +P ++ + L+ GY++ Y +AL F KL K D SVL A
Sbjct: 62 DVIENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRR 121
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G +IH +++ G + ++V S+LV MY+KC +++F+ M ++++ +N+VI
Sbjct: 122 VVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCNEFECAVKLFDEMPDKDVACWNTVISC 181
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G +A +F + G PD T + + +C ++ GREI + G +
Sbjct: 182 YYQSGKFEEALRYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNS-GFRM 240
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+ +V + G G LE A +P
Sbjct: 241 DSFVSAALVDMYGKCGQLEMAIEVFEQMP 269
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L + +E+H L+ + +L + L+ +YA + A +F P+R
Sbjct: 415 VLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGVFKCLPERD 474
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ W S+I AY R +A LF +L++ +KPD T+ I ACS
Sbjct: 475 LVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACS 521
>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
Length = 1005
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 182/533 (34%), Positives = 283/533 (53%), Gaps = 3/533 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + KE+H + + D AT L+ +YA A+ LF R + W++II A
Sbjct: 345 LEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAA 404
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+A SLF+ + ++KP+ T I AC++ S L + +H + + + D
Sbjct: 405 LVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSD 464
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
T +ALV+ Y+K A+ F+ +S D+V NS+I+G+A G ++ +F + LR
Sbjct: 465 LSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMF-YKLR 523
Query: 199 LGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
L PD T+VG++ + L G IHG +K F+S +V + L+ MYA+C +
Sbjct: 524 LSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLP 583
Query: 258 SAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA +FN F D VTW+ +I Y Q G +A+ F ++ ++ + V SVL AA
Sbjct: 584 SAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAA 643
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A G H +IQ GF + +V ++L+DMY+KCG L ++F M ++ +++N
Sbjct: 644 AYLAAFREGMAFHACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWN 703
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+++ G +HG +A F + E + D +F ++L AC H GLV +GR+IF M+++
Sbjct: 704 AMLSGYAVHGHGDRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDK 763
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y I+ EHY MV LLG AG +E FI +P D V GALL C ++ N L E+
Sbjct: 764 YHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEV 823
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L + +PR A+ V+LS+ YA+ GRW D K R + D GL+K G SWV
Sbjct: 824 ALDHLVKLEPRNPAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWV 876
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 208/388 (53%), Gaps = 2/388 (0%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
T L+ LY+L + AR +FD TP S LWNS+IRAY + ++N+A ++ ++ L+
Sbjct: 67 THLINLYSLFHKCDLARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLE 126
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD +T+ + +AC+ +L + HG GL RD + LV YSK+ + A +V
Sbjct: 127 PDKYTFTFVLKACTGALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREV 186
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FD + D+V N+MI+G + +++ F M +G P +L+ L G+ + S +
Sbjct: 187 FDKMPKRDVVAWNAMIAGLSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI 246
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+ + IHG+ + F S VS+ L+ +Y++C ++ A VF+ + D V+W ++ GY
Sbjct: 247 ELCRSIHGYVFRRDFSS--AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGY 304
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
+ G + + L F K+ + + + V S AAA++ ++ G IHG +Q + +
Sbjct: 305 AHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDI 364
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+V++ L+ MY+KCG Q+F + R+++ ++++I L G+ +A F+++ +
Sbjct: 365 LVATPLMVMYAKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQ 424
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREI 429
+ P+ T ++L AC L+ G+ I
Sbjct: 425 KMKPNRVTLMSILPACADLSLLKLGKSI 452
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/384 (28%), Positives = 193/384 (50%), Gaps = 1/384 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ LY+ + AR +FD+ + W +++ YA F + LF + ++ +
Sbjct: 269 LIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLGNVRIN 328
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
+ A +E DL + +HG A+ + D + ++ L+ Y+K ++A ++F
Sbjct: 329 KVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKAKQLFW 388
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
G+ DLV +++I+ G+ +++L LF M P+ TL+ ++ + SLL +
Sbjct: 389 GLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADLSLLKL 448
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ IH F +K+ DS + LVSMYA+C +A FN + D+VTW++LI GY+Q
Sbjct: 449 GKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIVTWNSLINGYAQ 508
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
GD A+ F KL + D + V+ A A ++ G IHG +++ GFE V
Sbjct: 509 IGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGLIVKLGFESDCHV 568
Query: 344 SSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+AL+DMY+KCG L +F +T ++ +T+N +I +G +A F + +
Sbjct: 569 KNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKEAISSFHQMRLEN 628
Query: 403 LNPDESTFSALLCACCHGGLVNDG 426
+P+ TF ++L A + +G
Sbjct: 629 FHPNSVTFVSVLPAAAYLAAFREG 652
>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
Length = 645
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/547 (33%), Positives = 280/547 (51%), Gaps = 38/547 (6%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + +LE +SL+ K++H K + D KL RLY N + AR LFD+
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P SV LWN IIRAYA F+ A L+ ++L ++P+ +TY + +ACS +
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H A + GL D +ALV Y+K ++ EA ++F +S D+V N+MI+G +
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G D ++QL M G P+ T+VG++ P+
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVL-----PT------------------------ 219
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
C C+ A +F+ + + V+WSA+I GY +AL FR + + G
Sbjct: 220 ---------CQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLSGID 270
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D + VL A + A + G HGY+I GF ++ +AL+DMYSKCG + +V
Sbjct: 271 PDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREV 330
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F M +I+++N++I+G G+HG +A F D++ GL PD+ TF LL +C H GLV
Sbjct: 331 FNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLV 390
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+GR F M+ ++ I + EH I MV +LG AG ++EA+ FI ++P D + ALLS
Sbjct: 391 MEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLS 450
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+ N +L E V+ ++ P V+LSN Y+ GRWDD +R D GL+K
Sbjct: 451 ACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKI 510
Query: 544 AGVSWVS 550
G SW+
Sbjct: 511 PGCSWIE 517
>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 179/550 (32%), Positives = 290/550 (52%), Gaps = 6/550 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ + + S +E+H + + L + + +T LV YA L A+ +FDK +R
Sbjct: 124 FVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKR 183
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V WNS+I ++L D + ++ + P++ T + A ++ + L + +H
Sbjct: 184 DVVAWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIH 243
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD--GVSDPDLVLCNSMISGFAHCGF 185
G + G D + + ++ Y K ID A ++FD G+ + V ++M+ + C F
Sbjct: 244 GFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNE-VTWSAMVGAYVVCDF 302
Query: 186 WDKSLQLFDWMLRLGK---TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++L+LF +L L TL +I + LS G +H + +KS F V
Sbjct: 303 MREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMV 362
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+SMYA+C +N A FN + D V+++A+I+GY Q G+ + L F ++ + G
Sbjct: 363 GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ +ASVL A A A + G+ H Y I GF M+ +AL+DMY+KCG + +
Sbjct: 423 NPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF+ M +R I+++N++I+ G+HG +A F ++ +GL PD+ TF L+ AC H GL
Sbjct: 483 VFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGL 542
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V +G+ F MT+++GI + EHY MV LL AG +E +SFI +P D V GALL
Sbjct: 543 VAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALL 602
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
S C +Y N +L E V+ ++ + P V+LSN Y+ GRWDD ++R + G K
Sbjct: 603 SACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEK 662
Query: 543 EAGVSWVSGS 552
G SW+ S
Sbjct: 663 SPGCSWIEIS 672
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 210/389 (53%), Gaps = 10/389 (2%)
Query: 38 PFYATKLVRLYALNNVLPSARILFDKTPQR--SVFLWNSIIRAYALAHRFNDAKSLFKNL 95
PF KLV LY + L AR +FDK P R +V LWN +IRAYA + +A L+ +
Sbjct: 53 PF--EKLVDLYIACSELKIARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKM 110
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
L + P+ FT+ + +ACS + R +H L + S+ALV Y+K +
Sbjct: 111 LGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCL 170
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFA-HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
D+A +VFD + D+V NSMISGF+ H G +D+ +L M + +P+ T+VG++
Sbjct: 171 DDAKEVFDKMHKRDVVAWNSMISGFSLHEGSYDEVARLLVQM-QNDVSPNSSTIVGVLPA 229
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVT 273
+ + + L G+ IHGFC++ F V + ++ +Y +C C++ A +F+ + + VT
Sbjct: 230 VAQVNSLRHGKEIHGFCVRRGFVGDVVVGTGILDVYGKCQCIDYARRIFDMMGIVKNEVT 289
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKA---DPVLIASVLAAAAKSANVWPGAVIHG 330
WSA++ Y +AL F +L M V +A+V+ A ++ G +H
Sbjct: 290 WSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHC 349
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
Y I+ GF L +MV + L+ MY+KCG + ++ F M R+ +++ ++I G +G + +
Sbjct: 350 YAIKSGFVLDLMVGNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEE 409
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCH 419
F ++ G+NP+++T +++L AC H
Sbjct: 410 GLRMFLEMQLSGINPEKATLASVLPACAH 438
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 113/234 (48%), Gaps = 10/234 (4%)
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLK-------SSFDSYDYVSSVLVSMYARCNCMN 257
EY V L S + SL G+ IH LK ++ ++D LV +Y C+ +
Sbjct: 10 EYCTVLLESCIQSKSLFR-GKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELK 68
Query: 258 SAYHVFNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A HVF+ + H ++V W+ LI Y+ G Y +A+ + K+ G + VL A
Sbjct: 69 IARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKA 128
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ G IH + + E +V VS+ALVD Y+KCG L +VF+ M +R+++ +
Sbjct: 129 CSALKEASEGREIHCDIKRLRLESNVYVSTALVDFYAKCGCLDDAKEVFDKMHKRDVVAW 188
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
NS+I G LH +Y ++ ++P+ ST +L A + G+EI
Sbjct: 189 NSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEI 242
>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 705
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/543 (30%), Positives = 284/543 (52%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
V+ + ++L + +H +V K L D F LV +Y + AR LFDK +R
Sbjct: 35 FVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER 94
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W +I YA + N++ LF+ + + PD + AC++ + R +
Sbjct: 95 DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIID 154
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
D I +A++ Y+K ++ A ++FD + + +++ ++MI+ + + G
Sbjct: 155 DYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 214
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K+L LF ML G PD+ TL L+ + L +G+ IH K D +V + LV
Sbjct: 215 KALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALV 274
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY +C + A +F+ + DLVTW+ +I GY++ G+ ++L F K+ +G D V
Sbjct: 275 DMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKV 334
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ +V+ A AK + I Y+ + F+L V++ +A++DM++KCG + ++F+ M
Sbjct: 335 AMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRM 394
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E+N+I+++++I G HG +A + F ++ G+ P++ T +LL AC H GLV +G
Sbjct: 395 EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGL 454
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F+ M E+Y ++A +HY +V LLG AG L+EA I S+ D + GA L C
Sbjct: 455 RFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRT 514
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + LAE A L E P+ + ++LSN YA GRW+DV K RD + L+K G +
Sbjct: 515 HKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWT 574
Query: 548 WVS 550
W+
Sbjct: 575 WIE 577
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/338 (30%), Positives = 173/338 (51%)
Query: 92 FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
F+ L+R +PDN+T + RAC + +L R +H GL D +ALV Y K
Sbjct: 18 FRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVK 77
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
I++A +FD + + DLV MI G+A CG ++SL LF+ M G PD+ +V +
Sbjct: 78 CREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTV 137
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+ + + + I + + F + + ++ MYA+C C+ SA +F+ + ++
Sbjct: 138 VFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNV 197
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
++WSA+I Y G KAL FR + G D + +AS+L A + N+ G +IH
Sbjct: 198 ISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHI 257
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
V + G +L V +ALVDMY KC + +F+ M ER+++T+ +I G G ++
Sbjct: 258 VYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANES 317
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
F + E+G+ PD+ ++ AC G ++ R I
Sbjct: 318 LVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTI 355
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 159/298 (53%), Gaps = 5/298 (1%)
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
M+ GFA G + F ++R G PD YTL +I + L +G+ IH K
Sbjct: 1 MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
D +V + LV MY +C + A +F+ + DLVTW+ +I GY++ G ++L F
Sbjct: 61 LDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFE 120
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
K+ +G D V + +V+ A AK + +I Y+ + F+L V++ +A++DMY+KCG
Sbjct: 121 KMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCG 180
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ ++F+ M E+N+I+++++I G HG +A + FR ++ G+ PD+ T ++LL
Sbjct: 181 CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLY 240
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYSFIWSLPK 471
AC + GR + + ++G+ +H++ +V + G +E+A +P+
Sbjct: 241 ACSDLKNLQMGR-LIHHIVYKFGLD--LDHFVCAALVDMYGKCREIEDARFLFDKMPE 295
>gi|15225445|ref|NP_178983.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206168|sp|Q9SIT7.1|PP151_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g13600
gi|4558664|gb|AAD22682.1| hypothetical protein [Arabidopsis thaliana]
gi|330251150|gb|AEC06244.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 697
Score = 306 bits (785), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 192/605 (31%), Positives = 298/605 (49%), Gaps = 69/605 (11%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
KS S + +HA V K+ + F +L+ Y+ L R +FDK PQR+++ WN
Sbjct: 31 KSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWN 90
Query: 74 SIIRAYALAHRFNDAKSLFKNL-LRTQLK------------------------------P 102
S++ ++A SLF+++ R Q
Sbjct: 91 SVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVL 150
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
+ +++A + ACS +D+ VH S D SALV YSK +++A +VF
Sbjct: 151 NEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVF 210
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + D ++V NS+I+ F G ++L +F ML PDE TL +IS S +
Sbjct: 211 DEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIK 270
Query: 223 VGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFNSL--------------- 266
VGQ +HG +K+ D + S+ V MYA+C+ + A +F+S+
Sbjct: 271 VGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGY 330
Query: 267 ----------------FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
++V+W+ALI GY+Q G+ +AL F L + A
Sbjct: 331 AMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFA 390
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGLGIQVF 364
++L A A A + G H +V++HGF E + V ++L+DMY KCG + G VF
Sbjct: 391 NILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF 450
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
M ER+ +++N++I+G +G+ +A E FR+++E G PD T +L AC H G V
Sbjct: 451 RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVE 510
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+GR F+ MT ++G+ +HY MV LLG AG LEEA S I +P D + G+LL+
Sbjct: 511 EGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAA 570
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C ++ N L + VA +L E +P V+LSN YAE G+W+DVM +R + G+ K+
Sbjct: 571 CKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQP 630
Query: 545 GVSWV 549
G SW+
Sbjct: 631 GCSWI 635
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 197/419 (47%), Gaps = 44/419 (10%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +++ ++H+L+AK+ L D + + LV +Y+ + A+ +FD+ R+
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS+I + +A +F+ +L ++++PD T A + AC+ S + + VHG
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 129 GAIVSG-LGRDSITSSALVTAYSKLSLIDEAIKVFDG----------------------- 164
+ + L D I S+A V Y+K S I EA +FD
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 165 --------VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+++ ++V N++I+G+ G +++L LF + R P Y+ ++
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 217 EPSLLSVGQGI------HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
+ + L +G HGF +S + +V + L+ MY +C C+ Y VF + D
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
V+W+A+I G++Q G +AL FR++ G+K D + + VL+A + V G H
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR--HY 515
Query: 331 Y-VIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLH 385
+ + F ++ + + +VD+ + G+L + E M + + + + S++ +H
Sbjct: 516 FSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVH 574
>gi|356546044|ref|XP_003541442.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Glycine max]
Length = 628
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 168/552 (30%), Positives = 294/552 (53%), Gaps = 11/552 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLP-SARIL-FDKTPQR 67
L+ + +LS+ KELH + K + P T L+ +Y+ +++ S R+ F +
Sbjct: 36 LQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLRVFNFPTHHNK 95
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+VF +N++I + A +L+ + + PD FT+ C+ RAC ++ D + +H
Sbjct: 96 NVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDDDDGFVVTKIH 155
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G GL D SALV Y K + EA +VF+ + D+VL N+M++GFA G ++
Sbjct: 156 GLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMVNGFAQIGRFE 215
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++L +F M G P YT+ G++S G+ +HGF K ++S VS+ L+
Sbjct: 216 EALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYESGVVVSNALI 275
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD-YGKALYYFRKLNMQGKKADP 306
MY +C C+ A VF + D+ +W+++++ + + GD YG + R + + D
Sbjct: 276 DMYGKCKCVGDALSVFEMMDEIDIFSWNSIMSVHERCGDHYGTLRLFDRMMGSSRVQPDL 335
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS--------VMVSSALVDMYSKCGYLG 358
V + +VL A A + G IHGY++ +G V++++AL+DMY+KCG +
Sbjct: 336 VTVTTVLPACTHLAALMHGREIHGYMVVNGLAKEESHDVFDDVLLNNALMDMYAKCGNMR 395
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
VF M E+++ ++N +I G G+HG+ +A + F + + + P+E +F LL AC
Sbjct: 396 DARMVFVNMREKDVASWNIMITGYGMHGYGGEALDIFSRMCQAQMVPNEISFVGLLSACS 455
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H G+V +G + M +YG+ EHY ++ +L AG L EAY + ++P DP
Sbjct: 456 HAGMVKEGLGFLSEMESKYGVSPSIEHYTCVIDMLCRAGQLMEAYDLVLTMPFKADPVGW 515
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
+LL+ C ++ ++DLAE+ A ++ E +P V++SN Y GR+++V++ R +
Sbjct: 516 RSLLAACRLHNDTDLAEVAASKVIELEPDHCGNYVLMSNVYGVVGRYEEVLEWRYTMKQQ 575
Query: 539 GLRKEAGVSWVS 550
++K G SW+
Sbjct: 576 NVKKRPGCSWIE 587
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 116/243 (47%), Gaps = 5/243 (2%)
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
T D T + + + LS G+ +H LK++F + L++MY++C+ ++ +
Sbjct: 26 TYDLGTCIATLQSCAHNANLSKGKELHTHLLKNAFFGSPLAITSLINMYSKCSLIDHSLR 85
Query: 262 VFNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VFN H ++ ++ALI G+ +AL + ++ G D V+ A
Sbjct: 86 VFNFPTHHNKNVFAYNALIAGFLANALPQRALALYNQMRHLGIAPDKFTFPCVIRACGDD 145
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ + IHG + + G EL V V SALV+ Y K ++G +VFE + R+++ +N+++
Sbjct: 146 DDGFVVTKIHGLMFKVGLELDVFVGSALVNTYLKFRFVGEAYRVFEELPVRDVVLWNAMV 205
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI---FTRMTEE 436
G G +A FR + G+ P T + +L G ++GR + T+M E
Sbjct: 206 NGFAQIGRFEEALGVFRRMGGNGVVPCRYTVTGVLSIFSVMGDFDNGRAVHGFVTKMGYE 265
Query: 437 YGI 439
G+
Sbjct: 266 SGV 268
>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 698
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 169/551 (30%), Positives = 301/551 (54%), Gaps = 9/551 (1%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS----ARI 59
N L+LE K+ + L+ E+HA + K LL P A L+ A+ +LP+ A
Sbjct: 25 NPKTLILEQCKTIRDLN---EIHAHLIKTRLLLKPKVAENLLESAAI--LLPTSMDYAVS 79
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F + + +N +IR + L ++A LFK + ++PD FT+ CI + CS
Sbjct: 80 IFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQA 139
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L +H + G G + L+ Y+ ++ A +VFD +S+ ++ NSM +G
Sbjct: 140 LSEGEQIHALIMKCGFGSHGFVKNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAG 199
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G W++ ++LF ML L DE TLV +++ + L +G+ I+ + +
Sbjct: 200 YTKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGN 259
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ + LV MYA+C +++A +F+ + D+V WSA+I+GYSQ +AL F ++
Sbjct: 260 PTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQK 319
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+ + + S+L++ A + G +H ++ + +L+V + +AL+D Y+KCG +
Sbjct: 320 ANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGSVES 379
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
I+VF M +N++++ +I GL +G +A E+F ++EK + P++ TF +L AC H
Sbjct: 380 SIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSACSH 439
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV++GR++F M+ ++GI+ + EHY MV +LG AG +EEA+ FI ++P + +
Sbjct: 440 AGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAVIWR 499
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
LL+ C ++ N ++ E QL +P ++LSN YA GRW+D +K+R ++ + G
Sbjct: 500 TLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDALKVRGEMKEKG 559
Query: 540 LRKEAGVSWVS 550
++K G S +
Sbjct: 560 IKKTPGCSLIE 570
>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 708
Score = 306 bits (783), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 178/532 (33%), Positives = 285/532 (53%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++ HA+ K + D F + L+ +Y +L AR +FD+ P+R+ W ++I YA+
Sbjct: 131 QQAHAVAIKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQ 190
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A +F+ + R + + F + + A + + + +H A+ +GL
Sbjct: 191 RLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSIL 250
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALVT Y+K +D++++VF+ +D + + ++MI+G+A G K+L+LF M G
Sbjct: 251 NALVTMYAKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGIN 310
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P E+TLVG+++ + + G+ +H + LK F+S Y+ + LV MYA+ A
Sbjct: 311 PSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKG 370
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN L PDLV W+++I GY Q G+ AL + ++ M+G + + +ASVL A + A
Sbjct: 371 FNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAF 430
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH I++G L V + SAL MY+KCG L G VF M ER+II++N++I GL
Sbjct: 431 DQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGL 490
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+G+ +A E F ++ ++ PD+ TF +L AC H GLV+ G F M +E+G+ K
Sbjct: 491 SQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGWLYFRMMFDEFGLLPK 550
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV +L AG L EA FI S + LL C Y N +L +L
Sbjct: 551 VEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLM 610
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
E ++ + V+LS Y GR +DV ++R + G+ KE G SW+ SN
Sbjct: 611 ELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCSWIELKSN 662
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 131/461 (28%), Positives = 229/461 (49%), Gaps = 5/461 (1%)
Query: 15 SHQ-SLSRTKELHALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLW 72
+HQ SL + + LHA + K AS + A L+ YA LP A+++FD+ + V W
Sbjct: 18 THQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKAKLVFDRIHNKDVISW 77
Query: 73 NSIIRAYALAHRFNDA--KSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
N +I Y+ + LF+ + + P+ T++ I A S S + + H A
Sbjct: 78 NCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAASNLSSIFFGQQAHAVA 137
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
I D S+L+ Y K L+ EA +VFD + + + V +MISG+A ++
Sbjct: 138 IKMACFYDVFVGSSLLNMYCKAGLLFEAREVFDRMPERNEVTWATMISGYAIQRLAGEAF 197
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
++F+ M R + +E+ ++S L P + G+ IH +K+ + + + LV+MY
Sbjct: 198 EVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAVKTGLLVFLSILNALVTMY 257
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C ++ + VF + +TWSA+ITGY+Q GD KAL F +++ G +
Sbjct: 258 AKCGSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHKALKLFSRMHFAGINPSEFTLV 317
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
VL A + + V G +H Y+++ GFE + + +ALVDMY+K G + F + +
Sbjct: 318 GVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQP 377
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++ + S+I G +G A + + +G+ P+E T +++L AC + + GR+I
Sbjct: 378 DLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIH 437
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
R T +YG+ + + + GNLEE +P+
Sbjct: 438 AR-TIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRMPE 477
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 134/313 (42%), Gaps = 12/313 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++ K++H + K + T LV +YA + V AR F+ Q + LW S+I
Sbjct: 328 AVEEGKQVHNYLLKLGFESQLYIMTALVDMYAKSGVTEDARKGFNYLQQPDLVLWTSMIA 387
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y DA SL+ + + P+ T A + +ACS + R +H I GLG
Sbjct: 388 GYVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGL 447
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ SAL T Y+K ++E VF + + D++ N+MISG + G+ ++L+LF+ M
Sbjct: 448 EVTIGSALSTMYAKCGNLEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMR 507
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYAR 252
+ PD+ T V ++S L+ G + FD + + V +V + +R
Sbjct: 508 QQDTKPDDVTFVNVLSACSHMGLVDSGW----LYFRMMFDEFGLLPKVEHYACMVDVLSR 563
Query: 253 CNCMNSAYHVFNS-LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLI 309
+ A S L W L+ +Y Y KL G + VL+
Sbjct: 564 AGKLYEAKEFIESTTIDHGLCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYVLL 623
Query: 310 ASVLAAAAKSANV 322
+ + A + +V
Sbjct: 624 SGIYTALGRPEDV 636
>gi|224096022|ref|XP_002310520.1| predicted protein [Populus trichocarpa]
gi|222853423|gb|EEE90970.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 193/615 (31%), Positives = 298/615 (48%), Gaps = 69/615 (11%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L +S + +H + + + F +L+ +Y L AR +FD+ +R+
Sbjct: 30 LLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVFDRMSERN 89
Query: 69 VFL-------------------------------WNSIIRAYALAHRFNDAKSLFKNLLR 97
VF WNS+I +A RF +A F + R
Sbjct: 90 VFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALDWFVRMHR 149
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
+++++ ACS DL +HG S D S L+ YSK L+
Sbjct: 150 DDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYSKCGLVGC 209
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +VFDG+ + ++V N +I+ + G ++L+ F M LG PDE TL ++S
Sbjct: 210 ARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLASVVSACAT 269
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFN------------ 264
+ G IH +KS D + + LV MYA+C +N A VF+
Sbjct: 270 LAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVRNAVSETT 329
Query: 265 ---------------SLF----HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
S+F D+V+W+ALI GY+Q G+ +AL FR L +
Sbjct: 330 MVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLKRESVCPT 389
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGL 359
++L A+A A++ G H +V++HGF E + V ++L+DMY KCG +
Sbjct: 390 HYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYMKCGSVEE 449
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
G++VFE M E++ +++N++I+G +G+ +A E F+ ++E G PD T LCAC H
Sbjct: 450 GLRVFENMVEKDHVSWNTMIIGYAQNGYGMEALELFQKMLESGEKPDHVTMIGTLCACSH 509
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV +GR F MT+E+G+ +HY MV LLG AG LEEA I S+PK D V
Sbjct: 510 AGLVEEGRRYFFSMTKEHGLLPVKDHYTCMVDLLGRAGCLEEAKDLIESMPKQPDAVVWS 569
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
+LLS C ++ N L + VA ++FE DP V+L+N Y+E GRW D + +R + G
Sbjct: 570 SLLSACKVHRNITLGKYVAEKIFEIDPTSSGPYVLLANMYSELGRWGDAVSVRKLMRRRG 629
Query: 540 LRKEAGVSWVSGSSN 554
+ K+ G SW+ SN
Sbjct: 630 VVKQPGCSWIDIQSN 644
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 184/428 (42%), Gaps = 68/428 (15%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D+ +A + C + R VHG I + + + L+ Y K +D A KVF
Sbjct: 23 DSSPFAKLLDLCVKLRSSRDARSVHGRLIQTPFCEEVFIQNRLIDVYGKCGYLDYARKVF 82
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLF----------------------------D 194
D +S+ ++ NS+IS GF D+S LF D
Sbjct: 83 DRMSERNVFSFNSIISTLMRWGFVDESAWLFSLMPEKDQCSWNSMIAGFAQHDRFEEALD 142
Query: 195 WMLRLGKTP---DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
W +R+ + ++Y+ +S L +G IHG KS + ++ S L+ Y+
Sbjct: 143 WFVRMHRDDFVLNDYSFGSGLSACSRLKDLKLGAQIHGLISKSKYSLDVFMGSGLIDFYS 202
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C + A VF+ + ++V+W+ LIT Y Q G +AL F ++ G K D V +AS
Sbjct: 203 KCGLVGCARRVFDGMEEKNVVSWNCLITCYEQNGPAIEALEAFGRMTELGFKPDEVTLAS 262
Query: 312 VLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
V++A A A G IH V++ F +++ +ALVDMY+KCG + VF+ M R
Sbjct: 263 VVSACATLAAFKEGVQIHARVVKSDKFRNDLILGNALVDMYAKCGRVNEARCVFDRMPVR 322
Query: 371 N-------------------------------IITYNSVILGLGLHGFTYQAFEFFRDII 399
N I+++N++I G +G +A FR +
Sbjct: 323 NAVSETTMVSGYAKSASVKAARSMFATIKQKDIVSWNALIAGYTQNGENEEALGLFRMLK 382
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE-YGIQAKTEHYIY----MVKLLG 454
+ + P TF LL A + + GR+ + + + + Q+ E I+ ++ +
Sbjct: 383 RESVCPTHYTFGNLLNASANLADLELGRQAHSHVVKHGFRFQSGEEPDIFVGNSLIDMYM 442
Query: 455 LAGNLEEA 462
G++EE
Sbjct: 443 KCGSVEEG 450
>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
Length = 787
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 176/532 (33%), Positives = 290/532 (54%), Gaps = 12/532 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LH L A D F A+ L +LY + AR +FD P LWN+++
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSPDTILWNTLLAGLP-- 191
Query: 83 HRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
++A F ++ +++PD+ T A RA +E S + R VHG + GL
Sbjct: 192 --GSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHV 249
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L++ YSK +D A +FD + +PDLV N++ISG++ G + S++LF + G
Sbjct: 250 VTGLMSLYSKCGDMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSVELFKELTASGW 309
Query: 202 TPDEYTLVGLISGLWEP---SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
P+ TLV +I ++ P LL+ + +H F +K+ D+ VS+ L ++Y R N M S
Sbjct: 310 RPNSSTLVAVIP-VYSPFGHELLA--RCLHAFVVKARLDADALVSTALTTLYCRLNDMES 366
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+++ + +W+A+I+GY+Q G A+ F+ + + +P+ I+S L+A A
Sbjct: 367 ARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAH 426
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +H + + EL+V V +AL+DMY+KCG + +F+ M +N++++N++
Sbjct: 427 LGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAM 486
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G GLHG +A + ++D+++ + P STF +++ AC HGGLV++G+++F MT EY
Sbjct: 487 ISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYR 546
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK-PVDPAVSGALLSCCHIYGNSDLAEIV 497
I EH MV LLG AG L EA I P+ + P V GALL C ++ NSDLA++
Sbjct: 547 ITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVHKNSDLAKLA 606
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ +LFE D Y V+LSN Y + + +R + L K G + +
Sbjct: 607 SQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTLI 658
>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 801
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 168/530 (31%), Positives = 283/530 (53%), Gaps = 2/530 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+E+H V K D F L+ +Y+ L AR+LFDK + V W+++IR+Y +
Sbjct: 144 QEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRS 203
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSIT 141
++A L +++ ++KP IT +E +DL + +H + +G G+ +
Sbjct: 204 GLLDEALDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVP 263
Query: 142 -SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+AL+ Y K + A +VFDG+S ++ +MI+ + HC ++ ++LF ML G
Sbjct: 264 LCTALIDMYVKCENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEG 323
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+E T++ L+ L +G+ +H F L++ F +++ + MY +C + SA
Sbjct: 324 MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSAR 383
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+S DL+ WSA+I+ Y+Q +A F + G + + + S+L AK+
Sbjct: 384 SVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG 443
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G IH Y+ + G + +++ ++ VDMY+ CG + ++F ++R+I +N++I
Sbjct: 444 SLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMIS 503
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +HG A E F ++ G+ P++ TF L AC H GL+ +G+ +F +M E+G
Sbjct: 504 GFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFT 563
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
K EHY MV LLG AG L+EA+ I S+P + AV G+ L+ C ++ N L E A Q
Sbjct: 564 PKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQ 623
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+P K Y V++SN YA RW DV +R + D G+ KE GVS +
Sbjct: 624 FLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIE 673
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 232/490 (47%), Gaps = 25/490 (5%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
H +L+ T++LH K S + V L AL + +A I FL S
Sbjct: 53 HINLNETQQLHGHFIKTS-----SNCSYRVPLAALESYSSNAAI--------HSFLITSY 99
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I+ A DA ++ + T + DNF + +AC + VHG + +G
Sbjct: 100 IKNNCPA----DAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGF 155
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D +AL+ YS++ + A +FD + + D+V ++MI + G D++L L
Sbjct: 156 HGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRSYDRSGLLDEALDLLRD 215
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYARC 253
M + P E ++ + L E + L +G+ +H + +++ V + L+ MY +C
Sbjct: 216 MHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCTALIDMYVKC 275
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ A VF+ L +++W+A+I Y + + + F K+ +G + + + S++
Sbjct: 276 ENLAYARRVFDGLSKASIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLV 335
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ + G ++H + +++GF LS+++++A +DMY KCG + VF++ ++++
Sbjct: 336 KECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLM 395
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++++I + +AF+ F + G+ P+E T +LL C G + G+ I + +
Sbjct: 396 MWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYI 455
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
++ GI+ V + G+++ A+ +++ D ++ A++S ++G+ +
Sbjct: 456 DKQ-GIKGDMILKTSFVDMYANCGDIDTAHR-LFAEATDRDISMWNAMISGFAMHGHGE- 512
Query: 494 AEIVAHQLFE 503
A +LFE
Sbjct: 513 ---AALELFE 519
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 125/269 (46%), Gaps = 10/269 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K LHA + AT + +Y + SAR +FD + + +W+++I
Sbjct: 343 ALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSARSVFDSFKSKDLMMWSAMIS 402
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+YA + ++A +F ++ ++P+ T + C++ L +++H G+
Sbjct: 403 SYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKG 462
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D I ++ V Y+ ID A ++F +D D+ + N+MISGFA G + +L+LF+ M
Sbjct: 463 DMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEME 522
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYAR 252
LG TP++ T +G + LL G+ +H F + Y +V + R
Sbjct: 523 ALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHY----GCMVDLLGR 578
Query: 253 CNCMNSAYHVFNSL-FHPDLVTWSALITG 280
++ A+ + S+ P++ + + +
Sbjct: 579 AGLLDEAHELIKSMPMRPNIAVFGSFLAA 607
>gi|224090799|ref|XP_002309086.1| predicted protein [Populus trichocarpa]
gi|222855062|gb|EEE92609.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 305 bits (782), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 162/514 (31%), Positives = 282/514 (54%), Gaps = 10/514 (1%)
Query: 47 LYALNNVLPSARILFDKTPQ--RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDN 104
+YA N + A ++ ++T R+VF +N++I + L D ++ + + + PD
Sbjct: 1 MYAKCNQMNQALLVLNRTADYARNVFAYNALISGFVLNGLPQDGLGAYEEMRQAGVLPDK 60
Query: 105 FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG 164
+T+ C+ + E ++ ++ +HG GL D S+LV++Y K L+ EA ++FD
Sbjct: 61 YTFPCLIKGLCEVMEVFQVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDE 120
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ D D+VL NSM++G+A G +D++L + M + G ++T+ G++S G
Sbjct: 121 IPDRDVVLWNSMVNGYAQIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNG 180
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +HGF +K FDS V + L+ MY +C C+ A +F ++ D+ +W+++++
Sbjct: 181 RLVHGFMIKMGFDSCVSVCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELC 240
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF------- 337
D+ L F ++ G + D V I ++L A + A + G IHGY+I +GF
Sbjct: 241 SDHDGTLRLFDRMLGDGVQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESE 300
Query: 338 -ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
++ +AL+DMY+KCG + VF MS R+ ++N +I+G G+HG+ +A F
Sbjct: 301 NMYNLQTINALMDMYAKCGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFS 360
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
D+ + GL P+E TF +L AC H G ++ G + M ++G+ +HY ++ +LG A
Sbjct: 361 DMCKSGLKPNEITFVGVLLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRA 420
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G LEEAY ++P +P V ALL+ C +YGN DLAE+ A ++FE +P V++S
Sbjct: 421 GQLEEAYKLAVTMPIQTNPVVWRALLAACQLYGNVDLAEVAAQKVFELNPAHCGNYVLMS 480
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
N Y GR+ +V+ +R + ++K G SW+
Sbjct: 481 NAYVAAGRYQEVLDIRHTMRQQDVKKTPGCSWIE 514
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 190/395 (48%), Gaps = 12/395 (3%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ K++H LV K L D + + LV Y + ++ AR LFD+ P R V LWNS++ YA
Sbjct: 78 QVKKIHGLVRKLGLDLDMYVGSSLVSSYLKSELMKEARELFDEIPDRDVVLWNSMVNGYA 137
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
RF++A + + + + + FT + + + D R VHG I G
Sbjct: 138 QIGRFDEALGVCREMSQEGVLMSKFTVSGVLSVFAGRGDFDNGRLVHGFMIKMGFDSCVS 197
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+AL+ Y K + +A+++F+ +++ D+ NS++S C D +L+LFD ML G
Sbjct: 198 VCNALIDMYGKCRCVVDALEIFETMNEKDIFSWNSILSANELCSDHDGTLRLFDRMLGDG 257
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-------DSYDYVS-SVLVSMYAR 252
D T+ ++ + L G+ IHG+ + + F + Y+ + + L+ MYA+
Sbjct: 258 VQLDLVTITTILPACSHLAALVHGREIHGYMIVNGFVKDGESENMYNLQTINALMDMYAK 317
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C M A VF ++ + D +W+ +I GY G +ALY F + G K + + V
Sbjct: 318 CGSMRDAGMVFYNMSNRDTASWNIMIMGYGMHGYGNEALYMFSDMCKSGLKPNEITFVGV 377
Query: 313 LAAAAKSANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ER 370
L A + + + G G + ++HG ++ + ++DM + G L ++ TM +
Sbjct: 378 LLACSHAGFISQGIKFLGEMELKHGVVPTIQHYTCVIDMLGRAGQLEEAYKLAVTMPIQT 437
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
N + + +++ L+G A + + E LNP
Sbjct: 438 NPVVWRALLAACQLYGNVDLAEVAAQKVFE--LNP 470
>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 986
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 280/534 (52%), Gaps = 1/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L + K++HA + + + + T ++ +Y + A +FD R+V W ++I
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+A R ++A F ++ + ++P+ T+ I ACS S L + + I +G G
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +AL++ Y+K + +A +VF+ +S ++V N+MI+ + +D +L F +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
L+ G P+ T +++ L +G+ +H +K+ +S +VS+ LVSM+ C +
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDL 565
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA ++FN + DLV+W+ +I G+ Q G A YF+ + G K D + +L A
Sbjct: 566 MSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H + + F+ V+V + L+ MY+KCG + QVF + ++N+ ++
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWT 685
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I G HG +A E F + ++G+ PD TF L AC H GL+ +G F M +E
Sbjct: 686 SMITGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KE 744
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+ I+ + EHY MV L G AG L EA FI + D V GALL C ++ N +LAE
Sbjct: 745 FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEK 804
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A + E DP V+LSN YA G W +V K+R ++D G+ K+ G SW+
Sbjct: 805 AAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 232/455 (50%), Gaps = 1/455 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++ + +EL+ L+ KA D F T L+ ++ + A +FD P R + W S+I
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A RF A +LF+ + ++PD + + RAC+ L + VH G
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ +A+++ Y+K +++A++VFD V ++V +MI+GFA G D++ F+ M
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM 404
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+ T + ++ PS L GQ I +++ + S D V + L+SMYA+C +
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSL 464
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A+ VF + ++V W+A+IT Y Q Y AL F+ L +G K + S+L
Sbjct: 465 KDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
S ++ G +H +++ G E + VS+ALV M+ CG L +F M +R+++++N
Sbjct: 525 KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWN 584
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I G HG AF++F+ + E G+ PD+ TF+ LL AC + +GR + +TE
Sbjct: 585 TIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA 644
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
++ + G++E+A+ LPK
Sbjct: 645 -AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPK 678
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 214/409 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L ++L + ++ + K+ + D F L+ +YA SA+ +FD ++
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKD 175
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V+ WN ++ Y + +A L + +++ +KPD T+ + AC++ ++ R ++
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G D +AL+ + K I +A KVFD + DLV SMI+G A G + +
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ LF M G PD+ V L+ P L G+ +H + +D+ YV + ++S
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS 355
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C M A VF+ + ++V+W+A+I G++Q G +A +F K+ G + + V
Sbjct: 356 MYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
S+L A + + + G I ++I+ G+ V +AL+ MY+KCG L +VFE +S
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++N++ +N++I H A F+ ++++G+ P+ STF+++L C
Sbjct: 476 KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 211/400 (52%), Gaps = 3/400 (0%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N+++ + A +FN+A + + + + ++ TY+ + + C + +L ++
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
SG+ D + L+ Y+K A ++FD + + D+ N ++ G+ G ++++ +L
Sbjct: 139 SGVQPDIFMWNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
+ M++ PD+ T V +++ + + G+ ++ LK+ +D+ +V + L++M+ +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C + A VF++L DLVTW+++ITG ++ G + +A F+++ +G + D V S+
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A + G +H + + G++ + V +A++ MY+KCG + ++VF+ + RN+
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++ ++I G HG +AF FF +IE G+ P+ TF ++L AC + G++I
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 433 MTEE-YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ E YG + ++ + G+L++A+ + K
Sbjct: 439 IIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISK 476
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 193/413 (46%), Gaps = 42/413 (10%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L R +++ + +A D T L+ +YA L A +F+K +++
Sbjct: 419 ILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQN 478
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I AY ++++A + F+ LL+ +KP++ T+ I C + L ++VH
Sbjct: 479 VVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHF 538
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +GL D S+ALV+ + + A +F+ + DLV N++I+GF G
Sbjct: 539 LIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQV 598
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ F M G PD+ T GL++ P L+ G+ +H +++FD V + L+S
Sbjct: 599 AFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLIS 658
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + A+ VF+ L ++ +W+++ITGY+Q G +AL F ++ +G K D +
Sbjct: 659 MYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWIT 718
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
L+A A + G + G+ F++M
Sbjct: 719 FVGALSACAHA-----------------------------------GLIEEGLHHFQSMK 743
Query: 369 ERNIIT----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
E NI Y ++ G G +A EF II+ + PD + ALL AC
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEF---IIKMQVEPDSRVWGALLGAC 793
>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 738
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 172/572 (30%), Positives = 297/572 (51%), Gaps = 34/572 (5%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQR 67
L L + +S K++H+ + K L F +KL+ A++ L A +LF+ Q
Sbjct: 36 LTLLSTCKSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQP 95
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ F+WN++IR +L+ A + +L ++P+++T+ + ++C++ + +H
Sbjct: 96 NQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQIH 155
Query: 128 GGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLID 156
G + GL RD+++ +AL+T Y+ +D
Sbjct: 156 GHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCLD 215
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A ++F+ + D V N+MI+G+A G ++++L F M R P+E T+V ++S
Sbjct: 216 DARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSACA 275
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ L +G + + S + + L+ MY++C ++ A +F + D+++W+
Sbjct: 276 QSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWNV 335
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I GYS Y +AL FRK+ + + V S+L A A + G IH Y+ +
Sbjct: 336 MIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKKF 395
Query: 337 FELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
L+ + ++L+DMY+KCG + QVF M +++ ++N++I GL +HG A E F
Sbjct: 396 LGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALELF 455
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
R + ++G PD+ TF +L AC H GLV GR+ F+ M E+Y I K +HY M+ LLG
Sbjct: 456 RQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLGR 515
Query: 456 AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
AG +EA + + ++ D A+ G+LL C ++GN +L E A LFE +P V+L
Sbjct: 516 AGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVLL 575
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
SN YA GRWDDV ++R + D G++K G S
Sbjct: 576 SNIYATAGRWDDVARIRTKLNDKGMKKVPGCS 607
>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
Length = 986
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 166/534 (31%), Positives = 280/534 (52%), Gaps = 1/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L + K++HA + + + + T ++ +Y + A +FD R+V W ++I
Sbjct: 326 EALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMI 385
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+A R ++A F ++ + ++P+ T+ I ACS S L + + I +G G
Sbjct: 386 AGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYG 445
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +AL++ Y+K + +A +VF+ +S ++V N+MI+ + +D +L F +
Sbjct: 446 SDDRVRTALLSMYAKCGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQAL 505
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
L+ G P+ T +++ L +G+ +H +K+ +S +VS+ LVSM+ C +
Sbjct: 506 LKEGIKPNSSTFTSILNVCKSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDL 565
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA ++FN + DLV+W+ +I G+ Q G A YF+ + G K D + +L A
Sbjct: 566 MSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNAC 625
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H + + F+ V+V + L+ MY+KCG + QVF + ++N+ ++
Sbjct: 626 ASPEALTEGRRLHALITEAAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPKKNVYSWT 685
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I G HG +A E F + ++G+ PD TF L AC H GL+ +G F M +E
Sbjct: 686 SMIAGYAQHGRGKEALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSM-KE 744
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+ I+ + EHY MV L G AG L EA FI + D V GALL C ++ N +LAE
Sbjct: 745 FNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIKMQVEPDSRVWGALLGACQVHLNVELAEK 804
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A + E DP V+LSN YA G W +V K+R ++D G+ K+ G SW+
Sbjct: 805 AAQKKLELDPNDNGVFVILSNIYAAAGMWKEVAKMRKVMLDRGVVKKPGQSWIE 858
Score = 235 bits (599), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 132/455 (29%), Positives = 232/455 (50%), Gaps = 1/455 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++ + +EL+ L+ KA D F T L+ ++ + A +FD P R + W S+I
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMI 284
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A RF A +LF+ + ++PD + + RAC+ L + VH G
Sbjct: 285 TGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWD 344
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ +A+++ Y+K +++A++VFD V ++V +MI+GFA G D++ F+ M
Sbjct: 345 TEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKM 404
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+ T + ++ PS L GQ I +++ + S D V + L+SMYA+C +
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSL 464
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A+ VF + ++V W+A+IT Y Q Y AL F+ L +G K + S+L
Sbjct: 465 KDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
S ++ G +H +++ G E + VS+ALV M+ CG L +F M +R+++++N
Sbjct: 525 KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWN 584
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I G HG AF++F+ + E G+ PD+ TF+ LL AC + +GR + +TE
Sbjct: 585 TIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEA 644
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
++ + G++E+A+ LPK
Sbjct: 645 -AFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLPK 678
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 214/409 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L ++L + ++ + K+ + D F L+ +YA SA+ +FD ++
Sbjct: 116 LLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKD 175
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V+ WN ++ Y + +A L + +++ +KPD T+ + AC++ ++ R ++
Sbjct: 176 VYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYN 235
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G D +AL+ + K I +A KVFD + DLV SMI+G A G + +
Sbjct: 236 LILKAGWDTDLFVGTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQ 295
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ LF M G PD+ V L+ P L G+ +H + +D+ YV + ++S
Sbjct: 296 ACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILS 355
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C M A VF+ + ++V+W+A+I G++Q G +A +F K+ G + + V
Sbjct: 356 MYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVT 415
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
S+L A + + + G I ++I+ G+ V +AL+ MY+KCG L +VFE +S
Sbjct: 416 FMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS 475
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++N++ +N++I H A F+ ++++G+ P+ STF+++L C
Sbjct: 476 KQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524
Score = 182 bits (461), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 211/400 (52%), Gaps = 3/400 (0%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N+++ + A +FN+A + + + + ++ TY+ + + C + +L ++
Sbjct: 79 NAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERIYNHIKK 138
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
SG+ D + L+ Y+K A ++FD + + D+ N ++ G+ G ++++ +L
Sbjct: 139 SGVQPDIFMRNTLINMYAKCGNTISAKQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKL 198
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
+ M++ PD+ T V +++ + + G+ ++ LK+ +D+ +V + L++M+ +
Sbjct: 199 HEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFVGTALINMHIK 258
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C + A VF++L DLVTW+++ITG ++ G + +A F+++ +G + D V S+
Sbjct: 259 CGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGVQPDKVAFVSL 318
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A + G +H + + G++ + V +A++ MY+KCG + ++VF+ + RN+
Sbjct: 319 LRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNV 378
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++ ++I G HG +AF FF +IE G+ P+ TF ++L AC + G++I
Sbjct: 379 VSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDH 438
Query: 433 MTEE-YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ E YG + ++ + G+L++A+ + K
Sbjct: 439 IIEAGYGSDDRVR--TALLSMYAKCGSLKDAHRVFEKISK 476
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 192/413 (46%), Gaps = 42/413 (10%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L R +++ + +A D T L+ +YA L A +F+K +++
Sbjct: 419 ILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKISKQN 478
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I AY ++++A + F+ LL+ +KP++ T+ I C + L ++VH
Sbjct: 479 VVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVHF 538
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +GL D S+ALV+ + + A +F+ + DLV N++I+GF G
Sbjct: 539 LIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQV 598
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ F M G PD+ T GL++ P L+ G+ +H +++FD V + L+S
Sbjct: 599 AFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLIS 658
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + A+ VF+ L ++ +W+++I GY+Q G +AL F ++ +G K D +
Sbjct: 659 MYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWIT 718
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
L+A A + G + G+ F++M
Sbjct: 719 FVGALSACAHA-----------------------------------GLIEEGLHHFQSMK 743
Query: 369 ERNIIT----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
E NI Y ++ G G +A EF II+ + PD + ALL AC
Sbjct: 744 EFNIEPRMEHYGCMVDLFGRAGLLNEAVEF---IIKMQVEPDSRVWGALLGAC 793
>gi|224126745|ref|XP_002319916.1| predicted protein [Populus trichocarpa]
gi|222858292|gb|EEE95839.1| predicted protein [Populus trichocarpa]
Length = 606
Score = 305 bits (780), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 280/544 (51%), Gaps = 6/544 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQR 67
+L+ S + + H+ K+ L D F L+ LY L L AR +FD +
Sbjct: 66 LLQTCTKAVSFTHGIQFHSHAIKSGLDTDRFVGNSLLALYFKLGPNLFEARRVFDGLFYK 125
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W S+I Y + + LF +L ++P+ FT + + +ACS DL + H
Sbjct: 126 DLISWTSMITGYVKVEKPKKSLELFLEMLGLGIEPNGFTLSAVIKACSGLGDLRLGKCFH 185
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G +V G + + S+AL+ Y + S +D+AI VF + PD + S+IS F +D
Sbjct: 186 GVVMVRGFDLNDVISTALIDMYGRNSAVDDAILVFVELPQPDAICWTSIISAFTRNDVYD 245
Query: 188 KSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
K+L F M R G +PD +T +++ L G+ +H + S +V S L
Sbjct: 246 KALGFFYSMCRKHGLSPDGFTFGTVLTACGNLGRLKQGKEVHAKVITSGLSGNVFVESSL 305
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MY +C +N + VF+ + +LV+W+AL+ GY Q GD+ + FR +GKK D
Sbjct: 306 VDMYGKCRLVNQSQCVFDRMSVKNLVSWTALLGGYCQNGDFESVIRIFR----EGKKVDT 361
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+VL A A A V G +H ++ V+ SALVD+Y+KCG + ++F
Sbjct: 362 YSFGTVLRACAGLAAVRQGKEVHCQYVKRCCWRDVVTESALVDLYAKCGCIDFAYRIFVR 421
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
MS RN+IT+NS+I G +G + F+ F ++IE+G+ PD +F +L AC H GLV+ G
Sbjct: 422 MSVRNLITWNSMIYGFAQNGRGGEVFQLFDEMIEEGIRPDYISFVGVLFACSHAGLVDQG 481
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
++ F MTE Y I+ EHY M+ LLG AG LEEA + I + +P++ LL C
Sbjct: 482 KKYFAAMTEVYEIKPGIEHYNCMIDLLGRAGLLEEAENLIENANCRDEPSLWTVLLGACA 541
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+S AE +A + E P V L+N Y GRWDD +K+R+ + G+ K G
Sbjct: 542 ASPHSATAERIAKKAVELKPDHHLSYVYLANVYRAVGRWDDAVKIRNLMTKRGVGKMPGT 601
Query: 547 SWVS 550
SW+
Sbjct: 602 SWIE 605
>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Glycine max]
Length = 676
Score = 304 bits (779), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 176/539 (32%), Positives = 284/539 (52%), Gaps = 9/539 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL + K+ H L+ + L +D + L+R A ++F +TP ++FL+N++I
Sbjct: 14 KSLHQAKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLI 73
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-----GLRFVHGGAI 131
R F DA S++ ++ + PDNFT+ + +AC+ LP GL +H I
Sbjct: 74 RGMVSNDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTR---LPHYFHVGLS-LHSLVI 129
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+G D + LV YSK + +A KVFD + + ++V ++I G+ G + ++L
Sbjct: 130 KTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALG 189
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF +L +G PD +TLV ++ L+ G+ I G+ +S +V++ LV MYA
Sbjct: 190 LFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYA 249
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C M A VF+ + D+V WSALI GY+ G +AL F ++ + + D +
Sbjct: 250 KCGSMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVG 309
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
V +A ++ + G G + F + ++ +AL+D Y+KCG + +VF+ M ++
Sbjct: 310 VFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKD 369
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +N+VI GL + G AF F +++ G+ PD +TF LLC C H GLV+DG F+
Sbjct: 370 CVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFS 429
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M+ + + EHY MV L AG L EA I S+P + V GALL C ++ ++
Sbjct: 430 GMSSVFSVTPTIEHYGCMVDLQARAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDT 489
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
LAE V QL E +P + V+LSN Y+ RWD+ K+R + G++K G SWV
Sbjct: 490 QLAEHVLKQLIELEPWNSGHYVLLSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVE 548
>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 783
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 172/512 (33%), Positives = 281/512 (54%), Gaps = 2/512 (0%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
F + LV LY + + AR +FD P+R LWN++I F+D+ LF+ ++
Sbjct: 144 FVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVAD 203
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
++ D+ T + A +E +L + A+ G G + L++ YSK ++ A
Sbjct: 204 GVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGDVNTA 263
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F ++ PDL+ N+MISGF G + S++LF +L G+ T+VGLI L P
Sbjct: 264 RLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIP-LHSP 322
Query: 219 -SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
L + IHGFC+KS VS+ ++Y + N ++ A H+F+ +V W+A+
Sbjct: 323 FGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAM 382
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I+GY+Q G A+ F+++ + V I ++L+A A+ ++ G +H +
Sbjct: 383 ISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENL 442
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
E ++ VS+ALVDMY+KCG + Q+F++MSE+N +T+N++I G GLHG+ ++A + + +
Sbjct: 443 EPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNE 502
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
++ G NP TF ++L AC H GLV +G EIF M +Y I+ EHY MV +LG +G
Sbjct: 503 MLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSG 562
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
LE+A FI +P PAV G LL C I+ ++D+A + + +LFE DP Y V+LSN
Sbjct: 563 QLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSN 622
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y+ + + +R + L K G + +
Sbjct: 623 IYSVERNFPKAASIRQVVKKRKLAKSPGCTLI 654
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 125/416 (30%), Positives = 216/416 (51%), Gaps = 5/416 (1%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACS 115
AR LF P+ +FL+N ++R ++L + + SL+ +L R T L PDNFTYA ACS
Sbjct: 63 ARALFFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACS 122
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
+ L +H +I+ G G + SALV Y K S + A KVFDG+ + D VL N+
Sbjct: 123 NDKHL---MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNT 179
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
MI+G +D S+QLF M+ G D T+ ++ E L VG GI LK
Sbjct: 180 MINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIG 239
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
F DYV + L+S+Y++C +N+A +F + PDL+ ++A+I+G++ G ++ FR
Sbjct: 240 FGFCDYVLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFR 299
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+L G++ I ++ + ++ IHG+ ++ G L+ VS+A +Y+K
Sbjct: 300 ELLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN 359
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ L +F+ E+ ++ +N++I G +G T A F+++++ P+ T + +L
Sbjct: 360 EIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILS 419
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
AC G ++ G+ + + E ++ +V + GN+ EA+ S+ +
Sbjct: 420 ACAQLGSLSFGKWVHHLIKSE-NLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSE 474
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 2/256 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H K+ ++ +P +T +Y N + AR LFD++P+++V WN++I Y
Sbjct: 332 IHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGS 391
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A SLFK +++T+ P+ T I AC++ L ++VH L + S+A
Sbjct: 392 TETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTA 451
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K I EA ++FD +S+ + V N+MI G+ G+ ++L+L++ ML LG P
Sbjct: 452 LVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPS 511
Query: 205 EYTLVGLISGLWEPSLLSVGQGI-HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
T + ++ L+ G+ I H K + + +V + R + A
Sbjct: 512 AVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFI 571
Query: 264 NSL-FHPDLVTWSALI 278
+ P W L+
Sbjct: 572 KKMPVEPGPAVWGTLL 587
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 149/335 (44%), Gaps = 19/335 (5%)
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
N ++ I +A S P L H I++G D T + L S A +F
Sbjct: 13 NTLFSLINKA----STFPHLAQTHAQFILNGYRFDLATLTKLTQKLFDFSATRHARALFF 68
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGKTPDEYTLVGLISGLWEPSLLS 222
V PD+ L N ++ GF+ S+ L+ + R +PD +T ++ L
Sbjct: 69 SVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAACSNDKHLM 128
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ +H + + S +V S LV +Y + + + A VF+ + D V W+ +I G
Sbjct: 129 L---LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGMPERDTVLWNTMINGLV 185
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ + ++ FR++ G + D + +VL AAA+ + G I ++ GF
Sbjct: 186 KNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDY 245
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII--- 399
V + L+ +YSKCG + +F ++ ++I YN++I G +G T + + FR+++
Sbjct: 246 VLTGLISLYSKCGDVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRELLFSG 305
Query: 400 EK-------GLNPDESTFSALLCAC-CHGGLVNDG 426
E+ GL P S F L AC HG V G
Sbjct: 306 ERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSG 340
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SLS K +H L+ +L + + +T LV +YA + A LFD +++ WN++I
Sbjct: 426 SLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIF 485
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y L ++A L+ +L P T+ + ACS
Sbjct: 486 GYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACS 523
>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
Length = 697
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 296/546 (54%), Gaps = 8/546 (1%)
Query: 12 LSKSHQSLSRT-------KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
L++SH S+ R +++HA + + L + F + L+ Y +L A+ +F T
Sbjct: 23 LAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P ++V W +I A F +A +F+ + KP+ T + + A + + +
Sbjct: 83 PCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH + G + +ALV YSK + A ++F+ +S+ ++V N+++SG++ G
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHG 202
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
F ++++ LF+ M R G D YT++ LI L VG GIHGF +++ +++ ++ +
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKK 303
L+ +Y NC++ A+ VF+ +F D+ W+ ++TG+S + +A+ +F K L +Q K
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D +++ +L++ + S + G +H I+ F ++ V SA++DMY+ CG L +
Sbjct: 323 LDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F M E++++ +N++I G G++G+ A + F + GL+PDESTF ++L AC H G+V
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+G +IF M + +HY ++ +LG AG L+ AYSFI ++P D V LL
Sbjct: 443 YEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+GN L ++ ++FE +P Y V+LSN YA G W+ V R + L+K+
Sbjct: 503 ACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRLKKD 562
Query: 544 AGVSWV 549
G S +
Sbjct: 563 PGFSSI 568
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 65/137 (47%)
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
++R L+ + L S + K ++ P IH +I G + +S++L++ Y
Sbjct: 8 FYRHLSSNPTQRLCPLAQSHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYV 67
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
CG L Q+F +N++++ +I GL + +A + FR++ P+ T S+
Sbjct: 68 YCGLLADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISS 127
Query: 413 LLCACCHGGLVNDGREI 429
+L A + GL+ + +
Sbjct: 128 VLPAFANLGLIRIAKSV 144
>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 710
Score = 304 bits (779), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 180/526 (34%), Positives = 274/526 (52%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+ HAL K S D F + L+ +Y + AR +FD P+R+ W +II YA+
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMER 193
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A LF + R + D F Y + A + + + +H A+ +GL + +
Sbjct: 194 MAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGN 253
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
ALVT Y K +D+A+K F+ D D + ++MI+G+A G ++L LF M G P
Sbjct: 254 ALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKP 313
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
E+T VG+I+ + L G+ IHG+ LK+ ++ Y + LV MYA+C + A F
Sbjct: 314 SEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGF 373
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L PD+V W+++I+GY+Q G+ AL + ++ M+ + +ASVL A + A +
Sbjct: 374 DYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALE 433
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH I++GF L V + SAL MY+KCG L G VF M R+I+T+N++I GL
Sbjct: 434 QGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLS 493
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+G +A E F ++ PD TF +L AC H GLV G+ F M +E+GI +
Sbjct: 494 QNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIVPRV 553
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY MV +L AG L E FI S + LL C Y N +L +L E
Sbjct: 554 EHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLME 613
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ + ++LS+ Y GR DDV ++R + G+ KE G SW+
Sbjct: 614 LGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWI 659
Score = 190 bits (483), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 217/457 (47%), Gaps = 3/457 (0%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
+ L + K +HA + + + LV LYA + A+++F+ + V WN +
Sbjct: 23 QKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCL 82
Query: 76 IRAYALAHR--FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
I Y+ ++ LF+ + P+ T++ + A S + + G H AI +
Sbjct: 83 INGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKT 142
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
D S+L+ Y K+ + +A KVFD + + + V ++ISG+A ++ +LF
Sbjct: 143 SNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELF 202
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M R D++ ++S L P L+ G+ IH LK+ S V + LV+MY +C
Sbjct: 203 XLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKC 262
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
C++ A F D +TWSA+ITGY+Q GD +AL F +++ G K V+
Sbjct: 263 GCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVI 322
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A + + G IHGY ++ G+E + +ALVDMY+KCG L + F+ + E +I+
Sbjct: 323 NACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIV 382
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ S+I G +G A + + + + P E T +++L AC + G++I +
Sbjct: 383 LWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQ- 441
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
T +YG + + + G+LE+ +P
Sbjct: 442 TIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 478
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 1/336 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H L K LL LV +Y L A F+ + + W+++I YA A
Sbjct: 234 KQIHCLALKNGLLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQA 293
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++A +LF N+ KP FT+ + ACS+ L + +HG ++ +G
Sbjct: 294 GDSHEALNLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFM 353
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y+K + +A K FD + +PD+VL SMISG+A G + +L L+ M
Sbjct: 354 TALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIM 413
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P E T+ ++ + L G+ IH +K F + S L +MYA+C + V
Sbjct: 414 PHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLV 473
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D++TW+A+I+G SQ G+ KAL F +L K D V +VL+A + V
Sbjct: 474 FRRMPSRDIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLV 533
Query: 323 WPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYL 357
G V ++ + G V + +VD+ S+ G L
Sbjct: 534 ERGKVYFRMMLDEFGIVPRVEHYACMVDILSRAGKL 569
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 183/380 (48%), Gaps = 13/380 (3%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L P + ++ + C+ DL + +H + +G +++LV Y+K I +A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKS--LQLFDWMLRLGKTPDEYTLVGLISGLWE 217
VF+ +++ D+V N +I+G++ G S ++LF M P+ +T G+ +
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 218 PSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
G H +K+S + YD +V S L++MY + CM A VF+++ + V+W+
Sbjct: 126 SPETFGGLQAHALAIKTS-NFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+GY+ + +A F + + D + SVL+A V G IH +++G
Sbjct: 185 IISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
V +ALV MY KCG L ++ FE +++ IT++++I G G +++A F
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKL 452
++ G P E TF ++ AC G + +G++I Y ++A E IY +V +
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEGKQI-----HGYSLKAGYECQIYFMTALVDM 359
Query: 453 LGLAGNLEEAYSFIWSLPKP 472
G+L +A L +P
Sbjct: 360 YAKCGSLVDARKGFDYLKEP 379
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 134/314 (42%), Gaps = 14/314 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++H KA ++ T LV +YA L AR FD + + LW S+I
Sbjct: 330 ALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKCGSLVDARKGFDYLKEPDIVLWTSMIS 389
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
YA A +L+ + ++ P T A + RACS + L + +H I G
Sbjct: 390 GYAQNGENETALTLYCRMQMERIMPHELTMASVLRACSSLAALEQGKQIHAQTIKYGFSL 449
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ SAL T Y+K +++ VF + D++ N+MISG + G K+L+LF+ L
Sbjct: 450 EVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLSQNGEGLKALELFE-EL 508
Query: 198 RLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYA 251
R G T PD T V ++S L+ G+ + D + V V +V + +
Sbjct: 509 RHGTTKPDYVTFVNVLSACSHMGLVERGK----VYFRMMLDEFGIVPRVEHYACMVDILS 564
Query: 252 RCNCMNSAYHVFNS-LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VL 308
R ++ S + W L+ +Y Y KL G + +L
Sbjct: 565 RAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLMELGSQESSAYIL 624
Query: 309 IASVLAAAAKSANV 322
++S+ A +S +V
Sbjct: 625 LSSIYTALGRSDDV 638
>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 926
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 285/529 (53%), Gaps = 2/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L+ K L+ Y + + A+ LFD+ R V WNS+I Y
Sbjct: 271 RQVHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKN 330
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI-VSGLGRDSIT 141
+ +F +L + D T + AC+ L + +H +I + L R+
Sbjct: 331 GLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRF 390
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++ L+ YSK ++ AI+VF+ + + +V SMI+G+ G D +++LFD M G
Sbjct: 391 NNTLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGV 450
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD Y + +++ L G+ +H + +++ ++ +VS+ L MYA+C M A+
Sbjct: 451 VPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHD 510
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+ + D+++W+ +I GY++ +AL F ++ + K D +A +L A A A
Sbjct: 511 VFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRESK-PDGTTVACILPACASLAA 569
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IHGY +++G+ V++A+VDMY KCG L L +F+ + ++++++ +I G
Sbjct: 570 LDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAG 629
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G+HG+ +A F + G+ PDE +F ++L AC H GL+++G +IF M +E I+
Sbjct: 630 YGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEP 689
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY MV LL GNL +A+ FI ++P D + GALL C I+ + LAE VA ++
Sbjct: 690 NLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERI 749
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
FE +P Y V+L+N YAE +W++V KLR I GL+K G SW+
Sbjct: 750 FELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGLKKNPGCSWIE 798
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 228/422 (54%), Gaps = 2/422 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L +S+ + + +++ + ++ D KLV +Y L R++FDK +
Sbjct: 156 ILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESK 215
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+FLWN +I Y+ + + ++ +LFK +L +KP+++T++ I + + + + R VHG
Sbjct: 216 IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHG 275
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G + ++L++ Y + A K+FD ++D D++ NSMISG+ G D+
Sbjct: 276 LICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGLDDR 335
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYDYVSSVLV 247
+++F ML G D T+V + L +G+ +H + +K ++ D ++ L+
Sbjct: 336 GIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLL 395
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY++C +NSA VF + +V+W+++ITGY ++G A+ F ++ +G D
Sbjct: 396 DMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVY 455
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ S+L A A + N+ G ++H Y+ ++ E + VS+AL DMY+KCG + VF M
Sbjct: 456 AVTSILNACAINGNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKCGSMKDAHDVFSHM 515
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
++++I++N++I G + +A F + +++ PD +T + +L AC ++ GR
Sbjct: 516 KKKDVISWNTMIGGYTKNSLPNEALTLFAE-MQRESKPDGTTVACILPACASLAALDKGR 574
Query: 428 EI 429
EI
Sbjct: 575 EI 576
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 166/330 (50%), Gaps = 1/330 (0%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y I + C+E + R V SG+ D I LV Y K + E VFD +S
Sbjct: 153 YCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLS 212
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ + L N MIS ++ G + +S+ LF ML LG P+ YT ++ + + G+
Sbjct: 213 ESKIFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQ 272
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+HG K F+SY+ V + L+S Y + A +F+ L D+++W+++I+GY + G
Sbjct: 273 VHGLICKLGFNSYNTVVNSLISFYFVGRKVRCAQKLFDELTDRDVISWNSMISGYVKNGL 332
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSS 345
+ + F K+ + G D + +V A A + G V+H Y I+ + V ++
Sbjct: 333 DDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNN 392
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
L+DMYSKCG L I+VFE M E+ ++++ S+I G G + A + F ++ +G+ P
Sbjct: 393 TLLDMYSKCGDLNSAIRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVP 452
Query: 406 DESTFSALLCACCHGGLVNDGREIFTRMTE 435
D +++L AC G + G+ + + E
Sbjct: 453 DVYAVTSILNACAINGNLKSGKIVHDYIRE 482
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
S I + + GD A+ + Q D S+L A+ ++ G + +
Sbjct: 121 SRKIVEFCEVGDLKNAMELL--CSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIES 178
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G + ++ LV MY KCG L G VF+ +SE I +N +I G ++
Sbjct: 179 SGVMIDGILGVKLVFMYVKCGDLKEGRMVFDKLSESKIFLWNLMISEYSGSGNYGESINL 238
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
F+ ++E G+ P+ TFS++L V +GR++
Sbjct: 239 FKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQV 273
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 49/107 (45%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L + +E+H + D + +V +Y +L AR LFD P +
Sbjct: 560 ILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKD 619
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ W +I Y + ++A + F + T ++PD ++ I ACS
Sbjct: 620 LVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACS 666
>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 809
Score = 304 bits (778), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 181/550 (32%), Positives = 291/550 (52%), Gaps = 5/550 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
+N +L L++ L KE+H L+ K+ D F T L +YA + AR +FD
Sbjct: 136 YNFTYL-LKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKVFD 194
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R + WN+I+ Y+ A + + LKP T + A S +
Sbjct: 195 RMPERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRI 254
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +HG A+ +G ++ALV Y+K + A +FDG+ + ++V NSMI +
Sbjct: 255 GKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLKTARLLFDGMLERNVVSWNSMIDAYVQ 314
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+++ +F ML G P + +++G + + L G+ IH ++ D V
Sbjct: 315 NENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSV 374
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+SMY +C +++A +F L +V+W+A+I G++Q G +AL YF ++ +
Sbjct: 375 VNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTV 434
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D SV+ A A+ + IHG V+++ + +V V++ALVDMY+KCG + +
Sbjct: 435 KPDTFTYVSVITAIAELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARL 494
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ MSER++ T+N++I G G HG A E F ++ + + P+ TF +++ AC H GL
Sbjct: 495 IFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGL 554
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GA 480
V G + F M E Y I+ +HY MV LLG AG L EA+ FI + PV PAV+ GA
Sbjct: 555 VEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQM--PVKPAVNVYGA 612
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
+L C I+ N + AE VA +LFE +P G Y V+L+N Y W+ V ++R ++ GL
Sbjct: 613 MLGACQIHKNVNFAEKVAERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 672
Query: 541 RKEAGVSWVS 550
RK G S V
Sbjct: 673 RKTPGCSMVE 682
Score = 185 bits (469), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 206/399 (51%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL + + L+ K L ++ + TKLV L+ + A +F+ ++ L+ ++++
Sbjct: 49 SLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTMLK 108
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+A + A F + +++P + + + + C + ++L + +HG + SG
Sbjct: 109 GFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + L Y+K + EA KVFD + + DLV N++++G++ G +L++ + M
Sbjct: 169 DLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLMC 228
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
P T+V ++ + L+ +G+ IHG+ +++ FDS +++ LV MYA+C +
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSLK 288
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A +F+ + ++V+W+++I Y Q + +A+ F+K+ +G K V + L A A
Sbjct: 289 TARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G IH ++ + +V V ++L+ MY KC + +F + R I+++N+
Sbjct: 349 DLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTIVSWNA 408
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ILG +G +A +F + + + PD T+ +++ A
Sbjct: 409 MILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITA 447
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/312 (31%), Positives = 162/312 (51%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
S L LR + +GL ++ + + LV+ + + +DEA +VF+ + VL +M+
Sbjct: 48 SSLKELRHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDKKLNVLYYTML 107
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
GFA DK+L+ F M P Y L+ + + L VG+ IHG +KS F
Sbjct: 108 KGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ + L +MYA+C ++ A VF+ + DLV+W+ ++ GYSQ G AL +
Sbjct: 168 LDLFAMTGLENMYAKCRQVHEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVNLM 227
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ K + I SVL A + + G IHGY ++ GF+ V +++ALVDMY+KCG L
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIATALVDMYAKCGSL 287
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+F+ M ERN++++NS+I + +A F+ ++++G+ P + + L AC
Sbjct: 288 KTARLLFDGMLERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHAC 347
Query: 418 CHGGLVNDGREI 429
G + GR I
Sbjct: 348 ADLGDLERGRFI 359
>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
Length = 704
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 183/549 (33%), Positives = 288/549 (52%), Gaps = 1/549 (0%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
+ +N +L L+L + L R KE+H V + + F T +V +YA + A +
Sbjct: 29 VVYNFTYL-LKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQINDAYNM 87
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FD+ P+R + WN++I YA A L + +PD+ T I A ++ L
Sbjct: 88 FDRMPERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLL 147
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
VHG + +G S+ALV YSK + A +FDG+ +V NSMI G+
Sbjct: 148 RIGMAVHGYVLRAGFESLVNVSTALVDMYSKCGSVSIARVIFDGMDHRTVVSWNSMIDGY 207
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G + ++ +F ML G P T++G + + L G+ +H + DS
Sbjct: 208 VQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLKLDSDV 267
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + L+SMY++C ++ A +F +L + LV+W+A+I GY+Q G +AL F ++ +
Sbjct: 268 SVMNSLISMYSKCKRVDIAADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSR 327
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
K D + SV+ A A+ + IHG VI+ + +V V +ALVDMY+KCG +
Sbjct: 328 NIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTA 387
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++F+ M+ R++IT+N++I G G HG + E F+++ + + P++ TF L AC H
Sbjct: 388 RKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSHS 447
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV +G F M ++YGI+ +HY MV LLG AG L +A+ FI +P V GA
Sbjct: 448 GLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGA 507
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
+L C I+ N DL E A ++F+ +P G Y V+L+N YA W V K+R + +GL
Sbjct: 508 MLGACKIHKNVDLGEKAAFEIFKLNPDDGGYHVLLANIYATASMWGKVAKVRTIMEKSGL 567
Query: 541 RKEAGVSWV 549
+K G S V
Sbjct: 568 QKTPGCSLV 576
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 185/342 (54%)
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+++ YA + + A S F + ++P + + + + C +NSDL + +HG I SG
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + +V Y+K I++A +FD + + DLV N+MISG+A GF +L L
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PD T+V ++ + + LL +G +HG+ L++ F+S VS+ LV MY++C
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ A +F+ + H +V+W+++I GY Q GD A+ F+K+ +G + V + L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A ++ G +H V Q + V V ++L+ MYSKC + + +F+ + + +++
Sbjct: 241 ACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNLRNKTLVS 300
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+N++ILG +G +A F ++ + + PD T +++ A
Sbjct: 301 WNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPA 342
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 135/252 (53%)
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
M+ G+A D +L F M P Y L+ + S L G+ IHG + S
Sbjct: 1 MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
F + + +V+MYA+C +N AY++F+ + DLV W+ +I+GY+Q G AL
Sbjct: 61 FSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALMLVL 120
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+++ +G + D + I S+L A A + + G +HGYV++ GFE V VS+ALVDMYSKCG
Sbjct: 121 RMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSKCG 180
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + +F+ M R ++++NS+I G G A F+ ++++G+ P T L
Sbjct: 181 SVSIARVIFDGMDHRTVVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALH 240
Query: 416 ACCHGGLVNDGR 427
AC G + G+
Sbjct: 241 ACADLGDLERGK 252
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHGYVIQ 334
++ GY++ AL +F + M+ PV+ +L ++++ G IHG VI
Sbjct: 1 MLKGYAKSSSLDSALSFFSR--MKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVIT 58
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF ++ + +V+MY+KC + +F+ M ER+++ +N++I G +GF A
Sbjct: 59 SGFSWNLFAMTGVVNMYAKCRQINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALML 118
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ E+G PD T ++L A L+ G +
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAV 153
>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
Length = 1175
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 274/532 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + +LH+ + KA + D L+ LY + +A ++F+ + + +V LWN ++ A
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + + LF + ++P+ FTY CI R C+ ++ +H ++ +G D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +++A +V + + + D+V SMI+G+ +L F M +
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L ISG + + G IH S + + + LV++YARC +
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ F + H D +TW+ L++G++Q G + +AL F +++ G K + S L+A+A
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IH VI+ G V +AL+ +Y KCG F MSERN +++N++
Sbjct: 560 LAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTI 619
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + F + ++G+ P++ TF +L AC H GLV +G F M++EYG
Sbjct: 620 ITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYG 679
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + +HY ++ + G AG L+ A FI +P D V LLS C ++ N ++ E A
Sbjct: 680 IRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAA 739
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA +W + ++R + D G+RKE G SW+
Sbjct: 740 KHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIE 791
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 203/438 (46%), Gaps = 1/438 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K + F ++ LY A +F P R +N++I +A
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +F+ + + L PD T + + AC+ DL +H +G+ D I +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K ++ A+ +F+ ++VL N M+ F KS +LF M G P+
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++T ++ + +G+ IH +K+ F+S YVS VL+ MY++ + A V
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L D+V+W+++I GY Q AL F+++ G D + +AS ++ A +
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH + G+ V + +ALV++Y++CG + FE + ++ IT+N ++ G
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQ 524
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G +A + F + + G+ + TF + L A + + G++I R+ + G +TE
Sbjct: 525 SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETE 583
Query: 445 HYIYMVKLLGLAGNLEEA 462
++ L G G+ E+A
Sbjct: 584 VGNALISLYGKCGSFEDA 601
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 200/441 (45%), Gaps = 1/441 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA L + L+ LY+ N ++ AR +F++ R W +++ YA
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A L++ + R + P + + + +C++ R +H G + +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A++T Y + A +VF + D V N++ISG A CG + +L++F+ M G +P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D T+ L++ L G +H + K+ S + L+ +Y +C + +A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
NS ++V W+ ++ + Q D K+ F ++ G + + +L + +
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH ++ GFE + VS L+DMYSK G+L +V E + E++++++ S+I G
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
H A F+++ + G+ PD ++ + C + G +I R+ G
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDV 481
Query: 444 EHYIYMVKLLGLAGNLEEAYS 464
+ +V L G + EA+S
Sbjct: 482 SIWNALVNLYARCGRIREAFS 502
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L S + + + K++HA V K + L+ LY A++ F + +R+
Sbjct: 554 LSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNE 613
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
WN+II + + R +A LF + + +KP++ T+ + ACS
Sbjct: 614 VSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659
>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 1176
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 274/532 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + +LH+ + KA + D L+ LY + +A ++F+ + + +V LWN ++ A
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + + LF + ++P+ FTY CI R C+ ++ +H ++ +G D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +++A +V + + + D+V SMI+G+ +L F M +
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L ISG + + G IH S + + + LV++YARC +
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ F + H D +TW+ L++G++Q G + +AL F +++ G K + S L+A+A
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IH VI+ G V +AL+ +Y KCG F MSERN +++N++
Sbjct: 560 LAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTI 619
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + F + ++G+ P++ TF +L AC H GLV +G F M++EYG
Sbjct: 620 ITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYG 679
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + +HY ++ + G AG L+ A FI +P D V LLS C ++ N ++ E A
Sbjct: 680 IRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAA 739
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA +W + ++R + D G+RKE G SW+
Sbjct: 740 KHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIE 791
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 203/438 (46%), Gaps = 1/438 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K + F ++ LY A +F P R +N++I +A
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +F+ + + L PD T + + AC+ DL +H +G+ D I +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K ++ A+ +F+ ++VL N M+ F KS +LF M G P+
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++T ++ + +G+ IH +K+ F+S YVS VL+ MY++ + A V
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L D+V+W+++I GY Q AL F+++ G D + +AS ++ A +
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH + G+ V + +ALV++Y++CG + FE + ++ IT+N ++ G
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQ 524
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G +A + F + + G+ + TF + L A + + G++I R+ + G +TE
Sbjct: 525 SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETE 583
Query: 445 HYIYMVKLLGLAGNLEEA 462
++ L G G+ E+A
Sbjct: 584 VGNALISLYGKCGSFEDA 601
Score = 164 bits (416), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 200/441 (45%), Gaps = 1/441 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA L + L+ LY+ N ++ AR +F++ R W +++ YA
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A L++ + R + P + + + +C++ R +H G + +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A++T Y + A +VF + D V N++ISG A CG + +L++F+ M G +P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D T+ L++ L G +H + K+ S + L+ +Y +C + +A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
NS ++V W+ ++ + Q D K+ F ++ G + + +L + +
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH ++ GFE + VS L+DMYSK G+L +V E + E++++++ S+I G
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
H A F+++ + G+ PD ++ + C + G +I R+ G
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDV 481
Query: 444 EHYIYMVKLLGLAGNLEEAYS 464
+ +V L G + EA+S
Sbjct: 482 SIWNALVNLYARCGRIREAFS 502
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L S + + + K++HA V K + L+ LY A++ F + +R+
Sbjct: 554 LSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNE 613
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
WN+II + + R +A LF + + +KP++ T+ + ACS
Sbjct: 614 VSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659
>gi|449442687|ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 303 bits (776), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 185/573 (32%), Positives = 289/573 (50%), Gaps = 34/573 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNN--VLPSARILFDKTPQ 66
+L L ++ S+++ KE+HA + L+ D F ++LV A++ L + +
Sbjct: 57 LLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRF 125
+VF WN IR Y + +A L++N+LR PDN+TY + + C+ S
Sbjct: 117 LNVFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+ G I G D +A++ + A K+FD DLV NS+I+G+ CG
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D++ L+ M L PDE T++G++S + L++G+ +H + + +++
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296
Query: 246 LVSMYARCN-------------------------------CMNSAYHVFNSLFHPDLVTW 274
L+ MY +C + SA +FN + D+V W
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ALI G+ Q +AL F ++ D + + + L+A ++ + G +H YV +
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
H ++V + +ALVDMY+KCG + IQVFE M RN +T+ ++I GL LHG + A +
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F ++I GL PDE TF +L ACCHGGLV+ GR+ F +MT +YGI K +HY +V LLG
Sbjct: 477 FSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLG 536
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG LEEA I S+P D V GAL I+GN + E A +L E DP G V+
Sbjct: 537 RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVL 596
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
L+N Y + W+ K+R + + G+ K G S
Sbjct: 597 LANMYGDANMWEQARKVRKMMEERGVEKTPGCS 629
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 113/272 (41%), Gaps = 35/272 (12%)
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
L+ N ++S C K ++ M+ G D + L L++
Sbjct: 51 LIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVA---------------- 94
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
FC S + + DY +L N+ + ++ +W+ I GY + +
Sbjct: 95 FCAISEWRNLDYCDKIL-----------------NNAANLNVFSWNMAIRGYVESENPIN 137
Query: 290 ALYYFRKLNMQGKK-ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
A+ +R + +G D + A + W I G+VIQ GF+ + V +A++
Sbjct: 138 AVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAII 197
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+ CG L ++F+ R+++++NS+I G G +AF+ + + E + PDE
Sbjct: 198 HVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEV 257
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
T ++ A + GR++ + EE G+
Sbjct: 258 TMIGVVSASAQLENLALGRKLHQSI-EEMGLN 288
>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 919
Score = 303 bits (776), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 277/532 (52%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ K+LH+ + KA + D L+ LY V+ A +F + +V LWN ++ A
Sbjct: 260 LNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVA 319
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + LF ++ ++P+ FTY C+ R C+ ++ +H +I +G D
Sbjct: 320 YGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESD 379
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +D+A ++ + + D+V SMI+G+ F ++L+ F M
Sbjct: 380 MYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQL 439
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L IS + GQ IH S + + + + LV++YARC
Sbjct: 440 FGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKE 499
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ +F ++ H D +TW+ +++G++Q G Y +AL F K+ G K + S ++A+A
Sbjct: 500 AFSLFEAIEHKDKITWNGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASAN 559
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A++ G IH VI+ G V++AL+ +Y KCG + F MSERN +++N++
Sbjct: 560 LADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTI 619
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG+ +A + F + ++GL P++ TF +L AC H GLV +G F M+ E+G
Sbjct: 620 ITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLGYFKSMSSEHG 679
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I + +HY +V +LG AG L+ A F+ +P + V LLS C ++ N ++ E+ A
Sbjct: 680 IHPRPDHYACVVDILGRAGQLDRARKFVEEMPVSANAMVWRTLLSACRVHKNIEIGELAA 739
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA G+W +R + D G+RKE G SW+
Sbjct: 740 KYLLELEPHDSASYVLLSNAYAVTGKWACRDHVRKMMKDRGVRKEPGRSWIE 791
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 211/438 (48%), Gaps = 1/438 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA V K + L+ LY L A +F + P +N++I +A
Sbjct: 165 VHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGN 224
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +F+ + + PD T A + AC+ DL + +H + +G+ D I +
Sbjct: 225 GESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGS 284
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K +I EA+++F ++VL N M+ + KS LF M+ G P+
Sbjct: 285 LLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPN 344
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
E+T L+ +++G+ IH +K+ F+S YVS VL+ MY++ ++ A +
Sbjct: 345 EFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILE 404
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L D+V+W+++I GY Q +AL F+ + + G D + +AS ++A A +
Sbjct: 405 VLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQ 464
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH V G+ V + +ALV++Y++CG +FE + ++ IT+N ++ G
Sbjct: 465 GQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQ 524
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G +A E F + + G+ + TF + + A + + G++I + + G ++TE
Sbjct: 525 SGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKT-GCTSETE 583
Query: 445 HYIYMVKLLGLAGNLEEA 462
++ L G G++E+A
Sbjct: 584 VANALISLYGKCGSIEDA 601
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 204/441 (46%), Gaps = 1/441 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA L D L+ LYA ++ AR +F++ R W +++ YA
Sbjct: 64 IHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGL 123
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A L+ + + + P + + + AC++ + R VH G +++ +A
Sbjct: 124 GEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNA 183
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y + + A +VF + D V N++IS A CG + +L++F+ M G TPD
Sbjct: 184 LIALYLRFGSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPD 243
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+ L++ L+ G+ +H + LK+ + L+ +Y +C + A +F
Sbjct: 244 CVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFK 303
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S ++V W+ ++ Y Q D K+ F ++ G + + +L + +
Sbjct: 304 SGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINL 363
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH I+ GFE + VS L+DMYSK G+L ++ E + ++++++ S+I G
Sbjct: 364 GEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLDKARRILEVLEAKDVVSWTSMIAGYVQ 423
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
H F +A E F+D+ G+ PD ++ + AC + G++I +R+ G A
Sbjct: 424 HEFCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHSRVYVS-GYSADVS 482
Query: 445 HYIYMVKLLGLAGNLEEAYSF 465
+ +V L G +EA+S
Sbjct: 483 IWNALVNLYARCGRSKEAFSL 503
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 178/341 (52%), Gaps = 1/341 (0%)
Query: 90 SLFKNLLRTQLKPDNFTYACITRACSEN-SDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
SLF +R + +AC R C + P + +H AI GLG D I + L+
Sbjct: 27 SLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDL 86
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y+K L+ A +VF+ +S D V +M+SG+A G ++++ L+ M G P Y L
Sbjct: 87 YAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVL 146
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
++S + +L G+ +H K S V + L+++Y R ++ A VF+ + +
Sbjct: 147 SSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRFGSLSLAERVFSEMPY 206
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D VT++ LI+ ++Q G+ AL F ++ + G D V IAS+LAA A ++ G +
Sbjct: 207 CDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQL 266
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
H Y+++ G ++ +L+D+Y KCG + +++F++ N++ +N +++ G
Sbjct: 267 HSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDL 326
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++F+ F ++ G+ P+E T+ LL C + G +N G +I
Sbjct: 327 AKSFDLFCQMVAAGVRPNEFTYPCLLRTCTYAGEINLGEQI 367
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 103/210 (49%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++ + +++H+ V + D LV LYA A LF+ + WN ++
Sbjct: 460 KAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMV 519
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+A + + +A +F + + +K + FT+ A + +D+ + +H I +G
Sbjct: 520 SGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCT 579
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
++ ++AL++ Y K I++A F +S+ + V N++I+ + G+ ++L LFD M
Sbjct: 580 SETEVANALISLYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQM 639
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ G P++ T +G+++ L+ G G
Sbjct: 640 KQEGLKPNDVTFIGVLAACSHVGLVEEGLG 669
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 1/160 (0%)
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQHG 336
+TG+ D K L F Q + V A L S WP VIH I G
Sbjct: 13 LTGFLAHEDPEKLLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITCG 72
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ + L+D+Y+K G + +VFE +S R+ +++ +++ G +G +A +
Sbjct: 73 LGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLYH 132
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+ G+ P S++L AC L GR + ++ ++
Sbjct: 133 QMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQ 172
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 3 FNLHFLVLELSKSHQ--SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
+N+ V +S S + + K++HA V K + A L+ LY + A++
Sbjct: 545 YNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALISLYGKCGSIEDAKMQ 604
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
F + +R+ WN+II + + +A LF + + LKP++ T+ + ACS
Sbjct: 605 FFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVTFIGVLAACS----- 659
Query: 121 PGLRFVHGGAIVSGLG 136
H G + GLG
Sbjct: 660 ------HVGLVEEGLG 669
>gi|147798405|emb|CAN70142.1| hypothetical protein VITISV_032085 [Vitis vinifera]
Length = 748
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/568 (30%), Positives = 297/568 (52%), Gaps = 37/568 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQ 66
+L KS Q+L K++H+ + K L F +KL+ A++ L A +LF+ Q
Sbjct: 38 LLSTCKSFQNL---KQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSYALLLFESIEQ 94
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+ F+WN++IR +L+ A + +L ++P+++T+ + ++C++ + +
Sbjct: 95 PNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCAKVGATQEGKQI 154
Query: 127 HGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLI 155
HG + GL RD+++ +AL+T Y+ +
Sbjct: 155 HGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVSFTALITGYTLRGCL 214
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+A ++F+ + D V N+MI+G+A G ++++L F M R P+E T+V ++S
Sbjct: 215 DDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVAPNESTMVTVLSAC 274
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ L +G + + S + + L+ MY++C ++ A +F + D+++W+
Sbjct: 275 AQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKARDLFEGICEKDIISWN 334
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I GYS Y +AL FRK+ + + V S+L A A + G IH Y+ +
Sbjct: 335 VMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLGALDLGKWIHAYIDKK 394
Query: 336 GFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
L+ + ++L+DMY+KCG + QVF M +++ ++N++I GL +HG A E
Sbjct: 395 FLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMISGLAMHGHANMALEL 454
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
FR + ++G PD+ TF +L AC H GLV GR+ F+ M E+Y I K +HY M+ LLG
Sbjct: 455 FRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDISPKLQHYGCMIDLLG 514
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG +EA + + ++ D A+ G+LL C ++GN +L E A LFE +P V+
Sbjct: 515 RAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAKHLFELEPENPGAYVL 574
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
LSN YA GRWDDV ++R + D G++K
Sbjct: 575 LSNIYATAGRWDDVARIRTKLNDKGMKK 602
>gi|225443714|ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g18840-like [Vitis vinifera]
Length = 536
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 170/544 (31%), Positives = 281/544 (51%), Gaps = 42/544 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNN---VLPSARILFDKTP 65
+L ++ S+S + HA + K+ L+ F A++L+ + N+ +P A +F + P
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP 69
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ ++WN+IIRAYA + A ++F +L + PD +T+ ++C S + R
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG + +GLG D + L+ Y+ I++A + D + + D+V N+++S +A G
Sbjct: 130 IHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGL 189
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ + LFD M + + +S+++
Sbjct: 190 MELACHLFDEMT-----------------------------------ERNVESWNF---- 210
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
++S Y + A VF ++V+W+A+ITGYS G + + L F + G K D
Sbjct: 211 MISGYVGVGLLEEARRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPD 270
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ SVL+A A + G +H Y+ ++G + V++ALVDMYSKCG + ++VF
Sbjct: 271 NCTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFN 330
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ ++I T+NS+I GL HG A + F +++ +G P+E TF +L AC GL+++
Sbjct: 331 SCLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDE 390
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GRE+F M +GIQ EHY MV LLG G LEEA + +P+ V +LL C
Sbjct: 391 GREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGAC 450
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
+GN +LAE VA +L E P++ + V LSN YA GRW DVM++R + G+RK+ G
Sbjct: 451 RNHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPG 510
Query: 546 VSWV 549
S +
Sbjct: 511 CSMI 514
>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1183
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 177/532 (33%), Positives = 284/532 (53%), Gaps = 3/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ K +H V K + L+ Y + SA LFD+ + V WNS+I
Sbjct: 486 VKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMING 545
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + +F +L ++ D T + A + +L R +HG + + +
Sbjct: 546 CVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEE 605
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ S+ L+ YSK ++ A +VF + D +V S I+ + G + ++ LFD M
Sbjct: 606 VVFSNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQS 665
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD YT+ ++ S L G+ +H + +K+ S V++ L++MYA+C +
Sbjct: 666 KGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEE 725
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAA 317
A VF+ + D+V+W+ +I GYSQ +AL F L+MQ + K D + +A VL A A
Sbjct: 726 ARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELF--LDMQKQFKPDDITMACVLPACA 783
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G IHG++++ G+ + V+ ALVDMY+KCG L L +F+ + ++++I++
Sbjct: 784 GLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLAQLLFDMIPKKDLISWTV 843
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G G+HGF +A F ++ G+ PDES+FS +L AC H GL+N+G + F M E
Sbjct: 844 MIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHSGLLNEGWKFFNSMRNEC 903
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G++ K EHY +V LL GNL +AY FI S+P D + G LLS C I+ + LAE V
Sbjct: 904 GVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKV 963
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +FE +P Y V+L+N YAE +W++V KLR + G ++ G SW+
Sbjct: 964 AEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGFKQNPGCSWI 1015
Score = 225 bits (573), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 131/427 (30%), Positives = 229/427 (53%), Gaps = 1/427 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
N + VL+L +SL K +H+++ + D KLV +Y L R +FD
Sbjct: 369 LNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFD 428
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
K VFLWN ++ YA F ++ SLFK + + + + +T+ C+ + + +
Sbjct: 429 KIMNDKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKE 488
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ VHG + G G ++ ++L+ AY K ++ A +FD +S+PD+V NSMI+G
Sbjct: 489 CKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVV 548
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
GF L++F ML LG D TLV ++ LS+G+ +HGF +K+ F
Sbjct: 549 NGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVF 608
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
S+ L+ MY++C +N A VF + +V+W++ I Y ++G Y A+ F ++ +G
Sbjct: 609 SNTLLDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGV 668
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D + S++ A A S+++ G +H YVI++G ++ V++AL++MY+KCG +
Sbjct: 669 RPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARL 728
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF + ++I+++N++I G + +A E F D ++K PD+ T + +L AC
Sbjct: 729 VFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLD-MQKQFKPDDITMACVLPACAGLAA 787
Query: 423 VNDGREI 429
++ GREI
Sbjct: 788 LDKGREI 794
>gi|38567725|emb|CAE76014.1| B1358B12.23 [Oryza sativa Japonica Group]
Length = 918
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 280/528 (53%), Gaps = 4/528 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH KA + P + L +Y + ARILF + P++ + W S+I AY A
Sbjct: 237 LHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGH 296
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A LF + + L+PD +C+ ++ + G + H + G + +A
Sbjct: 297 AEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNA 356
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y+K +D A VF + D +SM+ + G K L+L+ M K
Sbjct: 357 LISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEF 416
Query: 205 EY---TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
EY +L+ +IS L +GQ H + +K V++ L+SMY RC + A
Sbjct: 417 EYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARK 476
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F + D+VTWSALI+ YS G AL + ++ +G K + + SV+++ A A
Sbjct: 477 IFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAA 536
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +IH +V G E + + +ALVDMY KCG LG+ ++F++M ER+++T+N +I G
Sbjct: 537 LEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISG 596
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G+HG QA + F + + P+ TF A+L ACCH GLV+ GRE+FTRM EEY ++
Sbjct: 597 YGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEP 655
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+HY MV LLG +G+L+EA + ++P D + G LL C ++ N ++ VA +
Sbjct: 656 NLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKA 715
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
F +DP Y +++SN+Y +W+++ KLRD + ++G+ K G S +
Sbjct: 716 FASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTI 763
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 186/381 (48%), Gaps = 7/381 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHAL + L P +A KLV Y+ + A + F +P FLWNS++R+ A
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--GRDSI-T 141
F S + + + +P FT + A +E LP VH ++ GL G S+
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-- 199
+S+LV Y++ + +A+++FD + + D+V ++ISG G + L M+R
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 200 --GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P+ T+ + LSVG +HGF +K+ V S L SMY +C+
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F L DLV+W++LI Y + G KA+ F + G + D V+I+ +LA
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A V G H +++ F SV++ +AL+ MY+KC + + VF + +R+ +++S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387
Query: 378 VILGLGLHGFTYQAFEFFRDI 398
+++ G + E +R++
Sbjct: 388 MVVAYCKAGLDLKCLELYREM 408
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +H+ V L D T LV +Y L AR +FD +R V WN +I
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
Y + A LF + R +KP++ T+ I AC
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC 632
>gi|225434871|ref|XP_002280683.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Vitis vinifera]
Length = 545
Score = 302 bits (773), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 272/542 (50%), Gaps = 31/542 (5%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
+++ ++L R + LHA + L R ++A KL+ Y L +AR LFDK P ++
Sbjct: 34 IDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNI 93
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
W + A A + +A S F + + L+P+ F I +AC SD +H
Sbjct: 94 RRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTV 153
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ + D+ SAL+ YSK +++A +VFD + D DLV+ N+M+SG+A GF ++
Sbjct: 154 ILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEA 213
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L L M + G P+ + LI+G S VS V M
Sbjct: 214 LNLVQKMQQAGVKPNVVSWNTLIAGF------------------SQVGDKSMVSEVFRLM 255
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
A PD+V+W+++I+G+ Q + F+++ QG V I
Sbjct: 256 TANG-------------VEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTI 302
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+S+L A AN+ G IHGY + G E V V SALVDMY+KCGY+ +F M E
Sbjct: 303 SSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPE 362
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN +T+NS+I G HG+ +A E F + E D TF+A+L AC H G+V G +
Sbjct: 363 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 422
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F +M E+Y I+ + EHY MV LLG AG L EAY I ++P D V GALL C +G
Sbjct: 423 FRKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 482
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N +LAE+ A LFE +P ++LSN YA+ GRW + K++ + K G SW+
Sbjct: 483 NIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 542
Query: 550 SG 551
Sbjct: 543 EA 544
>gi|115458828|ref|NP_001053014.1| Os04g0463800 [Oryza sativa Japonica Group]
gi|38347057|emb|CAE04357.2| OSJNBa0060P14.4 [Oryza sativa Japonica Group]
gi|113564585|dbj|BAF14928.1| Os04g0463800 [Oryza sativa Japonica Group]
Length = 767
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 175/529 (33%), Positives = 284/529 (53%), Gaps = 6/529 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH KA + P + L +Y + ARILF + P++ + W S+I AY A
Sbjct: 237 LHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGH 296
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A LF + + L+PD +C+ ++ + G + H + G + +A
Sbjct: 297 AEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNA 356
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y+K +D A VF + D +SM+ + G K L+L+ M K
Sbjct: 357 LISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEF 416
Query: 205 EY---TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
EY +L+ +IS L +GQ H + +K V++ L+SMY RC + A
Sbjct: 417 EYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARK 476
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F + D+VTWSALI+ YS G AL + ++ +G K + + SV+++ A A
Sbjct: 477 IFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAA 536
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +IH +V G E + + +ALVDMY KCG LG+ ++F++M ER+++T+N +I G
Sbjct: 537 LEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISG 596
Query: 382 LGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G+HG QA + F ++E+G + P+ TF A+L ACCH GLV+ GRE+FTRM EEY ++
Sbjct: 597 YGMHGEAIQALKLF-SMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLE 654
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+HY MV LLG +G+L+EA + ++P D + G LL C ++ N ++ VA +
Sbjct: 655 PNLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKK 714
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
F +DP Y +++SN+Y +W+++ KLRD + ++G+ K G S +
Sbjct: 715 AFASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTI 763
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 186/381 (48%), Gaps = 7/381 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHAL + L P +A KLV Y+ + A + F +P FLWNS++R+ A
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--GRDSIT- 141
F S + + + +P FT + A +E LP VH ++ GL G S+
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-- 199
+S+LV Y++ + +A+++FD + + D+V ++ISG G + L M+R
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 200 --GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P+ T+ + LSVG +HGF +K+ V S L SMY +C+
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F L DLV+W++LI Y + G KA+ F + G + D V+I+ +LA
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A V G H +++ F SV++ +AL+ MY+KC + + VF + +R+ +++S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387
Query: 378 VILGLGLHGFTYQAFEFFRDI 398
+++ G + E +R++
Sbjct: 388 MVVAYCKAGLDLKCLELYREM 408
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +H+ V L D T LV +Y L AR +FD +R V WN +I
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
Y + A LF + R +KP++ T+ I AC
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC 632
>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49170, chloroplastic-like [Cucumis sativus]
Length = 849
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 272/500 (54%), Gaps = 4/500 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L SA +F+K P+R+ W +I +A LF +++ + +PD FT + + A
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISA 280
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIKVFDGVSDPDL 170
C+ L + +H AI GL D L+ Y+K S+ + A K+FD + D ++
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 171 VLCNSMISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+MI+G+ G +D+ +L LF M+ P+ +T + + L +G+ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+K F S + V++ L+SMYAR ++ A F+ LF +L++++ +I Y++ + +
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL F ++ QG A AS+L+ AA + G IH VI+ G +L+ V +AL+
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALIS 520
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MYS+CG + QVFE M +RN+I++ S+I G HGF QA E F ++E+G+ P+E T
Sbjct: 521 MYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVT 580
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
+ A+L AC H GLVN+G + F M E+G+ + EHY +V +LG +G+L EA FI S+
Sbjct: 581 YIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSM 640
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P D V L C ++GN +L + A + E +P A ++LSN YA +WD+V
Sbjct: 641 PYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVS 700
Query: 530 KLRDDIVDNGLRKEAGVSWV 549
+R + + L KEAG SWV
Sbjct: 701 NIRKAMKEKXLIKEAGCSWV 720
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 212/447 (47%), Gaps = 8/447 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD-KTPQRSVFLWNSIIRAYALAH 83
+H + ++ L D L+ LY+ A +F R + W++++ +A +
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNN 147
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSITS 142
A F +++ P+ + +A TRACS + + G I +G L D
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVG 207
Query: 143 SALVTAYSK-LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
L+ + K + A KVF+ + + + V MI+ G+ +++ LF M+ G
Sbjct: 208 CGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGY 267
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC---MNS 258
PD +TL G+IS LL +GQ +H ++ V L++MYA+C+ M +
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ + ++ +W+A+ITGY Q+G Y +AL FR + + + +S L A A
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G + + ++ GF V+++L+ MY++ G + + F+ + E+N+I+YN+
Sbjct: 388 NLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNT 447
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
VI + + +A E F +I ++G+ TF++LL G + G +I R+ +
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS- 506
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYS 464
G++ ++ + GN+E A+
Sbjct: 507 GLKLNQSVCNALISMYSRCGNIESAFQ 533
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 172/355 (48%), Gaps = 7/355 (1%)
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + A S ++++ PD TY+ + C VH S L DS+T +
Sbjct: 46 RLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLN 105
Query: 144 ALVTAYSKLSLIDEAIKVFDGV-SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+L++ YSK ++A +F + S DL+ ++M+S FA+ ++L F M+ G
Sbjct: 106 SLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYY 165
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNC-MNSAY 260
P+EY +SVG I GF +K+ + D V L+ M+ + + SA+
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + VTW+ +IT Q G G+A+ F + G + D ++ V++A A
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANME 285
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC---GYLGLGIQVFETMSERNIITYNS 377
+ G +H I+HG L V L++MY+KC G + ++F+ + + N+ ++ +
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 378 VILG-LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+I G + G+ +A + FR +I + P+ TFS+ L AC + + G ++FT
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 138/289 (47%), Gaps = 18/289 (6%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
A L+ +YA + + AR FD ++++ +N++I AYA +A LF + +
Sbjct: 414 ANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
FT+A + + + +H I SGL + +AL++ YS+ I+ A +
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQ 533
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VF+ + D +++ S+I+GFA GF ++L+LF ML G P+E T + ++S L
Sbjct: 534 VFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGL 593
Query: 221 LSVGQGIHGFCLKSSFDSYDYVS-----SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTW 274
V +G F KS + + + + +V + R ++ A NS+ + D + W
Sbjct: 594 --VNEGWKHF--KSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVW 649
Query: 275 SALITGYSQQG--DYGKALYYFRKLNMQGKKADP---VLIASVLAAAAK 318
+ G + GK + K+ ++ + DP +L++++ A+ +K
Sbjct: 650 RTFLGACRVHGNLELGK---HAAKMIIEQEPHDPAAYILLSNLYASISK 695
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 117/252 (46%), Gaps = 3/252 (1%)
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G K++ + M+ G PD T + +G +H +S
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+S+Y++C A +F + DL++WSA+++ ++ +AL F + G
Sbjct: 105 NSLISLYSKCGQWEKATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKC-GYLGLG 360
+ A+ A + + V G I G+VI+ G+ + V V L+DM+ K G L
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VFE M ERN +T+ +I L G+ +A + F D+I G PD T S ++ AC +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANM 284
Query: 421 GLVNDGREIFTR 432
L+ G+++ ++
Sbjct: 285 ELLLLGQQLHSQ 296
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++ + +++HA V K+ L + L+ +Y+ + SA +F+ R+V W SII
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS-----------------ENSDL 120
+A A LF +L ++P+ TY + ACS E+ +
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 121 PGLRFVHGGAIVSGLGRDSITSSAL 145
P R H IV LGR S A+
Sbjct: 612 P--RMEHYACIVDILGRSGSLSEAI 634
>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 180/564 (31%), Positives = 301/564 (53%), Gaps = 23/564 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L+ + +HA + L + +T L +Y AR +FD+ P R
Sbjct: 22 LLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRMPSRD 81
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-----LKPDNFTYACITRACSENSDLPGL 123
WN+++ YA R S + ++R Q +PD+ T + AC++ L
Sbjct: 82 RVAWNAVVAGYA---RNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHAC 138
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R VH A+ +GL S+A++ AY K ++ A VFD + + V N+MI G+A
Sbjct: 139 REVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYADN 198
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G +++ LF M++ G + +++ + E L + +H ++ S V+
Sbjct: 199 GNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSVT 258
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDL-VTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++ YA+C + A VFN L + ++W+A+I G++Q A F ++ ++
Sbjct: 259 NALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLENV 318
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D + SV+ A A ++ IHGY I+H + V V +AL+DMYSKCG + + +
Sbjct: 319 RPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMYSKCGRVSIARR 378
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F++ +R++IT+N++I G G HGF A E F ++ G P+E+TF ++L AC H GL
Sbjct: 379 LFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGL 438
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GA 480
V++G++ F M ++YG++ EHY MV LLG AG L+EA+SFI ++ P++P +S GA
Sbjct: 439 VDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNM--PIEPGISVYGA 496
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
+L C ++ N +LAE A +FE P +G Y V+L+N YA W DV ++R + GL
Sbjct: 497 MLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARVRTAMEKKGL 556
Query: 541 RKEAGVSWV----------SGSSN 554
+K G S + SGS+N
Sbjct: 557 QKTPGWSIIQLKNEVHTFYSGSTN 580
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 168/351 (47%), Gaps = 8/351 (2%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
T+ + + C+ +DL R VH GL +SI S+AL Y K +A +VFD +
Sbjct: 18 TFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRVFDRM 77
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWML--RLGKTPDEYTLVGLISGLWEPSLLSV 223
D V N++++G+A G +++ M G+ PD TLV ++ + L
Sbjct: 78 PSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADARALHA 137
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
+ +H F L++ D VS+ ++ Y +C + +A VF+ + + V+W+A+I GY+
Sbjct: 138 CREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDCMPVRNSVSWNAMIDGYAD 197
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G+ +A+ F ++ +G + + L A + + +H +++ G +V V
Sbjct: 198 NGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLSSNVSV 257
Query: 344 SSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
++AL+ Y+KC L QVF E +++ I++N++ILG + A F + +
Sbjct: 258 TNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFARMQLEN 317
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
+ PD T +++ A + + + R Y I+ + + +Y++ L
Sbjct: 318 VRPDSFTLVSVIPA-----VADISDPLQARWIHGYSIRHQLDQDVYVLTAL 363
>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
Length = 748
Score = 302 bits (773), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 177/547 (32%), Positives = 287/547 (52%), Gaps = 3/547 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTP 65
F L ++ Q +LHA + LLR D F + LV Y + A FD+
Sbjct: 72 FTFPPLLRAAQGPGTAAQLHACALRLGLLRGDAFASGALVHAYLRFGRVRDAYRAFDEMR 131
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
R V WN+++ R +A LF ++ + D T + + C D
Sbjct: 132 HRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALA 191
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H A+ GL + +A++ Y KL +++E KVFDG+S DLV NS+ISG G
Sbjct: 192 MHLYAVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGMSSRDLVTWNSIISGHEQGGQ 251
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-S 244
++++F M G +PD TL+ L S + + + G+ +H + ++ +D D ++ +
Sbjct: 252 VASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGN 311
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM-QGKK 303
+V MYA+ + + +A +F+S+ D V+W+ LITGY Q G +A++ + + +G K
Sbjct: 312 AIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLK 371
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
SVL A + + G +H I+ G L V V + ++D+Y+KCG L + +
Sbjct: 372 PIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKCGKLDEAMLL 431
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
FE R+ +N+VI G+G+HG +A F + ++G++PD TF +LL AC H GLV
Sbjct: 432 FEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAGLV 491
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+ GR F M YGI+ +HY MV + G AG L++A+ FI ++P D A+ GALL
Sbjct: 492 DQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIKPDSAIWGALLG 551
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+GN ++ ++ + LFE DP+ Y V++SN YA+ G+WD V ++R + L+K
Sbjct: 552 ACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKT 611
Query: 544 AGVSWVS 550
G S +
Sbjct: 612 PGWSSIE 618
>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Vitis vinifera]
Length = 889
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 278/526 (52%), Gaps = 2/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L+ K + +D L+ +Y N L R +FDK R WN++I Y+
Sbjct: 238 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGL 297
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ ++ LF ++ Q KPD T I +AC DL ++VH I SG D+ S+
Sbjct: 298 YEESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 356
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K + + +VF G+ D V NSMI+ + G +D++++LF M++ PD
Sbjct: 357 LINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPD 415
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T V L+S + L +G+ +H K F+S VS+ LV MYA+C M + VF
Sbjct: 416 SVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFE 475
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
++ D++TW+ +I D L ++ +G D + S+L + A
Sbjct: 476 NMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 535
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IHG + + G E V V + L++MYSKCG L QVF+ M ++++T+ ++I G+
Sbjct: 536 GKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGM 595
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+G +A F ++ G+ PD F A++ AC H GLV +G F RM ++Y I+ + E
Sbjct: 596 YGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIE 655
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY +V LL + L++A FI S+P D ++ GALLS C + G++++AE V+ ++ E
Sbjct: 656 HYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIEL 715
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+P Y V++SN YA G+WD V +R I GL+K+ G SW+
Sbjct: 716 NPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWME 761
Score = 195 bits (495), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 121/416 (29%), Positives = 216/416 (51%), Gaps = 3/416 (0%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWN 73
S + ++ +LH+L+ L ++ KL+ YA + S + +P +V+LWN
Sbjct: 25 SAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWN 84
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
SIIRA F++A SL+ R +L+PD +T+ + AC+ D + +H +
Sbjct: 85 SIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDM 144
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G G D +AL+ Y + + +D+A KVF+ + D+V NS+ISG+ G+W+++L+++
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
LG PD YT+ ++ + G IHG K V++ L+SMY +
Sbjct: 205 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 264
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
N + +F+ + D V+W+ +I GYSQ G Y +++ F ++ Q K D + I S+L
Sbjct: 265 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-KPDLLTITSIL 323
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A ++ G +H Y+I G+E S+ L++MY+KCG L +VF M ++ +
Sbjct: 324 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 383
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++NS+I +G +A + F+ +++ + PD T+ LL G ++ G+E+
Sbjct: 384 SWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLHLGKEL 438
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 151/378 (39%), Gaps = 25/378 (6%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+ ++L +S L KELH +AK + + LV +YA + + +F+
Sbjct: 419 YVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK 478
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
R + WN+II + + N + + + PD T I CS + +
Sbjct: 479 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 538
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG GL D + L+ YSK + + +VF + D+V ++IS G
Sbjct: 539 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 598
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
K+++ F M G PD V +I SGL E L + + ++ + Y
Sbjct: 599 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHY- 657
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ +V + +R ++ A S+ PD W AL++ GD A +++
Sbjct: 658 ---ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIA----ERVSE 710
Query: 300 QGKKADP------VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
+ + +P VL++++ AA K V I + G + S +++ +K
Sbjct: 711 RIIELNPDDTGYYVLVSNIYAALGKWDQVRS---IRKSIKARGLKKDPGCS--WMEIQNK 765
Query: 354 CGYLGLGIQVFETMSERN 371
G G + FE E N
Sbjct: 766 VYVFGTGTKFFEQFEEVN 783
>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
Length = 1321
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/542 (34%), Positives = 273/542 (50%), Gaps = 31/542 (5%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
+++ ++L R + LHA + L R ++A KL+ Y L +AR LFDK P ++
Sbjct: 810 IDMYARDRALYRGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNI 869
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
W + A A + +A S F + + L+P+ F I +AC SD +H
Sbjct: 870 RRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTV 929
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ + D+ SAL+ YSK +++A +VFD + D DLV+ N+M+SG+A GF ++
Sbjct: 930 ILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEA 989
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L L M + G P+ + LI+G S VS V M
Sbjct: 990 LBLVQKMQQAGVKPNVVSWNTLIAGF------------------SQVGDKSMVSEVFRLM 1031
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
A + PD+V+W+++I+G+ Q + F+++ QG V I
Sbjct: 1032 TA-------------NGVEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTI 1078
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+S+L A AN+ G IHGY + G E V V SALVDMY+KCGY+ +F M E
Sbjct: 1079 SSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPE 1138
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN +T+NS+I G HG+ +A E F + E D TF+A+L AC H G+V G +
Sbjct: 1139 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESL 1198
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F +M E+Y I+ + EHY MV LLG AG L EAY I ++P D V GALL C +G
Sbjct: 1199 FXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N +LAE+ A LFE +P ++LSN YA+ GRW + K++ + K G SW+
Sbjct: 1259 NIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 1318
Query: 550 SG 551
Sbjct: 1319 EA 1320
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 151/528 (28%), Positives = 256/528 (48%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ H V K L D F T L+ +YA + SA ++DK N +I AYA
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARN 192
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F A +F + +P+++TY+ + C S + + +H + ++
Sbjct: 193 GFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVG 252
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+T YSK +++EA VF+ + +++ + I+GF G + K+L+ F M G
Sbjct: 253 NALLTLYSKCGMMEEAEIVFESLRQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+E+T +++ G+ H +K S +V + ++ MY+ M+ A
Sbjct: 313 PNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQ 372
Query: 263 FNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F + V+W+ALI GY KA+ F ++ + + +++ A + +
Sbjct: 373 FKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDVACNEFTYSNIFKACSSFPS 432
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ IH +I+ E ++ V+S+L++ Y++CG L +QVF +S+ +++++NS+I
Sbjct: 433 LATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDADVVSWNSIIKA 492
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G ++A R +IE+G P TF +L AC H GLV +G+E F M ++Y IQ
Sbjct: 493 YSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQP 552
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+ H MV +LG AG LE A FI L ++ LL+ C N +AE VA ++
Sbjct: 553 EETHCSCMVDILGRAGQLENALDFIKKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKI 612
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ +P V LSN YAE GRW D R + + KE G SW+
Sbjct: 613 LDLEPNDATVYVTLSNMYAEVGRWADAENQRRLMEQKEISKEPGCSWI 660
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 183/395 (46%), Gaps = 5/395 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++ K+LHA V K L + L+ LY+ ++ A I+F+ QR++ W + I
Sbjct: 229 AIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASIN 288
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ F A F + + ++P+ FT++ + +C D R H I G+
Sbjct: 289 GFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMAS 348
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+A++ YS L +DEA K F + V N++I+G+ +K+++ F M
Sbjct: 349 GVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRM 408
Query: 197 LRLGKTPDEYTLVGLISGLWE-PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
++ +E+T + PSL + Q IH +KS+ +S +V+S L+ Y +C
Sbjct: 409 VKEDVACNEFTYSNIFKACSSFPSLATTVQ-IHSRLIKSNVESNLHVASSLIEAYTQCGS 467
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ +A VF + D+V+W+++I YSQ GD KA++ RK+ +G K +VL+A
Sbjct: 468 LENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSA 527
Query: 316 AAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+ S V G ++Q + + S +VD+ + G L + + ++ + +
Sbjct: 528 CSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKLTMKPTAS 587
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
+L + Q E+ + I L P+++T
Sbjct: 588 IWRPLLAACRYNSNLQMAEYVAEKI-LDLEPNDAT 621
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 124/238 (52%), Gaps = 2/238 (0%)
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P + +S + +G+ H F +K S ++V + L+ MYA+C ++SA
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
V++ + D T + LI+ Y++ G + +A F ++ G + + +++LA
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ + G +H +V++ + V +AL+ +YSKCG + VFE++ +RNII++ + I
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFESLRQRNIISWTASI 287
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREIFTRMTEE 436
G HG +A + F + E G+ P+E TFS +L +C C + DGR T++ ++
Sbjct: 288 NGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFI-DGRMFHTQVIKK 344
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+ + S SL+ T ++H+ + K+++ + A+ L+ Y L +A +F +
Sbjct: 423 IFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIEAYTQCGSLENAVQVFTQISDAD 482
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V WNSII+AY+ A L + ++ KP + T+ + ACS
Sbjct: 483 VVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACS 529
>gi|222629009|gb|EEE61141.1| hypothetical protein OsJ_15084 [Oryza sativa Japonica Group]
Length = 897
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 173/528 (32%), Positives = 280/528 (53%), Gaps = 4/528 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH KA + P + L +Y + ARILF + P++ + W S+I AY A
Sbjct: 237 LHGFGVKAGVGHCPSVVSSLFSMYTKCDSTEDARILFPELPEKDLVSWTSLIGAYCRAGH 296
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A LF + + L+PD +C+ ++ + G + H + G + +A
Sbjct: 297 AEKAVELFLGMEESGLQPDEVVISCLLAGLGNDAKVRGGKTFHAAIVRRNFGDSVLIGNA 356
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y+K +D A VF + D +SM+ + G K L+L+ M K
Sbjct: 357 LISMYAKCKQVDIAATVFRMLHQRDTDSWSSMVVAYCKAGLDLKCLELYREMQFRDKDEF 416
Query: 205 EY---TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
EY +L+ +IS L +GQ H + +K V++ L+SMY RC + A
Sbjct: 417 EYDTNSLISIISSCSRLGRLRLGQSAHCYSIKHLAGENSSVANALISMYGRCGNFDVARK 476
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F + D+VTWSALI+ YS G AL + ++ +G K + + SV+++ A A
Sbjct: 477 IFGMVKTKDVVTWSALISSYSHLGHSKDALLLYDQMLTEGVKPNSATLVSVISSCANLAA 536
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +IH +V G E + + +ALVDMY KCG LG+ ++F++M ER+++T+N +I G
Sbjct: 537 LEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMISG 596
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G+HG QA + F + + P+ TF A+L ACCH GLV+ GRE+FTRM EEY ++
Sbjct: 597 YGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSACCHAGLVDKGRELFTRM-EEYSLEP 655
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+HY MV LLG +G+L+EA + ++P D + G LL C ++ N ++ VA +
Sbjct: 656 NLKHYACMVDLLGKSGHLQEAEDVVSAMPIEPDGGIWGTLLGACKMHDNFEMGLRVAKKA 715
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
F +DP Y +++SN+Y +W+++ KLRD + ++G+ K G S +
Sbjct: 716 FASDPENDGYYILMSNSYGSAEKWNEIEKLRDMMKNHGVEKSIGWSTI 763
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 186/381 (48%), Gaps = 7/381 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHAL + L P +A KLV Y+ + A + F +P FLWNS++R+ A
Sbjct: 28 LHALAVTSGLSPRPDFAAKLVSAYSSAGLPALAALAFAASPCPDAFLWNSLLRSRHRASD 87
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--GRDSIT- 141
F S + + + +P FT + A +E LP VH ++ GL G S+
Sbjct: 88 FASTLSAHRRMRASGARPSRFTAPLVASAAAELGALPVGAAVHAYSVRFGLLEGDGSVAV 147
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-- 199
+S+LV Y++ + +A+++FD + + D+V ++ISG G + L M+R
Sbjct: 148 ASSLVYMYARCGSVRDAVRLFDEMPERDVVAWTAVISGCVCNGQCGEGLSYLVRMVRSAG 207
Query: 200 --GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P+ T+ + LSVG +HGF +K+ V S L SMY +C+
Sbjct: 208 DGGARPNSRTMESGLEACGVLGELSVGTCLHGFGVKAGVGHCPSVVSSLFSMYTKCDSTE 267
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F L DLV+W++LI Y + G KA+ F + G + D V+I+ +LA
Sbjct: 268 DARILFPELPEKDLVSWTSLIGAYCRAGHAEKAVELFLGMEESGLQPDEVVISCLLAGLG 327
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A V G H +++ F SV++ +AL+ MY+KC + + VF + +R+ +++S
Sbjct: 328 NDAKVRGGKTFHAAIVRRNFGDSVLIGNALISMYAKCKQVDIAATVFRMLHQRDTDSWSS 387
Query: 378 VILGLGLHGFTYQAFEFFRDI 398
+++ G + E +R++
Sbjct: 388 MVVAYCKAGLDLKCLELYREM 408
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +H+ V L D T LV +Y L AR +FD +R V WN +I
Sbjct: 536 ALEHGELIHSHVKDVGLECDLSICTALVDMYMKCGQLGIARKMFDSMLERDVVTWNVMIS 595
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
Y + A LF + R +KP++ T+ I AC
Sbjct: 596 GYGMHGEAIQALKLFSMMERGNVKPNSLTFLAILSAC 632
>gi|225456517|ref|XP_002281018.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 624
Score = 301 bits (772), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 301/542 (55%), Gaps = 10/542 (1%)
Query: 17 QSLSRTKELHALVAKA---SLLRDPFYATKLVRLYAL--NNVLPSARILFDKTPQRSVFL 71
Q+LS + + +++ A + RDP ++KL+ Y+L ++ +R LF + + +VF
Sbjct: 36 QNLSHPRSFNQILSHAIASGVFRDPVVSSKLL-YYSLSHDHDFAFSRTLFFQIHKPNVFS 94
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WN + RAY+ + + +L+ +LR PDN+++ + +AC+ S L R +H +
Sbjct: 95 WNFMFRAYSRSSFPAETIALYNLMLRNGTLPDNYSFPFVLKACARLSLLHKGREIHSSTL 154
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD--PDLVLCNSMISGFAHCGFWDKS 189
G+ D +AL++A+S ++ A VFD + D+V NSMISG+ ++ +
Sbjct: 155 KLGVHLDVFVQNALISAFSSCGAVEAARAVFDMLPALVRDVVSWNSMISGYLQSHRYELA 214
Query: 190 LQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L++F +L G +PDE TLV +S LL +G+ IHG S F +V S L+
Sbjct: 215 LKVFWELLGDGSLSPDEVTLVSALSVCGRLGLLDLGKKIHGLFTGSGFVLDVFVGSSLID 274
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C + A VF+ + H + V W+++I GY+Q + +A+ FR++ + G AD
Sbjct: 275 MYSKCGQIEDARKVFDRIPHRNTVCWTSMIAGYAQSDLFKEAIELFREMQIGGFAADAAT 334
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
IA VL+A + G IH Y ++ E+ + +AL+ MYSKCG + +++F ++
Sbjct: 335 IACVLSACGHWGALAQGRWIHLYCERNSIEMDLNARNALIGMYSKCGDIQKALEIFHGLT 394
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDI-IEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ +I ++++VI GL ++G + +A F + + + P+E TF +LCAC HGG V+ G
Sbjct: 395 QPDIFSWSAVISGLAMNGESDKALHLFSQMEMISDIRPNEITFLGVLCACNHGGFVDKGL 454
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F MT+ Y + EHY MV LLG A L EA FI +LP D + +LL C
Sbjct: 455 YYFNAMTQIYNLTPGIEHYGCMVDLLGRANLLVEAEKFIRTLPIQPDVVIWRSLLFACRN 514
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+GN +LAE A Q+ E +PR+ +V+LSN YA RW DV ++R D+ ++K+ G S
Sbjct: 515 HGNIELAEFAAKQIEELEPRRCGARVLLSNVYASASRWGDVKRVRKDMATQRIKKQPGCS 574
Query: 548 WV 549
+V
Sbjct: 575 FV 576
>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic [Vitis vinifera]
gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 301 bits (771), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 295/547 (53%), Gaps = 8/547 (1%)
Query: 12 LSKSHQSLSRT-------KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
L++ H S+ R +++HA + + L + F + L+ Y +L A+ +F T
Sbjct: 23 LAQPHASILRKLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHT 82
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P ++V W +I A F +A +F+ ++ KP+ T + + A + + +
Sbjct: 83 PYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAK 142
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH + G + +ALV YSK + A ++F+ +S+ ++V N+++SG++ G
Sbjct: 143 SVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHG 202
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
F ++++ LF+ M R G D YT++ LI L VG GIHGF +++ +++ ++ +
Sbjct: 203 FSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKT 262
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKK 303
L+ +Y NC++ A+ VF+ + D+ W+ ++TG+S + +A+ +F K L +Q K
Sbjct: 263 ALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLK 322
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D + + +L++ + S + G +H I+ F ++ V SA++DMY+ CG L +
Sbjct: 323 LDSIALMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRF 382
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F M E++++ +N++I G G++G+ A + F + GL+PDESTF ++L AC H G+V
Sbjct: 383 FYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMV 442
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+G +IF M + + +HY ++ +LG AG L+ AYSFI ++P D V LL
Sbjct: 443 YEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLG 502
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+GN L ++ ++FE +P Y V+LSN YA G W+ V R + ++K+
Sbjct: 503 ACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGVKMTRASLRSKRMKKD 562
Query: 544 AGVSWVS 550
G S +
Sbjct: 563 PGFSSIE 569
>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Cucumis sativus]
Length = 849
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 169/500 (33%), Positives = 270/500 (54%), Gaps = 4/500 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L SA +F+K P+R+ W +I +A LF ++ + +PD FT + + A
Sbjct: 221 LVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISA 280
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIKVFDGVSDPDL 170
C+ L + +H AI GL D L+ Y+K S+ + A K+FD + D ++
Sbjct: 281 CANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNV 340
Query: 171 VLCNSMISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+MI+G+ G +D+ +L LF M+ P+ +T + + L +G+ +
Sbjct: 341 FSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+K F S + V++ L+SMYAR ++ A F+ LF +L++++ +I Y++ + +
Sbjct: 401 HAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEE 460
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL F ++ QG A AS+L+ AA + G IH VI+ G +L+ V +AL+
Sbjct: 461 ALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALIS 520
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MYS+CG + QVFE M +RN+I++ S+I G HGF QA E F ++E+G+ P+ T
Sbjct: 521 MYSRCGNIESAFQVFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVT 580
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
+ A+L AC H GLVN+G + F M E+G+ + EHY MV +LG +G+L EA FI S+
Sbjct: 581 YIAVLSACSHVGLVNEGWKHFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSM 640
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P D V L C ++GN +L + A + E +P A ++LSN YA +WD+V
Sbjct: 641 PYKADALVWRTFLGACRVHGNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVS 700
Query: 530 KLRDDIVDNGLRKEAGVSWV 549
+R + + L KEAG SWV
Sbjct: 701 NIRKAMKEKNLIKEAGCSWV 720
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 212/447 (47%), Gaps = 8/447 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD-KTPQRSVFLWNSIIRAYALAH 83
+H + ++ L D L+ LY+ A +F R + W++++ +A +
Sbjct: 88 VHEKLTQSDLQLDSVTLNSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNN 147
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSITS 142
A F +++ P+ + +A TRACS + + G + +G L D
Sbjct: 148 MGFRALLTFVDMIENGYYPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVG 207
Query: 143 SALVTAYSK-LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
L+ + K + A KVF+ + + + V MI+ G+ +++ LF M+ G
Sbjct: 208 CGLIDMFVKGRGDLVSAFKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGY 267
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC---MNS 258
PD +TL G+IS LL +GQ +H ++ V L++MYA+C+ M +
Sbjct: 268 EPDRFTLSGVISACANMELLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCA 327
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ + ++ +W+A+ITGY Q+G Y +AL FR + + + +S L A A
Sbjct: 328 ARKIFDQILDHNVFSWTAMITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACA 387
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G + + ++ GF V+++L+ MY++ G + + F+ + E+N+I+YN+
Sbjct: 388 NLAALRIGEQVFTHAVKLGFSSVNCVANSLISMYARSGRIDDARKAFDILFEKNLISYNT 447
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
VI + + +A E F +I ++G+ TF++LL G + G +I R+ +
Sbjct: 448 VIDAYAKNLNSEEALELFNEIEDQGMGASAFTFASLLSGAASIGTIGKGEQIHARVIKS- 506
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYS 464
G++ ++ + GN+E A+
Sbjct: 507 GLKLNQSVCNALISMYSRCGNIESAFQ 533
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/355 (27%), Positives = 174/355 (49%), Gaps = 7/355 (1%)
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + A S ++++ PD TY+ + C VH S L DS+T +
Sbjct: 46 RLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLN 105
Query: 144 ALVTAYSKLSLIDEAIKVFDGV-SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+L++ YSK ++A +F + S DL+ ++M+S FA+ ++L F M+ G
Sbjct: 106 SLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYY 165
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNC-MNSAY 260
P+EY +SVG I GF +K+ + D V L+ M+ + + SA+
Sbjct: 166 PNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAF 225
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + VTW+ +IT Q G G+A+ F ++ + G + D ++ V++A A
Sbjct: 226 KVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANME 285
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC---GYLGLGIQVFETMSERNIITYNS 377
+ G +H I+HG L V L++MY+KC G + ++F+ + + N+ ++ +
Sbjct: 286 LLLLGQQLHSQAIRHGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTA 345
Query: 378 VILG-LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+I G + G+ +A + FR +I + P+ TFS+ L AC + + G ++FT
Sbjct: 346 MITGYVQKGGYDEEALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFT 400
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 137/289 (47%), Gaps = 18/289 (6%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
A L+ +YA + + AR FD ++++ +N++I AYA +A LF + +
Sbjct: 414 ANSLISMYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGM 473
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
FT+A + + + +H I SGL + +AL++ YS+ I+ A +
Sbjct: 474 GASAFTFASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQ 533
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VF+ + D +++ S+I+GFA GF ++L+LF ML G P+ T + ++S L
Sbjct: 534 VFEDMEDRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGL 593
Query: 221 LSVGQGIHGFCLKSSFDSYDYVS-----SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTW 274
V +G F KS + + + + +V + R ++ A NS+ + D + W
Sbjct: 594 --VNEGWKHF--KSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVW 649
Query: 275 SALITGYSQQG--DYGKALYYFRKLNMQGKKADP---VLIASVLAAAAK 318
+ G + GK + K+ ++ + DP +L++++ A+ +K
Sbjct: 650 RTFLGACRVHGNLELGK---HAAKMIIEQEPHDPAAYILLSNLYASTSK 695
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 117/252 (46%), Gaps = 3/252 (1%)
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G K++ + M+ G PD T + +G +H +S
Sbjct: 45 GRLHKAISTLEHMVHQGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTL 104
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+S+Y++C A +F + DL++WSA+++ ++ +AL F + G
Sbjct: 105 NSLISLYSKCGQWEKATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGY 164
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKC-GYLGLG 360
+ A+ A + + V G I G+V++ G+ + V V L+DM+ K G L
Sbjct: 165 YPNEYCFAAATRACSTAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSA 224
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VFE M ERN +T+ +I L G+ +A + F ++I G PD T S ++ AC +
Sbjct: 225 FKVFEKMPERNAVTWTLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANM 284
Query: 421 GLVNDGREIFTR 432
L+ G+++ ++
Sbjct: 285 ELLLLGQQLHSQ 296
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 19/145 (13%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++ + +++HA V K+ L + L+ +Y+ + SA +F+ R+V W SII
Sbjct: 492 TIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDMEDRNVISWTSIIT 551
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS-----------------ENSDL 120
+A A LF +L ++P+ TY + ACS E+ +
Sbjct: 552 GFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWKHFKSMYTEHGVI 611
Query: 121 PGLRFVHGGAIVSGLGRDSITSSAL 145
P R H +V LGR S A+
Sbjct: 612 P--RMEHYACMVDILGRSGSLSEAI 634
>gi|449476227|ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 301 bits (771), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 184/573 (32%), Positives = 288/573 (50%), Gaps = 34/573 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNN--VLPSARILFDKTPQ 66
+L L ++ S+++ KE+HA + L+ D F ++LV A++ L + +
Sbjct: 57 LLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVAFCAISEWRNLDYCDKILNNAAN 116
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRF 125
+ F WN IR Y + +A L++N+LR PDN+TY + + C+ S
Sbjct: 117 LNXFSWNMAIRGYVESENPINAVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANE 176
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+ G I G D +A++ + A K+FD DLV NS+I+G+ CG
Sbjct: 177 ILGHVIQLGFDSDLFVHNAIIHVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGL 236
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D++ L+ M L PDE T++G++S + L++G+ +H + + +++
Sbjct: 237 ADEAFDLYYKMGELNVMPDEVTMIGVVSASAQLENLALGRKLHQSIEEMGLNLTVPLANA 296
Query: 246 LVSMYARCN-------------------------------CMNSAYHVFNSLFHPDLVTW 274
L+ MY +C + SA +FN + D+V W
Sbjct: 297 LMDMYIKCKNIEAAKILFENMTKKTVVSWTTMVIGYAKFGLLESAVRLFNEMPEKDVVLW 356
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ALI G+ Q +AL F ++ D + + + L+A ++ + G +H YV +
Sbjct: 357 NALIGGFVQAKRSKEALALFHEMQASSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDK 416
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
H ++V + +ALVDMY+KCG + IQVFE M RN +T+ ++I GL LHG + A +
Sbjct: 417 HNLTMNVALGTALVDMYAKCGNIKKAIQVFEEMPGRNSLTWTAIICGLALHGQPHAAISY 476
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F ++I GL PDE TF +L ACCHGGLV+ GR+ F +MT +YGI K +HY +V LLG
Sbjct: 477 FSEMISIGLVPDEITFIGVLSACCHGGLVDQGRDYFYQMTSKYGISPKLKHYSCLVDLLG 536
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG LEEA I S+P D V GAL I+GN + E A +L E DP G V+
Sbjct: 537 RAGFLEEAEELIRSMPFEPDAVVWGALFFGSRIHGNVHMGERAASKLLELDPHDGGIYVL 596
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
L+N Y + W+ K+R + + G+ K G S
Sbjct: 597 LANMYGDANMWEQARKVRKMMEERGVEKTPGCS 629
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 112/272 (41%), Gaps = 35/272 (12%)
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
L+ N ++S C K ++ M+ G D + L L++
Sbjct: 51 LIQSNPLLSLLEACTSMAKMKEIHAQMISTGLISDGFALSRLVA---------------- 94
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
FC S + + DY +L N+ + + +W+ I GY + +
Sbjct: 95 FCAISEWRNLDYCDKIL-----------------NNAANLNXFSWNMAIRGYVESENPIN 137
Query: 290 ALYYFRKLNMQGKK-ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
A+ +R + +G D + A + W I G+VIQ GF+ + V +A++
Sbjct: 138 AVLLYRNMLRKGSAIPDNYTYPLLFKVCAGFSLSWTANEILGHVIQLGFDSDLFVHNAII 197
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+ CG L ++F+ R+++++NS+I G G +AF+ + + E + PDE
Sbjct: 198 HVLVSCGELLAARKLFDESCVRDLVSWNSIINGYVRCGLADEAFDLYYKMGELNVMPDEV 257
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
T ++ A + GR++ + EE G+
Sbjct: 258 TMIGVVSASAQLENLALGRKLHQSI-EEMGLN 288
>gi|297814636|ref|XP_002875201.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297814638|ref|XP_002875202.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321039|gb|EFH51460.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321040|gb|EFH51461.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 708
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 175/533 (32%), Positives = 286/533 (53%), Gaps = 4/533 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q L K++H + K D T L+ +YA + S+ +F+ R+V W S+I
Sbjct: 168 QDLDNGKKIHCQIVKVPSF-DNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMI 226
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y + + LF + + + +TY + AC++ L ++ HG I SG+
Sbjct: 227 AGYVKNDLYEEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIE 286
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S ++L+ Y K I A +VF+ S DLV+ +MI G+ H G +++L LF M
Sbjct: 287 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 346
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+G P+ T+ ++SG L +G+ IHG +K + V++ LV MYA+C
Sbjct: 347 SGVGIKPNCVTIASVLSGCGLVGNLELGRSIHGLSIKVGIWDTN-VANALVHMYAKCYQN 405
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +VF D+V W+++I+G+SQ G +AL+ F ++N + + V +AS+ +A
Sbjct: 406 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSAC 465
Query: 317 AKSANVWPGAVIHGYVIQHGF--ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A ++ G+ +H Y ++ GF SV V +AL+D Y+KCG +F+T+ E+N IT
Sbjct: 466 ASLGSLAIGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDAESARLIFDTIEEKNTIT 525
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++++I G G G T + E F ++++K P+ESTF+++L AC H G+VN+G++ F+ M
Sbjct: 526 WSAMIGGYGKQGDTKGSLELFEEMLKKQQKPNESTFTSVLSACSHTGMVNEGKKYFSSMY 585
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++Y T+HY MV +L AG LE+A I +P D GA L C ++ DL
Sbjct: 586 KDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLG 645
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
EIV ++ + P +Y V++SN YA DGRW ++R+ + GL K AG S
Sbjct: 646 EIVIKKMLDLHPDDASYYVLVSNLYASDGRWSQAKEVRNLMKQRGLSKIAGHS 698
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 209/411 (50%), Gaps = 5/411 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
FL+L + SL ++ H ++ L+ D ATKLV LY AR++FD+ P+
Sbjct: 60 FLLLSKCTNIDSL---RQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPE 116
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+LW I+R Y L + + + L++ D+ ++ +AC+E DL + +
Sbjct: 117 PDFYLWKVILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKI 176
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H IV D++ + L+ Y+K I + KVF+ ++ ++V SMI+G+ +
Sbjct: 177 H-CQIVKVPSFDNVVLTGLLDMYAKCGEIKSSYKVFEDITLRNVVCWTSMIAGYVKNDLY 235
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ L LF+ M +EYT L+ + L G+ HG +KS + + + L
Sbjct: 236 EEGLVLFNRMRENSVLGNEYTYGTLVMACTKLRALHQGKWFHGCLIKSGIELSSCLVTSL 295
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY +C +++A VFN H DLV W+A+I GY+ G +AL F+K++ G K +
Sbjct: 296 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMSGVGIKPNC 355
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V IASVL+ N+ G IHG I+ G V++ALV MY+KC VFE
Sbjct: 356 VTIASVLSGCGLVGNLELGRSIHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 414
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
SE++I+ +NS+I G +G ++A F + + + P+ T ++L AC
Sbjct: 415 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNTESVMPNGVTVASLFSAC 465
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/119 (20%), Positives = 57/119 (47%)
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+K N+ HG + +G + +++ LV +Y GY VF+ + E + +
Sbjct: 64 SKCTNIDSLRQAHGVLTGNGLMGDISIATKLVSLYGSFGYTKDARLVFDQIPEPDFYLWK 123
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ L+ +++ +F+ +++ G D+ FS L AC +++G++I ++ +
Sbjct: 124 VILRCYCLNNESFEVIKFYDLLMKHGFGYDDIVFSKALKACTEVQDLDNGKKIHCQIVK 182
>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
Length = 1161
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 169/530 (31%), Positives = 278/530 (52%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S K +H + ++ + + A L+ +Y + A+ +F+ T R + WNS+I +
Sbjct: 503 SDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGH 562
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A + A LF + + L+PD T+A + C L R +H I SGL D
Sbjct: 563 AQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDV 622
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+AL+ Y + + +A +VF + +++ +MI GFA G K+ +LF M
Sbjct: 623 NLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQND 682
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P + T ++ + L G+ + L S ++ V + L+S Y++ M A
Sbjct: 683 GFKPVKSTFSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDA 742
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + + D+++W+ +I GY+Q G G AL + ++ QG + S+L A +
Sbjct: 743 RKVFDKMPNRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSF 802
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ + G +H +++ + V V +AL+ MY+KCG L +VF+ +E+N++T+N++I
Sbjct: 803 SALEEGKRVHAEIVKRKMQGDVRVGAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMI 862
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
HG +A +FF + ++G+ PD STF+++L AC H GLV +G IF+ + ++G+
Sbjct: 863 NAYAQHGLASKALDFFNCMDKEGIKPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGL 922
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY +V LLG AG +EA + I +P P D AV LL C I+GN LAE A+
Sbjct: 923 SPTIEHYGCLVGLLGRAGRFQEAETLINQMPFPPDAAVWETLLGACRIHGNVALAEHAAN 982
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ + R A V+LSN YA GRWDDV K+R + G+RKE G SW+
Sbjct: 983 NALKLNARNPAVYVLLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWI 1032
Score = 221 bits (563), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 128/454 (28%), Positives = 232/454 (51%), Gaps = 1/454 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + ++L + +H+ +++ D L+ +YA LP AR LF+ P+R
Sbjct: 391 VLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRD 450
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+II YA +A L+K + +KP T+ + AC+ +S + +H
Sbjct: 451 LISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHE 510
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SG+ + ++AL+ Y + I EA VF+G D++ NSMI+G A G ++
Sbjct: 511 DILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWNSMIAGHAQHGSYEA 570
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +LF M + G PD+ T ++ G P L +G+ IH ++S + + L++
Sbjct: 571 AYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALIN 630
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY RC + AY VF+SL H ++++W+A+I G++ QG+ KA F ++ G K
Sbjct: 631 MYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKAFELFWQMQNDGFKPVKST 690
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+S+L A SA + G + +++ G+EL V +AL+ YSK G + +VF+ M
Sbjct: 691 FSSILKACMSSACLDEGKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMP 750
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+I+++N +I G +G A +F + E+G+ ++ +F ++L AC + +G+
Sbjct: 751 NRDIMSWNKMIAGYAQNGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKR 810
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ + + +Q ++ + G+LEEA
Sbjct: 811 VHAEIVKRK-MQGDVRVGAALISMYAKCGSLEEA 843
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 234/461 (50%), Gaps = 1/461 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S L K++H+ + +A RDP L+ +Y LPSAR +F +R
Sbjct: 189 ILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRD 248
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +N+++ YA + LF + + PD TY + A + S L + +H
Sbjct: 249 VVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHK 308
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ GL D +AL T + + + A + + +D D+V+ N++I+ A G +++
Sbjct: 309 LAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEE 368
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ + + M G + T + +++ L G+ IH + S + + L+S
Sbjct: 369 AFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLIS 428
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYARC + A +FN++ DL++W+A+I GY+++ D G+A+ ++++ +G K V
Sbjct: 429 MYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVT 488
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+L+A S+ G +IH +++ G + + +++AL++MY +CG + VFE
Sbjct: 489 FLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTR 548
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+II++NS+I G HG A++ F ++ ++GL PD+ TF+++L C + + GR+
Sbjct: 549 ARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQ 608
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
I + E G+Q ++ + G+L++AY SL
Sbjct: 609 IHMLIIES-GLQLDVNLGNALINMYIRCGSLQDAYEVFHSL 648
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 202/413 (48%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL+ K +HA + +A + D F + L+ +Y + A +F K P+R V WNS+I
Sbjct: 96 RSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLI 155
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA A LF+ + P TY I AC ++L + +H I +G
Sbjct: 156 SCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYGKKIHSKIIEAGYQ 215
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
RD ++L+ Y K + A +VF G+ D+V N+M+ +A + ++ + LF M
Sbjct: 216 RDPRVQNSLLNMYGKCEDLPSARQVFSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQM 275
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G PD+ T + L+ PS+L G+ IH + +S V + L +M+ RC +
Sbjct: 276 SSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDV 335
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A + D+V ++ALI +Q G Y +A + ++ G + SVL A
Sbjct: 336 AGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNAC 395
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ S + G +IH ++ + G V + ++L+ MY++CG L ++F TM +R++I++N
Sbjct: 396 STSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDLPRARELFNTMPKRDLISWN 455
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++I G +A + ++ + +G+ P TF LL AC + +DG+ I
Sbjct: 456 AIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMI 508
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 203/415 (48%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +H L L D T L ++ + A+ + R V ++N++I A
Sbjct: 300 LDEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAA 359
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
A + +A + + + + TY + ACS + L +H G D
Sbjct: 360 LAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSD 419
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L++ Y++ + A ++F+ + DL+ N++I+G+A ++++L+ M
Sbjct: 420 VQIGNSLISMYARCGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQS 479
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G P T + L+S S S G+ IH L+S S ++++ L++MY RC +
Sbjct: 480 EGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIME 539
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +VF D+++W+++I G++Q G Y A F ++ +G + D + ASVL
Sbjct: 540 AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKN 599
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH +I+ G +L V + +AL++MY +CG L +VF ++ RN++++ ++
Sbjct: 600 PEALELGRQIHMLIIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAM 659
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
I G G +AFE F + G P +STFS++L AC +++G+++ +
Sbjct: 660 IGGFADQGEDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHI 714
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 189/389 (48%), Gaps = 1/389 (0%)
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
HR ++ + L + + Y + + C+ L + +H + +G+G D S
Sbjct: 61 HRGSEREDLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLS 120
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L+ Y K + +A +VF + D++ NS+IS +A GF K+ QLF+ M G
Sbjct: 121 NLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFI 180
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P + T + +++ P+ L G+ IH +++ + V + L++MY +C + SA V
Sbjct: 181 PSKITYISILTACCSPAELEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQV 240
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ ++ D+V+++ ++ Y+Q+ + + F +++ +G D V ++L A + +
Sbjct: 241 FSGIYRRDVVSYNTMLGLYAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSML 300
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH + G + V +AL M+ +CG + Q E ++R+++ YN++I L
Sbjct: 301 DEGKRIHKLAVNEGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAAL 360
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +AFE + + G+ + +T+ ++L AC + G I + ++ E G +
Sbjct: 361 AQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHIS-EVGHSSD 419
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ ++ + G+L A ++PK
Sbjct: 420 VQIGNSLISMYARCGDLPRARELFNTMPK 448
>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
Length = 877
Score = 301 bits (770), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 291/542 (53%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ +++ +++HA+V + +D F A LV +Y + A ++F+K P
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I L + A L + + L P+ FT + I +ACS R +HG
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D LV Y+K +D+A KVFD + DL+LCN++ISG +H G D+
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF + + G + TL ++ S + +H +K F +V + L+
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPV 307
Y +C+C++ A VF D++ +++IT S Q D+G+ A+ F ++ +G + DP
Sbjct: 448 SYWKCSCLSDANRVFEECSSGDIIACTSMITALS-QCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+++S+L A A + G +H ++I+ F +ALV Y+KCG + F ++
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ER +++++++I GL HG +A E F ++++G+NP+ T +++LCAC H GLV++ +
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M E +GI EHY M+ LLG AG L++A + S+P + ++ GALL +
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + +L ++ A +LF +P K V+L+NTYA G W++V K+R + D+ ++KE +S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 548 WV 549
W+
Sbjct: 747 WI 748
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 224/451 (49%), Gaps = 6/451 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT-PQRSVFLWNSIIRAYALA 82
++HA+ D F A LV +Y + AR +F++ +R+ WN ++ AY
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ DA +F ++ + ++P F ++C+ AC+ + ++ R VH + G +D T+
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y K+ +D A +F+ + D D+V N++ISG G ++++L M G
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ +TL ++ +G+ IHGF +K++ DS DY+ LV MYA+ + ++ A V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ +FH DL+ +ALI+G S G + +AL F +L +G + +A+VL + A
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
+H ++ GF V + L+D Y KC L +VFE S +II S+I L
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITAL 480
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
A + F +++ KGL PD S+LL AC G+++ + + Q
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFM 537
Query: 443 TEHYI--YMVKLLGLAGNLEEAYSFIWSLPK 471
++ + +V G++E+A SLP+
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 192/391 (49%), Gaps = 19/391 (4%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITS--SALVTAYSKLSLIDEAIKVFDGVSD 167
+TR + + LPG +H + SG S+ S + L++ YSK A +VFD + D
Sbjct: 11 LTRYAAAQALLPGAH-LHASLLKSG----SLASFRNHLISFYSKCRRPCCARRVFDEIPD 65
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
P V +S+++ +++ G ++Q F M G +E+ L ++ + + L G +
Sbjct: 66 PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQV 122
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
H + + F S +V++ LV+MY M+ A VFN + V+W+ L++ Y +
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQ 182
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
G A+ F ++ G + + V+ A S N+ G +H V++ G++ V ++A
Sbjct: 183 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANA 242
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
LVDMY K G + + +FE M + +++++N++I G L+G ++A E + GL P+
Sbjct: 243 LVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPN 302
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYS 464
T S++L AC G + GR+I M + A ++ YI +V + L++A
Sbjct: 303 VFTLSSILKACSGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYAKNHFLDDARK 359
Query: 465 -FIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
F W + D + AL+S C G D A
Sbjct: 360 VFDWMFHR--DLILCNALISGCSHGGRHDEA 388
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 187/399 (46%), Gaps = 6/399 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+L LHA + K+ L + L+ Y+ AR +FD+ P W+S++
Sbjct: 18 QALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLV 75
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
AY+ A F + + + F + + C ++ L VH A+ +G G
Sbjct: 76 TAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARLGAQ--VHAMAMATGFG 132
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGV-SDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++ALV Y +D+A +VF+ S+ + V N ++S + ++Q+F
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G P E+ +++ + G+ +H ++ +D + ++ LV MY +
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGR 252
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ A +F + D+V+W+ALI+G G +A+ ++ G + ++S+L A
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKA 312
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ + G IHG++I+ + + LVDMY+K +L +VF+ M R++I
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILC 372
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
N++I G G +A F ++ ++GL + +T +A+L
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
>gi|147804706|emb|CAN64870.1| hypothetical protein VITISV_041329 [Vitis vinifera]
Length = 629
Score = 301 bits (770), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 267/495 (53%), Gaps = 9/495 (1%)
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
D T + +VF +N+II + + ++ + + PD FT+ C +AC D+
Sbjct: 97 DPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL---DVL 153
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
++ +HG GL D SALV Y K L++ A F+ + D+VL N+M++G+A
Sbjct: 154 EIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYA 213
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G ++ L+ F M P +T+ G +S L+ G+ IHGF +K +DS
Sbjct: 214 QIGQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVA 273
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
VS+ L+ MY +C C+ A +F + D+ +W+++++ + Q GD+ L ++ G
Sbjct: 274 VSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAG 333
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS------VMVSSALVDMYSKCG 355
+ D V + +VL A + A + G IHGY+I G V++ +A++DMY+KCG
Sbjct: 334 IQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCG 393
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ VFE MS +++ ++N +I+G G+HG+ +A E F + E L PDE TF +L
Sbjct: 394 SMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLS 453
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H G V+ GR +M +Y + EHY ++ +LG AG L+EAY ++P +P
Sbjct: 454 ACSHAGFVSQGRNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEANP 513
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
V ALL+ C ++ ++ LAE+ A ++FE +P V++SN Y GR+++V+++R +
Sbjct: 514 VVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVRHTM 573
Query: 536 VDNGLRKEAGVSWVS 550
+RK G SW+
Sbjct: 574 RQQNVRKTPGCSWIE 588
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 177/374 (47%), Gaps = 14/374 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H L+ K L D F + LV Y ++ A++ F++ P R V LWN+++ YA
Sbjct: 156 KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 215
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+F F+ + + P FT + DL R +HG A+ G S
Sbjct: 216 GQFEMVLETFRRMNDESVVPSRFTVTGXLSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 275
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y K I++A+++F+ + + D+ NS++S CG D +L+L D ML G
Sbjct: 276 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSVHEQCGDHDGTLRLLDRMLGAGIQ 335
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF--DSYDY----VSSVLVSMYARCNCM 256
PD T+ ++ + L G+ IHG+ + S D D + + ++ MYA+C M
Sbjct: 336 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 395
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A+ VF + + D+ +W+ +I GY G +AL F ++ K D V VL+A
Sbjct: 396 RDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 455
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVS----SALVDMYSKCGYLGLGIQVFETMS-ERN 371
+ + V G +++Q + V + + ++DM + G L ++ TM E N
Sbjct: 456 SHAGFVSQG---RNFLVQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEAN 512
Query: 372 IITYNSVILGLGLH 385
+ + +++ LH
Sbjct: 513 PVVWRALLAACRLH 526
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 125/270 (46%), Gaps = 10/270 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ + +H K + L+ +Y + A +F+ ++ +F WNSI+
Sbjct: 253 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIVSV 312
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + L +L ++PD T + ACS + L R +HG IVSGLG+D
Sbjct: 313 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 372
Query: 139 S------ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
+ +A++ Y+K + +A VF+ +S+ D+ N MI G+ G+ +++L++
Sbjct: 373 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMSNKDVASWNIMIMGYGMHGYGNEALEM 432
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMY 250
F M + PDE T VG++S +S G+ +KS +D + + ++ M
Sbjct: 433 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFL-VQMKSKYDVAPTIEHYTCVIDML 491
Query: 251 ARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
R ++ AY + ++ + V W AL+
Sbjct: 492 GRAGQLDEAYELALTMPIEANPVVWRALLA 521
>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
Length = 877
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 291/542 (53%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ +++ +++HA+V + +D F A LV +Y + A ++F+K P
Sbjct: 208 VVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGRVDIASVIFEKMPDSD 267
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I L + A L + + L P+ FT + I +ACS R +HG
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHG 327
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D LV Y+K +D+A KVFD + DL+LCN++ISG +H G D+
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDE 387
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF + + G + TL ++ S + +H +K F +V + L+
Sbjct: 388 ALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLID 447
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPV 307
Y +C+C++ A VF D++ +++IT S Q D+G+ A+ F ++ +G + DP
Sbjct: 448 SYWKCSCLSDANRVFEECSSGDIIACTSMITALS-QCDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+++S+L A A + G +H ++I+ F +ALV Y+KCG + F ++
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ER +++++++I GL HG +A E F ++++G+NP+ T +++LCAC H GLV++ +
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M E +GI EHY M+ LLG AG L++A + S+P + ++ GALL +
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASIWGALLGASRV 686
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + +L ++ A +LF +P K V+L+NTYA G W++V K+R + D+ ++KE +S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 548 WV 549
W+
Sbjct: 747 WI 748
Score = 204 bits (518), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 224/451 (49%), Gaps = 6/451 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT-PQRSVFLWNSIIRAYALA 82
++HA+ D F A LV +Y + AR +F++ +R+ WN ++ AY
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKN 180
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ DA +F ++ + ++P F ++C+ AC+ + ++ R VH + G +D T+
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTA 240
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y K+ +D A +F+ + D D+V N++ISG G ++++L M G
Sbjct: 241 NALVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLV 300
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ +TL ++ +G+ IHGF +K++ DS DY+ LV MYA+ + ++ A V
Sbjct: 301 PNVFTLSSILKACSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKV 360
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ +FH DL+ +ALI+G S G + +AL F +L +G + +A+VL + A
Sbjct: 361 FDWMFHRDLILCNALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
+H ++ GF V + L+D Y KC L +VFE S +II S+I L
Sbjct: 421 STTRQVHALAVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITAL 480
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
A + F +++ KGL PD S+LL AC G+++ + + Q
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFM 537
Query: 443 TEHYI--YMVKLLGLAGNLEEAYSFIWSLPK 471
++ + +V G++E+A SLP+
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 191/391 (48%), Gaps = 19/391 (4%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITS--SALVTAYSKLSLIDEAIKVFDGVSD 167
+TR + + LPG +H + SG S+ S + L++ YSK A + FD + D
Sbjct: 11 LTRYAAAQALLPGAH-LHASLLKSG----SLASFRNHLISFYSKCRRPCCARRFFDEIPD 65
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
P V +S+++ +++ G ++Q F M G +E+ L ++ + + L G +
Sbjct: 66 PCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL---GAQV 122
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
H + + F S +V++ LV+MY M+ A VFN + V+W+ L++ Y +
Sbjct: 123 HAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQ 182
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
G A+ F ++ G + + V+ A S N+ G +H V++ G++ V ++A
Sbjct: 183 CGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANA 242
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
LVDMY K G + + +FE M + +++++N++I G L+G ++A E + GL P+
Sbjct: 243 LVDMYMKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPN 302
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYS 464
T S++L AC G + GR+I M + A ++ YI +V + L++A
Sbjct: 303 VFTLSSILKACSGAGAFDLGRQIHGFMIKA---NADSDDYIGVGLVDMYAKNHFLDDARK 359
Query: 465 -FIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
F W + D + AL+S C G D A
Sbjct: 360 VFDWMFHR--DLILCNALISGCSHGGRHDEA 388
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 186/399 (46%), Gaps = 6/399 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+L LHA + K+ L + L+ Y+ AR FD+ P W+S++
Sbjct: 18 QALLPGAHLHASLLKSGSLAS--FRNHLISFYSKCRRPCCARRFFDEIPDPCHVSWSSLV 75
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
AY+ A F + + + F + + C ++ L VH A+ +G G
Sbjct: 76 TAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDARLGAQ--VHAMAMATGFG 132
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGV-SDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++ALV Y +D+A +VF+ S+ + V N ++S + ++Q+F
Sbjct: 133 SDVFVANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGE 192
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G P E+ +++ + G+ +H ++ +D + ++ LV MY +
Sbjct: 193 MVWSGIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKMGR 252
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ A +F + D+V+W+ALI+G G +A+ ++ G + ++S+L A
Sbjct: 253 VDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKA 312
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ + G IHG++I+ + + LVDMY+K +L +VF+ M R++I
Sbjct: 313 CSGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILC 372
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
N++I G G +A F ++ ++GL + +T +A+L
Sbjct: 373 NALISGCSHGGRHDEALSLFYELRKEGLGVNRTTLAAVL 411
>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 785
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 181/543 (33%), Positives = 288/543 (53%), Gaps = 3/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + + K +H V K L+ Y + SARILFD+ R
Sbjct: 164 VLKGFAASAKVRECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRD 223
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS+I + + F +L + D+ T + AC+ +L R +H
Sbjct: 224 VVSWNSMISGCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHA 283
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G + ++ L+ YSK ++ A +VF + + +V S+I+ G +
Sbjct: 284 YGVKAGFSGGVMFNNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYE 343
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ LFD M G PD Y + ++ + L G+ +H K++ S VS+ L++
Sbjct: 344 AIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMN 403
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MYA+C M A +F+ L ++V+W+ +I GYSQ +AL F L+MQ + K D V
Sbjct: 404 MYAKCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLF--LDMQKQLKPDDV 461
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A VL A A A + G IHG++++ G+ + V+ ALVDMY KCG L L Q+F+ +
Sbjct: 462 TMACVLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMI 521
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
++++I + +I G G+HGF +A F + G+ P+ES+F+++L AC H GL+ +G
Sbjct: 522 PKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGW 581
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
++F M E I+ K EHY MV LL +GNL AY FI ++P D A+ GALLS C I
Sbjct: 582 KLFDSMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRI 641
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + +LAE VA +FE +P Y V+L+N YAE +W++V K++ I GL+ + G S
Sbjct: 642 HHDVELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCS 701
Query: 548 WVS 550
W+
Sbjct: 702 WIE 704
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/427 (28%), Positives = 226/427 (52%), Gaps = 1/427 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
N + VL+L +SL K +H++++ + D KLV +Y L R +FD
Sbjct: 57 LNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIFD 116
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+FLWN ++ YA + ++ LF+ + ++ D++T+ C+ + + ++ +
Sbjct: 117 GILNDKIFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRE 176
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ VHG + G G + ++L+ AY K ++ A +FD +SD D+V NSMISG
Sbjct: 177 CKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEVESARILFDELSDRDVVSWNSMISGCTM 236
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
GF L+ F ML LG D TLV ++ L++G+ +H + +K+ F
Sbjct: 237 NGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSGGVMF 296
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
++ L+ MY++C +N A VF + +V+W+++I + ++G + +A+ F ++ +G
Sbjct: 297 NNTLLDMYSKCGNLNGANEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGL 356
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D + SV+ A A S ++ G +H ++ ++ ++ VS+AL++MY+KCG +
Sbjct: 357 RPDIYAVTSVVHACACSNSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANL 416
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F + +NI+++N++I G + +A + F D ++K L PD+ T + +L AC
Sbjct: 417 IFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLD-MQKQLKPDDVTMACVLPACAGLAA 475
Query: 423 VNDGREI 429
+ GREI
Sbjct: 476 LEKGREI 482
>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
Length = 948
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 278/525 (52%), Gaps = 2/525 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L+ K + +D L+ +Y N L R +FDK R WN++I Y+
Sbjct: 297 IHGLIEKIGIKKDVIVNNGLLSMYCKFNGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGL 356
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ ++ LF ++ Q KPD T I +AC DL ++VH I SG D+ S+
Sbjct: 357 YEESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNI 415
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K + + +VF G+ D V NSMI+ + G +D++++LF M++ PD
Sbjct: 416 LINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPD 474
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T V L+S + L +G+ +H K F+S VS+ LV MYA+C M + VF
Sbjct: 475 SVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFE 534
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
++ D++TW+ +I D L ++ +G D + S+L + A
Sbjct: 535 NMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQ 594
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IHG + + G E V V + L++MYSKCG L QVF+ M ++++T+ ++I G+
Sbjct: 595 GKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGM 654
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+G +A F ++ G+ PD F A++ AC H GLV +G F RM ++Y I+ + E
Sbjct: 655 YGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIE 714
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY +V LL + L++A FI S+P D ++ GALLS C + G++++A+ V+ ++ E
Sbjct: 715 HYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERIIEL 774
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P Y V++SN YA G+WD V +R I GL+K+ G SW+
Sbjct: 775 NPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWM 819
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/416 (28%), Positives = 214/416 (51%), Gaps = 3/416 (0%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWN 73
S + ++ +LH+L+ L ++ KL+ YA + S + +P +V+ WN
Sbjct: 84 SAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWN 143
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
SIIRA F++A SL+ R +L+PD +T+ + AC+ D + +H +
Sbjct: 144 SIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXM 203
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G G D +AL+ Y + + +D+A KVF+ + D+V NS+ISG+ G+W+++L+++
Sbjct: 204 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 263
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
LG PD YT+ ++ + G IHG K V++ L+SMY +
Sbjct: 264 YRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMYCKF 323
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
N + +F+ + D V+W+ +I GYSQ G Y +++ F ++ Q K D + I S+L
Sbjct: 324 NGLIDGRRIFDKMVLRDAVSWNTMICGYSQVGLYEESIKLFMEMVNQF-KPDLLTITSIL 382
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A ++ G +H Y+I G+E S+ L++MY+KCG L +VF M ++ +
Sbjct: 383 QACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSV 442
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++NS+I +G +A + F+ +++ + PD T+ LL G + G+E+
Sbjct: 443 SWNSMINVYIQNGSFDEAMKLFK-MMKTDVKPDSVTYVMLLSMSTQLGDLXLGKEL 497
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 134/325 (41%), Gaps = 20/325 (6%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+ ++L +S L KELH +AK + + LV +YA + + +F+
Sbjct: 478 YVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLKVFENMK 537
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
R + WN+II + + N + + + PD T I CS + +
Sbjct: 538 ARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKE 597
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG GL D + L+ YSK + + +VF + D+V ++IS G
Sbjct: 598 IHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGE 657
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
K+++ F M G PD V +I SGL E L + + ++ + Y
Sbjct: 658 GKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHY- 716
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ +V + +R ++ A S+ PD W AL++ GD A ++++
Sbjct: 717 ---ACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIA----QRVSE 769
Query: 300 QGKKADP------VLIASVLAAAAK 318
+ + +P VL+++V AA K
Sbjct: 770 RIIELNPDDTGYYVLVSNVYAALGK 794
>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 818
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 181/556 (32%), Positives = 288/556 (51%), Gaps = 11/556 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L + +E+H L+ + F T ++ LYA + +A +F++ +
Sbjct: 151 LLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKD 210
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W +++ YA A L + KPD+ T I A ++ L R +HG
Sbjct: 211 LVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHG 270
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A SG ++AL+ Y K A VF G+ +V N+MI G A G ++
Sbjct: 271 YAFRSGFESLVNVTNALLDMYFKCGSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEE 330
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ F ML G+ P T++G++ L G +H K DS V + L+S
Sbjct: 331 AFATFLKMLDEGEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLIS 390
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C ++ A +FN+L + VTW+A+I GY+Q G +AL F + QG K D
Sbjct: 391 MYSKCKRVDIAASIFNNLEKTN-VTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFT 449
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ V+ A A + IHG ++ + +V VS+ALVDMY+KCG + ++F+ M
Sbjct: 450 LVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMMQ 509
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
ER++IT+N++I G G HG + + F ++ + + P++ TF +++ AC H G V +G
Sbjct: 510 ERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLL 569
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
+F M E+Y ++ +HY MV LLG AG L++A++FI +P +V GA+L C I+
Sbjct: 570 LFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKIH 629
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N +L E A +LF+ DP +G Y V+L+N YA + WD V K+R + D GL K G SW
Sbjct: 630 KNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCSW 689
Query: 549 V----------SGSSN 554
V SGS+N
Sbjct: 690 VELRNEIHTFYSGSTN 705
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 203/403 (50%), Gaps = 4/403 (0%)
Query: 17 QSLSRTKELHAL---VAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
++ + KEL+ + + K + + TK++ L+ A +F+ + L++
Sbjct: 55 ENCTSKKELYQILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYH 114
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
+++ YA DA F ++ +++ YAC+ + C EN DL R +HG I +
Sbjct: 115 IMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITN 174
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G + +A+++ Y+K ID A K+F+ + DLV ++++G+A G ++LQL
Sbjct: 175 GFESNLFVMTAVMSLYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLV 234
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M G+ PD TLV ++ + + L +G+ IHG+ +S F+S V++ L+ MY +C
Sbjct: 235 LQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVNVTNALLDMYFKC 294
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
A VF + +V+W+ +I G +Q G+ +A F K+ +G+ V + VL
Sbjct: 295 GSARIARLVFKGMRSKTVVSWNTMIDGCAQNGESEEAFATFLKMLDEGEVPTRVTMMGVL 354
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A A ++ G +H + + + +V V ++L+ MYSKC + + +F + + N +
Sbjct: 355 LACANLGDLERGWFVHKLLDKLKLDSNVSVMNSLISMYSKCKRVDIAASIFNNLEKTN-V 413
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
T+N++ILG +G +A F + +G+ D T ++ A
Sbjct: 414 TWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITA 456
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 98/200 (49%)
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
F +K+ F + + ++S++ + + A VF + V + ++ GY++ G
Sbjct: 69 FIIKNGFYNEHLFQTKVISLFCKFGSNSEAARVFEHVELKLDVLYHIMLKGYAKNSSLGD 128
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL +F ++ + A +L ++ ++ G IHG +I +GFE ++ V +A++
Sbjct: 129 ALCFFLRMMCDEVRLVVGDYACLLQLCGENLDLKKGREIHGLIITNGFESNLFVMTAVMS 188
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
+Y+KC + ++FE M ++++++ +++ G +G +A + + E G PD T
Sbjct: 189 LYAKCRQIDNAYKMFERMQHKDLVSWTTLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVT 248
Query: 410 FSALLCACCHGGLVNDGREI 429
++L A + GR I
Sbjct: 249 LVSILPAVADMKALRIGRSI 268
>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Vitis vinifera]
Length = 686
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/495 (32%), Positives = 275/495 (55%), Gaps = 2/495 (0%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACS 115
R LF + Q ++FLWN++IR F+DA F L+R++ P+NFT+ + +AC+
Sbjct: 65 TRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIE-FYGLMRSEGFLPNNFTFPFVLKACA 123
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
DL +H + G D ++LV Y+K +++A KVFD + D ++V +
Sbjct: 124 RLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKCGYLEDAHKVFDDIPDKNVVSWTA 183
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
+ISG+ G + +++ +F +L + PD +T+V ++S + L+ G+ IH ++
Sbjct: 184 IISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMG 243
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
+V + LV MYA+C M A VF+ + D+V+W A+I GY+ G +A+ F
Sbjct: 244 MVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWGAMIQGYALNGLPKEAIDLFL 303
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ + K D + VL+A A+ + G + G V ++ F + ++ +AL+D+Y+KCG
Sbjct: 304 QMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPVLGTALIDLYAKCG 363
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ +VF+ M E++ + +N++I GL ++G+ +F F + + G+ PD +TF LLC
Sbjct: 364 SMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLC 423
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
C H GLV++GR F M + + EHY MV LLG AG L+EA+ I ++P +
Sbjct: 424 GCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANA 483
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
V GALL C I+ ++ LAE+ QL E +P V+LSN Y+ + +WD+ K+R +
Sbjct: 484 IVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLLSNIYSANLKWDEAAKVRLSM 543
Query: 536 VDNGLRKEAGVSWVS 550
+ ++K G SW+
Sbjct: 544 NEKRIQKPPGCSWIE 558
>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 276/529 (52%), Gaps = 1/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H + K L+ D + LV +YA N A LF++ P++ V WN++I Y +
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F +A F + R +P++ T +C+ DL +H I SG DS S
Sbjct: 186 GNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K ++ AI+VF+ + +V NSMISG+ G +QLF M G
Sbjct: 246 SALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVK 305
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TL LI + L G+ +HG+ +++ S +++S L+ +Y +C + A ++
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENI 365
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + +V+W+ +I+GY +G +AL F ++ + D + SVL A ++ A +
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAAL 425
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ + + +V AL+DMY+KCG + VF+ + +R+++++ S+I
Sbjct: 426 EKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG Y A E F ++++ + PD TF A+L AC H GLV++G F +M YGI +
Sbjct: 486 GSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIPR 545
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA-VSGALLSCCHIYGNSDLAEIVAHQL 501
EHY ++ LLG AG L EAY + P+ D + L S C ++ N DL +A L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ DP + ++LSN YA +WD+V +R + + GL+K G SW+
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIE 654
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 128/460 (27%), Positives = 233/460 (50%), Gaps = 9/460 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR-SVFLWNSI 75
+SL + K +H V L D F L+ LY ++ A+ +FD + LWN +
Sbjct: 17 KSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPCEISLWNGL 76
Query: 76 IRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+ Y + + +A LF+ LL LKPD++TY + +AC + +H + +G
Sbjct: 77 MAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTG 136
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L D + S+LV Y+K + ++AI +F+ + + D+ N++IS + G + ++L+ F
Sbjct: 137 LMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKEALEYFG 196
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M R G P+ T+ IS L+ G IH + S F ++SS LV MY +C
Sbjct: 197 LMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCG 256
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ A VF + +V W+++I+GY +GD + F+++ +G K ++S++
Sbjct: 257 HLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIM 316
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
++SA + G +HGY I++ + V ++S+L+D+Y KCG + L +F+ + + +++
Sbjct: 317 VCSRSARLLEGKFVHGYTIRNRIQSDVFINSSLMDLYFKCGKVELAENIFKLIPKSKVVS 376
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N +I G G ++A F ++ + + PD TF+++L AC + G EI +
Sbjct: 377 WNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLII 436
Query: 435 EEYGIQAKTEHYIYMVKLLGL---AGNLEEAYSFIWSLPK 471
E + + + M LL + G ++EA+S LPK
Sbjct: 437 E----KKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPK 472
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 170/323 (52%), Gaps = 8/323 (2%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP- 168
+ RAC + L + +H + GL D L+ Y L D A VFD + +P
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCVFDNMENPC 68
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLIS---GLWEPSLLSVG 224
++ L N +++G+ + ++L+LF+ +L PD YT ++ GL++ L G
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLYKYVL---G 125
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ IH +K+ V S LV MYA+CN A +FN + D+ W+ +I+ Y Q
Sbjct: 126 KMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
G++ +AL YF + G + + V I + +++ A+ ++ G IH +I GF L +S
Sbjct: 186 GNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
SALVDMY KCG+L + I+VFE M ++ ++ +NS+I G GL G + + F+ + +G+
Sbjct: 246 SALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVK 305
Query: 405 PDESTFSALLCACCHGGLVNDGR 427
P +T S+L+ C + +G+
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGK 328
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 187/399 (46%), Gaps = 5/399 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+R E+H + + L D F ++ LV +Y L A +F++ P+++V WNS+I
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEVFEQMPKKTVVAWNSMISG 282
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y L LFK + +KP T + + CS ++ L +FVHG I + + D
Sbjct: 283 YGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQSD 342
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+S+L+ Y K ++ A +F + +V N MISG+ G ++L LF M +
Sbjct: 343 VFINSSLMDLYFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK 402
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
PD T +++ + + L G+ IH ++ D+ + V L+ MYA+C ++
Sbjct: 403 SYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDE 462
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ VF L DLV+W+++IT Y G AL F ++ K D V ++L+A
Sbjct: 463 AFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGH 522
Query: 319 SANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITY 375
+ V G ++ +G V S L+D+ + G L ++ + E ++
Sbjct: 523 AGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELL 582
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+++ LH E R +I+K +PD+S+ LL
Sbjct: 583 STLFSACRLHRNIDLGAEIARTLIDK--DPDDSSTYILL 619
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 50/106 (47%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L + +E+H L+ + L + L+ +YA + A +F P+R
Sbjct: 415 VLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRD 474
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
+ W S+I AY + A LF +L++ +KPD T+ I AC
Sbjct: 475 LVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSAC 520
>gi|225463844|ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 617
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 183/537 (34%), Positives = 293/537 (54%), Gaps = 23/537 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L+ + L AL A+ SL DP YA L+ A++ +TP ++ L+N+IIR
Sbjct: 55 QLTISTRLSALCAQ-SLPIDPRYALSLL-----------AQL---RTP--NLPLYNAIIR 97
Query: 78 AYALAHRFNDAKS---LFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
A ++ ND+ ++K +L + PDN+T + +AC+E+ + VHG AI G
Sbjct: 98 GLATSN--NDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMG 155
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L D S+ L+ Y+ +I A KVFD DLV +MI G+ GF + + LF
Sbjct: 156 LASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGFAREGVGLFF 215
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARC 253
M D TLV ++S L +G+ +H + +++S + D +V + LV MY +C
Sbjct: 216 EMCGENLQADGMTLVIVLSSCARLGDLRLGRKLHRYIIRNSNVNLDVFVGNALVDMYLKC 275
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
N A VF + ++V+W+++I+G +Q+G + ++LY FRK+ G K D V + +VL
Sbjct: 276 GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVL 335
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ A + G +H Y+ ++ + +ALVDMY+KCG + VF+ M+ +++
Sbjct: 336 NSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVY 395
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+Y ++I+GL +HG +A + F ++ + G+ PDE TF +L AC H GLV +GR+ F M
Sbjct: 396 SYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDM 455
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+ Y ++ + EHY MV LLG AG + EA FI ++P D V GALL C I+G +L
Sbjct: 456 STIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVEL 515
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E V ++ + +PRK V++SN Y+ RW D +KLR + + L K G S +
Sbjct: 516 GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIE 572
>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
Length = 746
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 287/533 (53%), Gaps = 5/533 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ + +LH V ++ +D + T L+ Y+ N + AR++FD+ +++ W +II
Sbjct: 167 VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAG 226
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y R + LF + T + PD + + + ACS L G + +H + G D
Sbjct: 227 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 286
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ L+ Y+K + + K+FD + +++ +MISG+ F ++++LF M R
Sbjct: 287 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 346
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
LG PD + +++ L G+ +H + +K++ +S ++V + L+ MYA+ N +
Sbjct: 347 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 406
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + ++++++A+I GYS Q +AL F ++ ++ +K + A+++ AA+
Sbjct: 407 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASN 466
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A++ G H +++ G + V++ALVDMY+KCG + ++F + R+++ +NS+
Sbjct: 467 LASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSM 526
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A FR+++++G+ P+ TF A+L AC H G V DG F M +G
Sbjct: 527 ISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFG 585
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA--VSGALLSCCHIYGNSDLAEI 496
I+ TEHY +V LLG +G L EA FI + P++PA V +LLS C I GN +L +
Sbjct: 586 IKPGTEHYACVVSLLGRSGKLFEAKEFIEKM--PIEPAAIVWRSLLSACRIAGNVELGKY 643
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A DP+ ++LSN +A G W DV K+RD + + + KE G SW+
Sbjct: 644 AAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 696
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/464 (27%), Positives = 233/464 (50%), Gaps = 6/464 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+LS S + K +H + + L D F A L+ + + ++ + +AR++FDK P ++
Sbjct: 55 LLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKN 114
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVH 127
+ W+S++ Y+ +A +F +L R + P+ F A + RAC++ + +H
Sbjct: 115 LITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLH 174
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + SG +D ++L+ YSK I+EA VFD +S+ V ++I+G+ CG
Sbjct: 175 GFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 234
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
SL+LF M PD Y + ++S L G+ IH + L+ + V +VL+
Sbjct: 235 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLI 294
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
Y +CN + + +F+ + ++++W+ +I+GY Q +A+ F ++N G K D
Sbjct: 295 DFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGF 354
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SVL + + G +H Y I+ E V + L+DMY+K L +VF+ M
Sbjct: 355 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 414
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+E+N+I+YN++I G +A E F ++ + P+E TF+AL+ A + + G+
Sbjct: 415 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQ 474
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY----SFIW 467
+ ++ + G+ +V + G++EEA S IW
Sbjct: 475 QFHNQLV-KMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIW 517
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 181/346 (52%), Gaps = 6/346 (1%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L+P +A + + + + + +HG IVSGL D+ ++ L+ SK +D A
Sbjct: 45 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 104
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF-DWMLRLGKTPDEYTLVGLISGLWEP 218
VFD + +L+ +SM+S ++ G+ +++L +F D + G+ P+E+ L +I +
Sbjct: 105 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 164
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
++ G +HGF ++S FD YV + L+ Y++ + A VF+ L VTW+ +I
Sbjct: 165 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 224
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GY++ G +L F ++ D +++SVL+A + + G IH YV++ G E
Sbjct: 225 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 284
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ V V + L+D Y+KC + G ++F+ M +NII++ ++I G + F ++A + F ++
Sbjct: 285 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 344
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G PD +++L +C + GR++ Y I+A E
Sbjct: 345 NRLGWKPDGFACTSVLTSCGSREALEQGRQVHA-----YTIKANLE 385
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 139/293 (47%), Gaps = 14/293 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++L + +++HA KA+L D F L+ +YA +N+L A+ +FD +++
Sbjct: 359 VLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVMAEQN 418
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +N++I Y+ + ++A LF + KP+ FT+A + A S + L + H
Sbjct: 419 VISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHN 478
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GL ++ALV Y+K I+EA K+F+ D+V NSMIS A G ++
Sbjct: 479 QLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEE 538
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG----QGIHGFCLKSSFDSYDYVSS 244
+L +F M++ G P+ T V ++S + G + GF +K + Y +
Sbjct: 539 ALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHY----A 594
Query: 245 VLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSAL-----ITGYSQQGDYGKAL 291
+VS+ R + A + P + W +L I G + G Y +
Sbjct: 595 CVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNVELGKYAAEM 647
>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Cucumis sativus]
Length = 1573
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 180/547 (32%), Positives = 287/547 (52%), Gaps = 7/547 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L + L +++HALV K+S + L+ +Y+ V+ +A F +P+
Sbjct: 899 IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-- 125
+ WN++I +YA + +A F++LLR LKPD FT A + RACS + G F
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDE--GEYFTL 1016
Query: 126 ---VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VH AI G+ DS S+AL+ YSK +DEA + G D DL N+++ G+
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
K+L+ F M +G DE TL I L G+ I + +K F++ +V
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
SS ++ MY +C M +A +F + PD V W+ +I+GY + GD AL + + + G
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D A+++ A++ + G IH V++ + L V ++LVDMY KCG + +
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYR 1256
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF M R ++ +N+++LGL HG +A FR + G+ PD+ TF +L AC H GL
Sbjct: 1257 VFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGL 1316
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
++ + F M + YGI + EHY +V LG AG ++EA + I S+P ++ ALL
Sbjct: 1317 FSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALL 1376
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C G+++ A+ VA +L DP + V+LSN YA +WDDV R+ + ++K
Sbjct: 1377 GACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKK 1436
Query: 543 EAGVSWV 549
+ G SW+
Sbjct: 1437 DPGFSWI 1443
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 32/413 (7%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++ +H K D F + LV +Y ++ AR+LFDK P+R LWN +++AY
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
++A F R+ PD C+ NSD+ R H
Sbjct: 796 NSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGV--NSDVSNNRKRH-------------- 839
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ V AY A+K+F ++ N ++ F H G ++ F +LR
Sbjct: 840 -AEQVKAY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D TLV ++S L +G+ IH +KSSF VS+ L++MY++ + +A
Sbjct: 891 GHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK 950
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA---K 318
F + DL++W+ +I+ Y+Q +A+ FR L G K D +ASVL A + +
Sbjct: 951 TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDE 1010
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
G+ +H Y I+ G VS+AL+D+YSK G + + + ++ ++N++
Sbjct: 1011 GEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAI 1070
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN--DGREI 429
+ G + +A E F + E G+ DE T + + A G L+N G++I
Sbjct: 1071 MFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS--GCLINLKQGKQI 1121
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 189/419 (45%), Gaps = 44/419 (10%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K HA + + L D + L+ +Y+ L SAR +FDK+ R + WNSI+ AYA
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA-- 688
Query: 83 HRFNDAKSLFKNLLRT-----QLKPDNFTYACITRACSENSDLPG-----LRFVHGGAIV 132
+F D S ++N+L L+ F+ +T A L VHG A+
Sbjct: 689 -QFAD--SSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G D S ALV Y K L+ +A +FD + + D VL N M+ + F D++L+
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F R G PD L +I G+ S +S + H + V + + M+
Sbjct: 806 FSAFHRSGFFPDFSNLHCVIGGV--NSDVSNNRKRHA----------EQVKAYAMKMFP- 852
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ ++F W+ +T + G A+ F+ L D V + +
Sbjct: 853 ---FDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+AA + ++ G IH VI+ F V VS++L++MYSK G + + F E ++
Sbjct: 901 LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
I++N++I + +A FRD++ GL PD+ T +++L AC G D E FT
Sbjct: 961 ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG----DEGEYFT 1015
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 10/221 (4%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +G+ H + S Y+++ L++MY++C + SA VF+ DLVTW++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 281 YSQQGD--YGKALYYFRKLNMQ---GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
Y+Q D Y L FR + G + +A +L S V +HGY ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
GFEL + VS ALV++Y K G +G +F+ M ER+ + +N ++ + F +A FF
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
G PD FS L C GG+ +D R E+
Sbjct: 807 SAFHRSGFFPD---FSNLHCVI--GGVNSDVSNNRKRHAEQ 842
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 9/197 (4%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
R+ +DL + H + SG D ++ L+T YSK + A +VFD SD DLV
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 172 LCNSMISGFAHCGFWDKS-------LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
NS+++ +A F D S +LF + G + TL L+ + V
Sbjct: 679 TWNSILAAYAQ--FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +HG+ +K F+ +VS LV++Y + + A +F+ + D V W+ ++ Y +
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 285 GDYGKALYYFRKLNMQG 301
+AL +F + G
Sbjct: 797 SFQDEALRFFSAFHRSG 813
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+A A++ G H ++ G +++ L+ MYSKCG L QVF+ S+R+++T
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 375 YNSVI 379
+NS++
Sbjct: 680 WNSIL 684
>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Vitis vinifera]
Length = 709
Score = 300 bits (768), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 184/577 (31%), Positives = 304/577 (52%), Gaps = 33/577 (5%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
NL +L+ S +S S+ K+LHA + + SL P + ++ +Y+ N+L + ++F+
Sbjct: 6 NLCKTLLQNPSSVKSKSQAKQLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDSLLIFNS 64
Query: 64 TPQRSVFL-WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
P L W SIIR Y F + S F +L + PD+ + + ++C+ DL
Sbjct: 65 LPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRF 124
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA------------------------ 158
VHG I G+G D T +AL+ YSK ++E
Sbjct: 125 GESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESY 184
Query: 159 -----IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
KVF+ + D+V N++ISG A G + +L + M PD +TL ++
Sbjct: 185 YLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLP 244
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
E L G+ IHG+ +++ +D+ ++ S L+ MYA+C ++ + VF L D ++
Sbjct: 245 IFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGIS 304
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+++I G Q G + + L +F+++ + K + V +S++ A A + G +HGY+I
Sbjct: 305 WNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYII 364
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ F+ +V ++SALVDMY+KCG + +F+ M +++++ ++I+G LHG Y A
Sbjct: 365 RSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAIS 424
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F+ + +G+ P+ F A+L AC H GLV++ + F MT++Y I EHY + LL
Sbjct: 425 LFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLL 484
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK-GAYK 512
G G LEEAY FI + +V LL+ C ++ N +LAE V+ +LF DP+ GAY
Sbjct: 485 GRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIGAY- 543
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN Y+ GRW D KLR + D G++K+ SW+
Sbjct: 544 VLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWI 580
>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Glycine max]
Length = 778
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/525 (32%), Positives = 281/525 (53%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA + F A+ LV LY + + AR +FDK P R LWN++I
Sbjct: 125 LHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCC 184
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
++D+ +FK+++ ++ D+ T A + A +E ++ + A+ G D +
Sbjct: 185 YDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTG 244
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ +SK +D A +F + PDLV N++ISGF+ G + +++ F +L G+
Sbjct: 245 LISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVS 304
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+VGLI L + I GFC+KS VS+ L ++Y+R N ++ A +F+
Sbjct: 305 SSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFD 364
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ W+A+I+GY+Q G A+ F+++ +PV I S+L+A A+ +
Sbjct: 365 ESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSF 424
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H + E ++ VS+AL+DMY+KCG + Q+F+ SE+N +T+N++I G GL
Sbjct: 425 GKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIFGYGL 484
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG+ +A + F +++ G P TF ++L AC H GLV +G EIF M +Y I+ E
Sbjct: 485 HGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAE 544
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV +LG AG LE+A FI +P PAV G LL C I+ +++LA + + +LFE
Sbjct: 545 HYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFEL 604
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP Y V+LSN Y+ + + +R+ + L K G + +
Sbjct: 605 DPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLI 649
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 228/442 (51%), Gaps = 10/442 (2%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E HA + + D TKL + AR LF P+ +FL+N +I+ ++ +
Sbjct: 26 ETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSVPKPDIFLFNVLIKGFSFS- 84
Query: 84 RFNDAKSL--FKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
DA S+ + +LL+ T L PDNFTYA A + D G+ +H A+V G +
Sbjct: 85 --PDASSISFYTHLLKNTTLSPDNFTYAFAISASPD--DNLGM-CLHAHAVVDGFDSNLF 139
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+SALV Y K S + A KVFD + D D VL N+MI+G +D S+Q+F M+ G
Sbjct: 140 VASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLVRNCCYDDSVQVFKDMVAQG 199
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D T+ ++ + E + VG GI LK F DYV + L+S++++C +++A
Sbjct: 200 VRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCEDVDTAR 259
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F + PDLV+++ALI+G+S G+ A+ YFR+L + G++ + ++ ++
Sbjct: 260 LLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIPVSSPFG 319
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ I G+ ++ G L VS+AL +YS+ + L Q+F+ SE+ + +N++I
Sbjct: 320 HLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEIDLARQLFDESSEKTVAAWNAMIS 379
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G T A F++++ P+ T +++L AC G ++ G+ + ++ + ++
Sbjct: 380 GYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVH-QLIKSKNLE 438
Query: 441 AKTEHYIYMVKLLGLAGNLEEA 462
++ + GN+ EA
Sbjct: 439 QNIYVSTALIDMYAKCGNISEA 460
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 151/330 (45%), Gaps = 19/330 (5%)
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
N A I++AC+ P L H I +G D T + L + A +F
Sbjct: 9 NTLLALISKACT----FPHLAETHAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFF 64
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGKTPDEYTLVGLISGLWEPSLLS 222
V PD+ L N +I GF+ S+ + +L+ +PD +T IS + +L
Sbjct: 65 SVPKPDIFLFNVLIKGFSFSP-DASSISFYTHLLKNTTLSPDNFTYAFAISASPDDNL-- 121
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G +H + FDS +V+S LV +Y + + + A VF+ + D V W+ +ITG
Sbjct: 122 -GMCLHAHAVVDGFDSNLFVASALVDLYCKFSRVAYARKVFDKMPDRDTVLWNTMITGLV 180
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ Y ++ F+ + QG + D +A+VL A A+ V G I ++ GF
Sbjct: 181 RNCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDY 240
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK- 401
V + L+ ++SKC + +F + + ++++YN++I G +G T A ++FR+++
Sbjct: 241 VLTGLISVFSKCEDVDTARLLFGMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSG 300
Query: 402 ---------GLNPDESTFSALLCACCHGGL 422
GL P S F L ACC G
Sbjct: 301 QRVSSSTMVGLIPVSSPFGHLHLACCIQGF 330
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H L+ +L ++ + +T L+ +YA + A LFD T +++ WN++I
Sbjct: 421 ALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNTMIF 480
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y L ++A LF +L +P + T+ + ACS
Sbjct: 481 GYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACS 518
>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g33170-like [Cucumis sativus]
Length = 1573
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/547 (32%), Positives = 287/547 (52%), Gaps = 7/547 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L + L +++HALV K+S + L+ +Y+ V+ +A F +P+
Sbjct: 899 IILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPEL 958
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-- 125
+ WN++I +YA + +A F++LLR LKPD FT A + RACS + G F
Sbjct: 959 DLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDE--GEYFTL 1016
Query: 126 ---VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VH AI G+ DS S+AL+ YSK +DEA + G D DL N+++ G+
Sbjct: 1017 GSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAIMFGYIK 1076
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
K+L+ F M +G DE TL I L G+ I + +K F++ +V
Sbjct: 1077 SNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWV 1136
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
SS ++ MY +C M +A +F + PD V W+ +I+GY + GD AL + + + G
Sbjct: 1137 SSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGV 1196
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D A+++ A++ + G IH V++ + L V ++LVDMY KCG + +
Sbjct: 1197 QPDEYTFATLIKASSCLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYR 1256
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF M R ++ +N+++LGL HG +A FR + G+ PD+ TF +L AC H GL
Sbjct: 1257 VFRKMDVRKVVFWNAMLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGL 1316
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
++ + F M + YGI + EHY +V LG AG ++EA + I S+P ++ ALL
Sbjct: 1317 FSEAYKYFDAMFKTYGITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALL 1376
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C G+++ A+ VA +L DP + V+LSN YA +WDDV R+ + ++K
Sbjct: 1377 GACRTKGDAETAKRVADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKK 1436
Query: 543 EAGVSWV 549
+ G SW+
Sbjct: 1437 DPGFSWI 1443
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 188/413 (45%), Gaps = 32/413 (7%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++ +H K D F + LV +Y ++ AR+LFDK P+R LWN +++AY
Sbjct: 736 SETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVE 795
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
++A F R+ PD C+ NSD+ R H
Sbjct: 796 NSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGV--NSDVSNNRKRH-------------- 839
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ V AY A+K+F ++ N ++ F H G ++ F +LR
Sbjct: 840 -AEQVKAY--------AMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTI 890
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D TLV ++S L +G+ IH +KSSF VS+ L++MY++ + +A
Sbjct: 891 GHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEK 950
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA---K 318
F + DL++W+ +I+ Y+Q +A+ FR L G K D +ASVL A + +
Sbjct: 951 TFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDE 1010
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
G+ +H Y I+ G VS+AL+D+YSK G + + + ++ ++N++
Sbjct: 1011 GEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLASWNAI 1070
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN--DGREI 429
+ G + +A E F + E G+ DE T + + A G L+N G++I
Sbjct: 1071 MFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKAS--GCLINLKQGKQI 1121
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/419 (28%), Positives = 189/419 (45%), Gaps = 44/419 (10%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K HA + + L D + L+ +Y+ L SAR +FDK+ R + WNSI+ AYA
Sbjct: 631 KRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAAYA-- 688
Query: 83 HRFNDAKSLFKNLLRT-----QLKPDNFTYACITRACSENSDLPG-----LRFVHGGAIV 132
+F D S ++N+L L+ F+ +T A L VHG A+
Sbjct: 689 -QFAD--SSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVK 745
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G D S ALV Y K L+ +A +FD + + D VL N M+ + F D++L+
Sbjct: 746 IGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRF 805
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F R G PD L +I G+ S +S + H + V + + M+
Sbjct: 806 FSAFHRSGFXPDFSNLHCVIGGV--NSDVSNNRKRHA----------EQVKAYAMKMFP- 852
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ ++F W+ +T + G A+ F+ L D V + +
Sbjct: 853 ---FDQGSNIF---------AWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVII 900
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+AA + ++ G IH VI+ F V VS++L++MYSK G + + F E ++
Sbjct: 901 LSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVYAAEKTFINSPELDL 960
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
I++N++I + +A FRD++ GL PD+ T +++L AC G D E FT
Sbjct: 961 ISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLRACSTG----DEGEYFT 1015
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 107/221 (48%), Gaps = 10/221 (4%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +G+ H + S Y+++ L++MY++C + SA VF+ DLVTW++++
Sbjct: 627 LKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVTWNSILAA 686
Query: 281 YSQQGD--YGKALYYFRKLNMQ---GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
Y+Q D Y L FR + G + +A +L S V +HGY ++
Sbjct: 687 YAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSETVHGYAVKI 746
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
GFEL + VS ALV++Y K G +G +F+ M ER+ + +N ++ + F +A FF
Sbjct: 747 GFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVENSFQDEALRFF 806
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
G PD FS L C GG+ +D R E+
Sbjct: 807 SAFHRSGFXPD---FSNLHCVI--GGVNSDVSNNRKRHAEQ 842
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 9/201 (4%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
R+ +DL + H + SG D ++ L+T YSK + A +VFD SD DLV
Sbjct: 619 RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLV 678
Query: 172 LCNSMISGFAHCGFWDKS-------LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
NS+++ +A F D S +LF + G + TL L+ + V
Sbjct: 679 TWNSILAAYAQ--FADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVS 736
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +HG+ +K F+ +VS LV++Y + + A +F+ + D V W+ ++ Y +
Sbjct: 737 ETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKMPERDAVLWNVMLKAYVEN 796
Query: 285 GDYGKALYYFRKLNMQGKKAD 305
+AL +F + G D
Sbjct: 797 SFQDEALRFFSAFHRSGFXPD 817
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+A A++ G H ++ G +++ L+ MYSKCG L QVF+ S+R+++T
Sbjct: 620 SAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDKSSDRDLVT 679
Query: 375 YNSVI 379
+NS++
Sbjct: 680 WNSIL 684
>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 877
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/534 (31%), Positives = 286/534 (53%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L +++HA+V + +D F A LV +Y+ + A ++F K P+ V WN+ I
Sbjct: 216 RDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFI 275
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
L A L + + L P+ FT + I +AC+ + R +HG + +
Sbjct: 276 SGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANAD 335
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ + LV Y+K L+D+A KVFD + DLVL N++ISG +H ++L LF M
Sbjct: 336 SDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRM 395
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G + TL ++ +S + +H K F S +V + L+ Y +C+C+
Sbjct: 396 RKEGFDVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCL 455
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
N AY VF D++ ++++IT SQ A+ F ++ +G DP +++S+L A
Sbjct: 456 NYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNAC 515
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H ++I+ F V +ALV Y+KCG + F + E+ +++++
Sbjct: 516 ASLSAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWS 575
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I GL HG +A + F ++++ ++P+ T +++LCAC H GLV++ + F M E
Sbjct: 576 AMIGGLAQHGHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEM 635
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+GI+ EHY M+ LLG AG L++A + S+P + AV GALL+ ++ + +L +
Sbjct: 636 FGIERTEEHYACMIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRL 695
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A +LF +P K V+L+NTYA G WDDV K+R + D+ ++KE +SWV
Sbjct: 696 AAEKLFILEPEKSGTHVLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVE 749
Score = 206 bits (523), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/414 (30%), Positives = 208/414 (50%), Gaps = 1/414 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP-QRSVFLWNSIIRAYALA 82
+LHAL L D F A LV +Y + AR++FD+ +R+ WN ++ AY
Sbjct: 121 QLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKN 180
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R + A +F ++ ++P+ F ++C+ AC+ + DL R VH I +G +D T+
Sbjct: 181 DRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTA 240
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV YSKL I A VF V + D+V N+ ISG G +L+L M G
Sbjct: 241 NALVDMYSKLGDIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ +TL ++ ++G+ IHGF +K++ DS +Y++ LV MYA+ ++ A V
Sbjct: 301 PNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKV 360
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + DLV W+ALI+G S + +AL F ++ +G + +A+VL + A +
Sbjct: 361 FDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAI 420
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
+H + GF V + L+D Y KC L +VFE +II + S+I L
Sbjct: 421 SDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITAL 480
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
A + F +++ KGL+PD S+LL AC G+++ + +
Sbjct: 481 SQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 534
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 136/572 (23%), Positives = 262/572 (45%), Gaps = 55/572 (9%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
QSL + +HA + K+ L + L+ Y+ + SAR +FD+ P W+S++
Sbjct: 18 QSLLQGAHIHAHLLKSGLF--AVFRNHLLSFYSKCRLPGSARRVFDEIPDPCHVSWSSLV 75
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
AY+ DA F+++ ++ + F + + C+ ++ G + +H A+ +GLG
Sbjct: 76 TAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLK-CAPDAGF-GTQ-LHALAMATGLG 132
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++ALV Y +DEA VFD + + V N ++S + ++++F
Sbjct: 133 GDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAYVKNDRCSHAVKVFGE 192
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G P+E+ +++ L G+ +H +++ +D + ++ LV MY++
Sbjct: 193 MVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKDVFTANALVDMYSKLGD 252
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A VF + D+V+W+A I+G G AL ++ G + ++S+L A
Sbjct: 253 IRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKA 312
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A S G IHG++++ + ++ LVDMY+K G L +VF+ + +R+++ +
Sbjct: 313 CAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKHGLLDDAKKVFDWIPQRDLVLW 372
Query: 376 NSVILGLGLHGFTY-QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
N++I G HG + +A F + ++G + + +T +A+L + ++D R++ +
Sbjct: 373 NALISGCS-HGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKSTASLEAISDTRQVHA-LA 430
Query: 435 EEYGIQAKTE---------------HYIY----------------MVKLLGLAGNLEEAY 463
E+ G + + +Y Y M+ L + E+A
Sbjct: 431 EKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDIIAFTSMITALSQCDHGEDAI 490
Query: 464 S-FIWSLPKPVDP---AVSGALLSCCHIYGNSDLAEIVAH---QLFENDPRKGAYKVMLS 516
F+ L K +DP +S L +C + ++ AH + F +D G L
Sbjct: 491 KLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDVFAGN---ALV 547
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
TYA+ G +D D+ +GL ++ VSW
Sbjct: 548 YTYAKCGSIEDA-----DLAFSGLPEKGVVSW 574
>gi|224119830|ref|XP_002318172.1| predicted protein [Populus trichocarpa]
gi|222858845|gb|EEE96392.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 300 bits (767), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 287/544 (52%), Gaps = 7/544 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L K +S + K++HA + S+ + F +K++ L L A ++F++ + +
Sbjct: 36 LLSLIKQCKSKNLLKQIHAQMLINSIPKPNFLLSKIIDLKDL----AYASLVFNQLTKPN 91
Query: 69 VFLWNSIIRAYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
++ +N ++R A +++ L+ L LK +NFTY + AC L + H
Sbjct: 92 IYAFNVMLRGLATTWKKYDFCVELYYKLKSLGLKANNFTYPFLFIACGNVRGLVHGKIGH 151
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+GL D + +L+T Y++ + A KVFD + D DLV NSMISG++ GF
Sbjct: 152 CLVFKAGLDGDEYVNHSLITMYARCGEMGFARKVFDEMGDRDLVSWNSMISGYSKMGFTK 211
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ LF M G PDE TLV ++ + L +G+ + GF L+ + Y+ S L+
Sbjct: 212 EAIGLFMEMREEGFEPDEMTLVSVLGACGDLGDLGLGRWVEGFVLEKKMEVNSYMGSALI 271
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY +C + SA VF+S+ + D+VTW+A+ITGY+Q G +A+ F + G D V
Sbjct: 272 DMYGKCGDLISARRVFDSMPNKDVVTWNAIITGYAQNGASNEAIVLFNGMREAGPHPDRV 331
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ VL+A + + G + + + G + V V+SAL+DMY+KCG L ++VFE+M
Sbjct: 332 TMIEVLSACSTIGALDLGKWVETHASEKGLQHDVYVASALIDMYAKCGSLDDAVRVFESM 391
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVND 425
+N +++N++I L HG +A FR + + + P++ TF +L AC H GLV++
Sbjct: 392 PHKNEVSWNAMISALAFHGQAQEALSLFRRMSKDNGTVQPNDITFIGVLSACVHAGLVDE 451
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR++F M +G+ K EHY MV L AG L EA+ I +P D V G+LL C
Sbjct: 452 GRQLFESMNLSFGLVPKVEHYSCMVDLCARAGLLYEAWDLIKKMPGKPDEIVLGSLLGAC 511
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
N+D+ E V E + V+ S YA RWDD K+R + G+ K G
Sbjct: 512 QRRRNADVGERVIQLFLEMELSNSGNYVISSKIYANMRRWDDSAKMRVLMRQCGVSKTPG 571
Query: 546 VSWV 549
SW+
Sbjct: 572 CSWI 575
>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 816
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 285/556 (51%), Gaps = 10/556 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+LS + L R +E+H +V + F T +V LYA + A +F++ PQR
Sbjct: 148 LLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMPQRD 207
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+++ YA A + + KPD+ T + A ++ L R +HG
Sbjct: 208 LVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHG 267
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A +G ++A++ Y K + A VF G+S ++V N+MI G+A G ++
Sbjct: 268 YAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSRNVVSWNTMIDGYAQNGESEE 327
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ F ML G P +++G + L G+ +H + V + L+S
Sbjct: 328 AFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLIS 387
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C ++ A VF +L H +VTW+A+I GY+Q G +AL F ++ K D
Sbjct: 388 MYSKCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFT 447
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ SV+ A A + IHG I+ + +V V +AL+D ++KCG + ++F+ M
Sbjct: 448 LVSVITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQ 507
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
ER++IT+N++I G G +G +A + F ++ + P+E TF +++ AC H GLV +G
Sbjct: 508 ERHVITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMY 567
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M E YG++ +HY MV LLG AG L++A+ FI +P V GA+L C I+
Sbjct: 568 YFESMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIH 627
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N +L E A +LF+ DP G Y V+L+N YA WD V ++R + G++K G S
Sbjct: 628 KNVELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSL 687
Query: 549 V----------SGSSN 554
V SGS+N
Sbjct: 688 VELRNEVHTFYSGSTN 703
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/399 (26%), Positives = 208/399 (52%), Gaps = 7/399 (1%)
Query: 23 KELHA---LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
KELH L+ K + + TKL+ L+ N + A +F+ + L++++++ Y
Sbjct: 58 KELHQILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGY 117
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A DA ++ + ++ P + + + + EN DL R +HG I +G +
Sbjct: 118 AKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNL 177
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+A+V Y+K I++A K+F+ + DLV N++++G+A GF +++Q+ M
Sbjct: 178 FAMTAVVNLYAKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEA 237
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G+ PD TLV ++ + + L +G+ IHG+ ++ F+ V++ ++ Y +C + SA
Sbjct: 238 GQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSA 297
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF + ++V+W+ +I GY+Q G+ +A F K+ +G + V + L A A
Sbjct: 298 RLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANL 357
Query: 320 ANVWPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G +H + + GF++SVM ++L+ MYSKC + + VF + + ++T+N+
Sbjct: 358 GDLERGRYVHRLLDEKKIGFDVSVM--NSLISMYSKCKRVDIAASVFGNLKHKTVVTWNA 415
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ILG +G +A F ++ + PD T +++ A
Sbjct: 416 MILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVSVITA 454
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 161/306 (52%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
I +G + + + L++ + K + I EA +VF+ V VL ++M+ G+A ++
Sbjct: 68 IKNGFYNEHLFQTKLISLFCKFNSITEAARVFEPVEHKLDVLYHTMLKGYAKNSTLRDAV 127
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+ ++ M P Y L+ E L G+ IHG + + F S + + +V++Y
Sbjct: 128 RFYERMRCDEVMPVVYDFTYLLQLSGENLDLRRGREIHGMVITNGFQSNLFAMTAVVNLY 187
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + AY +F + DLV+W+ ++ GY+Q G +A+ ++ G+K D + +
Sbjct: 188 AKCRQIEDAYKMFERMPQRDLVSWNTVVAGYAQNGFARRAVQVVLQMQEAGQKPDSITLV 247
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SVL A A + G IHGY + GFE V V++A++D Y KCG + VF+ MS R
Sbjct: 248 SVLPAVADLKALRIGRSIHGYAFRAGFEYMVNVATAMLDTYFKCGSVRSARLVFKGMSSR 307
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
N++++N++I G +G + +AF F ++++G+ P + L AC + G + GR +
Sbjct: 308 NVVSWNTMIDGYAQNGESEEAFATFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVH 367
Query: 431 TRMTEE 436
+ E+
Sbjct: 368 RLLDEK 373
>gi|147853412|emb|CAN82303.1| hypothetical protein VITISV_013933 [Vitis vinifera]
Length = 549
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 267/498 (53%), Gaps = 9/498 (1%)
Query: 59 ILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
I D T + +VF +N+II + + ++ + + PD FT+ C +AC
Sbjct: 14 IFSDPTHEINVFAFNAIISGFITNGFPEEGFEFYQKMRNEGVMPDKFTFPCAIKACL--- 70
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
D+ ++ +HG GL D SALV Y K L++ A F+ + D+VL N+M++
Sbjct: 71 DVLEIKKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVN 130
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
G+A G ++ L+ F M P +T+ G++S L+ G+ IHGF +K +DS
Sbjct: 131 GYAQIGQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDS 190
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
VS+ L+ MY +C C+ A +F + D+ +W+++ + + Q GD+ L ++
Sbjct: 191 GVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRML 250
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS------VMVSSALVDMYS 352
G + D V + +VL A + A + G IHGY+I G V++ +A++DMY+
Sbjct: 251 GAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYA 310
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG + VFE M +++ ++N +I+G G+HG+ +A E F + E L PDE TF
Sbjct: 311 KCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVG 370
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+L AC H G V+ GR +M +Y + EHY ++ +LG AG L+EAY ++P
Sbjct: 371 VLSACSHAGFVSQGRNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIE 430
Query: 473 VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
+P V ALL+ C ++ ++ LAE+ A ++FE +P V++SN Y GR+++V+++R
Sbjct: 431 ANPVVWRALLAACRLHKHAVLAEVAAQRVFELEPEHCGSYVLMSNVYGAVGRYEEVLEVR 490
Query: 533 DDIVDNGLRKEAGVSWVS 550
+ +RK G SW+
Sbjct: 491 HTMRQQNVRKTPGCSWIE 508
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 176/374 (47%), Gaps = 14/374 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H L+ K L D F + LV Y ++ A++ F++ P R V LWN+++ YA
Sbjct: 76 KKIHGLLFKFGLELDVFIGSALVNCYLKFGLMEHAQVAFEELPIRDVVLWNAMVNGYAQI 135
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+F F+ + + P FT I + DL R +HG A+ G S
Sbjct: 136 GQFEMVLETFRRMNDESVVPSRFTVTGILSVFAVMGDLNNGRIIHGFAMKMGYDSGVAVS 195
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y K I++A+++F+ + + D+ NS+ S CG D +L+L D ML G
Sbjct: 196 NSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSVHEQCGDHDGTLRLLDRMLGAGIQ 255
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF--DSYDY----VSSVLVSMYARCNCM 256
PD T+ ++ + L G+ IHG+ + S D D + + ++ MYA+C M
Sbjct: 256 PDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKDGKDIDDVLLKNAVIDMYAKCGSM 315
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A+ VF + + D+ +W+ +I GY G +AL F ++ K D V VL+A
Sbjct: 316 RDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEMFSRMCEVQLKPDEVTFVGVLSAC 375
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVS----SALVDMYSKCGYLGLGIQVFETMS-ERN 371
+ + V G ++ Q + V + + ++DM + G L ++ TM E N
Sbjct: 376 SHAGFVSQG---RNFLAQMKSKYDVAPTIEHYTCVIDMLGRAGQLDEAYELALTMPIEAN 432
Query: 372 IITYNSVILGLGLH 385
+ + +++ LH
Sbjct: 433 PVVWRALLAACRLH 446
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 123/271 (45%), Gaps = 10/271 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ + +H K + L+ +Y + A +F+ ++ +F WNSI
Sbjct: 173 LNNGRIIHGFAMKMGYDSGVAVSNSLIDMYGKCKCIEDALEIFEMMREKDIFSWNSIXSV 232
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + L +L ++PD T + ACS + L R +HG IVSGLG+D
Sbjct: 233 HEQCGDHDGTLRLLDRMLGAGIQPDLVTVTTVLPACSHLAALMHGREIHGYMIVSGLGKD 292
Query: 139 S------ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
+ +A++ Y+K + +A VF+ + + D+ N MI G+ G+ +++L++
Sbjct: 293 GKDIDDVLLKNAVIDMYAKCGSMRDAHLVFERMXNKDVASWNIMIMGYGMHGYGNEALEM 352
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMY 250
F M + PDE T VG++S +S G+ +KS +D + + ++ M
Sbjct: 353 FSRMCEVQLKPDEVTFVGVLSACSHAGFVSQGRNFLA-QMKSKYDVAPTIEHYTCVIDML 411
Query: 251 ARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
R ++ AY + ++ + V W AL+
Sbjct: 412 GRAGQLDEAYELALTMPIEANPVVWRALLAA 442
>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1005
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 167/541 (30%), Positives = 284/541 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + +L + +H+L + D F + LV +Y+ + A +F +
Sbjct: 336 VLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVDMYSKCGLAGDALKVFVRIEDPD 395
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W++II + +A +FK + + + P+ FT A + A ++ DL +H
Sbjct: 396 VVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHA 455
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G D+ +ALVT Y K+ + + +VF+ ++ DL+ N+++SGF D
Sbjct: 456 CVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATTNRDLISWNALLSGFHDNETCDT 515
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L++F+ ML G P+ YT + ++ S + +G+ +H +K+S D D+V + LV
Sbjct: 516 GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVD 575
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ + A +FN L DL W+ ++ GY+Q G KA+ F ++ +G K +
Sbjct: 576 MYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFT 635
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+AS L+ ++ A + G +H I+ G + V+SALVDMY+KCG + VF+ +
Sbjct: 636 LASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLV 695
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+ +++N++I G HG +A + F ++++G PDE TF +L AC H GL+ +G++
Sbjct: 696 SRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKK 755
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F +++ YGI EHY MV +LG AG E SFI + + + +L C ++
Sbjct: 756 HFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMH 815
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN + E A +LFE +P + ++LSN +A G WDDV +R + G++KE G SW
Sbjct: 816 GNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSW 875
Query: 549 V 549
V
Sbjct: 876 V 876
Score = 191 bits (485), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 124/427 (29%), Positives = 212/427 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S L+ K +H V K+ + D LV +YA A +F + P+R
Sbjct: 134 MLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 193
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I + + A +LF + R ++ + FTYA +ACS DL + VH
Sbjct: 194 VVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQVHA 253
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI G D SALV Y+K + A +VF + + V N++++GFA G +K
Sbjct: 254 EAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGDAEK 313
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L LF M ++TL ++ G L GQ +H ++ + +++S LV
Sbjct: 314 VLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCCLVD 373
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C A VF + PD+V+WSA+IT Q+G +A F+++ G +
Sbjct: 374 MYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFT 433
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+AS+++AA +++ G IH V ++GFE V +ALV MY K G + G +VFE +
Sbjct: 434 LASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRVFEATT 493
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R++I++N+++ G + F ++ +G NP+ TF ++L +C V+ G++
Sbjct: 494 NRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 553
Query: 429 IFTRMTE 435
+ ++ +
Sbjct: 554 VHAQIVK 560
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 199/407 (48%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA K D F + LV LYA + A +F P+++ WN+++ +A
Sbjct: 249 KQVHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQM 308
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+LF + +++ FT + + + C+ + +L + VH AI G D S
Sbjct: 309 GDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFIS 368
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
LV YSK L +A+KVF + DPD+V +++I+ G ++ ++F M G
Sbjct: 369 CCLVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVI 428
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+++TL L+S + L G+ IH K F+ + V + LV+MY + + V
Sbjct: 429 PNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGSVQDGCRV 488
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + + DL++W+AL++G+ L F ++ +G + S+L + + ++V
Sbjct: 489 FEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDV 548
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H ++++ + + V +ALVDMY+K +L +F + +R++ + ++ G
Sbjct: 549 DLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGY 608
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
G +A + F + +G+ P+E T ++ L C ++ GR++
Sbjct: 609 AQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQL 655
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/310 (30%), Positives = 162/310 (52%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y+ + R C+ DL + +HG I SG+ DS ++LV Y+K + A KVF +
Sbjct: 131 YSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIP 190
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ D+V ++I+GF G+ ++ LF M R G +E+T + L G+
Sbjct: 191 ERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEFGKQ 250
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H +K S +V S LV +YA+C M A VF + + V+W+AL+ G++Q GD
Sbjct: 251 VHAEAIKVGDFSDLFVGSALVDLYAKCGEMVLAERVFLCMPKQNAVSWNALLNGFAQMGD 310
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
K L F ++ +++VL A S N+ G ++H I+ G EL +S
Sbjct: 311 AEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDEFISCC 370
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
LVDMYSKCG G ++VF + + ++++++++I L G + +A E F+ + G+ P+
Sbjct: 371 LVDMYSKCGLAGDALKVFVRIEDPDVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPN 430
Query: 407 ESTFSALLCA 416
+ T ++L+ A
Sbjct: 431 QFTLASLVSA 440
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 58/108 (53%)
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+ +L A ++ G IHG VI+ G + ++LV++Y+KCG +VF + E
Sbjct: 132 SGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 191
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
R+++++ ++I G G+ A F ++ +G+ +E T++ L AC
Sbjct: 192 RDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKAC 239
>gi|224120114|ref|XP_002318245.1| predicted protein [Populus trichocarpa]
gi|222858918|gb|EEE96465.1| predicted protein [Populus trichocarpa]
Length = 513
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 157/475 (33%), Positives = 268/475 (56%), Gaps = 4/475 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
+N+++ YA+ R A +++ +++ PD FT+ + ++C++ + R VHG I
Sbjct: 2 FNALVSGYAIGDRPKTAFLVYRRIVKDGFLPDMFTFPAVLKSCAKFVGIGEGRQVHGVII 61
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G + ++LV YS +A +VFD + D+V +ISG+ G +D+++
Sbjct: 62 KMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRDVVSWTGVISGYVRAGLFDEAVG 121
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF LR+ P+ T V ++ LSVG+GIHG KS+F VS+ L+ MY
Sbjct: 122 LF---LRMDVEPNAATFVSVLVACGRKGYLSVGKGIHGLSFKSAFGVGLEVSNALMDMYV 178
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C C+ A VF+ L D+V+W+++I+G Q +AL F+ + G + D +++ S
Sbjct: 179 KCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKEALELFQDMQSSGIEPDGIILTS 238
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
VL+A A+ + G +H ++ + + + + +A+VDMY+KCG + + +Q+F M +N
Sbjct: 239 VLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVDMYAKCGCIEMSMQIFNGMPHKN 298
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++T+N+++ GL +HG Y+ E F +++ G+ P+E TF A+L ACCH GLVN+GR+ F
Sbjct: 299 VLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVTFLAILTACCHCGLVNEGRQYFN 358
Query: 432 RMT-EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M ++Y + + EHY MV LL A L+EA ++P D + GALLS C GN
Sbjct: 359 WMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKAMPMSPDVRIMGALLSACKENGN 418
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++L + + + E D V+LSN +A + RWDDV ++R + + G++K G
Sbjct: 419 TELPQEILDRFVELDSHDSGVYVLLSNIHAINQRWDDVTRIRRLMKEKGIKKPPG 473
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/429 (23%), Positives = 177/429 (41%), Gaps = 39/429 (9%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + +++H ++ K + + + LV Y++ A +FD+ R
Sbjct: 40 VLKSCAKFVGIGEGRQVHGVIIKMGFVCNIYVENSLVHFYSVCKRFGDASRVFDEMLVRD 99
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +I Y A F++A LF LR ++P+ T+ + AC L + +HG
Sbjct: 100 VVSWTGVISGYVRAGLFDEAVGLF---LRMDVEPNAATFVSVLVACGRKGYLSVGKGIHG 156
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ S G S+AL+ Y K + A +VFD +++ D+V S+ISG C +
Sbjct: 157 LSFKSAFGVGLEVSNALMDMYVKCGCLPGAKQVFDELAEKDIVSWTSIISGLVQCNCPKE 216
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+LF M G PD L ++S L G+ +H + + + + +V
Sbjct: 217 ALELFQDMQSSGIEPDGIILTSVLSACARLGALDYGRWVHEHIDRKAIKWDIQIGTAMVD 276
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C C+ + +FN + H +++TW+AL+ G + G K L F ++ G + + V
Sbjct: 277 MYAKCGCIEMSMQIFNGMPHKNVLTWNALLNGLAMHGHAYKVLELFEEMVRVGMRPNEVT 336
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFET 366
++L A V G ++ + L + +VD+ + L +++ +
Sbjct: 337 FLAILTACCHCGLVNEGRQYFNWMKGQQYNLPPRLEHYGCMVDLLCRARLLDEALELTKA 396
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M ++PD ALL AC G
Sbjct: 397 MP----------------------------------MSPDVRIMGALLSACKENGNTELP 422
Query: 427 REIFTRMTE 435
+EI R E
Sbjct: 423 QEILDRFVE 431
>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Glycine max]
Length = 1227
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/531 (32%), Positives = 283/531 (53%), Gaps = 1/531 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ K +H V K L+ Y + + SA LFD+ R V WNS+I
Sbjct: 569 VGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISG 628
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + A F +L ++ D T AC+ L R +HG + + R+
Sbjct: 629 CVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSRE 688
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ ++ L+ YSK +++AI+ F+ + +V S+I+ + G +D +++LF M
Sbjct: 689 VMFNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMES 748
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G +PD Y++ ++ + L G+ +H + K++ VS+ L+ MYA+C M
Sbjct: 749 KGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEE 808
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
AY VF+ + D+V+W+ +I GYS+ +AL F ++ + + D + +A +L A
Sbjct: 809 AYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKE-SRPDGITMACLLPACGS 867
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IHG ++++G+ + V++AL+DMY KCG L +F+ + E+++IT+ +
Sbjct: 868 LAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLLFDMIPEKDLITWTVM 927
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G G+HG +A F+ + G+ PDE TF+++L AC H GL+N+G F M E
Sbjct: 928 ISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLLNEGWGFFNSMISECN 987
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
++ K EHY MV LL GNL +AY+ I ++P D + GALL C I+ + +LAE VA
Sbjct: 988 MEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLCGCRIHHDVELAEKVA 1047
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+FE +P Y V+L+N YAE +W++V KLR+ I GL+K G SW+
Sbjct: 1048 EHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKSPGCSWI 1098
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 123/428 (28%), Positives = 216/428 (50%), Gaps = 2/428 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
N + +L+L H+ L K +H++++ + + KLV +Y L R +FD
Sbjct: 451 LNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGALREGRRIFD 510
Query: 63 KT-PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
VFLWN ++ YA + ++ LFK + + + +++T++CI + + +
Sbjct: 511 HILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILKCFATLGRVG 570
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ +HG G G + ++L+ Y K +D A K+FD + D D+V NSMISG
Sbjct: 571 ECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVDSAHKLFDELGDRDVVSWNSMISGCV 630
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
GF +L+ F ML L D TLV ++ LS+G+ +HG +K+ F
Sbjct: 631 MNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQGVKACFSREVM 690
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
++ L+ MY++C +N A F + +V+W++LI Y ++G Y A+ F ++ +G
Sbjct: 691 FNNTLLDMYSKCGNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLYDDAIRLFYEMESKG 750
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D + SVL A A ++ G +H Y+ ++ L + VS+AL+DMY+KCG +
Sbjct: 751 VSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALCLPVSNALMDMYAKCGSMEEAY 810
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
VF + ++I+++N++I G + +A + F + ++K PD T + LL AC
Sbjct: 811 LVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAE-MQKESRPDGITMACLLPACGSLA 869
Query: 422 LVNDGREI 429
+ GR I
Sbjct: 870 ALEIGRGI 877
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 3/138 (2%)
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I + + GD A+ R Q + D +S+L A+ + G ++H + +G
Sbjct: 425 ICKFCEVGDLRNAVELLRM--SQKSELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGI 482
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFE-TMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ ++ + LV MY CG L G ++F+ +S+ + +N ++ G ++ F+
Sbjct: 483 PIEGVLGAKLVFMYVSCGALREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFK 542
Query: 397 DIIEKGLNPDESTFSALL 414
+ + G+ + TFS +L
Sbjct: 543 KMQKLGITGNSYTFSCIL 560
>gi|242094978|ref|XP_002437979.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
gi|241916202|gb|EER89346.1| hypothetical protein SORBIDRAFT_10g005810 [Sorghum bicolor]
Length = 657
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 173/510 (33%), Positives = 281/510 (55%), Gaps = 12/510 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LH L A D F A+ L +LY + + AR +FD P LWN+++
Sbjct: 134 RTLHGLSVAAGYAADTFVASALAKLYFKLSKVDDARKVFDAVPSPDTILWNTLLAGLP-- 191
Query: 83 HRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ A F ++ +++PD+ T A RA +E S + R VHG + GL
Sbjct: 192 --GSVALEAFVRMVEVGRVRPDSTTLASSLRAAAEASHVAMGRCVHGYGVKCGLAEHEHV 249
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L++ YSK +D A +FD + DPDLV N++ISG++ G + S++LF +
Sbjct: 250 VTGLMSLYSKCGDMDCARSLFDRMEDPDLVAYNALISGYSVNGMVESSVELFKELAASDW 309
Query: 202 TPDEYTLVGLISGLWEP---SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
P+ TLV +I ++ P LL+ + +H F +K+ D+ VS+ L ++Y R N M S
Sbjct: 310 RPNSSTLVAVIP-VYSPFGHELLA--RCLHAFVVKARLDADALVSTALTTLYCRLNDMES 366
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+++ + +W+A+I+GY+Q G A+ F+ + + +P I+S L+A A+
Sbjct: 367 ARSIFDAMPEKTMESWNAMISGYAQNGLTEMAVELFQLMQELNVQPNPTTISSTLSACAQ 426
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +H + + EL+V V +AL+DMY+KCG + +F+ M +N++++N++
Sbjct: 427 LGALSLGTWVHRIIAKENLELNVYVMTALIDMYAKCGSIAEARSIFDRMDNKNVVSWNAM 486
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G GLHG +A + ++ +++ + P STF ++L AC HGGLV++G+++F MT EY
Sbjct: 487 ISGYGLHGRGAEALKLYKSMLDACILPTSSTFLSVLYACSHGGLVDEGQKVFRVMTNEYR 546
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK-PVDPAVSGALLSCCHIYGNSDLAEIV 497
I EH MV LLG AG L EA I P+ + P V GALLS C ++ NSDLA++
Sbjct: 547 ISPGIEHCTCMVDLLGRAGKLNEALDLISEFPQSAIGPGVWGALLSACMVHKNSDLAKLA 606
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
+ +LFE D Y V+LSN Y + +
Sbjct: 607 SQKLFELDSENAGYYVLLSNLYTSKKHYSE 636
>gi|115484979|ref|NP_001067633.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|62734753|gb|AAX96862.1| Similar to selenium-binding protein [Oryza sativa Japonica Group]
gi|77549625|gb|ABA92422.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113644855|dbj|BAF27996.1| Os11g0256100 [Oryza sativa Japonica Group]
gi|125597201|gb|EAZ36981.1| hypothetical protein OsJ_21321 [Oryza sativa Japonica Group]
Length = 582
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 286/530 (53%), Gaps = 7/530 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA--LA 82
+HA + +P +AT L+ A L AR +FD P R ++WN+++RA+A A
Sbjct: 44 IHARAVVLGISANPAFATSLITAVA-PACLAYARRVFDAAPSRDAYMWNTLLRAHAHSRA 102
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
H DA +L+ + + PD++TY + AC+ R HG A+ L RD S
Sbjct: 103 HA-RDALALYARMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALARDGFVS 161
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLC-NSMISGFAHCGFWDKSLQLFDWMLRLGK 201
SAL++ YS+ + +A +VF D V+ +M++G+A F+ +++ LF M+ G
Sbjct: 162 SALISMYSQEGEVRDAERVFAERDDARTVVSWTAMVAGYAQNCFFGEAVTLFSDMVAAGV 221
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+E TL+ + L L VG+ +HGF +K FD+ + + L++MY RC A
Sbjct: 222 LPNEITLISFLPCLRGQEWLPVGEMVHGFVVKLGFDANVPMVNALITMYGRCGSAPVARV 281
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+FN + LV+W+ ++ Y Q GD +A+ +FR++ + D V + SVL+A A+S
Sbjct: 282 LFNGMSSRTLVSWNTMVAMYEQHGDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSGA 341
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER--NIITYNSVI 379
+ G +H HG + + + LVDMY+KCG + +VF + R ++++++++I
Sbjct: 342 LGTGKWVHELARSHGLDTDARIGNVLVDMYAKCGEIAYAKEVFHSHGLRGHSVVSWSAMI 401
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
HG +A + F + +G+ P+ TF+A+L ACCH GLV++G + F + +Y +
Sbjct: 402 NAYANHGEAEEALKLFSLMRNEGVRPNSFTFTAVLMACCHSGLVDEGLKHFNSIATDYQM 461
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV +LG AG L EAY I +P D V GA L C ++G +LAE VA
Sbjct: 462 SPTLEHYACMVDMLGRAGRLVEAYGIIRGMPIRPDKCVWGAFLGGCRLHGMVELAEYVAK 521
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+LF++ + V+++N Y E G +D ++R + + L+K AG S V
Sbjct: 522 ELFDSGSNDVTFYVLMANMYFEAGMLEDAERIRGVMKEMELKKTAGHSLV 571
>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Glycine max]
Length = 775
Score = 299 bits (766), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 181/530 (34%), Positives = 286/530 (53%), Gaps = 4/530 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++ HAL K + D F A+ L+ +Y ++ AR LFD+ P+R+ W ++I YA
Sbjct: 136 RQAHALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQ 195
Query: 83 HRFNDAKSLFKNLLRTQLKPDN---FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
++A LFK L+R + K N F + + A + + R VH A+ +GL
Sbjct: 196 ELADEAFELFK-LMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIV 254
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
++ALVT Y K +++A+K F+ + + + ++M++GFA G DK+L+LF M +
Sbjct: 255 SVANALVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQS 314
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G+ P E+TLVG+I+ + + G+ +HG+ LK ++ YV S LV MYA+C + A
Sbjct: 315 GELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDA 374
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
F + PD+V W+++ITGY Q GDY AL + K+ + G + + +ASVL A +
Sbjct: 375 RKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNL 434
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
A + G +H +I++ F L + + SAL MY+KCG L G ++F M R++I++N++I
Sbjct: 435 AALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMI 494
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
GL +G + E F + +G PD TF LL AC H GLV+ G F M +E+ I
Sbjct: 495 SGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMFDEFNI 554
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV +L AG L EA FI S + LL+ + + DL
Sbjct: 555 APTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYDLGAYAGE 614
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L E + + V+LS+ Y G+W+DV ++R + G+ KE G SW+
Sbjct: 615 KLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWI 664
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 223/462 (48%), Gaps = 8/462 (1%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
H+ L + + LHA + A L+ LYA + A ++FD + V WN +
Sbjct: 23 HKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSWNCL 82
Query: 76 IRAYALAHRFNDA---KSLFKNLLRTQ--LKPDNFTYACITRACSENSDLPGLRFVHGGA 130
I A++ + LF+ L+ + P+ T + A S SD R H A
Sbjct: 83 INAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALA 142
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ + D +S+L+ Y K L+ EA +FD + + + V +MISG+A D++
Sbjct: 143 VKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELADEAF 202
Query: 191 QLFDWML--RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+LF M GK +E+ ++S L L++ G+ +H +K+ V++ LV+
Sbjct: 203 ELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANALVT 262
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + A F + + +TWSA++TG++Q GD KAL F ++ G+
Sbjct: 263 MYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFT 322
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ V+ A + + + G +HGY ++ G+EL + V SALVDMY+KCG + + FE +
Sbjct: 323 LVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAKCGSIVDARKGFECIQ 382
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ +++ + S+I G +G A + + G+ P++ T +++L AC + ++ G++
Sbjct: 383 QPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQ 442
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+ + +Y + + + G+L++ Y W +P
Sbjct: 443 MHAGII-KYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMP 483
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 161/323 (49%), Gaps = 7/323 (2%)
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C+ + L R +H +V+G + +++L+ Y+K S +A VFD +++ D+V
Sbjct: 20 CTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNKDVVSW 79
Query: 174 NSMISGFAHCGFWDKSL---QLFDWMLRLGKT--PDEYTLVGLISGLWEPSLLSVGQGIH 228
N +I+ F+ SL LF ++ KT P+ +TL G+ + S G+ H
Sbjct: 80 NCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAH 139
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ--GD 286
+K++ + +S L++MY + + A +F+ + + V+W+ +I+GY+ Q D
Sbjct: 140 ALAVKTACSHDVFAASSLLNMYCKTGLVFEARDLFDEMPERNAVSWATMISGYASQELAD 199
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
L+ + +GK + + SVL+A V G +H +++G V V++A
Sbjct: 200 EAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLVCIVSVANA 259
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
LV MY KCG L ++ FE +N IT+++++ G G + +A + F D+ + G P
Sbjct: 260 LVTMYVKCGSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPS 319
Query: 407 ESTFSALLCACCHGGLVNDGREI 429
E T ++ AC + +GR++
Sbjct: 320 EFTLVGVINACSDACAIVEGRQM 342
>gi|225433310|ref|XP_002282466.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Vitis vinifera]
Length = 625
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 304/556 (54%), Gaps = 20/556 (3%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L S +H+SL T++ H+ + L ++ ATKL+ YA+ +R++FD ++V
Sbjct: 30 LHFSVTHKSLKLTRQSHSRILSLGLSQNSLLATKLIFAYAICQHPYHSRLVFDSLQHKNV 89
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
FLWNS+I YA +N+A LF + + + PD+FT + +++ SE L + +HG
Sbjct: 90 FLWNSLINGYAKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK 149
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA---HCGFW 186
+I G D++ ++++++ Y K +E+ KVFD ++ + N +I+G+A +C F
Sbjct: 150 SIRIGFVSDTVVANSIMSMYCKCGNFEESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFR 209
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLI------SGLWEPSLLSVGQGIHGFCLKSSF---- 236
+++ + M PD YT+ L+ G W+ G+ +H + +K+
Sbjct: 210 EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDKGKWD-----YGRELHCYIVKNELVLGL 264
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
DS ++ L+ MY+R N + VF+ + ++ +W+A+I GY + GD +AL FR
Sbjct: 265 DSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRD 324
Query: 297 LN-MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + G + + V + SVL A + + + G IHG+ ++ V + +AL+DMYSKCG
Sbjct: 325 MQVIDGIEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCG 384
Query: 356 YLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
L +VFE S ++ I+++S+I G GLHG +A + +++ G+ PD T +L
Sbjct: 385 SLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC GLVN+G I++ + +YGI+ E + +V +LG AG L+ A FI ++P
Sbjct: 445 SACSRSGLVNEGLNIYSSVINDYGIEPTLEIFACIVDMLGRAGQLDPALDFIKAMPVEPG 504
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
P+V GAL+SC I+G+ ++ E+ L + +P + V +SN YA RWD V ++R
Sbjct: 505 PSVWGALVSCSIIHGDLEMQELAYRFLIQLEPENPSNYVSISNLYASSRRWDAVAEVRRM 564
Query: 535 IVDNGLRKEAGVSWVS 550
+ D LRK G SW+S
Sbjct: 565 MKDKRLRKVPGCSWIS 580
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF-DKTPQR 67
VL S L +++H + L + L+ +Y+ L SAR +F D + +
Sbjct: 341 VLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCK 400
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
W+S+I Y L + +A L+ +L+ ++PD T I ACS +
Sbjct: 401 DAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSACSRS 450
>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 722
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 189/586 (32%), Positives = 305/586 (52%), Gaps = 49/586 (8%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYAL---NNVLPSARILFDKTPQ 66
L L +S +S + ++HA L F ++L+ ++L + L +R+LF +
Sbjct: 13 LCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQIDC 72
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSENSDLPGLRF 125
++F+WN++IR Y+ + +A L+ +++ + P+NFT+ + +C+ S L
Sbjct: 73 PNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHE 132
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH I G D +AL+ YS ++ A +FD DLV N+MI G+A
Sbjct: 133 VHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNTMIKGYAEVNQ 192
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISG---LWEPSLLSVGQGIHGFCLKS--SFDSYD 240
+ +L LF M G PDE+T V L S L EP+ VG+ IH K+ S DS
Sbjct: 193 PESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPN---VGKQIHAQVYKNLRSIDSNI 249
Query: 241 YVSSVLVSMYARCNCMNSAYHVF--------------------------------NSLFH 268
+ S +V MYA+C +N A VF N +
Sbjct: 250 LLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHE 309
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D+++W+A+I+GYSQ G +AL F+++ G K D V + +VL+A A+ G +
Sbjct: 310 RDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRL 369
Query: 329 HGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT---YNSVILGLGL 384
+ I++G F + ++++A++DMY+KCG + +++F + +N+ T +NS+I GL
Sbjct: 370 YHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVG-KNMKTGFVFNSMIAGLAQ 428
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG A FR++I GL PDE TF +LCAC H GL+ +G+++F M YGI+ + E
Sbjct: 429 HGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQME 488
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV LLG G LEEAY + +P + + ALLS C +GN + EI +L E
Sbjct: 489 HYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQKLLEM 548
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ + GA V+LSN A+ +W++ ++R + D+G+RK G S++
Sbjct: 549 EAQHGARYVLLSNILADANQWEEARQVRKVMEDHGIRKPPGWSYIE 594
>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Glycine max]
Length = 824
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 176/535 (32%), Positives = 284/535 (53%), Gaps = 4/535 (0%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ SL+ +++H V K D + A L+ LY+ + A +F P R V WN
Sbjct: 158 KACLSLADGEKMHCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWN 217
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I + +A + + ++K D T + + C++++D+ G VH I
Sbjct: 218 AMISGFCQNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKH 277
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL D S+AL+ YSK + +A +VFDG+ DLV NS+I+ + +L F
Sbjct: 278 GLESDVFVSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFF 337
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYAR 252
ML +G PD T+V L S + S +G+ +HGF ++ + D V + LV+MYA+
Sbjct: 338 KEMLFVGMRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAK 397
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV--LIA 310
++ A VF L D+++W+ LITGY+Q G +A+ + + +G+ P
Sbjct: 398 LGSIDCARAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMME-EGRTIVPNQGTWV 456
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A + + G IHG +I++ L V V++ L+DMY KCG L + +F + +
Sbjct: 457 SILPAYSHVGALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQE 516
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+ +N++I LG+HG +A + F+D+ G+ D TF +LL AC H GLV++ + F
Sbjct: 517 TSVPWNAIISSLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCF 576
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M +EY I+ +HY MV L G AG LE+AY+ + ++P D ++ G LL+ C I+GN
Sbjct: 577 DTMQKEYRIKPNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGN 636
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++L + +L E D Y V+LSN YA G+W+ +K+R D GLRK G
Sbjct: 637 AELGTFASDRLLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPG 691
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 132/506 (26%), Positives = 261/506 (51%), Gaps = 20/506 (3%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
FNL F +S +++ K+LHAL+ +D T+LV LYA L + F
Sbjct: 54 FNLVF------RSCTNINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFK 107
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLP 121
++++F WNS++ AY R+ D+ LL + ++PD +T+ + +AC +D
Sbjct: 108 HIQRKNIFSWNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLSLADGE 167
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ H + G D +++L+ YS+ ++ A KVF + D+ N+MISGF
Sbjct: 168 KM---HCWVLKMGFEHDVYVAASLIHLYSRFGAVEVAHKVFVDMPVRDVGSWNAMISGFC 224
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G ++L++ D M D T+ ++ + + + G +H + +K +S +
Sbjct: 225 QNGNVAEALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVF 284
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
VS+ L++MY++ + A VF+ + DLV+W+++I Y Q D AL +F+++ G
Sbjct: 285 VSNALINMYSKFGRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDDPVTALGFFKEMLFVG 344
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLG 360
+ D + + S+ + + ++ G +HG+V++ E+ +++ +ALV+MY+K G +
Sbjct: 345 MRPDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCA 404
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACC 418
VFE + R++I++N++I G +G +A + + +++E+G + P++ T+ ++L A
Sbjct: 405 RAVFEQLPSRDVISWNTLITGYAQNGLASEAIDAY-NMMEEGRTIVPNQGTWVSILPAYS 463
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H G + G +I R+ + + ++ + G G LE+A S + +P+ +
Sbjct: 464 HVGALQQGMKIHGRLIKN-CLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWN 522
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFEN 504
A++S I+G+ + A QLF++
Sbjct: 523 -AIISSLGIHGHGE----KALQLFKD 543
>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
lyrata]
Length = 886
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 288/542 (53%), Gaps = 15/542 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA + L + F LV +Y L S+++L R + WN+++ +
Sbjct: 218 KQVHAYGLRKGEL-NSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQN 276
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSIT 141
+F +A + ++ ++PD FT + + ACS L + +H A+ +G L +S
Sbjct: 277 EQFLEALEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFV 336
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LG 200
SALV Y + +VFDG+ D + L N+MI+G+A + +++L LF M G
Sbjct: 337 GSALVDMYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAG 396
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+ T+ G++ S + IHGF +K D +V + L+ MY+R ++ A
Sbjct: 397 LLANSTTMAGVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAK 456
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA-----------DPVLI 309
+F + DLVTW+ +ITGY + AL K+ + +KA + + +
Sbjct: 457 RIFGKMEDRDLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITL 516
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
++L + A + + G IH Y I++ V V SALVDMY+KCG L + +VF+ +
Sbjct: 517 MTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPI 576
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN+IT+N +++ G+HG + A + R ++ +G+ P+E TF ++ AC H G+VN+G +I
Sbjct: 577 RNVITWNVIVMAYGMHGNSQDAIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKI 636
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIY 488
F M ++YG++ ++HY +V LLG AG ++EAY I +P+ D A + +LL C I+
Sbjct: 637 FYNMKKDYGVEPSSDHYACVVDLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIH 696
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N ++ EI A L + +P ++ V+L+N Y+ G W ++R ++ G+RKE G SW
Sbjct: 697 NNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSW 756
Query: 549 VS 550
+
Sbjct: 757 IE 758
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 114/430 (26%), Positives = 196/430 (45%), Gaps = 18/430 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
Q + K++HA V K D A LV LY + +FD+ +R+ WNS+
Sbjct: 107 QDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 166
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL---RFVHGGAIV 132
I + ++ A F+ +L ++P +FT + ACS GL + VH +
Sbjct: 167 ISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLR 226
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G +S + LV Y K+ + + + DLV N+++S + ++L+
Sbjct: 227 KG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEY 285
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-SFDSYDYVSSVLVSMYA 251
M+ G PD +T+ ++ +L G+ +H + LK+ S D +V S LV MY
Sbjct: 286 LREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 345
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIA 310
C + S VF+ +F + W+A+ITGY+Q +AL F ++ G A+ +A
Sbjct: 346 NCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANSTTMA 405
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
V+ A +S IHG+V++ G + V +AL+DMYS+ G + + ++F M +R
Sbjct: 406 GVVPACVRSGAFSKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDR 465
Query: 371 NIITYNSVILG-----------LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+++T+N++I G L LH + L P+ T +L +C
Sbjct: 466 DLVTWNTIITGYVFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAA 525
Query: 420 GGLVNDGREI 429
+ G+EI
Sbjct: 526 LSALAKGKEI 535
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 187/373 (50%), Gaps = 11/373 (2%)
Query: 55 PSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
PS I +P+ W ++R+ ++ +A + +++ +KPDNF + + +A
Sbjct: 48 PSKFISQSHSPE----WWIDLLRSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAV 103
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSIT-SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
++ D+ + +H G G DS+T ++ LV Y K KVFD +S+ + V
Sbjct: 104 ADLQDMDLGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSW 163
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL---ISGLWEPSLLSVGQGIHGF 230
NS+IS W+ +L+ F ML P +TLV + S P L +G+ +H +
Sbjct: 164 NSLISSLCSFEKWEMALEAFRCMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAY 223
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
L+ + ++ + LV+MY + + S+ + S DLVTW+ +++ Q + +A
Sbjct: 224 GLRKG-ELNSFIINTLVAMYGKMGKLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEA 282
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVD 349
L Y R++ ++G + D I+SVL A + + G +H Y +++G + + V SALVD
Sbjct: 283 LEYLREMVLEGVEPDGFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 342
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK-GLNPDES 408
MY C + G +VF+ M +R I +N++I G + + +A F ++ E GL + +
Sbjct: 343 MYCNCKQVLSGCRVFDGMFDRKIGLWNAMITGYAQNEYDEEALLLFIEMEESAGLLANST 402
Query: 409 TFSALLCACCHGG 421
T + ++ AC G
Sbjct: 403 TMAGVVPACVRSG 415
>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 734
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 178/528 (33%), Positives = 281/528 (53%), Gaps = 2/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+ H++ K D + + L+ +Y + AR LFD+ P+R+ W ++I YA +
Sbjct: 138 KQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASS 197
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A +F+ + R + + F + A + + + R VH AI +GL +
Sbjct: 198 DIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVA 257
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALVT Y+K +D+A++ F+ D + + ++M++G+A G DK+L+LF+ M G
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P E+TLVG+I+ + + G+ +H F K F YV S +V MYA+C + A
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + PD+V W+++ITGY Q GDY L + K+ M+ + + +ASVL A + A +
Sbjct: 378 FECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAAL 437
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H +I++GF+L V + SAL MY+KCG L G +F M R++I++N++I GL
Sbjct: 438 DQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWNAMISGL 497
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+G +A E F ++ +G+ PD TF LL AC H GLV+ G E F M +E+ I
Sbjct: 498 SQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDEFNIAPM 557
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV +L AG L EA FI S + LL C + N +L +L
Sbjct: 558 VEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVYAGEKLV 617
Query: 503 E-NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E P AY V+LS+ Y G ++V ++R + G+ KE G SW+
Sbjct: 618 ELGSPESSAY-VLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWI 664
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 231/461 (50%), Gaps = 7/461 (1%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ--RSVFLWN 73
++++ + + LHA + K + + + LYA N L A LFD + WN
Sbjct: 24 NKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWN 83
Query: 74 SIIRAYALAHRFND---AKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
S+I A++ H + A SLF+ ++R + P+ T A + A S SD+ + H
Sbjct: 84 SLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSV 143
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
A+ +G D S+L+ Y K + +A K+FD + + + V +MISG+A DK+
Sbjct: 144 AVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKA 203
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+++F+ M R + +E+ L ++S L + G+ +H +K+ + V++ LV+M
Sbjct: 204 VEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTM 263
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C ++ A F + +TWSA++TGY+Q GD KAL F K++ G +
Sbjct: 264 YAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTL 323
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
V+ A + V G +H + + GF L + V SA+VDMY+KCG L + FE + +
Sbjct: 324 VGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFECVQQ 383
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++ + S+I G +G + + + + P+E T +++L AC ++ G+++
Sbjct: 384 PDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLAALDQGKQM 443
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
R+ +YG + + + + G+L++ Y W +P
Sbjct: 444 HARII-KYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMP 483
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 160/324 (49%), Gaps = 6/324 (1%)
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDL--V 171
C+ N ++ R +H + +G ++ + Y+K + + A+ +FD ++D D V
Sbjct: 21 CTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDKDDV 80
Query: 172 LCNSMISGFAHCGFWDK---SLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGI 227
NS+I+ F+ ++ LF M+R P+ +TL G+ S S + G+
Sbjct: 81 SWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAGKQA 140
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
H +K+ YV S L++MY + + A +F+ + + V+W+ +I+GY+
Sbjct: 141 HSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIA 200
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
KA+ F + + + + + SVL+A V+ G +H I++G V V++AL
Sbjct: 201 DKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANAL 260
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
V MY+KCG L ++ FE ++N IT+++++ G G + +A + F + G+ P E
Sbjct: 261 VTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSE 320
Query: 408 STFSALLCACCHGGLVNDGREIFT 431
T ++ AC V +G+++ +
Sbjct: 321 FTLVGVINACSDLCAVVEGKQMHS 344
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 49/107 (45%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L + K++HA + K + + L +Y L ++F + P R
Sbjct: 427 VLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRD 486
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V WN++I + N A LF+ +L +KPD T+ + ACS
Sbjct: 487 VISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACS 533
>gi|449443327|ref|XP_004139431.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
gi|449521082|ref|XP_004167560.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Cucumis sativus]
Length = 583
Score = 299 bits (765), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 176/552 (31%), Positives = 291/552 (52%), Gaps = 10/552 (1%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
FNL +++L+ K ++L +++HA + + L+ D F +K++ +A N + D
Sbjct: 2 FNLKWVLLDSIKDCKNLRIFRQIHAQLVTSGLVYDDFVTSKVMEFFA--NFVEYGDYACD 59
Query: 63 KTPQRSV----FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
Q + F +NS+I Y A S+++ ++R PD FT+ + +ACS S
Sbjct: 60 YLEQGNTRLGSFPFNSLINGYVGGEFPQMAVSVYRRMVRDGFVPDMFTFPVLLKACSNFS 119
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
R VHG + GL D ++L+ Y A KVFD + D+V NS+IS
Sbjct: 120 GSREGRQVHGVVVKLGLLADHYVQNSLIRCYGACGDFSCAGKVFDEMLVRDVVSWNSLIS 179
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
GF G +D+++ +F R+ P TLV +++ L G+GIHG ++ F
Sbjct: 180 GFMKAGHFDEAISVF---FRMDVEPSMTTLVSVLAACARNGDLCTGKGIHGV-IERRFKV 235
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+ + ++ MY + C A ++F+ L D+V+W+ +ITG Q ++L F +
Sbjct: 236 NLVLGNAMLDMYVKNGCFYEAKNIFDELPTRDIVSWTIMITGLVQSDHPKQSLELFSMMR 295
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
G D +++ SVL+A A + G +H Y+ Q G + + + +A+VDMY+KCG +
Sbjct: 296 TLGISPDAIILTSVLSACASLGTLDFGTWVHEYINQRGIKWDIHIGTAIVDMYAKCGCIE 355
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+ +++F +MS+RN T+N+++ GL +HG ++A F +I G+ P+E TF A+L ACC
Sbjct: 356 MALKIFYSMSQRNTFTWNALLCGLAMHGLVHEALNLFEVMIISGVKPNEITFLAILTACC 415
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H GLV++GR+ F M++ Y + K EHY M+ L AG LEEA ++P D +
Sbjct: 416 HCGLVDEGRKYFDNMSKLYNLLPKLEHYGCMIDLFCRAGLLEEAVELARTMPMKPDVLIW 475
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
G LL+ C GN +L+ + + E D V+LSN A + RW +V +LR + D
Sbjct: 476 GLLLNACTTVGNIELSHRIQDYILELDHDDSGVFVLLSNISAINQRWSNVTRLRRLMKDR 535
Query: 539 GLRKEAGVSWVS 550
G+RK G S +
Sbjct: 536 GVRKAPGSSVIE 547
>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
Length = 1106
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 275/528 (52%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H + ++ + + A L+ +Y L A+ +F+ T R V WNS+I +A
Sbjct: 451 KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQH 510
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A LF+ + +L+PDN T+A + C L + +HG SGL D
Sbjct: 511 GSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLG 570
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y + + +A VF + D++ +MI G A G K+++LF M G
Sbjct: 571 NALINMYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFR 630
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P + T ++ + L G+ + + L S ++ V + L+S Y++ M A V
Sbjct: 631 PVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREV 690
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D+V+W+ +I GY+Q G A+ + ++ Q + S+L A + + +
Sbjct: 691 FDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSAL 750
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H +++ + V V +AL+ MY+KCG G +VF+ + E+N++T+N++I
Sbjct: 751 EEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAY 810
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A FF + ++G+ PD STF+++L AC H GLV +G +IF+ M EYG+
Sbjct: 811 AQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLEGYQIFSSMESEYGVLPT 870
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V LLG A +EA + I +P P D AV LL C I+GN LAE A+
Sbjct: 871 IEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHAANNAL 930
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ + R A ++LSN YA GRWDDV K+R + G+RKE G SW+
Sbjct: 931 KLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 978
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 123/427 (28%), Positives = 218/427 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + ++L K +H+ +++ D L+ +YA LP AR LF P+R
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+II YA +A L+K + +KP T+ + AC+ +S + +H
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SG+ + ++AL+ Y + + EA VF+G D++ NSMI+G A G ++
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +LF M PD T ++SG P L +G+ IHG +S + + L++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY RC + A +VF+SL H D+++W+A+I G + QG+ KA+ F ++ +G +
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKST 635
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+S+L SA + G + Y++ G+EL V +AL+ YSK G + +VF+ M
Sbjct: 636 FSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMP 695
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+I+++N +I G +G A EF + E+ + P++ +F +LL AC + +G+
Sbjct: 696 SRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKR 755
Query: 429 IFTRMTE 435
+ + +
Sbjct: 756 VHAEIVK 762
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 231/461 (50%), Gaps = 1/461 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S L K++H+ + KA RDP L+ +Y LP AR +F R
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRD 193
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +N+++ YA + LF + + PD TY + A + S L + +H
Sbjct: 194 VVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GL D +ALVT + +D A + F G +D D+V+ N++I+ A G +
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVE 313
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ + + M G + T + +++ L G+ IH + S + + L+S
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYARC + A +F ++ DL++W+A+I GY+++ D G+A+ ++++ +G K V
Sbjct: 374 MYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVT 433
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+L+A A S+ G +IH +++ G + + +++AL++MY +CG L VFE
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ 493
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R++I++NS+I G HG A++ F+++ + L PD TF+++L C + + G++
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ 553
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
I R+TE G+Q ++ + G+L++A + SL
Sbjct: 554 IHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 118/411 (28%), Positives = 202/411 (49%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +HA + +A + D F + L+ +Y + A +F + P+R V WNS+I
Sbjct: 43 LPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISC 102
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
YA A LF+ + P+ TY I AC ++L + +H I +G RD
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L++ Y K + A +VF G+S D+V N+M+ +A + + L LF M
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G +PD+ T + L+ PS+L G+ IH ++ +S V + LV+M RC ++S
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDS 282
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A F D+V ++ALI +Q G +A + ++ G + S+L A +
Sbjct: 283 AKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACST 342
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S + G +IH ++ + G V + +AL+ MY++CG L ++F TM +R++I++N++
Sbjct: 343 SKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAI 402
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
I G +A ++ + +G+ P TF LL AC + DG+ I
Sbjct: 403 IAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMI 453
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 191/376 (50%), Gaps = 4/376 (1%)
Query: 99 QLKP---DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
Q +P + TY + + C+ LP + +H + + +G D S+ L+ Y K +
Sbjct: 19 QPRPTETERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSV 78
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A +VF + D++ NS+IS +A GF K+ QLF+ M G P++ T + +++
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ P+ L G+ IH +K+ + V + L+SMY +C + A VF + D+V+++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
++ Y+Q+ + L F +++ +G D V ++L A + + G IH ++
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G + V +ALV M +CG + Q F+ ++R+++ YN++I L HG +AFE +
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
+ G+ + +T+ ++L AC + G+ I + ++E+ G + + ++ +
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYAR 377
Query: 456 AGNLEEAYSFIWSLPK 471
G+L +A +++PK
Sbjct: 378 CGDLPKARELFYTMPK 393
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 155/325 (47%), Gaps = 5/325 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL K+ ++L K++H + ++ L D L+ +Y L AR +F R
Sbjct: 538 VLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRD 597
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I A A LF + +P T++ I + C+ ++ L + V
Sbjct: 598 VMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIA 657
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SG D+ +AL++AYSK + +A +VFD + D+V N +I+G+A G
Sbjct: 658 YILNSGYELDTGVGNALISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQT 717
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++ M P++++ V L++ S L G+ +H +K V + L+S
Sbjct: 718 AVEFAYQMQEQDVVPNKFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALIS 777
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C A VF+++ ++VTW+A+I Y+Q G KAL +F + +G K D
Sbjct: 778 MYAKCGSQGEAQEVFDNIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGST 837
Query: 309 IASVLAAAAKSANVWPGAVIHGYVI 333
S+L+A + G V+ GY I
Sbjct: 838 FTSILSACNHA-----GLVLEGYQI 857
>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 181/567 (31%), Positives = 296/567 (52%), Gaps = 39/567 (6%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS---ARILFDKTPQRSVFLWNSIIR 77
+ K++HA + + L DPF A++L+ AL+ PS A+ +FD+ P +++ WN++IR
Sbjct: 50 QLKQIHAQMLRTGLFFDPFSASRLITAAALSP-FPSLDYAQQVFDQIPHPNLYTWNTLIR 108
Query: 78 AYALAHRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
AYA + + + +F +L PD FT+ + +A SE +L + HG I LG
Sbjct: 109 AYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLG 168
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D ++L+ Y+K + +VF + D+V NSMI+ F G +++L+LF M
Sbjct: 169 SDVFILNSLIHFYAKCGELGLGYRVFVNIPRRDVVSWNSMITAFVQGGCPEEALELFQEM 228
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
P+ T+VG++S + S G+ +H + ++ +S+ ++ MY +C +
Sbjct: 229 ETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESLTLSNAMLDMYTKCGSV 288
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDY----------------------------- 287
A +F+ + D+V+W+ ++ GY++ G+Y
Sbjct: 289 EDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCG 348
Query: 288 --GKALYYFRKLNM-QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
+AL F +L + + K D V + S L+A A+ + G IH Y+ + G +L+ ++
Sbjct: 349 KPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLT 408
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
++L+DMY KCG L + VF ++ +++ ++++I GL +HG A F + E +
Sbjct: 409 TSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVK 468
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
P+ TF+ +LCAC H GLV +GR F +M YG+ +HY MV +LG AG LEEA
Sbjct: 469 PNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYACMVDILGRAGLLEEAVE 528
Query: 465 FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP-RKGAYKVMLSNTYAEDG 523
I +P +V GALL C I+ N LAE QL E +P GAY V+LSN YA+ G
Sbjct: 529 LIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPGNHGAY-VLLSNIYAKAG 587
Query: 524 RWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+WD V LR + D GL+KE G S +
Sbjct: 588 KWDRVSGLRKLMRDVGLKKEPGCSSIE 614
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 175/398 (43%), Gaps = 34/398 (8%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F FL+ S+ + L K H +V K L D F L+ YA L +F
Sbjct: 137 FTFPFLIKAASEL-EELFTGKAFHGMVIKVLLGSDVFILNSLIHFYAKCGELGLGYRVFV 195
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
P+R V WNS+I A+ +A LF+ + +KP+ T + AC++ SD
Sbjct: 196 NIPRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEF 255
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R+VH + +G S+A++ Y+K +++A ++FD + + D+V +M+ G+A
Sbjct: 256 GRWVHSYIERNRIGESLTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAK 315
Query: 183 CGFWDKSLQLFDWM------------------------------LRLGKT--PDEYTLVG 210
G +D + +FD M L+L KT PDE TLV
Sbjct: 316 IGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVS 375
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
+S + + +G IH + K ++++ L+ MY +C + A VF+S+ D
Sbjct: 376 TLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKD 435
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
+ WSA+I G + G A+ F K+ K + V ++L A + V G
Sbjct: 436 VFVWSAMIAGLAMHGHGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFN 495
Query: 331 YV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ + +G V + +VD+ + G L +++ E M
Sbjct: 496 QMELVYGVLPGVKHYACMVDILGRAGLLEEAVELIEKM 533
>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
Length = 726
Score = 298 bits (764), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 171/573 (29%), Positives = 296/573 (51%), Gaps = 38/573 (6%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWN 73
S + ++ +LH+L+ L ++ KL+ YA + S + +P +V+LWN
Sbjct: 25 SAATTTQLHKLHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWN 84
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
SIIRA F++A SL+ R +L+PD +T+ + AC+ D + +H +
Sbjct: 85 SIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDM 144
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G G D +AL+ Y + + +D+A KVF+ + D+V NS+ISG+ G+W+++L+++
Sbjct: 145 GFGSDLYIGNALIDMYCRFNDLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIY 204
Query: 194 DWMLRLGK------TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++L PD T+ ++ L G+ +H + + S ++ S++L+
Sbjct: 205 YQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILI 264
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR------------ 295
+MYA+C + ++ VF+ + D V+W+++I Y Q G G +L F
Sbjct: 265 NMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNT 324
Query: 296 -------------------KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
++ +G D + S+L + A G IHG + + G
Sbjct: 325 IIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLG 384
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
E V V + L++MYSKCG L QVF+ M ++++T+ ++I G++G +A F
Sbjct: 385 LESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFG 444
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
++ G+ PD F A++ AC H GLV +G F RM ++Y I+ + EHY +V LL +
Sbjct: 445 EMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRS 504
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
L++A FI S+P D ++ GALLS C + G++++AE V+ ++ E +P Y V++S
Sbjct: 505 ALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERIIELNPDDTGYYVLVS 564
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N YA G+WD V +R I GL+K+ G SW+
Sbjct: 565 NIYAALGKWDQVRSIRKSIKARGLKKDPGCSWM 597
>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
Group]
gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
Length = 658
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 274/509 (53%), Gaps = 5/509 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ YA +N + A ++FD+ PQR + WNSII A ++ A LF + + D
Sbjct: 25 LISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGLYDKAVELFVRMWLEGQELD 84
Query: 104 NFTYACITRAC--SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
+ T + AC S S + G+ VHG ++ +GL ++ +AL+ YS S K+
Sbjct: 85 STTLLSVMPACVQSHYSFIGGV--VHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKI 142
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
F + ++V +MI+ + G +DK LF M G PD + + + L
Sbjct: 143 FRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESL 202
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
G+ +HG+ +++ + V++ L+ MY +C M A +F+ + D ++W+ LI GY
Sbjct: 203 KHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGY 262
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
S+ +A F ++ +Q + + V +A +L AAA +++ G +H Y ++ G+
Sbjct: 263 SRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLERGREMHAYAVRRGYLEDN 321
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V++ALVDMY KCG L L ++F+ ++ +N+I++ +I G G+HG A F +
Sbjct: 322 FVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGS 381
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
G+ PD +FSA+L AC H GL ++G F M E+ I+ K +HY MV LL GNL+E
Sbjct: 382 GIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKE 441
Query: 462 AYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAE 521
AY FI ++P D ++ +LL C I+ N LAE VA +FE +P Y V+L+N YAE
Sbjct: 442 AYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAEKVAEMVFELEPENTGYYVLLANIYAE 501
Query: 522 DGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
RW+ V KL++ + GLR+ G SW+
Sbjct: 502 AERWEAVRKLKNKVGGRGLRENTGCSWIE 530
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 171/304 (56%), Gaps = 1/304 (0%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG + G G +AL++ Y+K + I++A+ VFD + D++ NS+I G A G
Sbjct: 6 VHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEMPQRDIISWNSIIGGCASNGL 65
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+DK+++LF M G+ D TL+ ++ + +G +HG+ +++ S + +
Sbjct: 66 YDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETSLGNA 125
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MY+ C+ S +F ++ ++V+W+A+IT Y++ G + K F+++ ++G + D
Sbjct: 126 LLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLEGIRPD 185
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
I S L A A + ++ G +HGY I++G E + V++AL++MY KCGY+ +F+
Sbjct: 186 VFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFD 245
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+++++ I++N++I G +AF F +++ + L P+ T + +L A +
Sbjct: 246 HVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAASLSSLER 304
Query: 426 GREI 429
GRE+
Sbjct: 305 GREM 308
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 181/392 (46%), Gaps = 5/392 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + L+ + L+ +Y+ + S +F Q++V W ++I +Y A
Sbjct: 107 VHGYSVRTGLISETSLGNALLDMYSNCSDWRSTNKIFRNMEQKNVVSWTAMITSYTRAGH 166
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F+ LF+ + ++PD F A + N L + VHG AI +G+ ++A
Sbjct: 167 FDKVAGLFQEMGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANA 226
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K ++EA +FD V+ D + N++I G++ +++ LF+ ML L P+
Sbjct: 227 LMEMYVKCGYMEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPN 285
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+ ++ S L G+ +H + ++ + ++V++ LV MY +C + A +F+
Sbjct: 286 AVTMACILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFD 345
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L + +L++W+ +I GY G A+ F ++ G + D +++L A + S
Sbjct: 346 MLTNKNLISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDE 405
Query: 325 G-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGL 382
G + +H E + + +VD+ G L + ETM E + + S++ G
Sbjct: 406 GWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGC 465
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+H A + + E L P+ + + LL
Sbjct: 466 RIHRNVKLAEKVAEMVFE--LEPENTGYYVLL 495
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 11/271 (4%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
++SL K +H + + A L+ +Y + AR +FD ++ WN++
Sbjct: 199 NESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGYMEEARFIFDHVTKKDTISWNTL 258
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I Y+ ++ N+A +LF +L QL+P+ T ACI A + S L R +H A+ G
Sbjct: 259 IGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPAAASLSSLERGREMHAYAVRRGY 317
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D+ ++ALV Y K + A ++FD +++ +L+ MI+G+ G ++ LF+
Sbjct: 318 LEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISWTIMIAGYGMHGRGRDAIALFEQ 377
Query: 196 MLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
M G PD + ++ SGL + + ++ Y + +V +
Sbjct: 378 MKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHY----ACMVDLL 433
Query: 251 ARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
+ AY ++ PD W +L+ G
Sbjct: 434 CHTGNLKEAYEFIETMPIEPDSSIWVSLLRG 464
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S SL R +E+HA + L D F A LV +Y L AR LFD ++
Sbjct: 292 ILPAAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKN 351
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
+ W +I Y + R DA +LF+ + + ++PD +++ I ACS + GLR
Sbjct: 352 LISWTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHS----GLR 403
>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
Length = 980
Score = 298 bits (763), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 278/534 (52%), Gaps = 1/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L + K +HA + + L + + T L+ +Y + A +F+ R+V W ++I
Sbjct: 320 EALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMI 379
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+A R +A F ++ + ++P+ T+ I ACS S L R +H I +G
Sbjct: 380 AGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYI 439
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +AL++ Y+K + +A VF+ +S ++V N+MI+ + +D ++ F +
Sbjct: 440 TDDRVRTALLSMYAKCGSLMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQAL 499
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
L+ G PD T +++ P L +G+ + +++ F+S ++ + LVSM+ C +
Sbjct: 500 LKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDL 559
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA ++FN + DLV+W+ +I G+ Q G+ A YF+ + G K D + +L A
Sbjct: 560 MSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNAC 619
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H + + + V+V + L+ MY+KCG + VF + ++N+ ++
Sbjct: 620 ASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPKKNVYSWT 679
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I G HG +A E F + ++G+ PD TF L AC H GL+ +G F M ++
Sbjct: 680 SMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGALSACAHAGLIKEGLHHFESM-KD 738
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+ I+ + EHY MV L G AG L EA FI + D + GALL C ++ + +LAE
Sbjct: 739 FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKPDSRLWGALLGACQVHLDVELAEK 798
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
VA + E DP V+LSN YA G W +V K+R ++D G+ K+ G SW+
Sbjct: 799 VAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRKVMLDRGVVKKPGQSWIE 852
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/455 (27%), Positives = 233/455 (51%), Gaps = 1/455 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++ + EL +L+ A D F T L+ ++ + A +F+ P+R + W S+I
Sbjct: 219 KNVDKGGELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMI 278
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A +F A +LF+ + ++PD + + +AC+ L + VH GL
Sbjct: 279 TGLARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLD 338
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ +AL++ Y+K +++A++VF+ V ++V +MI+GFA G +++ F+ M
Sbjct: 339 TEIYVGTALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKM 398
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+ T + ++ PS L G+ IH +K+ + + D V + L+SMYA+C +
Sbjct: 399 IESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSL 458
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +VF + ++V W+A+IT Y Q Y A+ F+ L +G K D S+L
Sbjct: 459 MDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVC 518
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ G + +I+ GFE + + +ALV M+ CG L + +F M ER+++++N
Sbjct: 519 KSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWN 578
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I G HG AF++F+ + E G+ PD+ TF+ LL AC + +GR + +TE
Sbjct: 579 TIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEA 638
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ ++ + G++++A+ +LPK
Sbjct: 639 -ALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLPK 672
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 216/414 (52%), Gaps = 10/414 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L H++L + +H + + + D F L+ +YA SA+ +FD+ P +
Sbjct: 110 LLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKD 169
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V+ WN ++ Y R+ +A L + +++ +KPD +T+ + AC++ ++ G
Sbjct: 170 VYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVD-----KG 224
Query: 129 GAIVS-----GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
G + S G D +AL+ + K +D+A+KVF+ + DL+ SMI+G A
Sbjct: 225 GELFSLILNAGWDTDLFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARH 284
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+ ++ LF M G PD+ V L+ P L G+ +H + D+ YV
Sbjct: 285 RQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVG 344
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+SMY +C M A VFN + ++V+W+A+I G++Q G +A +F K+ G +
Sbjct: 345 TALLSMYTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIE 404
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ V S+L A ++ + + G IH +I+ G+ V +AL+ MY+KCG L V
Sbjct: 405 PNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNV 464
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
FE +S++N++ +N++I H A F+ ++++G+ PD STF+++L C
Sbjct: 465 FERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVC 518
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 190/365 (52%), Gaps = 6/365 (1%)
Query: 77 RAYALAHRFNDAKSLFKNLL------RTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
RA A +R + A L + +L ++ TY+ + + C ++ +L +H
Sbjct: 71 RANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERIHNHI 130
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
S + D + L++ Y+K + A ++FD + D D+ N ++ G+ ++++
Sbjct: 131 KFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRYEEAF 190
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+L + M++ G PD+YT V +++ + + G + L + +D+ +V + L++M+
Sbjct: 191 RLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGTALINMH 250
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+C ++ A VFN+L DL+TW+++ITG ++ + +A F+ + +G + D V
Sbjct: 251 IKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQPDKVAFV 310
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A + G +H + + G + + V +AL+ MY+KCG + ++VF + R
Sbjct: 311 SLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSMYTKCGSMEDALEVFNLVKGR 370
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
N++++ ++I G HG +AF FF +IE G+ P+ TF ++L AC + GR+I
Sbjct: 371 NVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIH 430
Query: 431 TRMTE 435
R+ +
Sbjct: 431 DRIIK 435
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 127/244 (52%), Gaps = 5/244 (2%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L G+ IH S ++ ++L+SMYA+C NSA +F+ + D+ +W+ L+ G
Sbjct: 120 LGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGG 179
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y Q Y +A ++ G K D +L A A + NV G + ++ G++
Sbjct: 180 YVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTD 239
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ V +AL++M+ KCG + ++VF + R++IT+ S+I GL H QA F+ + E
Sbjct: 240 LFVGTALINMHIKCGGVDDALKVFNNLPRRDLITWTSMITGLARHRQFKQACNLFQVMEE 299
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGN 458
+G+ PD+ F +LL AC H + G+ + RM E + TE Y+ ++ + G+
Sbjct: 300 EGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKE---VGLDTEIYVGTALLSMYTKCGS 356
Query: 459 LEEA 462
+E+A
Sbjct: 357 MEDA 360
>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
mitochondrial-like [Vitis vinifera]
Length = 735
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 175/524 (33%), Positives = 288/524 (54%), Gaps = 12/524 (2%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDK-TPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
R A ++R NN P+ LF+K + +VF WNS+I A + +A F +
Sbjct: 85 RRSICAGAVLRRRYSNN--PNLTTLFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSS 142
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+ + LKP+ T+ C ++CS DL R H A++ G D SSALV YSK
Sbjct: 143 MRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGE 202
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF-DWMLRLGKTP-------DEY 206
+ +A +FD +S ++V SMI+G+ ++L LF ++++ + D
Sbjct: 203 LRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPI 262
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
+V ++S S S+ +G+HGF +K F+ V + L+ YA+C + + VF+ +
Sbjct: 263 AMVSVLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGM 322
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSANVWPG 325
D+++W+++I Y+Q G +++ F ++ G+ + V +++VL A A S + G
Sbjct: 323 AERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLG 382
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
IH VI+ G E +V V ++++DMY KCG + + + F+ M E+N+ ++++++ G G+H
Sbjct: 383 KCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMH 442
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEH 445
G +A E F ++ G+ P+ TF ++L AC H GL+ +G F M+ E+ ++ EH
Sbjct: 443 GHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH 502
Query: 446 YIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEND 505
Y MV LLG AG L+EA+ I + D V GALL C ++ N DL EI A +LFE D
Sbjct: 503 YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELD 562
Query: 506 PRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
P+ Y V+LSN YA+ GRW+DV ++R + ++GL K G S V
Sbjct: 563 PKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGFSLV 606
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 135/314 (42%), Gaps = 17/314 (5%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S T+ +H + K D L+ YA L +R +FD +R V WNSII Y
Sbjct: 278 SITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVY 337
Query: 80 ALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
A ++ +F +++ ++ + T + + AC+ + + +H I GL +
Sbjct: 338 AQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESN 397
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++++ Y K ++ A K FD + + ++ ++M++G+ G ++L++F M
Sbjct: 398 VFVGTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNM 457
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSFDSYDYVS--SVLVSMYARCNC 255
G P+ T V +++ LL +G H F + FD V +V + R
Sbjct: 458 AGVKPNYITFVSVLAACSHAGLLE--EGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGY 515
Query: 256 MNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP------VL 308
+ A+ + + PD V W AL+ + RKL + DP VL
Sbjct: 516 LKEAFDLIKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLF----ELDPKNCGYYVL 571
Query: 309 IASVLAAAAKSANV 322
++++ A A + +V
Sbjct: 572 LSNIYADAGRWEDV 585
>gi|147765322|emb|CAN64903.1| hypothetical protein VITISV_019802 [Vitis vinifera]
Length = 625
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 304/556 (54%), Gaps = 20/556 (3%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L S +H+SL T++ H+ + L ++ F ATKL+ YA+ +R++FD ++V
Sbjct: 30 LHFSVTHKSLKLTRQSHSRILSLGLSQNSFLATKLIFAYAICQHPYHSRLVFDSLQHKNV 89
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
FLWNS+I +N+A LF + + + PD+FT + +++ SE L + +HG
Sbjct: 90 FLWNSLINGCVKNRLYNEAFQLFNQMCSSDVLPDDFTLSTLSKVSSELGALFSGKSIHGK 149
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA---HCGFW 186
+I +G D++ ++++++ Y K DE+ KVFD ++ + N +I+G+A +C F
Sbjct: 150 SIRTGFVSDTVVANSIMSMYCKCGNFDESRKVFDEMTIRNSGSWNVLIAGYAVSGNCNFR 209
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLIS------GLWEPSLLSVGQGIHGFCLKSSF---- 236
+++ + M PD YT+ L+ G W+ G+ +H + +K+
Sbjct: 210 EETWEFVKQMQMDEVRPDAYTISSLLPLCDGDMGKWD-----YGRELHCYIVKNELVLGL 264
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
DS ++ L+ MY+R N + VF+ + ++ +W+A+I GY + GD +AL FR
Sbjct: 265 DSDVHLGCCLIDMYSRSNKVVVGRRVFDRMKCRNVFSWTAMINGYVENGDSDEALSLFRD 324
Query: 297 LN-MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + G + + V + SVL A + + + G IHG+ ++ V + +AL+DMYSKCG
Sbjct: 325 MQVIDGVEPNRVSLVSVLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCG 384
Query: 356 YLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
L +VFE S ++ I+++S+I G GLHG +A + +++ G+ PD T +L
Sbjct: 385 SLDSARRVFEDDSLCKDAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGIL 444
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC GLVN+G I++ + +YGI+ E +V +LG AG L+ A FI ++P
Sbjct: 445 SACGRSGLVNEGLNIYSSVINDYGIEPTLEICACIVDMLGRAGQLDRALDFIKAIPVEPG 504
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
P+V GAL+SC I+G+ ++ E+ L + +P+ + V +SN YA RWD V ++R
Sbjct: 505 PSVWGALVSCSIIHGDLEMQELAYRFLIQLEPKNPSNYVSISNLYASSRRWDAVAEVRRM 564
Query: 535 IVDNGLRKEAGVSWVS 550
+ D LRK G SW+S
Sbjct: 565 MKDKRLRKVPGCSWIS 580
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF-DKTPQR 67
VL S L +++H + L + L+ +Y+ L SAR +F D + +
Sbjct: 341 VLPACSSFSGLLSGRQIHGFAVRKELNNEVSLCNALIDMYSKCGSLDSARRVFEDDSLCK 400
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
W+S+I Y L + +A L+ +L+ ++PD T I AC
Sbjct: 401 DAISWSSMISGYGLHGKGQEAILLYDKMLQAGIRPDMITTVGILSAC 447
>gi|15227623|ref|NP_178437.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216181|sp|Q9ZQ74.1|PP146_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g03380, mitochondrial; Flags: Precursor
gi|4335760|gb|AAD17437.1| unknown protein [Arabidopsis thaliana]
gi|330250600|gb|AEC05694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 298 bits (762), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 174/533 (32%), Positives = 286/533 (53%), Gaps = 4/533 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q L K++H + K D T L+ +YA + SA +F+ R+V W S+I
Sbjct: 156 QDLDNGKKIHCQLVKVPSF-DNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMI 214
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y + LF + + + +TY + AC++ S L ++ HG + SG+
Sbjct: 215 AGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIE 274
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S ++L+ Y K I A +VF+ S DLV+ +MI G+ H G +++L LF M
Sbjct: 275 LSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKM 334
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ P+ T+ ++SG L +G+ +HG +K + V++ LV MYA+C
Sbjct: 335 KGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQN 393
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +VF D+V W+++I+G+SQ G +AL+ F ++N + + V +AS+ +A
Sbjct: 394 RDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
Query: 317 AKSANVWPGAVIHGYVIQHGF--ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A ++ G+ +H Y ++ GF SV V +AL+D Y+KCG +F+T+ E+N IT
Sbjct: 454 ASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTIT 513
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++++I G G G T + E F ++++K P+ESTF+++L AC H G+VN+G++ F+ M
Sbjct: 514 WSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMY 573
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++Y T+HY MV +L AG LE+A I +P D GA L C ++ DL
Sbjct: 574 KDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLG 633
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
EIV ++ + P +Y V++SN YA DGRW+ ++R+ + GL K AG S
Sbjct: 634 EIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHS 686
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 208/411 (50%), Gaps = 5/411 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
FL+L + SL ++ H ++ L+ D ATKLV LY AR++FD+ P+
Sbjct: 48 FLLLSKCTNIDSLRQS---HGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPE 104
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+LW ++R Y L + L+ L++ + D+ ++ +AC+E DL + +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKI 164
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H +V D++ + L+ Y+K I A KVF+ ++ ++V SMI+G+
Sbjct: 165 H-CQLVKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ L LF+ M +EYT LI + S L G+ HG +KS + + + L
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY +C +++A VFN H DLV W+A+I GY+ G +AL F+K+ K +
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V IASVL+ N+ G +HG I+ G V++ALV MY+KC VFE
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRDAKYVFEM 402
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
SE++I+ +NS+I G +G ++A F + + + P+ T ++L AC
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSAC 453
>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 895
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 284/535 (53%), Gaps = 5/535 (0%)
Query: 18 SLSRTKE---LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
SL KE +H ++ K + D L+ +Y L AR +F K + WN+
Sbjct: 234 SLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNT 293
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I YA R + LF +++ PD + RAC ++ DL +FVH I SG
Sbjct: 294 MICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D++ + L+ Y+K + A +VFD D V NS+I+G+ G++ + L+ F
Sbjct: 353 FECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK 412
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M+++ + PD T V L+S + + ++ G+GIH +K F++ + + L+ +YA+C
Sbjct: 413 -MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG 471
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
M+ VF+ + D+++W+ +I D ++ +G D + +L
Sbjct: 472 EMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILP 531
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+ A G IHGY+ + GFE +V + +AL++MYSKCG L I+VF+ M E++++T
Sbjct: 532 MCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT 591
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ ++I G++G +A + F+D+ G+ PD F A + AC H G+V +G F RM
Sbjct: 592 WTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMK 651
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+Y ++ + EHY +V LL +G L +A FI S+P D ++ GALLS C GN+++A
Sbjct: 652 TDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIA 711
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ V+ ++ E + Y V++SN YA G+WD V +R+ + GL+KE G SW+
Sbjct: 712 QRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWI 766
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 223/443 (50%), Gaps = 11/443 (2%)
Query: 6 HFLVLELSKSHQSLSRTKEL---HALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILF 61
FL L K+ S T +L H+L+ + L ++ KL+ YA + + + S +
Sbjct: 19 EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
+P +V+LWNSIIRA F A + + +L+PD FT+ + +C+ DL
Sbjct: 79 SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
VH A+ G D +AL+ YS+ +D A VF+ +S+ D V NS+ISG+
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG--IHGFCLKSSFDSY 239
GFW+ +L ++ G PD +T+ ++ L SL++V +G +HG K
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVL--LACGSLMAVKEGVAVHGVIEKIGIAGD 256
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ + L+SMY + + A VF+ + D VTW+ +I GY+Q G + ++ F + +
Sbjct: 257 VIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-I 315
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G D + I S + A +S ++ G +H Y+I GFE + + L+DMY+KCG L
Sbjct: 316 DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLA 375
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+VF+T ++ +T+NS+I G G+ + E F+ +++ PD TF LL
Sbjct: 376 AQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQ 434
Query: 420 GGLVNDGREIFTRMTEEYGIQAK 442
+N GR I + ++G +A+
Sbjct: 435 LADINQGRGIHCDVI-KFGFEAE 456
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 2/335 (0%)
Query: 94 NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
N T F + + + S + P LR VH I SGL I S L++ Y+++
Sbjct: 9 NFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVK 68
Query: 154 LIDEAIKVFDGVSDPDLV-LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
++ VF +S + V L NS+I H G + ++L + M PD +T +I
Sbjct: 69 DPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVI 128
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+ L +G +H ++ F+S Y+ + L+ MY+R +++A +VF + + D V
Sbjct: 129 NSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSV 188
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W++LI+GY G + AL + K M G D ++SVL A V G +HG +
Sbjct: 189 SWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+ G V++ + L+ MY K L +VF M+ ++ +T+N++I G G +
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASV 308
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ F D+I+ G PD + ++ + AC G + G+
Sbjct: 309 KLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGK 342
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 16/299 (5%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+L + +++ + +H V K + L+ +YA + +F
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFK--NLLRTQ-LKPDNFTYACITRACSENSDLPGLR 124
+ WN++I A + F+D F+ N +RT+ L PD T I CS + +
Sbjct: 487 DIISWNTVI---ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG SG + +AL+ YSK ++ IKVF + + D+V ++IS F G
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYG 603
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSY 239
K+L+ F M G PD + I SG+ + L + + L+ + Y
Sbjct: 604 EGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHY 663
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ +V + AR + A S+ PD W AL++ +G+ A +K+
Sbjct: 664 ----ACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKI 718
>gi|359490408|ref|XP_002267761.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 178/573 (31%), Positives = 299/573 (52%), Gaps = 40/573 (6%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQRSV 69
+SK+ S +KELHA + + L DPF + ++R Y+L++ L A ++F++ ++
Sbjct: 22 RVSKNSISTDTSKELHAHLIRTQLHTDPFLMSDVIRSYSLSSTNLHKAHLVFNQIECPTL 81
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
+WN +IR + + +A ++ + + +N T + +AC+ SD+ R +H
Sbjct: 82 VVWNHMIRGLSQSDHPVEAIHMYTRMHHQGITGNNLTLIFLFKACARVSDIVSGRKIHVH 141
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
A+ G S+AL+ Y+ + A K+FDG+ D DLV N++I G++ + +
Sbjct: 142 ALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNKYKEV 201
Query: 190 LQLFDWMLRLGKTPDEYTLVGLI-----SGLWE--------------------------- 217
L+LFD M D T+V +I G WE
Sbjct: 202 LRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDVYLGNTLIDM 261
Query: 218 ---PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
SL + QG+ + + S++ LV +A+ + +A +F+++ D+++W
Sbjct: 262 YGRRSLAELAQGVFDRMRERNIVSWN----ALVMGHAKVGNLTAARKLFDNMPKRDVISW 317
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+++ITGYSQ + A+ F+++ K D V +ASVL+A A + G +H Y+ +
Sbjct: 318 TSMITGYSQASQFSDAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRR 377
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
HG + + V ++L+DMY KCG + ++VF M +++ +++ SVI GL ++GF A +
Sbjct: 378 HGVQADIYVGNSLIDMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDL 437
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F ++ +G+ P TF +L AC H GLVN G E F M +G+ +HY +V LL
Sbjct: 438 FSQMLREGVQPTHGTFVGILLACAHAGLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLS 497
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
+GN+++AY FI +P D V LLS C ++GN LAEI +L E DP V+
Sbjct: 498 RSGNIDKAYEFIKKMPIVPDVVVWRILLSACKLHGNVVLAEIATKRLLELDPCDSGNYVL 557
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
LSNTYA RWDD MK+R+ + D+ ++K +G S
Sbjct: 558 LSNTYAGVDRWDDAMKMRELMEDSDVQKPSGSS 590
>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Brachypodium distachyon]
Length = 796
Score = 297 bits (761), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 282/528 (53%), Gaps = 4/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LHAL + D F A+ L +LY + AR +FD P LWN+++ + +
Sbjct: 143 RPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNTLLAGLSGS 202
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++ + ++PD+ T A + A +E ++ R VH GL +
Sbjct: 203 EAL---EAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L++ Y+K ++ A +FD + PDLV N++ISG++ G S++LF ++ +G
Sbjct: 260 TGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMGLR 319
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TLV LI + +H +K+ D+ VS+ L ++Y R N M+SA
Sbjct: 320 PSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRA 379
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+++ + +W+A+I+GY+Q G A+ F+++ + +P+ I+S L+A A+ +
Sbjct: 380 FDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGAL 439
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + EL+V V +AL+DMY KCG + +F++M +N++++N +I G
Sbjct: 440 SLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGY 499
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
GLHG +A + ++D+++ L+P STF ++L AC HGGLV +G +F MT +YGI
Sbjct: 500 GLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPG 559
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPK-PVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EH MV LLG AG L+EA+ I PK V P + GALL C ++ + DLA++ + +L
Sbjct: 560 IEHCTCMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKL 619
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
FE +P Y V+LSN Y ++ + +R + L K G + +
Sbjct: 620 FELEPENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLI 667
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 122/459 (26%), Positives = 217/459 (47%), Gaps = 47/459 (10%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
L + L+ H +L L+ ASL P + +L R + P
Sbjct: 42 QLLAVSLASGHYTLDHAPASSLLLRYASLRSPPAHLLRLYRAF----------------P 85
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYA----CITRACSENSDLP 121
+ FL NS++R+ +L +LL PD+F++A + +CS P
Sbjct: 86 RPDRFLRNSLLRSL---------PTLRADLLFPS--PDSFSFAFAATSLASSCSRGGISP 134
Query: 122 ------GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
LR +H A+ SG D+ +SAL Y LS ++A KVFD V PD VL N+
Sbjct: 135 PSAASAALRPLHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSPDTVLWNT 194
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
+++G + ++L+ F M G PD TL ++ E + ++G+ +H F K
Sbjct: 195 LLAGLS----GSEALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKC 250
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
+++V + L+S+YA+C M A H+F+ + PDLVT++ALI+GYS G G ++ F
Sbjct: 251 GLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELF 310
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
++L G + + +++ + + +H +V++ G + + VS+AL +Y +
Sbjct: 311 KELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRF 370
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ + F+ M E+ + ++N++I G +G T A F+ + + P+ T S+ L
Sbjct: 371 NDMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSAL 430
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
AC G ++ G+ + + E K E +Y++ L
Sbjct: 431 SACAQLGALSLGKWVHKIIANE-----KLELNVYVMTAL 464
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H ++A L + + T L+ +Y + AR +FD ++V WN +I
Sbjct: 438 ALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMIS 497
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
Y L + +A L+K+++ L P + T+ + ACS HGG + G
Sbjct: 498 GYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACS-----------HGGLVKEG 543
>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 902
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 274/542 (50%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L K +H+ + A D T LV++YA R +F+K R
Sbjct: 233 VLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRD 292
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I A + +A ++ + R + P+ TY + AC ++ L + +H
Sbjct: 293 LIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHS 352
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+G D +AL++ YS+ I +A VFD + D++ +MI G A GF +
Sbjct: 353 RVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAE 412
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L ++ M + G P+ T +++ P+ L G+ IH +++ + +V + LV+
Sbjct: 413 ALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVN 472
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY+ C + A VF+ + D+V ++A+I GY+ +AL F +L +G K D V
Sbjct: 473 MYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVT 532
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
++L A A S ++ IH V + GF V +ALV Y+KCG VFE M+
Sbjct: 533 YINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT 592
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+RN+I++N++I G HG A + F + +G+ PD TF +LL AC H GL+ +GR
Sbjct: 593 KRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRR 652
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M++++ I EHY MV LLG AG L+EA + I ++P + + GALL C I+
Sbjct: 653 YFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTMPFQANTRIWGALLGACRIH 712
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +AE A + D V LS+ YA G WD KLR + G+ KE G SW
Sbjct: 713 GNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSW 772
Query: 549 VS 550
+
Sbjct: 773 IQ 774
Score = 226 bits (577), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 221/422 (52%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L KS +L +E+H +A LL D A ++ +YA + AR +FDK ++SV
Sbjct: 133 LSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSV 192
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
W I YA R A +F+ + + + P+ TY + A S + L + VH
Sbjct: 193 VSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSR 252
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ +G D+ +ALV Y+K + +VF+ + + DL+ N+MI G A G+W+++
Sbjct: 253 ILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEA 312
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
++++ M R G P++ T V L++ + L G+ IH K+ F S V + L+SM
Sbjct: 313 SEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISM 372
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y+RC + A VF+ + D+++W+A+I G ++ G +AL ++++ G + + V
Sbjct: 373 YSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQEMQQAGVEPNRVTY 432
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
S+L A + A + G IH V++ G V + LV+MYS CG + QVF+ M +
Sbjct: 433 TSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQ 492
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
R+I+ YN++I G H +A + F + E+GL PD+ T+ +L AC + G + REI
Sbjct: 493 RDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREI 552
Query: 430 FT 431
T
Sbjct: 553 HT 554
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 215/442 (48%), Gaps = 3/442 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP--QRSVFLWNSIIRAYA 80
+++H + + + D + L+ +Y + AR ++ K +R+V WN+++ Y
Sbjct: 43 RQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYI 102
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A L + + + L PD T +C L R +H A+ +GL D
Sbjct: 103 QYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVK 162
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++ ++ Y+K I+EA +VFD + +V I G+A CG + + ++F M + G
Sbjct: 163 VANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEG 222
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+ T + +++ P+ L G+ +H L + +S V + LV MYA+C
Sbjct: 223 VVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCR 282
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF L + DL+ W+ +I G ++ G + +A + ++ +G + + +L A SA
Sbjct: 283 QVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSA 342
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G IH V + GF + V +AL+ MYS+CG + VF+ M +++I++ ++I
Sbjct: 343 ALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIG 402
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
GL GF +A ++++ + G+ P+ T++++L AC + GR I ++ E G+
Sbjct: 403 GLAKSGFGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEA-GLA 461
Query: 441 AKTEHYIYMVKLLGLAGNLEEA 462
+V + + G++++A
Sbjct: 462 TDAHVGNTLVNMYSMCGSVKDA 483
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/341 (29%), Positives = 174/341 (51%), Gaps = 7/341 (2%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y + + C E DL R VH I D T +AL+ Y + I+EA +V+ +S
Sbjct: 26 YMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGSIEEARQVWKKLS 85
Query: 167 DPDLVL--CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ + N+M+ G+ G+ +K+L+L M + G PD T++ +S P L G
Sbjct: 86 YMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWG 145
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ IH +++ V++ +++MYA+C + A VF+ + +V+W+ I GY+
Sbjct: 146 REIHFQAMQAGLLFDVKVANCILNMYAKCGSIEEAREVFDKMEKKSVVSWTITIGGYADC 205
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
G A F+K+ +G + + SVL A + A + G +H ++ G E V
Sbjct: 206 GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGHESDTAVG 265
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+ALV MY+KCG QVFE + R++I +N++I GL G+ +A E + + +G+
Sbjct: 266 TALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVM 325
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRM-----TEEYGIQ 440
P++ T+ LL AC + ++ G+EI +R+ T + G+Q
Sbjct: 326 PNKITYVILLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQ 366
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
L QG + + +L + ++ G +H ++IQH +AL++MY +CG
Sbjct: 14 LQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALINMYIQCGS 73
Query: 357 LGLGIQVFETMS--ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ QV++ +S ER + ++N++++G +G+ +A + R + + GL PD +T + L
Sbjct: 74 IEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFL 133
Query: 415 CACCHGGLVNDGREI-FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+C G + GREI F M K + I + + G++EEA + K
Sbjct: 134 SSCKSPGALEWGREIHFQAMQAGLLFDVKVANCI--LNMYAKCGSIEEAREVFDKMEK 189
>gi|357465513|ref|XP_003603041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492089|gb|AES73292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 729
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 171/529 (32%), Positives = 288/529 (54%), Gaps = 6/529 (1%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ + +H KA D L+ +YA + L ++++LFD+ ++SV WN++I Y
Sbjct: 175 QGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYG 234
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
F+ A FK +L+ P + T I S N+ P VH + G D+
Sbjct: 235 QNGLFDKAILYFKEMLKEGFHPSSVT---IMNLVSANA-FP--ENVHCYVVKCGFTNDAS 288
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++LV Y+K + A +++ DL+ ++IS ++ G + +++ F ++L
Sbjct: 289 VVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSYSEKGDIESAVECFIQTIQLD 348
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD L+G++ G+ PS ++G HG+ +KS + V++ L+S+Y+R + + +A
Sbjct: 349 IKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAAL 408
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F + L+TW+++I+G Q G A+ F +++M GKK D + IAS+L+ +
Sbjct: 409 SLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLG 468
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
N+ G +H Y++++ + + +AL+DMYSKCG L +VF + + + T+N++I
Sbjct: 469 NLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYNIKDPCLATWNAIIS 528
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G L+G + AF + + E+GL PD+ TF +L AC HGGLV G E F MT+EYG+
Sbjct: 529 GYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEYFNIMTKEYGLM 588
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+HY +V LLG G +EA FI + D AV GALL+ C I L E +A +
Sbjct: 589 PSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQREVKLGECLAKK 648
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
LF + + G + V++SN YA GRWDDV ++R+ + D+G +GVS +
Sbjct: 649 LFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVI 697
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 214/450 (47%), Gaps = 12/450 (2%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
T L+ LY AR +FD+ R V WN +I Y+ A LF ++LR K
Sbjct: 95 TSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRENFK 154
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
P+ T + +C + R +HG I +G G DS ++AL++ Y+K ++ + +
Sbjct: 155 PNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEASQLL 214
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FD + + +V N+MI + G +DK++ F ML+ G P T++ L+S P
Sbjct: 215 FDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAFP--- 271
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+ +H + +K F + V + LV +YA+ N+A ++ DL+T +A+I+ Y
Sbjct: 272 ---ENVHCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLITLTAIISSY 328
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
S++GD A+ F + K D V + VL ++ G HGY ++ G
Sbjct: 329 SEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDC 388
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+V++ L+ +YS+ + + +F M E+ +IT+NS+I G G + A E F ++
Sbjct: 389 LVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMC 448
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNL 459
G PD T ++LL CC G + G + + + + E +I ++ + G L
Sbjct: 449 GKKPDAITIASLLSGCCQLGNLRIGETLHSYILRN---NVRVEDFIGTALIDMYSKCGRL 505
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
+ A +++ P A A++S +YG
Sbjct: 506 DYAEKVFYNIKDPC-LATWNAIISGYSLYG 534
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 226/500 (45%), Gaps = 54/500 (10%)
Query: 85 FNDAKS----LFKNLLRTQLKPDNFTYACITRA---------CSENSDLPGLRFVHGGAI 131
F +A S +F+ +L+ + P+ FT++ + +A C + L R + +
Sbjct: 25 FQNATSPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQA-RQIQTQCL 83
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G+ + ++L+ Y KL A +FD +S D+V N +I G++ G+ ++Q
Sbjct: 84 KRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQ 143
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF MLR P++ T+V L+ L+ G+ IHGF +K+ F ++++ L+SMYA
Sbjct: 144 LFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYA 203
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C+ + ++ +F+ + +V+W+ +I Y Q G + KA+ YF+++ +G V I +
Sbjct: 204 KCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMN 263
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
+++A A NV H YV++ GF V ++LV +Y+K G+ Q+++ ++
Sbjct: 264 LVSANAFPENV------HCYVVKCGFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKD 317
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL----------CACC-HG 420
+IT ++I G A E F I+ + PD +L C HG
Sbjct: 318 LITLTAIISSYSEKGDIESAVECFIQTIQLDIKPDAVALIGVLHGITNPSHFAIGCTFHG 377
Query: 421 -----GLVNDG-------------REIFTRMTEEYGIQAKT----EHYIYMVKLLGLAGN 458
GL ND EI ++ Y ++ K I G + +
Sbjct: 378 YGVKSGLSNDCLVANGLISLYSRFDEIEAALSLFYDMREKPLITWNSMISGCVQAGKSSD 437
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY-KVMLSN 517
E +S + K D +LLS C GN + E + + N+ R + L +
Sbjct: 438 AMELFSEMSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALID 497
Query: 518 TYAEDGRWDDVMKLRDDIVD 537
Y++ GR D K+ +I D
Sbjct: 498 MYSKCGRLDYAEKVFYNIKD 517
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 132/259 (50%), Gaps = 13/259 (5%)
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG-LWEPSLLSV- 223
S P+L L +S+ +L +F +L+ P+E+T LI L PS
Sbjct: 14 SRPNLSLFHSLFQNAT-----SPALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCP 68
Query: 224 ------GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
+ I CLK + + +V + L+ +Y + + A ++F+ + + D+V+W+ L
Sbjct: 69 STAALQARQIQTQCLKRGVNQFIHVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVL 128
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I GYSQ G A+ F + + K + I S+L + ++ G IHG+ I+ GF
Sbjct: 129 ICGYSQNGYLYHAIQLFVDMLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGF 188
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
L +++AL+ MY+KC L +F+ M E++++++N++I G +G +A +F++
Sbjct: 189 GLDSHLNNALMSMYAKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQNGLFDKAILYFKE 248
Query: 398 IIEKGLNPDESTFSALLCA 416
++++G +P T L+ A
Sbjct: 249 MLKEGFHPSSVTIMNLVSA 267
>gi|359486457|ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 297 bits (761), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 272/527 (51%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V K + DP+ T L+ +YA + + A+ +FD+ + V L N++I A+
Sbjct: 264 RQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGN 323
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R DA L+ + + D+FT + + CS R VH I + +
Sbjct: 324 GRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQ 383
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL+T Y K ++A VF + + D+V SMI+GF + +L LF M + G
Sbjct: 384 SALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVK 443
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D + +IS + +G IHGF +K +S +V+ LV MY++ SA V
Sbjct: 444 ADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 503
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+S+ + +LV W+++I+ YS G ++ ++ G D V I +VL A + A +
Sbjct: 504 FSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAAL 563
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H Y I+ + V +AL+DMY KCG L +FE M RN++T+NS+I G
Sbjct: 564 LKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGY 623
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG +A F+++ PDE TF AL+ +C H G+V +G +F M EYG++ +
Sbjct: 624 GSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPR 683
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V LLG AG L++AYSFI +P D +V LL C + N +L E+VA L
Sbjct: 684 MEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLL 743
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ +P +G+ V L N Y E WD LR + GL+K G SW+
Sbjct: 744 KMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWI 790
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 193/396 (48%), Gaps = 3/396 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS-VFLWNSIIRAYAL 81
+++H + + DP+ T L+ +Y+ + A LF K RS + WN +I +
Sbjct: 162 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 221
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ + L+ K + ++ ACS L R VH I D
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L+T Y+K +++A KVFD V D ++ L N+MIS F G +L L++ M + G+
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGE 340
Query: 202 TP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
TP D +T+ L+SG G+ +H +K S S + S L++MY +C A
Sbjct: 341 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 400
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF ++ D+V W ++I G+ Q + AL FR + +G KAD ++ SV++A
Sbjct: 401 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 460
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
NV G +IHG+ I+ G E V V+ +LVDMYSK G+ VF +M +N++ +NS+I
Sbjct: 461 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 520
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+G + I++ G D + + +L A
Sbjct: 521 CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVA 556
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 183/414 (44%), Gaps = 25/414 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR- 67
+L+ S +L + +HA + L DP+ AT L+ +Y +L SA +FDK +
Sbjct: 61 LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 120
Query: 68 ----SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+ +WN +I Y F + + F R Q E S
Sbjct: 121 DSAPDITVWNPVIDGYFKYGHFEEGLAQF---CRMQ----------------ELSWYMAG 161
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAH 182
R +HG I + D +AL+ YS S EA +F + + ++V N MI GF
Sbjct: 162 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 221
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G W+KSL+L+ + G + +L G+ +H +K +F YV
Sbjct: 222 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 281
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++MYA+ + A VF+ + ++ +A+I+ + G AL + K+
Sbjct: 282 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 341
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D I+S+L+ + + G +H VI+ + +V + SAL+ MY KCG
Sbjct: 342 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADS 401
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
VF TM ER+++ + S+I G + A + FR + ++G+ D ++++ A
Sbjct: 402 VFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 455
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 186/417 (44%), Gaps = 27/417 (6%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
NS I+A +++ A L + L FT+ + + C+ S+L R +H +
Sbjct: 24 NSKIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVT 83
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-----PDLVLCNSMISGFAHCGFWD 187
GL D +++L+ Y K L+ A++VFD +S+ PD+ + N +I G+ G ++
Sbjct: 84 MGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFE 143
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ L F M L S G+ IHG+ +++ F+ Y+ + L+
Sbjct: 144 EGLAQFCRMQEL-------------------SWYMAGRQIHGYIIRNMFEGDPYLETALI 184
Query: 248 SMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
MY+ C+ A+ +F L + ++V W+ +I G+ + G + K+L + + K
Sbjct: 185 GMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVS 244
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
A + + G +H VI+ F+ V ++L+ MY+K G + +VF+
Sbjct: 245 ASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQ 304
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ ++ + N++I +G Y A + + D T S+LL C G + G
Sbjct: 305 VLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFG 364
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
R + + + +Q+ ++ + G+ E+A S +++ K D G++++
Sbjct: 365 RTVHAEVIKR-SMQSNVAIQSALLTMYYKCGSTEDADSVFYTM-KERDVVAWGSMIA 419
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L + K LHA + + D L+ +Y L A+++F+ P+R+
Sbjct: 553 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 612
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WNS+I Y +A LFK + R++ PD T+ + +CS H
Sbjct: 613 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCS-----------HS 661
Query: 129 GAIVSGL 135
G + GL
Sbjct: 662 GMVEEGL 668
>gi|449507426|ref|XP_004163029.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 284/540 (52%), Gaps = 7/540 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ + K++HA + S+ + + K+ L A + F + + +N +IR
Sbjct: 44 SIKQLKQIHAQLLTNSIHKPNSFLYKIADL----KDFAYASVFFSNILDPTEYSFNVMIR 99
Query: 78 AYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ A ++ + A + + LKP+N TY + ACS + R H I GL
Sbjct: 100 GLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLD 159
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D S +L+T Y++ + +A KVFD +S DLV NSMISG++ +++ LF M
Sbjct: 160 EDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREM 219
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+E +LV ++ E L +G + F +++ ++ S L+ MY +C +
Sbjct: 220 MEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDL 279
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA +F+S+ D VTW+A+ITGY+Q G +A+ F+ + M D + + +L+A
Sbjct: 280 VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G + Y + GF+ V V +ALVDMY+KCG L +VF M ++N +++N
Sbjct: 340 ASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKNEVSWN 399
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++I L HG +A F+ ++ +G ++P++ TF +L AC H GLV++GR +F M+
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMS 459
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+G+ K EHY MV L AG+LEEA+ F+ ++P+ D + GALL C N D++
Sbjct: 460 SSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDIS 519
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
E V L E +P V+ S YA RWDD ++R + G+ K G SW+ +S
Sbjct: 520 ERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQ 579
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 110/274 (40%), Gaps = 66/274 (24%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L K++ ++ D + T LV +YA L +A +F P+++
Sbjct: 335 ILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPKKN 394
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRT--QLKPDNFTYACITRACSENSDLPGLRFV 126
WN++I A A + +A +LFK+++ + P++ T+ + AC V
Sbjct: 395 EVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC-----------V 443
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-----PDLVLCNSMISGFA 181
H G L+DE ++F +S P + + M+ F+
Sbjct: 444 HAG------------------------LVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYD 240
G +++ +D+++ + + PDE L L+ G C K + D +
Sbjct: 480 RAGHLEEA---WDFVMTMPEKPDEVILGALL----------------GACQKRKNIDISE 520
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
V +L+ + NS +V +S + +L W
Sbjct: 521 RVMKLLLELEPS----NSGNYVISSKLYANLRRW 550
>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cucumis sativus]
Length = 939
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 284/535 (53%), Gaps = 5/535 (0%)
Query: 18 SLSRTKE---LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
SL KE +H ++ K + D L+ +Y L AR +F K + WN+
Sbjct: 234 SLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNT 293
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I YA R + LF +++ PD + RAC ++ DL +FVH I SG
Sbjct: 294 MICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSG 352
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D++ + L+ Y+K + A +VFD D V NS+I+G+ G++ + L+ F
Sbjct: 353 FECDTVACNILIDMYAKCGDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK 412
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M+++ + PD T V L+S + + ++ G+GIH +K F++ + + L+ +YA+C
Sbjct: 413 -MMKMERKPDSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCG 471
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
M+ VF+ + D+++W+ +I D ++ +G D + +L
Sbjct: 472 EMDDLLKVFSYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILP 531
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+ A G IHGY+ + GFE +V + +AL++MYSKCG L I+VF+ M E++++T
Sbjct: 532 MCSLLAVRRQGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVT 591
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ ++I G++G +A + F+D+ G+ PD F A + AC H G+V +G F RM
Sbjct: 592 WTALISAFGMYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMK 651
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+Y ++ + EHY +V LL +G L +A FI S+P D ++ GALLS C GN+++A
Sbjct: 652 TDYNLEPRMEHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIA 711
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ V+ ++ E + Y V++SN YA G+WD V +R+ + GL+KE G SW+
Sbjct: 712 QRVSKKILELNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWI 766
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 223/443 (50%), Gaps = 11/443 (2%)
Query: 6 HFLVLELSKSHQSLSRTKEL---HALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILF 61
FL L K+ S T +L H+L+ + L ++ KL+ YA + + + S +
Sbjct: 19 EFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFR 78
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
+P +V+LWNSIIRA F A + + +L+PD FT+ + +C+ DL
Sbjct: 79 SISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLE 138
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
VH A+ G D +AL+ YS+ +D A VF+ +S+ D V NS+ISG+
Sbjct: 139 LGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYC 198
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG--IHGFCLKSSFDSY 239
GFW+ +L ++ G PD +T+ ++ L SL++V +G +HG K
Sbjct: 199 SNGFWEDALDMYHKFRMTGMVPDCFTMSSVL--LACGSLMAVKEGVAVHGVIEKIGIAGD 256
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ + L+SMY + + A VF+ + D VTW+ +I GY+Q G + ++ F + +
Sbjct: 257 VIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDM-I 315
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G D + I S + A +S ++ G +H Y+I GFE + + L+DMY+KCG L
Sbjct: 316 DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLA 375
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+VF+T ++ +T+NS+I G G+ + E F+ +++ PD TF LL
Sbjct: 376 AQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFK-MMKMERKPDSVTFVLLLSIFSQ 434
Query: 420 GGLVNDGREIFTRMTEEYGIQAK 442
+N GR I + ++G +A+
Sbjct: 435 LADINQGRGIHCDVI-KFGFEAE 456
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 2/335 (0%)
Query: 94 NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
N T F + + + S + P LR VH I SGL I S L++ Y+++
Sbjct: 9 NFNNTPEPSQEFLRSSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVK 68
Query: 154 LIDEAIKVFDGVSDPDLV-LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
++ VF +S + V L NS+I H G + ++L + M PD +T +I
Sbjct: 69 DPISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVI 128
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+ L +G +H ++ F+S Y+ + L+ MY+R +++A +VF + + D V
Sbjct: 129 NSCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSV 188
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W++LI+GY G + AL + K M G D ++SVL A V G +HG +
Sbjct: 189 SWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+ G V++ + L+ MY K L +VF M+ ++ +T+N++I G G +
Sbjct: 249 EKIGIAGDVIIGNGLLSMYFKFERLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEASV 308
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ F D+I+ G PD + ++ + AC G + G+
Sbjct: 309 KLFMDMID-GFVPDMLSITSTIRACGQSGDLQVGK 342
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 124/299 (41%), Gaps = 16/299 (5%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+L + +++ + +H V K + L+ +YA + +F
Sbjct: 427 LLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAH 486
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFK--NLLRTQ-LKPDNFTYACITRACSENSDLPGLR 124
+ WN++I A + F+D F+ N +RT+ L PD T I CS + +
Sbjct: 487 DIISWNTVI---ASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQGK 543
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG SG + +AL+ YSK ++ IKVF + + D+V ++IS F G
Sbjct: 544 EIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFGMYG 603
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSY 239
K+L+ F M G PD + I SG+ + L + + L+ + Y
Sbjct: 604 EGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRMEHY 663
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ +V + AR + A S+ PD W AL++ +G+ A +K+
Sbjct: 664 ----ACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKI 718
>gi|297736478|emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 176/527 (33%), Positives = 272/527 (51%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V K + DP+ T L+ +YA + + A+ +FD+ + V L N++I A+
Sbjct: 669 RQVHCDVIKMNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGN 728
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R DA L+ + + D+FT + + CS R VH I + +
Sbjct: 729 GRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQ 788
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL+T Y K ++A VF + + D+V SMI+GF + +L LF M + G
Sbjct: 789 SALLTMYYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVK 848
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D + +IS + +G IHGF +K +S +V+ LV MY++ SA V
Sbjct: 849 ADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMV 908
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+S+ + +LV W+++I+ YS G ++ ++ G D V I +VL A + A +
Sbjct: 909 FSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVAVSSVAAL 968
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H Y I+ + V +AL+DMY KCG L +FE M RN++T+NS+I G
Sbjct: 969 LKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRNLVTWNSMIAGY 1028
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG +A F+++ PDE TF AL+ +C H G+V +G +F M EYG++ +
Sbjct: 1029 GSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCSHSGMVEEGLNLFQLMRIEYGVEPR 1088
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V LLG AG L++AYSFI +P D +V LL C + N +L E+VA L
Sbjct: 1089 MEHYASVVDLLGRAGRLDDAYSFIRGMPIDADRSVWLCLLFACRAHRNMELGELVADNLL 1148
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ +P +G+ V L N Y E WD LR + GL+K G SW+
Sbjct: 1149 KMEPARGSNYVPLLNLYGEVEMWDRAANLRASMKGRGLKKSPGCSWI 1195
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 193/396 (48%), Gaps = 3/396 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS-VFLWNSIIRAYAL 81
+++H + + DP+ T L+ +Y+ + A LF K RS + WN +I +
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ + L+ K + ++ ACS L R VH I D
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L+T Y+K +++A KVFD V D ++ L N+MIS F G +L L++ M + G+
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKM-KAGE 745
Query: 202 TP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
TP D +T+ L+SG G+ +H +K S S + S L++MY +C A
Sbjct: 746 TPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDAD 805
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF ++ D+V W ++I G+ Q + AL FR + +G KAD ++ SV++A
Sbjct: 806 SVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISAGLGLE 865
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
NV G +IHG+ I+ G E V V+ +LVDMYSK G+ VF +M +N++ +NS+I
Sbjct: 866 NVELGHLIHGFAIKRGLESDVFVACSLVDMYSKFGFAESAEMVFSSMPNKNLVAWNSMIS 925
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+G + I++ G D + + +L A
Sbjct: 926 CYSWNGLPEMSINLLPQILQHGFYLDSVSITTVLVA 961
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 191/414 (46%), Gaps = 6/414 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR- 67
+L+ S +L + +HA + L DP+ AT L+ +Y +L SA +FDK +
Sbjct: 447 LLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESR 506
Query: 68 ----SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+ +WN +I Y F + + F + ++PD ++ + + C+ S
Sbjct: 507 DSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAG 566
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAH 182
R +HG I + D +AL+ YS S EA +F + + ++V N MI GF
Sbjct: 567 RQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVE 626
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G W+KSL+L+ + G + +L G+ +H +K +F YV
Sbjct: 627 NGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYV 686
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++MYA+ + A VF+ + ++ +A+I+ + G AL + K+
Sbjct: 687 CTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNKMKAGET 746
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D I+S+L+ + + G +H VI+ + +V + SAL+ MY KCG
Sbjct: 747 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTMYYKCGSTEDADS 806
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
VF TM ER+++ + S+I G + A + FR + ++G+ D ++++ A
Sbjct: 807 VFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVMTSVISA 860
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 105/440 (23%), Positives = 209/440 (47%), Gaps = 16/440 (3%)
Query: 57 ARILFDK-TPQRSVFLWNSI-----IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI 110
ARI+ ++ TP+++V ++ I+A +++ A L + L FT+ +
Sbjct: 388 ARIIDNELTPKKAVLELMNLPQVEEIKALVQQGKYSQALELHSKTPHSALTTAKFTFPSL 447
Query: 111 TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD--- 167
+ C+ S+L R +H + GL D +++L+ Y K L+ A++VFD +S+
Sbjct: 448 LKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGLLGSALQVFDKMSESRD 507
Query: 168 --PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
PD+ + N +I G+ G +++ L F M LG PD Y+L ++ S G+
Sbjct: 508 SAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLSIVLGICNRLSWYMAGR 567
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQ 284
IHG+ +++ F+ Y+ + L+ MY+ C+ A+ +F L + ++V W+ +I G+ +
Sbjct: 568 QIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENRSNIVAWNVMIGGFVEN 627
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
G + K+L + + K A + + G +H VI+ F+ V
Sbjct: 628 GMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQVHCDVIKMNFQDDPYVC 687
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
++L+ MY+K G + +VF+ + ++ + N++I +G Y A + ++ G
Sbjct: 688 TSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGNGRAYDALGLYNK-MKAGET 746
Query: 405 P-DESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
P D T S+LL C G + GR + + + +Q+ ++ + G+ E+A
Sbjct: 747 PVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKR-SMQSNVAIQSALLTMYYKCGSTEDAD 805
Query: 464 SFIWSLPKPVDPAVSGALLS 483
S +++ K D G++++
Sbjct: 806 SVFYTM-KERDVVAWGSMIA 824
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/447 (21%), Positives = 184/447 (41%), Gaps = 60/447 (13%)
Query: 144 ALVTAYS-KLSLIDEAIKVFDGVSDPDLVLCNSM-------ISGFAHCGFWDKSLQLFDW 195
AL Y+ K+ ++ ++ D P + M I G + ++L+L
Sbjct: 372 ALAQKYNVKMPVLTAVARIIDNELTPKKAVLELMNLPQVEEIKALVQQGKYSQALELHSK 431
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
T ++T L+ S L G+ IH + S Y+++ L++MY +C
Sbjct: 432 TPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLINMYVKCGL 491
Query: 256 MNSAYHVFNSLFH-----PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+ SA VF+ + PD+ W+ +I GY + G + + L F ++ G + D ++
Sbjct: 492 LGSALQVFDKMSESRDSAPDITVWNPVIDGYFKYGHFEEGLAQFCRMQELGIRPDGYSLS 551
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
VL + + G IHGY+I++ FE + +AL+ MYS C +F + R
Sbjct: 552 IVLGICNRLSWYMAGRQIHGYIIRNMFEGDPYLETALIGMYSSCSRPMEAWSLFGKLENR 611
Query: 371 -NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
NI+ +N +I G +G ++ E + + ++F+ AC HG +++ GR++
Sbjct: 612 SNIVAWNVMIGGFVENGMWEKSLELYSLAKNENCKLVSASFTGAFTACSHGEVLDFGRQV 671
Query: 430 FTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEA------------------------- 462
+ + + + + Y+ ++ + +G++E+A
Sbjct: 672 HCDVIK---MNFQDDPYVCTSLLTMYAKSGSVEDAKKVFDQVLDKEVELRNAMISAFIGN 728
Query: 463 ---------YSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG-AYK 512
Y+ + + PVD +LLS C + G+ D V ++ + + A +
Sbjct: 729 GRAYDALGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQ 788
Query: 513 VMLSNTYAEDGRWDD------VMKLRD 533
L Y + G +D MK RD
Sbjct: 789 SALLTMYYKCGSTEDADSVFYTMKERD 815
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L + K LHA + + D L+ +Y L A+++F+ P+R+
Sbjct: 958 VLVAVSSVAALLKGKTLHAYQIRLQIPSDLQVENALIDMYVKCGCLKYAQLIFENMPRRN 1017
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WNS+I Y +A LFK + R++ PD T+ + +CS H
Sbjct: 1018 LVTWNSMIAGYGSHGNCEEAVRLFKEMKRSETAPDEVTFLALITSCS-----------HS 1066
Query: 129 GAIVSGL 135
G + GL
Sbjct: 1067 GMVEEGL 1073
>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 273/529 (51%), Gaps = 1/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H + K L+ D + LV +Y N A LF++ P++ V WN++I Y +
Sbjct: 126 KMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQS 185
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F DA F + R +P++ T +C+ DL +H I SG DS S
Sbjct: 186 GNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFIS 245
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K ++ AI++F+ + +V NSMISG+ G +QLF M G
Sbjct: 246 SALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVK 305
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TL LI + L G+ +HG+ +++ +V+S L+ +Y +C + A +
Sbjct: 306 PTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKI 365
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + +V+W+ +I+GY +G +AL F ++ ++D + SVL A ++ A +
Sbjct: 366 FKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAAL 425
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ + + +V AL+DMY+KCG + VF+ + +R+++++ S+I
Sbjct: 426 EKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMITAY 485
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG Y A E F ++++ + PD F A+L AC H GLV++G F +M YGI +
Sbjct: 486 GSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIPR 545
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA-VSGALLSCCHIYGNSDLAEIVAHQL 501
EHY ++ LLG AG L EAY + P+ D + L S C ++ N DL +A L
Sbjct: 546 VEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLHRNIDLGAEIARTL 605
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ DP + ++LSN YA +WD+V +R + + GL+K G SW+
Sbjct: 606 IDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSWIE 654
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/460 (27%), Positives = 231/460 (50%), Gaps = 9/460 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR-SVFLWNSI 75
+SL + K +H V L D F L+ Y ++ A+ +FD + LWN +
Sbjct: 17 KSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPCEISLWNGL 76
Query: 76 IRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+ Y + + +A LF+ LL LKPD++TY + +AC + +H I +G
Sbjct: 77 MAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTG 136
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L D + S+LV Y K + ++AI +F+ + + D+ N++IS + G + +L+ F
Sbjct: 137 LMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNFKDALEYFG 196
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M R G P+ T+ IS L+ G IH + S F ++SS LV MY +C
Sbjct: 197 LMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSALVDMYGKCG 256
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ A +F + +V W+++I+GY +GD + F+++ +G K ++S++
Sbjct: 257 HLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIM 316
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
++SA + G +HGY I++ + V V+S+L+D+Y KCG + L ++F+ + + +++
Sbjct: 317 VCSRSARLLEGKFVHGYTIRNRIQPDVFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVS 376
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N +I G G ++A F ++ + + D TF+++L AC + G+EI +
Sbjct: 377 WNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLII 436
Query: 435 EEYGIQAKTEHYIYMVKLLGL---AGNLEEAYSFIWSLPK 471
E + + + M LL + G ++EA+S LPK
Sbjct: 437 E----KKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPK 472
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 162/320 (50%), Gaps = 2/320 (0%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP- 168
+ RAC + L + +H + GL D L+ Y L D A VFD + +P
Sbjct: 9 LLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVFDNMENPC 68
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGI 227
++ L N +++G+ + ++L+LF+ +L PD YT + +G+ I
Sbjct: 69 EISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHRYVLGKMI 128
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
H +K+ V S LV MY +CN A +FN + D+ W+ +I+ Y Q G++
Sbjct: 129 HTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISCYYQSGNF 188
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
AL YF + G + + V I + +++ A+ ++ G IH +I GF L +SSAL
Sbjct: 189 KDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLDSFISSAL 248
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
VDMY KCG+L + I++FE M ++ ++ +NS+I G GL G + F+ + +G+ P
Sbjct: 249 VDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLFKRMYNEGVKPTL 308
Query: 408 STFSALLCACCHGGLVNDGR 427
+T S+L+ C + +G+
Sbjct: 309 TTLSSLIMVCSRSARLLEGK 328
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 109/399 (27%), Positives = 187/399 (46%), Gaps = 5/399 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+R E+H + + L D F ++ LV +Y L A +F++ P+++V WNS+I
Sbjct: 223 LNRGMEIHEELINSGFLLDSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISG 282
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y L LFK + +KP T + + CS ++ L +FVHG I + + D
Sbjct: 283 YGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQPD 342
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+S+L+ Y K ++ A K+F + +V N MISG+ G ++L LF M +
Sbjct: 343 VFVNSSLMDLYFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRK 402
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
D T +++ + + L G+ IH ++ D+ + V L+ MYA+C ++
Sbjct: 403 SYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDE 462
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ VF L DLV+W+++IT Y G AL F ++ K D V ++L+A
Sbjct: 463 AFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGH 522
Query: 319 SANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITY 375
+ V G +I +G V S L+D+ + G L ++ + E ++
Sbjct: 523 AGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELL 582
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+++ LH E R +I+K +PD+S+ LL
Sbjct: 583 STLFSACRLHRNIDLGAEIARTLIDK--DPDDSSTYILL 619
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 128/296 (43%), Gaps = 12/296 (4%)
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D L+ L+ L G+ IH + + ++ L++ Y C+ + A VF
Sbjct: 2 DTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCVF 61
Query: 264 NSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKL-NMQGKKADPVLIASVLAAAAKSAN 321
+++ +P ++ W+ L+ GY++ Y +AL F KL + K D SV A
Sbjct: 62 DNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLHR 121
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G +IH +I+ G + ++V S+LV MY KC I +F M E+++ +N+VI
Sbjct: 122 YVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWLFNEMPEKDVACWNTVISC 181
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G A E+F + G P+ T + + +C +N G EI + G
Sbjct: 182 YYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINS-GFLL 240
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA---------VSGALLSCCHIY 488
+ +V + G G+LE A +PK A + G ++SC ++
Sbjct: 241 DSFISSALVDMYGKCGHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDIISCIQLF 296
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + KE+H L+ + L + L+ +YA + A +F P+R + W S+I
Sbjct: 424 ALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPKRDLVSWTSMIT 483
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
AY A LF +L++ +KPD + I AC
Sbjct: 484 AYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSAC 520
>gi|449461217|ref|XP_004148338.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Cucumis sativus]
Length = 619
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 283/540 (52%), Gaps = 7/540 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ + K++HA + S+ + + K+ L A + F + + +N +IR
Sbjct: 44 SIKQLKQIHAQLLTNSIHKPNSFLYKIADL----KDFAYASVFFSNILDPTEYSFNVMIR 99
Query: 78 AYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ A ++ + A + + LKP+N TY + ACS + R H I GL
Sbjct: 100 GLSTAWNKSSLALEFYSRMKFLGLKPNNLTYPFLFIACSNLLAVENGRMGHCSVIRRGLD 159
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D S +L+T Y++ + +A KVFD +S DLV NSMISG++ +++ LF M
Sbjct: 160 EDGHVSHSLITMYARCGKMGDARKVFDEISQKDLVSWNSMISGYSKMRHAGEAVGLFREM 219
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+E +LV ++ E L +G + F +++ ++ S L+ MY +C +
Sbjct: 220 MEAGFQPNEMSLVSVLGACGELGDLKLGTWVEEFVVENKMTLNYFMGSALIHMYGKCGDL 279
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA +F+S+ D VTW+A+ITGY+Q G +A+ F+ + M D + + +L+A
Sbjct: 280 VSARRIFDSMKKKDKVTWNAMITGYAQNGMSEEAIKLFQDMRMSSTAPDQITLIGILSAC 339
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G + Y + GF+ V V +ALVDMY+KCG L +VF M +N +++N
Sbjct: 340 ASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKNEVSWN 399
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++I L HG +A F+ ++ +G ++P++ TF +L AC H GLV++GR +F M+
Sbjct: 400 AMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSACVHAGLVDEGRRLFHMMS 459
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+G+ K EHY MV L AG+LEEA+ F+ ++P+ D + GALL C N D++
Sbjct: 460 SSFGLVPKIEHYSCMVDLFSRAGHLEEAWDFVMTMPEKPDEVILGALLGACQKRKNIDIS 519
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
E V L E +P V+ S YA RWDD ++R + G+ K G SW+ +S
Sbjct: 520 ERVMKLLLELEPSNSGNYVISSKLYANLRRWDDSARMRMLMKQKGVSKTPGCSWIDINSQ 579
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 109/274 (39%), Gaps = 66/274 (24%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L K++ ++ D + T LV +YA L +A +F P ++
Sbjct: 335 ILSACASIGALDLGKQVEIYASERGFQDDVYVGTALVDMYAKCGSLDNAFRVFYGMPNKN 394
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRT--QLKPDNFTYACITRACSENSDLPGLRFV 126
WN++I A A + +A +LFK+++ + P++ T+ + AC V
Sbjct: 395 EVSWNAMISALAFHGQAQEALALFKSMMNEGGTVSPNDITFVGVLSAC-----------V 443
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-----PDLVLCNSMISGFA 181
H G L+DE ++F +S P + + M+ F+
Sbjct: 444 HAG------------------------LVDEGRRLFHMMSSSFGLVPKIEHYSCMVDLFS 479
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYD 240
G +++ +D+++ + + PDE L L+ G C K + D +
Sbjct: 480 RAGHLEEA---WDFVMTMPEKPDEVILGALL----------------GACQKRKNIDISE 520
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
V +L+ + NS +V +S + +L W
Sbjct: 521 RVMKLLLELEPS----NSGNYVISSKLYANLRRW 550
>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
Length = 842
Score = 296 bits (759), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 288/559 (51%), Gaps = 33/559 (5%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H L+ K +D F LV YA L SAR +FD+ +R+V W S+I YA
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 84 RFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
DA LF ++R ++ P++ T C+ AC++ DL V+ SG+ + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K + ID A ++FD +L LCN+M S + G ++L +F+ M+ G
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +++ IS + + G+ HG+ L++ F+S+D + + L+ MY +C+ ++A+ +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL------------------------- 297
F+ + + +VTW++++ GY + G+ A F +
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 298 -------NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
+ +G AD V + S+ +A + I+ Y+ ++G +L V + + LVDM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
+S+CG + +F +++ R++ + + I + + G +A E F D+IE+GL PD F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
L AC HGGLV G+EIF M + +G+ + HY MV LLG AG LEEA I +P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 471 KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMK 530
+ + +LL+ C + GN ++A A ++ P + V+LSN YA GRW+D+ K
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 531 LRDDIVDNGLRKEAGVSWV 549
+R + + GLRK G S +
Sbjct: 695 VRLSMKEKGLRKPPGTSSI 713
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 261/544 (47%), Gaps = 16/544 (2%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRL---YALNNVLPSARILFDKTPQR-SV 69
K+ +++ K H + K L D TKLV L A+ +F+ + +
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTC 99
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
F++NS+IR YA + N+A LF ++ + + PD +T+ AC+++ +HG
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ G +D ++LV Y++ +D A KVFD +S+ ++V SMI G+A F +
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 190 LQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ LF M+R + TP+ T+V +IS + L G+ ++ F S + D + S LV
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +CN ++ A +F+ +L +A+ + Y +QG +AL F + G + D +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ S +++ ++ N+ G HGYV+++GFE + +AL+DMY KC ++F+ MS
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ ++T+NS++ G +G A+E F + EK + + S L+ G L + E
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV----QGSLFEEAIE 455
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA---YSFIWSLPKPVDPAVSGALLSCC 485
+F M + G+ A + + G G L+ A Y +I +D + L+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
G+ + A + + L D + R ++L DD+++ GL+ + G
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER---AIELFDDMIEQGLKPD-G 571
Query: 546 VSWV 549
V++V
Sbjct: 572 VAFV 575
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 167/352 (47%), Gaps = 22/352 (6%)
Query: 98 TQLKPDNFTYACITRACSEN----SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
T KP + T+A + + L+ H GL D T + LV +L
Sbjct: 19 TTTKPSLLNQSKCTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 78
Query: 154 LIDE---AIKVFDGV-SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV 209
+ A +VF+ S + NS+I G+A G ++++ LF M+ G +PD+YT
Sbjct: 79 TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFP 138
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
+S + G IHG +K + +V + LV YA C ++SA VF+ +
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 270 DLVTWSALITGYSQQGDYGKALY--YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
++V+W+++I GY+++ D+ K +FR + + + V + V++A AK ++ G
Sbjct: 199 NVVSWTSMICGYARR-DFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEK 257
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
++ ++ G E++ ++ SALVDMY KC + + ++F+ N+ N++ G
Sbjct: 258 VYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGL 317
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCAC-----------CHGGLVNDGRE 428
T +A F +++ G+ PD + + + +C CHG ++ +G E
Sbjct: 318 TREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 172/404 (42%), Gaps = 34/404 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L ++++A + + + + + LV +Y N + A+ LFD+ ++ L N++
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y +A +F ++ + ++PD + +CS+ ++ + HG + +G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+AL+ Y K D A ++FD +S+ +V NS+++G+ G D + + F+ M
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 197 --------------------------------LRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ G D T++ + S L +
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ I+ + K+ + + LV M++RC SA +FNSL + D+ W+A I +
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMV 343
G+ +A+ F + QG K D V L A + V G I +++ HG +
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 344 SSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHG 386
+VD+ + G L +Q+ E M E N + +NS++ + G
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>gi|125525985|gb|EAY74099.1| hypothetical protein OsI_01984 [Oryza sativa Indica Group]
Length = 735
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 279/526 (53%), Gaps = 2/526 (0%)
Query: 26 HALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
HAL K S + + + T L+ +Y ++ AR +FD PQR+ F W++++ YA
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRMFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 85 FNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A LF+ +L + F + A S L +HG + GL +
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+LVT Y+K + A VF+ + + + ++MI+G+A G D ++ +F M G TP
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
E+T VG+++ + L+VG+ HG +K F+ YV S LV MYA+C C+ A F
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 379
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L+ D+V W+A+++G+ Q G++ +AL + +++ +G IAS L A A A +
Sbjct: 380 DQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 439
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
PG +H ++++G L V SAL MYSKCG L G+ VF + +R++I +NS+I G
Sbjct: 440 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 499
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+G A + F ++ +G PD TF +LCAC H GLV+ G E F+ MT++YG+ +
Sbjct: 500 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 559
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
+HY MV +L AG L+EA FI S+ + +L C + D+ +L E
Sbjct: 560 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLME 619
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
R + ++LSN YA +W+DV ++R + G+ K+ G SWV
Sbjct: 620 LGTRDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWV 665
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 165/360 (45%), Gaps = 1/360 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L+ K LL LV +YA + +A +F+ + +R+ W+++I YA
Sbjct: 240 EQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQN 299
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A S+F + P FT+ + A S+ L + HG + G
Sbjct: 300 GEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK 359
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y+K I +A + FD + + D+VL +M+SG G +++L L+ M + G
Sbjct: 360 SALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 419
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P + T+ + + L G+ +H +K V S L +MY++C + V
Sbjct: 420 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSV 479
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D++ W+++I+G+SQ G AL F ++ M+G D + ++L A + V
Sbjct: 480 FRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLV 539
Query: 323 WPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G + + +G + + +VD+ S+ G L E+++ + ++LG
Sbjct: 540 DRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLG 599
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L+ K+ H L+ K + + LV +YA + A+ FD+ +
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 386
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ LW +++ + +A +L+ + + + P T A RAC+ + L + +H
Sbjct: 387 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 446
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GLG + SAL T YSK +++ + VF + D D++ NS+ISGF+ G +
Sbjct: 447 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 506
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI 212
+L LF+ M G PD T + ++
Sbjct: 507 ALDLFEEMKMEGTIPDNITFINIL 530
>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 679
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 289/550 (52%), Gaps = 18/550 (3%)
Query: 9 VLELSKSHQSL-----SRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILF 61
+LEL + Q + ++LHA K ++ PF +++L+ LY+ + L AR +F
Sbjct: 11 LLELGFADQRMGLCAPQEVEQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIF 70
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
D+ +RS+ WN+II+ Y +D LF L+ L PDNFT C+ + C+ +
Sbjct: 71 DRIQRRSLIHWNTIIKCYVENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQ 129
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ +HG A+ G G D +LV YSK ID A KVFDG+ D D+VL NS+I G+A
Sbjct: 130 EGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMIDKDVVLWNSLIDGYA 189
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
CG D +LQLF+ M D ++ L+ GL + + + L +
Sbjct: 190 RCGEIDIALQLFEEM----PERDAFSWTVLVDGLSKCGKVESARK-----LFDQMPCRNL 240
Query: 242 VS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
VS + +++ Y + +SA +F + DLVTW+ +I GY G + A+ F +
Sbjct: 241 VSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKL 300
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + + SVL+A + A + G IH Y+ ++GFEL ++ ++L++MY+KCG +
Sbjct: 301 GSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESA 360
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+ VF + ++ + + ++I+GLG+HG A F ++ + GL P+ F +L AC H
Sbjct: 361 LTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHA 420
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV+DGR+ F M EY I+ EHY +V +L AG+LEEA + I ++P + + +
Sbjct: 421 GLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMS 480
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LL +G D+ E A ++ E P ++LSN YA G W+ V +R+ + G
Sbjct: 481 LLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGF 540
Query: 541 RKEAGVSWVS 550
RK+ G S V
Sbjct: 541 RKDPGCSSVE 550
>gi|15226150|ref|NP_180924.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101011|sp|P93005.1|PP181_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33680
gi|1707007|gb|AAC69139.1| hypothetical protein [Arabidopsis thaliana]
gi|330253774|gb|AEC08868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/543 (32%), Positives = 285/543 (52%), Gaps = 2/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+ + S QS + ++ HALV K S D + T LV +Y ++ +F P+R+
Sbjct: 124 IFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGL-RFV 126
+ W++++ YA R +A +F LR + + + Y S + + GL R +
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H I +GL S+ALVT YSK ++EA K+FD D + + ++M++G++ G
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++++LF M G P EYT+VG+++ + L G+ +H F LK F+ + + ++ L
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTAL 363
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MYA+ C+ A F+ L D+ W++LI+GY Q D +AL +R++ G +
Sbjct: 364 VDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPND 423
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ASVL A + A + G +HG+ I+HGF L V + SAL MYSKCG L G VF
Sbjct: 424 PTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRR 483
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
++++++N++I GL +G +A E F +++ +G+ PD+ TF ++ AC H G V G
Sbjct: 484 TPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERG 543
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
F M+++ G+ K +HY MV LL AG L+EA FI S + LLS C
Sbjct: 544 WFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACK 603
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+G +L +L R+ + V LS Y GR DV ++ + NG+ KE G
Sbjct: 604 NHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGC 663
Query: 547 SWV 549
SW+
Sbjct: 664 SWI 666
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 213/436 (48%), Gaps = 9/436 (2%)
Query: 3 FNLHFLVLELSKSHQSLSRT----KELHALVAKASLLRDPFYATKLVRLYALNNVLPSAR 58
N H L +H S R + +H + + +A LV YA L A
Sbjct: 10 LNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAH 69
Query: 59 ILFDKTPQRSVFLWNSIIRAYALAHRFNDAKS---LFKNLLRTQLKPDNFTYACITRACS 115
+F+ + V WNS+I Y+ + + + LF+ + + P+ +T A I +A S
Sbjct: 70 SIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAES 129
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
R H + D ++LV Y K L+++ +KVF + + + ++
Sbjct: 130 SLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWST 189
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGK--TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
M+SG+A G ++++++F+ LR + + +Y ++S L + +G+ IH +K
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK 249
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ + +S+ LV+MY++C +N A +F+S + +TWSA++TGYSQ G+ +A+
Sbjct: 250 NGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKL 309
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F ++ G K I VL A + + G +H ++++ GFE + ++ALVDMY+K
Sbjct: 310 FSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAK 369
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
G L + F+ + ER++ + S+I G + +A +R + G+ P++ T +++
Sbjct: 370 AGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASV 429
Query: 414 LCACCHGGLVNDGREI 429
L AC + G+++
Sbjct: 430 LKACSSLATLELGKQV 445
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 169/344 (49%), Gaps = 11/344 (3%)
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+T+L P T S+ +L R VHG I +G ++ LV Y+K +
Sbjct: 6 FQTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKL 65
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS---LQLFDWMLRLGKTPDEYTLVGLI 212
+A +F+ + D+V NS+I+G++ G S +QLF M P+ YTL G+
Sbjct: 66 AKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIF 125
Query: 213 SGLWEPSLLS--VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
E SL S VG+ H +K S YV + LV MY + + VF + +
Sbjct: 126 KA--ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 271 LVTWSALITGYSQQGDYGKALYYFR---KLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
TWS +++GY+ +G +A+ F + +G +D V A VL++ A + V G
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTA-VLSSLAATIYVGLGRQ 242
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IH I++G V +S+ALV MYSKC L ++F++ +RN IT+++++ G +G
Sbjct: 243 IHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGE 302
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +A + F + G+ P E T +L AC + +G+++ +
Sbjct: 303 SLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHS 346
>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
Length = 694
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 296/542 (54%), Gaps = 9/542 (1%)
Query: 13 SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLW 72
S +H++ + K++HA + L F TKL+ + + AR +FD P+ +F W
Sbjct: 30 SATHKA--QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPW 87
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N+IIR Y+ + F DA ++ N+ ++ PD+FT+ + +ACS S L RFVH
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD--LVLCNSMISGFAHCGFWDKSL 190
G D + L+ Y+K + A VF+G+ P+ +V +++S +A G ++L
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
++F M ++ PD LV +++ L G+ IH +K + + L +MY
Sbjct: 208 EIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + +A +F+ + P+L+ W+A+I+GY++ G +A+ F ++ + + D + I
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S ++A A+ ++ ++ YV + + V +SSAL+DM++KCG + VF+ +R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++ ++++I+G GLHG +A +R + G++P++ TF LL AC H G+V +G F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIY 488
RM ++ I + +HY ++ LLG AG+L++AY I + PV P V+ GALLS C +
Sbjct: 448 NRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM--PVQPGVTVWGALLSACKKH 504
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ +L E A QLF DP + V LSN YA WD V ++R + + GL K+ G SW
Sbjct: 505 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 549 VS 550
V
Sbjct: 565 VE 566
>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
Length = 1020
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 269/528 (50%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H+ + A D T LV++YA R +F+K R + WN++I A
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A ++ + R + P+ TY + AC + L R +H + G D
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQ 484
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL++ Y++ I +A +F+ + D++ +MI G A G ++L +F M + G
Sbjct: 485 NALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLK 544
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T +++ P+ L G+ IH +++ + +V++ LV+MY+ C + A V
Sbjct: 545 PNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQV 604
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D+V ++A+I GY+ +AL F +L +G K D V ++L A A S ++
Sbjct: 605 FDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSL 664
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
IH V++ G+ + +ALV Y+KCG + VF+ M +RN+I++N++I G
Sbjct: 665 EWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGC 724
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG + F + +G+ PD TF +LL AC H GL+ +GR F M+ ++GI
Sbjct: 725 AQHGRGQDVLQLFERMKMEGIKPDIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPT 784
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV LLG AG L+E + I ++P + + GALL C I+GN +AE A
Sbjct: 785 IEHYGCMVDLLGRAGQLDEVEALIKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSL 844
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ DP A V LS+ YA G WD KLR + G+ KE G SW+
Sbjct: 845 KLDPDNAAVYVALSHMYAAAGMWDSAAKLRKLMEQRGVTKEPGRSWIE 892
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 134/423 (31%), Positives = 219/423 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L KS +L +E+H KA LL D A ++ +YA + AR +FDK +S
Sbjct: 250 LLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDKMETKS 309
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W II YA A +F+ + + + P+ TY + A S + L + VH
Sbjct: 310 VVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHS 369
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G D +ALV Y+K + +VF+ + + DL+ N+MI G A G W++
Sbjct: 370 HILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEE 429
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +++ M R G P++ T V L++ P+ L G+ IH +K F V + L+S
Sbjct: 430 ASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALIS 489
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYARC + A +FN + D+++W+A+I G ++ G +AL F+ + G K + V
Sbjct: 490 MYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVT 549
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
S+L A + A + G IH VI+ G V++ LV+MYS CG + QVF+ M+
Sbjct: 550 YTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMT 609
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+R+I+ YN++I G H +A + F + E+GL PD+ T+ +L AC + G + +E
Sbjct: 610 QRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKE 669
Query: 429 IFT 431
I +
Sbjct: 670 IHS 672
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 215/442 (48%), Gaps = 3/442 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT--PQRSVFLWNSIIRAYA 80
+E+H + + + D + L+ +Y + AR +++K +R+V WN+++ Y
Sbjct: 161 REVHEHIIQHCTVLDQYTVNALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYV 220
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+A L + + + L T + +C S L R +H A+ + L D
Sbjct: 221 QYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVN 280
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++ ++ Y+K I EA +VFD + +V +I G+A CG + + ++F M + G
Sbjct: 281 VANCILNMYAKCGSIHEAREVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEG 340
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+ T + +++ P+ L G+ +H L + +S V + LV MYA+C
Sbjct: 341 VVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCR 400
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF L + DL+ W+ +I G ++ G++ +A + ++ +G + + +L A
Sbjct: 401 QVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPT 460
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G IH V++ GF + V +AL+ MY++CG + +F M ++II++ ++I
Sbjct: 461 ALHWGREIHSRVVKDGFMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIG 520
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
GL G +A F+D+ + GL P+ T++++L AC ++ GR I ++ E G+
Sbjct: 521 GLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEA-GLA 579
Query: 441 AKTEHYIYMVKLLGLAGNLEEA 462
+V + + G++++A
Sbjct: 580 TDAHVANTLVNMYSMCGSVKDA 601
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 182/351 (51%), Gaps = 2/351 (0%)
Query: 88 AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVT 147
A + + L + + ++ Y + + C E DL R VH I D T +AL+
Sbjct: 125 AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALIN 184
Query: 148 AYSKLSLIDEAIKVFDGVSDPDLVL--CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDE 205
Y + I+EA +V++ ++ + + N+M+ G+ G+ +++L+L M + G
Sbjct: 185 MYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGR 244
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
T + L+S PS L G+ IH +K+ V++ +++MYA+C ++ A VF+
Sbjct: 245 ATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVFDK 304
Query: 266 LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG 325
+ +V+W+ +I GY+ G A F+K+ +G + + +VL A + A + G
Sbjct: 305 METKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWG 364
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
+H +++ G E + V +ALV MY+KCG QVFE + R++I +N++I GL
Sbjct: 365 KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEG 424
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
G +A E + + +G+ P++ T+ LL AC + ++ GREI +R+ ++
Sbjct: 425 GNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKD 475
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 113/232 (48%), Gaps = 2/232 (0%)
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
D+++ + ++ + G + + ++ E L G+ +H ++ Y + L
Sbjct: 123 DRAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNAL 182
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLV--TWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
++MY +C + A V+N L H + +W+A++ GY Q G +AL R++ G
Sbjct: 183 INMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLAL 242
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+L++ + + G IH ++ V V++ +++MY+KCG + +VF
Sbjct: 243 GRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAREVF 302
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ M ++++++ +I G G + AFE F+ + ++G+ P+ T+ +L A
Sbjct: 303 DKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNA 354
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 73/143 (51%), Gaps = 2/143 (1%)
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+A+ + L QG + + +L + ++ G +H ++IQH L +AL+
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183
Query: 349 DMYSKCGYLGLGIQVFETM--SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
+MY +CG + QV+ + +ER + ++N++++G +G+ +A + R++ + GL
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243
Query: 407 ESTFSALLCACCHGGLVNDGREI 429
+T LL +C + GREI
Sbjct: 244 RATTMRLLSSCKSPSALECGREI 266
>gi|297831842|ref|XP_002883803.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329643|gb|EFH60062.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 697
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 189/594 (31%), Positives = 291/594 (48%), Gaps = 69/594 (11%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA V K+ + F +L+ YA L R LFDK PQR+VF WNS++
Sbjct: 42 VHASVIKSGFSNEVFIQNRLIDAYAKCGSLEDGRQLFDKMPQRNVFTWNSVVTGLTKLGF 101
Query: 85 FNDAKSLFKNL-LRTQLK------------------------------PDNFTYACITRA 113
++A SLF+++ R Q + +T+A A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALYYFAMMHKEGFVLNEYTFASGLSA 161
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
CS +D+ +H S D SALV YSK +++A +VFD + D ++V
Sbjct: 162 CSGLNDMNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSW 221
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
NS+I+ + G ++L++F ML PDE TL +IS S + VGQ +H +K
Sbjct: 222 NSLITCYEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVK 281
Query: 234 SSFDSYDYV-SSVLVSMYARCNCMNSAYHVFNSL-------------------------- 266
D + S+ V MYA+C+ + A +F+S+
Sbjct: 282 MDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARL 341
Query: 267 -----FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
++V+W+ALI GY+Q G+ +AL F L + A++L A A A+
Sbjct: 342 MFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLAD 401
Query: 322 VWPGAVIHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ G H +V++HGF E + V ++L+DMY KCG + G VF M ER+ +++
Sbjct: 402 LHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSW 461
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N++I+G +G+ +A E FR++++ G PD T +L AC H G V +GR F+ MT
Sbjct: 462 NAMIIGFAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTR 521
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
++G+ +HY MV LLG AG LEEA S I +P D + G+LL+ C ++ N L +
Sbjct: 522 DFGVAPLRDHYTCMVDLLGRAGFLEEAKSIIEEMPVQPDSVIWGSLLAACKVHRNITLGK 581
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
VA +LFE + V+LSN YAE G+W D M +R + G+ K+ G SW+
Sbjct: 582 YVAEKLFEVETSNSGPYVLLSNMYAELGKWGDAMNVRKLMRKEGVTKQPGCSWI 635
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 190/404 (47%), Gaps = 47/404 (11%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
++R ++H+L+AK+ L D + + LV +Y+ + A+ +FD+ R+V WNS+I
Sbjct: 168 MNRGVQIHSLIAKSPCLSDVYIGSALVDMYSKCGNVNDAQQVFDEMGDRNVVSWNSLITC 227
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI-VSGLGR 137
Y +A +F+ +L + ++PD T A + AC+ S + + VH + + L
Sbjct: 228 YEQNGPAVEALKVFQVMLESWVEPDEVTLASVISACASLSAIKVGQEVHARVVKMDKLRN 287
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDG-------------------------------VS 166
D I S+A V Y+K S I EA +FD ++
Sbjct: 288 DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMVSGYAMAASTKAARLMFTKMA 347
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ ++V N++I+G+ G +++L LF + R P YT ++ + + L +G
Sbjct: 348 ERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYTFANILKACADLADLHLGMQ 407
Query: 227 I------HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
HGF +S + +V + L+ MY +C C+ Y VF + D V+W+A+I G
Sbjct: 408 AHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIG 467
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY-VIQHGFEL 339
++Q G +AL FR++ G+K D + + VL+A + V G H + + F +
Sbjct: 468 FAQNGYGNEALELFREMLDSGEKPDHITMIGVLSACGHAGFVEEGR--HYFSSMTRDFGV 525
Query: 340 SVMVS--SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ + + +VD+ + G+L + E M + +SVI G
Sbjct: 526 APLRDHYTCMVDLLGRAGFLEEAKSIIEEMP----VQPDSVIWG 565
>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
Length = 784
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 289/542 (53%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ +++ +++HA+V + +D F A LV +Y + A ++F+K P
Sbjct: 115 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 174
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I L + A L + + L P+ F + I +AC+ R +HG
Sbjct: 175 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 234
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D LV Y+K +D+A+KVFD +S DL+L N++ISG +H G D+
Sbjct: 235 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 294
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +F + + G + TL ++ S + +H K F +V + L+
Sbjct: 295 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 354
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPV 307
Y +C+C++ A VF D++ +++IT SQ D+G+ A+ F ++ +G + DP
Sbjct: 355 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ-CDHGEGAIKLFMEMLRKGLEPDPF 413
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+++S+L A A + G +H ++I+ F +ALV Y+KCG + F ++
Sbjct: 414 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 473
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ER +++++++I GL HG +A E F ++++G+NP+ T +++LCAC H GLV++ +
Sbjct: 474 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 533
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M E +GI EHY M+ LLG AG L++A + S+P + +V GALL +
Sbjct: 534 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 593
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + +L ++ A +LF +P K V+L+NTYA G W++V K+R + D+ ++KE +S
Sbjct: 594 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 653
Query: 548 WV 549
WV
Sbjct: 654 WV 655
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 221/451 (49%), Gaps = 6/451 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT-PQRSVFLWNSIIRAYALA 82
++HA+ D F A LV +Y + AR +FD+ +R+ WN ++ AY
Sbjct: 28 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 87
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ DA +F ++ + ++P F ++C+ AC+ + ++ R VH + G +D T+
Sbjct: 88 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 147
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y K+ +D A +F+ + D D+V N++ISG G ++++L M G
Sbjct: 148 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 207
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ + L ++ +G+ IHGF +K++ DS DY+ LV MYA+ + ++ A V
Sbjct: 208 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 267
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + H DL+ W+ALI+G S G + +A F L +G + +A+VL + A
Sbjct: 268 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 327
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
+H + GF V + L+D Y KC L I+VFE S +II S+I L
Sbjct: 328 SATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 387
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
A + F +++ KGL PD S+LL AC G+++ + + Q
Sbjct: 388 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFM 444
Query: 443 TEHYI--YMVKLLGLAGNLEEAYSFIWSLPK 471
++ + +V G++E+A SLP+
Sbjct: 445 SDAFAGNALVYTYAKCGSIEDAELAFSSLPE 475
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 4/226 (1%)
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGY 281
+G +H + + F S +V++ LV+MY M+ A VF+ + V+W+ L++ Y
Sbjct: 25 LGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAY 84
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
+ G A+ F ++ G + + V+ A S N+ G +H V++ G+E V
Sbjct: 85 VKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDV 144
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
++ALVDMY K G + + +FE M + +++++N++I G L+G ++A E +
Sbjct: 145 FTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSS 204
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
GL P+ S++L AC G + GR+I M + A ++ YI
Sbjct: 205 GLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKA---NADSDDYI 247
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLG 383
GA +H + GF V V++ALV MY G++ +VF E SERN +++N ++
Sbjct: 26 GAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYV 85
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+ A + F +++ G+ P E FS ++ AC ++ GR++ M G +
Sbjct: 86 KNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHA-MVVRMGYEKDV 144
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+V + G ++ A +P D AL+S C + G+ A
Sbjct: 145 FTANALVDMYVKMGRVDIASVIFEKMPDS-DVVSWNALISGCVLNGHDHRA 194
>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Brachypodium distachyon]
Length = 870
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 169/533 (31%), Positives = 279/533 (52%), Gaps = 1/533 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ + +H L+ K L+ YA +N A ++FD P R V WNS+I
Sbjct: 211 SIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMIS 270
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
++ A LF + + D+ T + AC+E L R VHG ++ +G
Sbjct: 271 GCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFIS 330
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ ++ L+ YS S K+F + ++V +MI+ + G +DK LF M
Sbjct: 331 QTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMG 390
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G PD + + + LL G+ +HG+ +++ + V++ L+ MY +C M
Sbjct: 391 LEGTRPDIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNME 450
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ + D+++W+ LI GYS+ +A F ++ +Q + + V + +L AAA
Sbjct: 451 EAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAA 509
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+++ G +H Y ++ G+ V++AL+DMY KCG L L ++F+ +S +N+I++
Sbjct: 510 SLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISWTI 569
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
++ G G+HG A F + G+ PD ++FSA+L AC H GL ++G F M +E+
Sbjct: 570 MVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRKEH 629
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I+ + +HY MV LL GNL+EAY FI S+P D ++ +LL C I+ N LAE V
Sbjct: 630 KIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAEEV 689
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A ++FE +P Y V+L+N YAE RW+ V KL++ I GLR+ G SW+
Sbjct: 690 AERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIE 742
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 132/425 (31%), Positives = 230/425 (54%), Gaps = 5/425 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPF---YATKLVRLYALNNVLPSARILFDKTP 65
VL+L +SL K H LV +SL RD KLV +Y L +AR +FD+ P
Sbjct: 97 VLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEMP 156
Query: 66 QRS-VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
Q S V +W +++ YA A + LF+ + ++PD +T +C+ + + +
Sbjct: 157 QVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDGE 216
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VHG G G +AL+ Y+K + +AI VFDG+ D++ NSMISG G
Sbjct: 217 VVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMISGCTSNG 276
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+DK+++LF M G+ D TL+ ++ E LL +G+ +HG+ +K+ F S +++
Sbjct: 277 LYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTSLAN 336
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
VL+ MY+ C+ S +F ++ ++V+W+A+IT Y++ G Y K F+++ ++G +
Sbjct: 337 VLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEMGLEGTRP 396
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D I S L A A + + G +HGY I++G E + V++AL++MY KCG + +F
Sbjct: 397 DIFAITSALHAFAGNELLKHGKSVHGYAIRNGMEKVLAVTNALMEMYVKCGNMEEAKLIF 456
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ + +++I++N++I G + +AF F +++ + L P+ T + +L A +
Sbjct: 457 DGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEMLLQ-LRPNAVTMTCILPAAASLSSLE 515
Query: 425 DGREI 429
GRE+
Sbjct: 516 RGREM 520
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 184/368 (50%), Gaps = 13/368 (3%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR---DSITSSALVTAYSKLSLIDEAI 159
D+ +Y + + CSE L G + H S LGR D++ LV Y K ++ A
Sbjct: 90 DDRSYGAVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENAR 149
Query: 160 KVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+VFD + D+ + +++SG+A G + + LF M G PD YT+ ++ +
Sbjct: 150 RVFDEMPQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGL 209
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+ G+ +HG K F S V + L++ YA+ N A VF+ + H D+++W+++I
Sbjct: 210 GSIEDGEVVHGLLEKLGFGSQCAVGNALMAFYAKSNRTKDAILVFDGMPHRDVISWNSMI 269
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+G + G Y KA+ F ++ ++G++ D + SVL A A+ ++ G V+HGY ++ GF
Sbjct: 270 SGCTSNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFI 329
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+++ L+DMYS C ++F M ++N++++ ++I G + F+++
Sbjct: 330 SQTSLANVLLDMYSNCSDWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVAGLFQEM 389
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI----YMVKLLG 454
+G PD ++ L A L+ G+ + Y I+ E + ++++
Sbjct: 390 GLEGTRPDIFAITSALHAFAGNELLKHGKSVHG-----YAIRNGMEKVLAVTNALMEMYV 444
Query: 455 LAGNLEEA 462
GN+EEA
Sbjct: 445 KCGNMEEA 452
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S SL R +E+HA + L D F A L+ +Y L AR LFD+ ++
Sbjct: 504 ILPAAASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKN 563
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
+ W ++ Y + R DA +LF+ + + + PD +++ I ACS + GLR
Sbjct: 564 LISWTIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHS----GLR 615
>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
Length = 865
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/548 (32%), Positives = 284/548 (51%), Gaps = 7/548 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L + L + +H K L D F + LV +Y+ + AR+LFD +R
Sbjct: 189 VLKLCLNSGCLWAAEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERD 248
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC--SENSDLPGLRFV 126
V LWN +++ Y +A LF R+ L+PD F+ I C + DL + V
Sbjct: 249 VVLWNMMLKGYVQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQV 308
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG A+ SGL D +++LV YSK+ A +VF+ + DL+ NSMIS A
Sbjct: 309 HGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLE 368
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS-----LLSVGQGIHGFCLKSSFDSYDY 241
++S+ LF +L G PD +TL + + LL G+ IH +K+ FDS +
Sbjct: 369 EESVNLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH 428
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V+S ++ MY +C M +A VFN + PD V W+++I+G G+ +AL + ++
Sbjct: 429 VNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSR 488
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D A+++ A++ + G +H VI+ V ++LVDMY+KCG +
Sbjct: 489 VMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAY 548
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
++F+ M+ RNI +N++++GL HG +A F+ + G+ PD +F +L AC H G
Sbjct: 549 RLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAG 608
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
L ++ E M +YGI+ + EHY +V LG AG ++EA I ++P +++ AL
Sbjct: 609 LTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRAL 668
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L C I G+ + + VA +LF +P A V+LSN YA RWDDV R + ++
Sbjct: 669 LGACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVK 728
Query: 542 KEAGVSWV 549
K+ G SW+
Sbjct: 729 KDPGFSWI 736
Score = 202 bits (515), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 153/501 (30%), Positives = 255/501 (50%), Gaps = 20/501 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S +L K HA + + D F + L+ +Y+ L SAR +FD TP+R
Sbjct: 83 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 142
Query: 69 VFLWNSIIRAYALAHRFNDAKS-----LFKNLLRTQL-KPDNFTYACITRACSENSDLPG 122
+ WN+I+ AYA + ND + LF+ LLR L T A + + C + L
Sbjct: 143 LVTWNAILGAYAASVDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLWA 201
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VHG AI GL D S ALV YSK + +A +FD + + D+VL N M+ G+
Sbjct: 202 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 261
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG-LWEPS-LLSVGQGIHGFCLKSSFDSYD 240
G ++ QLF R G PDE+++ +++G LW + L +G+ +HG +KS DS
Sbjct: 262 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSGLDSDV 321
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V++ LV+MY++ C A VFN + H DL++W+++I+ +Q +++ F L +
Sbjct: 322 SVANSLVNMYSKMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHE 381
Query: 301 GKKADPVLIASV-LAAAAKSANVW----PGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
G K D +AS+ LA AAK+ G IH + I+ GF+ + V+S ++DMY KCG
Sbjct: 382 GLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCG 441
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ VF +S + + + S+I G +G QA + + + + PDE TF+ L+
Sbjct: 442 DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIK 501
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYSFIWSLPKPV 473
A + GR++ + + + ++ ++ +V + GN+E+AY +
Sbjct: 502 ASSCVTALEQGRQLHANVIK---LDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVR 557
Query: 474 DPAVSGALLSCCHIYGNSDLA 494
+ A+ A+L +GN++ A
Sbjct: 558 NIALWNAMLVGLAQHGNAEEA 578
>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g09040, mitochondrial; Flags: Precursor
gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1028
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 177/550 (32%), Positives = 285/550 (51%), Gaps = 5/550 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F L+ + SH L + H+++ K L ++ F LV +YA L AR +F+
Sbjct: 429 FTFTSLLSTCAASHD-LEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFE 487
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ R WN+II +Y ++A LFK + + D A +AC+ L
Sbjct: 488 RMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQ 547
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ VH ++ GL RD T S+L+ YSK +I +A KVF + + +V N++I+G++
Sbjct: 548 GKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ 607
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY-DY 241
++++ LF ML G P E T ++ +P L++G HG K F S +Y
Sbjct: 608 NNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEY 666
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPD-LVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+ L+ MY M A +F+ L P +V W+ +++G+SQ G Y +AL +++++
Sbjct: 667 LGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G D +VL + +++ G IH + +L + S+ L+DMY+KCG +
Sbjct: 727 GVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGS 786
Query: 361 IQVFETMSER-NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
QVF+ M R N++++NS+I G +G+ A + F + + + PDE TF +L AC H
Sbjct: 787 SQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSH 846
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
G V+DGR+IF M +YGI+A+ +H MV LLG G L+EA FI + D +
Sbjct: 847 AGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWS 906
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
+LL C I+G+ EI A +L E +P+ + V+LSN YA G W+ LR + D G
Sbjct: 907 SLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRG 966
Query: 540 LRKEAGVSWV 549
++K G SW+
Sbjct: 967 VKKVPGYSWI 976
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 205/422 (48%), Gaps = 7/422 (1%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L AR+LF + V WN +I + A F N+ ++ +K T + A
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
++L VH AI GL + S+LV+ YSK ++ A KVF+ + + + V
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFW 396
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+MI G+AH G K ++LF M G D++T L+S L +G H +K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK 456
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+V + LV MYA+C + A +F + D VTW+ +I Y Q + +A
Sbjct: 457 KKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDL 516
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F+++N+ G +D +AS L A ++ G +H ++ G + + S+L+DMYSK
Sbjct: 517 FKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSK 576
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + +VF ++ E ++++ N++I G + +A F++++ +G+NP E TF+ +
Sbjct: 577 CGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTRGVNPSEITFATI 635
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN---LEEAYSFIWSLP 470
+ AC + G + ++T+ G ++ E+ + LLG+ N + EA + L
Sbjct: 636 VEACHKPESLTLGTQFHGQITKR-GFSSEGEY--LGISLLGMYMNSRGMTEACALFSELS 692
Query: 471 KP 472
P
Sbjct: 693 SP 694
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 126/494 (25%), Positives = 221/494 (44%), Gaps = 68/494 (13%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
+V LYA + A FD ++ V WNS++ Y+ + F +L Q+ P+
Sbjct: 101 IVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPN 159
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FT++ + C+ +++ R +H I GL R+S ALV Y+K I +A +VF+
Sbjct: 160 KFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFE 219
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-------------------LRLGK--- 201
+ DP+ V + SG+ G ++++ +F+ M +RLGK
Sbjct: 220 WIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKD 279
Query: 202 ---------TPD---------------------EY--------------TLVGLISGLWE 217
+PD EY TL ++S +
Sbjct: 280 ARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGI 339
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
+ L +G +H +K S YV S LVSMY++C M +A VF +L + V W+A+
Sbjct: 340 VANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAM 399
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I GY+ G+ K + F + G D S+L+ A S ++ G+ H +I+
Sbjct: 400 IRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKL 459
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
++ V +ALVDMY+KCG L Q+FE M +R+ +T+N++I +AF+ F+
Sbjct: 460 AKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKR 519
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ G+ D + ++ L AC H + G+++ ++ + G+ ++ + G
Sbjct: 520 MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC-LSVKCGLDRDLHTGSSLIDMYSKCG 578
Query: 458 NLEEAYSFIWSLPK 471
+++A SLP+
Sbjct: 579 IIKDARKVFSSLPE 592
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 193/409 (47%), Gaps = 3/409 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K L + + + LV +Y+ + +A +F+ +++ WN++IR YA
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ LF ++ + D+FT+ + C+ + DL H I L ++ +A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K +++A ++F+ + D D V N++I + ++ LF M G D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
L + L G+ +H +K D + S L+ MY++C + A VF+
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
SL +V+ +ALI GYSQ + +A+ F+++ +G + A+++ A K ++
Sbjct: 589 SLPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 325 GAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGL 382
G HG + + GF + +L+ MY + +F E S ++I+ + ++ G
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+GF +A +F++++ G+ PD++TF +L C + +GR I +
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHS 756
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 129/293 (44%), Gaps = 36/293 (12%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ VH +++ G+ + +A+V Y+K + + A K FD + + D+ NSM+S ++
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSI 138
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G K L+ F + P+++T ++S + + G+ IH +K + Y
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
LV MYA+C+ ++ A VF + P+ V W+ L +GY + G +A+ F ++ +G +
Sbjct: 199 GALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR 258
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D + +V ++ Y + G L +
Sbjct: 259 PDHLAFVTV-----------------------------------INTYIRLGKLKDARLL 283
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
F MS +++ +N +I G G G A E+F ++ + + ST ++L A
Sbjct: 284 FGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 124/280 (44%), Gaps = 9/280 (3%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +G+ +H L DS + + +V +YA+C ++ A F+ L D+ W+++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
YS G GK L F L + + VL+ A+ NV G IH +I+ G E +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
ALVDMY+KC + +VFE + + N + + + G G +A F + +
Sbjct: 195 SYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRD 254
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+G PD F ++ G + D R +F M+ + + M+ G G
Sbjct: 255 EGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVA-----WNVMISGHGKRGCET 309
Query: 461 EAYSFIWSLPKPVDPAVS---GALLSCCHIYGNSDLAEIV 497
A + +++ K + G++LS I N DL +V
Sbjct: 310 VAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVV 349
>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
Length = 746
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 181/544 (33%), Positives = 282/544 (51%), Gaps = 3/544 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYAT-KLVRLYALNNVLPSARILFDKTP 65
F L ++ + +LHA + LL +A+ LV Y + A +FD+ P
Sbjct: 70 FTFPPLVRAAPGPASAAQLHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMP 129
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R V WN+++ R DA +L ++ + D T + + C D
Sbjct: 130 ERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDRALALV 189
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H A+ GL + +AL+ Y KL ++ EA VF G++ DLV NS+IS G
Sbjct: 190 MHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSIISANEQGGK 249
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-S 244
+++LF M+ G PD TLV L S + + + +H + + +D D ++ +
Sbjct: 250 VAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGN 309
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGKK 303
+V MYA+ + +++A VF++L D+V+W+ LITGY Q G +A+ + + N +G K
Sbjct: 310 AMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDMHNHEGLK 369
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
SVL A + + G +H I+ G L V V++ L+D+Y+KCG L + +
Sbjct: 370 PIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFL 429
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
FE M R+ +N++I GLG+HG +A F + ++ + PD TF +LL AC H GLV
Sbjct: 430 FEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLV 489
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+ GR F M YGI +HY MV +LG AG L+EA+ FI S+P D AV GALL
Sbjct: 490 DQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLG 549
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+GN ++ ++ + LFE DP Y V++SN YA+ G+WD V +R + L+K
Sbjct: 550 ACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKT 609
Query: 544 AGVS 547
G S
Sbjct: 610 PGWS 613
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 179/375 (47%), Gaps = 7/375 (1%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI-TSSALVTAYSKLSLIDEA 158
L+PD+FT+ + RA + L H A+ GL ++ S +LV AY + + EA
Sbjct: 65 LRPDSFTFPPLVRAAPGPASAAQL---HACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+VFD + + D+ N+M+SG ++ L M+ G D TL ++
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
++ +H + +K +V + L+ +Y + + A+ VF + DLVTW+++I
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMALRDLVTWNSII 241
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+ Q G A+ F + G D + + S+ +A A+ + +H YV + G++
Sbjct: 242 SANEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWD 301
Query: 339 LS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ ++ +A+VDMY+K + +VF+ + +R+++++N++I G +G +A + D
Sbjct: 302 VGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYND 361
Query: 398 II-EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+ +GL P + TF ++L A + G + G + ++ + G+ ++ L
Sbjct: 362 MHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHA-LSIKTGLNLDVYVTTCLIDLYAKC 420
Query: 457 GNLEEAYSFIWSLPK 471
G L EA +P+
Sbjct: 421 GKLVEAMFLFEHMPR 435
>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
Length = 938
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/559 (30%), Positives = 288/559 (51%), Gaps = 33/559 (5%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H L+ K +D F LV YA L SAR +FD+ +R+V W S+I YA
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRD 214
Query: 84 RFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
DA LF ++R ++ P++ T C+ AC++ DL V+ SG+ + +
Sbjct: 215 FAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K + ID A ++FD +L LCN+M S + G ++L +F+ M+ G
Sbjct: 275 SALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR 334
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +++ IS + + G+ HG+ L++ F+S+D + + L+ MY +C+ ++A+ +
Sbjct: 335 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL------------------------- 297
F+ + + +VTW++++ GY + G+ A F +
Sbjct: 395 FDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAI 454
Query: 298 -------NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
+ +G AD V + S+ +A + I+ Y+ ++G +L V + + LVDM
Sbjct: 455 EVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDM 514
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
+S+CG + +F +++ R++ + + I + + G +A E F D+IE+GL PD F
Sbjct: 515 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAF 574
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
L AC HGGLV G+EIF M + +G+ + HY MV LLG AG LEEA I +P
Sbjct: 575 VGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMP 634
Query: 471 KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMK 530
+ + +LL+ C + GN ++A A ++ P + V+LSN YA GRW+D+ K
Sbjct: 635 MEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 694
Query: 531 LRDDIVDNGLRKEAGVSWV 549
+R + + GLRK G S +
Sbjct: 695 VRLSMKEKGLRKPPGTSSI 713
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 144/544 (26%), Positives = 261/544 (47%), Gaps = 16/544 (2%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRL---YALNNVLPSARILFDKTPQR-SV 69
K+ +++ K H + K L D TKLV L A+ +F+ + +
Sbjct: 40 KNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTC 99
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
F++NS+IR YA + N+A LF ++ + + PD +T+ AC+++ +HG
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ G +D ++LV Y++ +D A KVFD +S+ ++V SMI G+A F +
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 190 LQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ LF M+R + TP+ T+V +IS + L G+ ++ F S + D + S LV
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +CN ++ A +F+ +L +A+ + Y +QG +AL F + G + D +
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ S +++ ++ N+ G HGYV+++GFE + +AL+DMY KC ++F+ MS
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 399
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ ++T+NS++ G +G A+E F + EK + + S L+ G L + E
Sbjct: 400 NKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLV----QGSLFEEAIE 455
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA---YSFIWSLPKPVDPAVSGALLSCC 485
+F M + G+ A + + G G L+ A Y +I +D + L+
Sbjct: 456 VFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMF 515
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
G+ + A + + L D + R ++L DD+++ GL+ + G
Sbjct: 516 SRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAER---AIELFDDMIEQGLKPD-G 571
Query: 546 VSWV 549
V++V
Sbjct: 572 VAFV 575
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 172/404 (42%), Gaps = 34/404 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L ++++A + + + + + LV +Y N + A+ LFD+ ++ L N++
Sbjct: 250 EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMA 309
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y +A +F ++ + ++PD + +CS+ ++ + HG + +G
Sbjct: 310 SNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFE 369
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+AL+ Y K D A ++FD +S+ +V NS+++G+ G D + + F+ M
Sbjct: 370 SWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETM 429
Query: 197 L--------------------------------RLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ G D T++ + S L +
Sbjct: 430 PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLA 489
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ I+ + K+ + + LV M++RC SA +FNSL + D+ W+A I +
Sbjct: 490 KWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMA 549
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMV 343
G+ +A+ F + QG K D V L A + V G I +++ HG +
Sbjct: 550 GNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVH 609
Query: 344 SSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHG 386
+VD+ + G L +Q+ E M E N + +NS++ + G
Sbjct: 610 YGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQG 653
>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 877
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 289/542 (53%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ +++ +++HA+V + +D F A LV +Y + A ++F+K P
Sbjct: 208 VVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSD 267
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I L + A L + + L P+ F + I +AC+ R +HG
Sbjct: 268 VVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHG 327
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D LV Y+K +D+A+KVFD +S DL+L N++ISG +H G D+
Sbjct: 328 FMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLILWNALISGCSHGGRHDE 387
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +F + + G + TL ++ S + +H K F +V + L+
Sbjct: 388 AFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLID 447
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPV 307
Y +C+C++ A VF D++ +++IT SQ D+G+ A+ F ++ +G + DP
Sbjct: 448 SYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQ-CDHGEGAIKLFMEMLRKGLEPDPF 506
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+++S+L A A + G +H ++I+ F +ALV Y+KCG + F ++
Sbjct: 507 VLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSL 566
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ER +++++++I GL HG +A E F ++++G+NP+ T +++LCAC H GLV++ +
Sbjct: 567 PERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAK 626
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M E +GI EHY M+ LLG AG L++A + S+P + +V GALL +
Sbjct: 627 RYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRV 686
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + +L ++ A +LF +P K V+L+NTYA G W++V K+R + D+ ++KE +S
Sbjct: 687 HKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMS 746
Query: 548 WV 549
WV
Sbjct: 747 WV 748
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 129/451 (28%), Positives = 221/451 (49%), Gaps = 6/451 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT-PQRSVFLWNSIIRAYALA 82
++HA+ D F A LV +Y + AR +FD+ +R+ WN ++ AY
Sbjct: 121 QVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKN 180
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ DA +F ++ + ++P F ++C+ AC+ + ++ R VH + G +D T+
Sbjct: 181 DQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTA 240
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y K+ +D A +F+ + D D+V N++ISG G ++++L M G
Sbjct: 241 NALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLV 300
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ + L ++ +G+ IHGF +K++ DS DY+ LV MYA+ + ++ A V
Sbjct: 301 PNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKV 360
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + H DL+ W+ALI+G S G + +A F L +G + +A+VL + A
Sbjct: 361 FDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAA 420
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
+H + GF V + L+D Y KC L I+VFE S +II S+I L
Sbjct: 421 SATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITAL 480
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
A + F +++ KGL PD S+LL AC G+++ + + Q
Sbjct: 481 SQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR---QFM 537
Query: 443 TEHYI--YMVKLLGLAGNLEEAYSFIWSLPK 471
++ + +V G++E+A SLP+
Sbjct: 538 SDAFAGNALVYTYAKCGSIEDAELAFSSLPE 568
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/406 (25%), Positives = 195/406 (48%), Gaps = 11/406 (2%)
Query: 17 QSLSRTKELHALVA----KASLLRDPFYAT---KLVRLYALNNVLPSARILFDKTPQRSV 69
Q L+R AL+ A+LL+ F A+ L+ Y+ AR +FD+ P
Sbjct: 9 QQLTRYAAAQALLPGAHLHANLLKSGFLASLRNHLISFYSKCRRPCCARRVFDEIPDPCH 68
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
W+S++ AY+ A F + + + F + + C ++ L VH
Sbjct: 69 VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVPDAQLGAQ--VHAM 125
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV-SDPDLVLCNSMISGFAHCGFWDK 188
A+ +G G D ++ALV Y +D+A +VFD S+ + V N ++S +
Sbjct: 126 AMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGD 185
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++Q+F M+ G P E+ +++ + G+ +H ++ ++ + ++ LV
Sbjct: 186 AIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVD 245
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY + ++ A +F + D+V+W+ALI+G G +A+ ++ G + +
Sbjct: 246 MYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFM 305
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
++S+L A A + G IHG++I+ + + LVDMY+K +L ++VF+ MS
Sbjct: 306 LSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS 365
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
R++I +N++I G G +AF F + ++GL + +T +A+L
Sbjct: 366 HRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVL 411
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 169/339 (49%), Gaps = 10/339 (2%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+TR + + LPG +H + SG + + L++ YSK A +VFD + DP
Sbjct: 11 LTRYAAAQALLPGAH-LHANLLKSGFL--ASLRNHLISFYSKCRRPCCARRVFDEIPDPC 67
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
V +S+++ +++ G ++Q F M G +E+ L ++ + + L G +H
Sbjct: 68 HVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL---GAQVHA 124
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYG 288
+ + F S +V++ LV+MY M+ A VF+ + V+W+ L++ Y + G
Sbjct: 125 MAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCG 184
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
A+ F ++ G + + V+ A S N+ G +H V++ G+E V ++ALV
Sbjct: 185 DAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALV 244
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
DMY K G + + +FE M + +++++N++I G L+G ++A E + GL P+
Sbjct: 245 DMYVKMGRVDIASVIFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVF 304
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
S++L AC G + GR+I M + A ++ YI
Sbjct: 305 MLSSILKACAGAGAFDLGRQIHGFMIKA---NADSDDYI 340
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 122/272 (44%), Gaps = 8/272 (2%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G +H LKS F + + L+S Y++C A VF+ + P V+WS+L+T YS
Sbjct: 23 GAHLHANLLKSGF--LASLRNHLISFYSKCRRPCCARRVFDEIPDPCHVSWSSLVTAYSN 80
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G A+ F + +G + + VL + GA +H + GF V V
Sbjct: 81 NGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCV---PDAQLGAQVHAMAMATGFGSDVFV 137
Query: 344 SSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
++ALV MY G++ +VF E SERN +++N ++ + A + F +++ G
Sbjct: 138 ANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSG 197
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ P E FS ++ AC ++ GR++ M G + +V + G ++ A
Sbjct: 198 IQPTEFGFSCVVNACTGSRNIDAGRQVHA-MVVRMGYEKDVFTANALVDMYVKMGRVDIA 256
Query: 463 YSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+P D AL+S C + G+ A
Sbjct: 257 SVIFEKMPDS-DVVSWNALISGCVLNGHDHRA 287
>gi|225469326|ref|XP_002268072.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Vitis vinifera]
Length = 590
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 176/554 (31%), Positives = 296/554 (53%), Gaps = 13/554 (2%)
Query: 5 LHFLVLELSKS---HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
++FL L L S +++ K++HA + + LL D F +K+ + + + F
Sbjct: 1 MYFLKLRLLNSIHRCKTIRSLKQIHAHLIASGLLHDEFVLSKVSEFFGKH--IGFVDYAF 58
Query: 62 DKTPQRSVFL----WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
D Q + + +N++I AYA + A ++ ++ PD +T+ + +AC++
Sbjct: 59 DFLNQTDLHVGTLPYNTLIAAYASSCTPKAAFLVYGRIVGNGFVPDMYTFPVVLKACTKF 118
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
+ VHG A+ G D ++L+ YS A +VFD + D+V +I
Sbjct: 119 LGVQEGEQVHGVAVKMGFLCDLYVQNSLLHFYSVCGKWGGAGRVFDEMLVRDVVSWTGLI 178
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
SG+ G +D+++ LF L++ P+ T V ++ LS+G+G+HG K +F
Sbjct: 179 SGYVRTGLFDEAINLF---LKMDVVPNVATFVSVLVACGRMGYLSMGKGVHGLVYKRAFG 235
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
V + LV MY +C C+ A +F+ L D+V+W+++I+G Q +L F +
Sbjct: 236 IGLVVGNALVDMYVKCECLCEARKLFDELPDRDIVSWTSIISGLVQCKQPKDSLELFYDM 295
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ G + D +++ SVL+A A + G + Y+ + G E + + +ALVDMY+KCG +
Sbjct: 296 QISGVEPDRIILTSVLSACASLGALDYGRWVQEYIERQGIEWDIHIGTALVDMYAKCGCI 355
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ + +F + RNI T+N+++ GL +HG ++A + F +I G+ P+E TF A+L AC
Sbjct: 356 EMALHIFNGIPNRNIFTWNALLGGLAMHGHGHEALKHFELMIGAGIRPNEVTFLAILTAC 415
Query: 418 CHGGLVNDGREIFTRM-TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
CH GLV +GR F +M ++ + + EHY M+ LL AG L+EAY FI ++P P D
Sbjct: 416 CHSGLVAEGRSYFYQMISQPFNFSPRLEHYGCMIDLLCRAGLLDEAYKFIRNMPLPPDVL 475
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
+ GALLS C GN +L++ + L E + V+LSN YA + RWDDV ++R +
Sbjct: 476 IWGALLSACKANGNVELSQEILSHLLELKSQDSGVYVLLSNIYATNERWDDVTRVRRLMK 535
Query: 537 DNGLRKEAGVSWVS 550
D G+RK G S +
Sbjct: 536 DKGIRKFPGSSVIE 549
>gi|255574235|ref|XP_002528032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532562|gb|EEF34350.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 730
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 173/569 (30%), Positives = 297/569 (52%), Gaps = 36/569 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SLS+ K+LH L+ + P KLV Y ++L A + + + WN +I
Sbjct: 107 KSLSQGKQLHTLIISLGFEQHPIIVPKLVTFYTNFDLLADAHTITENSNILHPLPWNLLI 166
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+Y +A S +K + ++PD FTY + +AC E D+ + +H S LG
Sbjct: 167 SSYVRNGLHGEALSAYKQMTHKGIRPDKFTYPSVLKACGEKLDIAFGKKLHASINASCLG 226
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ ++LV+ Y+K + A +F+ + + D V N+MISG+A G W ++ +LF M
Sbjct: 227 WNLFVHNSLVSMYAKTGELSTARCLFENMLERDDVSWNTMISGYASKGMWKEAFELFGKM 286
Query: 197 LRLGKTPDEYT---LVG--LISGLWEPSL------------------------------L 221
G + T + G + SG +E +L +
Sbjct: 287 RVEGIELNIITWNTIAGGCVQSGNFEEALELLSHMRSYGIDMDSVATIIGLGACSHIGAI 346
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+G+ IHG ++S +D D V + L++MY+RC + AY++F S +++TW+++++GY
Sbjct: 347 KLGREIHGSAIRSFYDGVDNVKNALITMYSRCKYLRHAYNLFQSTRTKNIITWNSMLSGY 406
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH-GFELS 340
+ +A + FR++ + G + + V IAS+L A+ AN+ G H Y+++ GF+
Sbjct: 407 THMDRSEEASFLFREMLLSGIEPNYVTIASILPLCARVANLQHGKEFHCYILRRAGFKDY 466
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+++ ++LVDMY++ G + ++F+++S R+ +TY S+I G G+ G +A + F ++ +
Sbjct: 467 LLLWNSLVDMYARSGKVLEAKRLFDSISRRDEVTYTSLIAGYGIQGEGREALKLFDEMKK 526
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+ + PD T A+L AC H GLV +G ++F M YGI + EH+ MV L G AG L
Sbjct: 527 RHIKPDHVTMVAVLSACSHSGLVTEGIKLFELMPSAYGIIPRLEHFACMVDLFGRAGLLH 586
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
+A I +P A+ LL C I+GN+++ E A +L E P Y V+++N YA
Sbjct: 587 KAKEMITRMPYRPSSAMWATLLGACRIHGNAEIGEWAAEKLLEMRPENSGYYVLIANMYA 646
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
G W + K+R + D G+RK G +WV
Sbjct: 647 AAGCWSKLAKVRTYMRDLGVRKAPGCAWV 675
>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1092
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 282/541 (52%), Gaps = 8/541 (1%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ SL K++H V K D F A LV LY+ VL A +F P + V WN
Sbjct: 132 KACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWN 191
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I + A + + +K D T A I C+++ D+ +H +
Sbjct: 192 AMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKH 251
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL D S+AL+ YSK + +A VFD + DLV NS+I+ + +L+ F
Sbjct: 252 GLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFF 311
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYAR 252
M G PD T+V L S + S + + I GF ++ + D V + LV+MYA+
Sbjct: 312 KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK 371
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV----L 308
MN A+ VF+ L D ++W+ L+TGY+Q G +A+ + NM + D +
Sbjct: 372 LGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY---NMMEECRDTIPNQGT 428
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
S++ A + + G IH +I++ L V V++ L+D+Y KCG L + +F +
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ +N++I LG+HG +A + F+D++ + + D TF +LL AC H GLV++G++
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M +EYGI+ +HY MV LLG AG LE+AY + ++P D ++ GALLS C IY
Sbjct: 549 CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIY 608
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN++L + + +L E D Y V+LSN YA +W+ V+K+R D GLRK G S
Sbjct: 609 GNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSS 668
Query: 549 V 549
V
Sbjct: 669 V 669
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 251/494 (50%), Gaps = 17/494 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+++ TK+LHAL+ ++ +TKL+ LY + + +R FD ++++F WNSII
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 78 AYALAHRFNDAKSLFKNLLRT----QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
AY ++++A + L L+PD +T+ I +AC D + VH
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D +++LV YS+ ++D A KVF + D+ N+MISGF G +L +
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
+ M G D T+ ++ + + G IH LK DS +VS+ L++MY++
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ A VF+ + DLV+W+++I Y Q D AL +F+ + + G + D + + S+
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 314 AAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
+ ++ ++ I G+VI+ + V++ +ALV+MY+K GY+ VF+ + ++
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREIFT 431
I++N+++ G +G +A + + + E + P++ T+ +++ A H G + G +I
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYGN 490
++ + + ++ L G G LE+A S + +P+ D +V A+++ I+G
Sbjct: 451 KLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR--DTSVPWNAIIASLGIHGR 507
Query: 491 SDLAEIVAHQLFEN 504
+ A QLF++
Sbjct: 508 GE----EALQLFKD 517
>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 1083
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 182/541 (33%), Positives = 282/541 (52%), Gaps = 8/541 (1%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ SL K++H V K D F A LV LY+ VL A +F P + V WN
Sbjct: 132 KACVSLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWN 191
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I + A + + +K D T A I C+++ D+ +H +
Sbjct: 192 AMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKH 251
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL D S+AL+ YSK + +A VFD + DLV NS+I+ + +L+ F
Sbjct: 252 GLDSDVFVSNALINMYSKFGRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFF 311
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYAR 252
M G PD T+V L S + S + + I GF ++ + D V + LV+MYA+
Sbjct: 312 KGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAK 371
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV----L 308
MN A+ VF+ L D ++W+ L+TGY+Q G +A+ + NM + D +
Sbjct: 372 LGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY---NMMEECRDTIPNQGT 428
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
S++ A + + G IH +I++ L V V++ L+D+Y KCG L + +F +
Sbjct: 429 WVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP 488
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ +N++I LG+HG +A + F+D++ + + D TF +LL AC H GLV++G++
Sbjct: 489 RDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQK 548
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M +EYGI+ +HY MV LLG AG LE+AY + ++P D ++ GALLS C IY
Sbjct: 549 CFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIY 608
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN++L + + +L E D Y V+LSN YA +W+ V+K+R D GLRK G S
Sbjct: 609 GNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSS 668
Query: 549 V 549
V
Sbjct: 669 V 669
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 132/494 (26%), Positives = 251/494 (50%), Gaps = 17/494 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+++ TK+LHAL+ ++ +TKL+ LY + + +R FD ++++F WNSII
Sbjct: 34 NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIIS 93
Query: 78 AYALAHRFNDAKSLFKNLLRT----QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
AY ++++A + L L+PD +T+ I +AC D + VH
Sbjct: 94 AYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKACVSLVD---GKKVHCCVFKM 150
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D +++LV YS+ ++D A KVF + D+ N+MISGF G +L +
Sbjct: 151 GFEDDVFVAASLVHLYSRYGVLDVAHKVFVDMPVKDVGSWNAMISGFCQNGNAAGALGVL 210
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
+ M G D T+ ++ + + G IH LK DS +VS+ L++MY++
Sbjct: 211 NRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVFVSNALINMYSKF 270
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ A VF+ + DLV+W+++I Y Q D AL +F+ + + G + D + + S+
Sbjct: 271 GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLGGIRPDLLTVVSLT 330
Query: 314 AAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
+ ++ ++ I G+VI+ + V++ +ALV+MY+K GY+ VF+ + ++
Sbjct: 331 SIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDT 390
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREIFT 431
I++N+++ G +G +A + + + E + P++ T+ +++ A H G + G +I
Sbjct: 391 ISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHA 450
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYGN 490
++ + + ++ L G G LE+A S + +P+ D +V A+++ I+G
Sbjct: 451 KLIKN-SLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIPR--DTSVPWNAIIASLGIHGR 507
Query: 491 SDLAEIVAHQLFEN 504
+ A QLF++
Sbjct: 508 GE----EALQLFKD 517
>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
Length = 1091
Score = 295 bits (756), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 160/506 (31%), Positives = 277/506 (54%), Gaps = 1/506 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ YA +N++ A ++F++ P++ WNS+I + ++A LF + + D
Sbjct: 458 LISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELD 517
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
+ T + AC+++ R VHG ++ +GL ++ ++AL+ YS S ++F
Sbjct: 518 SVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFR 577
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ ++V +MI+ + G +DK L M+ G PD + + + L
Sbjct: 578 SMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQ 637
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +HG+ +++ + V++ L+ MY +C + A +F+ + + D+++W+ LI GYS+
Sbjct: 638 GKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSR 697
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
++ F + +Q + + V + +L AAA +++ G IH Y ++ GF
Sbjct: 698 NNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYA 756
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S+ALVDMY KCG L + +F+ ++++N+I++ +I G G+HGF A F + G+
Sbjct: 757 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGI 816
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
PD ++FSA+L ACCH GL +GR F M +EY I+ K +HY +V LL G+L+EA
Sbjct: 817 EPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEAL 876
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDG 523
FI S+P D ++ +LL C I+ N LAE VA ++F+ +P Y V+L+N YAE
Sbjct: 877 EFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPENTGYYVLLANIYAEAE 936
Query: 524 RWDDVMKLRDDIVDNGLRKEAGVSWV 549
RW+ V KL++ I GLR+ G SW+
Sbjct: 937 RWEAVKKLKNKIGGRGLRENTGYSWI 962
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 205/427 (48%), Gaps = 17/427 (3%)
Query: 8 LVLELSKSHQSLSRTKELHALV----AKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
+V++L +SL K HAL+ A A+ + +LV Y L AR +FD
Sbjct: 102 MVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKRLVLAYLKCGDLGEARTVFDG 161
Query: 64 TPQRS--VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
P ++ V +W S++ AYA A F +A SLF+ + + PD +C+ + S L
Sbjct: 162 MPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLT 221
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+HG GLG+ ++AL+ YS+ +++A +VFD + D + NSMI G
Sbjct: 222 EGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCF 281
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS----SFD 237
G+ ++ LF M G T++ ++ +G+ +HG+ +KS D
Sbjct: 282 SNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLD 341
Query: 238 SYD------YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV-TWSALITGYSQQGDYGKA 290
S + S LV MY +C M SA VF+++ V W+ ++ GY++ G++ ++
Sbjct: 342 SVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEES 401
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L F +++ G D I+ +L + G V HGY+++ GF V +AL+
Sbjct: 402 LSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGFGAQCAVCNALISF 461
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
Y+K +G + VF M ++ I++NSVI G +G +A E F + +G D T
Sbjct: 462 YAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIRMWTQGQELDSVTL 521
Query: 411 SALLCAC 417
++L AC
Sbjct: 522 LSVLPAC 528
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 133/467 (28%), Positives = 221/467 (47%), Gaps = 24/467 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S SL+ + +H L+ K L + A L+ +Y+ + A +FD R
Sbjct: 210 VLKCVSSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRD 269
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVH 127
WNS+I A LF + + + T + AC+ L G + VH
Sbjct: 270 AISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIG-KAVH 328
Query: 128 GGAIVSGL--GRDSITS--------SALVTAYSKLSLIDEAIKVFDGVSDPDLV-LCNSM 176
G ++ SGL G DS+ S S LV Y K + A +VFD +S V + N +
Sbjct: 329 GYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLI 388
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
+ G+A G +++SL LF M LG PDE+ + L+ + S G HG+ +K F
Sbjct: 389 MGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGYIVKLGF 448
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+ V + L+S YA+ N + A VFN + D ++W+++I+G S G +A+ F +
Sbjct: 449 GAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSSNGLNSEAIELFIR 508
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ QG++ D V + SVL A A+S + G V+HGY ++ G +++AL+DMYS C
Sbjct: 509 MWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALLDMYSNCSD 568
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
Q+F +M ++N++++ ++I G + ++++ G+ PD ++ L A
Sbjct: 569 WQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDGIRPDVFAVTSALHA 628
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
+ G+ + Y I+ E KLL +A L E Y
Sbjct: 629 FAGDESLKQGKSV-----HGYTIRNGME------KLLPVANALMEMY 664
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 163/347 (46%), Gaps = 24/347 (6%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHG-----GAIVSGLGRDSITSSALVTAYSKLSLIDE 157
D +Y + + C E L + H A +G G+ S+ LV AY K + E
Sbjct: 96 DVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATG-GKGSVLGKRLVLAYLKCGDLGE 154
Query: 158 AIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A VFDG+ D+ + S++S +A G + +++ LF M G +PD + + ++ +
Sbjct: 155 ARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVSPDAHAVSCVLKCV 214
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
L+ G+ IHG K V++ L+++Y+RC M A VF+S+ D ++W+
Sbjct: 215 SSLGSLTEGEVIHGLLEKLGLGQACAVANALIAVYSRCGRMEDAARVFDSMHPRDAISWN 274
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
++I G G +G A+ F K+ QG + V + SVL A A G +HGY ++
Sbjct: 275 SMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKS 334
Query: 336 GFELSV----------MVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSVILGLGL 384
G + + S LV MY KCG + +VF+ MS + N+ +N ++ G
Sbjct: 335 GLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAK 394
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALL-C----ACCHGGLVNDG 426
G ++ F + E G+ PDE S LL C +C GLV G
Sbjct: 395 VGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHG 441
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 184/394 (46%), Gaps = 5/394 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H K L+ + A L+ +Y+ + S +F Q++V W ++I +Y A
Sbjct: 538 RVVHGYSVKTGLIGETSLANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRA 597
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F+ L + ++ ++PD F A + + L + VHG I +G+ + +
Sbjct: 598 GLFDKVAGLLQEMVLDGIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVA 657
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y K ++EA +FD V++ D++ N++I G++ F ++S LF ML L
Sbjct: 658 NALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML-LQFR 716
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T+ ++ S L G+ IH + L+ F Y S+ LV MY +C + A +
Sbjct: 717 PNAVTMTCILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVL 776
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ L +L++W+ +I GY G A+ F ++ G + D +++L A S
Sbjct: 777 FDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLA 836
Query: 323 WPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVIL 380
G ++ E + + +VD+ S+ G L ++ E+M E + + S++
Sbjct: 837 AEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLH 896
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G +H A E D + K L P+ + + LL
Sbjct: 897 GCRIHKNVKLA-EKVADKVFK-LEPENTGYYVLL 928
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 11/270 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL + K +H + + + A L+ +Y + AR++FD+ + V WN++I
Sbjct: 633 ESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLIFDRVTNKDVISWNTLI 692
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + N++ SLF ++L Q +P+ T CI A + S L R +H A+ G
Sbjct: 693 GGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSLERGREIHAYALRRGFL 751
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
DS S+ALV Y K + A +FD ++ +L+ MI+G+ GF ++ LF+ M
Sbjct: 752 EDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGFGKHAIALFEQM 811
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSSVLVSMYA 251
G PD + ++ L + G+ + ++ Y + +V + +
Sbjct: 812 RGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPKLKHY----TCIVDLLS 867
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
R + A S+ PD W +L+ G
Sbjct: 868 RTGDLKEALEFIESMPIEPDSSIWVSLLHG 897
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S SL R +E+HA + L D + + LV +Y L AR+LFD+ +++
Sbjct: 725 ILPAAASISSLERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKN 784
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
+ W +I Y + A +LF+ + + ++PD +++ I AC
Sbjct: 785 LISWTIMIAGYGMHGFGKHAIALFEQMRGSGIEPDAASFSAILYAC 830
>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
Length = 920
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 268/532 (50%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K+LH+ + KA + D L+ LY + +A +F+ + +V LWN ++ A
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + +F + T + P+ FTY CI R C+ + +H +I +G D
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +D+A K+ + + D+V SMI+G+ F +++L F M
Sbjct: 381 MYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L S + G IH S + + + + LV++YARC
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ +F + H D +TW+ LI+G+ Q Y +AL F K+ G K + S ++A A
Sbjct: 501 AFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALAN 560
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A++ G +HG ++ G V++AL+ +Y KCG + +F MS RN +++N++
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + F + ++GL P++ TF +L AC H GLV +G F M+ YG
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
+ +HY +V +LG AG L+ A F+ +P + + LLS C ++ N ++ E+ A
Sbjct: 681 LNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAA 740
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA G+W + ++R + D G+RKE G SW+
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIE 792
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 204/443 (46%), Gaps = 3/443 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA L D L+ LYA N ++ AR +F + R W +++ YA +
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQSG 123
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A L+ + T + P + + + AC++ R +H ++ +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+ Y A +VF + D V N++ISG A CG + +LQ+FD M G P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS-VLVSMYARCNCMNSAYHV 262
D T+ L++ L G+ +H + LK+ S+DY++ L+ +Y +C + +A+ +
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGM-SFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN ++V W+ ++ Y Q D K+ F ++ G + +L + +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQI 362
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH I++GFE + VS L+DMYSK G L ++ E + +R+++++ S+I G
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGY 422
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
H F +A F+++ + G+ PD ++ AC + G +I R+ G A
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAAD 481
Query: 443 TEHYIYMVKLLGLAGNLEEAYSF 465
+ +V L G EEA+S
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSL 504
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 214/456 (46%), Gaps = 5/456 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKT-PQ 66
VL + ++ + +HA V K + + F L+ LY + + R+ D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R F N++I +A A +F + + L+PD T A + AC+ DL + +
Sbjct: 210 RVTF--NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + +G+ D IT +L+ Y K I+ A +F+ ++VL N M+ +
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
KS ++F M G P+++T ++ + +G+ IH +K+ F+S YVS VL
Sbjct: 328 AKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVL 387
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY++ C++ A + L D+V+W+++I GY Q +AL F+++ G D
Sbjct: 388 IDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN 447
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ +AS +A A + G IH V G+ + + + LV++Y++CG +F
Sbjct: 448 IGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFRE 507
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ ++ IT+N +I G G QA F + + G + TF + + A + + G
Sbjct: 508 IEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQG 567
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+++ R + G ++TE ++ L G G++E+A
Sbjct: 568 KQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDA 602
>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
Length = 721
Score = 295 bits (755), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 285/546 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L S + + +H V K + F T L+ Y+++ + AR +FD+ +
Sbjct: 52 VLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKD 111
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W +I +YA F++A F + KP+NFT+A + +AC + + VH
Sbjct: 112 MVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHC 171
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + RD L+ Y++ D+A + F + D++ + MIS FA G +K
Sbjct: 172 SVLKTNYERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEK 231
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L++F M R P+++T ++ + L + + IHG LK+ + +VS+ L++
Sbjct: 232 ALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMA 291
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
YA+C C+ + +F +L + V+W+ +I Y Q GD +AL F + +A V
Sbjct: 292 CYAKCGCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVT 351
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+S+L A A A + G +H + + V V +AL+DMY+KCG + +F+ +
Sbjct: 352 YSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLD 411
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+ +++N++I G +HG +A + F + E PDE TF +L AC + G +++G++
Sbjct: 412 LRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQ 471
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
FT M ++YGI+ EHY MV L+G +GNL++A FI +P + ALL C I+
Sbjct: 472 YFTSMKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIH 531
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ +L I A ++ E +PR A V+LSN YA RW +V +R + G++KE G+SW
Sbjct: 532 NDVELGRISAQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSW 591
Query: 549 VSGSSN 554
+ N
Sbjct: 592 IENQGN 597
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 186/361 (51%), Gaps = 4/361 (1%)
Query: 59 ILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT--QLKPDNFTYACITRACSE 116
++FD+ P+R+ + ++I YA +++F +A LF L +L P FT E
Sbjct: 1 MVFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSME 60
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
++L R VHG + G G ++ +AL+ AYS + A +VFD +S D+V M
Sbjct: 61 WAELG--RIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSMAREVFDEISSKDMVSWTGM 118
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
I+ +A + ++L+ F M G P+ +T G++ G+ +H LK+++
Sbjct: 119 IASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNY 178
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+ YV L+ +Y RC + A+ F + D++ WS +I+ ++Q G KAL F +
Sbjct: 179 ERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFCQ 238
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ + +SVL A+A ++ IHG+ ++ G V VS+AL+ Y+KCG
Sbjct: 239 MRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGC 298
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ +++FE +S+RN +++N++I+ G +A F +++ + E T+S++L A
Sbjct: 299 IEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRA 358
Query: 417 C 417
C
Sbjct: 359 C 359
>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
Length = 723
Score = 295 bits (755), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 275/504 (54%), Gaps = 4/504 (0%)
Query: 51 NNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI 110
N L SA +FD+ P R+V W +I + DA LF +++ + PD FT + +
Sbjct: 92 NGDLESAYKVFDRMPDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGV 151
Query: 111 TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL---SLIDEAIKVFDGVSD 167
AC+E L R H + SGL D +LV Y+K +D+A KVFD +
Sbjct: 152 VSACAEMGLLSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPV 211
Query: 168 PDLVLCNSMISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+++ ++I+G+ G D+ +++LF M++ P+ +T ++ S + +G+
Sbjct: 212 HNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQ 271
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
++ +K S + V + L+SMY+RC M +A F+ LF +LV+++ ++ Y++ +
Sbjct: 272 VYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLN 331
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+A F ++ G + AS+L+ A+ + G IH +++ GF+ ++ + +A
Sbjct: 332 SEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNA 391
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+ MYS+CG + QVF M + N+I++ S+I G HGF +A E F ++E G++P+
Sbjct: 392 LISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPN 451
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
E T+ A+L AC H GL+++G + F M E+GI + EHY +V LLG +G+LEEA +
Sbjct: 452 EVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELV 511
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
S+P D V L C ++GN DL + A + E DP A ++LSN +A G+W+
Sbjct: 512 NSMPFKADALVLRTFLGACRVHGNMDLGKHAAEMILEQDPHDPAAYILLSNLHASAGQWE 571
Query: 527 DVMKLRDDIVDNGLRKEAGVSWVS 550
+V ++R + + L KEAG SW+
Sbjct: 572 EVAEIRKKMKERNLTKEAGCSWIE 595
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/405 (27%), Positives = 205/405 (50%), Gaps = 7/405 (1%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R + W+++I YA + +A S F ++L P+ + + + RACS ++ +
Sbjct: 4 KRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKI 63
Query: 126 VHGGAIVSG-LGRDSITSSALVTAYSKLS-LIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ G + +G D AL+ + K + ++ A KVFD + D ++V MI+ F
Sbjct: 64 IFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRFQQL 123
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
GF ++ LF M+ G PD +TL G++S E LLS+G+ H +KS D V
Sbjct: 124 GFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDVCVG 183
Query: 244 SVLVSMYARC---NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNM 299
LV MYA+C ++ A VF+ + ++++W+A+ITGY Q G + A+ F ++
Sbjct: 184 CSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQ 243
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
K + +SVL A A +++W G ++ V++ V ++L+ MYS+CG +
Sbjct: 244 GQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMEN 303
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+ F+ + E+N+++YN+++ + +AFE F +I G + TF++LL
Sbjct: 304 ARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASS 363
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
G + G +I +R+ + G ++ ++ + GN+E A+
Sbjct: 364 IGAIGKGEQIHSRILKS-GFKSNLHICNALISMYSRCGNIEAAFQ 407
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 186/354 (52%), Gaps = 5/354 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYA---LNNVLPSARILFDKTPQRSVFLWNSI 75
LS ++ H LV K+ L D LV +YA + + AR +FD+ P +V W +I
Sbjct: 161 LSLGRQFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAI 220
Query: 76 IRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
I Y + + +A LF +++ Q+KP++FT++ + +AC+ SD+ V+ +
Sbjct: 221 ITGYVQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMR 280
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L + ++L++ YS+ ++ A K FD + + +LV N++++ +A +++ +LF+
Sbjct: 281 LASINCVGNSLISMYSRCGNMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFN 340
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G + +T L+SG + G+ IH LKS F S ++ + L+SMY+RC
Sbjct: 341 EIEGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCG 400
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ +A+ VFN + ++++W+++ITG+++ G +AL F K+ G + V +VL+
Sbjct: 401 NIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLS 460
Query: 315 AAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
A + + G ++HG + + +VD+ + G+L +++ +M
Sbjct: 461 ACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSM 514
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 110/222 (49%), Gaps = 3/222 (1%)
Query: 6 HFLVLELSKSHQSLSRT---KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
HF + K+ +LS ++++ALV K L L+ +Y+ + +AR FD
Sbjct: 250 HFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGNMENARKAFD 309
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
++++ +N+I+ AYA + +A LF + + FT+A + S +
Sbjct: 310 VLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIGK 369
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+H + SG + +AL++ YS+ I+ A +VF+ + D +++ SMI+GFA
Sbjct: 370 GEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFAK 429
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
GF ++L+ F ML G +P+E T + ++S L+S G
Sbjct: 430 HGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEG 471
>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
Length = 920
Score = 295 bits (754), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 269/532 (50%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K+LH+ + KA + D L+ LY + +A +F+ + +V LWN ++ A
Sbjct: 261 LQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVA 320
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + +F + T + P+ FTY CI R C+ + +H +I +G D
Sbjct: 321 YGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESD 380
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +D+A K+ + + D+V SMI+G+ F +++L F M
Sbjct: 381 MYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQD 440
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L S + G IH S + + + + LV++YARC
Sbjct: 441 CGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEE 500
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ +F + H D +TW+ LI+G+ Q Y +AL F K++ G K + S ++A A
Sbjct: 501 AFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALAN 560
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A++ G +HG ++ G V++AL+ +Y KCG + +F MS RN +++N++
Sbjct: 561 LADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTI 620
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + F + ++GL P++ TF +L AC H GLV +G F M+ YG
Sbjct: 621 ITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYG 680
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
+ +HY +V +LG AG L+ A F+ +P + + LLS C ++ N ++ E+ A
Sbjct: 681 LNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIEIGELAA 740
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA G+W + ++R + D G+RKE G SW+
Sbjct: 741 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIE 792
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/443 (25%), Positives = 202/443 (45%), Gaps = 3/443 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA L D L+ LYA N ++ AR +F + R W +++ YA
Sbjct: 64 EIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKELSSRDHVSWVAMLSGYAQRG 123
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A L+ + T + P + + + AC++ R +H ++ +
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGN 183
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+ Y A +VF + D V N++ISG A CG + +LQ+FD M G P
Sbjct: 184 ALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRP 243
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS-VLVSMYARCNCMNSAYHV 262
D T+ L++ L G+ +H + LK+ S+DY++ L+ +Y +C + +A+ +
Sbjct: 244 DCVTVASLLAACASVGDLQKGKQLHSYLLKAGM-SFDYITEGSLLDLYVKCGDIETAHDI 302
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN ++V W+ ++ Y Q D K+ F ++ G + +L + +
Sbjct: 303 FNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQI 362
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH I++GFE + VS L+DMYSK L ++ E + +R+++++ S+I G
Sbjct: 363 ELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGY 422
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
H F +A F+++ + G+ PD ++ AC + G +I R+ G A
Sbjct: 423 VQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAAD 481
Query: 443 TEHYIYMVKLLGLAGNLEEAYSF 465
+ +V L G EEA+S
Sbjct: 482 ISIWNTLVNLYARCGRSEEAFSL 504
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 214/456 (46%), Gaps = 5/456 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKT-PQ 66
VL + ++ + +HA V K + + F L+ LY + + R+ D
Sbjct: 150 VLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERVFCDMLFCD 209
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R F N++I +A A +F + + L+PD T A + AC+ DL + +
Sbjct: 210 RVTF--NTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQL 267
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + +G+ D IT +L+ Y K I+ A +F+ ++VL N M+ +
Sbjct: 268 HSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDL 327
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
KS ++F M G P+++T ++ + +G+ IH +K+ F+S YVS VL
Sbjct: 328 AKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVL 387
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY++ C++ A + L D+V+W+++I GY Q +AL F+++ G D
Sbjct: 388 IDMYSKYRCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDN 447
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ +AS +A A + G IH V G+ + + + LV++Y++CG +F
Sbjct: 448 IGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFRE 507
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ ++ IT+N +I G G QA F + + G + TF + + A + + G
Sbjct: 508 IDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISAISALANLADIKQG 567
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+++ R + G ++TE ++ L G G++E+A
Sbjct: 568 KQVHGRAVKT-GHTSETEVANALISLYGKCGSIEDA 602
>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
Length = 682
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 285/545 (52%), Gaps = 10/545 (1%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRL-YALNNVLPSARILFDKTPQRSV 69
L + L K +HA + + L D + K++R + N S RIL D+T + ++
Sbjct: 15 RLIQGFSCLKHLKHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRIL-DQTKEPNI 73
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
FL+N++IR L F ++ ++ ++ + L PD+FT+ + +AC+ D +H
Sbjct: 74 FLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSL 133
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ +G D+ +L+ Y+K ID A KVFD + D + + ISG+ G ++
Sbjct: 134 VVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREA 193
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+ +F +L +G PD ++LV ++S L G+ I + ++ +V++ LV
Sbjct: 194 IDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDF 253
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C M A VF+ + ++V+WS++I GY+ G +AL F K+ +G K D +
Sbjct: 254 YGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAM 313
Query: 310 ASVLAAAAKSANV----WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
VL + A+ + W +I+G + F + ++ +AL+DMY+KCG + +VF
Sbjct: 314 VGVLCSCARLGALELGDWASNLING----NEFLDNSVLGTALIDMYAKCGRMDRAWEVFR 369
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M +++ + +N+ I GL + G A F + + G+ PD +TF LLCAC H GLV +
Sbjct: 370 GMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEE 429
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR F M + + + EHY MV LLG AG L+EA+ I S+P + V GALL C
Sbjct: 430 GRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGC 489
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++ ++ L E+V +L +P V+LSN YA +W++ K+R + + G++K G
Sbjct: 490 RLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIRSIMSERGVKKIPG 549
Query: 546 VSWVS 550
SW+
Sbjct: 550 YSWIE 554
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 140/322 (43%), Gaps = 20/322 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL K L + + + + ++R+ F AT LV Y + AR +FD +++
Sbjct: 215 VLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKN 274
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP----GLR 124
+ W+S+I+ YA +A LF +L LKPD + + +C+ L
Sbjct: 275 IVSWSSMIQGYASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASN 334
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
++G + +S+ +AL+ Y+K +D A +VF G+ D V+ N+ ISG A G
Sbjct: 335 LINGNEFLD----NSVLGTALIDMYAKCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSG 390
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-----FCLKSSFDSY 239
+L LF M + G PD T VGL+ L+ G+ F L + Y
Sbjct: 391 HVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHY 450
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+V + R C++ A+ + S+ + + W AL+ G D +KL
Sbjct: 451 ----GCMVDLLGRAGCLDEAHQLIKSMPMEANAIVWGALLGGCRLHRDTQLVEVVLKKLI 506
Query: 299 M--QGKKADPVLIASVLAAAAK 318
+ VL++++ AA+ K
Sbjct: 507 ALEPWHSGNYVLLSNIYAASHK 528
>gi|225425182|ref|XP_002264325.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13600
[Vitis vinifera]
Length = 684
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 293/606 (48%), Gaps = 70/606 (11%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S T+ +HA + + F +L+ +Y + L AR LFD+ PQR+ F WNS+I
Sbjct: 29 RSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLI 88
Query: 77 R-------------------------------AYALAHRFNDAKSLFKNLLRTQLKPDNF 105
+A RF ++ F + R + +
Sbjct: 89 SVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEY 148
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
++ AC+ DL VH S D SAL+ YSK + A +VF G+
Sbjct: 149 SFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM 208
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ +LV NS+I+ + G ++L++F M+ G PDE TL ++S L G
Sbjct: 209 IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGL 268
Query: 226 GIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFN-------------------- 264
IH +K++ D V + LV MYA+C+ +N A VF+
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 265 -----------SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ ++V+W+ALI GY+Q G+ +AL FR L + ++L
Sbjct: 329 ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL 388
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELS------VMVSSALVDMYSKCGYLGLGIQVFETM 367
+A A A++ G H +V++ GFE + V ++L+DMY KCG + G +VFE M
Sbjct: 389 SACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFVGNSLIDMYMKCGSIEDGSRVFEKM 448
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ER+ +++N++I+G +G+ +A + FR ++ G PD T +LCAC H GLV +GR
Sbjct: 449 KERDCVSWNAIIVGYAQNGYGAEALQIFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGR 508
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M EE+G+ +HY MV LLG AG L EA + I ++P D V G+LL+ C +
Sbjct: 509 HYFFSM-EEHGLIPLKDHYTCMVDLLGRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKV 567
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+GN ++ + A +L E DP V+LSN YAE GRW DV+++R + G+ K+ G S
Sbjct: 568 HGNIEMGKHAAEKLLEIDPWNSGPYVLLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCS 627
Query: 548 WVSGSS 553
W+ S
Sbjct: 628 WIEVES 633
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 64/419 (15%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
L+R P++ +A + +C + G R VH +++ + + L+ Y K
Sbjct: 6 LVRDLYLPNSSPFAKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDC 65
Query: 155 IDEAIKVFD-------------------------------GVSDPDLVLCNSMISGFAHC 183
+D+A K+FD + +PD NSM+SGFA
Sbjct: 66 LDDARKLFDRMPQRNTFTWNSLISVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQH 125
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+++SL+ F M R +EY+ +S L++G +H KS + + Y+
Sbjct: 126 DRFEESLEYFVKMHREDFLLNEYSFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMG 185
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
S L+ MY++C + A VF+ + +LVTW++LIT Y Q G +AL F ++ G +
Sbjct: 186 SALIDMYSKCGSVACAEEVFSGMIERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLE 245
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D V +ASV++A A + G IH V++ + F +++ +ALVDMY+KC + +
Sbjct: 246 PDEVTLASVVSACASLCALKEGLQIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARR 305
Query: 363 VFETMS-------------------------------ERNIITYNSVILGLGLHGFTYQA 391
VF+ MS +RN++++N++I G +G +A
Sbjct: 306 VFDRMSIRNVVSETSMVSGYARAASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEA 365
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE-YGIQAKTEHYIYM 449
FR + + + P TF LL AC + + GR+ T + ++ + Q+ E I++
Sbjct: 366 LRLFRLLKRESIWPTHYTFGNLLSACANLADLLLGRQAHTHVLKQGFEFQSGAESDIFV 424
>gi|356501823|ref|XP_003519723.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 727
Score = 294 bits (753), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 162/507 (31%), Positives = 268/507 (52%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
++ ++A + AR +F++ P R + W ++I +A LF+ + L PD
Sbjct: 173 VIDMFAKCGSVEDARRMFEEMPDRDLASWTALICGTMWNGECLEALLLFRKMRSEGLMPD 232
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
+ A I AC + + A+ SG D S+A++ Y K EA +VF
Sbjct: 233 SVIVASILPACGRLEAVKLGMALQVCAVRSGFESDLYVSNAVIDMYCKCGDPLEAHRVFS 292
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D+V +++I+G++ + +S +L+ M+ +G + ++ L + LL
Sbjct: 293 HMVYSDVVSWSTLIAGYSQNCLYQESYKLYIGMINVGLATNAIVATSVLPALGKLELLKQ 352
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +H F LK S V S L+ MYA C + A +F D++ W+++I GY+
Sbjct: 353 GKEMHNFVLKEGLMSDVVVGSALIVMYANCGSIKEAESIFECTSDKDIMVWNSMIVGYNL 412
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
GD+ A + FR++ + + + + S+L + + G IHGYV + G L+V V
Sbjct: 413 VGDFESAFFTFRRIWGAEHRPNFITVVSILPICTQMGALRQGKEIHGYVTKSGLGLNVSV 472
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
++L+DMYSKCG+L LG +VF+ M RN+ TYN++I G HG + F+ + E+G
Sbjct: 473 GNSLIDMYSKCGFLELGEKVFKQMMVRNVTTYNTMISACGSHGQGEKGLAFYEQMKEEGN 532
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
P++ TF +LL AC H GL++ G ++ M +YGI+ EHY MV L+G AG+L+ AY
Sbjct: 533 RPNKVTFISLLSACSHAGLLDRGWLLYNSMINDYGIEPNMEHYSCMVDLIGRAGDLDGAY 592
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDG 523
FI +P D V G+LL C ++ +L E++A ++ + + V+LSN YA
Sbjct: 593 KFITRMPMTPDANVFGSLLGACRLHNKVELTELLAERILQLKADDSGHYVLLSNLYASGK 652
Query: 524 RWDDVMKLRDDIVDNGLRKEAGVSWVS 550
RW+D+ K+R I D GL K+ G SW+
Sbjct: 653 RWEDMSKVRSMIKDKGLEKKPGSSWIQ 679
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 122/439 (27%), Positives = 215/439 (48%), Gaps = 10/439 (2%)
Query: 5 LHFLVLELS--KSHQSLSRTKELHALVA-----KASLLRDPFYATKLVRLYALNNVLPSA 57
+HF V KS +L + LHAL+ + + +A++LV +Y L A
Sbjct: 27 IHFTVTSFHRLKSPPNLHEARTLHALLLVLGFFQPTCPHSSSFASQLVNVYVNFGSLQHA 86
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+ F P + + WN+I+R F A + ++L+ + PDN+TY + +ACS
Sbjct: 87 FLTFRALPHKPIIAWNAILRGLVAVGHFTKAIHFYHSMLQHGVTPDNYTYPLVLKACSSL 146
Query: 118 SDLPGLRFVHGGAIVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
L R+VH + G + ++ A++ ++K +++A ++F+ + D DL ++
Sbjct: 147 HALQLGRWVH--ETMHGKTKANVYVQCAVIDMFAKCGSVEDARRMFEEMPDRDLASWTAL 204
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
I G G ++L LF M G PD + ++ + +G + ++S F
Sbjct: 205 ICGTMWNGECLEALLLFRKMRSEGLMPDSVIVASILPACGRLEAVKLGMALQVCAVRSGF 264
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+S YVS+ ++ MY +C A+ VF+ + + D+V+WS LI GYSQ Y ++ +
Sbjct: 265 ESDLYVSNAVIDMYCKCGDPLEAHRVFSHMVYSDVVSWSTLIAGYSQNCLYQESYKLYIG 324
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ G + ++ SVL A K + G +H +V++ G V+V SAL+ MY+ CG
Sbjct: 325 MINVGLATNAIVATSVLPALGKLELLKQGKEMHNFVLKEGLMSDVVVGSALIVMYANCGS 384
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ +FE S+++I+ +NS+I+G L G AF FR I P+ T ++L
Sbjct: 385 IKEAESIFECTSDKDIMVWNSMIVGYNLVGDFESAFFTFRRIWGAEHRPNFITVVSILPI 444
Query: 417 CCHGGLVNDGREIFTRMTE 435
C G + G+EI +T+
Sbjct: 445 CTQMGALRQGKEIHGYVTK 463
>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
Length = 827
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 274/501 (54%), Gaps = 4/501 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L SA +FDK P+R++ W +I +A DA LF ++ + PD FTY+ + A
Sbjct: 199 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 258
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIKVFDGVSDPDL 170
C+E L + +H I GL D +LV Y+K + +D++ KVF+ + + ++
Sbjct: 259 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 318
Query: 171 VLCNSMISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+ ++I+ + G DK +++LF M+ P+ ++ ++ S G+ ++
Sbjct: 319 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 378
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+ +K S + V + L+SMYAR M A F+ LF +LV+++A++ GY++ +
Sbjct: 379 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 438
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
A F ++ G AS+L+ AA + G IHG +++ G++ + + +AL+
Sbjct: 439 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 498
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MYS+CG + QVF M +RN+I++ S+I G HGF +A E F ++E G P+E T
Sbjct: 499 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 558
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
+ A+L AC H G++++G++ F M +E+GI + EHY MV LLG +G L EA FI S+
Sbjct: 559 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 618
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P D V LL C ++GN++L A + E +P A ++LSN +A G+W DV+
Sbjct: 619 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 678
Query: 530 KLRDDIVDNGLRKEAGVSWVS 550
K+R + + L KEAG SW+
Sbjct: 679 KIRKSMKERNLIKEAGCSWIE 699
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 202/402 (50%), Gaps = 8/402 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYA---LNNVLPSARILFDKTPQRSVFLWNSI 75
L+ K+LH+ V + L D LV +YA + + +R +F++ P+ +V W +I
Sbjct: 265 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 324
Query: 76 IRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
I AY + + +A LF ++ ++P++F+++ + +AC SD V+ A+ G
Sbjct: 325 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 384
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + ++L++ Y++ +++A K FD + + +LV N+++ G+A +++ LF+
Sbjct: 385 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 444
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G +T L+SG + G+ IHG LK + S + + L+SMY+RC
Sbjct: 445 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 504
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ +A+ VFN + ++++W+++ITG+++ G +AL F K+ G K + + +VL+
Sbjct: 505 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 564
Query: 315 AAAKSANVWPGAV-IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNI 372
A + + G + +HG + + +VD+ + G L ++ +M +
Sbjct: 565 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 624
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ + +++ +HG T I+E+ PD+ LL
Sbjct: 625 LVWRTLLGACRVHGNTELGRHAAEMILEQ--EPDDPAAYILL 664
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 181/354 (51%), Gaps = 8/354 (2%)
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
L N +IR + R + A S + + PD TY+ + ++C + + VH
Sbjct: 12 LKNRLIRQLDVG-RLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKL 70
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMISGFAHCGFWDKS 189
+ SGL DS+ + L++ YSK + A +F+G+ + DLV ++M+S FA+ ++
Sbjct: 71 MQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQA 130
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVS 248
+ F ML LG P+EY +I + VG+ I+GF +K+ + D V L+
Sbjct: 131 IWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELID 190
Query: 249 MYARCNC-MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
M+ + + + SAY VF+ + +LVTW+ +IT ++Q G A+ F + + G D
Sbjct: 191 MFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRF 250
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC---GYLGLGIQVF 364
+SVL+A + + G +H VI+ G L V V +LVDMY+KC G + +VF
Sbjct: 251 TYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVF 310
Query: 365 ETMSERNIITYNSVILGLGLHG-FTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
E M E N++++ ++I G +A E F +I + P+ +FS++L AC
Sbjct: 311 EQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 364
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 3/244 (1%)
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
D M + PD T L+ +G+ +H ++S + V + L+S+Y++
Sbjct: 32 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 91
Query: 253 CNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
C +A +F + + DLV+WSA+++ ++ +A++ F + G + A+
Sbjct: 92 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 151
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSK-CGYLGLGIQVFETMSE 369
V+ A + + W G +I+G+V++ G+ E V V L+DM+ K G LG +VF+ M E
Sbjct: 152 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 211
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN++T+ +I G A + F D+ G PD T+S++L AC GL+ G+++
Sbjct: 212 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 271
Query: 430 FTRM 433
+R+
Sbjct: 272 HSRV 275
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 18/290 (6%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ +YA + + AR FD ++++ +N+I+ YA + +A LF + T +
Sbjct: 395 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 454
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FT+A + + + +HG + G + +AL++ YS+ I+ A +VF+
Sbjct: 455 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 514
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D +++ SMI+GFA GF ++L++F ML G P+E T V ++S ++S
Sbjct: 515 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 574
Query: 224 GQGIHGFCLKSSFDSYDYVS-----SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSAL 277
GQ H S + + V + +V + R + A NS+ D + W L
Sbjct: 575 GQK-H---FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 630
Query: 278 ITGYSQQG--DYGKALYYFRKLNMQGKKADP---VLIASVLAAAAKSANV 322
+ G + G+ + ++ ++ + DP +L++++ A+A + +V
Sbjct: 631 LGACRVHGNTELGR---HAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 677
>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
chloroplastic [Vitis vinifera]
gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
Length = 802
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/536 (32%), Positives = 285/536 (53%), Gaps = 1/536 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ + +H V K+ L D + L+ +YA + SA ++F + P R + WNS+I
Sbjct: 142 LAEGERVHGKVIKSGLDLDIYIGNSLIIMYAKIGCIESAEMVFREMPVRDLVSWNSMISG 201
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + S F+ + + +K D F+ I ACS L + +H + S L D
Sbjct: 202 YVSVGDGWRSLSCFREMQASGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMRSRLELD 261
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ ++LV Y+K +D A ++FD ++D +V N+MI G++ +S M
Sbjct: 262 VMVQTSLVDMYAKCGRMDYAERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQE 321
Query: 199 LGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
GK PD T++ L+ + + +G+ +HGF +++ F + + + LV MY C +
Sbjct: 322 GGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGECGKLK 381
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F + +L++W+A+I Y++ G+ KA+ F+ L + K D IAS+L A A
Sbjct: 382 PAECLFGQMNERNLISWNAMIASYTKNGENRKAMTLFQDLCNKTLKPDATTIASILPAYA 441
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ A++ IHGYV + + + VS+++V MY KCG L ++F+ M+ +++I++N+
Sbjct: 442 ELASLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNT 501
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
VI+ +HGF + E F ++ EKG P+ STF +LL +C GLVN+G E F M +Y
Sbjct: 502 VIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDY 561
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I EHY ++ L+G GNL+ A +FI +P + G+LL+ G+ +LAEI
Sbjct: 562 NINPGIEHYGCILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKGDVELAEIA 621
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
A + + V+LSN YAE GRW+DV +++ + GL K G S V SS
Sbjct: 622 AEHILSLEHDNTGCYVLLSNMYAEAGRWEDVERIKFHMKKEGLEKSVGCSVVDLSS 677
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 160/288 (55%), Gaps = 9/288 (3%)
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG-FWDKSLQLFDW 195
R+S++ + +++Y + + A+ +F+ + D + N MI GF G FWD ++ +
Sbjct: 58 RNSVSLTRALSSYVERGYMKNALDLFENMRQCDTFIWNVMIRGFVDNGLFWD-AVDFYHR 116
Query: 196 MLRLGKTPDEYT---LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
M G D +T ++ GL++ L+ G+ +HG +KS D Y+ + L+ MYA+
Sbjct: 117 MEFGGVRGDNFTYPFVIKACGGLYD---LAEGERVHGKVIKSGLDLDIYIGNSLIIMYAK 173
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C+ SA VF + DLV+W+++I+GY GD ++L FR++ G K D + +
Sbjct: 174 IGCIESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIGI 233
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A + + G IH +++ EL VMV ++LVDMY+KCG + ++F+ +++++I
Sbjct: 234 LGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKCGRMDYAERLFDQITDKSI 293
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCH 419
+ +N++I G L+ ++++F + R + E G L+PD T LL C
Sbjct: 294 VAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQ 341
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 47/98 (47%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL +++H V K L + F + +V +Y L AR +FD+ + V WN++I
Sbjct: 445 SLREAEQIHGYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIM 504
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
AYA+ + LF + +P+ T+ + +CS
Sbjct: 505 AYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLLSCS 542
>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 809
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/501 (32%), Positives = 274/501 (54%), Gaps = 4/501 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L SA +FDK P+R++ W +I +A DA LF ++ + PD FTY+ + A
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIKVFDGVSDPDL 170
C+E L + +H I GL D +LV Y+K + +D++ KVF+ + + ++
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300
Query: 171 VLCNSMISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+ ++I+ + G DK +++LF M+ P+ ++ ++ S G+ ++
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 360
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+ +K S + V + L+SMYAR M A F+ LF +LV+++A++ GY++ +
Sbjct: 361 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 420
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
A F ++ G AS+L+ AA + G IHG +++ G++ + + +AL+
Sbjct: 421 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 480
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MYS+CG + QVF M +RN+I++ S+I G HGF +A E F ++E G P+E T
Sbjct: 481 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 540
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
+ A+L AC H G++++G++ F M +E+GI + EHY MV LLG +G L EA FI S+
Sbjct: 541 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 600
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P D V LL C ++GN++L A + E +P A ++LSN +A G+W DV+
Sbjct: 601 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 660
Query: 530 KLRDDIVDNGLRKEAGVSWVS 550
K+R + + L KEAG SW+
Sbjct: 661 KIRKSMKERNLIKEAGCSWIE 681
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 202/402 (50%), Gaps = 8/402 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYA---LNNVLPSARILFDKTPQRSVFLWNSI 75
L+ K+LH+ V + L D LV +YA + + +R +F++ P+ +V W +I
Sbjct: 247 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 306
Query: 76 IRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
I AY + + +A LF ++ ++P++F+++ + +AC SD V+ A+ G
Sbjct: 307 ITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 366
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + ++L++ Y++ +++A K FD + + +LV N+++ G+A +++ LF+
Sbjct: 367 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 426
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G +T L+SG + G+ IHG LK + S + + L+SMY+RC
Sbjct: 427 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 486
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ +A+ VFN + ++++W+++ITG+++ G +AL F K+ G K + + +VL+
Sbjct: 487 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 546
Query: 315 AAAKSANVWPGAV-IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNI 372
A + + G + +HG + + +VD+ + G L ++ +M +
Sbjct: 547 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 606
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ + +++ +HG T I+E+ PD+ LL
Sbjct: 607 LVWRTLLGACRVHGNTELGRHAAEMILEQ--EPDDPAAYILL 646
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 175/341 (51%), Gaps = 7/341 (2%)
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + A S + + PD TY+ + ++C + + VH + SGL DS+ +
Sbjct: 6 RLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLN 65
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
L++ YSK + A +F+G+ + DLV ++M+S FA+ +++ F ML LG
Sbjct: 66 TLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFY 125
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNC-MNSAY 260
P+EY +I + VG+ I+GF +K+ + D V L+ M+ + + + SAY
Sbjct: 126 PNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAY 185
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+ + +LVTW+ +IT ++Q G A+ F + + G D +SVL+A +
Sbjct: 186 KVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELG 245
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC---GYLGLGIQVFETMSERNIITYNS 377
+ G +H VI+ G L V V +LVDMY+KC G + +VFE M E N++++ +
Sbjct: 246 LLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTA 305
Query: 378 VILGLGLHG-FTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+I G +A E F +I + P+ +FS++L AC
Sbjct: 306 IITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKAC 346
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 125/244 (51%), Gaps = 3/244 (1%)
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
D M + PD T L+ +G+ +H ++S + V + L+S+Y++
Sbjct: 14 LDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSK 73
Query: 253 CNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
C +A +F + + DLV+WSA+++ ++ +A++ F + G + A+
Sbjct: 74 CGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDMLELGFYPNEYCFAA 133
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSK-CGYLGLGIQVFETMSE 369
V+ A + + W G +I+G+V++ G+ E V V L+DM+ K G LG +VF+ M E
Sbjct: 134 VIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPE 193
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN++T+ +I G A + F D+ G PD T+S++L AC GL+ G+++
Sbjct: 194 RNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQL 253
Query: 430 FTRM 433
+R+
Sbjct: 254 HSRV 257
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 18/290 (6%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ +YA + + AR FD ++++ +N+I+ YA + +A LF + T +
Sbjct: 377 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 436
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FT+A + + + +HG + G + +AL++ YS+ I+ A +VF+
Sbjct: 437 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 496
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D +++ SMI+GFA GF ++L++F ML G P+E T V ++S ++S
Sbjct: 497 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 556
Query: 224 GQGIHGFCLKSSFDSYDYVS-----SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSAL 277
GQ H S + + V + +V + R + A NS+ D + W L
Sbjct: 557 GQK-H---FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 612
Query: 278 ITGYSQQG--DYGKALYYFRKLNMQGKKADP---VLIASVLAAAAKSANV 322
+ G + G+ + ++ ++ + DP +L++++ A+A + +V
Sbjct: 613 LGACRVHGNTELGR---HAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 659
>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 272/494 (55%), Gaps = 4/494 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+FDK P+R++ W +I +A DA LF ++ + PD FTY+ + AC+E
Sbjct: 12 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 71
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIKVFDGVSDPDLVLCNSM 176
L + +H I GL D +LV Y+K + +D++ KVF+ + + +++ ++
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 177 ISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
I+ +A G DK +++LF M+ P+ ++ ++ S G+ ++ + +K
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
S + V + L+SMYAR M A F+ LF +LV+++A++ GY++ +A F
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ G AS+L+ AA + G IHG +++ G++ + + +AL+ MYS+CG
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ QVF M +RN+I++ S+I G HGF +A E F ++E G P+E T+ A+L
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H G++++G++ F M +E+GI + EHY MV LLG +G L EA FI S+P D
Sbjct: 372 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 431
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
V LL C ++GN++L A + E +P A ++LSN +A G+W DV+K+R +
Sbjct: 432 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 491
Query: 536 VDNGLRKEAGVSWV 549
+ L KEAG SW+
Sbjct: 492 KERNLIKEAGCSWI 505
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 203/402 (50%), Gaps = 8/402 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYA---LNNVLPSARILFDKTPQRSVFLWNSI 75
L+ K+LH+ V + L D LV +YA + + +R +F++ P+ +V W +I
Sbjct: 72 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 131
Query: 76 IRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
I AYA + + +A LF ++ ++P++F+++ + +AC SD V+ A+ G
Sbjct: 132 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 191
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + ++L++ Y++ +++A K FD + + +LV N+++ G+A +++ LF+
Sbjct: 192 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 251
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G +T L+SG + G+ IHG LK + S + + L+SMY+RC
Sbjct: 252 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 311
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ +A+ VFN + ++++W+++ITG+++ G +AL F K+ G K + + +VL+
Sbjct: 312 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 371
Query: 315 AAAKSANVWPGAV-IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNI 372
A + + G + +HG + + +VD+ + G L ++ +M +
Sbjct: 372 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 431
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ + +++ +HG T I+E+ PD+ LL
Sbjct: 432 LVWRTLLGACRVHGNTELGRHAAEMILEQ--EPDDPAAYILL 471
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 156/311 (50%), Gaps = 5/311 (1%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A KVFD + + +LV MI+ FA G ++ LF M G PD +T ++S E
Sbjct: 9 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 68
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC---NCMNSAYHVFNSLFHPDLVTW 274
LL++G+ +H ++ V LV MYA+C ++ + VF + ++++W
Sbjct: 69 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 128
Query: 275 SALITGYSQQGDYGK-ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
+A+IT Y+Q G+ K A+ F K+ + + +SVL A ++ + G ++ Y +
Sbjct: 129 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 188
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ G V ++L+ MY++ G + + F+ + E+N+++YN+++ G + + +AF
Sbjct: 189 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 248
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F +I + G+ TF++LL G + G +I R+ + G ++ ++ +
Sbjct: 249 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMY 307
Query: 454 GLAGNLEEAYS 464
GN+E A+
Sbjct: 308 SRCGNIEAAFQ 318
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 18/290 (6%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ +YA + + AR FD ++++ +N+I+ YA + +A LF + T +
Sbjct: 202 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 261
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FT+A + + + +HG + G + +AL++ YS+ I+ A +VF+
Sbjct: 262 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 321
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D +++ SMI+GFA GF ++L++F ML G P+E T V ++S ++S
Sbjct: 322 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 381
Query: 224 GQGIHGFCLKSSFDSYDYVS-----SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSAL 277
GQ H S + + V + +V + R + A NS+ D + W L
Sbjct: 382 GQK-H---FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 437
Query: 278 ITGYSQQG--DYGKALYYFRKLNMQGKKADP---VLIASVLAAAAKSANV 322
+ G + G+ + ++ ++ + DP +L++++ A+A + +V
Sbjct: 438 LGACRVHGNTELGR---HAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 484
>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g15510, chloroplastic-like [Cucumis sativus]
Length = 878
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 282/544 (51%), Gaps = 6/544 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ ++R KE+HA V + D L+ +Y + +AR+LFDK P+R
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS--ENSDLPGLRFV 126
WN++I Y + LF + + PD T + AC +N L R V
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG--RGV 321
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG + S G D +++L+ YS L ++EA VF + D+V +MI+
Sbjct: 322 HGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLP 381
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
K+++ + M G PDE TLV ++S L +G +H +K+ S+ VS+ L
Sbjct: 382 FKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSL 441
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY++C C+++A VF ++ ++V+W++LI G +AL +FR++ + K +
Sbjct: 442 IDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMKPNS 500
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + SVL+A A+ + G IH + ++ G + +A++DMY +CG + F +
Sbjct: 501 VTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS 560
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
++++ +N ++ G G A E F ++E ++PDE TF +LLCAC G+V +G
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
E F M +Y + +HY +V +LG AG L++AY FI +P D A+ GALL+ C
Sbjct: 620 LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
I+ N +L EI A ++FE D + Y ++L N YA G WD V K+R + + GL + G
Sbjct: 680 IHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGC 739
Query: 547 SWVS 550
SWV
Sbjct: 740 SWVE 743
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 200/370 (54%), Gaps = 1/370 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K +R VF WN ++ YA A F++A +L+ +L +++P+ +T+ + + C+ SD
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ + +H I G D +AL+T Y K I A +FD + D + N+MISG
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G + L+LF M L PD T+ + S +G+G+HG+ +KS F
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+++ L+ MY+ + A VF+ + D+V+W+A+I KA+ ++ + +
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+G D + + SVL+A A ++ G +H I+ G V+VS++L+DMYSKC +
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++VF +S +N++++ S+ILGL ++ +++A FFR + E + P+ T ++L AC
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACAR 512
Query: 420 GGLVNDGREI 429
G + G+EI
Sbjct: 513 IGALMRGKEI 522
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 173/354 (48%), Gaps = 13/354 (3%)
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS------ENSDLPGLRFVHGG 129
+R L A +++L +++ + Y + R C E S + L
Sbjct: 69 LRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKS 128
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ LG +AL++ + + + +A VF +S+ D+ N ++ G+A G +D++
Sbjct: 129 CLCVRLG------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEA 182
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L L+ ML P+ YT ++ S ++ G+ IH ++ F+S V + L++M
Sbjct: 183 LNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITM 242
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C +++A +F+ + D ++W+A+I+GY + G + L F + D + +
Sbjct: 243 YVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITM 302
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+V +A N G +HGYV++ F + ++++L+ MYS G L VF M
Sbjct: 303 TTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES 362
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGL 422
++++++ ++I L H ++A E ++ + +G+ PDE T ++L AC C G L
Sbjct: 363 KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHL 416
>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Cucumis sativus]
Length = 878
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 282/544 (51%), Gaps = 6/544 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ ++R KE+HA V + D L+ +Y + +AR+LFDK P+R
Sbjct: 204 VLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRD 263
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS--ENSDLPGLRFV 126
WN++I Y + LF + + PD T + AC +N L R V
Sbjct: 264 RISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLG--RGV 321
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG + S G D +++L+ YS L ++EA VF + D+V +MI+
Sbjct: 322 HGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLP 381
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
K+++ + M G PDE TLV ++S L +G +H +K+ S+ VS+ L
Sbjct: 382 FKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSL 441
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY++C C+++A VF ++ ++V+W++LI G +AL +FR++ + K +
Sbjct: 442 IDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMK-ESMKPNS 500
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + SVL+A A+ + G IH + ++ G + +A++DMY +CG + F +
Sbjct: 501 VTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRCGRKVPALNQFNS 560
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
++++ +N ++ G G A E F ++E ++PDE TF +LLCAC G+V +G
Sbjct: 561 -QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISLLCACSKSGMVTEG 619
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
E F M +Y + +HY +V +LG AG L++AY FI +P D A+ GALL+ C
Sbjct: 620 LEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRPDAAIWGALLNACR 679
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
I+ N +L EI A ++FE D + Y ++L N YA G WD V K+R + + GL + G
Sbjct: 680 IHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRSLMRERGLSADPGC 739
Query: 547 SWVS 550
SWV
Sbjct: 740 SWVE 743
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/370 (30%), Positives = 200/370 (54%), Gaps = 1/370 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K +R VF WN ++ YA A F++A +L+ +L +++P+ +T+ + + C+ SD
Sbjct: 154 VFGKMSERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEIRPNVYTFPSVLKTCAGVSD 213
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ + +H I G D +AL+T Y K I A +FD + D + N+MISG
Sbjct: 214 IARGKEIHAHVIRFGFESDVDVGNALITMYVKCGDISNARMLFDKMPKRDRISWNAMISG 273
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G + L+LF M L PD T+ + S +G+G+HG+ +KS F
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+++ L+ MY+ + A VF+ + D+V+W+A+I KA+ ++ + +
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESKDVVSWTAMIASLVSHKLPFKAVETYKMMEL 393
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+G D + + SVL+A A ++ G +H I+ G V+VS++L+DMYSKC +
Sbjct: 394 EGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLVSHVIVSNSLIDMYSKCKCVDN 453
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++VF +S +N++++ S+ILGL ++ +++A FFR + E + P+ T ++L AC
Sbjct: 454 ALEVFRNISGKNVVSWTSLILGLRINNRSFEALLFFRQMKE-SMKPNSVTLISVLSACAR 512
Query: 420 GGLVNDGREI 429
G + G+EI
Sbjct: 513 IGALMRGKEI 522
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 173/354 (48%), Gaps = 13/354 (3%)
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS------ENSDLPGLRFVHGG 129
+R L A +++L +++ + Y + R C E S + L
Sbjct: 69 LRELCLQGNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKS 128
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ LG +AL++ + + + +A VF +S+ D+ N ++ G+A G +D++
Sbjct: 129 CLCVRLG------NALLSMFVRFGNLLDAWYVFGKMSERDVFSWNVLVGGYAKAGCFDEA 182
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L L+ ML P+ YT ++ S ++ G+ IH ++ F+S V + L++M
Sbjct: 183 LNLYHRMLWAEIRPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFGFESDVDVGNALITM 242
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C +++A +F+ + D ++W+A+I+GY + G + L F + D + +
Sbjct: 243 YVKCGDISNARMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITM 302
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+V +A N G +HGYV++ F + ++++L+ MYS G L VF M
Sbjct: 303 TTVASACELLDNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSLGRLEEAETVFSRMES 362
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGL 422
++++++ ++I L H ++A E ++ + +G+ PDE T ++L AC C G L
Sbjct: 363 KDVVSWTAMIASLVSHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHL 416
>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like, partial [Vitis vinifera]
Length = 629
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/495 (32%), Positives = 272/495 (54%), Gaps = 4/495 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+FDK P+R++ W +I +A DA LF ++ + PD FTY+ + AC+E
Sbjct: 7 VFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGL 66
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIKVFDGVSDPDLVLCNSM 176
L + +H I GL D +LV Y+K + +D++ KVF+ + + +++ ++
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 177 ISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
I+ +A G DK +++LF M+ P+ ++ ++ S G+ ++ + +K
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
S + V + L+SMYAR M A F+ LF +LV+++A++ GY++ +A F
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ G AS+L+ AA + G IHG +++ G++ + + +AL+ MYS+CG
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ QVF M +RN+I++ S+I G HGF +A E F ++E G P+E T+ A+L
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H G++++G++ F M +E+GI + EHY MV LLG +G L EA FI S+P D
Sbjct: 367 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 426
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
V LL C ++GN++L A + E +P A ++LSN +A G+W DV+K+R +
Sbjct: 427 LVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM 486
Query: 536 VDNGLRKEAGVSWVS 550
+ L KEAG SW+
Sbjct: 487 KERNLIKEAGCSWIE 501
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 203/402 (50%), Gaps = 8/402 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYA---LNNVLPSARILFDKTPQRSVFLWNSI 75
L+ K+LH+ V + L D LV +YA + + +R +F++ P+ +V W +I
Sbjct: 67 LALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSWTAI 126
Query: 76 IRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
I AYA + + +A LF ++ ++P++F+++ + +AC SD V+ A+ G
Sbjct: 127 ITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLG 186
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + ++L++ Y++ +++A K FD + + +LV N+++ G+A +++ LF+
Sbjct: 187 IASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFN 246
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G +T L+SG + G+ IHG LK + S + + L+SMY+RC
Sbjct: 247 EIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCG 306
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ +A+ VFN + ++++W+++ITG+++ G +AL F K+ G K + + +VL+
Sbjct: 307 NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLS 366
Query: 315 AAAKSANVWPGAV-IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNI 372
A + + G + +HG + + +VD+ + G L ++ +M +
Sbjct: 367 ACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADA 426
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ + +++ +HG T I+E+ PD+ LL
Sbjct: 427 LVWRTLLGACRVHGNTELGRHAAEMILEQ--EPDDPAAYILL 466
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 156/311 (50%), Gaps = 5/311 (1%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A KVFD + + +LV MI+ FA G ++ LF M G PD +T ++S E
Sbjct: 4 AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC---NCMNSAYHVFNSLFHPDLVTW 274
LL++G+ +H ++ V LV MYA+C ++ + VF + ++++W
Sbjct: 64 LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123
Query: 275 SALITGYSQQGDYGK-ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
+A+IT Y+Q G+ K A+ F K+ + + +SVL A ++ + G ++ Y +
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ G V ++L+ MY++ G + + F+ + E+N+++YN+++ G + + +AF
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F +I + G+ TF++LL G + G +I R+ + G ++ ++ +
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKG-GYKSNQCICNALISMY 302
Query: 454 GLAGNLEEAYS 464
GN+E A+
Sbjct: 303 SRCGNIEAAFQ 313
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 18/290 (6%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ +YA + + AR FD ++++ +N+I+ YA + +A LF + T +
Sbjct: 197 LISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGIS 256
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FT+A + + + +HG + G + +AL++ YS+ I+ A +VF+
Sbjct: 257 AFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFN 316
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D +++ SMI+GFA GF ++L++F ML G P+E T V ++S ++S
Sbjct: 317 EMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISE 376
Query: 224 GQGIHGFCLKSSFDSYDYVS-----SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSAL 277
GQ H S + + V + +V + R + A NS+ D + W L
Sbjct: 377 GQK-H---FNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTL 432
Query: 278 ITGYSQQG--DYGKALYYFRKLNMQGKKADP---VLIASVLAAAAKSANV 322
+ G + G+ + ++ ++ + DP +L++++ A+A + +V
Sbjct: 433 LGACRVHGNTELGR---HAAEMILEQEPDDPAAYILLSNLHASAGQWKDV 479
>gi|413952893|gb|AFW85542.1| hypothetical protein ZEAMMB73_270374 [Zea mays]
Length = 716
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 273/513 (53%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F LV +YA L AR +F++ P R+V W S+I +D LF +
Sbjct: 199 DGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQNGFASDGLLLFNKMR 258
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ + P +T A + ACS L R++HG I GL +S S+AL+ Y K +D
Sbjct: 259 QDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELD 318
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A VFD +S DLVL +MI G+ G +L+LF P+ T ++S
Sbjct: 319 HARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANIAPNSVTTATVLSASA 378
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ LS+G+ IHG +K Y+ V + LV MYA+C ++ A +F + + D+V W++
Sbjct: 379 QLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKDVVAWNS 438
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+GY++ AL F+++++QG D + + + L+A+ ++ G IHGY ++H
Sbjct: 439 MISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHGYAVKHA 498
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
F ++ V +AL+++Y+KCG L +VF+ M++RN +T+ ++I G G+ G + + F
Sbjct: 499 FVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIHLFG 558
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
++++ G+ P++ F+++L C H G+V G+ F M + + I +HY MV +L A
Sbjct: 559 EMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHYACMVDVLARA 618
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
GNLE+A FI ++P D +V GA L C ++ AE ++ P + V++S
Sbjct: 619 GNLEDALEFIDNMPMQADTSVWGAFLHGCELHSRLQFAEEAIKRMMVLHPERPDLYVLIS 678
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N Y +G WD + +R + + GL K G S V
Sbjct: 679 NLYTSNGMWDKSLAIRRWMQEKGLVKLPGCSSV 711
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/422 (31%), Positives = 214/422 (50%), Gaps = 8/422 (1%)
Query: 9 VLELSKSHQSLSRTKELHA--LVAKASLLRDPFYA-TKLVRLYALNNVLPSARILFDKTP 65
+L L S +L + LHA L LL A TKL+ YA L SAR++FD TP
Sbjct: 65 LLRLLPSCGTLLSLRVLHARLLTHPQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTP 124
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP---DNFTYACITRACSENSDLPG 122
+ + + +++ R DA +L ++ R + P D+F + +AC +++
Sbjct: 125 RPDAYSYGAMLWCLVQTERHADAVALHHDMRRRRPCPEAQDDFVLSLALKACIRSAEYSY 184
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R +H AI G G D ++LV Y+K ++ A KVF+ + D ++V SMISG
Sbjct: 185 GRSLHCDAIKVG-GADGFVMNSLVDMYAKAEDLECARKVFERIPDRNVVSWTSMISGCVQ 243
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
GF L LF+ M + P EYT+ +I+ L G+ +HG +K S ++
Sbjct: 244 NGFASDGLLLFNKMRQDNVPPSEYTIATVITACSALFGLHQGRWMHGSVIKQGLMSNSFI 303
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
S+ L+ MY +C ++ A VF+ L + DLV W+ +I GY+Q G+ AL F
Sbjct: 304 SAALLDMYVKCGELDHARCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKRFANI 363
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V A+VL+A+A+ ++ G IHG ++ G +V +ALVDMY+KC + +
Sbjct: 364 APNSVTTATVLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADR 423
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE-STFSALLCACCHGG 421
+F +S ++++ +NS+I G + A F+ + +G +PD S +AL + C G
Sbjct: 424 IFGRISNKDVVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGD 483
Query: 422 LV 423
L+
Sbjct: 484 LL 485
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 116/278 (41%), Gaps = 10/278 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S + LS K +H L K L+ LV +YA + A +F + +
Sbjct: 373 VLSASAQLRDLSLGKSIHGLAVKLGLVEYNVVGNALVDMYAKCQAVSEADRIFGRISNKD 432
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS+I YA + +DA LFK + PD + A DL + +HG
Sbjct: 433 VVAWNSMISGYAENNMGDDALMLFKQMSLQGSSPDAISVVNALSASVCLGDLLIGKSIHG 492
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ + +AL+ Y+K + A +VFD ++D + V +MI G+ G
Sbjct: 493 YAVKHAFVSNIYVDTALLNLYNKCGDLLSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAG 552
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVS 243
S+ LF ML+ G P++ ++S +++ G+ F + S Y
Sbjct: 553 SIHLFGEMLKDGVYPNDIAFTSILSTCSHSGMVTAGKRYFDSMAQHFNITPSMKHY---- 608
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
+ +V + AR + A +++ D W A + G
Sbjct: 609 ACMVDVLARAGNLEDALEFIDNMPMQADTSVWGAFLHG 646
>gi|297596789|ref|NP_001043072.2| Os01g0374200 [Oryza sativa Japonica Group]
gi|255673241|dbj|BAF04986.2| Os01g0374200 [Oryza sativa Japonica Group]
Length = 629
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 278/526 (52%), Gaps = 2/526 (0%)
Query: 26 HALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
HAL K S + + + T L+ +Y ++ AR +FD PQR+ F W++++ YA
Sbjct: 34 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 93
Query: 85 FNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A LF+ +L + F + A S L +HG + GL +
Sbjct: 94 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 153
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+LVT Y+K + A VF+ + + + ++MI+G+A G D ++ +F M G TP
Sbjct: 154 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 213
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
E+T VG+++ + L+VG+ HG +K F+ YV S LV MYA+C C+ A F
Sbjct: 214 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 273
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L+ D+V W+A+++G+ Q G++ +AL + +++ +G IAS L A A A +
Sbjct: 274 DQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 333
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
PG +H ++++G L V SAL MYSKCG L G+ VF + +R++I +NS+I G
Sbjct: 334 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 393
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+G A + F ++ +G PD TF +LCAC H GLV+ G E F+ MT++YG+ +
Sbjct: 394 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 453
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
+HY MV +L AG L+EA FI S+ + +L C + D+ +L E
Sbjct: 454 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLME 513
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ ++LSN YA +W+DV ++R + G+ K+ G SWV
Sbjct: 514 LGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWV 559
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 165/360 (45%), Gaps = 1/360 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L+ K LL LV +YA + +A +F+ + +R+ W+++I YA
Sbjct: 134 EQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQN 193
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A S+F + P FT+ + A S+ L + HG + G
Sbjct: 194 GEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK 253
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y+K I +A + FD + + D+VL +M+SG G +++L L+ M + G
Sbjct: 254 SALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 313
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P + T+ + + L G+ +H +K V S L +MY++C + V
Sbjct: 314 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSV 373
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D++ W+++I+G+SQ G AL F ++ M+G D + ++L A + V
Sbjct: 374 FRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLV 433
Query: 323 WPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G + + +G + + +VD+ S+ G L E+++ + ++LG
Sbjct: 434 DRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLG 493
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L+ K+ H L+ K + + LV +YA + A+ FD+ +
Sbjct: 221 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 280
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ LW +++ + +A +L+ + + + P T A RAC+ + L + +H
Sbjct: 281 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 340
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GLG + SAL T YSK +++ + VF + D D++ NS+ISGF+ G +
Sbjct: 341 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 400
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI 212
+L LF+ M G PD T + ++
Sbjct: 401 ALDLFEEMKMEGTIPDNITFINIL 424
>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Brachypodium distachyon]
Length = 747
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 284/546 (52%), Gaps = 3/546 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDP-FYATKLVRLYALNNVLPSARILFDKTP 65
F L ++ S + +LHA + L+R F + LV Y + A +FD+
Sbjct: 71 FTFPSLIRAAPSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMS 130
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R V WN+++ R +A LF ++ + D T + + C D
Sbjct: 131 ERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALV 190
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H A+ GL ++ +AL+ Y KL +++EA VF G+ DLV NS+ISG G
Sbjct: 191 MHVYAVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQ 250
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-S 244
+L++F M G +PD TLV L S + + + +H + ++ +D D ++ +
Sbjct: 251 TAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGN 310
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM-QGKK 303
+V MYA+ + + +A +F+S+ D V+W+ LITGY Q G +A+ + + +G K
Sbjct: 311 AIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLK 370
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
A SVL A + + G +H I+ G + V V + L+D+Y+KCG L + +
Sbjct: 371 AIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLL 430
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
FE M R+ +N++I GLG+HG +A F + ++G+ PD TF +LL AC H GLV
Sbjct: 431 FEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAGLV 490
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+ GR F M Y I +HY M +LG AG L+EA++FI ++P D AV GALL
Sbjct: 491 DQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGALLG 550
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+GN ++ ++ + LFE DP Y V++SN YA+ G+WD V ++R + L+K
Sbjct: 551 ACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDEVRSLVRRQNLQKT 610
Query: 544 AGVSWV 549
G S +
Sbjct: 611 PGWSSI 616
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 208/421 (49%), Gaps = 23/421 (5%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQ--LKPDNFTYACITRACSENSDLPGLRFVHGGA 130
N++I A++ A A L +++L +PD FT+ + RA N+ L H A
Sbjct: 37 NTLIAAFSRAALPRLAFPLLRHILSCAYPFRPDGFTFPSLIRAAPSNASAAQL---HACA 93
Query: 131 IVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ GL R S+ TS +LV AY + I EA KVFD +S+ D+ N+M+SG ++
Sbjct: 94 LRLGLVRPSVFTSGSLVHAYLRFGRISEAYKVFDEMSERDVPAWNAMLSGLCRNARAAEA 153
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSS 244
+ LF M+ G D T+ ++ P + +G + H + +K D +V +
Sbjct: 154 VGLFGRMVGEGVAGDTVTVSSVL-----PMCVLLGDQVLALVMHVYAVKHGLDKELFVCN 208
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+ +Y + + A VF+ + DLVTW+++I+G Q+G AL F+ + G
Sbjct: 209 ALIDVYGKLGMLEEAQCVFHGMECRDLVTWNSIISGCEQRGQTAAALKMFQGMRGSGVSP 268
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-SVMVSSALVDMYSKCGYLGLGIQV 363
D + + S+ +A A+ + +H YV++ G+++ ++ +A+VDMY+K + ++
Sbjct: 269 DVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIVDMYAKLSNIEAAQRM 328
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGL 422
F++M ++ +++N++I G +G +A E + + + +GL + TF ++L A H G
Sbjct: 329 FDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAIQGTFVSVLPAYSHLGA 388
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK----PVDPAVS 478
+ G + ++ + G+ ++ L G L EA +P+ P + +S
Sbjct: 389 LQQGMRMHA-LSIKIGLNVDVYVGTCLIDLYAKCGKLAEAMLLFEKMPRRSTGPWNAIIS 447
Query: 479 G 479
G
Sbjct: 448 G 448
>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
Length = 694
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 295/542 (54%), Gaps = 9/542 (1%)
Query: 13 SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLW 72
S +H++ + K++HA + L F TKL+ + + AR +FD P+ +F W
Sbjct: 30 SATHKA--QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPW 87
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N+IIR Y+ + F DA ++ N+ ++ PD+FT+ + +ACS S L RFVH
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFR 147
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD--LVLCNSMISGFAHCGFWDKSL 190
G D + L+ Y+K + A VF+G+ P+ +V +++S +A G ++L
Sbjct: 148 LGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEAL 207
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
++F M ++ PD LV +++ L G+ IH +K + + L +MY
Sbjct: 208 EIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMY 267
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + +A +F+ + P+L+ W+A+I+GY++ G +A+ F ++ + + D + I
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISIT 327
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S ++A A+ ++ ++ YV + + V +SSAL+DM++KCG + VF+ +R
Sbjct: 328 SAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR 387
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++ ++++I+G GLHG +A +R + G++P++ TF LL AC H G+V +G F
Sbjct: 388 DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFF 447
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIY 488
M ++ I + +HY ++ LLG AG+L++AY I + PV P V+ GALLS C +
Sbjct: 448 NLMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM--PVQPGVTVWGALLSACKKH 504
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ +L E A QLF DP + V LSN YA WD V ++R + + GL K+ G SW
Sbjct: 505 RHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 549 VS 550
V
Sbjct: 565 VE 566
>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
Length = 1151
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 272/532 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + +LH+ + KA + D L+ LY + +A ++F+ + + +V LWN ++ A
Sbjct: 260 LQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVA 319
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + + LF + ++P+ FTY CI R C+ ++ +H ++ +G D
Sbjct: 320 FGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESD 379
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +++A +V + + + D+V SMI+G+ +L F M +
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQK 439
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L ISG + + G IH S + + + LV++YARC +
Sbjct: 440 CGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ F + D +T + L++G++Q G + +AL F +++ G K + S L+A+A
Sbjct: 500 AFSSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IH VI+ G V +AL+ +Y KCG F MSERN +++N++
Sbjct: 560 LAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTI 619
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + F + ++G+ P++ TF +L AC H GLV +G F M++EYG
Sbjct: 620 ITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYG 679
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + +HY ++ + G AG L+ A FI +P D V LLS C ++ N ++ E A
Sbjct: 680 IRPRPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAA 739
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA +W + ++R + D G+RKE G SW+
Sbjct: 740 KHLLELEPHDSASYVLLSNAYAVTEKWANRDQVRKMMRDRGVRKEPGRSWIE 791
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/438 (25%), Positives = 202/438 (46%), Gaps = 1/438 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K + F ++ LY A +F P R +N++I +A
Sbjct: 165 IHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGH 224
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +F+ + + L PD T + + AC+ DL +H +G+ D I +
Sbjct: 225 GEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGS 284
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K ++ A+ +F+ ++VL N M+ F KS +LF M G P+
Sbjct: 285 LLDLYVKCGDVETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPN 344
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++T ++ + +G+ IH +K+ F+S YVS VL+ MY++ + A V
Sbjct: 345 QFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLE 404
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L D+V+W+++I GY Q AL F+++ G D + +AS ++ A +
Sbjct: 405 MLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQ 464
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH + G+ V + +ALV++Y++CG + FE M ++ IT N ++ G
Sbjct: 465 GLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQ 524
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G +A + F + + G+ + TF + L A + + G++I R+ + G +TE
Sbjct: 525 SGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHSFETE 583
Query: 445 HYIYMVKLLGLAGNLEEA 462
++ L G G+ E+A
Sbjct: 584 VGNALISLYGKCGSFEDA 601
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 200/441 (45%), Gaps = 1/441 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA L + L+ LY+ N ++ AR +F++ R W +++ YA
Sbjct: 63 EIHAKAVTRGLGKYRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A L++ + R + P + + + +C++ R +H G + +
Sbjct: 123 LGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGN 182
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A++T Y + A +VF + D V N++ISG A CG + +L++F+ M G +P
Sbjct: 183 AVITLYLRCGSFRLAERVFCDMPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSP 242
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D T+ L++ L G +H + K+ S + L+ +Y +C + +A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
NS ++V W+ ++ + Q D K+ F ++ G + + +L + +
Sbjct: 303 NSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRTCTCTREID 362
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH ++ GFE + VS L+DMYSK G+L +V E + E++++++ S+I G
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
H A F+++ + G+ PD ++ + C + G +I R+ G
Sbjct: 423 QHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYSGDV 481
Query: 444 EHYIYMVKLLGLAGNLEEAYS 464
+ +V L G + EA+S
Sbjct: 482 SIWNALVNLYARCGRIREAFS 502
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L S + + + K++HA V K + L+ LY A++ F + +R+
Sbjct: 554 LSASANLAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNE 613
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
WN+II + + R +A LF + + +KP++ T+ + ACS
Sbjct: 614 VSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACS 659
>gi|297833652|ref|XP_002884708.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330548|gb|EFH60967.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1028
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 279/534 (52%), Gaps = 4/534 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + H+++ K L ++ F LV +YA L AR +F+ R WN+II
Sbjct: 444 LEMGSQFHSIIIKKKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGG 503
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y ++A LF + + D A +AC+ L + VH ++ GL R
Sbjct: 504 YVQDENESEAFDLFMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRV 563
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
T S+L+ YSK +I++A KVF + + +V N++I+G++ ++++ LF ML
Sbjct: 564 LHTGSSLIDMYSKCGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLT 622
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY-DYVSSVLVSMYARCNCMN 257
G P E T ++ +P L++G HG +K F S +Y+ L+ +Y M
Sbjct: 623 KGVNPSEITFATIVEACHKPESLTLGTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMA 682
Query: 258 SAYHVFNSLFHPD-LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F+ L P +V W+ +++G+SQ G Y +AL +++++ G D +VL
Sbjct: 683 EACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVC 742
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITY 375
+ +++ G IH + +L + S+ L+DMY+KCG + QVF+ M R N++++
Sbjct: 743 SVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKSSSQVFDEMRRRSNVVSW 802
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
NS+I G +G+ A + F + + + PDE TF +L AC H G V+DGR+IF M
Sbjct: 803 NSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIG 862
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+YGI+A+ +H MV LLG G L+EA FI + D + +LL C I+G+ E
Sbjct: 863 QYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDMRGE 922
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
I A +L E +P+ + V+LSN YA GRW++ LR + D G++K G SW+
Sbjct: 923 IAAERLIELEPQNSSAYVLLSNIYASQGRWEEANALRKAMRDRGVKKVPGYSWI 976
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 7/422 (1%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L AR+LF + P V WN +I + A F N+ ++ +K T + A
Sbjct: 277 LKDARLLFGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
++L VH AI GL + S+LV+ YSK ++ A KVF+ + + + VL
Sbjct: 337 IGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLW 396
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+MI G+AH G K ++LF M G D++T L+S L +G H +K
Sbjct: 397 NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIK 456
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+V + LV MYA+C + A +F + D V+W+ +I GY Q + +A
Sbjct: 457 KKLTKNLFVGNALVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDL 516
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F ++N G +D +AS L A ++ G +H ++ G + + S+L+DMYSK
Sbjct: 517 FMRMNSCGIVSDGACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSK 576
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + +VF +M E ++++ N++I G + +A F++++ KG+NP E TF+ +
Sbjct: 577 CGIIEDARKVFSSMPEWSVVSMNALIAGYSQNNLE-EAVVLFQEMLTKGVNPSEITFATI 635
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN---LEEAYSFIWSLP 470
+ AC + G + ++ ++G ++ E+ + LLGL N + EA + L
Sbjct: 636 VEACHKPESLTLGTQFHGQII-KWGFSSEGEY--LGISLLGLYMNSRRMAEACALFSELS 692
Query: 471 KP 472
P
Sbjct: 693 SP 694
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/374 (27%), Positives = 180/374 (48%), Gaps = 36/374 (9%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
+V LYA + A F+ + ++ V WNS++ Y+ + F +L + P+
Sbjct: 101 IVDLYAKCAQVSYAEKQFN-SLEKDVTAWNSMLSMYSSIGQPGKVLRSFVSLFENLIFPN 159
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FT++ + + +++ R +H I GL R+S ALV Y+K + +A +VFD
Sbjct: 160 KFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRLGDAQRVFD 219
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
G+ DP+ V + SG+ G ++++ +F+ M G PD V +I+ + +S+
Sbjct: 220 GIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTVIN-----TYISL 274
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ + A +F + PD+V W+ +I+G+ +
Sbjct: 275 GK------------------------------LKDARLLFGEMPSPDVVAWNVMISGHGK 304
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+G A+ YF + K+ + SVL+A AN+ G V+H I+ G ++ V
Sbjct: 305 RGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYV 364
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S+LV MYSKC + +VFE + ERN + +N++I G +G +++ E F D+ G
Sbjct: 365 GSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMELFMDMKSSGY 424
Query: 404 NPDESTFSALLCAC 417
N D+ TF++LL C
Sbjct: 425 NIDDFTFTSLLSTC 438
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 195/409 (47%), Gaps = 3/409 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K L + + + LV +Y+ + +A +F+ +R+ LWN++IR YA
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGE 408
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ LF ++ + D+FT+ + C+ + DL H I L ++ +A
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNA 468
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K +++A ++F+ + D D V N++I G+ ++ LF M G D
Sbjct: 469 LVDMYAKCGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSD 528
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
L + L G+ +H +K D + S L+ MY++C + A VF+
Sbjct: 529 GACLASTLKACTNVHGLYQGKQVHCLSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFS 588
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S+ +V+ +ALI GYSQ + +A+ F+++ +G + A+++ A K ++
Sbjct: 589 SMPEWSVVSMNALIAGYSQN-NLEEAVVLFQEMLTKGVNPSEITFATIVEACHKPESLTL 647
Query: 325 GAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGL 382
G HG +I+ GF + +L+ +Y + +F E S ++I+ + ++ G
Sbjct: 648 GTQFHGQIIKWGFSSEGEYLGISLLGLYMNSRRMAEACALFSELSSPKSIVLWTGMMSGH 707
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+GF +A +F++++ G PD++TF +L C + +GR I +
Sbjct: 708 SQNGFYEEALKFYKEMRHDGALPDQATFVTVLRVCSVLSSLREGRAIHS 756
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/478 (24%), Positives = 209/478 (43%), Gaps = 43/478 (8%)
Query: 1 MFFNLHF-------LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV 53
+F NL F +VL S ++ +++H + K L R+ + LV +YA +
Sbjct: 151 LFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDR 210
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L A+ +FD + W + Y A +A +F+ + +PD+ + +
Sbjct: 211 LGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHRPDHLAFVTV--- 267
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
+ Y L + +A +F + PD+V
Sbjct: 268 --------------------------------INTYISLGKLKDARLLFGEMPSPDVVAW 295
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N MISG G +++ F M + TL ++S + + L +G +H +K
Sbjct: 296 NVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIK 355
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
S YV S LVSMY++C M +A VF +L + V W+A+I GY+ G+ K +
Sbjct: 356 LGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEERNDVLWNAMIRGYAHNGESHKVMEL 415
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F + G D S+L+ A S ++ G+ H +I+ ++ V +ALVDMY+K
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAVSHDLEMGSQFHSIIIKKKLTKNLFVGNALVDMYAK 475
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG L Q+FE M +R+ +++N++I G +AF+ F + G+ D + ++
Sbjct: 476 CGALEDARQIFEHMCDRDNVSWNTIIGGYVQDENESEAFDLFMRMNSCGIVSDGACLAST 535
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
L AC + + G+++ ++ + G+ ++ + G +E+A S+P+
Sbjct: 536 LKACTNVHGLYQGKQVHC-LSVKCGLDRVLHTGSSLIDMYSKCGIIEDARKVFSSMPE 592
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 101/213 (47%), Gaps = 1/213 (0%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +G+ +H L DS + + +V +YA+C ++ A FNSL D+ W+++++
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSM 134
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
YS G GK L F L + + VL+ +A+ NV G IH +I+ G E +
Sbjct: 135 YSSIGQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERN 194
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
ALVDMY+KC LG +VF+ + + N + + + G G +A F +
Sbjct: 195 SYCGGALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRG 254
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+G PD F ++ G + D R +F M
Sbjct: 255 EGHRPDHLAFVTVINTYISLGKLKDARLLFGEM 287
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 127/293 (43%), Gaps = 36/293 (12%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ VH +++ G+ + +A+V Y+K + + A K F+ + + D+ NSM+S ++
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFNSL-EKDVTAWNSMLSMYSSI 138
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G K L+ F + P+++T ++S + + G+ IH +K + Y
Sbjct: 139 GQPGKVLRSFVSLFENLIFPNKFTFSIVLSTSARETNVEFGRQIHCSMIKMGLERNSYCG 198
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
LV MYA+C+ + A VF+ + P+ V W+ L +GY + G +A+ F ++ +G +
Sbjct: 199 GALVDMYAKCDRLGDAQRVFDGIVDPNTVCWTCLFSGYVKAGLPEEAVIVFERMRGEGHR 258
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D + +V ++ Y G L +
Sbjct: 259 PDHLAFVTV-----------------------------------INTYISLGKLKDARLL 283
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
F M +++ +N +I G G G A E+F ++ + + ST ++L A
Sbjct: 284 FGEMPSPDVVAWNVMISGHGKRGCEIVAIEYFLNMRKSSVKSTRSTLGSVLSA 336
>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
Length = 1084
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/506 (32%), Positives = 276/506 (54%), Gaps = 1/506 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ YA +N++ +A ++FD+ P + WNS+I ++A LF + + D
Sbjct: 451 LISFYAKSNMIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELD 510
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
+ T + AC+ + R VHG ++ +GL ++ ++AL+ YS S ++F
Sbjct: 511 STTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFR 570
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
++ ++V +MI+ + G +DK L M+ G PD + + ++ G L
Sbjct: 571 NMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQ 630
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +HG+ +++ + V++ L+ MY C M A VF+ + + D+++W+ LI GYS+
Sbjct: 631 GKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSR 690
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
++ F + +Q K + V + +L A A +++ G IH Y ++ GF
Sbjct: 691 NNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYT 749
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S+ALVDMY KCG L + +F+ ++++N+I++ +I G G+HG A F + G+
Sbjct: 750 SNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGV 809
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
PD ++FSA+L ACCH GL +G + F M +EY I+ K +HY +V LL GNL+EA+
Sbjct: 810 EPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAF 869
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDG 523
FI S+P D ++ +LL C I+ + LAE VA ++F+ +P Y V+L+N YAE
Sbjct: 870 EFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYAEAE 929
Query: 524 RWDDVMKLRDDIVDNGLRKEAGVSWV 549
RW+ V KL++ I GLR+ G SW+
Sbjct: 930 RWEAVKKLKNKIGGRGLRENTGCSWI 955
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 204/394 (51%), Gaps = 2/394 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQR-SVFLWNSIIRAYALAHRFNDAKSLFKNL 95
D +KLV +Y + SAR +FD P + +V +WN I+ YA A F ++ LF+ +
Sbjct: 342 DEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQM 401
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ PD +C+ + + S HG + G G +AL++ Y+K ++I
Sbjct: 402 HELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMI 461
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D A+ VFD + D + NS+ISG G ++++LF M G D TL+ ++
Sbjct: 462 DNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLPAC 521
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
VG+ +HG+ +K+ +++ L+ MY+ C+ +S +F ++ ++V+W+
Sbjct: 522 ARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWT 581
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A+IT Y++ G + K +++ + G K D + SVL A ++ G +HGY I++
Sbjct: 582 AMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRN 641
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G E + V++AL++MY C + VF+ ++ ++II++N++I G + F ++F F
Sbjct: 642 GMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLF 701
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
D++ + P+ T + +L A + GREI
Sbjct: 702 SDMLLQ-FKPNTVTMTCILPAVASISSLERGREI 734
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 118/422 (27%), Positives = 207/422 (49%), Gaps = 13/422 (3%)
Query: 9 VLELSKSHQSLSRTKELHALV-AKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
V++L +SL + HALV A + +LV Y L AR++FD+ P R
Sbjct: 100 VVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPR 159
Query: 68 --SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
V +W S++ AYA A F + SLF+ + + PD +C+ + + +
Sbjct: 160 VADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEV 219
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG GLG ++AL+ YS+ +++A++VFD + D + NS ISG+ G+
Sbjct: 220 IHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGW 279
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS----FDSY-- 239
D+++ LF M G T++ ++ E VG+ +HG+ +KS +S
Sbjct: 280 HDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQS 339
Query: 240 ---DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV-TWSALITGYSQQGDYGKALYYFR 295
+ + S LV MY +C M SA VF+++ V W+ ++ GY++ ++ ++L F
Sbjct: 340 GIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFE 399
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+++ G D ++ +L + G V HGY+++ GF V +AL+ Y+K
Sbjct: 400 QMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSN 459
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + VF+ M ++ I++NSVI G +G +A E F + +G D +T ++L
Sbjct: 460 MIDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDSTTLLSVLP 519
Query: 416 AC 417
AC
Sbjct: 520 AC 521
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 163/345 (47%), Gaps = 30/345 (8%)
Query: 106 TYACITRACSENSDLPGLRFVH-------GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+Y + + C E L R H GG I S LG+ LV AY K + A
Sbjct: 96 SYCAVVQLCGEERSLEAARRAHALVRAGTGGIIGSVLGKR------LVLAYLKCGDLGGA 149
Query: 159 IKVFDGVSD--PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
VFD + D+ + S++S +A G + + + LF M G +PD + + ++ +
Sbjct: 150 RMVFDEMPPRVADVRVWTSLMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIA 209
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
++ G+ IHG K V++ L+++Y+RC CM A VF+S+ D ++W++
Sbjct: 210 SLGSITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSMHARDAISWNS 269
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
I+GY G + +A+ F K+ +G + V + SVL A A+ G V+HGY ++ G
Sbjct: 270 TISGYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSG 329
Query: 337 F---------ELSVMVSSALVDMYSKCGYLGLGIQVFETM-SERNIITYNSVILGLGLHG 386
+ + S LV MY KCG +G +VF+ M S+ N+ +N ++ G
Sbjct: 330 LLWDLESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAA 389
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALL-C----ACCHGGLVNDG 426
++ F + E G+ PDE S LL C +C GLV G
Sbjct: 390 EFEESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHG 434
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 183/392 (46%), Gaps = 5/392 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H K L+ + A L+ +Y+ + S +F Q++V W ++I +Y A
Sbjct: 533 VHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWTAMITSYTRAGL 592
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F+ L + ++ +KPD F + + + L + VHG AI +G+ + ++A
Sbjct: 593 FDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDESLKQGKSVHGYAIRNGMEKLLPVANA 652
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y ++EA VFD V++ D++ N++I G++ F ++S LF ML L P+
Sbjct: 653 LMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGGYSRNNFANESFSLFSDML-LQFKPN 711
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+ ++ + S L G+ IH + L+ F Y S+ LV MY +C + A +F+
Sbjct: 712 TVTMTCILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFD 771
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L +L++W+ +I GY G A+ F ++ G + D +++L A S
Sbjct: 772 RLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYACCHSGLTAE 831
Query: 325 G-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGL 382
G + ++ E + + +VD+ S G L + E+M E + + S++ G
Sbjct: 832 GWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLKEAFEFIESMPIEPDSSIWVSLLHGC 891
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+H A E D + K L P+ + + LL
Sbjct: 892 RIHRDVKLA-EKVADRVFK-LEPENTGYYVLL 921
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 11/270 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL + K +H + + + A L+ +Y + AR++FD + + WN++I
Sbjct: 626 ESLKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLI 685
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + N++ SLF ++L Q KP+ T CI A + S L R +H A+ G
Sbjct: 686 GGYSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFL 744
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
DS TS+ALV Y K + A +FD ++ +L+ MI+G+ G ++ LF+ M
Sbjct: 745 EDSYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQM 804
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-----FCLKSSFDSYDYVSSVLVSMYA 251
G PD + ++ L + G + ++ Y + +V + +
Sbjct: 805 RGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHY----TCIVDLLS 860
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
+ A+ S+ PD W +L+ G
Sbjct: 861 HTGNLKEAFEFIESMPIEPDSSIWVSLLHG 890
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S SL R +E+HA + L D + + LV +Y L AR+LFD+ +++
Sbjct: 718 ILPAVASISSLERGREIHAYALRRGFLEDSYTSNALVDMYVKCGALLVARVLFDRLTKKN 777
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
+ W +I Y + DA +LF+ + + ++PD +++ I AC
Sbjct: 778 LISWTIMIAGYGMHGCGKDAVALFEQMRGSGVEPDTASFSAILYAC 823
>gi|14587213|dbj|BAB61147.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125570436|gb|EAZ11951.1| hypothetical protein OsJ_01824 [Oryza sativa Japonica Group]
Length = 735
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 278/526 (52%), Gaps = 2/526 (0%)
Query: 26 HALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
HAL K S + + + T L+ +Y ++ AR +FD PQR+ F W++++ YA
Sbjct: 140 HALACKIPSAVSNVYVCTSLLNMYCKLGIVSDARRVFDGMPQRNSFSWSTMVAGYAAEKC 199
Query: 85 FNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A LF+ +L + F + A S L +HG + GL +
Sbjct: 200 SEEAFDLFRLMLEECPSEKSEFVATAVLSAVSVPLGLLMGEQMHGLIVKDGLLDFVSVEN 259
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+LVT Y+K + A VF+ + + + ++MI+G+A G D ++ +F M G TP
Sbjct: 260 SLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQNGEADSAVSMFSQMHAAGFTP 319
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
E+T VG+++ + L+VG+ HG +K F+ YV S LV MYA+C C+ A F
Sbjct: 320 TEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGF 379
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L+ D+V W+A+++G+ Q G++ +AL + +++ +G IAS L A A A +
Sbjct: 380 DQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALE 439
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
PG +H ++++G L V SAL MYSKCG L G+ VF + +R++I +NS+I G
Sbjct: 440 PGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFS 499
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+G A + F ++ +G PD TF +LCAC H GLV+ G E F+ MT++YG+ +
Sbjct: 500 QNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLVDRGWEYFSLMTKDYGLTPRL 559
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
+HY MV +L AG L+EA FI S+ + +L C + D+ +L E
Sbjct: 560 DHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGERLME 619
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ ++LSN YA +W+DV ++R + G+ K+ G SWV
Sbjct: 620 LGTGDSSAYILLSNIYASQRKWNDVERVRHLMRLRGVNKDPGCSWV 665
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 165/360 (45%), Gaps = 1/360 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L+ K LL LV +YA + +A +F+ + +R+ W+++I YA
Sbjct: 240 EQMHGLIVKDGLLDFVSVENSLVTMYAKAGCMGAAFHVFESSRERNSITWSAMITGYAQN 299
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A S+F + P FT+ + A S+ L + HG + G
Sbjct: 300 GEADSAVSMFSQMHAAGFTPTEFTFVGVLNASSDLGALAVGKQAHGLMVKLGFEVQIYVK 359
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y+K I +A + FD + + D+VL +M+SG G +++L L+ M + G
Sbjct: 360 SALVDMYAKCGCIADAKEGFDQLYEVDIVLWTAMVSGHVQNGEHEEALTLYARMDKEGII 419
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P + T+ + + L G+ +H +K V S L +MY++C + V
Sbjct: 420 PSKSTIASGLRACAGIAALEPGKQLHTQIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSV 479
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D++ W+++I+G+SQ G AL F ++ M+G D + ++L A + V
Sbjct: 480 FRRIPDRDVIAWNSIISGFSQNGCGNGALDLFEEMKMEGTIPDNITFINILCACSHMGLV 539
Query: 323 WPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G + + +G + + +VD+ S+ G L E+++ + ++LG
Sbjct: 540 DRGWEYFSLMTKDYGLTPRLDHYACMVDILSRAGMLKEAKDFIESITIDHGTCLWRIVLG 599
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L+ K+ H L+ K + + LV +YA + A+ FD+ +
Sbjct: 327 VLNASSDLGALAVGKQAHGLMVKLGFEVQIYVKSALVDMYAKCGCIADAKEGFDQLYEVD 386
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ LW +++ + +A +L+ + + + P T A RAC+ + L + +H
Sbjct: 387 IVLWTAMVSGHVQNGEHEEALTLYARMDKEGIIPSKSTIASGLRACAGIAALEPGKQLHT 446
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GLG + SAL T YSK +++ + VF + D D++ NS+ISGF+ G +
Sbjct: 447 QIVKYGLGLGAPVGSALSTMYSKCGNLEDGMSVFRRIPDRDVIAWNSIISGFSQNGCGNG 506
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI 212
+L LF+ M G PD T + ++
Sbjct: 507 ALDLFEEMKMEGTIPDNITFINIL 530
>gi|357128207|ref|XP_003565766.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Brachypodium distachyon]
Length = 734
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 275/527 (52%), Gaps = 2/527 (0%)
Query: 25 LHALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+HAL K S + F +T L+ +Y ++P A+++FD+ P R+ W +++ YA
Sbjct: 139 VHALACKLPSASSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARK 198
Query: 84 RFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF+ +L L + F + A S LP VHG + G+
Sbjct: 199 CSQEAFELFRQMLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVE 258
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LVT Y+K +D A VF+ + + + ++MI+G++ G + ++++F M G
Sbjct: 259 NSLVTMYAKAGCMDAAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFP 318
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P E+TLVG+++ + L G+ HG +K F+ YV S LV MYA+C C+ A
Sbjct: 319 PTEFTLVGVLNACSDVGTLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKEC 378
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN D+V W+A++TG+ Q G++ +AL + +++ +G + + I S+L A A A +
Sbjct: 379 FNQFSELDIVLWTAMVTGHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAAL 438
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
PG +H +++ GF L V SAL MYSKCG L G+ VF M R++I +NS+I G
Sbjct: 439 EPGKQLHTQILKFGFGLGASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGF 498
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+G A F ++ +G PD TF +LCAC H GLV+ G F M ++YG+ +
Sbjct: 499 SQNGRGNDAINLFEEMKLEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPR 558
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY MV +L AG L EA FI S+ + +L C + D+ +L
Sbjct: 559 LDHYACMVDILSRAGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLM 618
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ A ++LSN YA +W+DV ++R + G+ K+ G SWV
Sbjct: 619 DLGTGDSAAYILLSNIYAAQRKWNDVERVRYLMKLVGVSKDPGCSWV 665
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 161/349 (46%), Gaps = 12/349 (3%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLS--LIDEAIKVFDGV--SDPDLVLCNSMISGFA 181
+H A+ SG + S++L+T YS + A VF + + D+ NS+++ +
Sbjct: 34 LHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLNPLS 93
Query: 182 HCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSFDSY 239
H +L F ML P ++ + S G +H C S S
Sbjct: 94 HHRPL-AALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSASSN 152
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+VS+ L++MY + + A VF+ + H + V+W+A++ GY+ + +A FR++
Sbjct: 153 VFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQMLG 212
Query: 300 QGKKADPVLIAS-VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+ +A+ VL+A + + G +HG V++ G V V ++LV MY+K G +
Sbjct: 213 ECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDGMVGFVSVENSLVTMYAKAGCMD 272
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
VFE+ ERN IT++++I G +G A F + G P E T +L AC
Sbjct: 273 AAFHVFESSKERNSITWSAMITGYSQNGNAESAVRMFSQMHAAGFPPTEFTLVGVLNACS 332
Query: 419 HGGLVNDGRE---IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
G + +G++ + ++ E + K+ + M G G+ +E ++
Sbjct: 333 DVGTLMEGKQAHGLMVKLGFEVQVYVKSA-LVDMYAKCGCIGDAKECFN 380
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 131/309 (42%), Gaps = 12/309 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K+ H L+ K + + LV +YA + A+ F++ + + LW +++
Sbjct: 336 TLMEGKQAHGLMVKLGFEVQVYVKSALVDMYAKCGCIGDAKECFNQFSELDIVLWTAMVT 395
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ F A L+ + + + P+ T + RAC+ + L + +H + G G
Sbjct: 396 GHVQNGEFEQALMLYARMDKEGVFPNTLTITSLLRACAGLAALEPGKQLHTQILKFGFGL 455
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ SAL T YSK +++ + VF + D++ NS+ISGF+ G + ++ LF+ M
Sbjct: 456 GASVGSALSTMYSKCGNLEDGMVVFRRMPHRDVIAWNSIISGFSQNGRGNDAINLFEEMK 515
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
G PD T + ++ L+ G I + L D Y + +V + +R
Sbjct: 516 LEGTAPDPVTFINVLCACSHMGLVDRGWTYFRSMIKDYGLTPRLDHY----ACMVDILSR 571
Query: 253 CNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLN--MQGKKADPVLI 309
++ A S+ W ++ D+ Y KL G A +L+
Sbjct: 572 AGMLSEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEKLMDLGTGDSAAYILL 631
Query: 310 ASVLAAAAK 318
+++ AA K
Sbjct: 632 SNIYAAQRK 640
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 108/221 (48%), Gaps = 19/221 (8%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCN--CMNSAYHVFNSLFHP--DLVTWSALIT 279
G+ +H + LKS S+ VS+ L++ Y+ + +A+ VF + D+ +W++L+
Sbjct: 31 GEALHAWALKSGSSSHAPVSNSLITFYSSFPRLFLPAAFAVFADIPAAARDVASWNSLLN 90
Query: 280 GYSQQGDYGKALYYFRK-LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGF 337
S AL +FR L+ P A+ AAA++ + GAV+H +
Sbjct: 91 PLSHHRPLA-ALSHFRSMLSSSTILPSPHSFAAAFTAAARAHSASAGAVVHALACKLPSA 149
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+V VS+AL++MY K G + VF+ M RN +++ +++ G + +AFE FR
Sbjct: 150 SSNVFVSTALLNMYCKLGLIPDAQLVFDEMPHRNEVSWAAMVAGYAARKCSQEAFELFRQ 209
Query: 398 II-EKGLNPDESTFSALLCAC-----------CHGGLVNDG 426
++ E L+ +E +A+L A HG +V DG
Sbjct: 210 MLGECPLHKNEFVATAVLSAISVPLGLPMGVQVHGLVVKDG 250
>gi|357116286|ref|XP_003559913.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 692
Score = 293 bits (749), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 268/527 (50%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ + A V + + F LV ++A L AR +F+ +R + W ++I A
Sbjct: 166 ENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAVHA 225
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ DA SLF + D+ A + AC +L +HG A+ G+G D+ S
Sbjct: 226 GDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTCVS 285
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y K + A +VF + D+V +++I+G++ G S+ LF M+ G
Sbjct: 286 NALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAGLK 345
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T+ ++ L E L G+ IHGF L++ FD ++ S + Y+R + A V
Sbjct: 346 PNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAEIV 405
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+ DLV W++++ GY+ G+ AL FR L G + D V + SVL + +
Sbjct: 406 LELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHSRL 465
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H YV++H VS+AL+DMY KC L G ++F+ +++R+ TYN++I
Sbjct: 466 IQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRDTATYNTLISSF 525
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG +A F + G+ PD+ TF ALL +C H GL+ G + M ++Y I
Sbjct: 526 GKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCSHAGLIEKGLHFYDIMLQDYNISPG 585
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V L +G L++A+ F+ SL + V G LL C ++ D+AE+VA ++F
Sbjct: 586 KEHYSCVVDLYSRSGKLDDAWKFVSSLQDEAEIDVLGCLLGACRVHNRMDIAELVAKRIF 645
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E +P Y ++LSN YA G W V ++R I + L+ + G S +
Sbjct: 646 EQNPSDPGYHILLSNIYANAGMWSHVTRIRTMIENRSLKNKTGNSLI 692
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 145/519 (27%), Positives = 241/519 (46%), Gaps = 13/519 (2%)
Query: 8 LVLELSKSHQSLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L L +S +L+ + LHA L+ R A +LV YA A + D P
Sbjct: 45 LLLRL-RSCPTLAEARRLHAALLVGGHHRRGAVLAAQLVHAYARLGEAGRALSVLDGMPM 103
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRF 125
R+ F WN+ I+ + +F +A + ++R + D FTY + +AC+ + R
Sbjct: 104 RNSFAWNAAIKGLVDSGQFAEALETYWAMVRDGSVAADGFTYPPVIKACAALGVVEQGRM 163
Query: 126 VHGGA---IVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
V +V G+ S+ ALV ++K + EA VF+ + + DL +MI G
Sbjct: 164 VRENVEADVVRGVVAPSVFVQCALVDMFAKCGCLGEARSVFESMLERDLAAWTAMIGGAV 223
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
H G W ++ LF M G D + +I L G +HG ++
Sbjct: 224 HAGDWLDAMSLFSRMRSEGFLADSVIIATVIPACGRAKELRTGMVLHGCAVRCGVGDDTC 283
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
VS+ LV MY +C C+ A VF S+ D+V+WS LI GYSQ G ++ F ++ G
Sbjct: 284 VSNALVDMYCKCGCLGMADRVFWSIGFKDVVSWSTLIAGYSQNGKDHVSVNLFTEMVTAG 343
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
K + +AS+L + ++ G IHG+ +++GF+ S + SA +D YS+ G +
Sbjct: 344 LKPNSNTMASILPSLSEMKLFRHGKEIHGFSLRNGFDQSKFLGSAFIDFYSRQGSIREAE 403
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
V E M +R+++ +NS++ G ++G T A FR + + G PD T ++L C H
Sbjct: 404 IVLELMPKRDLVIWNSMVAGYAVNGNTDSALCAFRALQKVGFRPDHVTVVSVLPVCNHHS 463
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
+ G+E+ + Y + + ++ + LE+ I+ L D A L
Sbjct: 464 RLIQGKELHAYVVRHY-MSSVCSVSNALIDMYCKCCCLEKGKE-IFQLVTDRDTATYNTL 521
Query: 482 LSCCHIYGNSDLAEIVAHQLFEND---PRKGAYKVMLSN 517
+S +G+ D A I+ L + D P K + +LS+
Sbjct: 522 ISSFGKHGHEDEA-IMLFDLMKRDGIAPDKVTFVALLSS 559
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 27/173 (15%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + H L + KELHA V + + + L+ +Y L + +F R
Sbjct: 455 VLPVCNHHSRLIQGKELHAYVVRHYMSSVCSVSNALIDMYCKCCCLEKGKEIFQLVTDRD 514
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I ++ ++A LF + R + PD T+ + +CS H
Sbjct: 515 TATYNTLISSFGKHGHEDEAIMLFDLMKRDGIAPDKVTFVALLSSCS-----------HA 563
Query: 129 GAIVSGL--------------GRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
G I GL G++ S +V YS+ +D+A K + D
Sbjct: 564 GLIEKGLHFYDIMLQDYNISPGKEHY--SCVVDLYSRSGKLDDAWKFVSSLQD 614
>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
[Vitis vinifera]
Length = 781
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 168/513 (32%), Positives = 281/513 (54%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F + +V Y + + +AR +FD +R LWN+++ F++A +F +++
Sbjct: 140 DLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCFDEAILIFGDMV 199
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ + D+ T A + +E DL + A+ G + + L YSK I+
Sbjct: 200 KGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLACLYSKCGEIE 259
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +F + PDLV N+MISG+ + S++LF +L G+ + ++VGLI +
Sbjct: 260 TARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNSSSIVGLIPVFF 319
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
L + + IHGFC KS S VS+ L ++Y+R N + SA +F+ L +W+A
Sbjct: 320 PFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNA 379
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+GY+Q G KA+ F+++ + +PV + S+L+A A+ + G +H + +
Sbjct: 380 MISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRES 439
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
FE ++ VS+AL+DMY+KCG + ++F M E+N +T+N++I G GLHG+ ++A F
Sbjct: 440 FESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFN 499
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+++ ++P TF ++L AC H GLV +G EIF M ++G + EHY MV LLG A
Sbjct: 500 EMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRA 559
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
GNL++A FI +P P V GALL C I+ +++LA + + +LFE DP+ Y V+LS
Sbjct: 560 GNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDANLARLASDKLFELDPQNVGYYVLLS 619
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N Y+ + + +R + L K G + +
Sbjct: 620 NIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLI 652
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 131/468 (27%), Positives = 239/468 (51%), Gaps = 11/468 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L L L +L + + HA + L D TKL + + A +LF P
Sbjct: 12 LFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTIPNP 71
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFV 126
+FL+N +IRA++L + + A SL+ +L + T L+PDNFTYA + S L
Sbjct: 72 DLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLLLHAH 131
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
+IV+G G D SA+V Y K S + A KVFDG+ + D VL N+M+SG +
Sbjct: 132 ---SIVAGFGSDLFVGSAIVACYFKFSRVAAARKVFDGMLERDTVLWNTMVSGLVKNSCF 188
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
D+++ +F M++ G D T+ ++ G+ E L++G GI +K F S+ YV + L
Sbjct: 189 DEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGL 248
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+Y++C + +A +F + PDLV+++A+I+GY+ + ++ F++L + G+K +
Sbjct: 249 ACLYSKCGEIETARLLFGQIGQPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNS 308
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
I ++ ++ IHG+ + G + VS+AL +YS+ + +F+
Sbjct: 309 SSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDE 368
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
SE+++ ++N++I G +G T +A F+++ + + P+ T +++L AC G ++ G
Sbjct: 369 SSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLG 428
Query: 427 R---EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ ++ R + E I T ++ + G++ EA +P+
Sbjct: 429 KWVHDLINRESFESNIFVSTA----LIDMYAKCGSITEAQRLFSMMPE 472
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 2/262 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L T+ +H K+ ++ + +T L +Y+ N + SAR+LFD++ ++S+ WN++I
Sbjct: 324 LHLTRCIHGFCTKSGVVSNSSVSTALTTVYSRLNEIESARLLFDESSEKSLASWNAMISG 383
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
YA A SLF+ + + +++P+ T I AC++ L ++VH +
Sbjct: 384 YAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESN 443
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+AL+ Y+K I EA ++F + + + V N+MISG+ G+ ++L LF+ ML
Sbjct: 444 IFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLH 503
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGI-HGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+P T + ++ L+ G I F+ + +V + R ++
Sbjct: 504 SRVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAGNLD 563
Query: 258 SAYHVFNSL-FHPDLVTWSALI 278
A + P W AL+
Sbjct: 564 KALDFIRKMPVEPGPPVWGALL 585
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H L+ + S + F +T L+ +YA + A+ LF P+++ WN++I
Sbjct: 424 ALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNAVTWNAMIS 483
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y L ++A +LF +L +++ P T+ + ACS
Sbjct: 484 GYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACS 521
>gi|242084292|ref|XP_002442571.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
gi|241943264|gb|EES16409.1| hypothetical protein SORBIDRAFT_08g022230 [Sorghum bicolor]
Length = 698
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/531 (32%), Positives = 278/531 (52%), Gaps = 5/531 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L + K+ L+ + F A+ L+ +YA L AR +FD P R+ WN++I YA +
Sbjct: 116 QLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSWNALIAGYAESR 175
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ A LF + R +L PD+ T+A + S ++ +HG G + +
Sbjct: 176 KPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAKYGSALGLVVLN 235
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GKT 202
A +TAYS+ ++ ++FDG+ DL+ NSM+ +A+ G D++++ F M+R G
Sbjct: 236 AAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRFFVRMMRESGVQ 295
Query: 203 PDEYTLVGLISGLWEPSLLS-VGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--NCM-NS 258
PD Y+ ++S E G+ IH +K + +V + +++MY R NCM
Sbjct: 296 PDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMYTRFTENCMMED 355
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
AY F+SL D V+W++++TGYS G AL +FR + + D +++ L + +
Sbjct: 356 AYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDEFALSAALRSCSD 415
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G +H VIQ GF + VSS+L+ MYSKCG +G + FE + + + +NS+
Sbjct: 416 LAVLRLGRQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSM 475
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G HG + F ++++ + D TF ALL A HGGLV++G EI M Y
Sbjct: 476 MFGYAQHGQAQTVTDLFSEMLDHKVPLDHVTFVALLTAYSHGGLVDEGSEILNSMETRYK 535
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I + EHY V L G AG L++A I S+P D V LL C I+GN +LA VA
Sbjct: 536 IPLRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAMVWMTLLGACRIHGNMELASDVA 595
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
LF +PR+ + V+LS+ Y+ G W D ++ + + GL K G SW+
Sbjct: 596 SHLFVAEPRQHSTYVLLSSMYSGRGMWSDRATVQKVMKNRGLSKVPGWSWI 646
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 206/419 (49%), Gaps = 11/419 (2%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L +AR +FD+ P+ WNS++ A+ A DA L K++ L F R+
Sbjct: 45 LAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGLTASTFALGSALRS 104
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
+ + A+ SGL + ++SAL+ Y+K + +A +VFDG+ + V
Sbjct: 105 AAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARRVFDGMPVRNTVSW 164
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N++I+G+A ++++LF M R+ PD+ T L++ + PS S+ Q +HG K
Sbjct: 165 NALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSWYSLMQQLHGKIAK 224
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
V + ++ Y++C + +F+ + DL++W++++ Y+ G +A+ +
Sbjct: 225 YGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGAYAYHGMDDEAMRF 284
Query: 294 F-RKLNMQGKKADPVLIASVLAAAAKSA-NVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F R + G + D SV++ ++ + G IH V++ G E V +A++ MY
Sbjct: 285 FVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHSLVVKIGLEGVTHVCNAMIAMY 344
Query: 352 SK----CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
++ C + + F+++ ++ +++NS++ G HG + A FFR + + ++ DE
Sbjct: 345 TRFTENC-MMEDAYKCFDSLVFKDAVSWNSMLTGYSHHGLSSDALRFFRFMRAENVSTDE 403
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK---TEHYIYMVKLLGLAGNLEEAY 463
SA L +C ++ GR++ + + + G + + I+M G+ G+ +++
Sbjct: 404 FALSAALRSCSDLAVLRLGRQVHSLVIQS-GFSSNDFVSSSLIFMYSKCGMVGDARKSF 461
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 141/292 (48%), Gaps = 5/292 (1%)
Query: 145 LVTAYSKL---SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
L+TAYS S + A +VFD + PD V NS+++ G + +L M G
Sbjct: 32 LLTAYSASGPGSGLAAARRVFDEIPRPDAVSWNSLLAAHVAAGAHRDAWRLLKDMHARGL 91
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
T + L + +G + F +KS + +S L+ +YA+C ++ A
Sbjct: 92 TASTFALGSALRSAAAARRPELGAQLQSFAVKSGLVDNVFSASALLDVYAKCGRLSDARR 151
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+ + + V+W+ALI GY++ +A+ F ++ D A++LA +
Sbjct: 152 VFDGMPVRNTVSWNALIAGYAESRKPAQAMELFLEMQRVELVPDDATFAALLATVEGPSW 211
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+HG + ++G L ++V +A + YS+CG ++F+ + R++I++NS++
Sbjct: 212 YSLMQQLHGKIAKYGSALGLVVLNAAITAYSQCGAFADSRRIFDGIQSRDLISWNSMLGA 271
Query: 382 LGLHGFTYQAFEFF-RDIIEKGLNPDESTFSALLCACC-HGGLVNDGREIFT 431
HG +A FF R + E G+ PD +F++++ C HG GR I +
Sbjct: 272 YAYHGMDDEAMRFFVRMMRESGVQPDMYSFTSVVSVCSEHGCDDRQGRSIHS 323
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H+LV ++ + F ++ L+ +Y+ ++ AR F++ + S WNS++ YA
Sbjct: 423 RQVHSLVIQSGFSSNDFVSSSLIFMYSKCGMVGDARKSFEEADKGSSVPWNSMMFGYAQH 482
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+ LF +L ++ D+ T+ + A + HGG + G
Sbjct: 483 GQAQTVTDLFSEMLDHKVPLDHVTFVALLTA-----------YSHGGLVDEG 523
>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g30700-like [Cucumis sativus]
Length = 788
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 276/525 (52%), Gaps = 1/525 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA + + F + +V LY AR +FD P+R LWN++I ++
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F D+ +F ++L L D+ T A + A +E + + A GL D +
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTG 254
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ YSK + +FD + PDL+ N+MISG+ + ++ LF +L G+ +
Sbjct: 255 LISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVN 314
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TLVGLI + L + + I LK VS+ L ++Y R N + A +F+
Sbjct: 315 SSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFD 374
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L +W+A+I+GY+Q G +A+ F+++ M +PV + S+L+A A+ +
Sbjct: 375 ESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSI 433
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +HG + E +V VS+ALVDMY+KCG + Q+F+ M ++N++T+N++I G GL
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGL 493
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + F ++++ G+ P TF ++L AC H GLV++G EIF M YG Q +E
Sbjct: 494 HGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV +LG AG L A FI +P PAV GALL C I+ N+++A + + +LF+
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL 613
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP Y V+LSN Y+ D + +R + L K G + +
Sbjct: 614 DPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 216/419 (51%), Gaps = 2/419 (0%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L L + +LS+ ++ A + + D TKL + + R LF+K + +
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHG 128
FL+N +IR ++ + L+ +L + T L+PDNFTYA A S D +H
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+IV G+ + SA+V Y K + + A KVFD + + D VL N+MISGF+ +++
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S+++F ML +G + D TL +++ + E +G GI K S YV + L+S
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+Y++C +F+ + PDL++++A+I+GY+ + A+ FR+L G++ +
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ ++ ++ +I ++ G L VS+AL +Y + + Q+F+
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E+++ ++N++I G +G T +A F++++ + L+P+ T +++L AC G ++ G+
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGK 435
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H L+ L + + +T LV +YA + AR LFD ++V WN++I
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMIT 489
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
Y L +A LF +L++ + P T+ I ACS +
Sbjct: 490 GYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHS 529
>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g30700-like [Cucumis sativus]
Length = 788
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 173/525 (32%), Positives = 276/525 (52%), Gaps = 1/525 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA + + F + +V LY AR +FD P+R LWN++I ++
Sbjct: 135 LHAHSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSY 194
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F D+ +F ++L L D+ T A + A +E + + A GL D +
Sbjct: 195 FEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTG 254
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ YSK + +FD + PDL+ N+MISG+ + ++ LF +L G+ +
Sbjct: 255 LISLYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVN 314
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TLVGLI + L + + I LK VS+ L ++Y R N + A +F+
Sbjct: 315 SSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFD 374
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L +W+A+I+GY+Q G +A+ F+++ M +PV + S+L+A A+ +
Sbjct: 375 ESPEKSLASWNAMISGYTQNGLTDRAISLFQEM-MPQLSPNPVTVTSILSACAQLGALSI 433
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +HG + E +V VS+ALVDMY+KCG + Q+F+ M ++N++T+N++I G GL
Sbjct: 434 GKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMITGYGL 493
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + F ++++ G+ P TF ++L AC H GLV++G EIF M YG Q +E
Sbjct: 494 HGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGFQPMSE 553
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV +LG AG L A FI +P PAV GALL C I+ N+++A + + +LF+
Sbjct: 554 HYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNTEMANVASKRLFQL 613
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP Y V+LSN Y+ D + +R + L K G + +
Sbjct: 614 DPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLI 658
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 216/419 (51%), Gaps = 2/419 (0%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L L + +LS+ ++ A + + D TKL + + R LF+K + +
Sbjct: 18 LTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQLFNKVSKPDL 77
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHG 128
FL+N +IR ++ + L+ +L + T L+PDNFTYA A S D +H
Sbjct: 78 FLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHA 137
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+IV G+ + SA+V Y K + + A KVFD + + D VL N+MISGF+ +++
Sbjct: 138 HSIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMPERDTVLWNTMISGFSRNSYFED 197
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S+++F ML +G + D TL +++ + E +G GI K S YV + L+S
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGLHSDVYVLTGLIS 257
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+Y++C +F+ + PDL++++A+I+GY+ + A+ FR+L G++ +
Sbjct: 258 LYSKCGKSCKGRILFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNSST 317
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ ++ ++ +I ++ G L VS+AL +Y + + Q+F+
Sbjct: 318 LVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRLNEVQFARQLFDESP 377
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E+++ ++N++I G +G T +A F++++ + L+P+ T +++L AC G ++ G+
Sbjct: 378 EKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTSILSACAQLGALSIGK 435
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 51/100 (51%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H L+ L + + +T LV +YA + AR LFD ++V WN++I
Sbjct: 430 ALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMIT 489
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
Y L +A LF +L++ + P T+ I ACS +
Sbjct: 490 GYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHS 529
>gi|297743088|emb|CBI35955.3| unnamed protein product [Vitis vinifera]
Length = 708
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 320/628 (50%), Gaps = 87/628 (13%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
FFN L+ + SKSH S +++H+ + R F A ++V +YA ++ A+ +F
Sbjct: 36 FFN--DLLQQCSKSHLS----QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 89
Query: 62 DKTPQR---SVFLWNSIIRAYALAHRF-NDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+ +P ++ LWNSI+RA +AH + +A ++ + + + D FT+ + RAC+
Sbjct: 90 EVSPIECFSNLLLWNSILRA-NVAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALM 148
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS----------- 166
R VHG + G + + L+ Y K+ +D+A KVF+ ++
Sbjct: 149 GSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMV 208
Query: 167 ------------------------DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+P+LV S++S A CG ++++LF M G
Sbjct: 209 SGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIG 268
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
L ++S + + G+ IHG+ +K F++Y +V + L+ +Y + +N+A +
Sbjct: 269 ATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARIL 328
Query: 263 F-----------NSLF----------------------------HPDLVTWSALITGYSQ 283
F N+L P++V+WSA+I G++
Sbjct: 329 FLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFAS 388
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+G +AL FR++ + KA+ V IASVL+ A+ A + G IHG+V++ + +++V
Sbjct: 389 KGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILV 448
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
+ L++MY+K G G VFE + +++I++N+++ G G+HG A F +I+ G
Sbjct: 449 GNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGF 508
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
PD TF A+L AC H GLV +GRE+F +M +E+ ++ + EHY MV LLG AG L+EA
Sbjct: 509 EPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEAS 568
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE-NDPRKGAYKVMLSNTYAED 522
+ S+P + V GALL+ C ++ N+++AE A Q+F N G+Y ++LSN YA
Sbjct: 569 KVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY-MLLSNIYAAS 627
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
GRW+D K+R GL+K G SW+
Sbjct: 628 GRWEDSAKVRISAKTKGLKKTPGQSWIQ 655
>gi|224090525|ref|XP_002309013.1| predicted protein [Populus trichocarpa]
gi|222854989|gb|EEE92536.1| predicted protein [Populus trichocarpa]
Length = 583
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 175/544 (32%), Positives = 284/544 (52%), Gaps = 5/544 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+ + SK+ ++L + LHA+ K + D + ++ LYA L AR +FD+ +R
Sbjct: 9 LIHQCSKT-KALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFDEMSER 67
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
++ W+++I Y A LF L + P+ + YA + AC+ L + +H
Sbjct: 68 NLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQGKQIH 124
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G A+ GL S S+AL+T Y K +A+ ++ + + V N++I+GF D
Sbjct: 125 GQALKFGLDSVSFVSNALITMYMKCGKCSDALLAYNEALELNPVAYNALITGFVENQQPD 184
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K ++ M + G PD +T VGL+ L G+ +H +K +S ++ ++++
Sbjct: 185 KGFEVLRMMYQDGFFPDRFTFVGLLGTCNSRDDLKRGELLHCQTIKLKLNSTAFIGNLII 244
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKADP 306
+MY++ N + A F S+ DL++W+ I+ S D+ KAL F++ LN + D
Sbjct: 245 TMYSKLNLLEEAEKAFRSIEEKDLISWNTFISSCSHCNDHEKALEAFKEMLNECRVRPDE 304
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
AS LAA + A++ G IHG++I+ V +AL++MY+KCG + +F
Sbjct: 305 FTFASALAACSGLASMCNGKQIHGHLIRTRLYQDVGAGNALINMYAKCGCIAKAYYIFSK 364
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M +N++++N++I G G HGF +AFE F + G+ PD TF LL A H GLV++G
Sbjct: 365 MEHQNLVSWNTMIAGFGNHGFGGKAFELFAKMKTMGVKPDSVTFVGLLTASNHAGLVDEG 424
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
F M E YGI + EH+ ++ LLG AG L EA ++ P D V G+LLS C
Sbjct: 425 LVYFNSMEETYGISPEIEHFSCLIDLLGRAGRLNEAKEYMKKFPFGHDTVVLGSLLSACR 484
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++G+ D + A QL + P + V+LSN YA D WD V + + +GL+KE G
Sbjct: 485 LHGDVDTGKCFARQLLKLQPATTSPYVLLSNLYASDEMWDGVAEAWKLLKGSGLKKEPGH 544
Query: 547 SWVS 550
S +
Sbjct: 545 SLIE 548
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
P L+ S++ +K+ + G +H I+ V+VS+ ++++Y+KC L QVF+
Sbjct: 3 PELVGSLIHQCSKTKALRQGLPLHAIAIKTATRSDVIVSNHILNLYAKCRKLREARQVFD 62
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH-GGLVN 424
MSERN+++++++I G G A F + + P+E +++++ AC GLV
Sbjct: 63 EMSERNLVSWSAMISGYEQIGEPISALGLFSKL---NIVPNEYVYASVISACASLKGLVQ 119
Query: 425 DGREI 429
G++I
Sbjct: 120 -GKQI 123
>gi|359482518|ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
Length = 1753
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 189/627 (30%), Positives = 320/627 (51%), Gaps = 87/627 (13%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
FFN L+ + SKSH S +++H+ + R F A ++V +YA ++ A+ +F
Sbjct: 874 FFN--DLLQQCSKSHLS----QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 927
Query: 62 DKTPQR---SVFLWNSIIRAYALAHRF-NDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+ +P ++ LWNSI+RA +AH + +A ++ + + + D FT+ + RAC+
Sbjct: 928 EVSPIECFSNLLLWNSILRAN-VAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALM 986
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS----------- 166
R VHG + G + + L+ Y K+ +D+A KVF+ ++
Sbjct: 987 GSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMV 1046
Query: 167 ------------------------DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+P+LV S++S A CG ++++LF M G
Sbjct: 1047 SGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIG 1106
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
L ++S + + G+ IHG+ +K F++Y +V + L+ +Y + +N+A +
Sbjct: 1107 ATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARIL 1166
Query: 263 F-----------NSLF----------------------------HPDLVTWSALITGYSQ 283
F N+L P++V+WSA+I G++
Sbjct: 1167 FLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFAS 1226
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+G +AL FR++ + KA+ V IASVL+ A+ A + G IHG+V++ + +++V
Sbjct: 1227 KGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILV 1286
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
+ L++MY+K G G VFE + +++I++N+++ G G+HG A F +I+ G
Sbjct: 1287 GNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGF 1346
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
PD TF A+L AC H GLV +GRE+F +M +E+ ++ + EHY MV LLG AG L+EA
Sbjct: 1347 EPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEAS 1406
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE-NDPRKGAYKVMLSNTYAED 522
+ S+P + V GALL+ C ++ N+++AE A Q+F N G+Y ++LSN YA
Sbjct: 1407 KVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY-MLLSNIYAAS 1465
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWV 549
GRW+D K+R GL+K G SW+
Sbjct: 1466 GRWEDSAKVRISAKTKGLKKTPGQSWI 1492
>gi|297743099|emb|CBI35966.3| unnamed protein product [Vitis vinifera]
Length = 624
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 177/578 (30%), Positives = 302/578 (52%), Gaps = 40/578 (6%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L L ++ SL++ ++HA L KL+ L++++ AR + D+TP
Sbjct: 1 MLLSLLRTATSLTQIHQIHAQTLIHGLPLQTHLIPKLIDLHSID----YARFVLDQTPSP 56
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ F WNS+IRAY + ++ L+ +LR+ KP NFT+ + +ACS + +H
Sbjct: 57 TDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKPSNFTFPFVLKACSTLGSVLEGEQIH 116
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ G G D ++L+ Y K +D A +D + D V NS+ISG+ G +
Sbjct: 117 THVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDDMGFRDEVSWNSIISGYVQWGQVE 176
Query: 188 KSLQLFD----------W---------------MLRLGKT---------PDEYTLVGLIS 213
K+ LF+ W ML L + P+ T+V L+S
Sbjct: 177 KARDLFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQMLVSADEVQPNAATMVCLLS 236
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
VG+ + F + + + L+ MY++C + A+ +F+ + +L +
Sbjct: 237 ACSTLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFDGVSCKNLPS 296
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+A+ITG Q G +A+ +R + Q K + + + +VL+A A + G +H Y+
Sbjct: 297 WNAIITGCVQGGLLEEAIDLYRHMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLG 356
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
++G +L+V++++ALVDMY+KCG + +F SE+++ +N++ILGL HG +
Sbjct: 357 RNGLDLNVILATALVDMYAKCGKIDDACLIFVKTSEKDVALWNAMILGLAYHGDGRDSLA 416
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F ++ G+ P++ TF +L AC H GLV +GR F+ M +++G+ K EHY MV LL
Sbjct: 417 VFSQMVRAGVQPNDVTFIGVLSACNHSGLVEEGRVQFSSMADKHGLSPKLEHYACMVDLL 476
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF-ENDPRKGAYK 512
G AG+L+EAY + ++ P D + GALLS C I+ N +LA+ ++ + DP G +
Sbjct: 477 GRAGHLKEAYELVQNMLIPPDSIIWGALLSACRIHRNLELADKISETIMASQDPNIG-FC 535
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
++LSN YA GRW DV ++R + + ++K +G SWV
Sbjct: 536 ILLSNIYASSGRWKDVARVRRQVKEKRIKKPSGCSWVE 573
>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
Length = 824
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 175/537 (32%), Positives = 285/537 (53%), Gaps = 7/537 (1%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ ++++ ++H L K + D + A L+ LY + +ARILFD+ P R + WN
Sbjct: 161 KACRNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWN 220
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I Y + +A +L L D+ T + AC+E D +H +I
Sbjct: 221 AMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL + S+ L+ Y++ + + KVFD + DL+ NS+I + +++ LF
Sbjct: 277 GLESELFVSNKLIDLYAEFGSLKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLF 336
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYAR 252
M PD TL+ L S L + + + + GF L+ + D + + +V MYA+
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK--ADPVLIA 310
++SA VFN L + D+++W+ +I+GY+Q G +A+ + + +G + A+
Sbjct: 397 LGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWV 456
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SVL A +++ + G +HG ++++G L V V ++L DMY KCG L + +F +
Sbjct: 457 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRV 516
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
N + +N++I G HG +A F++++++G+ PD TF LL AC H GLV++G F
Sbjct: 517 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWCF 576
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M +YGI +HY MV L G AG LE A +FI S+P D ++ GALLS C ++GN
Sbjct: 577 EMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSACRVHGN 636
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
DL +I + LFE +P Y V+LSN YA G+W+ V ++R GLRK G S
Sbjct: 637 VDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLRKTPGWS 693
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 253/518 (48%), Gaps = 19/518 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K LHA + ++ +++ + KLV LY + AR FD R V+ WN +I
Sbjct: 66 NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMIS 125
Query: 78 AYALAHRFNDAKSLFK-NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y A ++ F +L + L+PD T+ + +AC +D G + +H A+ G
Sbjct: 126 GYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRNVTD--GNK-IHCLALKFGFM 182
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +++L+ Y + + A +FD + D+ N+MISG+ G ++L L D +
Sbjct: 183 WDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDGL 242
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ D T+V L+S E + G IH + +K +S +VS+ L+ +YA +
Sbjct: 243 ----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGSL 298
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
VF+ ++ DL++W+++I Y +A+ F+++ + + D + + S+ +
Sbjct: 299 KDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASIL 358
Query: 317 AKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
++ + + G+ ++ G+ L + + +A+V MY+K G + VF + +++I++
Sbjct: 359 SQLGEIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNKDVISW 418
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVNDGREIFTRM 433
N++I G +GF +A E + + E+G ++ ++ T+ ++L AC G + G ++ R+
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRL 478
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+ G+ + + G G L++A S + +P+ V+ L++C +G+ +
Sbjct: 479 LKN-GLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPR-VNSVPWNTLIACHGFHGHGEK 536
Query: 494 AEIVAHQLFEN--DPRKGAYKVMLS----NTYAEDGRW 525
A ++ ++ + P + +LS + ++G W
Sbjct: 537 AVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEW 574
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 151/297 (50%), Gaps = 8/297 (2%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
++L + +H +VS ++ S+ LV Y L + A FD + + D+ N MI
Sbjct: 65 TNLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNVALARYTFDHIHNRDVYAWNLMI 124
Query: 178 SGFAHCGFWDKSLQLFD-WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
SG+ G+ + ++ F +ML G PD T ++ ++ G IH LK F
Sbjct: 125 SGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLKACRN---VTDGNKIHCLALKFGF 181
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
YV++ L+ +Y R + +A +F+ + D+ +W+A+I+GY Q G+ +AL
Sbjct: 182 MWDVYVAASLIHLYCRYGAVVNARILFDEMPTRDMGSWNAMISGYCQSGNAKEALTLSDG 241
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
L + D V + S+L+A ++ + G IH Y I+HG E + VS+ L+D+Y++ G
Sbjct: 242 L----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGS 297
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
L +VF+ M R++I++NS+I L+ +A F+++ + PD T +L
Sbjct: 298 LKDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISL 354
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L + +LH + K L D F T L +Y L A LF + P+ +
Sbjct: 458 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDALSLFYQIPRVN 517
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
WN++I + A LFK +L +KPD+ T+ + ACS +
Sbjct: 518 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 566
>gi|218188593|gb|EEC71020.1| hypothetical protein OsI_02714 [Oryza sativa Indica Group]
Length = 825
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 173/540 (32%), Positives = 281/540 (52%), Gaps = 7/540 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L L+KS Q++ H LV K L D L+ +Y+ A +F + + V
Sbjct: 275 LGLAKSGQAV------HGLVIKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDV 328
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
+ +I + +A +F + +KP+ +T+ + S D+ R +H
Sbjct: 329 VHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAH 388
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ SG R A+V Y K + +AI FD + PD+ N+++SGF +
Sbjct: 389 IVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQGPDIASWNTLLSGFYSGNNCEHG 448
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L++F ++ G ++YT VG++ L G +H LKS F VS +L+ M
Sbjct: 449 LRIFKELICEGVLANKYTYVGILRCCTSLMDLRFGCQVHACVLKSGFQGDYDVSKMLLDM 508
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y + C +A VF+ L D+ +W+ +++ Y++ + KA+ FR + + K+ + +
Sbjct: 509 YVQAGCFTNARLVFDRLKERDVFSWTVVMSTYAKTDEGEKAIECFRSMLRENKRPNDATL 568
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
A+ L+ + A + G +H Y I+ G+ SV VSSALVDMY KCG L +F+
Sbjct: 569 ATSLSVCSDLACLGSGLQLHSYTIKSGWNSSV-VSSALVDMYVKCGNLADAEMLFDESDT 627
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++ +N++I G HG Y+A E F+++I++G PDE TF +L AC H GL+++GR
Sbjct: 628 HDLVEWNTIICGYAQHGHGYKALEAFQEMIDEGNVPDEITFVGVLSACSHAGLLDEGRRY 687
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F ++ YGI EHY MV +L AG L EA S I +P D ++ +L C ++G
Sbjct: 688 FKLLSSVYGITPTLEHYACMVDILAKAGKLAEAESLINEMPLTPDASLWKTILGACRMHG 747
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N ++AE A +LFE+ P + ++LSN YA+ RW+DV KLR +VD G++KE G SW+
Sbjct: 748 NIEIAERAAEKLFESQPDDISSCILLSNIYADLKRWNDVAKLRSMLVDRGVKKEPGCSWI 807
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 186/397 (46%), Gaps = 2/397 (0%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
T ++HA K L DP+ ++ LV Y + V + R L D +P RS WN+++ YA
Sbjct: 180 TPQVHAQAVKLEGLFDPYVSSSLVEAYVSCGEVDVAERALLD-SPVRSDVSWNALLNEYA 238
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+ +F L+ + + +T + + C E + VHG I GL D +
Sbjct: 239 RDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRV 298
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++ L+ YSK ++A +VF + +PD+V C+ MIS F ++ +F M +G
Sbjct: 299 LNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMG 358
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P++YT VGL +++ + IH +KS F V +V MY + + A
Sbjct: 359 VKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAI 418
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
F+ + PD+ +W+ L++G+ + L F++L +G A+ +L
Sbjct: 419 LAFDLMQGPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCCTSLM 478
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G +H V++ GF+ VS L+DMY + G VF+ + ER++ ++ V+
Sbjct: 479 DLRFGCQVHACVLKSGFQGDYDVSKMLLDMYVQAGCFTNARLVFDRLKERDVFSWTVVMS 538
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+A E FR ++ + P+++T + L C
Sbjct: 539 TYAKTDEGEKAIECFRSMLRENKRPNDATLATSLSVC 575
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 192/409 (46%), Gaps = 2/409 (0%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+ + ++L R K LHA + ++ D F L+ +Y L AR +FD P R V
Sbjct: 67 LQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRLADARSVFDGMPHRDV 126
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
W +++ A A A LF + + P+ F A +AC+ SDL VH
Sbjct: 127 VAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKACTVGSDLGFTPQVHAQ 186
Query: 130 AI-VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ + GL D SS+LV AY +D A + V N++++ +A G + K
Sbjct: 187 AVKLEGL-FDPYVSSSLVEAYVSCGEVDVAERALLDSPVRSDVSWNALLNEYARDGDYAK 245
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +FD ++ G +YTL ++ E L GQ +HG +K ++ +++ L+
Sbjct: 246 VMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLVIKRGLETDRVLNNCLIE 305
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C AY VF + PD+V S +I+ + + +A F +++ G K +
Sbjct: 306 MYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAFDIFMQMSDMGVKPNQYT 365
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ A+++ +V IH ++++ GF + V A+V MY K G + I F+ M
Sbjct: 366 FVGLAIVASRTGDVNLCRSIHAHIVKSGFSRTKGVCDAIVGMYVKTGAVQDAILAFDLMQ 425
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+I ++N+++ G F+++I +G+ ++ T+ +L C
Sbjct: 426 GPDIASWNTLLSGFYSGNNCEHGLRIFKELICEGVLANKYTYVGILRCC 474
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 157/343 (45%), Gaps = 7/343 (2%)
Query: 97 RTQLKPDNF-TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R +L+ + +YA + C+ + L + +H + SG D+ +L+ Y K +
Sbjct: 52 RLRLRAEELRSYAAALQGCAASRALRRGKALHARLLRSGPRPDAFLHDSLLNMYCKCGRL 111
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A VFDG+ D+V +M+S G +L+LF M G P+ + L +
Sbjct: 112 ADARSVFDGMPHRDVVAWTAMVSAITAAGDAGAALRLFAEMSEEGVVPNGFALAAALKAC 171
Query: 216 WEPSLLSVGQGIHGFCLKSS--FDSYDYVSSVLVSMYARCNCMNSAYH-VFNSLFHPDLV 272
S L +H +K FD Y VSS LV Y C ++ A + +S D V
Sbjct: 172 TVGSDLGFTPQVHAQAVKLEGLFDPY--VSSSLVEAYVSCGEVDVAERALLDSPVRSD-V 228
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W+AL+ Y++ GDY K + F KL G + + +VL + G +HG V
Sbjct: 229 SWNALLNEYARDGDYAKVMLVFDKLVESGDEISKYTLPTVLKCCMELGLAKSGQAVHGLV 288
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
I+ G E ++++ L++MYSKC +VF + E +++ + +I H +AF
Sbjct: 289 IKRGLETDRVLNNCLIEMYSKCLSAEDAYEVFARIDEPDVVHCSLMISCFDRHDMAPEAF 348
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+ F + + G+ P++ TF L G VN R I + +
Sbjct: 349 DIFMQMSDMGVKPNQYTFVGLAIVASRTGDVNLCRSIHAHIVK 391
>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 694
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 293/542 (54%), Gaps = 9/542 (1%)
Query: 13 SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLW 72
S +H++ + +++HA + L F TKL+ + + AR +FD P+ VF W
Sbjct: 30 SSTHKA--QLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQVFPW 87
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N+IIR Y+ + F DA ++ + ++ PD+FT+ + +AC S L RFVH
Sbjct: 88 NAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFR 147
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD--LVLCNSMISGFAHCGFWDKSL 190
G D + L+ Y+K + A VF+G+ P+ +V +++S +A G ++L
Sbjct: 148 LGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEAL 207
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
++F M ++ PD LV +++ L G+ IH +K ++ + L +MY
Sbjct: 208 EIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLNTMY 267
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + +A +F+ + P+L+ W+A+I+GY++ G A+ F ++ + + D + I
Sbjct: 268 AKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISIT 327
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S ++A A+ ++ + YV + + V +SSAL+DM++KCG + VF+ +R
Sbjct: 328 SAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRTLDR 387
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++ ++++I+G GLHG +A +R + G++P++ TF LL AC H G+V +G F
Sbjct: 388 DVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPNDVTFLGLLIACNHSGMVREGWWFF 447
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIY 488
RM ++ I + +HY ++ LLG AG+L++AY I + PV P V+ GALLS C +
Sbjct: 448 NRMA-DHKINPQQQHYACIIDLLGRAGHLDQAYEVIKCM--PVQPGVTVWGALLSACKKH 504
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ +L + A QLF DP + V LSN YA WD V ++R + + GL K+ G SW
Sbjct: 505 RHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSW 564
Query: 549 VS 550
V
Sbjct: 565 VE 566
>gi|356523586|ref|XP_003530418.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 288/540 (53%), Gaps = 18/540 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L ++HA V KA+L +D F A KL+ ++L L SA +F+ P +V L+NSIIR
Sbjct: 33 NLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIR 92
Query: 78 AYALAHRFNDAKSLFKNLLRTQ---LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
A+A H + F + Q L PDNFTY + +AC+ S LP +R +H G
Sbjct: 93 AHA--HNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKACTGPSSLPLVRMIHAHVEKFG 150
Query: 135 LGRDSITSSALVTAYSKL--SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
D ++L+ +YS+ + +D A+ +F + + D+V NSMI G CG + + +L
Sbjct: 151 FYGDIFVPNSLIDSYSRCGSAGLDGAMSLFLAMKERDVVTWNSMIGGLVRCGELEGACKL 210
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYA 251
FD M D + ++ G + G+ F L + VS S +V Y+
Sbjct: 211 FDEM----PERDMVSWNTMLDGYAK-----AGEMDRAFELFERMPQRNIVSWSTMVCGYS 261
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+ M+ A +F+ ++V W+ +I GY+++G +A + K+ G + D + S
Sbjct: 262 KGGDMDMARVLFDRCPAKNVVLWTTIIAGYAEKGFVREATELYGKMEEAGLRPDDGFLIS 321
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE-TMSER 370
+LAA A+S + G IH + + F V +A +DMY+KCG L VF M+++
Sbjct: 322 ILAACAESGMLGLGKRIHASMRRWRFRCGTKVLNAFIDMYAKCGCLDAAFDVFSGMMAKK 381
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++++NS+I G +HG +A E F ++ +G PD TF LLCAC H GLVN+GR+ F
Sbjct: 382 DVVSWNSMIQGFAMHGHGEKALELFSRMVPEGFEPDTYTFVGLLCACTHAGLVNEGRKYF 441
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M + YGI + EHY M+ LLG G+L+EA++ + S+P + + G LL+ C ++ +
Sbjct: 442 YSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFTLLRSMPMEPNAIILGTLLNACRMHND 501
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
D A V QLF+ +P +LSN YA+ G W +V +R +++ G +K +G S +
Sbjct: 502 VDFARAVCEQLFKVEPTDPGNYSLLSNIYAQAGDWMNVANVRLQMMNTGGQKPSGASSIE 561
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
L+ L K +N+ IH V++ + V+ L+ +S C +L + VF +
Sbjct: 20 LLEEKLCDLHKCSNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHV 79
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEF--FRDIIEKGLNPDESTFSALLCAC 417
N+ YNS+I H ++ + F F + + GL PD T+ LL AC
Sbjct: 80 PHPNVHLYNSIIRAHA-HNTSHPSLPFNAFFQMQKNGLFPDNFTYPFLLKAC 130
>gi|147856499|emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
Length = 954
Score = 291 bits (746), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 189/628 (30%), Positives = 320/628 (50%), Gaps = 87/628 (13%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
FFN L+ + SKSH S +++H+ + R F A ++V +YA ++ A+ +F
Sbjct: 36 FFN--DLLQQCSKSHLS----QQIHSQIIVTGSHRSAFLAARVVSVYAGFGLVSDAQRVF 89
Query: 62 DKTPQR---SVFLWNSIIRAYALAHRF-NDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+ +P ++ LWNSI+RA +AH + +A ++ + + + D FT+ + RAC+
Sbjct: 90 EVSPIECFSNLLLWNSILRAN-VAHGYCEEALEIYCRMRKLGVSADGFTFPLVIRACALM 148
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS----------- 166
R VHG + G + + L+ Y K+ +D+A KVF+ ++
Sbjct: 149 GSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDDARKVFERMAVRSCVSWNTMV 208
Query: 167 ------------------------DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+P+LV S++S A CG ++++LF M G
Sbjct: 209 SGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSLLSSHARCGQHVETMELFGRMRMRGIG 268
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
L ++S + + G+ IHG+ +K F++Y +V + L+ +Y + +N+A +
Sbjct: 269 ATAEALAVVLSVSVDLAAFDEGKVIHGYVVKGGFENYLFVKNSLICLYGKHGNVNAARIL 328
Query: 263 F-----------NSLF----------------------------HPDLVTWSALITGYSQ 283
F N+L P++V+WSA+I G++
Sbjct: 329 FLEIKTKNIVSWNALISSYADLGWCDEAFAIFLQLEKTDEYPMVRPNVVSWSAVIGGFAS 388
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+G +AL FR++ + KA+ V IASVL+ A+ A + G IHG+V++ + +++V
Sbjct: 389 KGQGEEALELFRRMQLAKVKANSVTIASVLSVCAELAALHLGREIHGHVVRSLMDGNILV 448
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
+ L++MY+K G G VFE + +++I++N+++ G G+HG A F +I+ G
Sbjct: 449 GNGLINMYTKSGSFKEGNLVFEKIENKDLISWNTMVAGYGIHGLGENAIRTFDQMIKDGF 508
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
PD TF A+L AC H GLV +GRE+F +M +E+ ++ + EHY MV LLG AG L+EA
Sbjct: 509 EPDGVTFVAVLSACSHAGLVAEGRELFDKMIKEFRVEPQMEHYACMVDLLGRAGLLQEAS 568
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE-NDPRKGAYKVMLSNTYAED 522
+ S+P + V GALL+ C ++ N+++AE A Q+F N G+Y ++LSN YA
Sbjct: 569 KVVKSMPVEPNACVWGALLNSCRMHKNTEVAEETASQIFNLNSEIAGSY-MLLSNIYAAS 627
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
GRW+D K+R GL+K G SW+
Sbjct: 628 GRWEDSAKVRISAKTKGLKKTPGQSWIQ 655
>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1004
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 280/544 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + ++L + + +H+L+ K + F LV +Y+ + A +F +
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +W+++I + ++ LF + P+ +T + A + +L + +H
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G D S+ALVT Y K + + K+++ + D DL+ N+ +SG CG +D+
Sbjct: 440 CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDR 499
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L +F ML G P+ YT + ++ + G+ +H +K+ D ++V + L+
Sbjct: 500 PLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALID 559
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A FN L DL TW+ +IT Y+Q KAL YFR++ +G K +
Sbjct: 560 MYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+A L+ + A++ G +H V + G + V SALVDMY+KCG + +FE +
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALI 679
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+ I +N++I G +G +A FR ++++G++PD TF+ +L AC H GLV +G+E
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M ++GI +H MV +LG G +E FI + + + +L ++
Sbjct: 740 HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMH 799
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N L E A++LFE P + + ++LSN +A +GRWDDV ++R + G++KE G SW
Sbjct: 800 NNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSW 859
Query: 549 VSGS 552
V +
Sbjct: 860 VEAN 863
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 215/421 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +SL K +H L+ K + D LV +YA AR++ K P R
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I+ ND+ LF+ + + P+ FT A +ACS L + +H
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A GL D SALV Y+K I+ A K+F G+ + + V N +++G+A G
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+LF M+ L +E+TL ++ G L GQ IH +K ++ +++ LV
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C A VF ++ PD+V WSALIT QQG +++ F + + +
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I S+L+AA + N+ G IH V ++GFE V VS+ALV MY K G + G +++E+M
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+R++I++N+ + GL G + F ++E+G P+ TF ++L +C V+ GR+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 429 I 429
+
Sbjct: 538 V 538
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 206/415 (49%), Gaps = 2/415 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++HA K LL D F + LV LYA + A +F P+++ WN ++
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
YA LF +++ +K + FT + + C+ + +L + +H I G
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ LV YSK L +AI VF + PD+V+ +++I+ G ++S++LF M
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLM- 406
Query: 198 RLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
RLG T P++YT+ L+S L GQ IH K F++ VS+ LV+MY + C+
Sbjct: 407 RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ ++ S+ DL++W+A ++G G Y + L F + +G + S+L +
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ +V G +H ++I++ + + V +AL+DMY+KC YL F +S R++ T+
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWT 586
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+I +A +FR + ++G+ P+E T + L C + G+++ +
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS 641
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 159/326 (48%), Gaps = 6/326 (1%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y+ + R C+ L + +HG + + DS +LV Y+K A V +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL---LSV 223
D D+V ++I G GF + S+ LF M G P+E+TL +GL SL L +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLA---TGLKACSLCMALDL 231
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +H K +V S LV +YA+C + A +F + + VTW+ L+ GY+Q
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+GD L F + K + + +VL A S N+ G VIH +I+ G+E + +
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
LVDMYSKCG I VF+T+ + +I+ ++++I L G + ++ + F +
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411
Query: 404 NPDESTFSALLCACCHGGLVNDGREI 429
P++ T +LL A + G + G+ I
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSI 437
>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 1047
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 172/528 (32%), Positives = 274/528 (51%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+ H+ KA + D L+ LY + + +A F T +V LWN ++ AY L
Sbjct: 392 KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLL 451
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
N++ +F + ++P+ FTY I R CS + +H + +G + S
Sbjct: 452 DNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS 511
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
S L+ Y+KL +D A+K+F + + D+V +MI+G+A + ++L LF M G
Sbjct: 512 SVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIH 571
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D IS L+ GQ IH S + V + LVS+YARC + AY
Sbjct: 572 SDNIGFASAISACAGIQALNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFA 631
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ +F D ++W++LI+G++Q G +AL F +++ G++ + ++AAA ANV
Sbjct: 632 FDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANV 691
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ G + VS+ L+ +Y+KCG + + F M E+N I++N+++ G
Sbjct: 692 KLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGNIDDAERQFFEMPEKNEISWNAMLTGY 751
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG ++A F D+ + G+ P+ TF +L AC H GLV++G + F M E +G+ K
Sbjct: 752 SQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSACSHVGLVDEGIKYFQSMREVHGLVPK 811
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V LLG +G L A F+ +P D V LLS C ++ N D+ E A L
Sbjct: 812 PEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAMVCRTLLSACIVHKNIDIGEFAASHLL 871
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E +P+ A V+LSN YA G+W + R + D G++KE G SW+
Sbjct: 872 ELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMKDRGVKKEPGRSWIE 919
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 117/412 (28%), Positives = 203/412 (49%), Gaps = 3/412 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH + K + +L+ LY L A +FD+ P R + WN ++ +
Sbjct: 89 KLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGK 148
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP--GLRFVHGGAIVSGLGRDSIT 141
LF+ +L+ ++KPD TYA + R C D+P + +H I G
Sbjct: 149 MAGRVLGLFRRMLQEKVKPDERTYAGVLRGCG-GGDVPFHCVEKIHARTITHGYENSLFV 207
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L+ Y K ++ A KVFDG+ D V +M+SG + G ++++ LF M G
Sbjct: 208 CNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGV 267
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P Y ++S + VG+ +HG LK F YV + LV++Y+R A
Sbjct: 268 YPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQ 327
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VFN++ D V++++LI+G SQQG KAL F+K+ + K D V +AS+L+A +
Sbjct: 328 VFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGA 387
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G H Y I+ G +++ AL+D+Y KC + + F + N++ +N +++
Sbjct: 388 LLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVA 447
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
GL ++F+ F + +G+ P++ T+ ++L C V+ G +I T++
Sbjct: 448 YGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQV 499
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 128/450 (28%), Positives = 219/450 (48%), Gaps = 3/450 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++LH LV K + + LV LY+ L N +P+ ++ F+ QR +NS+I +
Sbjct: 291 EQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQV-FNAMLQRDEVSYNSLISGLSQ 349
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ A LFK + LKPD T A + ACS L + H AI +G+ D I
Sbjct: 350 QGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIIL 409
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
AL+ Y K S I A + F ++VL N M+ + ++S ++F M G
Sbjct: 410 EGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGI 469
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+++T ++ + +G+ IH LK+ F YVSSVL+ MYA+ ++ A
Sbjct: 470 EPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALK 529
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F L D+V+W+A+I GY+Q + +AL F+++ QG +D + AS ++A A
Sbjct: 530 IFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQA 589
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IH G+ + V +ALV +Y++CG + F+ + ++ I++NS+I G
Sbjct: 590 LNQGQQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISG 649
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G +A F + + G + TF + A + V G++I M + G +
Sbjct: 650 FAQSGHCEEALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHA-MIIKTGHDS 708
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+TE ++ L GN+++A + +P+
Sbjct: 709 ETEVSNVLITLYAKCGNIDDAERQFFEMPE 738
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 203/411 (49%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+++HA F L+ LY N L SA+ +FD +R W +++ +
Sbjct: 189 VEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQ 248
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ +A LF + + + P + ++ + AC++ +HG + G ++
Sbjct: 249 SGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYV 308
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ALVT YS+L A +VF+ + D V NS+ISG + G+ DK+L+LF M
Sbjct: 309 CNALVTLYSRLGNFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCL 368
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD T+ L+S L VG+ H + +K+ S + L+ +Y +C+ + +A+
Sbjct: 369 KPDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHE 428
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F S ++V W+ ++ Y + ++ F ++ M+G + + S+L +
Sbjct: 429 FFLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRA 488
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G IH V++ GF+ +V VSS L+DMY+K G L +++F + E++++++ ++I G
Sbjct: 489 VDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAG 548
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
H +A F+++ ++G++ D F++ + AC +N G++I +
Sbjct: 549 YAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQ 599
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 189/417 (45%), Gaps = 49/417 (11%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +++ +++H V K + + ++ L+ +YA L A +F + ++
Sbjct: 479 ILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKD 538
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I YA +F +A +LFK + + DN +A AC+ L + +H
Sbjct: 539 VVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHA 598
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A VSG D +ALV+ Y++ + +A FD + D + NS+ISGFA G ++
Sbjct: 599 QACVSGYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEE 658
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF M + G+ + +T +S + + +G+ IH +K+ DS VS+VL++
Sbjct: 659 ALSLFSQMSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLIT 718
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+YA+C ++ A F + + ++W+A++TGYSQ G KAL F + G + V
Sbjct: 719 LYAKCGNIDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVT 778
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL---GIQVFE 365
VL+A C ++GL GI+ F+
Sbjct: 779 FVGVLSA--------------------------------------CSHVGLVDEGIKYFQ 800
Query: 366 TMSERNIIT-----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+M E + + Y V+ LG G +A F + E + PD LL AC
Sbjct: 801 SMREVHGLVPKPEHYACVVDLLGRSGLLSRARRF---VEEMPIQPDAMVCRTLLSAC 854
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 3/224 (1%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M G + T + L+ G S G +HG LK F + + L+ +Y
Sbjct: 59 MEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVVLCERLMDLYIAFGD 118
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ A VF+ + L W+ ++ + G+ L FR++ + K D A VL
Sbjct: 119 LDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRG 178
Query: 316 AAKSANVWPGAV--IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+V V IH I HG+E S+ V + L+D+Y K G+L +VF+ + +R+ +
Sbjct: 179 CG-GGDVPFHCVEKIHARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGLQKRDSV 237
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++ +++ GL G +A F + G+ P FS++L AC
Sbjct: 238 SWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFSSVLSAC 281
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 64/146 (43%)
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+AL YS + + + +G +A+ +L S G +HG +++
Sbjct: 37 TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF V++ L+D+Y G L + VF+ M R + +N V+ +
Sbjct: 97 MGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVLGL 156
Query: 395 FRDIIEKGLNPDESTFSALLCACCHG 420
FR ++++ + PDE T++ +L C G
Sbjct: 157 FRRMLQEKVKPDERTYAGVLRGCGGG 182
>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 989
Score = 291 bits (746), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 169/529 (31%), Positives = 268/529 (50%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ K+LH+ V K + D L+ LY + +A F T +V LWN ++ AY
Sbjct: 332 KGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYG 391
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+++ +F + L P+ +TY I R C+ L +H I SG +
Sbjct: 392 QLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVY 451
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
S L+ Y+K +D A + + + D+V +MI+G+ + ++L+LF M G
Sbjct: 452 VCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQG 511
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D IS L+ GQ IH S + + + LVS+YARC AY
Sbjct: 512 IRSDNIGFSSAISACAGIQALNQGQQIHAQSYISGYSEDLSIGNALVSLYARCGRAQDAY 571
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
F + D ++W+ALI+G++Q G +AL F ++N G +A+ S ++A A +A
Sbjct: 572 LAFEKIDAKDNISWNALISGFAQSGHCEEALQVFSQMNQAGVEANLFTFGSAVSATANTA 631
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
N+ G IH +I+ G++ S+ L+ +YSKCG + + F M E+N++++N++I
Sbjct: 632 NIKQGKQIHAMMIKTGYDSETEASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNAMIT 691
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G HG+ +A F ++ + GL P+ TF +L AC H GLVN+G F M++E+G+
Sbjct: 692 GYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGVLSACSHVGLVNEGLSYFRSMSKEHGLV 751
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
K EHY+ +V LLG A L A FI +P D + LLS C ++ N ++ E A
Sbjct: 752 PKPEHYVCVVDLLGRAALLCCAREFIEEMPIEPDAMIWRTLLSACTVHKNIEIGEFAARH 811
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L E +P A V+LSN YA G+WD + R + D G++KE G SW+
Sbjct: 812 LLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWI 860
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 211/419 (50%), Gaps = 1/419 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL K+LHA + K+ + ++L+ +Y + + +A LFD P +V WN +I
Sbjct: 25 SLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDIPSSNVSFWNKVIS 84
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLG 136
+ LF ++ + PD T+A + RACS + +H I G G
Sbjct: 85 GLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVTEQIHAKIIHHGFG 144
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ + L+ YSK +D A VF+ + D V +MISG + G D+++ LF M
Sbjct: 145 SSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQNGREDEAILLFCQM 204
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ P Y ++S + L +G+ +HGF +K S +V + LV++Y+R +
Sbjct: 205 HKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFVCNALVTLYSRWGNL 264
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+A +F+ + D +++++LI+G +Q+G +AL F K+ + K D V +AS+L+A
Sbjct: 265 IAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCMKPDCVTVASLLSAC 324
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H YVI+ G +++ +L+D+Y KC + + F T N++ +N
Sbjct: 325 ASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHEYFLTTETENVVLWN 384
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+++ G G +++ F + +GL P++ T+ ++L C G ++ G +I T++ +
Sbjct: 385 VMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGALDLGEQIHTQVIK 443
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 202/411 (49%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
T+++HA + P L+ LY+ N + A+++F++ + W ++I +
Sbjct: 131 TEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLSQ 190
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
R ++A LF + ++ + P + ++ + AC++ +HG + GL ++
Sbjct: 191 NGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETFV 250
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ALVT YS+ + A ++F + D + NS+ISG A GF D++LQLF+ M
Sbjct: 251 CNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDCM 310
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD T+ L+S G+ +H + +K S + L+ +Y +C + +A+
Sbjct: 311 KPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAHE 370
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F + ++V W+ ++ Y Q G+ ++ + F ++ ++G + S+L
Sbjct: 371 YFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLGA 430
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IH VI+ GF+ +V V S L+DMY+K G L + + + E +++++ ++I G
Sbjct: 431 LDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSWTAMIAG 490
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
H +A + F+++ +G+ D FS+ + AC +N G++I +
Sbjct: 491 YTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQ 541
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 130/482 (26%), Positives = 212/482 (43%), Gaps = 44/482 (9%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
TY + C + L + +H SG + + S L+ Y +D AIK+FD +
Sbjct: 12 TYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGEVDNAIKLFDDI 71
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLS 222
++ N +ISG + L LF M+ TPDE T ++ SG P
Sbjct: 72 PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAP--FQ 129
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
V + IH + F S V + L+ +Y++ ++ A VF LF D V+W A+I+G S
Sbjct: 130 VTEQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLKDSVSWVAMISGLS 189
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q G +A+ F +++ P + +SVL+A K G +HG++++ G
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V +ALV +YS+ G L Q+F M R+ I+YNS+I GL GF+ +A + F +
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLDC 309
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFT---------------------------RMTE 435
+ PD T ++LL AC G G+++ +
Sbjct: 310 MKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCFDIETAH 369
Query: 436 EYGIQAKTEHYI---YMVKLLGLAGNLEEAY-SFIWSLPKPVDPA--VSGALLSCCHIYG 489
EY + +TE+ + M+ G GNL E+Y F+ + + P ++L C G
Sbjct: 370 EYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCTSLG 429
Query: 490 NSDLAEIVAHQLFENDPRKGAYKV-MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
DL E + Q+ ++ + Y +L + YA+ G D + LR+E VSW
Sbjct: 430 ALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQR-----LREEDVVSW 484
Query: 549 VS 550
+
Sbjct: 485 TA 486
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 192/409 (46%), Gaps = 6/409 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L +++H V K+ + + + L+ +YA + L +AR + + +
Sbjct: 421 ILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREED 480
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I Y F +A LF+ + ++ DN ++ AC+ L + +H
Sbjct: 481 VVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHA 540
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +SG D +ALV+ Y++ +A F+ + D + N++ISGFA G ++
Sbjct: 541 QSYISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEE 600
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+LQ+F M + G + +T +S + + G+ IH +K+ +DS S+VL++
Sbjct: 601 ALQVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLIT 660
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+Y++C + A F + ++V+W+A+ITGYSQ G +A+ F ++ G + V
Sbjct: 661 LYSKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVT 720
Query: 309 IASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
VL+A + V G + +HG +VD+ + L + E M
Sbjct: 721 FVGVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEM 780
Query: 368 S-ERNIITYNSVILGLGLHGFTYQAFEF-FRDIIEKGLNPDESTFSALL 414
E + + + +++ +H + EF R ++E L P++S LL
Sbjct: 781 PIEPDAMIWRTLLSACTVHK-NIEIGEFAARHLLE--LEPEDSATYVLL 826
>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 989
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 280/544 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + ++L + + +H+L+ K + F LV +Y+ + A +F +
Sbjct: 320 VLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPD 379
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +W+++I + ++ LF + P+ +T + A + +L + +H
Sbjct: 380 IVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHA 439
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G D S+ALVT Y K + + K+++ + D DL+ N+ +SG CG +D+
Sbjct: 440 CVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDR 499
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L +F ML G P+ YT + ++ + G+ +H +K+ D ++V + L+
Sbjct: 500 PLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALID 559
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A FN L DL TW+ +IT Y+Q KAL YFR++ +G K +
Sbjct: 560 MYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFT 619
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+A L+ + A++ G +H V + G + V SALVDMY+KCG + +FE +
Sbjct: 620 LAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEALI 679
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+ I +N++I G +G +A FR ++++G++PD TF+ +L AC H GLV +G+E
Sbjct: 680 RRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTGILSACSHQGLVEEGKE 739
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M ++GI +H MV +LG G +E FI + + + +L ++
Sbjct: 740 HFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLSQNALIWETVLGASKMH 799
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N L E A++LFE P + + ++LSN +A +GRWDDV ++R + G++KE G SW
Sbjct: 800 NNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVRSLMSSKGVKKEPGCSW 859
Query: 549 VSGS 552
V +
Sbjct: 860 VEAN 863
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 133/421 (31%), Positives = 215/421 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +SL K +H L+ K + D LV +YA AR++ K P R
Sbjct: 118 MLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMPDRD 177
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I+ ND+ LF+ + + P+ FT A +ACS L + +H
Sbjct: 178 VVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHA 237
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A GL D SALV Y+K I+ A K+F G+ + + V N +++G+A G
Sbjct: 238 QAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQRGDVTG 297
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+LF M+ L +E+TL ++ G L GQ IH +K ++ +++ LV
Sbjct: 298 VLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFIGCGLVD 357
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C A VF ++ PD+V WSALIT QQG +++ F + + +
Sbjct: 358 MYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYT 417
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I S+L+AA + N+ G IH V ++GFE V VS+ALV MY K G + G +++E+M
Sbjct: 418 ICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCVHDGTKLYESMV 477
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+R++I++N+ + GL G + F ++E+G P+ TF ++L +C V+ GR+
Sbjct: 478 DRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQ 537
Query: 429 I 429
+
Sbjct: 538 V 538
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 223/455 (49%), Gaps = 3/455 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++HA K LL D F + LV LYA + A +F P+++ WN ++
Sbjct: 228 ALDLGKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLN 287
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
YA LF +++ +K + FT + + C+ + +L + +H I G
Sbjct: 288 GYAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEG 347
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ LV YSK L +AI VF + PD+V+ +++I+ G ++S++LF ++
Sbjct: 348 NEFIGCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFH-LM 406
Query: 198 RLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
RLG T P++YT+ L+S L GQ IH K F++ VS+ LV+MY + C+
Sbjct: 407 RLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNGCV 466
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ ++ S+ DL++W+A ++G G Y + L F + +G + S+L +
Sbjct: 467 HDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILGSC 526
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ +V G +H ++I++ + + V +AL+DMY+KC YL F +S R++ T+
Sbjct: 527 SCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWT 586
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+I +A +FR + ++G+ P+E T + L C + G+++ + M +
Sbjct: 587 VIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHS-MVFK 645
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
G + +V + G +EEA + +L +
Sbjct: 646 SGHVSDMFVGSALVDMYAKCGCMEEAEALFEALIR 680
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 159/326 (48%), Gaps = 6/326 (1%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y+ + R C+ L + +HG + + DS +LV Y+K A V +
Sbjct: 115 YSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLAKMP 174
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL---LSV 223
D D+V ++I G GF + S+ LF M G P+E+TL +GL SL L +
Sbjct: 175 DRDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLA---TGLKACSLCMALDL 231
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +H K +V S LV +YA+C + A +F + + VTW+ L+ GY+Q
Sbjct: 232 GKQMHAQAFKLGLLLDLFVGSALVDLYAKCGEIELASKMFIGMPEQNDVTWNVLLNGYAQ 291
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+GD L F + K + + +VL A S N+ G VIH +I+ G+E + +
Sbjct: 292 RGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGNEFI 351
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
LVDMYSKCG I VF+T+ + +I+ ++++I L G + ++ + F +
Sbjct: 352 GCGLVDMYSKCGLAIDAIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDT 411
Query: 404 NPDESTFSALLCACCHGGLVNDGREI 429
P++ T +LL A + G + G+ I
Sbjct: 412 LPNQYTICSLLSAATNTGNLQYGQSI 437
>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g23330
gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 715
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 181/570 (31%), Positives = 297/570 (52%), Gaps = 39/570 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S S+ K+LHA + L A+ ++ +Y +L A +LF V W S+I
Sbjct: 19 KSKSQAKQLHAQFIRTQSLSHT-SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVI 77
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R + F+ A + F + + PD+ + + ++C+ DL VHG + G+
Sbjct: 78 RCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMD 137
Query: 137 RDSITSSALVTAY-------SKLSL-----------------------------IDEAIK 160
D T +AL+ Y SK+S+ ID +
Sbjct: 138 CDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRR 197
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VF+ + D+V N++I+G+A G ++ +L++ M PD +TL ++ E
Sbjct: 198 VFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ G+ IHG+ ++ DS Y+ S LV MYA+ + + VF+ L+ D ++W++L+ G
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y Q G Y +AL FR++ K V +SV+ A A A + G +HGYV++ GF +
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ ++SALVDMYSKCG + ++F+ M+ + +++ ++I+G LHG ++A F ++
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+G+ P++ F A+L AC H GLV++ F MT+ YG+ + EHY + LLG AG LE
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK-GAYKVMLSNTY 519
EAY+FI + +V LLS C ++ N +LAE VA ++F D GAY V++ N Y
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAY-VLMCNMY 556
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +GRW ++ KLR + GLRK+ SW+
Sbjct: 557 ASNGRWKEMAKLRLRMRKKGLRKKPACSWI 586
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 129/280 (46%), Gaps = 10/280 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + + + KE+H V + + D + + LV +YA + + + +F + R
Sbjct: 248 VLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRD 307
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNS++ Y R+N+A LF+ ++ ++KP ++ + AC+ + L + +HG
Sbjct: 308 GISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHG 367
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G G + +SALV YSK I A K+FD ++ D V ++I G A G +
Sbjct: 368 YVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHE 427
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-----FCLKSSFDSYDYVS 243
++ LF+ M R G P++ V +++ L+ G + L + Y V+
Sbjct: 428 AVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVA 487
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYS 282
+L R + AY+ + + P WS L++ S
Sbjct: 488 DLL----GRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCS 523
>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 837
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 173/547 (31%), Positives = 285/547 (52%), Gaps = 4/547 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD--KTPQ 66
VL + S + + +H V K + F T LV +YA + A LF + +
Sbjct: 168 VLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR 227
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
++ LW +++ YA A F+ + ++ + +T+ I ACS V
Sbjct: 228 KNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQV 287
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG + SG G + SALV Y+K + A + + + D D+V NS++ GF G
Sbjct: 288 HGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLE 347
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+++L+LF M D+YT +++ S+ + +HG +K+ F++Y VS+ L
Sbjct: 348 EEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINP--KSVHGLIIKTGFENYKLVSNAL 405
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MYA+ M+ AY VF + D+++W++L+TGY+Q + ++L F + + G D
Sbjct: 406 VDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQ 465
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
++AS+L+A A+ + G +H I+ G S V ++LV MY+KCG L +F +
Sbjct: 466 FIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVS 525
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M +++IT+ ++I+G +G + +F+ ++ G PD TF LL AC H GLV++G
Sbjct: 526 MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEG 585
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
R+ F +M + YGI+ EHY M+ L G +G L+EA + + D V +LLS C
Sbjct: 586 RKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACR 645
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++ N +LAE A LFE +P VMLSN Y+ +W+DV K+R + G+ KE G
Sbjct: 646 VHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGC 705
Query: 547 SWVSGSS 553
SW+ +S
Sbjct: 706 SWLEINS 712
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/495 (26%), Positives = 227/495 (45%), Gaps = 72/495 (14%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+ +LSKS Q + AR LFDK PQ+
Sbjct: 71 LLNQLSKSGQ------------------------------------VNDARKLFDKMPQK 94
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFK---------------------------NLLRTQL 100
+ WN++I +Y R +A+ LF +L R+
Sbjct: 95 DEYSWNTMISSYVNVGRLVEARELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMR 154
Query: 101 ----KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
K FT + R CS + +HG + +G + + LV Y+K +
Sbjct: 155 LEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVS 214
Query: 157 EAIKVFDGVS--DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
EA +F G+ + VL +M++G+A G K+++ F +M G ++YT +++
Sbjct: 215 EAEFLFKGLEFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTA 274
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
G+ +HGF +KS F S YV S LV MYA+C + +A ++ ++ D+V+W
Sbjct: 275 CSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLETMEDDDVVSW 334
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
++L+ G+ + G +AL F+ ++ + K D SVL ++ P +V HG +I+
Sbjct: 335 NSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSINPKSV-HGLIIK 392
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GFE +VS+ALVDMY+K G + VFE M E+++I++ S++ G + ++ +
Sbjct: 393 TGFENYKLVSNALVDMYAKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKI 452
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F D+ G+NPD+ +++L AC L+ G+++ + G++ Y +V +
Sbjct: 453 FCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKS-GLRWSQSVYNSLVAMYA 511
Query: 455 LAGNLEEAYSFIWSL 469
G L++A + S+
Sbjct: 512 KCGCLDDADAIFVSM 526
>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 291 bits (745), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 280/536 (52%), Gaps = 25/536 (4%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
F L+ +YA + ++ LF+ R + WN++I +++ + RF++A + F+ ++
Sbjct: 232 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 291
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSITSSALVTAYSKLSLIDE 157
++ D T A + ACS L + +H + + L +S SALV Y ++
Sbjct: 292 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 351
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GKTPDEYTLVGLISGLW 216
+VFD + + L N+MISG+A G +K+L LF M+++ G P+ T+ ++
Sbjct: 352 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 411
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
S + IHG+ +K F YV + L+ MY+R M+ + +F+S+ D V+W+
Sbjct: 412 HCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNT 471
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGK-----------------KADPVLIASVLAAAAKS 319
+ITGY G Y AL ++ K + + + +VL A
Sbjct: 472 MITGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAAL 531
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
A + G IH Y I++ + V SALVDMY+KCG L L +VF M +N+IT+N +I
Sbjct: 532 AAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLI 591
Query: 380 LGLGLHGFTYQAFEFFRDIIEKG-----LNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ G+HG +A E F++++ + P+E TF + AC H GL+++G +F RM
Sbjct: 592 MACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMK 651
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYGNSDL 493
++G++ ++HY +V LLG AG LEEAY + ++P D + +LL C I+ N +L
Sbjct: 652 HDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVEL 711
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E+ A L +P ++ V+LSN Y+ G W+ M++R ++ G++KE G SW+
Sbjct: 712 GEVAAKNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWI 767
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/377 (30%), Positives = 196/377 (51%), Gaps = 13/377 (3%)
Query: 55 PSARILFDKTP------QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYA 108
P+A L KTP RS W +R+ ++ F +A S + + + +PDNF +
Sbjct: 37 PTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFP 96
Query: 109 CITRACSENSDLPGLRFVHGGAIVSGLGRDSIT-SSALVTAYSKLSLIDEAIKVFDGVSD 167
+ +A S DL +H A+ G G S+T ++ LV Y K I + KVFD ++D
Sbjct: 97 AVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITD 156
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL---ISGLWEPSLLSVG 224
D V NS I+ W+++L+ F M +TLV + S L L +G
Sbjct: 157 RDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLG 216
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +HG+ L+ D + ++ L++MYA+ ++ + +F S D+V+W+ +I+ +SQ
Sbjct: 217 KQLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQS 275
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-SVMV 343
+ +AL +FR + ++G + D V IASVL A + + G IH YV+++ + + V
Sbjct: 276 DRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFV 335
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KG 402
SALVDMY C + G +VF+ + R I +N++I G +G +A F ++I+ G
Sbjct: 336 GSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAG 395
Query: 403 LNPDESTFSALLCACCH 419
L P+ +T ++++ AC H
Sbjct: 396 LLPNTTTMASVMPACVH 412
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 188/396 (47%), Gaps = 7/396 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ Q L +++HA K A LV +Y + +FD+ R
Sbjct: 98 VLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDR 157
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-- 125
WNS I A ++ A F+ + ++ +FT + ACS + GLR
Sbjct: 158 DQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFTLVSVALACSNLGVMHGLRLGK 217
Query: 126 -VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG ++ G + + T++AL+ Y+KL +D++ +F+ D D+V N+MIS F+
Sbjct: 218 QLHGYSLRVG-DQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSD 276
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS-FDSYDYVS 243
+ ++L F M+ G D T+ ++ L VG+ IH + L+++ +V
Sbjct: 277 RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVG 336
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF-RKLNMQGK 302
S LV MY C + S VF+ + + W+A+I+GY++ G KAL F + + G
Sbjct: 337 SALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGL 396
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ +ASV+ A IHGY ++ GF+ V +AL+DMYS+ G + +
Sbjct: 397 LPNTTTMASVMPACVHCEAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISET 456
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+F++M R+ +++N++I G L G A ++
Sbjct: 457 IFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEM 492
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 119/277 (42%), Gaps = 31/277 (11%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++ S + +H K D + L+ +Y+ + + +FD R WN++I
Sbjct: 414 EAFSNKESIHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMI 473
Query: 77 RAYALAHRFNDAKSLFKNLLRTQ-----------------LKPDNFTYACITRACSENSD 119
Y L+ R+++A L + R + KP+ T + C+ +
Sbjct: 474 TGYVLSGRYSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAA 533
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ + +H AI + L D SALV Y+K ++ + +VF+ + + +++ N +I
Sbjct: 534 IAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMA 593
Query: 180 FAHCGFWDKSLQLFDWML----RLGKT-PDEYTLVGLISGLWEPSLLSVGQGI-----HG 229
G +++L+LF M+ R G+ P+E T + + + L+S G + H
Sbjct: 594 CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHD 653
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
++ + D Y + +V + R + AY + N++
Sbjct: 654 HGVEPTSDHY----ACVVDLLGRAGQLEEAYELVNTM 686
>gi|225445472|ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial [Vitis vinifera]
Length = 773
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 291/544 (53%), Gaps = 9/544 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL H+ +LH+ + K L + F L+ +Y+ L AR +FD+ +
Sbjct: 182 VLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKD 241
Query: 69 VFLWNSIIRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN+++ YA +A +F +L+ +K D+ ++ AC + R +H
Sbjct: 242 LVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIH 301
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
A+ G + L++ YSK I++A VF+ + D ++V +MIS +
Sbjct: 302 SLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISE-----E 356
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ LF+ M R G P++ T VGLI + +L+ GQ IHG C+K+SF S VS+ L+
Sbjct: 357 DATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLI 416
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+ M+ + VF L + ++++W++LI+GY+Q G + +AL F M+ + +
Sbjct: 417 TMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALMESR-PNEF 475
Query: 308 LIASVLA--AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
SVL+ A+A++ ++ G H ++++ G + +VSSAL+DMY+K G + + VF
Sbjct: 476 TFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFS 535
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+N + + ++I HG F+D+ +G+ PD TF A++ AC G+V+
Sbjct: 536 ETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITACGRKGMVDT 595
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G ++F M +++ I+ EHY MV +LG AG L+EA F+ +P +V +LL C
Sbjct: 596 GYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSVLQSLLGAC 655
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+GN D+A+ VA L E +P V++SN YAE G W+ V K+R + + G+RKE G
Sbjct: 656 RIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRERGVRKEIG 715
Query: 546 VSWV 549
SWV
Sbjct: 716 FSWV 719
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 201/413 (48%), Gaps = 31/413 (7%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH +V + S+ F+++K V P D++PQ ++ S+ R+ A
Sbjct: 9 KILHRVVQQRSIQFKYFHSSKHVHQ-------P-----LDQSPQTTI---ASLNRSMLTA 53
Query: 83 HRFN---DAKSLFKNLLRTQL--KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
R N +A LFK L+ D T A + +AC +S L G + +H AI SG
Sbjct: 54 LRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKL-GCQ-IHAFAISSGFIS 111
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++L+ Y K L D A+ VF+ +++PD+V N+++SGF D +L M
Sbjct: 112 HVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMN 168
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G D T +++ + G +H LK D +V + L++MY+RC +
Sbjct: 169 FTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLV 228
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+ + + DLV+W+A+++GY+Q+G+ G +A+ F ++ +G K D V ++A
Sbjct: 229 EARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISAC 288
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
G IH ++ G++ V V + L+ YSKC + VFE++ +RN++++
Sbjct: 289 GHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWT 348
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++I A F ++ G+ P++ TF L+ A LV +G+ I
Sbjct: 349 TMI-----SISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMI 396
>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Glycine max]
Length = 676
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 171/548 (31%), Positives = 291/548 (53%), Gaps = 3/548 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
N + ++ S +SL+ + +H V K+ F KL+ Y L AR LFD
Sbjct: 1 MNFYSSLIAQSAHTKSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFD 59
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P R + WNS+I ++ + +A + N+L + PD +T++ I++A S+ +
Sbjct: 60 ELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRH 119
Query: 123 LRFVHGGAIVSGLG-RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ HG A+V GL D +SALV Y+K + +A VF V + D+VL ++I G+A
Sbjct: 120 GQRAHGLAVVLGLEVLDGFVASALVDMYAKFDKMRDAHLVFRRVLEKDVVLFTALIVGYA 179
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G ++L++F+ M+ G P+EYTL ++ L GQ IHG +KS +S
Sbjct: 180 QHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESVVA 239
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ L++MY+RCN + + VFN L + + VTW++ + G Q G A+ FR++
Sbjct: 240 SQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCS 299
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+P ++S+L A + A + G IH ++ G + + +AL+++Y KCG +
Sbjct: 300 ISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNMDKAR 359
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
VF+ ++E +++ NS+I +GF ++A E F + GL P+ TF ++L AC + G
Sbjct: 360 SVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAG 419
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV +G +IF + + I+ +H+ M+ LLG + LEEA I + P D + L
Sbjct: 420 LVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNP-DVVLWRTL 478
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L+ C I+G ++AE V ++ E P G ++L+N YA G+W+ V++++ I D L+
Sbjct: 479 LNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRDLKLK 538
Query: 542 KEAGVSWV 549
K +SWV
Sbjct: 539 KSPAMSWV 546
>gi|449438472|ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
gi|449493172|ref|XP_004159212.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g03540-like [Cucumis sativus]
Length = 605
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 182/535 (34%), Positives = 281/535 (52%), Gaps = 7/535 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQRSVFLWNSII 76
S +R ++ HA V K+ L D F L+ LY L + R +FD + V W S+I
Sbjct: 75 SFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMI 134
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y + A LF ++L + ++P+ FT + + +ACSE +L + HG + G
Sbjct: 135 TGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVLGKCFHGVVVRRGFD 194
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ + S+L+ Y + S+ +A ++FD + +PD V ++IS F ++++L F
Sbjct: 195 SNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTRNDLYEEALGFFYLK 254
Query: 197 LRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
R + PD YT +++ L G+ IH + F S LV MY +C
Sbjct: 255 HRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVVTESSLVDMYGKCGA 314
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ + +F+ + + + V+WSAL+ Y GDY KA+ FR++ K+ D +V+ A
Sbjct: 315 VEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREM----KEVDLYSFGTVIRA 370
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A A V PG IH I+ G V+V SALVD+Y+KCG + +VF+ M RN+IT+
Sbjct: 371 CAGLAAVTPGKEIHCQYIRKGGWRDVIVESALVDLYAKCGCINFAYRVFDRMPTRNLITW 430
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
NS+I G +G + A + F +I++G+ PD +F LL AC H GLV+ R F MT
Sbjct: 431 NSMIHGFAQNGSSGIAIQIFEAMIKEGIKPDCISFIGLLFACSHTGLVDQARHYFDLMTG 490
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL-SCCHIYGNSDLA 494
+YGI+ EHY MV LLG AG LEEA + I + D ++ LL +C NS A
Sbjct: 491 KYGIKPGVEHYNCMVDLLGRAGLLEEAENLIENAECRNDSSLWLVLLGACTTTCTNSATA 550
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E +A +L E +P+ V L+N Y GRWDD +K+R+ + + L+K G SW+
Sbjct: 551 ERIAKKLMELEPQCYLSYVHLANVYRAVGRWDDAVKVRELMKNRQLKKMPGQSWM 605
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD-PVLIASVLAAAAKSANVWPGA 326
HP + + I + + G AL+ +++ + + P+L AS+L K + G
Sbjct: 23 HPSIKL--SQILQFCKSGLLNDALHLLNSIDLYDSRINKPLLYASLLQTCIKVDSFTRGR 80
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLG-LGIQVFETMSERNIITYNSVILGLGLH 385
H +V++ G E V ++L+ +Y K G L +VF+ + ++++++ S+I G
Sbjct: 81 QFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFDGLFVKDVVSWASMITGYVRE 140
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
G + A E F D+++ G+ P+ T SA++ AC G
Sbjct: 141 GKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIG 176
>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Vitis vinifera]
Length = 805
Score = 291 bits (744), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 279/527 (52%), Gaps = 2/527 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+ + + + ++ F + ++ + A+ +FD P + V WNSII Y A
Sbjct: 151 EIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAG 210
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
F+ A LF + + +KP T + +AC +L + +HG + GLG D + +
Sbjct: 211 CFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLT 270
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+ V YSK+ I+ A VF + +LV N+MISG G +S LF ++R
Sbjct: 271 SFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGF 330
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D T+V L+ G + + L+ G+ +HG C SF+S +S+ +V +Y++C + A VF
Sbjct: 331 DLTTIVSLLQGCSQTASLATGKILHG-CAIRSFESNLILSTAIVDLYSKCGSLKQATFVF 389
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
N + +++TW+A++ G +Q G AL F ++ +G A+ V S++ + A ++
Sbjct: 390 NRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLK 449
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGL 382
G IHG++ + GF ++ +ALVDMY+KCG + L ++F S ++++ +NS+I G
Sbjct: 450 RGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGY 509
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG YQA + +IE+GL P+++TF +LL AC H LV G +F M ++ I+
Sbjct: 510 GMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSMERDHNIRPI 569
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY +V LL AG EEA + I +P AV ALLS C + N +L + +L
Sbjct: 570 EKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINLGIQTSDKLL 629
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
D +MLSN YAE RWD V +R + + GL+K G S V
Sbjct: 630 ALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLV 676
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/425 (30%), Positives = 222/425 (52%), Gaps = 1/425 (0%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
+H + L +S ++L K HA + SL D F ATKLV+ Y+ L +AR +FD+
Sbjct: 31 IHNFLSLLRESSKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQF 90
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
Q L N+++ Y + R+ + LF + L+ D+ + +AC+ + D
Sbjct: 91 FQPKGLLCNAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGM 150
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+ A+ G+ ++ S++++ K I EA +VFDG+ + D+V NS+I G+ G
Sbjct: 151 EIISSAVEKGMEKNRFVGSSMISFLVKFGKIGEAQRVFDGMPNKDVVCWNSIIGGYVQAG 210
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+D + QLF M G P T+ LI L +G+ +HG+ L + V +
Sbjct: 211 CFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGNDILVLT 270
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
V MY++ + SA VF + +LV+W+A+I+G + G G++ F +L
Sbjct: 271 SFVDMYSKMGDIESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGF 330
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D I S+L +++A++ G ++HG I+ FE ++++S+A+VD+YSKCG L VF
Sbjct: 331 DLTTIVSLLQGCSQTASLATGKILHGCAIR-SFESNLILSTAIVDLYSKCGSLKQATFVF 389
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
M +RN+IT+ ++++GL +G A F + E+G+ + TF +L+ +C H G +
Sbjct: 390 NRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLK 449
Query: 425 DGREI 429
GR I
Sbjct: 450 RGRSI 454
>gi|225430410|ref|XP_002282982.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
[Vitis vinifera]
Length = 599
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 292/545 (53%), Gaps = 4/545 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L ++ ++ + K++HA +SL F TK++ + + L A +F++T +
Sbjct: 9 VLALIETCTNIQQLKQIHAKSIISSLSYTQFIITKIINSFLSHACLDYATQVFNQTQEPD 68
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVH 127
F++N++IRAY+ + A S++ + Q + D +TY + +AC+ + + VH
Sbjct: 69 GFIYNAMIRAYSSSQTPCVAISIYNKMRACQNILGDKYTYPFVFKACASQFAVEKGKEVH 128
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + G D S+L+ Y I A +VFD D+V N++I+G+A G
Sbjct: 129 GVIVRIGYELDGFLQSSLLNFYMVCGEIGNAQQVFDEFDAKDVVFWNALITGYARQGMVL 188
Query: 188 KSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS-FDSYDYVSSV 245
S +F M+ + + P+E T++GLI E L +G+ IHG+ +K + +
Sbjct: 189 DSFGVFKEMVEVKEVRPNEGTMMGLIVACIESKNLKLGRAIHGYMMKDMVLREGVKLEAA 248
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+++Y +C ++ A +F+ + + V W++LI GY Q G + + R++++ K D
Sbjct: 249 LINLYVKCGYLDGARKLFDEIPEKNTVVWNSLICGYCQIGSLNEVIELLREMHLSNLKPD 308
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
++ VL+A A+ G +H + + G V + +AL+DMY+KCG++G +VF+
Sbjct: 309 RFTVSGVLSACAQMGAFNLGNWVHRFAEKKGI-WDVFIGTALIDMYAKCGFIGAARKVFD 367
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M+ERN+ T+N+++ G HG A E F ++ E G PD TF A+L AC H GLV +
Sbjct: 368 QMNERNVATWNAILSGYASHGQAESAIELFSEMRESGARPDSITFLAVLHACAHSGLVEN 427
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G++ F M + Y I + EHY MV LLG AG L+EA I + + V GALLS C
Sbjct: 428 GKQYFDLMLQYYKIPPRVEHYGCMVDLLGRAGLLQEARELIKMMVVEPNVVVWGALLSAC 487
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+GN ++ E AH + + + G V+L+N YA R++ V +R+ +V+ G+ K G
Sbjct: 488 SIHGNIEIGEWAAHHMIKLNAMDGGSYVILANLYASAQRFNRVKAVREMMVEKGICKSHG 547
Query: 546 VSWVS 550
S +
Sbjct: 548 CSMIE 552
>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 291 bits (744), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 167/580 (28%), Positives = 303/580 (52%), Gaps = 37/580 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S + + +ELH + + L D + LV +Y+ ++ A +F +R+
Sbjct: 383 ILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERN 442
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVH 127
+N+++ Y + +A L+ ++ ++PD FT+ + C+ + R +H
Sbjct: 443 EVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIH 502
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
I + + ++ I + LV YS+ ++ A ++F+ +++ + NSMI G+ G
Sbjct: 503 AHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQ 562
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++L+LF M G PD ++L ++S S G+ +H F ++++ + + VLV
Sbjct: 563 EALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLV 622
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVT-------------------------------WSA 276
MYA+C M+ A+ V++ D++ W++
Sbjct: 623 DMYAKCGSMDYAWKVYDQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNS 682
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
++ GY+ +G ++ +F ++ + D + + +++ + + G +H +I+ G
Sbjct: 683 ILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKG 742
Query: 337 F-ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
F SV++ +ALVDMYSKCG + VF+ M+ +NI+++N++I G HG + +A +
Sbjct: 743 FVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILY 802
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
++ +KG+ P+E TF A+L AC H GLV +G IFT M E+Y I+AK EHY MV LLG
Sbjct: 803 EEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGR 862
Query: 456 AGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
AG LE+A F+ + P++P VS GALL C ++ + D+ + A +LFE DP+ V
Sbjct: 863 AGRLEDAKEFVEKM--PIEPEVSTWGALLGACRVHKDMDMGRLAAQRLFELDPQNPGPYV 920
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
++SN YA GRW +V +R + G++K+ GVSW+ +S
Sbjct: 921 IMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINS 960
Score = 224 bits (572), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 122/420 (29%), Positives = 220/420 (52%), Gaps = 4/420 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS---ARILFDKTPQRSVFLWNS 74
S R K +H + D + TK++ LYA + L AR LF++ P+R++ WN+
Sbjct: 86 SFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFEEMPERNLTAWNT 145
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I AYA + + L+ + + D FT+ + +AC D+ G+R + + +G
Sbjct: 146 MILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAG 205
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L + ALV Y++ +D+A+ D + +V N++I+G+ W+++ +FD
Sbjct: 206 LNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTSVVTWNAVIAGYVKILSWEEAWGIFD 265
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
ML++G PD +T + G+ +H + F +V + L+ MYA+C+
Sbjct: 266 RMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAKCD 325
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
S VF+ + + VTW+++I+ +Q G + AL F ++ G K++ + S+L
Sbjct: 326 DEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILM 385
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A+A A++ G +HG+++++ +++ SALVDMYSKCG + QVF ++ ERN ++
Sbjct: 386 ASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCGMVEEAHQVFRSLLERNEVS 445
Query: 375 YNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
YN+++ G G +A E + D+ E G+ PD+ TF+ LL C + N GR+I +
Sbjct: 446 YNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHL 505
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 128/438 (29%), Positives = 215/438 (49%), Gaps = 9/438 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ + + + ++L + V KA L + F LV YA + A D+ S
Sbjct: 181 VIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGWMDDAVTSLDEIEGTS 240
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I Y + +A +F +L+ + PDNFT+A R C G + VH
Sbjct: 241 VVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHS 300
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G D+ +AL+ Y+K + +KVFD + + + V NS+IS A G ++
Sbjct: 301 KLIACGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFND 360
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG--IHGFCLKSSFDSYDYVSSVL 246
+L LF M G + + L ++ + L +G+G +HG +++ +S + S L
Sbjct: 361 ALVLFLRMQESGYKSNRFNLGSIL--MASAGLADIGKGRELHGHLVRNLLNSDIILGSAL 418
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKAD 305
V MY++C + A+ VF SL + V+++AL+ GY Q+G +AL + + + G + D
Sbjct: 419 VDMYSKCGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPD 478
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
++L A N G IH ++I+ +++V + LV MYS+CG L ++F
Sbjct: 479 QFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFN 538
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M+ERN ++NS+I G +G T +A F+ + G+ PD + S++L +C
Sbjct: 539 RMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQK 598
Query: 426 GRE----IFTRMTEEYGI 439
GRE I EE GI
Sbjct: 599 GRELHNFIVRNTMEEEGI 616
>gi|356568696|ref|XP_003552546.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 604
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 183/539 (33%), Positives = 289/539 (53%), Gaps = 22/539 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L ++HA V KA+L +D F A KL+ ++L L SA +F+ P +V L+NSIIR
Sbjct: 33 NLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSIIR 92
Query: 78 AYA--LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
A+A +HR + F+ + + L PDNFTY + +ACS S LP +R +H G
Sbjct: 93 AHAHNSSHRSLPFNAFFQ-MQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGF 151
Query: 136 GRDSITSSALVTAYSKL--SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
D ++L+ +YS+ + +D A+ +F + + D+V NSMI G CG + +LF
Sbjct: 152 YGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLF 211
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSL---LSVGQGIHGFCLKSSFDSYDYVS-SVLVSM 249
D M PD ++S W L G+ F L + VS S +V
Sbjct: 212 DEM------PDR----DMVS--WNTMLDGYAKAGEMDTAFELFERMPWRNIVSWSTMVCG 259
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y++ M+ A +F+ ++V W+ +I GY+++G +A + K+ G + D +
Sbjct: 260 YSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDDGFL 319
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE-TMS 368
S+LAA A+S + G IH + + F V +A +DMY+KCG L VF M+
Sbjct: 320 LSILAACAESGMLGLGKRIHASMRRWRFRCGAKVLNAFIDMYAKCGCLDAAFDVFSGMMA 379
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+++++++NS+I G +HG +A E F ++++G PD TF LLCAC H GLVN+GR+
Sbjct: 380 KKDVVSWNSMIQGFAMHGHGEKALELFSWMVQEGFEPDTYTFVGLLCACTHAGLVNEGRK 439
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M + YGI + EHY M+ LLG G+L+EA+ + S+P + + G LL+ C ++
Sbjct: 440 YFYSMEKVYGIVPQVEHYGCMMDLLGRGGHLKEAFMLLRSMPMEPNAIILGTLLNACRMH 499
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ DLA V QLF+ +P +LSN YA+ G W +V +R + + G K +G S
Sbjct: 500 NDVDLARAVCEQLFKLEPSDPGNYSLLSNIYAQAGDWMNVANVRLQMKNTGGEKPSGAS 558
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 146/326 (44%), Gaps = 25/326 (7%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
++L + +H + + L +D + L+ A+S + A+ VF+ V P++ L NS+I
Sbjct: 32 TNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHVPHPNVHLYNSII 91
Query: 178 SGFAH-CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
AH F M + G PD +T L+ PS L + + IH K F
Sbjct: 92 RAHAHNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKACSGPSSLPLVRMIHAHVEKIGF 151
Query: 237 DSYDYVSSVLVSMYARCN--CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
+V + L+ Y+RC ++ A +F ++ D+VTW+++I G + G+ A F
Sbjct: 152 YGDIFVPNSLIDSYSRCGNAGLDGAMSLFLAMEERDVVTWNSMIGGLVRCGELQGACKLF 211
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-------SVMVSSAL 347
++ D V ++L AK+ + FEL +++ S +
Sbjct: 212 DEM----PDRDMVSWNTMLDGYAKAGE-----------MDTAFELFERMPWRNIVSWSTM 256
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
V YSK G + + +F+ +N++ + ++I G G +A E + + E G+ PD+
Sbjct: 257 VCGYSKGGDMDMARMLFDRCPVKNVVLWTTIIAGYAEKGLAREATELYGKMEEAGMRPDD 316
Query: 408 STFSALLCACCHGGLVNDGREIFTRM 433
++L AC G++ G+ I M
Sbjct: 317 GFLLSILAACAESGMLGLGKRIHASM 342
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 3/112 (2%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
L+ L K N+ IH V++ + V+ L+ +S C +L + VF +
Sbjct: 20 LLEEKLCDLHKCTNLDSVNQIHAQVLKANLHQDLFVAPKLIAAFSLCRHLASAVNVFNHV 79
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEF--FRDIIEKGLNPDESTFSALLCAC 417
N+ YNS+I H ++++ F F + + GL PD T+ LL AC
Sbjct: 80 PHPNVHLYNSIIRAHA-HNSSHRSLPFNAFFQMQKNGLFPDNFTYPFLLKAC 130
>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 716
Score = 290 bits (743), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 287/544 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L S + LHA + K + F T L+ YA+ + SAR FD +
Sbjct: 47 ILKLLVSVECAELAYSLHACIYKLGHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKD 106
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W ++ YA RF D+ LF + P++FT+A + +AC + VHG
Sbjct: 107 MVSWTGMVACYAENDRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHG 166
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + D L+ Y+K ++ ++VF+ + D++ + MIS +A +
Sbjct: 167 CVLKTCYEMDLYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSRE 226
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++LF M R P+++T ++ L +G+ +H LK D +VS+ L+
Sbjct: 227 AVELFGQMRRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMD 286
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+YA+C ++++ +F L + + VTW+ +I GY Q GD KAL ++ + +A V
Sbjct: 287 VYAKCGRLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVT 346
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+SVL A A A + G IH ++ ++ V+V +AL+DMY+KCG + VF+ +S
Sbjct: 347 YSSVLRACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLS 406
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
ER+ I++N++I G +HG +A + F+ + E P++ TF ++L AC + GL++ G+
Sbjct: 407 ERDEISWNAMISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQN 466
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M ++YGI+ EHY MV LLG +G+L++A I +P + V ALL C I+
Sbjct: 467 YFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIH 526
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ DL + A Q+ + DP+ A V+LSN YA RW+ V +R + + G++KE G+SW
Sbjct: 527 NDVDLGIMSAQQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSW 586
Query: 549 VSGS 552
+
Sbjct: 587 IENQ 590
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 116/243 (47%)
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
++I G+ D+ + LF + R G + + ++ L + +H K
Sbjct: 11 TLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSLHACIYKL 70
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
+S +V + L+ YA C +NSA F+++ D+V+W+ ++ Y++ + +L F
Sbjct: 71 GHESNAFVGTALIDAYAVCGSVNSARQAFDAIACKDMVSWTGMVACYAENDRFQDSLQLF 130
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
++ M G + A VL A G +HG V++ +E+ + V L+D+Y+K
Sbjct: 131 AEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVGVGLLDLYTKF 190
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G ++VFE M + ++I ++ +I + +A E F + + P++ TF+++L
Sbjct: 191 GDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRRAFVLPNQFTFASVL 250
Query: 415 CAC 417
+C
Sbjct: 251 QSC 253
>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 273/528 (51%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +HA V K D + V +Y + + F ++ N+++ +
Sbjct: 110 ESIHACVCKYGFESDILISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDT 169
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ + LL +P+ +T+ I + C+ DL + +HG I SG+ DS
Sbjct: 170 ETCDQGPRILIQLLVEGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLW 229
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LV Y+K + A KVF + + D+V ++I+GF G+ L++F+ ML G
Sbjct: 230 NSLVNVYAKCGSANYACKVFGEIPERDVVSWTALITGFVAEGY-GSGLRIFNQMLAEGFN 288
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ YT + ++ S + +G+ +H +K+S D D+V + LV MYA+ + A +
Sbjct: 289 PNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETI 348
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN L DL W+ ++ GY+Q G KA+ F ++ +G K + +AS L+ ++ A +
Sbjct: 349 FNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATL 408
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H I+ G + V+SALVDMY+KCG + VF+ + R+ +++N++I G
Sbjct: 409 DSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGY 468
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A + F ++++G PDE TF +L AC H GL+ +G++ F +++ YGI
Sbjct: 469 SQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPT 528
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV +LG AG E SFI + + + +L C ++GN + E A +LF
Sbjct: 529 IEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLF 588
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E +P + ++LSN +A G WDDV +R + G++KE G SWV
Sbjct: 589 ELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKEPGCSWVE 636
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 182/380 (47%), Gaps = 3/380 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S L+ K +H V K+ + D LV +YA A +F + P+R
Sbjct: 197 ILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPERD 256
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I + +A + +F +L P+ +T+ I R+CS SD+ + VH
Sbjct: 257 VVSWTALITGF-VAEGYGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHA 315
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + L + +ALV Y+K +++A +F+ + DL +++G+A G +K
Sbjct: 316 QIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEK 375
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++ F M R G P+E+TL +SG + L G+ +H +K+ +V+S LV
Sbjct: 376 AVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVD 435
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C C+ A VF+ L D V+W+ +I GYSQ G GKAL F + +G D V
Sbjct: 436 MYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVT 495
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
VL+A + + G + + +G ++ + +VD+ + G E M
Sbjct: 496 FIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEM 555
Query: 368 S-ERNIITYNSVILGLGLHG 386
N++ + +V+ +HG
Sbjct: 556 KLTSNVLIWETVLGACKMHG 575
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 194/403 (48%), Gaps = 1/403 (0%)
Query: 29 VAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDA 88
V K + D + LV +Y L AR + ++ P + V WN + + + +A
Sbjct: 15 VIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSANSPYPLQEA 74
Query: 89 KSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
LF + T+++ + F +A + A + D +H G D + S+A VT
Sbjct: 75 VQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAFVTM 134
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y K ++ + F + +L N+++SGF D+ ++ +L G P+ YT
Sbjct: 135 YMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNMYTF 194
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
+ ++ L+ G+ IHG +KS + ++ + LV++YA+C N A VF +
Sbjct: 195 ISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGEIPE 254
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D+V+W+ALITG+ +G YG L F ++ +G + S+L + + ++V G +
Sbjct: 255 RDVVSWTALITGFVAEG-YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQV 313
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
H ++++ + + V +ALVDMY+K +L +F + +R++ + ++ G G
Sbjct: 314 HAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQG 373
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+A + F + +G+ P+E T ++ L C ++ GR++ +
Sbjct: 374 EKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHS 416
>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g23330-like [Cucumis
sativus]
Length = 712
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 173/568 (30%), Positives = 292/568 (51%), Gaps = 33/568 (5%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +S S+ ++LHA V K + L+ +Y+ N+L + LF+ W S
Sbjct: 18 SIKSRSQAQQLHAQVLKFQASSL-CNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+IR Y + + F +L + L PD+ + + ++C+ DL +HG I G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 135 LGRDSITSSALVTAYSKLSLIDEA--------------------------------IKVF 162
L D T +AL+ YSKL ++E+ K+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
+ + + DLV N++I+G A G ++++L++ M PD +TL ++ + E +S
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G+ IHG ++ D+ YV+S L+ MYA+C + + VF L D ++W+++I G
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q G + + L +FR++ M K +S++ A A + G +HGY+ ++GF+ ++
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIF 376
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
++S+LVDMY+KCG + Q+F+ M R+++++ ++I+G LHG A E F + +G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ P+ F A+L AC HGGLV++ + F MT ++GI EHY + LLG AG LEEA
Sbjct: 437 IKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496
Query: 463 YSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAED 522
Y FI + ++ LLS C ++ N D+AE VA+++ E DP ++L+N Y+
Sbjct: 497 YDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 556
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
RW + K R + G+RK SW+
Sbjct: 557 RRWKEAAKWRASMRRIGIRKTPACSWIE 584
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 146/334 (43%), Gaps = 24/334 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQR 67
VL L + +SR KE+H + L D + A+ L+ +YA V S R+ F +R
Sbjct: 245 VLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRV-FTLLTER 303
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
WNSII F++ F+ +L ++KP +++++ I AC+ + L + +H
Sbjct: 304 DGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLH 363
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G +G + +S+LV Y+K I A ++FD + D+V +MI G A G
Sbjct: 364 GYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAP 423
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+++LF+ M G P+ + +++ GL + + F + + Y V
Sbjct: 424 DAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAV 483
Query: 243 SSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
S +L R + AY + P W+ L++ + A K+ +
Sbjct: 484 SDLL----GRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMA----EKVANRI 535
Query: 302 KKADP------VLIASVLAAAA--KSANVWPGAV 327
+ DP +L+A++ +AA K A W ++
Sbjct: 536 LEVDPNNTGAYILLANIYSAARRWKEAAKWRASM 569
>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33680-like [Vitis vinifera]
Length = 773
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 296/549 (53%), Gaps = 3/549 (0%)
Query: 3 FNLHF--LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
FN H ++L+ S ++L R +++H V K D F T L+ +Y+ L +A +
Sbjct: 177 FNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKV 236
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
+ + V N +I Y A A +F +LL + L+P+++T+ + AC+ + D+
Sbjct: 237 YSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDV 296
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
LR +HG I G G + +A+V+ Y K +++EA K F G+ + +LV +++SG+
Sbjct: 297 EVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGY 356
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G K+L+ F +L LG D L+ G E L +G IHGF +K +
Sbjct: 357 VKNGNGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDV 416
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + L+ +YA+C + SA VF+SL ++V+++A+++GY D A+ F +L +
Sbjct: 417 SVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYIG-ADEEDAMALFSQLRLA 475
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
K D V A +L+ +A A + G +H Y+I+ GFE + V +A++ MY+KCG +G
Sbjct: 476 DIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDA 535
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
Q+F +M+ + I++N+VI LHG +A F ++ ++ PDE T ++L AC +
Sbjct: 536 CQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYS 595
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GL+ +G +F M +YGI+ + EH+ MV LLG AG L EA SFI P P +
Sbjct: 596 GLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRT 655
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
L+ C ++G+ + +I + L + P + +++SN YA G ++ ++R + D +
Sbjct: 656 LVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKV 715
Query: 541 RKEAGVSWV 549
KEAG SW+
Sbjct: 716 SKEAGSSWI 724
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 204/416 (49%), Gaps = 7/416 (1%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
FN +L++S L + +HA +AK D F LV LY N L A+ +F
Sbjct: 77 LFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVF 136
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNF---TYACITRACSENS 118
D+ R+ W ++I+ + + ND +S+F+ + F T + I +AC
Sbjct: 137 DEMLVRNTITWTTLIKGHL---QVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLE 193
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
+L +HG I G D ++L++ YS+ + A KV+ ++ D+ N MIS
Sbjct: 194 NLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMIS 253
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
+ G +K++ +F +L G P++YT +IS + V + +HG C+K
Sbjct: 254 EYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVLRVLHGMCIKCGCGD 313
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
V + +VS+Y + + A F + +LV+W+AL++GY + G+ KAL F ++
Sbjct: 314 EISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLVSWTALLSGYVKNGNGKKALEGFSQIL 373
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
G D A++L ++ N+ G IHG+V++ G+ V V +AL+D+Y+KC L
Sbjct: 374 ELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDVSVGTALIDLYAKCRKLR 433
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
VF ++ ++NI+++N+++ G + A F + + PD TF+ LL
Sbjct: 434 SARLVFHSLLDKNIVSFNAILSGY-IGADEEDAMALFSQLRLADIKPDSVTFARLL 488
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 139/284 (48%)
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D+ + LV Y K + + +A VFD + + + ++I G + ++
Sbjct: 108 GYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKGHLQVNDVESVFRIA 167
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M +G+ +E+T ++ L G+ IHGF +K FD +V + L+SMY+RC
Sbjct: 168 REMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDEDVFVGTSLISMYSRC 227
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ +A V+++L + D+ + +I+ Y + G KA+ F L G + + +V+
Sbjct: 228 GDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVI 287
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+A +V V+HG I+ G + V +A+V +Y K G L + F M ERN++
Sbjct: 288 SACNGDIDVEVLRVLHGMCIKCGCGDEISVGNAIVSVYVKHGMLEEAEKSFCGMGERNLV 347
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++ +++ G +G +A E F I+E G+ D F+ LL C
Sbjct: 348 SWTALLSGYVKNGNGKKALEGFSQILELGVGFDSCCFATLLDGC 391
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 104/197 (52%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +GQ IH F K + + + + LV++Y + N + A VF+ + + +TW+ LI G
Sbjct: 94 LMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKFNKLGDAQSVFDEMLVRNTITWTTLIKG 153
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
+ Q D R++ G++ + + +L A N+ G IHG+VI+ GF+
Sbjct: 154 HLQVNDVESVFRIAREMYWVGEEFNEHTCSVILQACDSLENLVRGEQIHGFVIKRGFDED 213
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V V ++L+ MYS+CG LG +V+ ++ +++ N +I G G +A F ++
Sbjct: 214 VFVGTSLISMYSRCGDLGAAEKVYSNLAYKDVRCLNFMISEYGKAGCGEKAIGVFLHLLG 273
Query: 401 KGLNPDESTFSALLCAC 417
GL P++ TF+ ++ AC
Sbjct: 274 SGLEPNDYTFTNVISAC 290
>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 858
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/529 (31%), Positives = 275/529 (51%), Gaps = 2/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L+ K L D F A LV +Y+ + A +F V WN+II L
Sbjct: 203 RKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVL- 261
Query: 83 HRFND-AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
H ND A L + + +P+ FT + +AC+ R +H I D
Sbjct: 262 HDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFA 321
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ LV YSK ++D+A + +D + D++ N++ISG++ CG ++ LF M
Sbjct: 322 AVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDI 381
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
++ TL ++ + + V + IH +KS S YV + L+ Y +CN ++ A
Sbjct: 382 DFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASK 441
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F DLV ++++IT YSQ GD +AL + ++ K DP + +S+L A A +
Sbjct: 442 IFEERTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSA 501
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G +H + I+ GF + S++LV+MY+KCG + + F + R I++++++I G
Sbjct: 502 YEQGKQLHVHAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGG 561
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG +A F ++ G+ P+ T ++LCAC H GLVN+G++ F +M +GI+
Sbjct: 562 YAQHGHGKEALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKP 621
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY M+ LLG +G L EA + S+P D V GALL I+ N +L + A L
Sbjct: 622 TQEHYACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKML 681
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
F+ +P K V+L+N YA G W++V K+R + D+ ++KE G+SW+
Sbjct: 682 FDLEPEKSGTHVLLANIYASAGMWENVAKVRKFMKDSKVKKEPGMSWIE 730
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/464 (26%), Positives = 224/464 (48%), Gaps = 5/464 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + L+ +++H + D F A LV +YA +L +R LF +R+
Sbjct: 88 VLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLVVMYAKCGLLDDSRRLFGGIVERN 147
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS--ENSDLPGLRFV 126
V WN++ Y + +A LFK ++R+ + P+ F+ + I AC+ + DL R +
Sbjct: 148 VVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLG--RKI 205
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG + GL D +++ALV YSK I+ A+ VF ++ PD+V N++I+G
Sbjct: 206 HGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCN 265
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
D +L L D M G P+ +TL + +G+ +H +K S + + L
Sbjct: 266 DLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGL 325
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MY++C M+ A ++S+ D++ W+ALI+GYSQ GD+ A+ F K+ + +
Sbjct: 326 VDMYSKCEMMDDARRAYDSMPKKDIIAWNALISGYSQCGDHLDAVSLFSKMFSEDIDFNQ 385
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+++VL + A + IH I+ G V ++L+D Y KC ++ ++FE
Sbjct: 386 TTLSTVLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEE 445
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ +++ Y S+I +G +A + + + + + PD S+LL AC + G
Sbjct: 446 RTWEDLVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQG 505
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+++ ++G +V + G++E+A +P
Sbjct: 506 KQLHVHAI-KFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIP 548
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 197/394 (50%), Gaps = 6/394 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
ELHA + K RDP LV LY+ AR L D++ + V W+S++ Y
Sbjct: 2 ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A +F + +K + FT+ + +ACS DL R VHG A+V+G D ++
Sbjct: 62 FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
LV Y+K L+D++ ++F G+ + ++V N++ S + +++ LF M+R G P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181
Query: 204 DEYT---LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+E++ ++ +GL E L G+ IHG LK D + ++ LV MY++ + A
Sbjct: 182 NEFSISIILNACAGLQEGDL---GRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAV 238
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + HPD+V+W+A+I G AL ++ G + + ++S L A A
Sbjct: 239 AVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMG 298
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G +H +I+ + + LVDMYSKC + + +++M +++II +N++I
Sbjct: 299 FKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNALIS 358
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G G A F + + ++ +++T S +L
Sbjct: 359 GYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVL 392
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 164/310 (52%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I G RD + LVT YSK A K+ D S+ D+V +S++SG+ GF
Sbjct: 3 LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNGF 62
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++L +F+ M LG +E+T ++ L++G+ +HG + + F+S +V++
Sbjct: 63 VEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANT 122
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MYA+C ++ + +F + ++V+W+AL + Y Q G+A+ F+++ G +
Sbjct: 123 LVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMPN 182
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
I+ +L A A G IHG +++ G +L ++ALVDMYSK G + + VF+
Sbjct: 183 EFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGAVAVFQ 242
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
++ +++++N++I G LH A ++ G P+ T S+ L AC G
Sbjct: 243 DIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKEL 302
Query: 426 GREIFTRMTE 435
GR++ + + +
Sbjct: 303 GRQLHSSLIK 312
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 148/323 (45%), Gaps = 14/323 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S Q++ K++H + K+ + D + L+ Y N + A +F++
Sbjct: 391 VLKSVASLQAIKVCKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWED 450
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ + S+I AY+ +A L+ + +KPD F + + AC+ S + +H
Sbjct: 451 LVAYTSMITAYSQYGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHV 510
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI G D S++LV Y+K I++A + F + + +V ++MI G+A G +
Sbjct: 511 HAIKFGFMCDIFASNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKE 570
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-----FCLKSSFDSYDYVS 243
+L+LF+ MLR G P+ TLV ++ L++ G+ F +K + + Y
Sbjct: 571 ALRLFNQMLRDGVPPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHY---- 626
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY---GKALYYFRKLNM 299
+ ++ + R +N A + NS+ F D W AL+ + KA L
Sbjct: 627 ACMIDLLGRSGKLNEAVELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEP 686
Query: 300 QGKKADPVLIASVLAAAAKSANV 322
+ K VL+A++ A+A NV
Sbjct: 687 E-KSGTHVLLANIYASAGMWENV 708
>gi|225450537|ref|XP_002277327.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570 [Vitis vinifera]
Length = 607
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 266/511 (52%), Gaps = 2/511 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
AT L++ Y ++ AR LFD+ P+R V W +I Y + A +F ++ +L
Sbjct: 46 ATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMNEEL 105
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL-IDEAI 159
P+ FT + + +AC L R VHG AI GL +AL+ Y+ + +D+A
Sbjct: 106 DPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDAC 165
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
VF G+ + V ++I+G+ H L++F ML + ++ +
Sbjct: 166 MVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIG 225
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
+ G+ +H K F+S V + ++ MY RC+C + A F + DL+TW+ LI
Sbjct: 226 SHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNTLIA 285
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
GY ++ + ++LY F + +G + S++AA A A + G IHG +I+ G +
Sbjct: 286 GY-ERSNPTESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRRGLDG 344
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
++ +S+AL+DMYSKCG + QVF MS R+++++ ++++G G HG+ +A E F ++
Sbjct: 345 NLALSNALIDMYSKCGNIADSHQVFGGMSRRDLVSWTAMMIGYGTHGYGEEAVELFDKMV 404
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+ PD F A+L AC H GLV++G F M +Y I E Y +V LLG AG +
Sbjct: 405 RSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLMVGDYNISPDQEIYGCVVDLLGRAGKV 464
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
EEAY I S+P D V G L C + +L ++ AH++ + P VMLSN Y
Sbjct: 465 EEAYELIESMPFKPDECVWGPFLGACKAHTFPNLGKLAAHRILDLRPHMAGTYVMLSNIY 524
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A DG+W + +LR + G +KE G SWV
Sbjct: 525 AADGKWGEFARLRKLMKRMGNKKETGRSWVE 555
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 195/408 (47%), Gaps = 42/408 (10%)
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+ ++ L+ +Y LI EA +FD + + D+V MI+G+ C + +F M+
Sbjct: 43 SVLATTLIKSYFGKGLIGEARTLFDEMPERDVVAWTVMIAGYTSCNNHTHAWMVFCEMMN 102
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC-MN 257
P+ +T+ ++ LS G+ +HG +K D + YV + L+ MYA C M+
Sbjct: 103 EELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMD 162
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF + + V+W+ LI GY+ + D L FR++ ++ + +P + + A
Sbjct: 163 DACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACT 222
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G +H V +HGFE ++ V ++++DMY +C + F M++R++IT+N+
Sbjct: 223 SIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRCSCFSEANRYFYEMNQRDLITWNT 282
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G T ++ F + +G +P+ TF++++ AC +N G++I R+
Sbjct: 283 LIAGYERSNPT-ESLYVFSMMESEGFSPNCFTFTSIMAACATLAFLNCGQQIHGRIIRR- 340
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GL GNL A+S AL+ GN +A+
Sbjct: 341 ----------------GLDGNL----------------ALSNALIDMYSKCGN--IAD-- 364
Query: 498 AHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
+HQ+F R+ ++ M+ Y G ++ ++L D +V +G+R +
Sbjct: 365 SHQVFGGMSRRDLVSWTAMMIG-YGTHGYGEEAVELFDKMVRSGIRPD 411
>gi|357502061|ref|XP_003621319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496334|gb|AES77537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 605
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 176/531 (33%), Positives = 283/531 (53%), Gaps = 15/531 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA + K L +DP+ A KL+ Y+L N L SA +F++ P +V L+N +IRAY+L+
Sbjct: 39 KQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSSAVNVFNQVPDPNVHLYNYLIRAYSLS 98
Query: 83 HRFNDAKSLFKNLLRTQLK---PDNFTYACITRACSENSD-LPGLRFVHGGAIVSGLGRD 138
+++ F LL+ + DNFTY + + C+ +S L ++ VH G D
Sbjct: 99 GNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWD 158
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L+ Y + ++ A+KVF G+ + D+V NSM+ G G D +L++FD M
Sbjct: 159 IFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPE 218
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYARCNCMN 257
+ L G G+ F L D VS S +V Y++ M+
Sbjct: 219 RDRVSWNTMLDGFTKA---------GEMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMD 269
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ +LV W+ +I+GY+++G +A+ ++ G + D S+LAA A
Sbjct: 270 MARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMNLCDEMEKSGLRLDDGFFISILAACA 329
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM-SERNIITYN 376
+S + G +H ++ F S V ++ +DMY+KCG + +VF M +E++++++N
Sbjct: 330 ESGMLGLGKKMHDSFLRSRFRCSTKVLNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWN 389
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I G G+HG ++ E F ++ +G PD TF LLCAC H GLVN+GR F M
Sbjct: 390 SMIHGFGIHGHGEKSIELFNTMVREGFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRV 449
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
YGI + EHY MV LLG G+L+EA+ + S+P + + G LL C ++ + LA
Sbjct: 450 YGIVPQIEHYGCMVDLLGRGGHLKEAFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATS 509
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
V+ LF+ P +LSN YA+ G W +V K+R + D G +K +GVS
Sbjct: 510 VSKYLFKLVPSDPGNFSLLSNIYAQSGDWINVAKVRKQMNDEGGQKPSGVS 560
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 164/382 (42%), Gaps = 16/382 (4%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F FL+ + S LS K +HA V K D F L+ Y + A +F
Sbjct: 124 FTYPFLLKGCNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFS 183
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+R V WNS++ + A +F + N T+A +
Sbjct: 184 GMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAGEMDKAFKL 243
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ RD ++ S +V YSK +D A +FD +LVL ++ISG+A
Sbjct: 244 FERM--------AERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAE 295
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +++ L D M + G D+ + +++ E +L +G+ +H L+S F V
Sbjct: 296 KGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKV 355
Query: 243 SSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ + MYA+C C++ A+ VFN + DLV+W+++I G+ G K++ F + +G
Sbjct: 356 LNSFIDMYAKCGCVDDAFRVFNGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVREG 415
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGL 359
K D +L A + V G + Y +Q + + + +VD+ + G+L
Sbjct: 416 FKPDRYTFIGLLCACTHAGLVNEGRG-YFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKE 474
Query: 360 GIQVFETMSERNIITYNSVILG 381
+ +M N++ILG
Sbjct: 475 AFWLVRSMP----FEPNAIILG 492
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 157/336 (46%), Gaps = 19/336 (5%)
Query: 105 FTYACITRACSEN-SDL-----PG-LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
FT+ + R EN +DL P ++ +H I L +D + L+ +YS + +
Sbjct: 13 FTWFSLRRHLEENITDLHKCTNPNHIKQIHAQLIKCHLHQDPYIAPKLIASYSLTNNLSS 72
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL---GKTPDEYTLVGLISG 214
A+ VF+ V DP++ L N +I ++ G SL F +L++ G D +T L+ G
Sbjct: 73 AVNVFNQVPDPNVHLYNYLIRAYSLSGNESNSLCAFGVLLKMHVDGVLADNFTYPFLLKG 132
Query: 215 L-WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
S LS+ + +H K F +V + L+ Y RC + A VF+ + D+V+
Sbjct: 133 CNGSSSWLSLVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDVEMAMKVFSGMEERDVVS 192
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W++++ G + GD AL F ++ + D V ++L K+ + +
Sbjct: 193 WNSMVGGLVKNGDLDGALKVFDEM----PERDRVSWNTMLDGFTKAGEMDKAFKL----F 244
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ E ++ S +V YSK G + + +F+ +N++ + ++I G G +A
Sbjct: 245 ERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAEKGQVKEAMN 304
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ + GL D+ F ++L AC G++ G+++
Sbjct: 305 LCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKM 340
>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
Length = 746
Score = 290 bits (742), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 172/515 (33%), Positives = 281/515 (54%), Gaps = 7/515 (1%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
F KLV + + AR LFDK P VFLWN+I+R Y+ F A ++ +
Sbjct: 108 FLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+ PD F++ C+ +ACS L R VHG G D + LV Y+K I A
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRA 227
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
VF + D +V S+ISG+A G ++L++F M + PD LV ++ +
Sbjct: 228 NAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDV 287
Query: 219 SLLSVGQGIHGFCLKSSFD-SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
L G+ IHG +K + +D + S L S+YA+C + A FN + +P L+ W+A+
Sbjct: 288 EDLEHGKSIHGCVIKMGLECEFDLLIS-LTSLYAKCGHVMVARLFFNQVENPSLIFWNAM 346
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I+GY + G +A+ FR + + + D + + S +AA A+ ++ + Y+ F
Sbjct: 347 ISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEF 406
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
V+V+++L+D Y+KCG + + VF+ + +++++ ++++++G GLHG ++ F
Sbjct: 407 RNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHA 466
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ + G++P++ TF LL AC + GLV +G ++F RM +YGI+ + +HY +V LLG AG
Sbjct: 467 MRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRM-RDYGIEPRHQHYACVVDLLGRAG 525
Query: 458 NLEEAYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
+L+ AY+F+ ++ P++P VS GALLS C I+ + L E A +LF DP + V L
Sbjct: 526 HLDRAYNFVMNM--PIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQL 583
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
SN YA WD V K+R + + GL K G S +
Sbjct: 584 SNLYASSCLWDCVAKVRVLMREKGLTKHLGYSVIE 618
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 172/347 (49%), Gaps = 7/347 (2%)
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
L FN+ K + + KPD F + I + + L ++ +V+GL
Sbjct: 56 LTTHFNNNKD---DCNESTFKPDKFYASLIDDSIHKTH----LNQIYAKLLVTGLQYGGF 108
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+ LV S + + A K+FD DPD+ L N+++ ++ GF+ +++++ M
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVAC 168
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+PD ++ ++ L +G+ +HG + F+S +V + LV++YA+C + A
Sbjct: 169 VSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRAN 228
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF L +V+W+++I+GY+Q G +AL F ++ + D + + SVL A
Sbjct: 229 AVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVE 288
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G IHG VI+ G E + +L +Y+KCG++ + F + ++I +N++I
Sbjct: 289 DLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMIS 348
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
G +G+ +A E FR + K + PD T ++ + AC G + R
Sbjct: 349 GYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELAR 395
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 161/349 (46%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + +L + +H + + D F LV LYA + A +F + R+
Sbjct: 179 VLKACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKCGEIVRANAVFGRLVDRT 238
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W SII YA + +A +F + +T ++PD + RA ++ DL + +HG
Sbjct: 239 IVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIHG 298
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I GL + +L + Y+K + A F+ V +P L+ N+MISG+ G+ ++
Sbjct: 299 CVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAEE 358
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++LF M PD T+ I+ + L + + + + S F + V++ L+
Sbjct: 359 AIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLID 418
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
YA+C ++ A VF+ + D+V WSA++ GY G +++ F + G + V
Sbjct: 419 TYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDVT 478
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+L A S V G + + +G E + +VD+ + G+L
Sbjct: 479 FVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLLGRAGHL 527
>gi|224124484|ref|XP_002319343.1| predicted protein [Populus trichocarpa]
gi|222857719|gb|EEE95266.1| predicted protein [Populus trichocarpa]
Length = 848
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/526 (30%), Positives = 284/526 (53%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H + K DP+ T L+ +Y+ ++ A +FD+ + LWN++I AY
Sbjct: 277 QVHCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNG 336
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R D ++K + Q+ PD+ T + +C R +H + + + S
Sbjct: 337 RSYDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQS 396
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+T YSK D+A +F+ + D+V SMISGF + ++L+ ++ M G+ P
Sbjct: 397 ALLTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKP 456
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D + ++S +++G IHG +KS + +V+S LV MY++ N + +VF
Sbjct: 457 DSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVF 516
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + +LV W+++I+ Y + G ++ F ++ G D V I SVL + + A +
Sbjct: 517 SDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSITSVLVSVSSVAVLR 576
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +HGY+I+ + + +AL+DMY KCG+L +F+ M + N++T+N +I G G
Sbjct: 577 KGKAVHGYLIRQRIPSDLQLENALIDMYIKCGFLKYAQHIFQNMLQTNLVTWNIMIAGCG 636
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG +A F ++ G+ PD+ TF +LL +C H G + +G ++F MT E+GI+ +
Sbjct: 637 SHGDWLKAMSLFDEMRSFGIAPDDITFISLLTSCNHCGFIEEGLKLFQLMTVEHGIEPRM 696
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY+ +V LLG AG L++AY+F+ +LP D ++ +LL C ++ N +L ++ AH+L +
Sbjct: 697 EHYVNIVDLLGRAGRLDDAYAFVKNLPIEPDRSIWLSLLCSCRVHHNVELGKLAAHKLLD 756
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P +G+ V L N Y E+ D LR + + GL+K G SW+
Sbjct: 757 IEPSRGSNYVQLLNLYGENELQDRAANLRASMKEKGLKKTPGCSWI 802
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 190/400 (47%), Gaps = 1/400 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQ 66
L + L S L K++H + DPF + L+ +Y + L + R+ + +
Sbjct: 159 LCILLGASDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDK 218
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+V WN +I + + ++ ++ +K + ++ AC + + V
Sbjct: 219 GNVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQV 278
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + G D ++L+T YSK L+++A VFD VS L N+MIS + G
Sbjct: 279 HCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRS 338
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
L+++ M L PD T ++S G+ IH +K S + S L
Sbjct: 339 YDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSAL 398
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MY++C + A +FN++ D+V W ++I+G+ Q Y +AL ++ + + G+K D
Sbjct: 399 LTMYSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDS 458
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
++ASV++A NV G IHG I+ G E V V+S+LVDMYSK + + VF
Sbjct: 459 DIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDMYSKFNFPKMSGNVFSD 518
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
M +N++ +NS+I +G + F + + GL PD
Sbjct: 519 MPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPD 558
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 190/422 (45%), Gaps = 15/422 (3%)
Query: 18 SLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ-----RSVFL 71
+L K +H+ ++ K DP+ T L+ Y +A +FDK P+ + V
Sbjct: 64 NLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSFGNAVKVFDKLPESEVSGQDVTF 123
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQL---KPDNFTYACITRACSENSDLPGLRFVHG 128
WNSI+ Y RF K R QL +PD ++ CI S+ L + +HG
Sbjct: 124 WNSIVNGY---FRFGHKKEGIAQFCRMQLFGVRPDAYSL-CILLGASD-GHLGYAKQIHG 178
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMISGFAHCGFWD 187
++ D S L+ Y +A ++F + D ++V N MI GF G W+
Sbjct: 179 YSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKGNVVAWNVMIGGFGENGLWE 238
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
SL+++ + +S + +S G +H +K F++ YV + L+
Sbjct: 239 NSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVHCDLVKLGFENDPYVCTSLL 298
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MY++C + A +VF+ + W+A+I+ Y G L ++++ + D +
Sbjct: 299 TMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSYDGLKIYKQMKVLQIPPDSL 358
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+VL++ + G +IH +++ + +V + SAL+ MYSKCG +F T+
Sbjct: 359 TATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTMYSKCGNSDDANSIFNTI 418
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
R+++ + S+I G + +A EF+ + G PD ++++ AC VN G
Sbjct: 419 KGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGC 478
Query: 428 EI 429
I
Sbjct: 479 TI 480
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 178/394 (45%), Gaps = 11/394 (2%)
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG-RDSITSSALVTAYSKLSLI 155
R L FTY + +AC S+L + +H I G D +++L+ Y K
Sbjct: 42 RNPLNATRFTYPSLLKACGFLSNLQYGKTIHSTIITKGFFYSDPYITTSLINFYFKCGSF 101
Query: 156 DEAIKVFDG-----VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
A+KVFD VS D+ NS+++G+ G + + F M G PD Y+L
Sbjct: 102 GNAVKVFDKLPESEVSGQDVTFWNSIVNGYFRFGHKKEGIAQFCRMQLFGVRPDAYSLCI 161
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP- 269
L+ L + IHG+ ++ F ++ S L+ MY C A+ +F L
Sbjct: 162 LLGA--SDGHLGYAKQIHGYSVRKVFYGDPFLESGLIYMYFSCGRPLDAWRLFKELEDKG 219
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
++V W+ +I G+ + G + +L + + K S L+A + V G +H
Sbjct: 220 NVVAWNVMIGGFGENGLWENSLEVYLLAKNENVKLVSASFTSTLSACCQGEFVSFGMQVH 279
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
+++ GFE V ++L+ MYSKC + VF+ +S + +N++I +G +Y
Sbjct: 280 CDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRSY 339
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+ ++ + + PD T + +L +CC G + GR I + + IQ+ +
Sbjct: 340 DGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKR-PIQSNVALQSAL 398
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+ + GN ++A S I++ K D G+++S
Sbjct: 399 LTMYSKCGNSDDANS-IFNTIKGRDVVAWGSMIS 431
>gi|255568474|ref|XP_002525211.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535508|gb|EEF37177.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 654
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 174/566 (30%), Positives = 299/566 (52%), Gaps = 35/566 (6%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ K+LHA + S+ + + A+KLV LY+ N L AR +FD+ P ++ F +N+++ +Y+
Sbjct: 42 QAKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKNTFSYNAMLISYS 101
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN--SDLPGLRFVHGGAIVSGLGRD 138
L +R DA LF +L + L +N + C+ ++ S SD+ + VHG + +G D
Sbjct: 102 LHNRHGDALDLFSSLASSNL-VNNISITCLLKSLSSFTLSDVKLGKEVHGFVLRTGFDAD 160
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+AL+T YSK +D + KVFD ++ D+V NSMISG++ G ++ L+ M+
Sbjct: 161 VFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGLYEDCKTLYREMVD 220
Query: 199 L-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P+ T+V ++ + L+ G +H F + + + V + L+ +YA+C ++
Sbjct: 221 FSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLD 280
Query: 258 SAYHVFNSLFHPD-------------------------------LVTWSALITGYSQQGD 286
A +F+ + D L TW+A+ITG Q
Sbjct: 281 YARELFDEMSEKDEVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNR 340
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ L R++ G + + V ++SVL+ A +++ G IH Y I+ G+ ++ V++A
Sbjct: 341 HEGVLDLVREMQALGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATA 400
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
++DMY+K GYL +VF+ +R+++ + ++I +HG A F +++++G+ PD
Sbjct: 401 IIDMYAKSGYLRGAQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPD 460
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
TF+A+L AC H G+V+ EIF M ++YGIQ EHY +V LG A L EA F+
Sbjct: 461 PVTFTAVLAACAHCGMVDKAWEIFESMFKKYGIQPLVEHYACVVGALGKARRLSEAKEFV 520
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
+P V GALL I + +L + V LFE +P V+++N Y++ GRW
Sbjct: 521 SKMPIEPSAKVWGALLHGASISSDVELGKSVCDYLFEIEPENTGNYVIMANLYSQAGRWK 580
Query: 527 DVMKLRDDIVDNGLRKEAGVSWVSGS 552
+ ++R+ + GL+K G SW+ S
Sbjct: 581 EADEVRERMNKVGLQKIPGSSWIETS 606
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 143/286 (50%), Gaps = 8/286 (2%)
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
L+ L E L + +H + S +Y++S LV++Y++ N + A +VF+ + H +
Sbjct: 30 LLHHLTELRLPLQAKQLHARLILFSVTPENYLASKLVALYSKTNHLAFARYVFDQIPHKN 89
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKL---NMQGKKADPVLIASVLAAAAKSANVWPGAV 327
+++A++ YS +G AL F L N+ + L+ S+ ++ ++V G
Sbjct: 90 TFSYNAMLISYSLHNRHGDALDLFSSLASSNLVNNISITCLLKSL--SSFTLSDVKLGKE 147
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+HG+V++ GF+ V V +AL+ YSKC L L +VF+ M++R+++++NS+I G G
Sbjct: 148 VHGFVLRTGFDADVFVENALITYYSKCYDLDLSRKVFDRMTKRDVVSWNSMISGYSQGGL 207
Query: 388 TYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
+R++++ G P+ T ++L AC + G E+ + + ++
Sbjct: 208 YEDCKTLYREMVDFSGFRPNGVTVVSVLQACGQTQDLAFGMEVHKFIVDNQ-VEIDISVC 266
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
++ L G+L+ A + + D GA++S ++G D
Sbjct: 267 NALIGLYAKCGSLDYARELFDEMSEK-DEVTYGAIISGLMLHGYVD 311
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 141/378 (37%), Gaps = 89/378 (23%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ Q L+ E+H + + D L+ LYA L AR LFD+ ++
Sbjct: 234 VLQACGQTQDLAFGMEVHKFIVDNQVEIDISVCNALIGLYAKCGSLDYARELFDEMSEKD 293
Query: 69 -------------------------------VFLWNSIIRAYALAHRFNDAKSLFKNLLR 97
+ WN++I +R L + +
Sbjct: 294 EVTYGAIISGLMLHGYVDQSLELFRGMKTQILSTWNAVITGLVQNNRHEGVLDLVREMQA 353
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
+P+ T + + + S L G + +H AI G R+ ++A++ Y+K +
Sbjct: 354 LGFRPNAVTLSSVLSTIAYFSSLKGGKEIHSYAIKIGYHRNIYVATAIIDMYAKSGYLRG 413
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +VFD D LV+ ++IS +A G + +L LF ML+ G PD T +++
Sbjct: 414 AQRVFDQSKDRSLVIWTAIISAYAVHGDANLALGLFHEMLKQGIQPDPVTFTAVLAA--- 470
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF-----HPDLV 272
C A C ++ A+ +F S+F P +
Sbjct: 471 -------------C-------------------AHCGMVDKAWEIFESMFKKYGIQPLVE 498
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
++ ++ G GKA R+L+ + + I SA VW GA++HG
Sbjct: 499 HYACVV------GALGKA----RRLSEAKEFVSKMPIEP-------SAKVW-GALLHGAS 540
Query: 333 IQHGFELSVMVSSALVDM 350
I EL V L ++
Sbjct: 541 ISSDVELGKSVCDYLFEI 558
>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Glycine max]
Length = 727
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 173/526 (32%), Positives = 285/526 (54%), Gaps = 5/526 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H + + L + F TKLV + + AR LFD+ VF+WN+IIR+Y+ +
Sbjct: 74 QIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNN 133
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ D +++ + T + PD FT+ + +AC+E D +HG I G G D +
Sbjct: 134 MYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQN 193
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
LV Y+K I A VFDG+ +V S+ISG+A G ++L++F M G P
Sbjct: 194 GLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKP 253
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D LV ++ + L G+ IHGF +K + + L + YA+C + A F
Sbjct: 254 DWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFF 313
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + +++ W+A+I+GY++ G +A+ F + + K D V + S + A+A+ ++
Sbjct: 314 DQMKTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLE 373
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
+ YV + + + V+++L+DMY+KCG + +VF+ S+++++ ++++I+G G
Sbjct: 374 LAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYG 433
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
LHG ++A + + + G+ P++ TF LL AC H GLV +G E+F M +++ I +
Sbjct: 434 LHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCM-KDFEIVPRN 492
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQL 501
EHY +V LLG AG L EA +FI + P++P VS GALLS C IY L E A++L
Sbjct: 493 EHYSCVVDLLGRAGYLGEACAFIMKI--PIEPGVSVWGALLSACKIYRCVTLGEYAANKL 550
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
F DP + V LSN YA WD V +R + + GL K+ G S
Sbjct: 551 FSLDPYNTGHYVQLSNLYASSCLWDCVAHVRVLMREKGLNKDLGYS 596
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 101/206 (49%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + + +H V K L +P L YA ++ A+ FD+ +V +WN++I
Sbjct: 271 LEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWNAMISG 330
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
YA +A +LF ++ +KPD+ T A ++ L +++ S G D
Sbjct: 331 YAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSD 390
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+++L+ Y+K ++ A +VFD SD D+V+ ++MI G+ G +++ L+ M +
Sbjct: 391 IFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQ 450
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVG 224
G P++ T +GL++ L+ G
Sbjct: 451 AGVFPNDVTFIGLLTACNHSGLVKEG 476
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 53/100 (53%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL + + V+K++ D F T L+ +YA + AR +FD+ + V +W+++I
Sbjct: 371 SLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIM 430
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
Y L + +A +L+ + + + P++ T+ + AC+ +
Sbjct: 431 GYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTACNHS 470
>gi|357167761|ref|XP_003581320.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Brachypodium distachyon]
Length = 773
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 283/536 (52%), Gaps = 12/536 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
LS + LH K + + L +Y+ ++ A ILF + ++ V W +I A
Sbjct: 237 LSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMTEDACILFPELTEKDVVSWTGLIGA 296
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y +A LF+ + ++ L+PD +C+ ++++ + H I G
Sbjct: 297 YCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGLGSSANVNRGKAFHAVIIRRNFGDS 356
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ +++L++ Y K L+D A VF + D + M++G+ G K L+L+ M
Sbjct: 357 VLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWSLMVAGYCKAGLDVKCLELYRQMQ- 415
Query: 199 LGKTPDEY-----TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
+ DE+ +LV IS L +GQ +H + +K D + +++ L+ MY RC
Sbjct: 416 -CRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHCYSIKCLLDE-NSITNSLIGMYGRC 473
Query: 254 NCMNSAYHVFN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
A +F + D+VTW+ALI+ YS G AL + ++ + K + + +V
Sbjct: 474 GNFELACKIFAVAKLRRDVVTWNALISSYSHVGRSNDALSLYGQMLTEDVKPNSSTLITV 533
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
++A A A + G ++H YV G E V +S+ALVDMY+KCG LG +F++M +R++
Sbjct: 534 ISACANLAALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDV 593
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+T+N +I G G+HG QA + F ++ + P+ TF A+L ACCH GLV++GR++F R
Sbjct: 594 VTWNVMISGYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSACCHAGLVDEGRKLFIR 653
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
M Y ++ +HY MV LLG +G L+EA + ++P D V G LLS C ++ N +
Sbjct: 654 MG-GYRLEPNLKHYACMVDLLGKSGLLQEAEDLVLAMPIKPDGGVWGTLLSACKVHDNFE 712
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ VA + F +DPR Y +++SN+Y +WD++ KLRD + + G+ K GV W
Sbjct: 713 MGLRVAKKAFSSDPRNDGYYILMSNSYGSAEKWDEIEKLRDTMKNYGVEK--GVGW 766
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 131/497 (26%), Positives = 233/497 (46%), Gaps = 18/497 (3%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LHAL + + L P +A KLV Y+ + + A + F +P FLWNS++R++ A
Sbjct: 33 RLHALASTSGLSSRPDFAAKLVSAYSSSGLPGFATLAFSASPCPDTFLWNSLLRSHHCAS 92
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--GRDSIT 141
F+ A S + + + +P FT A +E + LP VH ++ GL G S+
Sbjct: 93 DFDSALSAHRRMRASGARPSRFTAPLAASAAAELAALPVGTSVHSYSVKFGLLAGDGSVA 152
Query: 142 -SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
SS+LV Y++ + +A+K+FD + + D+V +++SG G K + M+RL
Sbjct: 153 VSSSLVYMYARCGSLGDAVKLFDEMVERDVVAWTAVVSGCVRNGECGKGICYLVQMIRLA 212
Query: 200 ---GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G P+ T+ + LS G+ +HG+ +K V S L SMY++C+
Sbjct: 213 GDSGARPNSRTMESGLEACGVLGELSAGRCLHGYAVKEGIRDCALVVSALFSMYSKCDMT 272
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F L D+V+W+ LI Y ++G +A+ F+++ G + D VL++ VL+
Sbjct: 273 EDACILFPELTEKDVVSWTGLIGAYCRRGLAREAVELFQEMEQSGLQPDEVLVSCVLSGL 332
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
SANV G H +I+ F SV+++++L+ MY K + + VF + +R+ +++
Sbjct: 333 GSSANVNRGKAFHAVIIRRNFGDSVLIANSLISMYGKFELVDVAGTVFGMLHQRDDESWS 392
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNP---DESTFSALLCACCHGGLVNDGREIFTRM 433
++ G G + E +R + + + D ++ + + +C G + G+ +
Sbjct: 393 LMVAGYCKAGLDVKCLELYRQMQCRDHDEFLCDITSLVSAISSCSRLGRLRLGQSVHC-- 450
Query: 434 TEEYGIQAKTEHYIYMVKLLGL---AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
Y I+ + L+G+ GN E A D AL+S G
Sbjct: 451 ---YSIKCLLDENSITNSLIGMYGRCGNFELACKIFAVAKLRRDVVTWNALISSYSHVGR 507
Query: 491 SDLAEIVAHQLFENDPR 507
S+ A + Q+ D +
Sbjct: 508 SNDALSLYGQMLTEDVK 524
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 46/97 (47%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + LH+ V L D +T LV +Y L +AR +FD QR V WN +I
Sbjct: 542 ALEHGELLHSYVKNMGLESDVSISTALVDMYTKCGQLGTARGIFDSMLQRDVVTWNVMIS 601
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
Y + N A LF + +KP++ T+ I AC
Sbjct: 602 GYGMHGEANQALKLFSEMEAGSIKPNSLTFLAILSAC 638
>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 780
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 175/574 (30%), Positives = 299/574 (52%), Gaps = 35/574 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQ 66
+LE + + K++HA + + S DP+ A+KL+ YA+++ L A+ +F++ PQ
Sbjct: 75 ILEFIDQCTNTMQLKQIHAHMLRTSRFCDPYTASKLLTAYAISSCSCLIYAKNVFNQIPQ 134
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRF 125
+++ WN++IR YA + + +F ++L + + P+ FT+ + +A S L
Sbjct: 135 PNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSV 194
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG I + L D ++L+ Y D A +VF + D+V N+MI+ FA G
Sbjct: 195 LHGMVIKASLSSDLFILNSLINFYGSSGAPDLAHRVFTNMPGKDVVSWNAMINAFALGGL 254
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
DK+L LF M P+ T+V ++S + L G+ I + + F + +++
Sbjct: 255 PDKALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYIENNGFTEHLILNNA 314
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWS------------------------------ 275
++ MY +C C+N A +FN + D+V+W+
Sbjct: 315 MLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAW 374
Query: 276 -ALITGYSQQGDYGKALYYFRKLNM-QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
ALI+ Y Q G AL F ++ + + K D V + L A+A+ + G IH Y+
Sbjct: 375 NALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIK 434
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+H L+ ++++L+DMY+KCG L ++VF + +++ ++++I L ++G A +
Sbjct: 435 KHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMIGALAMYGQGKAALD 494
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F ++E + P+ TF+ +LCAC H GLVN+G ++F +M YGI + +HY+ +V +
Sbjct: 495 LFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGIVPQIQHYVCVVDIF 554
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G AG LE+A SFI +P P AV GALL C +GN +LAE+ L E +P V
Sbjct: 555 GRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQNLLELEPCNHGAFV 614
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+LSN YA+ G W+ V LR + D+ ++KE S
Sbjct: 615 LLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCS 648
>gi|326507410|dbj|BAK03098.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 698
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 177/531 (33%), Positives = 275/531 (51%), Gaps = 7/531 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH+L KA L + F AT L+ +YA A LFD P+R+ WN+++ Y +
Sbjct: 122 QLHSLAVKAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESG 181
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ A LF + R PD T+A + ++++ + +HG + G I +
Sbjct: 182 KVAPAVQLFVEMEREGFLPDEATFAALLTVVNDSTCFL-MHQLHGKIVKYGSALGLIVLN 240
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GK 201
A +TAYS+ + + ++FD + D DL+ N+M+ +A G ++++ F M+R G
Sbjct: 241 AAITAYSQCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGV 300
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--NCM-NS 258
PD Y+ +IS E G IHG K+ F+ +V + L++MY R NCM
Sbjct: 301 QPDMYSFTSIISACAEHRDHG-GTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMED 359
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
AY F+SL D V+W++++TGYSQ G AL +FR + + D ++ L + +
Sbjct: 360 AYKCFDSLLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSD 419
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IHG VI+ GF + VSS+L+ MYSK G L ++ FE + + + +NS+
Sbjct: 420 LALLRLGRQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSM 479
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G HG F ++E + D TF L+ AC H GLV++G EI M YG
Sbjct: 480 MFGYAQHGKAQAVRSLFNQMLELKVPLDHITFVGLITACSHAGLVDEGSEILNTMESRYG 539
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I + EHY + L G AG L++A I S+P D V LL C ++GN +LA VA
Sbjct: 540 IPLRMEHYACGIDLYGRAGQLDKAKELIDSMPFEPDAMVWMTLLGACRVHGNMELASDVA 599
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L E +PR+ + V+LSN Y+ G W D ++ ++ + GL K G SW+
Sbjct: 600 SHLLEAEPRQHSTYVLLSNMYSGLGMWSDRAIVQKEMKNKGLSKVPGWSWI 650
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 214/423 (50%), Gaps = 9/423 (2%)
Query: 13 SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQRSVFL 71
S+ H +++ + HA + K+ + P +L+ Y++++ L +AR LFD+ P+
Sbjct: 10 SRHHLTIAAVAKSHATLLKSGV-TSPTPWNQLLTAYSVSSPGLAAARRLFDEIPRLDAAS 68
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WNS++ A+ A L + + L + F R+ + +H A+
Sbjct: 69 WNSLLAAHVSIGAHPAACRLLRAMHERGLAANTFALGSALRSAAAMGCSALGTQLHSLAV 128
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+GL + +++AL+ Y+K +A ++FDG+ + + V N++++G+ G ++Q
Sbjct: 129 KAGLADNVFSATALLHMYAKCGRTRDACRLFDGMPERNTVSWNALVAGYVESGKVAPAVQ 188
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF M R G PDE T L++ + + + + Q +HG +K V + ++ Y+
Sbjct: 189 LFVEMEREGFLPDEATFAALLTVVNDSTCFLMHQ-LHGKIVKYGSALGLIVLNAAITAYS 247
Query: 252 RCNCMNSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKADPVLI 309
+C + ++ +F+ + DL++W+A++ Y+ G +A+ +F + G + D
Sbjct: 248 QCGALANSRRIFDEIGDRSDLISWNAMLGAYATHGMEHEAMRFFASMMRASGVQPDMYSF 307
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG---YLGLGIQVFET 366
S+++A A+ + G VIHG V ++GFE V +AL+ MY++ + + F++
Sbjct: 308 TSIISACAEHRD-HGGTVIHGLVSKNGFEGVTHVCNALIAMYTRFSENCMMEDAYKCFDS 366
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ ++ +++NS++ G HG + A FFR + + + DE FSA L +C L+ G
Sbjct: 367 LLLKDTVSWNSMLTGYSQHGLSADALRFFRCMQSENITTDEYAFSAALRSCSDLALLRLG 426
Query: 427 REI 429
R+I
Sbjct: 427 RQI 429
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H LV ++ + F ++ L+ +Y+ + +L A F++ + S WNS++ YA
Sbjct: 427 RQIHGLVIRSGFASNNFVSSSLIFMYSKSGILDDAMKSFEEADKSSSVPWNSMMFGYAQH 486
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ +SLF +L ++ D+ T+ + ACS
Sbjct: 487 GKAQAVRSLFNQMLELKVPLDHITFVGLITACS 519
>gi|297746037|emb|CBI16093.3| unnamed protein product [Vitis vinifera]
Length = 702
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 188/582 (32%), Positives = 278/582 (47%), Gaps = 70/582 (12%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ H V K L D F T L+ +YA + SA ++DK N +I AYA
Sbjct: 133 RRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMTSLDAATCNCLISAYARN 192
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F A +F + +P+++TY+ + C S + + +H + ++
Sbjct: 193 GFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQLHAHVVKMQYLSETAVG 252
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+T YSK +++EA VF+ + +++ + I+GF G + K+L+ F M G
Sbjct: 253 NALLTLYSKCGMMEEAEIVFENLGQRNIISWTASINGFYQHGDFKKALKQFSMMRESGIE 312
Query: 203 PDEYTL------VGLISGLWE--------------------------------------- 217
P+E+T G G W
Sbjct: 313 PNEFTFSIVLASCGCDLGKWMKQRTSSNRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFV 372
Query: 218 -PSLLS---------VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
PS+L G+ +H LK+SF+S Y+ S L+ MY++C + A VF+ +
Sbjct: 373 LPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKCGHVEKACRVFDWI- 431
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
P++V+W+ LI G+SQ D QG V I+S+L A AN+ G
Sbjct: 432 -PNVVSWNTLIAGFSQMLD-------------QGFCPSSVTISSLLPACTNVANLRHGKE 477
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IHGY + G E V V SALVDMY+KCGY+ +F M ERN +T+NS+I G HG+
Sbjct: 478 IHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGY 537
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
+A E F + E D TF+A+L AC H G+V G +F +M E+Y I+ + EHY
Sbjct: 538 CNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFRKMQEKYRIEPRLEHYA 597
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPR 507
MV LLG AG L EAY I ++P D V GALL C +GN +LAE+ A LFE +P
Sbjct: 598 CMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPE 657
Query: 508 KGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++LSN YA+ GRW + K++ + K G SW+
Sbjct: 658 SPGSSLLLSNLYADAGRWGNAAKMKKMMKQRKFGKFPGCSWI 699
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 113/218 (51%)
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P + +S + +G+ H F +K S ++V + L+ MYA+C ++SA
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
V++ + D T + LI+ Y++ G + +A F ++ G + + +++LA
Sbjct: 168 VRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTI 227
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ + G +H +V++ + V +AL+ +YSKCG + VFE + +RNII++ + I
Sbjct: 228 SAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRNIISWTASI 287
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G HG +A + F + E G+ P+E TFS +L +C
Sbjct: 288 NGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASC 325
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 181/454 (39%), Gaps = 83/454 (18%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + + ++ K+LHA V K L + L+ LY+ ++ A I+F+ QR+
Sbjct: 220 MLAVCGTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKCGMMEEAEIVFENLGQRN 279
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS----------ENS 118
+ W + I + F A F + + ++P+ FT++ + +C +S
Sbjct: 280 IISWTASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCDLGKWMKQRTSS 339
Query: 119 DLPG----------LRFVHGGAIVSGLGRDSITSSALVTAYSKLS--LIDEAIK--VFDG 164
+ G + + G + L + +++ A LS E + +
Sbjct: 340 NRWGGQHLMSIFLLRKMIEEGNKPTSLRPNQFVLPSILKACGHLSDRRTGENMHTVILKN 399
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDW----------------MLRLGKTPDEYTL 208
+ D + +++I ++ CG +K+ ++FDW ML G P T+
Sbjct: 400 SFESDAYIISALIYMYSKCGHVEKACRVFDWIPNVVSWNTLIAGFSQMLDQGFCPSSVTI 459
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
L+ + L G+ IHG+ + + YV S LV MYA+C ++ A +F +
Sbjct: 460 SSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPE 519
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
+ VTW++LI GY+ G +A+ F ++ K D + +VL A
Sbjct: 520 RNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNAC------------ 567
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT-----YNSVILGLG 383
S G + LG +F M E+ I Y ++ LG
Sbjct: 568 -----------------------SHAGMVELGESLFRKMQEKYRIEPRLEHYACMVDLLG 604
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G +A++ + + + PD+ + ALL AC
Sbjct: 605 RAGKLSEAYDLIKAM---PVEPDKFVWGALLGAC 635
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ S L+ + V G H +V++ G V ++L+DMY+KCG + ++V++ M+
Sbjct: 116 VFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSAVRVYDKMT 175
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ T N +I +GF QAF+ F I G P+ T+S +L C + +G++
Sbjct: 176 SLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGTISAIQEGKQ 235
Query: 429 IFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEA 462
+ + + +Q +E + ++ L G +EEA
Sbjct: 236 LHAHVVK---MQYLSETAVGNALLTLYSKCGMMEEA 268
>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
lyrata]
Length = 1134
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/495 (31%), Positives = 268/495 (54%), Gaps = 4/495 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+FD P+R+V W +++ + L N + SLF + R + P+ FT++ +AC +
Sbjct: 426 VFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNA 485
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L +HG + G ++LV YSK I+EA KVF + L+ N+MI+G
Sbjct: 486 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAG 545
Query: 180 FAHCGFWDKSLQLFDWM--LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
+ H G+ ++L F M ++ + PDE+TL L+ ++ G+ IHGF ++S F
Sbjct: 546 YVHAGYGSRALATFGMMQEAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 605
Query: 238 --SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
S ++ LV +Y +C + SA F+ + +++WS+LI GY+Q+GD+ +A+ F+
Sbjct: 606 CPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFK 665
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+L + D +++S++ A A + G + V++ L VS++LVDMY KCG
Sbjct: 666 RLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCG 725
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + F M +++I++ +I G G HG +A F ++ + PDE + A+L
Sbjct: 726 LVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLS 785
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H G++ +G E+F+++ E GI+ + EHY +V LLG AG L+EA + ++P +
Sbjct: 786 ACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDLLGRAGRLKEAKHLVDTMPIKPNV 845
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ LLS C ++G+ +L + V L D + A VM+SN Y + G W++ R+
Sbjct: 846 GIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANYVMMSNLYGQAGYWNEQGNARELG 905
Query: 536 VDNGLRKEAGVSWVS 550
GL+KEAG+SWV
Sbjct: 906 SIKGLQKEAGMSWVE 920
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 157/309 (50%), Gaps = 4/309 (1%)
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
F + +SG G + ITS+ L+ Y K A KVFD + + ++V +++SG G
Sbjct: 390 FTNSNFRLSGSGLNLITSNYLIDMYCKCREQLIAYKVFDSMPERNVVSWTALMSGHVLNG 449
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+ SL LF M R G P+E+T + + L G IHGFCLK F+ V +
Sbjct: 450 DLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGN 509
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ--GK 302
LV MY++C +N A VF + L++W+A+I GY G +AL F + +
Sbjct: 510 SLVDMYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKE 569
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL--SVMVSSALVDMYSKCGYLGLG 360
+ D + S+L A + + ++ G IHG++++ GF S ++ +LVD+Y KCG L
Sbjct: 570 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSA 629
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+ F+ + E+ +I+++S+ILG G +A F+ + E D S+++
Sbjct: 630 RKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADF 689
Query: 421 GLVNDGREI 429
L+ G+++
Sbjct: 690 ALLQQGKQM 698
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 125/273 (45%), Gaps = 14/273 (5%)
Query: 23 KELHALVAKASLLRDPFYAT---KLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
K++H + ++ P AT LV LY L SAR FD+ ++++ W+S+I Y
Sbjct: 593 KQIHGFLVRSGF-HCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISWSSLILGY 651
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A F +A LFK L + D+F + I ++ + L + + + G ++
Sbjct: 652 AQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVKLPSGLET 711
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
S++LV Y K L+DEA K F + D++ MI+G+ G K++ +F+ MLR
Sbjct: 712 SVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAVSIFNKMLRH 771
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL-----KSSFDSYDYVSSVLVSMYARCN 254
PDE + ++S ++ G+ + L K + Y + +V + R
Sbjct: 772 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHY----ACVVDLLGRAG 827
Query: 255 CMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
+ A H+ +++ P++ W L++ GD
Sbjct: 828 RLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGD 860
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K++ ALV K + + LV +Y ++ A F + + V W +I
Sbjct: 692 LQQGKQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITG 751
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y A S+F +LR ++PD Y + ACS
Sbjct: 752 YGKHGLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACS 788
>gi|147863814|emb|CAN79347.1| hypothetical protein VITISV_019894 [Vitis vinifera]
Length = 667
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 289/547 (52%), Gaps = 12/547 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L+ + Q+LS +L + + S++ Y T L + ++ A LFD T +R
Sbjct: 55 ILLQAYINSQALSDAHKLLHFMPQPSVVS---YNTILSGYFKFG-LVSEAIKLFDGTSKR 110
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
WN ++ H+ + + F + + ++PDNFTYA I C DL + VH
Sbjct: 111 DCHSWNIVLSGCVKNHKLGEGLTHFMKMRCSSVRPDNFTYAIIIPCC----DLGFGQQVH 166
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ D+ + L+ Y+++ I +A KVFDG+ LV N+MIS ++ G D
Sbjct: 167 ADIVKVCSDLDAFIGTNLLRMYAEVGEIGDARKVFDGMPSRGLVTWNAMISCYSKYGRGD 226
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
KS+ LF + R G + DEYT +++ + +H ++ F S + ++ LV
Sbjct: 227 KSIGLFRQLXREGISADEYTYAIVLNEFAARWQVFEAMQVHSLIIERGFCSDRFTNNALV 286
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
++Y++C + SA +F + D+V+W+ +I G+ Q G +A++ F ++ + + +
Sbjct: 287 NLYSKCGYVASASRLFEEIPDQDVVSWTVIIVGFLQSGHMEEAMWLFYQMQLGDIEPNSF 346
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+L A A + G HG V++ G V+V SA+VDMYSKCG +G ++ F+
Sbjct: 347 TFGGLLGACADANAFQKGRHFHGLVLKFGLLGADVVVGSAVVDMYSKCGEMGDALRAFQE 406
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDII---EKGLNPDESTFSALLCACCHGGLV 423
M ER+I ++N +I G +G +A + + +++ G+ P+E TF +LCAC H GL+
Sbjct: 407 MPERDIASWNGIICGYAQNGAGMKALKLYNEMVLLGPSGIAPNEVTFVGVLCACSHNGLL 466
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+G F M +++ I+ EHY MV LLG AG L+EA + I +LP D + GALL
Sbjct: 467 KEGYSYFKEMVDKHLIKPTAEHYTCMVDLLGRAGLLQEAEALILALPIKPDNVMWGALLG 526
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C ++G+ + A L+ N+PR + V+L+N+Y + G W + +++R+ + G+ K
Sbjct: 527 ACKLHGDVQMTRRTAEHLYTNEPRNSSNYVLLANSYTDIGEWGEAVEIREVMEARGVEKT 586
Query: 544 AGVSWVS 550
AG SWV
Sbjct: 587 AGCSWVE 593
>gi|357474955|ref|XP_003607763.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355508818|gb|AES89960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 871
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 182/554 (32%), Positives = 285/554 (51%), Gaps = 9/554 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L+ + + + T +LH + K++ D F T LV Y+ L AR +FD+ P R
Sbjct: 140 ILLKTASQLRDIVLTTKLHCNILKSNA-ADSFVLTSLVDAYSKCGKLRDARKVFDEIPDR 198
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
SV W S+I AY + LF + L + FT + AC++ L ++VH
Sbjct: 199 SVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVH 258
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS------DPDLVLCNSMISGFA 181
G I +G+ +S +++L+ Y K I +A VFD S DLV +MI G+
Sbjct: 259 GYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYT 318
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G+ +L+LF P+ TL L+S + + +G+ +H +K D
Sbjct: 319 QRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLDDTSL 378
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+S LV MYA+C + A++VF + D+V+W+++I+GY+Q G +AL F ++ M+
Sbjct: 379 RNS-LVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMES 437
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLG 360
D V + VL+A A G +HG+ +++G S+ V +AL++ Y+KCG
Sbjct: 438 FLPDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSA 497
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
VF+ M E+N +T+ ++I G G+ G + FRD++++ L P+E F+ LL AC H
Sbjct: 498 RMVFDGMGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHS 557
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
G+V +G IF M +E +HY MV LL AGNL+EA FI +P V GA
Sbjct: 558 GMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGA 617
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
L C ++ N D E+ ++ E P + Y V++SN YA DGRW V ++R+ I GL
Sbjct: 618 FLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGL 677
Query: 541 RKEAGVSWVSGSSN 554
K GVS V N
Sbjct: 678 NKVPGVSLVEMDVN 691
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 205/423 (48%), Gaps = 21/423 (4%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
+ LS+ + + K LHA + + D T L+ LYA L AR LF + P +
Sbjct: 44 IHLSRICKHPTTVKTLHASLIISGHPPD----TTLISLYASFGFLRHARTLFHRLPSPTH 99
Query: 70 FLWNSIIRAYALAHRFNDAKSL---FKNLLRTQLKP--DNFTYACITRACSENSDLPGLR 124
+ IIR H ND S F NL RT L D ++ + + S+ D+
Sbjct: 100 HSFKLIIR----WHFLNDVHSHVVSFYNLARTTLGSFNDLVVFSILLKTASQLRDIVLTT 155
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H + S DS ++LV AYSK + +A KVFD + D +V SMI +
Sbjct: 156 KLHCNILKSN-AADSFVLTSLVDAYSKCGKLRDARKVFDEIPDRSVVSWTSMIVAYVQNE 214
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++ L LF+ M + +T+ L++ + L G+ +HG+ +K+ + Y+++
Sbjct: 215 CAEEGLMLFNRMREGFLDGNVFTVGSLVTACTKLGCLHQGKWVHGYVIKNGIEINSYLAT 274
Query: 245 VLVSMYARCNCMNSAYHVFNSLF------HPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
L++MY +C + A VF+ DLV W+A+I GY+Q+G AL F
Sbjct: 275 SLLNMYVKCGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKK 334
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+ V +AS+L+A A+ N+ G ++H V+++G + + ++LVDMY+KCG +
Sbjct: 335 WYRILPNSVTLASLLSACAQLENIVMGKLLHVLVVKYGLD-DTSLRNSLVDMYAKCGLIP 393
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
VF T +++++++NSVI G G Y+A + F + + PD T +L AC
Sbjct: 394 DAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACA 453
Query: 419 HGG 421
G
Sbjct: 454 SVG 456
>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
[Vitis vinifera]
Length = 1580
Score = 289 bits (739), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/546 (32%), Positives = 284/546 (52%), Gaps = 5/546 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
+VL L K++H + K+ L D A LV +Y+ AR +F+
Sbjct: 908 LVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKH 967
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL--- 123
+ WNS+I + A + ++ +LF +LL LKPD+FT A + RACS S + GL
Sbjct: 968 LDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACS--SLIDGLNIS 1025
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R +H A+ +G DS ++ L+ YSK ++EA +F D DL N+M+ G+
Sbjct: 1026 RQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIG 1085
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
K+L+LF + + G+ D+ TL LL G+ IH +K+ FDS +V+
Sbjct: 1086 NDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVN 1145
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
S ++ MY +C M +A VFN + PD V W+++I+G G+ +AL + ++
Sbjct: 1146 SGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVM 1205
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D A+++ A++ + G +H VI+ V ++LVDMY+KCG + ++
Sbjct: 1206 PDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRL 1265
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ M+ RNI +N++++GL HG +A F+ + G+ PD +F +L AC H GL
Sbjct: 1266 FKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLT 1325
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
++ E M +YGI+ + EHY +V LG AG ++EA I ++P +++ ALL
Sbjct: 1326 SEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLG 1385
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I G+ + + VA +LF +P A V+LSN YA RWDDV R + ++K+
Sbjct: 1386 ACRIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKD 1445
Query: 544 AGVSWV 549
G SW+
Sbjct: 1446 PGFSWI 1451
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 134/482 (27%), Positives = 227/482 (47%), Gaps = 37/482 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S +L K HA + + D F + L+ +Y+ L SAR +FD TP+R
Sbjct: 627 LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERD 686
Query: 69 VFLWNSIIRAYALAHRFNDAKS-----LFKNLLRTQL-KPDNFTYACITRACSENSDLPG 122
+ WN+I+ AYA + ND + LF+ LLR L T A + + C + L
Sbjct: 687 LVTWNAILGAYAASVDSNDGNAQEGLHLFR-LLRASLGSTTRMTLAPVLKLCLNSGCLWA 745
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VHG AI GL D S ALV YSK + +A +FD + + D+VL N M+ G+
Sbjct: 746 AEGVHGYAIKIGLEWDVFVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQ 805
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++ QLF R G PDE+++ +++G+ E ++D ++
Sbjct: 806 LGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSE----------------VNWDEGKWL 849
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ + + A+ + + +PD+ W+ ++ GD A+ F +N
Sbjct: 850 ADQVQAYAAKLSLSDD---------NPDVFCWNKKLSECLWAGDNWGAIECFVNMNGLNI 900
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D V + VLAA A + ++ G +HG ++ G + V V+++LV+MYSK G +
Sbjct: 901 DYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKMGCAYFARE 960
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH--G 420
VF M ++I++NS+I ++ F D++ +GL PD T +++L AC
Sbjct: 961 VFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLID 1020
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GL N R+I + I A + ++ + +G +EEA F++ +D A A
Sbjct: 1021 GL-NISRQIHVHALKTGNI-ADSFVATTLIDVYSKSGKMEEA-EFLFQNKDDLDLACWNA 1077
Query: 481 LL 482
++
Sbjct: 1078 MM 1079
>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25060, mitochondrial-like [Vitis vinifera]
Length = 678
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/524 (32%), Positives = 276/524 (52%), Gaps = 1/524 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HAL+ + KL++ YA + SAR +FDK+PQ V WN++I AY+
Sbjct: 25 KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A SL+ + ++PD+ TY + +AC+ + DL A+ G G D +
Sbjct: 85 AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A++ Y+K +DEA++VFD + DLV +MI+G A G +++ ++ M +
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D ++GLI +G IHG+ ++ V + LV MYA+ + A VF
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + ++++WSALI+G++Q G G AL + G K D V + SVL A ++ +
Sbjct: 265 RRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLK 324
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +HGY+++ + S+A++DMYSKCG L VF+ +S R+ I++N++I G
Sbjct: 325 LGKSVHGYIVRR-LHFDCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWNAIIASYG 383
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+HG +A F + E + PD +TF++LL A H GLV GR F+ M EY IQ
Sbjct: 384 IHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSE 443
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
+HY MV LL AG +EEA I S+ A+ ALLS C +G + E+ A ++ E
Sbjct: 444 KHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLE 503
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+P ++SN +A RWD+V ++R + G++K G S
Sbjct: 504 LNPDDPGIYSLVSNFFATARRWDEVAEVRKIMKKTGMKKVPGYS 547
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 161/313 (51%)
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
+ D P + +H I++G+ +++ L+ +Y++L I+ A +VFD + N+M
Sbjct: 17 SKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAM 76
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
I ++ G ++L L+ M G PD T ++ L G+ + +
Sbjct: 77 IIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGY 136
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+V + ++++YA+C M+ A VF+ + DLV W+ +ITG +Q G +A+ +R+
Sbjct: 137 GDDVFVGAAVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQ 196
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
++ + + D V++ ++ A + G IHGY+I+ + V+V ++LVDMY+K G+
Sbjct: 197 MHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGH 256
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
L L VF M +N+I+++++I G +GF A + D+ G PD + ++L A
Sbjct: 257 LELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSVLLA 316
Query: 417 CCHGGLVNDGREI 429
C G + G+ +
Sbjct: 317 CSQVGFLKLGKSV 329
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
A IH +I G ++ L+ Y++ G++ QVF+ + + +N++I+
Sbjct: 24 AKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRR 83
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE-YG 438
G ++A + + +G+ PD ST++ +L AC + G E + + ++ YG
Sbjct: 84 GAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYG 137
>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 274/531 (51%), Gaps = 36/531 (6%)
Query: 55 PSARILFDKTP------QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYA 108
P+A L KTP RS W +R+ ++ F +A S + + + +PDNF +
Sbjct: 37 PTASPLTSKTPPKPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFP 96
Query: 109 CITRACSENSDLPGLRFVHGGAI---------------------VSGLGRDSITSSALVT 147
+ +A S DL +H A+ G+G + T++AL+
Sbjct: 97 AVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMA 156
Query: 148 AYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT 207
Y+KL +D++ +F+ D D+V N+MIS F+ + ++L F M+ G D T
Sbjct: 157 MYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVT 216
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSS-FDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
+ ++ L VG+ IH + L+++ +V S LV MY C + S VF+ +
Sbjct: 217 IASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHI 276
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYF-RKLNMQGKKADPVLIASVLAAAAKS-ANVWP 324
+ W+A+I+GY++ G KAL F + + G + +ASV+ A S A +
Sbjct: 277 LGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAK 336
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH Y I++ + V SALVDMY+KCG L L +VF M +N+IT+N +I+ G+
Sbjct: 337 GKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGM 396
Query: 385 HGFTYQAFEFFRDIIEKG-----LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
HG +A E F++++ + P+E TF + AC H GL+++G +F RM ++G+
Sbjct: 397 HGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGV 456
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYGNSDLAEIVA 498
+ ++HY +V LLG AG LEEAY + ++P D + +LL C I+ N +L E+ A
Sbjct: 457 EPTSDHYACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAA 516
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L +P ++ V+LSN Y+ G W+ M++R ++ G++KE G SW+
Sbjct: 517 KNLLHLEPNVASHYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWI 567
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 169/339 (49%), Gaps = 11/339 (3%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
F L+ +YA + ++ LF+ R + WN++I +++ + RF++A + F+ ++
Sbjct: 149 FTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLE 208
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSITSSALVTAYSKLSLIDE 157
++ D T A + ACS L + +H + + L +S SALV Y ++
Sbjct: 209 GVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVES 268
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GKTPDEYTLVGLISGLW 216
+VFD + + L N+MISG+A G +K+L LF M+++ G P+ T+ ++
Sbjct: 269 GRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPACV 328
Query: 217 EPSLLSVGQG--IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
SL ++ +G IH + +++ S V S LV MYA+C C+N + VFN + + +++TW
Sbjct: 329 H-SLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITW 387
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQ---GKKADP--VLIASVLAAAAKSANVWPG-AVI 328
+ LI G +AL F+ + + G +A P V +V AA + S + G +
Sbjct: 388 NVLIMACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLF 447
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ HG E + + +VD+ + G L ++ TM
Sbjct: 448 YRMKHDHGVEPTSDHYACVVDLLGRAGQLEEAYELVNTM 486
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++++ KE+HA + L D + LV +YA L +R +F++ P ++V WN +I
Sbjct: 333 AIAKGKEIHAYAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIM 392
Query: 78 AYALAHRFNDAKSLFKNLLRT-----QLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
A + + +A LFKN++ + KP+ T+ + ACS H G I
Sbjct: 393 ACGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAACS-----------HSGLIS 441
Query: 133 SGL 135
GL
Sbjct: 442 EGL 444
>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
Length = 803
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 288/548 (52%), Gaps = 15/548 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L K++HA + L + F LV +Y L S+++L R + WN+++
Sbjct: 129 EGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 187
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-L 135
+ + +A + ++ ++PD FT + + ACS L + +H A+ +G L
Sbjct: 188 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 247
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+S SALV Y + +VFDG+ D + L N+MI+G++ ++L LF
Sbjct: 248 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 307
Query: 196 MLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G + T+ G++ S + IHGF +K D +V + L+ MY+R
Sbjct: 308 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 367
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGK----------K 303
++ A +F + DLVTW+ +ITGY + AL K+ N++ K K
Sbjct: 368 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 427
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ + + ++L + A + + G IH Y I++ V V SALVDMY+KCG L + +V
Sbjct: 428 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 487
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ + ++N+IT+N +I+ G+HG +A + R ++ +G+ P+E TF ++ AC H G+V
Sbjct: 488 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 547
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALL 482
++G IF M +YG++ ++HY +V LLG AG ++EAY + +P+ + A + +LL
Sbjct: 548 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 607
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
I+ N ++ EI A L + +P ++ V+L+N Y+ G WD ++R ++ + G+RK
Sbjct: 608 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 667
Query: 543 EAGVSWVS 550
E G SW+
Sbjct: 668 EPGCSWIE 675
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 195/430 (45%), Gaps = 18/430 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
Q + K++HA V K D A LV LY + +FD+ +R+ WNS+
Sbjct: 24 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 83
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL---RFVHGGAIV 132
I + ++ A F+ +L ++P +FT + ACS GL + VH +
Sbjct: 84 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 143
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G +S + LV Y KL + + + DLV N+++S ++L+
Sbjct: 144 KG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 202
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-SFDSYDYVSSVLVSMYA 251
M+ G PDE+T+ ++ +L G+ +H + LK+ S D +V S LV MY
Sbjct: 203 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 262
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIA 310
C + S VF+ +F + W+A+I GYSQ +AL F + G A+ +A
Sbjct: 263 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 322
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
V+ A +S IHG+V++ G + V + L+DMYS+ G + + +++F M +R
Sbjct: 323 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 382
Query: 371 NIITYNSVILG-----------LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+++T+N++I G L LH + + L P+ T +L +C
Sbjct: 383 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 442
Query: 420 GGLVNDGREI 429
+ G+EI
Sbjct: 443 LSALAKGKEI 452
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 167/328 (50%), Gaps = 7/328 (2%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT-SSALVTAYSKLSLIDEA 158
+KPDN+ + + +A ++ D+ + +H G G DS+T ++ LV Y K
Sbjct: 6 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 65
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGL 215
KVFD +S+ + V NS+IS W+ +L+ F ML P +TLV ++ S L
Sbjct: 66 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 125
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
P L +G+ +H + L+ + ++ + LV+MY + + S+ + S DLVTW+
Sbjct: 126 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 184
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+++ Q +AL Y R++ ++G + D I+SVL A + + G +H Y +++
Sbjct: 185 TVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKN 244
Query: 336 G-FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G + + V SALVDMY C + G +VF+ M +R I +N++I G + +A
Sbjct: 245 GSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLL 304
Query: 395 FRDIIEK-GLNPDESTFSALLCACCHGG 421
F + E GL + +T + ++ AC G
Sbjct: 305 FIGMEESAGLLANSTTMAGVVPACVRSG 332
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 122/239 (51%), Gaps = 7/239 (2%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF--DSYDYVSSVLVSMYARC 253
M+ LG PD Y L+ + + + +G+ IH K + DS V++ LV++Y +C
Sbjct: 1 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVT-VANTLVNLYRKC 59
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ Y VF+ + + V+W++LI+ + AL FR + + + + SV+
Sbjct: 60 GDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 119
Query: 314 AAAAK---SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
A + + G +H Y ++ G EL+ + + LV MY K G L + + R
Sbjct: 120 TACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGR 178
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++T+N+V+ L + +A E+ R+++ +G+ PDE T S++L AC H ++ G+E+
Sbjct: 179 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 237
>gi|297742828|emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 279/544 (51%), Gaps = 3/544 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ + + +E+H V K D F L+ Y L A +FD+ P++
Sbjct: 46 FVLKACADAFEVRKGREVHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEK 105
Query: 68 SVFLWNSIIRAYAL-AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+ WN++I +++ + DA +F+ ++ LKP++ T + E R V
Sbjct: 106 DLVSWNTMIGVFSVNGWHYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREV 165
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG +I GL D +++L+ Y+K EA VF + ++V N+MI+ FA F
Sbjct: 166 HGSSIRMGLESDIFIANSLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFE 225
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ L M G+ P+ T ++ L+ G+ IH + +VS+ L
Sbjct: 226 LVAVGLVRQMQDYGELPNSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNAL 285
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
MYA+ + A +VF++ D V+++ LI G+SQ D ++L F ++ + G K D
Sbjct: 286 TDMYAKSGHLKLARNVFDTSLR-DEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDN 344
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V L+A A + G IHG++++ F + + V+++L+D Y+KCG +GL +F+
Sbjct: 345 VSFMGALSACANLTAIKQGKEIHGFLLRKLFHIHLFVANSLLDFYTKCGRIGLARNIFDR 404
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M+ +++ ++N++ILG G+ G A + F ++ + + D +F A+L AC HGGL+ G
Sbjct: 405 MTNKDVASWNTMILGYGMLGELDTAIDLFENMRKDDVEYDSVSFIAVLSACSHGGLLEKG 464
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
R+ F + GI+ HY MV LLG AG +EEA I LP D + GALL C
Sbjct: 465 RKYFDELKAR-GIEPTQMHYACMVDLLGRAGLMEEAAELIKGLPIVPDANIWGALLGACR 523
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
IYGN +LA A LFE P Y +LSN YAE GRWD+ ++R+ + G++K G
Sbjct: 524 IYGNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGC 583
Query: 547 SWVS 550
SWV
Sbjct: 584 SWVQ 587
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 188/365 (51%), Gaps = 3/365 (0%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ + FLWN++IR Y++A ++ ++R ++PD+ T+ + +AC++ ++ R
Sbjct: 4 RTTAFLWNTLIRGYSIAG-VGGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGRE 62
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG + G D + L++ Y + +A +VFD + + DLV N+MI F+ G+
Sbjct: 63 VHGSVVKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGW 122
Query: 186 -WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+ +L +F M+ G P+ T+ + L E G+ +HG ++ +S ++++
Sbjct: 123 HYRDALDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIAN 182
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+ MYA+ A +VF L ++V+W+A+I ++Q A+ R++ G+
Sbjct: 183 SLIDMYAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELP 242
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ V +VL A A+ V PG IH I G + VS+AL DMY+K G+L L VF
Sbjct: 243 NSVTFTNVLPACARMGLVRPGKEIHARSIHMGCAFDLFVSNALTDMYAKSGHLKLARNVF 302
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+T S R+ ++YN +I+G ++ F ++ GL D +F L AC + +
Sbjct: 303 DT-SLRDEVSYNILIVGHSQTSDCSESLSLFSEMQLMGLKQDNVSFMGALSACANLTAIK 361
Query: 425 DGREI 429
G+EI
Sbjct: 362 QGKEI 366
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 138/262 (52%), Gaps = 2/262 (0%)
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
L N++I G++ G L++++ M+R+G PD++T ++ + + G+ +HG
Sbjct: 9 LWNTLIRGYSIAGV-GGGLEVYNQMVRIGVRPDDHTFPFVLKACADAFEVRKGREVHGSV 67
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG-DYGKA 290
+K F+S +V + L+S Y C + A VF+ + DLV+W+ +I +S G Y A
Sbjct: 68 VKLGFESDVFVGNTLLSFYGNCGGLRDAGRVFDEMPEKDLVSWNTMIGVFSVNGWHYRDA 127
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L FR + +G K + + I+S L + G +HG I+ G E + ++++L+DM
Sbjct: 128 LDMFRLMIDEGLKPNSITISSFLPVLVELEFFKAGREVHGSSIRMGLESDIFIANSLIDM 187
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
Y+K G+ VF + +N++++N++I + F A R + + G P+ TF
Sbjct: 188 YAKSGHSTEASNVFYKLDAKNVVSWNAMIANFAQNRFELVAVGLVRQMQDYGELPNSVTF 247
Query: 411 SALLCACCHGGLVNDGREIFTR 432
+ +L AC GLV G+EI R
Sbjct: 248 TNVLPACARMGLVRPGKEIHAR 269
>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 760
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/600 (29%), Positives = 288/600 (48%), Gaps = 70/600 (11%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+T + HA + K+ D + + KL+ Y+ N A ++ P +++ ++S+I A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A F + +F + L PD+ + + C+E S + +H + VSGL D+
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC--------------------------- 173
++ Y + + +A KVFD +SD D+V C
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 174 --------NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
N ++SGF G+ +++ +F + LG PD+ T+ ++ + + +L++G+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYAR---------------------CNC--------- 255
IHG+ +K V S ++ MY + CN
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 256 -MNSAYHVFN----SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
++ A +F ++V+W+++I G +Q G +AL FR++ + G K + V I
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A A + G HG+ ++ +V V SAL+DMY+KCG + L VF M +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
N++ +NS++ G +HG + F ++ L PD +F++LL AC GL ++G + F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M+EEYGI+ + EHY MV LLG AG L+EAY I +P D V GALL+ C + N
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
DLAEI A +LF +P V+LSN YA G W +V +R+ + GL+K G SW+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 55/99 (55%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + H + LL + + L+ +YA + ++I+F+ P +++ WNS++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
+++ + + S+F++L+RT+LKPD ++ + AC +
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 695
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 288/547 (52%), Gaps = 9/547 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS----ARILFDK 63
L+L+ K+ + L +++HA + K L DP ++ AL +LP A +F+
Sbjct: 26 LILQQCKTPKDL---QQVHAHLLKTRRLLDPIITEAVLESAAL--LLPDTIDYALSIFNH 80
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+ +N +IR A ++A LFK + ++ D FT++ + +ACS L
Sbjct: 81 IDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREG 140
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
VH + SG + + L+ Y+ I A VFDG+ + +V NSM+SG+
Sbjct: 141 EQVHALILKSGFKSNEFVENTLIQMYANCGQIGVARHVFDGMPERSIVAWNSMLSGYTKN 200
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G WD+ ++LF +L L D+ T++ ++ + L +G+ I + + + ++
Sbjct: 201 GLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGEYIVSKGLRRNNTLT 260
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+ MYA+C +++A +F+ + D+V WSA+I+GY+Q +AL F ++
Sbjct: 261 TSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVY 320
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ V + SVL + A G +H Y+ + +L+V + + L+D Y+KCGY+ ++V
Sbjct: 321 PNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLIDFYAKCGYIDRSVEV 380
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ MS +N+ T+ ++I GL +G A EFF ++E + P++ TF +L AC H LV
Sbjct: 381 FKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLV 440
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+ GR +F M ++ I+ + EHY MV +LG AG LEEAY FI ++P P + V LL+
Sbjct: 441 DQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLA 500
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C + N ++AE + +P ++LSNTYA GR +D +++R I + ++K
Sbjct: 501 SCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEIKKI 560
Query: 544 AGVSWVS 550
G S +
Sbjct: 561 PGCSLIE 567
>gi|225435444|ref|XP_002282803.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Vitis vinifera]
Length = 854
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 281/535 (52%), Gaps = 4/535 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL K++H L K + D + L+ +Y+ N L S+ LF+ P R LWNS+I
Sbjct: 270 SLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMIS 329
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLG 136
AYA +A LF + +K D T + C E S L + +H I SG+
Sbjct: 330 AYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMR 389
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ +AL++ Y++L+ ++ K+FD + D++ N+MI A ++ +LF+ M
Sbjct: 390 IDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM 449
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
P+ YT++ +++ + + L G+ IHG+ +K S + + + L MY C
Sbjct: 450 RESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 509
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+A +F DL++W+A+I Y + KAL F ++ + + + V I +VL++
Sbjct: 510 ATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALLLFHRM-ISEAEPNSVTIINVLSSF 568
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + G +H YV + GF L + +S +A + MY++CG L +F+T+ +RNII+
Sbjct: 569 THLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNIIS 628
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N++I G G++G A F ++E G P+ TF ++L AC H G + G ++F M
Sbjct: 629 WNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHSMV 688
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+++ + + HY +V LL G ++EA FI S+P D +V ALLS C Y ++ A
Sbjct: 689 QDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAKQA 748
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ + +L + +P V+LSN YA G W +V ++R + + GLRK G+SW+
Sbjct: 749 KTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 803
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 213/424 (50%), Gaps = 3/424 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
LVL+ + ++ R K +H + L+ D T +V Y + AR +FD R
Sbjct: 58 LVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR 117
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V LWN+++ Y + +A L + + R L+P++ T + AC S+L R VH
Sbjct: 118 DVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVH 177
Query: 128 GGAIVSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
G + +G+ + ++AL+ Y + + + +FD + ++V N+MISG+ G +
Sbjct: 178 GYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAMISGYYDVGDY 236
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
K+L+LF ML D T++ + E L +G+ IH +K F Y+ + L
Sbjct: 237 FKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNAL 296
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MY+ + S++ +F S+ + D W+++I+ Y+ G + +A+ F ++ +G K D
Sbjct: 297 LNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDE 356
Query: 307 VLIASVLAAAAKSAN-VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ +L+ + A+ + G +H +VI+ G + + +AL+ MY++ + ++F+
Sbjct: 357 RTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD 416
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M +II++N++IL L + QA E F + E + P+ T ++L AC ++
Sbjct: 417 RMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDF 476
Query: 426 GREI 429
GR I
Sbjct: 477 GRSI 480
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 2/347 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WNS+I+ A S + + + P+N T + +AC+ + + + +H
Sbjct: 21 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 80
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+ L D +A+V Y K +++A VFD +SD D+VL N+M+ G+ G +++++
Sbjct: 81 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 140
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS-FDSYDYVSSVLVSMY 250
L M R P+ T+V L+ S L +G+G+HG+CL++ FDS +V++ L+ Y
Sbjct: 141 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 200
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
R + M +F+ + ++V+W+A+I+GY GDY KAL F ++ + K D V +
Sbjct: 201 LRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 259
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+ A A+ ++ G IH I+ F + + +AL++MYS G L Q+FE++ R
Sbjct: 260 VAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 319
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ +NS+I G +A + F + +G+ DE T +L C
Sbjct: 320 DAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 366
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 207/439 (47%), Gaps = 8/439 (1%)
Query: 37 DPFYATKLVRLYALNN--VLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+P AT L+ Y + VLP +LFD R++ WN++I Y + A LF
Sbjct: 189 NPHVATALIGFYLRFDMRVLP---LLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQ 245
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+L ++K D T +AC+E L + +H AI D +AL+ YS
Sbjct: 246 MLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGS 305
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
++ + ++F+ V + D L NSMIS +A G ++++ LF M G DE T+V ++S
Sbjct: 306 LESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSM 365
Query: 215 LWE-PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
E S L G+ +H +KS + + L+SMY NC+ S +F+ + D+++
Sbjct: 366 CEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIIS 425
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+ +I ++ +A F ++ K + I S+LAA + G IHGYV+
Sbjct: 426 WNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM 485
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+H E++ + +AL DMY CG +FE +R++I++N++I + ++A
Sbjct: 486 KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMIASYVKNNQAHKALL 545
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE-YGIQAKTEHYIYMVKL 452
F +I + P+ T +L + H + G+ + +T + + + +
Sbjct: 546 LFHRMISEA-EPNSVTIINVLSSFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITM 604
Query: 453 LGLAGNLEEAYSFIWSLPK 471
G+L+ A + +LPK
Sbjct: 605 YARCGSLQSAENIFKTLPK 623
>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
Length = 890
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 288/547 (52%), Gaps = 15/547 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L K++HA + L + F LV +Y L S+++L R + WN+++
Sbjct: 216 EGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-L 135
+ + +A + ++ ++PD FT + + ACS L + +H A+ +G L
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+S SALV Y + +VFDG+ D + L N+MI+G++ ++L LF
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 196 MLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G + T+ G++ S + IHGF +K D +V + L+ MY+R
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGK----------K 303
++ A +F + DLVTW+ +ITGY + AL K+ N++ K K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ + + ++L + A + + G IH Y I++ V V SALVDMY+KCG L + +V
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ + ++N+IT+N +I+ G+HG +A + R ++ +G+ P+E TF ++ AC H G+V
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALL 482
++G IF M +YG++ ++HY +V LLG AG ++EAY + +P+ + A + +LL
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
I+ N ++ EI A L + +P ++ V+L+N Y+ G WD ++R ++ + G+RK
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 543 EAGVSWV 549
E G SW+
Sbjct: 755 EPGCSWI 761
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 195/430 (45%), Gaps = 18/430 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
Q + K++HA V K D A LV LY + +FD+ +R+ WNS+
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 170
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL---RFVHGGAIV 132
I + ++ A F+ +L ++P +FT + ACS GL + VH +
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G +S + LV Y KL + + + DLV N+++S ++L+
Sbjct: 231 KG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-SFDSYDYVSSVLVSMYA 251
M+ G PDE+T+ ++ +L G+ +H + LK+ S D +V S LV MY
Sbjct: 290 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIA 310
C + S VF+ +F + W+A+I GYSQ +AL F + G A+ +A
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
V+ A +S IHG+V++ G + V + L+DMYS+ G + + +++F M +R
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 371 NIITYNSVILG-----------LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+++T+N++I G L LH + + L P+ T +L +C
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 420 GGLVNDGREI 429
+ G+EI
Sbjct: 530 LSALAKGKEI 539
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 187/373 (50%), Gaps = 11/373 (2%)
Query: 55 PSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
PS I ++P+ W ++R+ ++ +A + +++ +KPDN+ + + +A
Sbjct: 52 PSIFISQSRSPE----WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAV 107
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSIT-SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
++ D+ + +H G G DS+T ++ LV Y K KVFD +S+ + V
Sbjct: 108 ADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSW 167
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQGIHGF 230
NS+IS W+ +L+ F ML P +TLV ++ S L P L +G+ +H +
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
L+ + ++ + LV+MY + + S+ + S DLVTW+ +++ Q +A
Sbjct: 228 GLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVD 349
L Y R++ ++G + D I+SVL A + + G +H Y +++G + + V SALVD
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 346
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK-GLNPDES 408
MY C + G +VF+ M +R I +N++I G + +A F + E GL + +
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406
Query: 409 TFSALLCACCHGG 421
T + ++ AC G
Sbjct: 407 TMAGVVPACVRSG 419
>gi|8778977|gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
from Arabidopsis thaliana BAC F28A21 gi|T04867 and
contains multiple PPR PF|01535 repeats. EST gb|AI999742
comes from this gene. This gene may be cut off, partial
[Arabidopsis thaliana]
Length = 757
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 175/600 (29%), Positives = 288/600 (48%), Gaps = 70/600 (11%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+T + HA + K+ D + + KL+ Y+ N A ++ P +++ ++S+I A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A F + +F + L PD+ + + C+E S + +H + VSGL D+
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAF 152
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC--------------------------- 173
++ Y + + +A KVFD +SD D+V C
Sbjct: 153 VQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSG 212
Query: 174 --------NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
N ++SGF G+ +++ +F + LG PD+ T+ ++ + + +L++G+
Sbjct: 213 IEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGR 272
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYAR---------------------CNC--------- 255
IHG+ +K V S ++ MY + CN
Sbjct: 273 LIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNG 332
Query: 256 -MNSAYHVFN----SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
++ A +F ++V+W+++I G +Q G +AL FR++ + G K + V I
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A A + G HG+ ++ +V V SAL+DMY+KCG + L VF M +
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTK 452
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
N++ +NS++ G +HG + F ++ L PD +F++LL AC GL ++G + F
Sbjct: 453 NLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYF 512
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M+EEYGI+ + EHY MV LLG AG L+EAY I +P D V GALL+ C + N
Sbjct: 513 KMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNN 572
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
DLAEI A +LF +P V+LSN YA G W +V +R+ + GL+K G SW+
Sbjct: 573 VDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 55/99 (55%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + H + LL + + L+ +YA + ++I+F+ P +++ WNS++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMN 462
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
+++ + + S+F++L+RT+LKPD ++ + AC +
Sbjct: 463 GFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950 [Vitis vinifera]
Length = 1291
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 281/535 (52%), Gaps = 3/535 (0%)
Query: 19 LSRTKELHALVAKASLL-RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L K +H K + D F + LV LY+ + A +F++ + LW S++
Sbjct: 119 LELGKVIHGFAKKNDEIGSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVT 178
Query: 78 AYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y + +A +LF ++ + D T + AC++ ++ VHG I
Sbjct: 179 GYQQNNDPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFD 238
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D ++L+ Y+K A +F + + D++ ++MI+ +A+ +++L LF M
Sbjct: 239 GDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEM 298
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ P+ T+V + L G+ IH + F+ VS+ L+ MY +C+C
Sbjct: 299 IEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCP 358
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ A +F L D+V+W AL++GY+Q G K++ FR + G + D V + +LAA+
Sbjct: 359 DEAVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAAS 418
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
++ +HGYV++ GF +V V ++L+++YSKCG LG +++F+ M R+++ ++
Sbjct: 419 SELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWS 478
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
S+I G+HG +A E F +++ + P+ TF ++L AC H GLV +G +IF RM
Sbjct: 479 SMIAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVH 538
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+Y ++ +EH+ MV LLG G L +A I +P P P V GALL C I+ N ++ E
Sbjct: 539 DYQLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGE 598
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A LF DP Y ++LSN YA DG+WD+V +LR I + GL+K G S V
Sbjct: 599 AAAKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVE 653
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 151/428 (35%), Positives = 228/428 (53%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
L+ H GL DS + Y + ID A VF+ + +P L N MI GFA
Sbjct: 736 LKKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFAT 795
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G + SL+L+ M+ G PD++ + S L G+ IH + + +V
Sbjct: 796 DGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFV 855
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV MYA+C + +A VF+ + DLV+W+++I+GY+ G + L +F + G
Sbjct: 856 DAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGV 915
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V I SVL A + G H YVIQ GFE ++V++A++DMYSKCG L L
Sbjct: 916 IPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARC 975
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ + ++++ ++++I G+HG +A + F +++ G+ P TF+ +L AC H GL
Sbjct: 976 LFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGL 1035
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
+ +G+ F MTEE+ I K +Y MV LLG AG L EA I ++P D ++ G+LL
Sbjct: 1036 LEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENMPVEPDASIWGSLL 1095
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C I+ N DLAE +A LF DP Y V+LSN YA RW++V K+R + G K
Sbjct: 1096 GACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNEVEKVRKMMARRGANK 1155
Query: 543 EAGVSWVS 550
G S V
Sbjct: 1156 IQGFSLVE 1163
Score = 219 bits (557), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 131/423 (30%), Positives = 220/423 (52%), Gaps = 26/423 (6%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH+ V K +L D F+ATKL LYA L +AR +FD+TP +V LWNS +R+Y
Sbjct: 22 QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81
Query: 84 RFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGAIVSG-------L 135
++ + LF ++ T + PDNFT +AC+ GLR + G ++ G +
Sbjct: 82 QWEETLRLFHLMICTAGEAPDNFTIPIALKACA------GLRMLELGKVIHGFAKKNDEI 135
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
G D SALV YSK + EA+KVF+ PD VL SM++G+ +++L LF
Sbjct: 136 GSDMFVGSALVELYSKCGQMGEALKVFEEFQRPDTVLWTSMVTGYQQNNDPEEALALFSQ 195
Query: 196 MLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M+ + D TLV ++S + + G +HG ++ FD + + L+++YA+
Sbjct: 196 MVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTG 255
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
C A ++F+ + D+++WS +I Y+ +AL F ++ + + + V + S L
Sbjct: 256 CEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQ 315
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A S N+ G IH + GFEL VS+AL+DMY KC + +F+ + ++++++
Sbjct: 316 ACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDEAVDLFQRLPKKDVVS 375
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA-----------CCHGGLV 423
+ +++ G +G Y++ FR+++ G+ PD +L A C HG +V
Sbjct: 376 WVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVV 435
Query: 424 NDG 426
G
Sbjct: 436 RSG 438
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 171/347 (49%), Gaps = 3/347 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+ HA + L D TK +Y N + +A I+F+ P FLWN +IR +A
Sbjct: 737 KKTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATD 796
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
RF + L+ ++ LKPD F + ++C+ SDL + +H + G D
Sbjct: 797 GRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRGKVIHQHLVCCGCSNDLFVD 856
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y+K I+ A VFD ++ DLV SMISG+AH G+ ++L FD M G
Sbjct: 857 AALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISGYAHNGYNSETLGFFDLMRSSGVI 916
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ +++ ++ L G+ H + +++ F+ V++ ++ MY++C ++ A +
Sbjct: 917 PNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCL 976
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ DLV WSA+I Y G KA+ F ++ G + V VL+A + S +
Sbjct: 977 FDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLL 1036
Query: 323 WPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETM 367
G ++ ++ F ++ +S + +VD+ + G L + + E M
Sbjct: 1037 EEGK-MYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIENM 1082
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L R K +H + D F LV +YA + +AR++FDK R + W S+I
Sbjct: 834 LQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMISG 893
Query: 79 YALAHRFNDAKSL-FKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y AH ++++L F +L+R+ + P+ + + AC L + H I +G
Sbjct: 894 Y--AHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFE 951
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D + ++A++ YSK +D A +FD + DLV ++MI+ + G K++ LFD M
Sbjct: 952 FDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQM 1011
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQ-----GIHGFCLKSSFDSYDYVSSVLVSMYA 251
++ G P T ++S LL G+ F + +Y + +V +
Sbjct: 1012 VKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNY----ACMVDLLG 1067
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALI 278
R ++ A + ++ PD W +L+
Sbjct: 1068 RAGQLSEAVDLIENMPVEPDASIWGSLL 1095
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + + H+ V + D AT ++ +Y+ L AR LFD+T + + W+++I
Sbjct: 934 ALRKGEWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIA 993
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+Y + A LF +++ ++P + T+ C+ ACS +
Sbjct: 994 SYGIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHS 1033
>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
Length = 771
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/527 (29%), Positives = 283/527 (53%), Gaps = 2/527 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H V K L RD F L+ +Y + AR++FDK +R V W+++IR+ +
Sbjct: 114 KEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKMMERDVVSWSTMIRSLSRN 173
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS--I 140
F+ A L + + Q++P + ++ +++ + +H I +
Sbjct: 174 KEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVP 233
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
T++AL+ Y+K + A ++F+G++ +V +MI+G ++ +LF M
Sbjct: 234 TTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEEN 293
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+E T++ LI L +G+ +H + L++ F +++ LV MY +C+ + +A
Sbjct: 294 IFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNAR 353
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F+S + D++ W+A+++ Y+Q +A F ++ G + V I S+L+ A +
Sbjct: 354 ALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAG 413
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G +H Y+ + E+ ++++ALVDMY+KCG + ++F R+I +N++I
Sbjct: 414 ALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIIT 473
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +HG+ +A + F ++ +G+ P++ TF LL AC H GLV +G+++F +M +G+
Sbjct: 474 GFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLV 533
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+ EHY MV LLG AG L+EA+ I S+P + V GAL++ C ++ N L E+ A Q
Sbjct: 534 PQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQ 593
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
L E +P Y V++SN YA RW D +R + G++KE G S
Sbjct: 594 LLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHS 640
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 170/335 (50%), Gaps = 2/335 (0%)
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
NF + +AC + S + +HG + GL RD +AL+ Y + + ++ A VFD
Sbjct: 94 NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ + D+V ++MI + +D +L+L M + P E +V +++ + + + +
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213
Query: 224 GQGIHGFCLKSSFDSYDYV--SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
G+ +H + +++S + + V ++ L+ MYA+C + A +FN L +V+W+A+I G
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
+ + F ++ + + + + S++ + + G +H Y++++GF +S+
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+++ALVDMY KC + +F++ R+++ + +++ QAF F +
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTS 393
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
G+ P + T +LL C G ++ G+ + + + +E
Sbjct: 394 GVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKE 428
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 131/267 (49%), Gaps = 10/267 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K+LHA + + AT LV +Y + + +AR LFD T R V +W +++
Sbjct: 313 ALQLGKQLHAYILRNGFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLS 372
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AYA A+ + A +LF + + ++P T + C+ L ++VH +
Sbjct: 373 AYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEV 432
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D I ++ALV Y+K I+ A ++F D+ + N++I+GFA G+ +++L +F M
Sbjct: 433 DCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEME 492
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYAR 252
R G P++ T +GL+ L++ G+ +H F L + Y +V + R
Sbjct: 493 RQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHY----GCMVDLLGR 548
Query: 253 CNCMNSAYHVFNSL-FHPDLVTWSALI 278
++ A+ + S+ P+ + W AL+
Sbjct: 549 AGLLDEAHEMIKSMPIKPNTIVWGALV 575
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L +L K +H+ + K + D T LV +YA + +A LF + R
Sbjct: 405 LLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRD 464
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ +WN+II +A+ +A +F + R +KP++ T+ + ACS
Sbjct: 465 ICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACS 511
>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 283/549 (51%), Gaps = 11/549 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L++ S+ +HA + F +T L+ +YA + + +F+ + +
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN 236
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I + + DA LF ++ + PD T+ + +A D+ + V G
Sbjct: 237 VVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSG 296
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC------NSMISGFAH 182
A+ G+ +++ +AL+ SK + EA +F+ + C N+MISG+
Sbjct: 297 YALELGVDSNTLVGTALIDMNSKCGSLQEARSIFN----SHFITCRFNAPWNAMISGYLR 352
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDY 241
GF +K+L+LF M + D YT + + + LS+G+ +H +KS + +Y
Sbjct: 353 SGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVS 412
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+S+ + + YA+C + VFN + DL++W++L+T YSQ ++ KA+ F + +G
Sbjct: 413 ISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEG 472
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ +SVL + A + G +HG + + G ++ + SALVDMY+KCG LG
Sbjct: 473 IAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAK 532
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF +S + +++ ++I G HG A + FR +++ G+ P+ TF +L AC HGG
Sbjct: 533 KVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGG 592
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV +G + F M + YG+ + EHY +V LL G+L +A FI +P + V L
Sbjct: 593 LVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTL 652
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L C ++GN +L E+ A ++ A V+LSNTY E G + D + LR + + G++
Sbjct: 653 LGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVK 712
Query: 542 KEAGVSWVS 550
KE G SW+S
Sbjct: 713 KEPGCSWIS 721
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 187/373 (50%), Gaps = 3/373 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
LFD+ QR+ F W +I A F D F + + PD F Y+ I + C
Sbjct: 127 LFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDS 186
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ VH ++ G + S+AL+ Y+KL I+++ KVF+ +++ ++V N+MI+G
Sbjct: 187 IELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
F + + LF M+ G TPD T +G+ + ++ + + G+ L+ DS
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT--WSALITGYSQQGDYGKALYYFRKL 297
V + L+ M ++C + A +FNS F W+A+I+GY + G KAL F K+
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGY 356
D SV A A + G +H I+ G E++ V +S+A+ + Y+KCG
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
L +VF M +R++I++ S++ +A E F ++ +G+ P++ TFS++L +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486
Query: 417 CCHGGLVNDGREI 429
C + L+ G+++
Sbjct: 487 CANLCLLEYGQQV 499
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 155/327 (47%), Gaps = 4/327 (1%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDS--ITSSALVTAYSKLSLIDEAIKVFDGVSD 167
+ R C + L + VHG + S + + + AYSK S ID A ++FD +S
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
+ +I+G A G + + F M G PD++ G++ + +G +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
H + F S+ +VS+ L++MYA+ + +Y VFN++ ++V+W+A+ITG++ Y
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
A F ++ +G D V A +V + GY ++ G + + +V +AL
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313
Query: 348 VDMYSKCGYLGLGIQVFET--MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
+DM SKCG L +F + ++ R +N++I G GF +A E F + + +
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373
Query: 406 DESTFSALLCACCHGGLVNDGREIFTR 432
D T+ ++ A ++ G+++ R
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHAR 400
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 140/286 (48%), Gaps = 13/286 (4%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS----MYARCNCMNSAYHVF 263
LV L+ + L + +HGF LKS F ++ S VL++ Y++C+ +++A +F
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHH--SLVLLNHVAHAYSKCSDIDAACRLF 128
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + + +W+ LI G ++ G + +F ++ QG D + +L ++
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H ++ GF VS+AL++MY+K + +VF TM+E N++++N++I G
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+ AF+ F ++ +G+ PD TF + A VN +E+ + E G+ + T
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV-SGYALELGVDSNT 307
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWS------LPKPVDPAVSGALLS 483
++ + G+L+EA S S P + +SG L S
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRS 353
>gi|449462814|ref|XP_004149135.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
gi|449523485|ref|XP_004168754.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 687
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 181/603 (30%), Positives = 292/603 (48%), Gaps = 69/603 (11%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S T +HA + K+ + F +L+ +Y + AR LFD+ +R++F WNSII
Sbjct: 33 RSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLFDRMLERNIFSWNSII 92
Query: 77 RAYALAHRFNDAKSLFKNLLRTQ-------------------------------LKPDNF 105
A+ + +DA +F+ + + + +
Sbjct: 93 CAFTKSGFLDDAVHIFEKMPQVDQCSWNSMISGFEQHGRFDEALVYFAQMHGHGFLVNEY 152
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
++ AC+ DL +H S D SALV YSK ++ A VFD +
Sbjct: 153 SFGSALSACAGLQDLKLGSQIHSLVYRSNYLSDVYMGSALVDMYSKCGRVEYAQSVFDEM 212
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ V NS+I+ + G D++L++F M++ G PDE TL ++S S + GQ
Sbjct: 213 TVRSRVSWNSLITCYEQNGPVDEALKIFVEMIKCGVEPDEVTLASVVSACATISAIKEGQ 272
Query: 226 GIHGFCLK-SSFDSYDYVSSVLVSMYARCNCMNS-------------------------- 258
IH +K F + + + L+ MYA+CN +N
Sbjct: 273 QIHARVVKCDEFRNDLILGNALLDMYAKCNRINEARIIFDMMPIRSVVSETSMVSGYAKA 332
Query: 259 -----AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
A ++F+++ D++TW+ALI G +Q G+ +AL FR L + ++L
Sbjct: 333 SKVKVARYMFSNMMVKDVITWNALIAGCTQNGENEEALILFRLLKRESVWPTHYTFGNLL 392
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELS------VMVSSALVDMYSKCGYLGLGIQVFETM 367
A A A++ G H +V++HGF V V ++L+DMY KCG + G +VF+ M
Sbjct: 393 NACANLADLQLGRQAHSHVLKHGFRFQYGEDSDVFVGNSLIDMYMKCGSVENGCRVFQHM 452
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E++ +++N++I+G +GF +A E F ++E G PD T +LCAC H GL+++GR
Sbjct: 453 LEKDCVSWNAMIVGYAQNGFGNKALEVFCKMLESGEAPDHVTMIGVLCACSHAGLLDEGR 512
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F MT ++G+ +HY MV LLG AG LEEA + I + D V G+LL+ C +
Sbjct: 513 YYFRSMTAQHGLMPLKDHYTCMVDLLGRAGYLEEAKNLIEEMSMQPDAIVWGSLLAACKV 572
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ N L E V +L E DP V+LSN YAE+ W +V+++R + G+ K+ G S
Sbjct: 573 HRNIQLGEYVVKKLLEVDPENSGPYVLLSNMYAENRDWKNVVRVRKLMRQRGVVKQPGCS 632
Query: 548 WVS 550
W+
Sbjct: 633 WIE 635
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + +L A+S + + +H +I+ F + + L+D+Y KCG + + ++F
Sbjct: 18 DSSPFSKLLNQCARSRSARDTSRVHACIIKSPFASETFIQNRLIDVYGKCGCVDVARKLF 77
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ M ERNI ++NS+I GF A F EK D+ ++++++ G +
Sbjct: 78 DRMLERNIFSWNSIICAFTKSGFLDDAVHIF----EKMPQVDQCSWNSMISGFEQHGRFD 133
Query: 425 DGREIFTRM 433
+ F +M
Sbjct: 134 EALVYFAQM 142
>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
Length = 1024
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 264/533 (49%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L R ++LHA K + L+ LYA + +A F +T +V LWN ++
Sbjct: 364 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 423
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY L ++ +F+ + ++ P+ +TY I + C DL +H I +
Sbjct: 424 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 483
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++ S L+ Y+KL +D A + + D+V +MI+G+ F DK+L F ML
Sbjct: 484 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 543
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G DE L +S L GQ IH S F S + LV++Y+RC +
Sbjct: 544 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 603
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+Y F D + W+AL++G+ Q G+ +AL F ++N +G + S + AA+
Sbjct: 604 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 663
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++AN+ G +H + + G++ V +AL+ MY+KCG + + F +S +N +++N+
Sbjct: 664 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 723
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I HGF +A + F +I + P+ T +L AC H GLV+ G F M EY
Sbjct: 724 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 783
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G+ K EHY+ +V +L AG L A FI +P D V LLS C ++ N ++ E
Sbjct: 784 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 843
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
AH L E +P A V+LSN YA +WD R + + G++KE G SW+
Sbjct: 844 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 896
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 213/423 (50%), Gaps = 1/423 (0%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K++ SL ++LH+ + K L + + KL Y L A +FD+ P+R++F WN
Sbjct: 56 KTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWN 115
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS-DLPGLRFVHGGAIV 132
+I+ A + + LF ++ + P+ T++ + AC S + +H +
Sbjct: 116 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY 175
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
GL ++ + L+ YS+ +D A +VFDG+ D +MISG + ++++L
Sbjct: 176 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 235
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F M LG P Y ++S + L +G+ +HG LK F S YV + LVS+Y
Sbjct: 236 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 295
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ SA H+F+++ D VT++ LI G SQ G KA+ F+++++ G + D +AS+
Sbjct: 296 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 355
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
+ A + ++ G +H Y + GF + + AL+++Y+KC + + F N+
Sbjct: 356 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 415
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+ +N +++ GL +F FR + + + P++ T+ ++L C G + G +I ++
Sbjct: 416 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 475
Query: 433 MTE 435
+ +
Sbjct: 476 IIK 478
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 210/454 (46%), Gaps = 1/454 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL K +SL ++LH LV K D + LV LY L SA +F QR
Sbjct: 254 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 313
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I + A LFK + L+PD+ T A + ACS + L + +H
Sbjct: 314 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 373
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G ++ AL+ Y+K + I+ A+ F ++VL N M+ +
Sbjct: 374 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 433
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S ++F M P++YT ++ L +G+ IH +K++F YV SVL+
Sbjct: 434 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 493
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ +++A+ + D+V+W+ +I GY+Q KAL FR++ +G ++D V
Sbjct: 494 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 553
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ + ++A A + G IH GF + +ALV +YS+CG + FE
Sbjct: 554 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 613
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ I +N+++ G G +A F + +G++ + TF + + A + G++
Sbjct: 614 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 673
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ +T+ G ++TE ++ + G++ +A
Sbjct: 674 VHAVITKT-GYDSETEVCNALISMYAKCGSISDA 706
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 215/472 (45%), Gaps = 2/472 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++HA + L L+ LY+ N + AR +FD + W ++I +
Sbjct: 167 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 226
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF ++ + P + ++ + AC + L +HG + G D+
Sbjct: 227 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 286
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV+ Y L + A +F +S D V N++I+G + CG+ +K+++LF M G
Sbjct: 287 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 346
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD TL L+ L GQ +H + K F S + + L+++YA+C + +A
Sbjct: 347 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 406
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++V W+ ++ Y D + FR++ ++ + S+L + ++
Sbjct: 407 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 466
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ F+L+ V S L+DMY+K G L + + ++++++ ++I G
Sbjct: 467 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 526
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+ F +A FR ++++G+ DE + + AC + +G++I + G +
Sbjct: 527 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSD 585
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+V L G +EE+Y + + D AL+S GN++ A
Sbjct: 586 LPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 636
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 203/463 (43%), Gaps = 36/463 (7%)
Query: 100 LKPDNFTYACITRAC-SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
++P++ T + C N L R +H + GL + S L Y + A
Sbjct: 40 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 99
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
KVFD + + + N MI A + LF M+ TP+E T G++
Sbjct: 100 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 159
Query: 219 SL-LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
S+ V + IH L V + L+ +Y+R ++ A VF+ L D +W A+
Sbjct: 160 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 219
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I+G S+ +A+ F + + G P +SVL+A K ++ G +HG V++ GF
Sbjct: 220 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 279
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
V +ALV +Y G L +F MS+R+ +TYN++I GL G+ +A E F+
Sbjct: 280 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 339
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE---------------------- 435
+ GL PD +T ++L+ AC G + G+++ T+
Sbjct: 340 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 399
Query: 436 -----EYGIQAKTEHYI---YMVKLLGLAGNLEEAYSFIWSLP-KPVDPA--VSGALLSC 484
+Y ++ + E+ + M+ GL +L ++ + + + P ++L
Sbjct: 400 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 459
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKV-MLSNTYAEDGRWD 526
C G+ +L E + Q+ + + + AY +L + YA+ G+ D
Sbjct: 460 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 502
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 14/272 (5%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+L +++HA + D + LV LY+ + + + F++T WN+++
Sbjct: 565 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 624
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ + +A +F + R + +NFT+ +A SE +++ + VH A+++ G
Sbjct: 625 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH--AVITKTG 682
Query: 137 RDSITS--SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
DS T +AL++ Y+K I +A K F VS + V N++I+ ++ GF ++L FD
Sbjct: 683 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 742
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSF----DSYDYVSSVLVSM 249
M+ P+ TLVG++S L V +GI F + S + YV +V M
Sbjct: 743 QMIHSNVRPNHVTLVGVLSACSHIGL--VDKGIAYFESMNSEYGLSPKPEHYV--CVVDM 798
Query: 250 YARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
R ++ A + PD + W L++
Sbjct: 799 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 830
>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 175/536 (32%), Positives = 286/536 (53%), Gaps = 6/536 (1%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ +++ ++H L K + D + A L+ LY+ + +ARILFD+ P R + WN
Sbjct: 161 KACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWN 220
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I Y + +A +L N LR D+ T + AC+E D +H +I
Sbjct: 221 AMISGYCQSGNAKEALTL-SNGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKH 276
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL + S+ L+ Y++ + + KVFD + DL+ NS+I + +++ LF
Sbjct: 277 GLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLF 336
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYAR 252
M PD TL+ L S L + + + + GF L+ + D + + +V MYA+
Sbjct: 337 QEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAK 396
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIAS 311
++SA VFN L + D+++W+ +I+GY+Q G +A+ + + +G+ A+ S
Sbjct: 397 LGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVS 456
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
VL A +++ + G +HG ++++G L V V ++L DMY KCG L + +F + N
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +N++I G HG +A F++++++G+ PD TF LL AC H GLV++G+ F
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFE 576
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M +YGI +HY MV + G AG LE A FI S+ D ++ GALLS C ++GN
Sbjct: 577 MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNV 636
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
DL +I + LFE +P Y V+LSN YA G+W+ V ++R GLRK G S
Sbjct: 637 DLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 692
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 123/517 (23%), Positives = 251/517 (48%), Gaps = 18/517 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K LHA + + +++ + KLV LY + AR FD R V+ WN +I
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 78 AYALAHRFNDAKSLFK-NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y A ++ F +L + L PD T+ + +AC D G + +H A+ G
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID--GNK-IHCLALKFGFM 182
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +++L+ YS+ + A +FD + D+ N+MISG+ G ++L L + +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ D T+V L+S E + G IH + +K +S +VS+ L+ +YA +
Sbjct: 243 ----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
VF+ ++ DL++W+++I Y +A+ F+++ + + D + + S+ +
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 317 AKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
++ ++ + G+ ++ G+ L + + +A+V MY+K G + VF + ++I++
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
N++I G +GF +A E + + E+G + ++ T+ ++L AC G + G ++ R+
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+ G+ + + G G LE+A S + +P+ V+ L++C +G+ + A
Sbjct: 479 KN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR-VNSVPWNTLIACHGFHGHGEKA 536
Query: 495 EIVAHQLFEN--DPRKGAYKVMLS----NTYAEDGRW 525
++ ++ + P + +LS + ++G+W
Sbjct: 537 VMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 573
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 152/303 (50%), Gaps = 20/303 (6%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
++L + +H +VS ++ S+ LV Y L + A FD + + D+ N MI
Sbjct: 65 TNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMI 124
Query: 178 SGFAHCGFWDKSLQLFD-WMLRLGKTPDEYTLVGLISGLWEPSLLSV------GQGIHGF 230
SG+ G + ++ F +ML G TPD T PS+L G IH
Sbjct: 125 SGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTF---------PSVLKACRTVIDGNKIHCL 175
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
LK F YV++ L+ +Y+R + +A +F+ + D+ +W+A+I+GY Q G+ +A
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L L + D V + S+L+A ++ + G IH Y I+HG E + VS+ L+D+
Sbjct: 236 LTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDL 291
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
Y++ G L +VF+ M R++I++NS+I L+ +A F+++ + PD T
Sbjct: 292 YAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTL 351
Query: 411 SAL 413
+L
Sbjct: 352 ISL 354
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L + +LH + K L D F T L +Y L A LF + P+ +
Sbjct: 457 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 516
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
WN++I + A LFK +L +KPD+ T+ + ACS +
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 565
>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/533 (30%), Positives = 264/533 (49%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L R ++LHA K + L+ LYA + +A F +T +V LWN ++
Sbjct: 404 TLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLV 463
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY L ++ +F+ + ++ P+ +TY I + C DL +H I +
Sbjct: 464 AYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQL 523
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++ S L+ Y+KL +D A + + D+V +MI+G+ F DK+L F ML
Sbjct: 524 NAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQML 583
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G DE L +S L GQ IH S F S + LV++Y+RC +
Sbjct: 584 DRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIE 643
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+Y F D + W+AL++G+ Q G+ +AL F ++N +G + S + AA+
Sbjct: 644 ESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAAS 703
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++AN+ G +H + + G++ V +AL+ MY+KCG + + F +S +N +++N+
Sbjct: 704 ETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNA 763
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I HGF +A + F +I + P+ T +L AC H GLV+ G F M EY
Sbjct: 764 IINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEY 823
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G+ K EHY+ +V +L AG L A FI +P D V LLS C ++ N ++ E
Sbjct: 824 GLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFA 883
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
AH L E +P A V+LSN YA +WD R + + G++KE G SW+
Sbjct: 884 AHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIE 936
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 113/423 (26%), Positives = 213/423 (50%), Gaps = 1/423 (0%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K++ SL ++LH+ + K L + + KL Y L A +FD+ P+R++F WN
Sbjct: 96 KTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWN 155
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS-DLPGLRFVHGGAIV 132
+I+ A + + LF ++ + P+ T++ + AC S + +H +
Sbjct: 156 KMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILY 215
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
GL ++ + L+ YS+ +D A +VFDG+ D +MISG + ++++L
Sbjct: 216 QGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRL 275
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F M LG P Y ++S + L +G+ +HG LK F S YV + LVS+Y
Sbjct: 276 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 335
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ SA H+F+++ D VT++ LI G SQ G KA+ F+++++ G + D +AS+
Sbjct: 336 LGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASL 395
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
+ A + ++ G +H Y + GF + + AL+++Y+KC + + F N+
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+ +N +++ GL +F FR + + + P++ T+ ++L C G + G +I ++
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 433 MTE 435
+ +
Sbjct: 516 IIK 518
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 210/454 (46%), Gaps = 1/454 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL K +SL ++LH LV K D + LV LY L SA +F QR
Sbjct: 294 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRD 353
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I + A LFK + L+PD+ T A + ACS + L + +H
Sbjct: 354 AVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHA 413
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G ++ AL+ Y+K + I+ A+ F ++VL N M+ +
Sbjct: 414 YTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRN 473
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S ++F M P++YT ++ L +G+ IH +K++F YV SVL+
Sbjct: 474 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLID 533
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ +++A+ + D+V+W+ +I GY+Q KAL FR++ +G ++D V
Sbjct: 534 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 593
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ + ++A A + G IH GF + +ALV +YS+CG + FE
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ I +N+++ G G +A F + +G++ + TF + + A + G++
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ +T+ G ++TE ++ + G++ +A
Sbjct: 714 VHAVITKT-GYDSETEVCNALISMYAKCGSISDA 746
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/472 (23%), Positives = 215/472 (45%), Gaps = 2/472 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++HA + L L+ LY+ N + AR +FD + W ++I +
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKN 266
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF ++ + P + ++ + AC + L +HG + G D+
Sbjct: 267 ECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 326
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV+ Y L + A +F +S D V N++I+G + CG+ +K+++LF M G
Sbjct: 327 NALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLE 386
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD TL L+ L GQ +H + K F S + + L+++YA+C + +A
Sbjct: 387 PDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++V W+ ++ Y D + FR++ ++ + S+L + ++
Sbjct: 447 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 506
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ F+L+ V S L+DMY+K G L + + ++++++ ++I G
Sbjct: 507 ELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 566
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+ F +A FR ++++G+ DE + + AC + +G++I + G +
Sbjct: 567 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSD 625
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+V L G +EE+Y + + D AL+S GN++ A
Sbjct: 626 LPFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 203/463 (43%), Gaps = 36/463 (7%)
Query: 100 LKPDNFTYACITRAC-SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
++P++ T + C N L R +H + GL + S L Y + A
Sbjct: 80 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGA 139
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
KVFD + + + N MI A + LF M+ TP+E T G++
Sbjct: 140 FKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGG 199
Query: 219 SL-LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
S+ V + IH L V + L+ +Y+R ++ A VF+ L D +W A+
Sbjct: 200 SVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAM 259
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I+G S+ +A+ F + + G P +SVL+A K ++ G +HG V++ GF
Sbjct: 260 ISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 319
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
V +ALV +Y G L +F MS+R+ +TYN++I GL G+ +A E F+
Sbjct: 320 SSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 379
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE---------------------- 435
+ GL PD +T ++L+ AC G + G+++ T+
Sbjct: 380 MHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 436 -----EYGIQAKTEHYI---YMVKLLGLAGNLEEAYSFIWSLP-KPVDPA--VSGALLSC 484
+Y ++ + E+ + M+ GL +L ++ + + + P ++L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKV-MLSNTYAEDGRWD 526
C G+ +L E + Q+ + + + AY +L + YA+ G+ D
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 14/272 (5%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+L +++HA + D + LV LY+ + + + F++T WN+++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ + +A +F + R + +NFT+ +A SE +++ + VH A+++ G
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVH--AVITKTG 722
Query: 137 RDSITS--SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
DS T +AL++ Y+K I +A K F VS + V N++I+ ++ GF ++L FD
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 782
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-CLKSSF----DSYDYVSSVLVSM 249
M+ P+ TLVG++S L V +GI F + S + YV +V M
Sbjct: 783 QMIHSNVRPNHVTLVGVLSACSHIGL--VDKGIAYFESMNSEYGLSPKPEHYV--CVVDM 838
Query: 250 YARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
R ++ A + PD + W L++
Sbjct: 839 LTRAGLLSRAKEFIQEMPIKPDALVWRTLLSA 870
>gi|356518094|ref|XP_003527718.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Glycine max]
Length = 714
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/511 (33%), Positives = 279/511 (54%), Gaps = 6/511 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +HA KA L DP + L +YA + L ++++LF + +++V WN++I AY
Sbjct: 164 RSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQN 223
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A FK +L+ +P T + A + +P VH I G D+
Sbjct: 224 GFEDKAVLCFKEMLKEGWQPSPVTMMNLMSA----NAVP--ETVHCYIIKCGFTGDASVV 277
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LV Y+K D A +++ DL+ +IS ++ G + +++ F L+L
Sbjct: 278 TSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGIISSYSEKGEVESAVECFIQTLKLDIK 337
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD L+ ++ G+ +PS ++G HG+ LK+ + V++ L+S Y+R + + +A +
Sbjct: 338 PDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLTNDCLVANGLISFYSRFDEILAALSL 397
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F L+TW+++I+G Q G A+ F ++NM G+K D + IAS+L+ + +
Sbjct: 398 FFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQMNMCGQKPDAITIASLLSGCCQLGYL 457
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +HGY++++ ++ +AL+DMY+KCG L ++F ++++ ++T+NS+I G
Sbjct: 458 RIGETLHGYILRNNVKVEDFTGTALIDMYTKCGRLDYAEKIFYSINDPCLVTWNSIISGY 517
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
L+G ++AF F + E+GL PD+ TF +L AC HGGLV G E F M +EYG+
Sbjct: 518 SLYGLEHKAFGCFSKLQEQGLEPDKITFLGVLAACTHGGLVYAGMEYFRIMRKEYGLMPT 577
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY +V LLG AG +EA I ++ D AV GALLS C I L E +A LF
Sbjct: 578 LQHYACIVGLLGRAGLFKEAIEIINNMEIRPDSAVWGALLSACWIQQEVKLGECLAKNLF 637
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
+ + G + V LSN YA GRWDDV ++RD
Sbjct: 638 LLNYKNGGFYVSLSNLYAIVGRWDDVARVRD 668
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 202/436 (46%), Gaps = 11/436 (2%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ T L+ Y AR LF+ P V WN +I Y+ +DA LF ++LR
Sbjct: 79 YVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQLFVHMLRE 138
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+P+ T A + +C R VH I +GLG D S+AL + Y+K ++ +
Sbjct: 139 SFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSMYAKCDDLEAS 198
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F + + +++ N+MI + GF DK++ F ML+ G P T++ L+S
Sbjct: 199 QLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTMMNLMSA---- 254
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+V + +H + +K F V + LV +YA+ + A ++ DL++ + +I
Sbjct: 255 --NAVPETVHCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPTKDLISLTGII 312
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+ YS++G+ A+ F + K D V + SVL + ++ G HGY +++G
Sbjct: 313 SSYSEKGEVESAVECFIQTLKLDIKPDAVALISVLHGISDPSHFAIGCAFHGYGLKNGLT 372
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V++ L+ YS+ + + +F SE+ +IT+NS+I G G + A E F +
Sbjct: 373 NDCLVANGLISFYSRFDEILAALSLFFDRSEKPLITWNSMISGCVQAGKSSDAMELFCQM 432
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY--IYMVKLLGLA 456
G PD T ++LL CC G + G + + K E + ++ +
Sbjct: 433 NMCGQKPDAITIASLLSGCCQLGYLRIGETLHGYILRN---NVKVEDFTGTALIDMYTKC 489
Query: 457 GNLEEAYSFIWSLPKP 472
G L+ A +S+ P
Sbjct: 490 GRLDYAEKIFYSINDP 505
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 170/345 (49%), Gaps = 15/345 (4%)
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC-----SENSDLPG----LRFVHGG 129
++L H + A +F+ LL++ P++ T++ + +AC S + P + +
Sbjct: 9 HSLFHDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQ 68
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ G+ + ++AL+ Y KL A ++F+ + D+V N +I G++ G +
Sbjct: 69 LLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDA 128
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
LQLF MLR P++ T+ L+ L G+ +H F +K+ +S+ L SM
Sbjct: 129 LQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTSM 188
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C+ + ++ +F + ++++W+ +I Y Q G KA+ F+++ +G + PV +
Sbjct: 189 YAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVTM 248
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+++ SAN P V H Y+I+ GF V ++LV +Y+K G+ + ++E
Sbjct: 249 MNLM-----SANAVPETV-HCYIIKCGFTGDASVVTSLVCLYAKQGFTDMAKLLYECYPT 302
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+++I+ +I G A E F ++ + PD ++L
Sbjct: 303 KDLISLTGIISSYSEKGEVESAVECFIQTLKLDIKPDAVALISVL 347
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 13/247 (5%)
Query: 182 HCGFWDKS--LQLFDWMLRLGKTPDEYTLVGLISGLW----------EPSLLSVGQGIHG 229
H F D S L +F +L+ P+ T LI + L V Q I
Sbjct: 9 HSLFHDASSALLIFRQLLQSSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQ-IQT 67
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
LK D + YV++ L+ Y + A +F L D+V+W+ LI GYSQ G
Sbjct: 68 QLLKRGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHD 127
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL F + + + + IAS+L + + G +H + I+ G L +S+AL
Sbjct: 128 ALQLFVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSVHAFGIKAGLGLDPQLSNALTS 187
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MY+KC L +F+ M E+N+I++N++I G +GF +A F++++++G P T
Sbjct: 188 MYAKCDDLEASQLLFQEMGEKNVISWNTMIGAYGQNGFEDKAVLCFKEMLKEGWQPSPVT 247
Query: 410 FSALLCA 416
L+ A
Sbjct: 248 MMNLMSA 254
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 286 DYGKALYYFRKLNMQGKKADP------VLIASVLAAAAKSANVWPGA-----VIHGYVIQ 334
D AL FR+L +Q A+P +LI + L++++ + P A I +++
Sbjct: 14 DASSALLIFRQL-LQ-SSANPNHLTFSLLIKACLSSSSSFSRGSPTAWLQVNQIQTQLLK 71
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G + + V++AL+D Y K G+ Q+FE + +++++N +I G HG + A +
Sbjct: 72 RGIDQFLYVNTALIDFYMKLGFTTHARQLFEDLPSADVVSWNVLICGYSQHGHPHDALQL 131
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
F ++ + P+++T ++LL +C L GR + +GI+A
Sbjct: 132 FVHMLRESFRPNQTTIASLLPSCGRRELFLQGRSV-----HAFGIKA 173
>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
[Vitis vinifera]
Length = 707
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 177/560 (31%), Positives = 297/560 (53%), Gaps = 16/560 (2%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
+LH L + SL+ K +H+ L + LL P + +L+ LY+ L SAR LFD
Sbjct: 23 SLHHFYDHLLQCCTSLTTLKLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFD 82
Query: 63 K--------TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
T + FL N+++RAYA A R +A L+ + R + +NFTY + + C
Sbjct: 83 HRHHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVC 142
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCN 174
+ VHG + +G G D +ALV Y+K I +A +VFD + D+V
Sbjct: 143 ASELGAVFGEVVHGQVVRTGFGSDLFVEAALVDMYAKCGEIGDAHEVFDRMLIRDVVCWT 202
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
+MI+ + K+L LF M G DE T + + S + + + +HG+ + +
Sbjct: 203 AMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLN 262
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
F V + +V MYA+C + A VF+ + + ++W+++++GY+Q G AL F
Sbjct: 263 GFIGDVSVGNSIVGMYAKCGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLF 322
Query: 295 RKLNMQGKKADPVLIASVLAAAAKS--ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
+ MQ + DP + +++ +A S + G +H +VI ++ + +A++DMY
Sbjct: 323 NQ--MQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYM 380
Query: 353 KCGYLGLGIQVFET--MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
KCG L +++F + ER++ ++N +I G G+HG +A E F + +G+ P++ TF
Sbjct: 381 KCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITF 440
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+++L AC H GL+++GR+ F MT + ++ + +HY MV +LG AG L EA+ I +P
Sbjct: 441 TSILSACSHAGLIDEGRKCFADMT-KLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIP 499
Query: 471 KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMK 530
V GALL C I+GN++L EI A+ LF+ +P Y V++SN YA +W +V
Sbjct: 500 SRPSDEVWGALLLACRIHGNTELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEM 559
Query: 531 LRDDIVDNGLRKEAGVSWVS 550
+R ++ GL+K A S +
Sbjct: 560 VRQNMKSRGLKKPAAFSVIE 579
>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g57430, chloroplastic; Flags: Precursor
gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 890
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 165/547 (30%), Positives = 288/547 (52%), Gaps = 15/547 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L K++HA + L + F LV +Y L S+++L R + WN+++
Sbjct: 216 EGLMMGKQVHAYGLRKGEL-NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-L 135
+ + +A + ++ ++PD FT + + ACS L + +H A+ +G L
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+S SALV Y + +VFDG+ D + L N+MI+G++ ++L LF
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 196 MLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G + T+ G++ S + IHGF +K D +V + L+ MY+R
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGK----------K 303
++ A +F + DLVTW+ +ITGY + AL K+ N++ K K
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ + + ++L + A + + G IH Y I++ V V SALVDMY+KCG L + +V
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKV 574
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ + ++N+IT+N +I+ G+HG +A + R ++ +G+ P+E TF ++ AC H G+V
Sbjct: 575 FDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMV 634
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALL 482
++G IF M +YG++ ++HY +V LLG AG ++EAY + +P+ + A + +LL
Sbjct: 635 DEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLL 694
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
I+ N ++ EI A L + +P ++ V+L+N Y+ G WD ++R ++ + G+RK
Sbjct: 695 GASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRK 754
Query: 543 EAGVSWV 549
E G SW+
Sbjct: 755 EPGCSWI 761
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 115/430 (26%), Positives = 195/430 (45%), Gaps = 18/430 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
Q + K++HA V K D A LV LY + +FD+ +R+ WNS+
Sbjct: 111 QDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSL 170
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL---RFVHGGAIV 132
I + ++ A F+ +L ++P +FT + ACS GL + VH +
Sbjct: 171 ISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G +S + LV Y KL + + + DLV N+++S ++L+
Sbjct: 231 KG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEY 289
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-SFDSYDYVSSVLVSMYA 251
M+ G PDE+T+ ++ +L G+ +H + LK+ S D +V S LV MY
Sbjct: 290 LREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYC 349
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIA 310
C + S VF+ +F + W+A+I GYSQ +AL F + G A+ +A
Sbjct: 350 NCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMA 409
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
V+ A +S IHG+V++ G + V + L+DMYS+ G + + +++F M +R
Sbjct: 410 GVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDR 469
Query: 371 NIITYNSVILG-----------LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+++T+N++I G L LH + + L P+ T +L +C
Sbjct: 470 DLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAA 529
Query: 420 GGLVNDGREI 429
+ G+EI
Sbjct: 530 LSALAKGKEI 539
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 187/373 (50%), Gaps = 11/373 (2%)
Query: 55 PSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
PS I ++P+ W ++R+ ++ +A + +++ +KPDN+ + + +A
Sbjct: 52 PSIFISQSRSPE----WWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAV 107
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSIT-SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
++ D+ + +H G G DS+T ++ LV Y K KVFD +S+ + V
Sbjct: 108 ADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSW 167
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQGIHGF 230
NS+IS W+ +L+ F ML P +TLV ++ S L P L +G+ +H +
Sbjct: 168 NSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAY 227
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
L+ + ++ + LV+MY + + S+ + S DLVTW+ +++ Q +A
Sbjct: 228 GLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEA 286
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVD 349
L Y R++ ++G + D I+SVL A + + G +H Y +++G + + V SALVD
Sbjct: 287 LEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVD 346
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK-GLNPDES 408
MY C + G +VF+ M +R I +N++I G + +A F + E GL + +
Sbjct: 347 MYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST 406
Query: 409 TFSALLCACCHGG 421
T + ++ AC G
Sbjct: 407 TMAGVVPACVRSG 419
>gi|413918573|gb|AFW58505.1| hypothetical protein ZEAMMB73_474993 [Zea mays]
Length = 773
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 163/547 (29%), Positives = 284/547 (51%), Gaps = 15/547 (2%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
LE L+ + LH V K + P + L +Y+ A LF + P++ V
Sbjct: 227 LEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTEDACALFLELPEKDV 286
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
W S+I Y +A LF+ ++ + L+PD +C+ N ++ G + H
Sbjct: 287 VSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLGNNGNVHGGKTFHAV 346
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
G + +AL++ Y K ++D A +VF + D N M+ G+ G K
Sbjct: 347 ITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNLMVVGYCKAGCDVKC 406
Query: 190 LQLFDWMLRLGKTPDEY-------TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
L+L+ M + D+Y +LV IS + L +G+ H + +K D V
Sbjct: 407 LELYREM----QLRDKYEFWCVADSLVSAISSCSRLAELRLGRSAHCYSIKHLLDEDSSV 462
Query: 243 SSVLVSMYARCNCMNSAYHVFN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
++VL+ MY RC + A +F + D+VTW+ LI+ Y+ G A+ + ++ ++G
Sbjct: 463 ANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNAAMSLYDQMLIEG 522
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ + +V++A A + G IH YV + G++ V +++AL+DMY+KCG LG+
Sbjct: 523 LTPNSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGIAR 582
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
++F++M + +++ +N +I G G+HG QA E F + + P+ TF A+L A CH G
Sbjct: 583 RIFDSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSALCHSG 642
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
L+ +GR++FTRM + Y ++ +HY MV LLG +G+L+EA + ++P D + G L
Sbjct: 643 LLEEGRKVFTRMGK-YSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPIEPDGGIWGTL 701
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
LS C ++ N ++ +A + F +DP Y +++SN+Y +WD++ KLR+ + + G++
Sbjct: 702 LSACKLHDNFEMGLRIAKKAFASDPENEGYYILISNSYGGAKKWDEIEKLRETMKNLGVQ 761
Query: 542 KEAGVSW 548
K GV W
Sbjct: 762 K--GVGW 766
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 184/383 (48%), Gaps = 8/383 (2%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+HAL + L + P A KLV Y+ A + F +P+ FLWNS+IR + A
Sbjct: 31 RVHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCAS 90
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL----GRDS 139
F A S + +L + +P FT A +E L VH + GL G
Sbjct: 91 DFVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSV 150
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+S+LV Y++ + +A+KVF+ + + D+V ++ISG G + L+ M+RL
Sbjct: 151 AVASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRL 210
Query: 200 GK----TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
P+ T+ + L+ G+ +HG+ +K V S L SMY++C
Sbjct: 211 AGDGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYS 270
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A +F L D+V+W++LI Y ++G +A+ F+++ G + D +L++ VL+
Sbjct: 271 TEDACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSG 330
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ NV G H + + F SV++ +AL+ MY K + +VF + +R+ ++
Sbjct: 331 LGNNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSW 390
Query: 376 NSVILGLGLHGFTYQAFEFFRDI 398
N +++G G + E +R++
Sbjct: 391 NLMVVGYCKAGCDVKCLELYREM 413
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 192/405 (47%), Gaps = 12/405 (2%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR--- 97
A+ LV +YA + A +F++ P+R V W ++I + ++R
Sbjct: 153 ASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLAG 212
Query: 98 -TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
++P++ T AC +L R +HG + G+G + SAL + YSK +
Sbjct: 213 DGSVRPNSRTMESGLEACGVLDELNSGRCLHGYVVKVGIGDSPMVISALFSMYSKCYSTE 272
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A +F + + D+V S+I + G ++++LF M+ G PDE + ++SGL
Sbjct: 273 DACALFLELPEKDVVSWTSLIGIYCRRGLITEAMELFQQMMESGLQPDEILVSCVLSGLG 332
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ G+ H K +F + + L+SMY + ++SA VF L D +W+
Sbjct: 333 NNGNVHGGKTFHAVITKRNFGDSVLIGNALISMYGKFEMVDSAGRVFRLLHQRDADSWNL 392
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGK-----KADPVLIASVLAAAAKSANVWPGAVIHGY 331
++ GY + G K L +R++ ++ K AD ++ S +++ ++ A + G H Y
Sbjct: 393 MVVGYCKAGCDVKCLELYREMQLRDKYEFWCVADSLV--SAISSCSRLAELRLGRSAHCY 450
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSVILGLGLHGFTYQ 390
I+H + V++ L+ MY +CG ++F + +++T+N++I G +
Sbjct: 451 SIKHLLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNA 510
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
A + ++ +GL P+ +T ++ AC + + G +I + + E
Sbjct: 511 AMSLYDQMLIEGLTPNSTTLITVISACANLVALERGEKIHSYVKE 555
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 8/209 (3%)
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H + S +++ LVS Y+ A F++ PD W++LI + D
Sbjct: 32 VHALAVTSGLYQRPDLAAKLVSAYSSAGRPGLAALAFSASPRPDAFLWNSLIRTHHCASD 91
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL----SVM 342
+ AL R++ G + P +A+A+ + GA +H Y +++G + SV
Sbjct: 92 FVAALSAHRRMLASGARPSPFTAPLAASASAELGALGVGAAVHAYCVRYGLLVGDGDSVA 151
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII--- 399
V+S+LV MY++CG + ++VFE M ER+++ + +VI G +G + + + +++
Sbjct: 152 VASSLVYMYARCGNVRDAVKVFEEMPERDVVAWTAVISGCVRNGESGEGLRYLVEMVRLA 211
Query: 400 -EKGLNPDESTFSALLCACCHGGLVNDGR 427
+ + P+ T + L AC +N GR
Sbjct: 212 GDGSVRPNSRTMESGLEACGVLDELNSGR 240
>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 662
Score = 288 bits (737), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 285/534 (53%), Gaps = 3/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL+ K LH + K+ L F+ KL+ Y +V+ AR LFD+ P R + WNS+I
Sbjct: 15 KSLTTLKSLHTHILKSGSLF-SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMI 73
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
++ + +A L+ N+L + PD +T++ I +A SE + HG A+V G
Sbjct: 74 SSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFE 133
Query: 137 -RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++ +V Y+K + +A VFD V D D+VL ++I G+ G ++L++F+
Sbjct: 134 VSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEVFED 193
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ P+EYTL ++ L G+ IHG +K +S + L++MY++CN
Sbjct: 194 MVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVASQTSLLTMYSKCNM 253
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ + VFNSL + VTW++ I G Q G AL FR++ + ++S+L A
Sbjct: 254 VEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHA 313
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ A + G IH ++ G + + V +AL+ +Y KCG + VF++++E +I++
Sbjct: 314 CSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKARSVFDSLTELDIVSI 373
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N++I +GF ++A E F + + GL P+ TF ++L AC + GLV +G +IF+ +
Sbjct: 374 NTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRN 433
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+ I+ +HY M+ LLG A EEA I P D LL+ C I+G ++AE
Sbjct: 434 NHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGKNP-DVIQWRTLLNACKIHGEVEMAE 492
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ + PR G ++L+N YA G+WD+V++++ D L+K +SWV
Sbjct: 493 KFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWV 546
>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15130
gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 689
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 267/495 (53%), Gaps = 4/495 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+FD P+R+V W++++ + L + SLF + R + P+ FT++ +AC +
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L +HG + G ++LV YSK I+EA KVF + D L+ N+MI+G
Sbjct: 123 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 182
Query: 180 FAHCGFWDKSLQLFDWMLR--LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
F H G+ K+L F M + + PDE+TL L+ ++ G+ IHGF ++S F
Sbjct: 183 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 242
Query: 238 --SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
S ++ LV +Y +C + SA F+ + +++WS+LI GY+Q+G++ +A+ F+
Sbjct: 243 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 302
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+L + D ++S++ A A + G + ++ L V +++VDMY KCG
Sbjct: 303 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 362
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + F M +++I++ VI G G HG ++ F +++ + PDE + A+L
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H G++ +G E+F+++ E +GI+ + EHY +V LLG AG L+EA I ++P +
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ LLS C ++G+ +L + V L D + A VM+SN Y + G W++ R+
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542
Query: 536 VDNGLRKEAGVSWVS 550
GL+KEAG+SWV
Sbjct: 543 NIKGLKKEAGMSWVE 557
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 121/225 (53%), Gaps = 2/225 (0%)
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
LV ++ L G +H + LKS S+ L+ MY +C AY VF+S+
Sbjct: 8 NLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM 67
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGA 326
++V+WSAL++G+ GD +L F ++ QG + ++ L A + G
Sbjct: 68 PERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGL 127
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
IHG+ ++ GFE+ V V ++LVDMYSKCG + +VF + +R++I++N++I G G
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 387 FTYQAFEFFRDIIEKGLN--PDESTFSALLCACCHGGLVNDGREI 429
+ +A + F + E + PDE T ++LL AC G++ G++I
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232
>gi|413944103|gb|AFW76752.1| hypothetical protein ZEAMMB73_846363 [Zea mays]
Length = 562
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/549 (31%), Positives = 279/549 (50%), Gaps = 3/549 (0%)
Query: 5 LHFLVLELSKSHQSLSRTKELH--ALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
L+ +L+ S + + K +H A++ ++ D TKLV Y+ + +AR +FD
Sbjct: 13 LYSSLLQSSMGANAFRQGKSVHHRAIITSSASPPDLHLNTKLVIFYSHFGDVAAARRVFD 72
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
P RSV W +++ YA R +A LF +LR+ +P+ FT+ RAC+
Sbjct: 73 GMPHRSVVSWTAMVSGYAKNSRPQEALDLFAFMLRSGARPNQFTFGSAVRACTGARCARS 132
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+H A D SAL+ + + + +A ++F + DLV NS++ GF
Sbjct: 133 GEQIHACAAKGRFAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNSLMRGFVE 192
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+ +L LFD MLR G PD +T + S+L + IH +K + +
Sbjct: 193 REHCNDALGLFDSMLRDGMLPDHFTFGSALKACGAISVLFNVELIHACIIKLGYWDENVA 252
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQG 301
+ L+ YA+C ++SA +++S+ PDLV+ +ALI+GYS +Y A+ F K++ +G
Sbjct: 253 IASLIDSYAKCRSLSSARVIYDSMCEPDLVSSTALISGYSMDRNYSDDAMKLFCKIHRKG 312
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D +L++S+L A A++ G IH Y+ + + + +ALVDMY+K G
Sbjct: 313 LRIDAILLSSLLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEFLDSR 372
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ F+ M RN+I++ S+I HGF A F + E G+ P++ TF +LL AC H G
Sbjct: 373 RAFDEMPNRNVISWTSLITSCAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSG 432
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
++N G E FT M +YGI + +HY V LL G LE+A+ + + ++ G +
Sbjct: 433 MMNKGMEYFTSMMSKYGIDPRFKHYSSAVDLLARGGQLEDAWMLVQNTNTECKSSMYGTM 492
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L C ++GN L E A L DP +L+N YAE W+D + R +V+
Sbjct: 493 LGACKVHGNMPLGETAAKNLLSIDPESSVNYAVLANMYAESHLWEDAQRTRKLLVETSKG 552
Query: 542 KEAGVSWVS 550
KEAG S +S
Sbjct: 553 KEAGFSVIS 561
>gi|87241257|gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
small; Tetratricopeptide-like helical [Medicago
truncatula]
Length = 971
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 294/578 (50%), Gaps = 38/578 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLP---SARILFDKTP 65
+L + + +SL + K++ A + L+ + F A++LV AL+ RIL+ +
Sbjct: 60 LLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILY-RIK 118
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKN-LLRTQLKPDNFTYACITRAC-SENSDLPGL 123
+ +VF WN+ IR Y + L+K LL LKPDN TY + + C + S GL
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
V G + G D +A +T + A VF+ DLV NSMI+G
Sbjct: 179 G-VLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++++++ M P+E T++G+IS + L++G+ H + + + ++
Sbjct: 238 GLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ-------------------- 283
+ L+ MY +C + +A +F+++ LV+W+ ++ GY++
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 284 ----------QGDYGK-ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
Q GK AL F ++ ++ + D V + + L+A ++ + G IH Y+
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+H + V + +ALVDMY+KCG + +QVFE + +RN +T+ +VI GL LHG A
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
+F +I G+ PDE TF +L ACCHGGLV +GR+ F+ M+ ++ + K +HY MV L
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG+LEEA + ++P D AV GAL C +YGN + E A +L E DP+
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L++ Y+E W + R + D G+ K G S V
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVE 635
>gi|357469751|ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506215|gb|AES87357.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1026
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 294/578 (50%), Gaps = 38/578 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLP---SARILFDKTP 65
+L + + +SL + K++ A + L+ + F A++LV AL+ RIL+ +
Sbjct: 60 LLSILERCKSLVQLKQIQAQMVSTGLIENGFAASRLVAFCALSESKELDYCTRILY-RIK 118
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKN-LLRTQLKPDNFTYACITRAC-SENSDLPGL 123
+ +VF WN+ IR Y + L+K LL LKPDN TY + + C + S GL
Sbjct: 119 ELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCLGL 178
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
V G + G D +A +T + A VF+ DLV NSMI+G
Sbjct: 179 G-VLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVRDLVTWNSMITGCVKR 237
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++++++ M P+E T++G+IS + L++G+ H + + + ++
Sbjct: 238 GLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLT 297
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ-------------------- 283
+ L+ MY +C + +A +F+++ LV+W+ ++ GY++
Sbjct: 298 NALMDMYVKCGELLTARVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVV 357
Query: 284 ----------QGDYGK-ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
Q GK AL F ++ ++ + D V + + L+A ++ + G IH Y+
Sbjct: 358 PWNAIISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYI 417
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+H + V + +ALVDMY+KCG + +QVFE + +RN +T+ +VI GL LHG A
Sbjct: 418 ERHKLSIDVALGTALVDMYAKCGNIARALQVFEEIPQRNCLTWTAVICGLALHGNAQDAL 477
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
+F +I G+ PDE TF +L ACCHGGLV +GR+ F+ M+ ++ + K +HY MV L
Sbjct: 478 SYFSKMIHIGIVPDEITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDL 537
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG+LEEA + ++P D AV GAL C +YGN + E A +L E DP+
Sbjct: 538 LGRAGHLEEAEELVKNMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNY 597
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L++ Y+E W + R + D G+ K G S V
Sbjct: 598 VLLASMYSEAKMWKEARSARKLMNDKGVEKTPGCSLVE 635
>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 766
Score = 288 bits (736), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 163/549 (29%), Positives = 283/549 (51%), Gaps = 11/549 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L++ S+ +HA + F +T L+ +YA + + +F+ + +
Sbjct: 177 ILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVN 236
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I + + DA LF ++ + PD T+ + +A D+ + V G
Sbjct: 237 VVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSG 296
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC------NSMISGFAH 182
A+ G+ +++ +AL+ SK + EA +F+ + C N+MISG+
Sbjct: 297 YALELGVDSNTLVGTALIDMNSKCGSLQEARSIFN----SHFITCRFNAPWNAMISGYLR 352
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDY 241
GF +K+L+LF M + D YT + + + LS+G+ +H +KS + +Y
Sbjct: 353 SGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVS 412
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+S+ + + YA+C + VFN + DL++W++L+T YSQ ++ KA+ F + +G
Sbjct: 413 ISNAVANAYAKCGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEG 472
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ +SVL + A + G +HG + + G ++ + SALVDMY+KCG LG
Sbjct: 473 IAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAK 532
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF +S + +++ ++I G HG A + FR +++ G+ P+ TF +L AC HGG
Sbjct: 533 KVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGG 592
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV +G + F M + YG+ + EHY +V LL G+L +A FI +P + V L
Sbjct: 593 LVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTL 652
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L C ++GN +L E+ A ++ A V+LSNTY E G + D + LR + + G++
Sbjct: 653 LGACRVHGNVELGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVK 712
Query: 542 KEAGVSWVS 550
KE G SW+S
Sbjct: 713 KEPGCSWIS 721
Score = 168 bits (425), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 187/373 (50%), Gaps = 3/373 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
LFD+ QR+ F W +I A F D F + + PD F Y+ I + C
Sbjct: 127 LFDQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDS 186
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ VH ++ G + S+AL+ Y+KL I+++ KVF+ +++ ++V N+MI+G
Sbjct: 187 IELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITG 246
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
F + + LF M+ G TPD T +G+ + ++ + + G+ L+ DS
Sbjct: 247 FTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSN 306
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT--WSALITGYSQQGDYGKALYYFRKL 297
V + L+ M ++C + A +FNS F W+A+I+GY + G KAL F K+
Sbjct: 307 TLVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKM 366
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGY 356
D SV A A + G +H I+ G E++ V +S+A+ + Y+KCG
Sbjct: 367 CQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAKCGS 426
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
L +VF M +R++I++ S++ +A E F ++ +G+ P++ TFS++L +
Sbjct: 427 LEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSVLVS 486
Query: 417 CCHGGLVNDGREI 429
C + L+ G+++
Sbjct: 487 CANLCLLEYGQQV 499
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 155/327 (47%), Gaps = 4/327 (1%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDS--ITSSALVTAYSKLSLIDEAIKVFDGVSD 167
+ R C + L + VHG + S + + + AYSK S ID A ++FD +S
Sbjct: 74 LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQMSQ 133
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
+ +I+G A G + + F M G PD++ G++ + +G +
Sbjct: 134 RNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNMV 193
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
H + F S+ +VS+ L++MYA+ + +Y VFN++ ++V+W+A+ITG++ Y
Sbjct: 194 HAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFTSNDLY 253
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
A F ++ +G D V A +V + GY ++ G + + +V +AL
Sbjct: 254 LDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVGTAL 313
Query: 348 VDMYSKCGYLGLGIQVFET--MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
+DM SKCG L +F + ++ R +N++I G GF +A E F + + +
Sbjct: 314 IDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYL 373
Query: 406 DESTFSALLCACCHGGLVNDGREIFTR 432
D T+ ++ A ++ G+++ R
Sbjct: 374 DHYTYCSVFNAIAALKCLSLGKKVHAR 400
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 140/286 (48%), Gaps = 13/286 (4%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS----MYARCNCMNSAYHVF 263
LV L+ + L + +HGF LKS F ++ S VL++ Y++C+ +++A +F
Sbjct: 71 LVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHH--SLVLLNHVAHAYSKCSDIDAACRLF 128
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + + +W+ LI G ++ G + +F ++ QG D + +L ++
Sbjct: 129 DQMSQRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIE 188
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H ++ GF VS+AL++MY+K + +VF TM+E N++++N++I G
Sbjct: 189 LGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQEIEDSYKVFNTMTEVNVVSWNAMITGFT 248
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+ AF+ F ++ +G+ PD TF + A VN +E+ + E G+ + T
Sbjct: 249 SNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEV-SGYALELGVDSNT 307
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWS------LPKPVDPAVSGALLS 483
++ + G+L+EA S S P + +SG L S
Sbjct: 308 LVGTALIDMNSKCGSLQEARSIFNSHFITCRFNAPWNAMISGYLRS 353
>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 904
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 169/559 (30%), Positives = 286/559 (51%), Gaps = 33/559 (5%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H L+ K +D F LV YA L AR +FD+ +R+V W S+I YA
Sbjct: 154 QIHGLIIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARRE 213
Query: 84 RFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
DA LF ++R + + P++ T C+ AC++ DL V+ SG+ + +
Sbjct: 214 FAKDAVDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMI 273
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K + ID A ++FD +L LCN+M S + G ++L + + M+ G
Sbjct: 274 SALVDMYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIR 333
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +++ IS + + G+ HG+ L++ F+S+D + + L+ MY +C+ ++A+ +
Sbjct: 334 PDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 393
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN------------------------ 298
F+ + + +VTW++++ GY + G+ A F +
Sbjct: 394 FDRMSNKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAI 453
Query: 299 -----MQGKKA---DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
MQ ++ D V + S+ +A + I+ Y+ ++ +L V + + LVDM
Sbjct: 454 EVFHYMQSQECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDM 513
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
+S+CG + +F +++ R++ + + I + + G +A E F ++IE+GL PD F
Sbjct: 514 FSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVF 573
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
L ACCHGGLV G+EIF M + +G+ + HY MV LLG AG LEEA I +P
Sbjct: 574 IGALTACCHGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMP 633
Query: 471 KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMK 530
+ + +LL+ C + GN ++A A ++ P + V+LSN YA GRW+D+ K
Sbjct: 634 TEPNDVIWNSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAK 693
Query: 531 LRDDIVDNGLRKEAGVSWV 549
+R + + GLRK G S +
Sbjct: 694 VRLSMKEKGLRKPPGTSVI 712
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 218/454 (48%), Gaps = 9/454 (1%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRL---YALNNVLPSARILFDKTPQR-SV 69
K+ +++ K H + K L D TKLV L A+ +F+ +
Sbjct: 39 KNCKTIDELKMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTC 98
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
F++NS+IR YA + +A LF ++ + + PD +T+ C+++ D +HG
Sbjct: 99 FMYNSLIRGYASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGL 158
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
I +D ++LV Y++ +D A KVFD +S+ ++V SMI G+A F +
Sbjct: 159 IIKMDYAKDLFVQNSLVHFYAECGELDCARKVFDEMSERNVVSWTSMICGYARREFAKDA 218
Query: 190 LQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ LF M+R P+ T+V +IS + L G+ ++ F S + D + S LV
Sbjct: 219 VDLFFRMVRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVD 278
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +CN ++ A +F+ +L +A+ + Y +QG +AL + G + D +
Sbjct: 279 MYMKCNAIDIAKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRIS 338
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ S +++ ++ N+ G HGYV+++GFE + +AL+DMY KC ++F+ MS
Sbjct: 339 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMS 398
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ ++T+NS++ G +G A+E F + EK + + SAL+ + + E
Sbjct: 399 NKTVVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALV----QENMYEEAIE 454
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+F M + + + + G G L+ A
Sbjct: 455 VFHYMQSQECVNVDGVTMMSIASACGHLGALDLA 488
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 72/164 (43%), Gaps = 2/164 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K ++ + K + D T LV +++ SA +F+ R V W + I
Sbjct: 484 ALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIG 543
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTY-ACITRACSENSDLPGLRFVHGGAIVSGLG 136
A A+A A LF ++ LKPD + +T C G + + G+
Sbjct: 544 AMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGGLVQQGKEIFNSMEKLHGVS 603
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVF-DGVSDPDLVLCNSMISG 179
+ + +V + L++EA+++ D ++P+ V+ NS+++
Sbjct: 604 PEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSLLAA 647
>gi|449434412|ref|XP_004134990.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Cucumis sativus]
Length = 704
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 169/535 (31%), Positives = 287/535 (53%), Gaps = 6/535 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
+ Q + K +H L KA L D LV +Y L ++LF + ++SV WN+
Sbjct: 176 TQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNT 235
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I A+ F++A +FK +L + ++ T I A + +H A G
Sbjct: 236 MIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIG 289
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L + ++LV +Y K I+ A ++ +LV ++IS +A G ++L+
Sbjct: 290 LVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYS 349
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ L D +VG+I G P + +G HG+ +KS V++ +SMY++ +
Sbjct: 350 IVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFD 409
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+++ + +F + L +W+++I+ +Q G A+ F ++ + G D + +AS+L+
Sbjct: 410 NIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLS 469
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A ++ N+ G ++H Y++++ +L V +ALVDMY KCG + VF++M E + +
Sbjct: 470 ACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLAS 529
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS+I G GL GF A + +++EKG+ P++ TFS +L AC HGGLV +GR+ F M
Sbjct: 530 WNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMK 589
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+++GI +++H MV +LG AG EEA FI ++ D AV GALLS C I+ L
Sbjct: 590 KKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLG 649
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E VA +LF ++ R G + V++SN YA RW+DV ++R + + G +GVS V
Sbjct: 650 ESVAKKLFFSNCRNGGFFVLMSNLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 6/389 (1%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ +T + LY+ + +A+ LFD P++ V WN++I Y +DA LF + R
Sbjct: 99 YVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRR 158
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+ P T + +C + +HG + +GL DS +ALV+ Y K + +D
Sbjct: 159 EFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGV 218
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F +++ +V N+MI F G + +++ +F ML + T+V ++S
Sbjct: 219 KLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANT 278
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
IH + K V + LV Y +C + A ++ S +LV +A+I
Sbjct: 279 GC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAII 332
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+ Y+++GD G + + + K D V + ++ ++ G HGY ++ G
Sbjct: 333 SHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLI 392
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ +V++ + MYSK + +F+ M ++ + ++NSVI G + A F +
Sbjct: 393 IDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQM 452
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGR 427
G PD T ++LL ACC G ++ G
Sbjct: 453 TLSGYGPDSITLASLLSACCQNGNLHFGE 481
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 159/326 (48%), Gaps = 21/326 (6%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA-------------- 113
S+ ++S + Y F LF+ LLR ++KP++ T++ + +A
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
CSEN + + I G + S+A + YSKL + A ++FD + D+V
Sbjct: 74 CSENEKAEANQ-LQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N++ISG+ CG + +LF M R P + TLV L+ L G+ IHG +K
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ D V + LVSMY +C ++ +F + +V+W+ +I + Q G + +A+
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLV 252
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F+++ + A+ V + S+L+A A + IH Y + G +V V ++LV Y K
Sbjct: 253 FKQMLEESVNANSVTMVSILSANANT------GCIHCYATKIGLVENVSVVTSLVCSYVK 306
Query: 354 CGYLGLGIQVFETMSERNIITYNSVI 379
CGY+ L ++ + ++N++ ++I
Sbjct: 307 CGYIELAELIYMSKLKKNLVALTAII 332
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 60/102 (58%)
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+ + I+ GF+ + VS+A +D+YSK G++ ++F+ E++++++N++I G G
Sbjct: 85 LQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGN 144
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ AF+ F ++ + +P + T +L+ +C L G+ I
Sbjct: 145 SHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSI 186
>gi|147794059|emb|CAN66615.1| hypothetical protein VITISV_022030 [Vitis vinifera]
Length = 818
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 163/474 (34%), Positives = 252/474 (53%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S ++ +LH LV + L D A L+ +YA L AR LFD P+
Sbjct: 254 VLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLAMYAKCGHLFDARRLFDMMPKTD 313
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN +I Y ++A LF ++ +KPD+ T++ SE + L + +H
Sbjct: 314 LVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSITFSSFLPLLSEGATLRQGKEIHC 373
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I +G+ D SAL+ Y K ++ A K+FD + D+V+C +MISG+ G +
Sbjct: 374 YIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRTPVDIVVCTAMISGYVLNGMNNN 433
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L++F W+L+ + TL ++ + L++G+ +HG LK+ YV S ++
Sbjct: 434 ALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMD 493
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ A+ F + D V W+++IT SQ G +A+ FR++ M G K D V
Sbjct: 494 MYAKCGKLDLAHQTFIGISXKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVS 553
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I++ L+A A + G IH ++++ F + SAL+DMYSKCG L L +VF+ M
Sbjct: 554 ISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDMME 613
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E+N +++NS+I G HG + F ++ G+ PD TF A++ AC H G V++G
Sbjct: 614 EKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIH 673
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
F MTEE GI A+ EHY MV L G AG L EA+ I S+P D V G L
Sbjct: 674 YFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGLYL 727
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 113/421 (26%), Positives = 207/421 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ LS ++ HA + + + TKL+ +Y L A+ +F +
Sbjct: 52 ILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLRLWC 111
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN +IR + + +F+ A + +L PD +T+ + +AC + + R VH
Sbjct: 112 SEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHD 171
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G D S+L+ YS+ I +A +FD + D VL N M++G+ G WD
Sbjct: 172 KIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGDWDN 231
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +F M R P+ T ++S +++ G +HG + S + V++ L++
Sbjct: 232 ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTLLA 291
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A +F+ + DLVTW+ +I+GY Q G +A F ++ G K D +
Sbjct: 292 MYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAGMKPDSIT 351
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+S L ++ A + G IH Y+I++G L V + SAL+D+Y KC + + ++F+ +
Sbjct: 352 FSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAHKIFDQRT 411
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+I+ ++I G L+G A E FR ++++ + + T +++L AC + G+E
Sbjct: 412 PVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKE 471
Query: 429 I 429
+
Sbjct: 472 L 472
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 1/264 (0%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
LV ++ +PS LS G+ H L + + + L+ MY C A ++F L
Sbjct: 49 LVSILQTCTDPSGLSHGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQLR 108
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
W+ +I G++ G + AL ++ K+ G D V+ A +V G V
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+H + GFEL V V S+L+ YS+ G + +F+ M ++ + +N ++ G +G
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYVKNGD 228
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
A F ++ NP+ TF+ +L C ++N G ++ + G++ +
Sbjct: 229 WDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSS-GLEMDSPVAN 287
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPK 471
++ + G+L +A +PK
Sbjct: 288 TLLAMYAKCGHLFDARRLFDMMPK 311
>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
Length = 805
Score = 288 bits (736), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 176/592 (29%), Positives = 294/592 (49%), Gaps = 72/592 (12%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L +SL+ K++H+++ ++ D KLV LYA L R +FD +++
Sbjct: 105 VLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKN 164
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL---KPDN----FTYACITRACSENSDLP 121
V+LWN ++ YA F ++ LFK ++ + +P++ F C S NS +
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224
Query: 122 GL--------------------------------------------RFVHGGAIVSGLGR 137
G + VH AI S R
Sbjct: 225 GYVSNGLTERGLEIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFER 284
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S+ L+ YSK +D A++VF+ + + ++V SMI+G+ G D +++L M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQME 344
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G D ++ L G+ +H + ++ +S +V + L+ MY +C M+
Sbjct: 345 KEGVKLDVVATTSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYTKCGSMD 404
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+++ D+++W+ +I G+ K D +A +L A A
Sbjct: 405 GANSVFSTMVVKDIISWNTMI------GEL---------------KPDSRTMACILPACA 443
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G IHGY++++G+ V++ALVD+Y KCG LGL +F+ + ++++++
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G G+HG+ +A F ++ + G+ PDE +F ++L AC H GL+ G F M ++
Sbjct: 504 MISGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDF 563
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I+ K EHY MV LL GNL +AY FI +LP D + GALL C IY + +LAE V
Sbjct: 564 NIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRIYHDIELAEKV 623
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++FE +P Y V+L+N YAE +W++V ++R+ I GLRK G SW+
Sbjct: 624 AERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKIGKKGLRKNPGCSWI 675
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 86/199 (43%), Gaps = 28/199 (14%)
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN-----------MQGKKADPVLIA 310
+F+S P ++ + T Q DY + +F +L Q + + +
Sbjct: 45 IFSSCL-PIRISATPTRTIDRQVTDYNAKILHFCQLGNLENAMELVCMCQKSELETKTYS 103
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SVL A S ++ G +H + + + ++ LV +Y+ CG L G +VF+TM ++
Sbjct: 104 SVLQLCAGSKSLTDGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKK 163
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL----------------NPDESTFSALL 414
N+ +N ++ G ++ F+ ++EKG+ + D ++++++
Sbjct: 164 NVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMI 223
Query: 415 CACCHGGLVNDGREIFTRM 433
GL G EI+ +M
Sbjct: 224 SGYVSNGLTERGLEIYKQM 242
>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Glycine max]
Length = 820
Score = 287 bits (735), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 160/496 (32%), Positives = 260/496 (52%), Gaps = 2/496 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
+ SAR++FDK +++ W +I Y+ +DA LF LL ++ PD FT + A
Sbjct: 198 IQSARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSA 257
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C E + +H I SGL D LV Y+K + ++ + K+F+ + +++
Sbjct: 258 CVELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSW 317
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
++ISG+ ++++LF ML TP+ +T ++ +G+ +HG +K
Sbjct: 318 TALISGYVQSRQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIK 377
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ + V + L++MYAR M A FN LF +L++++ ++ D ++ +
Sbjct: 378 LGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNH 437
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
++ G A P A +L+ AA + G IH +++ GF ++ +++AL+ MYSK
Sbjct: 438 --EVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSK 495
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG +QVF M RN+IT+ S+I G HGF +A E F +++E G+ P+E T+ A+
Sbjct: 496 CGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAV 555
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV 473
L AC H GL+++ + F M + I + EHY MV LLG +G L EA FI S+P
Sbjct: 556 LSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPFDA 615
Query: 474 DPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
D V L C ++ N+ L E A ++ E +P A ++LSN YA +GRWDDV LR
Sbjct: 616 DALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAALRK 675
Query: 534 DIVDNGLRKEAGVSWV 549
+ L KE G SW+
Sbjct: 676 SMKQKKLIKETGYSWI 691
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 159/315 (50%), Gaps = 7/315 (2%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD--GVSD 167
+ +AC + +L + +H I SGL DS+ ++L+T YSK + A+ +F G
Sbjct: 45 LLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIFRNMGHHK 104
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT---PDEYTLVGLISGLWEPSLLSVG 224
DLV +++IS FA+ ++L F ML+ + P+EY L+ P + G
Sbjct: 105 RDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSNPLFFTTG 164
Query: 225 QGIHGFCLKSS-FDSYDYVSSVLVSMYARCNC-MNSAYHVFNSLFHPDLVTWSALITGYS 282
I F LK+ FDS+ V L+ M+ + + SA VF+ + H +LVTW+ +IT YS
Sbjct: 165 LAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQSARMVFDKMQHKNLVTWTLMITRYS 224
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q G A+ F +L + D + S+L+A + G +H +VI+ G V
Sbjct: 225 QLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACVELEFFSLGKQLHSWVIRSGLASDVF 284
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V LVDMY+K + ++F TM N++++ ++I G +A + F +++
Sbjct: 285 VGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQSRQEQEAIKLFCNMLHGH 344
Query: 403 LNPDESTFSALLCAC 417
+ P+ TFS++L AC
Sbjct: 345 VTPNCFTFSSVLKAC 359
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 174/347 (50%), Gaps = 5/347 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+LH+ V ++ L D F LV +YA + + ++R +F+ +V W ++I Y +
Sbjct: 268 KQLHSWVIRSGLASDVFVGCTLVDMYAKSAAVENSRKIFNTMLHHNVMSWTALISGYVQS 327
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A LF N+L + P+ FT++ + +AC+ D + +HG I GL +
Sbjct: 328 RQEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQTIKLGLSTINCVG 387
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y++ ++ A K F+ + + +L+ N+ A D+S +G +
Sbjct: 388 NSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESFNHEVEHTGVGAS 447
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P +T L+SG + G+ IH +KS F + +++ L+SMY++C +A V
Sbjct: 448 P--FTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQV 505
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN + + +++TW+++I+G+++ G KAL F ++ G K + V +VL+A + +
Sbjct: 506 FNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACSH-VGL 564
Query: 323 WPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETM 367
A H + + +S + + +VD+ + G L I+ +M
Sbjct: 565 IDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSM 611
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 20/266 (7%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+LH K L L+ +YA + + AR F+ ++++ +N+ A A A
Sbjct: 369 KQLHGQTIKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKA 428
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +S + T + FTYAC+ + + +H + SG G + +
Sbjct: 429 --LDSDESFNHEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCIN 486
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL++ YSK + A++VF+ + +++ S+ISGFA GF K+L+LF ML +G
Sbjct: 487 NALISMYSKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVK 546
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV---------LVSMYARC 253
P+E T + ++S L+ F+S Y S+ +V + R
Sbjct: 547 PNEVTYIAVLSACSHVGLIDEAW--------KHFNSMHYNHSISPRMEHYACMVDLLGRS 598
Query: 254 NCMNSAYHVFNSL-FHPDLVTWSALI 278
+ A NS+ F D + W +
Sbjct: 599 GLLLEAIEFINSMPFDADALVWRTFL 624
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 306 PVLIASVL-AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
P++ +S+L A +S N+ G ++H +I G L ++ ++L+ +YSKCG + +F
Sbjct: 38 PLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNSLITLYSKCGDWENALSIF 97
Query: 365 ETMS--ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN---PDESTFSALLCACCH 419
M +R++++++++I + +A F +++ N P+E F+ALL +C +
Sbjct: 98 RNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRNIIYPNEYCFTALLRSCSN 157
Query: 420 GGLVNDGREIF 430
G IF
Sbjct: 158 PLFFTTGLAIF 168
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++ + +++HAL+ K+ + L+ +Y+ +A +F+ R+V W SII
Sbjct: 463 TIVKGEQIHALIVKSGFGTNLCINNALISMYSKCGNKEAALQVFNDMGYRNVITWTSIIS 522
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+A A LF +L +KP+ TY + ACS
Sbjct: 523 GFAKHGFATKALELFYEMLEIGVKPNEVTYIAVLSACS 560
>gi|356499129|ref|XP_003518395.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 614
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 176/543 (32%), Positives = 280/543 (51%), Gaps = 7/543 (1%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK-TPQRSVF 70
L+K S +++H + S + P L + L N P + +LF P + +
Sbjct: 30 LAKQCSSTKTLQQVHTQMVVNSSIHTPNNHL-LSKAIHLKN-FPYSSLLFSHIAPHPNDY 87
Query: 71 LWNSIIRAYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
+N +IRA H + A SLF ++ L PDNFT+ +C+ + L H
Sbjct: 88 AFNIMIRALTTTWHNYPLALSLFHRMMSLSLTPDNFTFPFFFLSCANLASLSHACAAHSL 147
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
L D T+ +L+TAY++ L+ A KVFD + D V NSMI+G+A G ++
Sbjct: 148 LFKLALHSDPHTAHSLITAYARCGLVASARKVFDEIPHRDSVSWNSMIAGYAKAGCAREA 207
Query: 190 LQLFDWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++F M R G PDE +LV L+ E L +G+ + GF ++ Y+ S L+S
Sbjct: 208 VEVFREMGRRDGFEPDEMSLVSLLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALIS 267
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + SA +F+ + D++TW+A+I+GY+Q G +A+ F + A+ +
Sbjct: 268 MYAKCGELESARRIFDGMAARDVITWNAVISGYAQNGMADEAILLFHGMKEDCVTANKIT 327
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ +VL+A A + G I Y Q GF+ + V++AL+DMY+K G L +VF+ M
Sbjct: 328 LTAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMP 387
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK--GLNPDESTFSALLCACCHGGLVNDG 426
++N ++N++I L HG +A F+ + ++ G P++ TF LL AC H GLV++G
Sbjct: 388 QKNEASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSACVHAGLVDEG 447
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+F M+ +G+ K EHY MV LL AG+L EA+ I +P+ D GALL C
Sbjct: 448 YRLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIRKMPEKPDKVTLGALLGACR 507
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
N D+ E V + E DP ++ S YA W+D ++R + G+ K G
Sbjct: 508 SKKNVDIGERVMRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGC 567
Query: 547 SWV 549
SW+
Sbjct: 568 SWI 570
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 94/226 (41%), Gaps = 45/226 (19%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + +L K++ ++ D F AT L+ +YA + L +A+ +F PQ++
Sbjct: 331 VLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKSGSLDNAQRVFKDMPQKN 390
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRT--QLKPDNFTYACITRACSENSDLPGLRFV 126
WN++I A A + +A SLF+++ +P++ T+ + AC V
Sbjct: 391 EASWNAMISALAAHGKAKEALSLFQHMSDEGGGARPNDITFVGLLSAC-----------V 439
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-----PDLVLCNSMISGFA 181
H G L+DE ++FD +S P + + M+ A
Sbjct: 440 HAG------------------------LVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLA 475
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
G + +D + ++ + PD+ TL L+ + +G+ +
Sbjct: 476 RAGHL---YEAWDLIRKMPEKPDKVTLGALLGACRSKKNVDIGERV 518
>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
Length = 785
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 270/528 (51%), Gaps = 1/528 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+H+ L D F T LV YA +L A+ LF R V WN++I +L
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+DA L + + P++ T + E L + +HG + + +
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKT 202
L+ Y+K + A K+FD + + V ++MI G+ ++L+LFD M L+
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAMD 309
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TL ++ + + LS G+ +H + +K + + L+SMYA+C ++ A
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIRF 369
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D V++SA+++G Q G+ AL FR + + G D + VL A + A +
Sbjct: 370 FDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G HGY+I GF ++ +AL+DMYSKCG + +VF M +I+++N++I+G
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG +A F D++ GL PD+ TF LL +C H GLV +GR F M+ ++ I +
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EH I MV +LG AG ++EA+ FI ++P D + ALLS C I+ N +L E V+ ++
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
P V+LSN Y+ GRWDD +R D GL+K G SW+
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 657
Score = 232 bits (591), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 230/424 (54%), Gaps = 1/424 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + +LE +SL+ K++H K + D KL RLY N + AR LFD+
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P SV LWN IIRAYA F+ A L+ ++L ++P+ +TY + +ACS +
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H A + GL D +ALV Y+K ++ EA ++F +S D+V N+MI+G +
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G D ++QL M G P+ T+VG++ + E L G+ +HG+C++ SFD+ V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GK 302
+ L+ MYA+C C+ A +F+ + + V+WSA+I GY +AL F ++ ++
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILKDAM 308
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
PV + SVL A AK ++ G +H Y+I+ G L +++ + L+ MY+KCG + I+
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCGVIDDAIR 368
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
F+ M+ ++ +++++++ G +G A FR + G++PD +T +L AC H
Sbjct: 369 FFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAA 428
Query: 423 VNDG 426
+ G
Sbjct: 429 LQHG 432
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 192/402 (47%), Gaps = 10/402 (2%)
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
LR ++K + Y + AC ++ L + +H + + DS L Y + +
Sbjct: 3 LRXEVKNN---YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQV 59
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A ++FD + +P ++L N +I +A G +D ++ L+ ML LG P++YT ++
Sbjct: 60 VLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKAC 119
Query: 216 WEPSLLSVGQG--IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
LL++ G IH +S +V + LV YA+C + A +F+S+ H D+V
Sbjct: 120 --SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+A+I G S G A+ ++ +G + I VL ++ + G +HGY +
Sbjct: 178 WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV 237
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ F+ V+V + L+DMY+KC L ++F+ M RN ++++++I G +A E
Sbjct: 238 RRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALE 297
Query: 394 FFRDIIEK-GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
F +I K ++P T ++L AC ++ GR++ + + G ++ +
Sbjct: 298 LFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYII-KLGXVLDILLGNTLLSM 356
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
G +++A F + P D A++S C GN+ +A
Sbjct: 357 YAKCGVIDDAIRF-FDXMNPKDSVSFSAIVSGCVQNGNAAVA 397
>gi|147866113|emb|CAN78822.1| hypothetical protein VITISV_006669 [Vitis vinifera]
Length = 599
Score = 287 bits (735), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 174/534 (32%), Positives = 279/534 (52%), Gaps = 21/534 (3%)
Query: 34 LLRDPFYATKLVRLYALN---NVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKS 90
L+ D F +++L+ A++ ++ ILF+ T + F WN IR + + +A
Sbjct: 6 LIEDGFASSRLIAFCAISEWRDLDYCTNILFN-TRNPNTFSWNVAIRGFLDSENPREAVV 64
Query: 91 LFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY 149
L+K +L+ KPDN+TY + +AC+ S + + G + G D S+A++
Sbjct: 65 LYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSEILGHVLHLGFDSDIFVSNAVIHLL 124
Query: 150 SKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV 209
+D A K+FD DLV NSMI+G+ G+ ++L + M G PDE T++
Sbjct: 125 VSCGDLDGARKMFDKSCVRDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMI 184
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
G++S + L +G+ H + ++ +++ L+ MY +C + SA +F+S+ +
Sbjct: 185 GVVSSCAQLEDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNK 244
Query: 270 ----------------DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
D+V W+A+I GY +AL F ++ D V + S L
Sbjct: 245 TMVSWTTMLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCL 304
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+A ++ + G IH Y+ +H L+V + +AL+DMY+KCG + IQVF+ + RN +
Sbjct: 305 SACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSL 364
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
T+ ++I GL LHG + A +F ++I+ + PDE TF LL ACCHGGLV +GR+ F++M
Sbjct: 365 TWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQM 424
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+ ++ + K +HY MV LLG AG LEEA I S+P D V GAL C I+GN +
Sbjct: 425 SSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFACRIHGNVLM 484
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
E A +L + DP V+L+N Y E W + K R + G+ K G S
Sbjct: 485 GERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKXRKLMRQRGVEKTPGCS 538
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 113/283 (39%), Gaps = 26/283 (9%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARI----------------L 60
+ L +E H + + L A L+ +Y L SAR L
Sbjct: 194 EDLDLGRESHCYIEENGLKLTVPLANALMDMYMKCGNLESARKLFDSMTNKTMVSWTTML 253
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FD+ P + V WN++I Y A+R +A +LF + + PD T ACS+ L
Sbjct: 254 FDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPDEVTMVSCLSACSQLGAL 313
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
++H L + +AL+ Y+K I +AI+VF + + + ++ISG
Sbjct: 314 DVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQELPGRNSLTWTAIISGL 373
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSS 235
A G ++ F M+ PDE T +GL+S GL E Q F L
Sbjct: 374 ALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEEGRKYFSQMSSKFNLSPK 433
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSAL 277
Y S +V + R + A + S+ D V W AL
Sbjct: 434 LKHY----SCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGAL 472
>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 810
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 276/527 (52%), Gaps = 1/527 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L K L D LV +Y+ L A++LFDK +++ WN++I
Sbjct: 156 IHGLAVKLGLSEDVRVNNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGY 215
Query: 85 FNDAKSLFKNL-LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A +LF+ + ++ ++ + T I AC E S L L+ +HG +I G D + ++
Sbjct: 216 IFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVAN 275
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
V AY+K ++ A +VF + + N++I G A G K+L L+ M G P
Sbjct: 276 GFVAAYAKCGMLICAERVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVP 335
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D +T+ L+ L G+ +HGF L+ + ++ L+S+Y C +SA +F
Sbjct: 336 DWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLF 395
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + V+W+A+I+GYSQ G AL FRKL G + + + SVL A ++ + +
Sbjct: 396 DGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALR 455
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G H Y ++ V V+ + +DMY+K G + VF+ + +++ ++N++I G
Sbjct: 456 LGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKDLASWNAIIAAYG 515
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+HG ++ E F + + G PD TF +L C H GLV +G + F M +GI+ K
Sbjct: 516 VHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKL 575
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY ++ +LG AG L++A + +P+ D V +LLS C +G ++ +IVA +L E
Sbjct: 576 EHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWSSLLSFCRNFGELEIGQIVAEKLLE 635
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+P+ V LSN YA GRWDDV ++R I D GL+K+AG SW+
Sbjct: 636 LEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIGLQKDAGCSWIE 682
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 126/476 (26%), Positives = 232/476 (48%), Gaps = 15/476 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H +V K LL D F L+ +Y + +A +F P R++ WNSII ++
Sbjct: 53 IHGMVIKMGLLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGF 112
Query: 85 FNDAKSLFKNLLRTQ--LKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGRDSIT 141
D + ++ + L PD T + C+ D+ G+R +HG A+ GL D
Sbjct: 113 SKDCFDMLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIR-IHGLAVKLGLSEDVRV 171
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLG 200
+++LV YSK + EA +FD + + V N+MI G G+ ++ LF M ++
Sbjct: 172 NNSLVDMYSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQED 231
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+E T++ ++ E S L + +HG+ ++ F + V++ V+ YA+C + A
Sbjct: 232 IEVNEVTVLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAE 291
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF S+ + +W+ALI G +Q GD KAL + ++ G D I S+L A+A
Sbjct: 292 RVFYSMETKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLK 351
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G +HG+V++HG E+ + +L+ +Y CG +F+ M E++ +++N++I
Sbjct: 352 SLRYGKEVHGFVLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMIS 411
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +G A FR ++ G P + ++L AC + G+E T Y ++
Sbjct: 412 GYSQNGLPEDALILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKE-----THCYALK 466
Query: 441 AKTEHYIYM----VKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
A +++ + + +G ++E+ S L K D A A+++ ++G+ +
Sbjct: 467 ALLMEDVFVACSTIDMYAKSGCIKESRSVFDGL-KNKDLASWNAIIAAYGVHGDGE 521
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 182/361 (50%), Gaps = 13/361 (3%)
Query: 79 YALAHR---FNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+ HR ++DA +F L+ T+ DNFT+ C+ +AC+ + D +HG I G
Sbjct: 2 HVAVHRNELYSDAIDMFVKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMG 61
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L D +AL+ Y K +D A+KVF + +LV NS+ISGF+ GF S FD
Sbjct: 62 LLLDVFVGNALIAMYGKFGFVDAAVKVFHYMPVRNLVSWNSIISGFSENGF---SKDCFD 118
Query: 195 WMLRL-----GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
++ + G PD TLV ++ + +G IHG +K V++ LV M
Sbjct: 119 MLVEMMAGEEGLLPDIATLVTVLPVCAREVDVQMGIRIHGLAVKLGLSEDVRVNNSLVDM 178
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVL 308
Y++C + A +F+ + V+W+ +I G +G +A FR++ MQ + + V
Sbjct: 179 YSKCGYLTEAQMLFDKNNRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVT 238
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ ++L A + + + +HGY I+HGF+ +V++ V Y+KCG L +VF +M
Sbjct: 239 VLNILPACLEISQLRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSME 298
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ + ++N++I G +G +A + + GL PD T +LL A H + G+E
Sbjct: 299 TKTVNSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKE 358
Query: 429 I 429
+
Sbjct: 359 V 359
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 162/362 (44%), Gaps = 5/362 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
LE+S+ L KELH + D A V YA +L A +F ++V
Sbjct: 247 LEISQ----LRSLKELHGYSIRHGFQYDELVANGFVAAYAKCGMLICAERVFYSMETKTV 302
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WN++I A A +L+ + + L PD FT + A + L + VHG
Sbjct: 303 NSWNALIGGCAQNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGF 362
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ GL DS +L++ Y A +FDG+ + V N+MISG++ G + +
Sbjct: 363 VLRHGLEIDSFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDA 422
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L LF ++ G P + +V ++ + S L +G+ H + LK+ +V+ + M
Sbjct: 423 LILFRKLVSDGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDM 482
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+ C+ + VF+ L + DL +W+A+I Y GD +++ F ++ G+ D
Sbjct: 483 YAKSGCIKESRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTF 542
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+L + + V G + HG E + + ++DM + G L +++ M
Sbjct: 543 IGILTVCSHAGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMP 602
Query: 369 ER 370
E+
Sbjct: 603 EQ 604
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 11/127 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L KE H KA L+ D F A + +YA + + +R +FD +
Sbjct: 444 VLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKESRSVFDGLKNKD 503
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+II AY + ++ LF+ + + PD FT+ I CS H
Sbjct: 504 LASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCS-----------HA 552
Query: 129 GAIVSGL 135
G + GL
Sbjct: 553 GLVEEGL 559
>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 850
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 279/574 (48%), Gaps = 48/574 (8%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
HAL + + F LV +Y+ L AR +FD+ P V WNSII +YA +
Sbjct: 150 HALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKP 209
Query: 86 NDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +F + +PD+ T + C+ + HG A+ S + ++ +
Sbjct: 210 KMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNC 269
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD---------- 194
LV Y+K ++DEA VF + D+V N+M++G++ G ++ +++LF+
Sbjct: 270 LVDMYAKFGMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMD 329
Query: 195 ---W----------------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
W ML G P+E TL+ ++SG L G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 230 FCLKSSFD-------SYDYVSSVLVSMYARCNCMNSAYHVFNSLF--HPDLVTWSALITG 280
+ +K D + V + L+ MYA+C ++ A +F+SL D+VTW+ +I G
Sbjct: 390 YAIKYPMDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGG 449
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
YSQ GD KAL ++ + + P I+ L A A A + G IH Y +++
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRNQQN 509
Query: 339 -LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ + VS+ L+DMY+KCG +G VF+ M E+N +T+ S++ G G+HG+ +A F +
Sbjct: 510 AVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEE 569
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ G D T +L AC H G+++ G E F RM ++G+ EHY +V LLG AG
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAG 629
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L A I +P P V ALLSCC I+G +L E A ++ E +LSN
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSN 689
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
YA GRW DV ++R + G++K G SWV G
Sbjct: 690 MYANAGRWKDVTRIRSLMRHKGIKKRPGCSWVEG 723
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 212/462 (45%), Gaps = 50/462 (10%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP--QRSVFLWNS 74
+++S+ K +H + +L + L+ Y L A L + P V+ WNS
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNL-TSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+IR+Y R N S F + PDN+T+ + +AC E S + H + V+G
Sbjct: 98 LIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG 157
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ +ALV YS+ + +A KVFD + D+V NS+I +A G +L++F
Sbjct: 158 FMSNVFVGNALVAMYSRCGSLSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFS 217
Query: 195 WML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M G PD+ TLV ++ S+G+ HGF + S +V + LV MYA+
Sbjct: 218 KMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKF 277
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ------------- 300
M+ A VF+++ D+V+W+A++ GYSQ G + A+ F ++ +
Sbjct: 278 GMMDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQEEKIKMDVVTWSAAI 337
Query: 301 ----------------------GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
G K + V + SVL+ A + G IH Y I++ +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPMD 397
Query: 339 LSV-------MVSSALVDMYSKCGYLGLGIQVFETMS--ERNIITYNSVILGLGLHGFTY 389
L MV + L+DMY+KC + + +F+++S ER+++T+ +I G HG
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 390 QAFEFFRDIIEKGLN--PDESTFSALLCACCHGGLVNDGREI 429
+A E ++ E+ P+ T S L AC ++ G++I
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQI 499
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATK-LVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+LS K++HA + P + + L+ +YA + AR++FD +++ W S++
Sbjct: 492 ALSIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLM 551
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
Y + +A +F+ + R K D T + ACS +
Sbjct: 552 TGYGMHGYGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHS 592
>gi|356544545|ref|XP_003540710.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Glycine max]
Length = 705
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/601 (30%), Positives = 284/601 (47%), Gaps = 69/601 (11%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL---------- 71
+ +HA + K + F +LV Y AR +FD+ PQR+ F
Sbjct: 38 ARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVFDRMPQRNTFSYNAVLSVLTK 97
Query: 72 ---------------------WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI 110
WN+++ +A RF +A F ++ + +++
Sbjct: 98 FGKLDEAFNVFKSMPEPDQCSWNAMVSGFAQHDRFEEALRFFVDMHSEDFVLNEYSFGSA 157
Query: 111 TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDL 170
AC+ +DL +H S D SALV YSK ++ A + FDG++ ++
Sbjct: 158 LSACAGLTDLNMGIQIHALISKSRYLLDVYMGSALVDMYSKCGVVACAQRAFDGMAVRNI 217
Query: 171 VLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
V NS+I+ + G K+L++F M+ G PDE TL ++S S + G IH
Sbjct: 218 VSWNSLITCYEQNGPAGKALEVFVMMMDNGVEPDEITLASVVSACASWSAIREGLQIHAR 277
Query: 231 CLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFN------------------------- 264
+K D V + LV MYA+C +N A VF+
Sbjct: 278 VVKRDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRNVVSETSMVCGYARAASVKA 337
Query: 265 ------SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
++ ++V+W+ALI GY+Q G+ +A+ F L + ++L A A
Sbjct: 338 ARLMFSNMMEKNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397
Query: 319 SANVWPGAVIHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
A++ G H +++HGF E + V ++L+DMY KCG + G VFE M ER++
Sbjct: 398 LADLKLGRQAHTQILKHGFWFQSGEESDIFVGNSLIDMYMKCGMVEDGCLVFERMVERDV 457
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++N++I+G +G+ A E FR ++ G PD T +L AC H GLV +GR F
Sbjct: 458 VSWNAMIVGYAQNGYGTNALEIFRKMLVSGQKPDHVTMIGVLSACSHAGLVEEGRRYFHS 517
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
M E G+ +H+ MV LLG AG L+EA I ++P D V G+LL+ C ++GN +
Sbjct: 518 MRTELGLAPMKDHFTCMVDLLGRAGCLDEANDLIQTMPMQPDNVVWGSLLAACKVHGNIE 577
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
L + VA +L E DP V+LSN YAE GRW DV+++R + G+ K+ G SW+
Sbjct: 578 LGKYVAEKLMEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQRGVIKQPGCSWIEIQ 637
Query: 553 S 553
S
Sbjct: 638 S 638
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 4/132 (3%)
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D A +L + +S + IH +I+ F + + + LVD Y KCGY +VF
Sbjct: 18 DSSPFAKLLDSCVRSKSGIDARRIHARIIKTQFSSEIFIQNRLVDAYGKCGYFEDARKVF 77
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ M +RN +YN+V+ L G +AF F+ + E PD+ +++A++
Sbjct: 78 DRMPQRNTFSYNAVLSVLTKFGKLDEAFNVFKSMPE----PDQCSWNAMVSGFAQHDRFE 133
Query: 425 DGREIFTRMTEE 436
+ F M E
Sbjct: 134 EALRFFVDMHSE 145
>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 760
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/601 (29%), Positives = 288/601 (47%), Gaps = 72/601 (11%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+T + HA + K+ D + + KL+ Y+ N A ++ P +V+ ++S+I A
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLILQSIPDPTVYSFSSLIYALT 92
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A F+ + +F + L PD + + C+E S + +H A VSGL D+
Sbjct: 93 KAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAF 152
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC--------------------------- 173
+L Y + + +A KVFD +S+ D+V C
Sbjct: 153 VQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSG 212
Query: 174 --------NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
N ++SGF G+ +++ +F M LG PD+ T+ ++ + + L++G+
Sbjct: 213 IEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGR 272
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYAR---------------------CNC--------- 255
IHG+ +K V S ++ MY + CN
Sbjct: 273 QIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNG 332
Query: 256 -MNSAYHVFNSLFHP-----DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
++ A +F LF ++V+W+++I G +Q G +AL FR++ + G K + V I
Sbjct: 333 LVDKALEMF-GLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
S+L A A + G HG+ ++ V V SAL+DMY+KCG + + VF M
Sbjct: 392 PSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPT 451
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+N++ +NS++ G +HG + F ++ L PD +F++LL AC GL ++G +
Sbjct: 452 KNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKY 511
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M+EEYGI+ + EHY MV LLG AG L+EAY I +P D V GALL+ C +
Sbjct: 512 FNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEIPFEPDSCVWGALLNSCRLQN 571
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N DLAEI A +LF +P V++SN YA G W +V +R+ + GL+K G SW+
Sbjct: 572 NVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWI 631
Query: 550 S 550
Sbjct: 632 Q 632
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 55/99 (55%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + H + LL D + L+ +YA + ++I+F+ P +++ WNS++
Sbjct: 403 ALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMN 462
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
Y++ + + S+F++L+RT+LKPD ++ + AC +
Sbjct: 463 GYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
chloroplastic [Vitis vinifera]
gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
Length = 880
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 295/544 (54%), Gaps = 1/544 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
F+ L + S L+ K +HA + + + T LV +Y + A + T +
Sbjct: 220 FVKLLAASSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDAVKVSKLTLE 279
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
VFLW +II + + +F +A + F + + + P+NFTY+ I ACS L + +
Sbjct: 280 YDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQI 339
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLS-LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
H +++GL D ++LV Y K S +I++A++ F G++ P+++ S+I+GF+ G
Sbjct: 340 HSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGL 399
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++S+++F M +G P+ +TL ++ L+ + +HG+ +K++ D+ V +
Sbjct: 400 EEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNA 459
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV YA ++ A+HV + + H D++T+++L T +Q G++ AL +N + D
Sbjct: 460 LVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMD 519
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+AS L+AAA + G +H Y ++ G + VS+ LVD+Y KCG + + F
Sbjct: 520 GFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDAHRSFL 579
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
++E + +++N +I GL +G A F D+ G+ PD+ T +L AC HGGLV+
Sbjct: 580 EITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLVLYACSHGGLVDM 639
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G + F M E++GI+ + +HY+ +V LLG AG LEEA + I ++P D + LL C
Sbjct: 640 GLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKPDALIYKTLLGAC 699
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++GN L E +A Q E DP A+ V+L+N Y + GR + K R + + G+RK G
Sbjct: 700 KLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRRMMRERGVRKNPG 759
Query: 546 VSWV 549
SW+
Sbjct: 760 QSWM 763
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 238/499 (47%), Gaps = 22/499 (4%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H+ + K D F + L+ LY + AR LFD+ P R V W ++ AY
Sbjct: 37 IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGRDS--IT 141
+A LF ++L + P+ FT + R+CS + G RF A+V+ G DS +
Sbjct: 97 HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRF---QALVTKSGFDSNPVL 153
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
SAL+ YSK EA +VF+ +++ D+V M+S F G W ++LQL+ M++ G
Sbjct: 154 GSALIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGV 213
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQG--IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
P+E+T V L++ S L + G +H + + + + LV MY +C + A
Sbjct: 214 APNEFTFVKLLAA---SSFLGLNYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDA 270
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
V D+ W+A+I+G++Q + +A+ F ++ G + + +L A +
Sbjct: 271 VKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSI 330
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC-GYLGLGIQVFETMSERNIITYNSV 378
+ G IH V+ G E V V ++LVDMY KC + ++ F ++ N+I++ S+
Sbjct: 331 LALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCSNMIEDAVRAFRGIASPNVISWTSL 390
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G HG ++ + F + G+ P+ T S +L AC G + + TR Y
Sbjct: 391 IAGFSEHGLEEESIKVFGAMQGVGVRPNSFTLSTILGAC---GTIKSLTQ--TRKLHGYI 445
Query: 439 IQAKTEHYIYMVKLLGLA----GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
I+ ++ + + L A G +++A+ + S+ K D +L + + GN ++A
Sbjct: 446 IKNNADNDVVVGNALVDAYAGLGMVDDAW-HVTSMMKHRDVITYTSLATRINQTGNHEMA 504
Query: 495 EIVAHQLFENDPRKGAYKV 513
+ + ++D R + +
Sbjct: 505 LNIITHMNKDDVRMDGFSL 523
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 114/230 (49%), Gaps = 2/230 (0%)
Query: 195 WMLRLGKTPD--EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
W + K P EY+L+ I + G IH +K F ++S+ L+S+Y +
Sbjct: 3 WRTTVSKIPSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGK 62
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C + A +F+ + D+ +W+ L++ Y + G++ +AL F + + G+ + +++
Sbjct: 63 CFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTA 122
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L + + G V + GF+ + ++ SAL+D YSKCG +VFE M+ +I
Sbjct: 123 LRSCSALREFNHGTRFQALVTKSGFDSNPVLGSALIDFYSKCGCTQEAYRVFEYMNNGDI 182
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+++ ++ G QA + + +I+ G+ P+E TF LL A GL
Sbjct: 183 VSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL 232
>gi|356545955|ref|XP_003541398.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Glycine max]
Length = 667
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 178/579 (30%), Positives = 292/579 (50%), Gaps = 36/579 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+ H+ L + K+LHA + S+ D F A+KL+ Y+ +N AR +FD TP R+
Sbjct: 41 LQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSKSNHAHFARKVFDTTPHRNT 100
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNL---LRTQLKPDNFTYACITRACSENSDLPGL-RF 125
F WN+++ Y+ F A +LF + PDNFT +C+ +A + + P L +
Sbjct: 101 FTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTISCVLKALASSFCSPELAKE 160
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH + GL D +AL+T Y + + A VFDG+S+ D+V N+MI G++
Sbjct: 161 VHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFDGMSERDIVTWNAMIGGYSQRRL 220
Query: 186 WDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+D+ +L+ ML + P+ T V ++ + L+ G +H F +S + +S+
Sbjct: 221 YDECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLAFGMELHRFVKESGIEIDVSLSN 280
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL------- 297
+V+MYA+C ++ A +F + D VT+ A+I+GY G A+ FR +
Sbjct: 281 AVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMDYGLVDDAMGVFRGVENPGLNM 340
Query: 298 ----------------------NMQGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVI 333
MQG P V +AS+L + + +N+ G +HGY I
Sbjct: 341 WNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLASILPSFSYFSNLRGGKEVHGYAI 400
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ G+E +V VS++++D Y K G + VF+ R++I + S+I HG A
Sbjct: 401 RRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRSLIIWTSIISAYAAHGDAGLALG 460
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
+ +++KG+ PD T +++L AC H GLV++ IF M +YGIQ EHY MV +L
Sbjct: 461 LYAQMLDKGIRPDPVTLTSVLTACAHSGLVDEAWNIFNSMPSKYGIQPLVEHYACMVGVL 520
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
AG L EA FI +P V G LL ++G+ ++ + LFE +P +
Sbjct: 521 SRAGKLSEAVQFISEMPIEPSAKVWGPLLHGASVFGDVEIGKFACDHLFEIEPENTGNYI 580
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
+++N YA G+W+ ++R+ + GL+K G SW+ S
Sbjct: 581 IMANLYAHAGKWEQAGEVRERMKVIGLQKIRGSSWIETS 619
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 194/419 (46%), Gaps = 41/419 (9%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + ++ L+ S S KE+H L+ + L D F L+ Y + + AR +FD
Sbjct: 139 FTISCVLKALASSFCSPELAKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFD 198
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLP 121
+R + WN++I Y+ +++ K L+ +L + + P+ T + +AC ++ DL
Sbjct: 199 GMSERDIVTWNAMIGGYSQRRLYDECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLA 258
Query: 122 -GL---RFVHGG-------------AIVSGLGR--------------DSITSSALVTAYS 150
G+ RFV A+ + GR D +T A+++ Y
Sbjct: 259 FGMELHRFVKESGIEIDVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYM 318
Query: 151 KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
L+D+A+ VF GV +P L + N++ISG ++ L M G +P+ TL
Sbjct: 319 DYGLVDDAMGVFRGVENPGLNMWNAVISGMVQNKQFEGVFDLVRQMQGSGLSPNAVTLAS 378
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++ S L G+ +HG+ ++ ++ YVS+ ++ Y + C+ A VF+
Sbjct: 379 ILPSFSYFSNLRGGKEVHGYAIRRGYEQNVYVSTSIIDAYGKLGCICGARWVFDLSQSRS 438
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV---WPGAV 327
L+ W+++I+ Y+ GD G AL + ++ +G + DPV + SVL A A S V W +
Sbjct: 439 LIIWTSIISAYAAHGDAGLALGLYAQMLDKGIRPDPVTLTSVLTACAHSGLVDEAW--NI 496
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
+ ++G + V + +V + S+ G L +Q M I ++ + G LHG
Sbjct: 497 FNSMPSKYGIQPLVEHYACMVGVLSRAGKLSEAVQFISEMP----IEPSAKVWGPLLHG 551
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 162/330 (49%), Gaps = 14/330 (4%)
Query: 96 LRTQLKPDNFTYACITRA---CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL 152
LR +L P +A A CS++ L + +H I+ + D+ +S L+ YSK
Sbjct: 23 LRRRLSPPGVDFAAYGSALQHCSDHRLLRQGKQLHARLILLSVTPDNFLASKLILFYSKS 82
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF---DWMLRLGKTPDEYT-- 207
+ A KVFD + N+M+ G++ + +L LF + +PD +T
Sbjct: 83 NHAHFARKVFDTTPHRNTFTWNAMLLGYSFNSMFRHALNLFGSFTFSTTPNASPDNFTIS 142
Query: 208 --LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
L L S P L + +H L+ S +V + L++ Y RC+ + A HVF+
Sbjct: 143 CVLKALASSFCSPEL---AKEVHCLILRRGLYSDIFVLNALITCYCRCDEVWLARHVFDG 199
Query: 266 LFHPDLVTWSALITGYSQQGDYGKA-LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+VTW+A+I GYSQ+ Y + Y LN+ + V SV+ A +S ++
Sbjct: 200 MSERDIVTWNAMIGGYSQRRLYDECKRLYLEMLNVSAVAPNVVTAVSVMQACGQSMDLAF 259
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H +V + G E+ V +S+A+V MY+KCG L ++FE M E++ +TY ++I G
Sbjct: 260 GMELHRFVKESGIEIDVSLSNAVVAMYAKCGRLDYAREMFEGMREKDEVTYGAIISGYMD 319
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+G A FR + GLN + S ++
Sbjct: 320 YGLVDDAMGVFRGVENPGLNMWNAVISGMV 349
>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
[Vitis vinifera]
Length = 785
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 270/528 (51%), Gaps = 1/528 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+H+ L D F T LV YA +L A+ LF R V WN++I +L
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+DA L + + P++ T + E L + +HG + + +
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVGT 249
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKT 202
L+ Y+K + A K+FD + + V ++MI G+ ++L+LFD M L+
Sbjct: 250 GLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAMD 309
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TL ++ + + LS G+ +H + +K + + L+SMYA+C ++ A
Sbjct: 310 PTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIRF 369
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D V++SA+++G Q G+ AL FR + + G D + VL A + A +
Sbjct: 370 FDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAAL 429
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G HGY+I GF ++ +AL+DMYSKCG + +VF M +I+++N++I+G
Sbjct: 430 QHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVSWNAMIIGY 489
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG +A F D++ GL PD+ TF LL +C H GLV +GR F M+ ++ I +
Sbjct: 490 GIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMSRDFSIVPR 549
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EH I MV +LG AG ++EA+ FI ++P D + ALLS C I+ N +L E V+ ++
Sbjct: 550 MEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELGEEVSKKIQ 609
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
P V+LSN Y+ GRWDD +R D GL+K G SW+
Sbjct: 610 SLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIE 657
Score = 231 bits (589), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 137/424 (32%), Positives = 230/424 (54%), Gaps = 1/424 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + +LE +SL+ K++H K + D KL RLY N + AR LFD+
Sbjct: 9 NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P SV LWN IIRAYA F+ A L+ ++L ++P+ +TY + +ACS +
Sbjct: 69 IPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H A + GL D +ALV Y+K ++ EA ++F +S D+V N+MI+G +
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLY 188
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G D ++QL M G P+ T+VG++ + E L G+ +HG+C++ SFD+ V
Sbjct: 189 GLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGVVVG 248
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GK 302
+ L+ MYA+C C+ A +F+ + + V+WSA+I GY +AL F ++ ++
Sbjct: 249 TGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILKDAM 308
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
PV + SVL A AK ++ G +H Y+I+ G L +++ + L+ MY+KCG + I+
Sbjct: 309 DPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCGVIDDAIR 368
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
F+ M+ ++ +++++++ G +G A FR + G++PD +T +L AC H
Sbjct: 369 FFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLPACSHLAA 428
Query: 423 VNDG 426
+ G
Sbjct: 429 LQHG 432
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 192/402 (47%), Gaps = 10/402 (2%)
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
LR ++K + Y + AC ++ L + +H + + DS L Y + +
Sbjct: 3 LRFEVKNN---YLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQV 59
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A ++FD + +P ++L N +I +A G +D ++ L+ ML LG P++YT ++
Sbjct: 60 VLARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKAC 119
Query: 216 WEPSLLSVGQG--IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
LL++ G IH +S +V + LV YA+C + A +F+S+ H D+V
Sbjct: 120 --SGLLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVA 177
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+A+I G S G A+ ++ +G + I VL ++ + G +HGY +
Sbjct: 178 WNAMIAGCSLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCV 237
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ F+ V+V + L+DMY+KC L ++F+ M RN ++++++I G +A E
Sbjct: 238 RRSFDNGVVVGTGLLDMYAKCQCLLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALE 297
Query: 394 FFRDIIEK-GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
F +I K ++P T ++L AC ++ GR++ + + G ++ +
Sbjct: 298 LFDQMILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYII-KLGSVLDILLGNTLLSM 356
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
G +++A F + P D A++S C GN+ +A
Sbjct: 357 YAKCGVIDDAIRFFDEM-NPKDSVSFSAIVSGCVQNGNAAVA 397
>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
Length = 1161
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 267/495 (53%), Gaps = 4/495 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+FD P+R+V W++++ + L + SLF + R + P+ FT++ +AC +
Sbjct: 434 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 493
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L +HG + G ++LV YSK I+EA KVF + D L+ N+MI+G
Sbjct: 494 LEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAG 553
Query: 180 FAHCGFWDKSLQLFDWMLR--LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
F H G+ K+L F M + + PDE+TL L+ ++ G+ IHGF ++S F
Sbjct: 554 FVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFH 613
Query: 238 --SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
S ++ LV +Y +C + SA F+ + +++WS+LI GY+Q+G++ +A+ F+
Sbjct: 614 CPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFK 673
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+L + D ++S++ A A + G + ++ L V +++VDMY KCG
Sbjct: 674 RLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCG 733
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + F M +++I++ VI G G HG ++ F +++ + PDE + A+L
Sbjct: 734 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 793
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H G++ +G E+F+++ E +GI+ + EHY +V LLG AG L+EA I ++P +
Sbjct: 794 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 853
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ LLS C ++G+ +L + V L D + A VM+SN Y + G W++ R+
Sbjct: 854 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 913
Query: 536 VDNGLRKEAGVSWVS 550
GL+KEAG+SWV
Sbjct: 914 NIKGLKKEAGMSWVE 928
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 155/295 (52%), Gaps = 6/295 (2%)
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
ITS+ L+ Y K A KVFD + + ++V ++++SG G SL LF M R
Sbjct: 413 ITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQ 472
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P+E+T + + L G IHGFCLK F+ V + LV MY++C +N A
Sbjct: 473 GIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEA 532
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF---RKLNMQGKKADPVLIASVLAAA 316
VF + L++W+A+I G+ G KAL F ++ N++ ++ D + S+L A
Sbjct: 533 EKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIK-ERPDEFTLTSLLKAC 591
Query: 317 AKSANVWPGAVIHGYVIQHGFEL--SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+ + ++ G IHG++++ GF S ++ +LVD+Y KCGYL + F+ + E+ +I+
Sbjct: 592 SSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS 651
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++S+ILG G +A F+ + E D S+++ L+ G+++
Sbjct: 652 WSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQM 706
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 127/275 (46%), Gaps = 18/275 (6%)
Query: 23 KELHALVAKASLLRDPFYAT---KLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
K++H + ++ P AT LV LY L SAR FD+ ++++ W+S+I Y
Sbjct: 601 KQIHGFLVRSGF-HCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGY 659
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A F +A LFK L + D+F + I ++ + L + + A+ G ++
Sbjct: 660 AQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLET 719
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+++V Y K L+DEA K F + D++ +I+G+ G KS+++F MLR
Sbjct: 720 SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRH 779
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGI-------HGFCLKSSFDSYDYVSSVLVSMYAR 252
PDE + ++S ++ G+ + HG +K + Y + +V + R
Sbjct: 780 NIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG--IKPRVEHY----ACVVDLLGR 833
Query: 253 CNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
+ A H+ +++ P++ W L++ GD
Sbjct: 834 AGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGD 868
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
L+++ S+ L+DMY KC + +VF++M ERN++++++++ G L+G + F ++
Sbjct: 410 LNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469
Query: 399 IEKGLNPDESTFSALLCACCHGGLVN 424
+G+ P+E TFS L AC GL+N
Sbjct: 470 GRQGIYPNEFTFSTNLKAC---GLLN 492
>gi|356567222|ref|XP_003551820.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g39620-like [Glycine max]
Length = 887
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 162/534 (30%), Positives = 277/534 (51%), Gaps = 1/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L + KE+H + + D AT +V +YA L A+ F R + +W++ +
Sbjct: 342 RDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFL 401
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A A +A S+F+ + LKPD + + AC+E S + +H I + +G
Sbjct: 402 SALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMG 461
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D ++ LV+ Y++ A+ +F+ + D+V N++I+GF CG +L++F +
Sbjct: 462 SDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRL 521
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G PD T+V L+S L +G HG +K+ +S +V L+ MYA+C +
Sbjct: 522 QLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSL 581
Query: 257 NSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+A ++F+ H D V+W+ +I GY G +A+ F ++ ++ + + V ++L A
Sbjct: 582 CTAENLFHLNKHVKDEVSWNVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPA 641
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ + + H +I+ GF S ++ ++L+DMY+K G L + F M + I++
Sbjct: 642 VSYLSILREAMAFHACIIRMGFISSTLIGNSLIDMYAKSGQLSYSEKCFHEMENKGTISW 701
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N+++ G +HG A F + E + D ++ ++L AC H GL+ +GR IF MTE
Sbjct: 702 NAMLSGYAMHGQGEVALALFSLMQETHVPVDSVSYISVLSACRHAGLIQEGRNIFQSMTE 761
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
++ ++ EHY MV LLG AG +E I +P D V GALL C ++ N L E
Sbjct: 762 KHNLEPSMEHYACMVDLLGCAGLFDEVLCLIDKMPTEPDAQVWGALLGACKMHSNVKLGE 821
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
I H L + +PR + ++LS+ YA+ GRW D + R ++ D+GL+K G SWV
Sbjct: 822 IALHHLLKLEPRNAVHYIVLSDIYAQCGRWIDARRTRSNMTDHGLKKNPGYSWV 875
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/416 (27%), Positives = 209/416 (50%), Gaps = 14/416 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H +A L D F T LV +Y L +AR +FDK P + V WN++I + +
Sbjct: 149 IHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFDKMPGKDVASWNAMISGLSQSSN 208
Query: 85 FNDAKSLFKNL-LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A +F+ + + ++PD+ + + A S D+ + +HG + + + S+
Sbjct: 209 PCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVDSCKSIHGYVVRRCVF--GVVSN 266
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+ YSK + A ++FD + D + +M++G+ H G + + LQL D M R
Sbjct: 267 SLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYVHHGCYFEVLQLLDEMKRKHIKM 326
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
++ ++V + E L G+ +H + L+ S V++ +VSMYA+C + A F
Sbjct: 327 NKISVVNSVLAATETRDLEKGKEVHNYALQLGMTSDIVVATPIVSMYAKCGELKKAKEFF 386
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
SL DLV WSA ++ Q G G+AL F+++ +G K D +++S+++A A+ ++
Sbjct: 387 LSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEMQHEGLKPDKTILSSLVSACAEISSSR 446
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H YVI+ + V++ LV MY++C + +F M ++++ +N++I G
Sbjct: 447 LGKMMHCYVIKADMGSDISVATTLVSMYTRCKSFMYAMTLFNRMHYKDVVAWNTLINGFT 506
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC-----------HGGLVNDGRE 428
G A E F + G+ PD T +LL AC HG ++ +G E
Sbjct: 507 KCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSACALLDDLYLGICFHGNIIKNGIE 562
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 199/385 (51%), Gaps = 4/385 (1%)
Query: 34 LLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFK 93
LLR Y L++++A ++ + + S+ LWNS+IRAY+ H F +A ++
Sbjct: 58 LLRSCKYLNPLLQIHA-RLIVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQ 116
Query: 94 NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
+ L+PD +T+ + +AC+ D +H L D + LV Y K+
Sbjct: 117 TMSYMGLEPDKYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMG 176
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGLI 212
+D A KVFD + D+ N+MISG + ++L++F M + G PD +++ L
Sbjct: 177 HLDNARKVFDKMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLA 236
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+ + + IHG+ ++ + VS+ L+ MY++C + A+ +F+ ++ D +
Sbjct: 237 PAVSRLEDVDSCKSIHGYVVRRCV--FGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDI 294
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W+ ++ GY G Y + L ++ + K + + + + + AA ++ ++ G +H Y
Sbjct: 295 SWATMMAGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYA 354
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+Q G ++V++ +V MY+KCG L + F ++ R+++ +++ + L G+ +A
Sbjct: 355 LQLGMTSDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEAL 414
Query: 393 EFFRDIIEKGLNPDESTFSALLCAC 417
F+++ +GL PD++ S+L+ AC
Sbjct: 415 SIFQEMQHEGLKPDKTILSSLVSAC 439
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 195/401 (48%), Gaps = 3/401 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ + K +H V + + + L+ +Y+ + A +FD+ + W +++
Sbjct: 243 EDVDSCKSIHGYVVRRCVF--GVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMM 300
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y + + L + R +K + + A +E DL + VH A+ G+
Sbjct: 301 AGYVHHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYALQLGMT 360
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D + ++ +V+ Y+K + +A + F + DLV+ ++ +S G+ ++L +F M
Sbjct: 361 SDIVVATPIVSMYAKCGELKKAKEFFLSLEGRDLVVWSAFLSALVQAGYPGEALSIFQEM 420
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G PD+ L L+S E S +G+ +H + +K+ S V++ LVSMY RC
Sbjct: 421 QHEGLKPDKTILSSLVSACAEISSSRLGKMMHCYVIKADMGSDISVATTLVSMYTRCKSF 480
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +FN + + D+V W+ LI G+++ GD AL F +L + G + D + S+L+A
Sbjct: 481 MYAMTLFNRMHYKDVVAWNTLINGFTKCGDPRLALEMFLRLQLSGVQPDSGTMVSLLSAC 540
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNIITY 375
A +++ G HG +I++G E + V AL+DMY+KCG L +F ++ +++
Sbjct: 541 ALLDDLYLGICFHGNIIKNGIESEMHVKVALIDMYAKCGSLCTAENLFHLNKHVKDEVSW 600
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
N +I G +G +A F + + + P+ TF +L A
Sbjct: 601 NVMIAGYLHNGCANEAISTFNQMKLESVRPNLVTFVTILPA 641
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 171/340 (50%), Gaps = 6/340 (1%)
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ +++L ++ + + +++P L+L NS+I ++ + ++++ + M +G PD
Sbjct: 68 LLQIHARL-IVQQCTLAPNSITNPSLILWNSLIRAYSRLHLFQEAIKSYQTMSYMGLEPD 126
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+YT ++ G IH + ++ + LV MY + +++A VF+
Sbjct: 127 KYTFTFVLKACTGALDFHEGVAIHQDIASRELECDVFIGTGLVDMYCKMGHLDNARKVFD 186
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIASVLAAAAKSANVW 323
+ D+ +W+A+I+G SQ + +AL F+++ M+ G + D V I ++ A ++ +V
Sbjct: 187 KMPGKDVASWNAMISGLSQSSNPCEALEIFQRMQMEEGVEPDSVSILNLAPAVSRLEDVD 246
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
IHGYV++ + +VS++L+DMYSKCG + L Q+F+ M ++ I++ +++ G
Sbjct: 247 SCKSIHGYVVRRC--VFGVVSNSLIDMYSKCGEVKLAHQIFDQMWVKDDISWATMMAGYV 304
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG ++ + ++ K + ++ + + A + G+E+ + G+ +
Sbjct: 305 HHGCYFEVLQLLDEMKRKHIKMNKISVVNSVLAATETRDLEKGKEVHNYAL-QLGMTSDI 363
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+V + G L++A F SL + D V A LS
Sbjct: 364 VVATPIVSMYAKCGELKKAKEFFLSL-EGRDLVVWSAFLS 402
>gi|356506341|ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Glycine max]
Length = 895
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/534 (32%), Positives = 283/534 (52%), Gaps = 10/534 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH+LV K L + F LV +Y+ +L AR +FD+ P+R + WN++I YA
Sbjct: 196 QLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEG 255
Query: 84 RFN--DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ +A LF N++R + D+ + AC +L R +HG G G
Sbjct: 256 KCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSV 315
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L++ YSK + +A VF+ +S+ ++V +MIS + ++ LF+ M G
Sbjct: 316 CNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDE-----EDAVSLFNAMRVNGV 370
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P++ T +GLI + +L++ G IHG C+KS F S VS+ ++MYA+ C+ +
Sbjct: 371 YPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTK 430
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL--AAAAKS 319
+F L + V+W+ALI+GY+Q G Y +AL + ++ K + SVL AAA+
Sbjct: 431 IFEELNCRETVSWNALISGYAQNGSYKEALLTYLSA-VKEIKPNQYTFGSVLNAIAAAED 489
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++ G H ++++ G +VS AL+DMY K G + +VF ER + ++I
Sbjct: 490 ISLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAII 549
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
HG + ++ +G+NPD TF ++L ACC G+V+ G +F M +++ I
Sbjct: 550 SAYARHGDFESVMSLYTEMEREGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSI 609
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ +EHY MV +LG G L+EA + +P +V +LL C ++GN ++AE V
Sbjct: 610 EPTSEHYSIMVDMLGRVGRLDEAEELMHQIPGGPGLSVLQSLLGSCRLHGNMEMAEKVVG 669
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
+L E DP V+++N YAE G+W+ V ++R + G++KE G SWV S+
Sbjct: 670 RLIEMDPASSGPYVLMANLYAEKGKWEKVAEVRRGMRGRGVKKEVGFSWVDVSN 723
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 129/527 (24%), Positives = 241/527 (45%), Gaps = 53/527 (10%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H + + + L+++Y + A I+F+ + WN+++ + +
Sbjct: 98 QIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEES- 156
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRAC-SENSDLPGLRFVHGGAIVSGLGRDSITS 142
DA + +++ + D TY C ++ L G + +H + GLG +
Sbjct: 157 --VDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQ-LHSLVVKCGLGCEVFIG 213
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG--FWDKSLQLFDWMLRLG 200
+ALVT YS+ ++DEA +VFD + + DLV N+MISG+A G + +++ LF M+R G
Sbjct: 214 NALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHG 273
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D +L G +S L +G+ IHG K + ++ V +VL+S Y++C A
Sbjct: 274 MLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAK 333
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF S+ + ++V+W+ +I+ D A+ F + + G + V ++ A
Sbjct: 334 AVFESISNRNVVSWTTMIS-----IDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRN 388
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
V G IHG I+ F VS++ + MY+K + ++FE ++ R +++N++I
Sbjct: 389 LVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALIS 448
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +G +A + + K + P++ TF ++L A E+ +
Sbjct: 449 GYAQNGSYKEALLTYLSAV-KEIKPNQYTFGSVLNAIA--------------AAEDISLN 493
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+ +++K LGL DP VSGALL +YG +I+ Q
Sbjct: 494 HGKSCHSHLLK-LGLG----------------TDPIVSGALLD---MYGKR--GDIIESQ 531
Query: 501 LFENDP---RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
N+ + A+ ++S YA G ++ VM L ++ G+ ++
Sbjct: 532 RVFNETLERTQFAWTAIIS-AYARHGDFESVMSLYTEMEREGINPDS 577
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 100/347 (28%), Positives = 162/347 (46%), Gaps = 14/347 (4%)
Query: 87 DAKSLFKN--LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A + FKN L + D T A +AC S L G + +HG A+ SG S++
Sbjct: 60 QALTAFKNHFQLHSLENVDEVTVALSLKACQGESKL-GCQ-IHGFAVCSGFVSFVTVSNS 117
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K +A+ VF+ +S PD+V N+++SGF +L M G D
Sbjct: 118 LMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLSGFEES---VDALNFARSMHYCGIAFD 174
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T ++ W G +H +K ++ + LV+MY+R ++ A VF+
Sbjct: 175 PVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFD 234
Query: 265 SLFHPDLVTWSALITGYSQQGD-YG-KALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+ DLV+W+A+I+GY+Q+G YG +A+ F + G D V + ++A N+
Sbjct: 235 EMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNL 294
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IHG + G+ V V + L+ YSKC VFE++S RN++++ ++I
Sbjct: 295 ELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMI--- 351
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
A F + G+ P++ TF L+ A LV +G I
Sbjct: 352 --SIDEEDAVSLFNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTI 396
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 131/272 (48%), Gaps = 9/272 (3%)
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG--KTPDEYTLVGLISGLWEPS 219
FD + P+ N + H ++L F +L + DE T+ + S
Sbjct: 34 FDFIPHPNAASVNHSMLNCLHSRLPFQALTAFKNHFQLHSLENVDEVTVALSLKACQGES 93
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
L G IHGF + S F S+ VS+ L+ MY + A VF +L HPD+V+W+ +++
Sbjct: 94 KL--GCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLS 151
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G+ + D AL + R ++ G DPV S LA G +H V++ G
Sbjct: 152 GFEESVD---ALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLGC 208
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY--QAFEFFRD 397
V + +ALV MYS+ G L +VF+ M ER+++++N++I G G Y +A F +
Sbjct: 209 EVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFVN 268
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ G+ D + + + AC H + GR+I
Sbjct: 269 MVRHGMLIDHVSLTGAVSACGHMKNLELGRQI 300
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 50/97 (51%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL+ K H+ + K L DP + L+ +Y + ++ +F++T +R+ F W +II
Sbjct: 491 SLNHGKSCHSHLLKLGLGTDPIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIIS 550
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
AYA F SL+ + R + PD+ T+ + AC
Sbjct: 551 AYARHGDFESVMSLYTEMEREGINPDSITFLSVLAAC 587
>gi|147862014|emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
Length = 822
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 175/569 (30%), Positives = 284/569 (49%), Gaps = 36/569 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL+ ++LH + + P KLV Y+ N+L A ++ + + F WN +I
Sbjct: 188 KSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLI 247
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+Y A S +K +++ ++PDNFTY + +AC E DL + VH S +
Sbjct: 248 SSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIK 307
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
I +AL++ Y K + A +FD + + D V NSMIS +A G W+++ +LF M
Sbjct: 308 WSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSM 367
Query: 197 -------------------LRLGKTPDEYTL-------------VGLISGLWEPSLL--- 221
LR G L V LI GL S +
Sbjct: 368 WAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACSHIGDA 427
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+G+ IH F ++S F D V + L++MY+RC + AY +F + L++W+++I+G
Sbjct: 428 KLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNSIISGC 487
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELS 340
+A + R++ + G + + V IASVL A+ AN+ G H Y+ + F+
Sbjct: 488 CHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDH 547
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+++ +ALVDMY++ G + +VF+ + ER+ +TY S+I G G+ G A + F ++
Sbjct: 548 LLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNN 607
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+ PD T A+L AC H GLV G+ +F +M YG+ EH+ M L G AG L
Sbjct: 608 FQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLN 667
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
+A I ++P PA+ L+ C I+ N+++ E A +L E P Y V+++N YA
Sbjct: 668 KAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYA 727
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
G W+ + K+R + D G+RK G +WV
Sbjct: 728 AAGCWNKLAKVRXFMRDLGVRKAPGCAWV 756
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 163/385 (42%), Gaps = 35/385 (9%)
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
+C++ L R +HG I G + I LVT YS +L+ +A + + +
Sbjct: 183 SCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFP 242
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N +IS + GF K+L + M++ G PD +T ++ E L G+ +H
Sbjct: 243 WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN 302
Query: 233 KSSFDSYDYVSSVLVSMYARC---------------------NCM----------NSAYH 261
S V + L+SMY +C N M N A+
Sbjct: 303 ASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFE 362
Query: 262 VFNSLFHPD----LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+F S++ D ++ W+ + GY + G+Y AL ++ G D V + L A +
Sbjct: 363 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKXGSHLDSVALIIGLGACS 422
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G IH + I+ F V ++L+ MYS+C L +F+ M +++I++NS
Sbjct: 423 HIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCKDLKHAYLLFQLMEAKSLISWNS 482
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G + +A R+++ G+ P+ T +++L C + G+E MT
Sbjct: 483 IISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRRE 542
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEA 462
+ + +V + +G + EA
Sbjct: 543 DFKDHLLLWNALVDMYARSGKVLEA 567
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 37/410 (9%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ L KE+H + + + L+ +Y + AR LFDK P+R
Sbjct: 281 VLKACGEELDLGFGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERD 340
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNL-------------------LRT----------- 98
WNS+I YA +N+A LF ++ LRT
Sbjct: 341 AVSWNSMISVYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLS 400
Query: 99 QLKP-----DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
Q++ D+ ACS D + +H AI S G ++L+T YS+
Sbjct: 401 QMRKXGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNSLITMYSRCK 460
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
+ A +F + L+ NS+ISG H +++ L ML G P+ T+ ++
Sbjct: 461 DLKHAYLLFQLMEAKSLISWNSIISGCCHMDRSEEASFLLREMLLSGIEPNYVTIASVLP 520
Query: 214 GLWEPSLLSVGQGIHGFCL-KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+ L G+ H + + F + + + LV MYAR + A VF+ L D +
Sbjct: 521 LCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLGERDKM 580
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
T++++I GY QG+ AL F ++N K D + + +VL+A + S V G ++ +
Sbjct: 581 TYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQLLFEKM 640
Query: 333 IQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+G + + + D++ + G L ++ M + + ++G
Sbjct: 641 RSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIG 690
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF-- 263
+ + L+S + L+ G+ +HG + F+ + + LV+ Y+ N + A+ +
Sbjct: 175 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 234
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+++ HP W+ LI+ Y + G KAL ++++ +G + D SVL A + ++
Sbjct: 235 SNILHP--FPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 292
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H + + S++V +AL+ MY KCG +G+ +F+ + ER+ +++NS+I
Sbjct: 293 FGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYA 352
Query: 384 LHGFTYQAFEFF 395
G +AFE F
Sbjct: 353 SMGMWNEAFELF 364
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 129/323 (39%), Gaps = 51/323 (15%)
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
P L V Q I F K S V V A CN + SA F S+ D +L
Sbjct: 83 PKGLFVSQ-IQRFIPKKWKQSIKPVDIQHVHPSASCNALESAQETFTSV---DASMIDSL 138
Query: 278 ITGYSQQGDYGKALYYFR-----KLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHG 330
+T + G L F+ +L+ D ++ I+S+L++ ++ G +HG
Sbjct: 139 LTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHG 198
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
++I GFE ++ LV YS L + E + + +N +I +GF +
Sbjct: 199 HIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQK 258
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A ++ +++KG+ PD T+ ++L AC + G+E+ +
Sbjct: 259 ALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN---------------- 302
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
A WSL V AL+S +YG I A LF+ P + A
Sbjct: 303 -----------ASRIKWSL------IVHNALIS---MYGKCGKVGI-ARDLFDKIPERDA 341
Query: 511 --YKVMLSNTYAEDGRWDDVMKL 531
+ M+S YA G W++ +L
Sbjct: 342 VSWNSMIS-VYASMGMWNEAFEL 363
>gi|297841915|ref|XP_002888839.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334680|gb|EFH65098.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 682
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/566 (29%), Positives = 286/566 (50%), Gaps = 36/566 (6%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA + + KLV Y+ N+ A+ + + + WN +I +YA
Sbjct: 65 QIHAHCVSSGVEYHSALVPKLVTFYSAFNLHREAQSINENSDILHPLPWNVLIASYAKNE 124
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
F + + +K ++ ++PD FTY + +AC E D+ R VHG VS +
Sbjct: 125 LFEEVVAAYKRMVSKGIRPDAFTYPSVLKACGETLDVASGRVVHGSIEVSSYKCSLYVCN 184
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML------ 197
AL++ Y + + A ++FD +S+ D V N++I+ +A G W ++ +LFD M
Sbjct: 185 ALISMYKRFGNVGIARRLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMRFSGVEV 244
Query: 198 --------------------------RLGKTPDEYTLVGLISGLWEPSLLS---VGQGIH 228
R+ P V +I GL SL+ +G+ IH
Sbjct: 245 SVITWNIISGGYLHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 304
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
G + S+D D V + L++MY++C+ + +A+ VF L TW+++I+GY+Q
Sbjct: 305 GLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSIISGYAQVNKSE 364
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSAL 347
+A Y R++ + G + + + +AS+L A+ AN+ G H Y+++ F+ M+ ++L
Sbjct: 365 EASYLLREMLLAGFQPNFITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 424
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
VD+Y+K G + QV MSE + +TY S+I G G G A F ++I G+ PD
Sbjct: 425 VDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEGRVALALFDEMIRSGIKPDP 484
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
T A+L AC H LV++G+ +F +M +YGI+ +H+ MV L G AG L +A I
Sbjct: 485 VTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 544
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
+P A LL+ CHI+GN+++ + A +L E P Y V+++N YA G W
Sbjct: 545 RMPYEPSGATWATLLNACHIHGNTEIGKWAAEKLLEMKPENPGYYVLIANMYATAGSWSK 604
Query: 528 VMKLRDDIVDNGLRKEAGVSWVSGSS 553
+ ++R + D G+RK+ G +W++ S
Sbjct: 605 LAEVRTIMRDLGVRKDPGCAWINTDS 630
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/468 (23%), Positives = 193/468 (41%), Gaps = 50/468 (10%)
Query: 85 FNDAKSLFKNLLRTQLKPDNFT-------YACITRACSEN-SDLPGLRFVHGGAIVSGLG 136
+DA F +LLR Q P + A + AC + + +PGL+ +H + SG+
Sbjct: 19 LHDAFKTF-SLLRLQSSPSAVSGDVVLHSAASLLSACVDVLAFVPGLQ-IHAHCVSSGVE 76
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S LVT YS +L EA + + + N +I+ +A +++ + + M
Sbjct: 77 YHSALVPKLVTFYSAFNLHREAQSINENSDILHPLPWNVLIASYAKNELFEEVVAAYKRM 136
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G PD +T ++ E ++ G+ +HG SS+ YV + L+SMY R +
Sbjct: 137 VSKGIRPDAFTYPSVLKACGETLDVASGRVVHGSIEVSSYKCSLYVCNALISMYKRFGNV 196
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA------------ 304
A +F+ + D V+W+A+I Y+ G + +A F K+ G +
Sbjct: 197 GIARRLFDHMSERDAVSWNAVINCYASVGMWSEAFELFDKMRFSGVEVSVITWNIISGGY 256
Query: 305 -----------------------DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
DPV + L A + + G IHG I ++
Sbjct: 257 LHTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHRSYDGID 316
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V + L+ MYSKC L VF+ E ++ T+NS+I G + +A R+++
Sbjct: 317 NVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSIISGYAQVNKSEEASYLLREMLLA 376
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
G P+ T +++L C + G+E + + T + +V + +G +
Sbjct: 377 GFQPNFITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVA 436
Query: 462 AYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
A + +L +D +L+ YGN VA LF+ R G
Sbjct: 437 AKQ-VSNLMSEIDEVTYTSLIDG---YGNQGEGR-VALALFDEMIRSG 479
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 142/305 (46%), Gaps = 15/305 (4%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H L S L+ +Y+ + L +A I+F KT + S+ WNSII YA
Sbjct: 301 KEIHGLAIHRSYDGIDNVRNTLITMYSKCDDLRNAFIVFQKTEENSLCTWNSIISGYAQV 360
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD-SIT 141
++ +A L + +L +P+ T A I C+ ++L + H + +D ++
Sbjct: 361 NKSEEASYLLREMLLAGFQPNFITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTML 420
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++LV Y+K I A +V + +S+ D V S+I G+ + G +L LFD M+R G
Sbjct: 421 WNSLVDVYAKSGKIVAAKQVSNLMSEIDEVTYTSLIDGYGNQGEGRVALALFDEMIRSGI 480
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIH-----GFCLKSSFDSYDYVSSVLVSMYARCNCM 256
PD T+V ++S L+ GQ + + ++ + S +V +Y R +
Sbjct: 481 KPDPVTMVAVLSACSHSKLVHEGQRLFMKMQPKYGIRPCLQHF----SCMVDLYGRAGFL 536
Query: 257 NSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP---VLIASV 312
A + + + + P TW+ L+ G+ + KL ++ K +P VLIA++
Sbjct: 537 AKAKDIIHRMPYEPSGATWATLLNACHIHGNTEIGKWAAEKL-LEMKPENPGYYVLIANM 595
Query: 313 LAAAA 317
A A
Sbjct: 596 YATAG 600
>gi|225460143|ref|XP_002275945.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Vitis vinifera]
Length = 748
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 176/569 (30%), Positives = 284/569 (49%), Gaps = 36/569 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL+ ++LH + + P KLV Y+ N+L A ++ + + F WN +I
Sbjct: 114 KSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLI 173
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+Y A S +K +++ ++PDNFTY + +AC E DL + VH S +
Sbjct: 174 SSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIK 233
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
I +AL++ Y K + A +FD + + D V NSMIS +A G W+++ +LF M
Sbjct: 234 WSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFELFGSM 293
Query: 197 -------------------LRLGKTPDEYTL-------------VGLISGLWEPSLL--- 221
LR G L V LI GL S +
Sbjct: 294 WAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACSHIGDA 353
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+G+ IH F ++S F D V + L++MY+RC + AY +F + L+TW+++I+G
Sbjct: 354 KLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGC 413
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELS 340
+A + R++ + G + + V IASVL A+ AN+ G H Y+ + F+
Sbjct: 414 CHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDH 473
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+++ +ALVDMY++ G + +VF+ + ER+ +TY S+I G G+ G A + F ++
Sbjct: 474 LLLWNALVDMYARSGKVLEARRVFDMLGERDKMTYTSMIAGYGMQGEGQAALKLFEEMNN 533
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+ PD T A+L AC H GLV G+ +F +M YG+ EH+ M L G AG L
Sbjct: 534 FQIKPDHITMIAVLSACSHSGLVTQGQLLFEKMRSLYGLTPHLEHFACMTDLFGRAGLLN 593
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
+A I ++P PA+ L+ C I+ N+++ E A +L E P Y V+++N YA
Sbjct: 594 KAKEIIRNMPYKPTPAMWATLIGACRIHRNTEIGEWAAEKLLEMKPENPGYYVLIANMYA 653
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
G W+ + K+R + D G+RK G +WV
Sbjct: 654 AAGCWNKLAKVRIFMRDLGVRKAPGCAWV 682
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/385 (24%), Positives = 163/385 (42%), Gaps = 35/385 (9%)
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
+C++ L R +HG I G + I LVT YS +L+ +A + + +
Sbjct: 109 SCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFP 168
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N +IS + GF K+L + M++ G PD +T ++ E L G+ +H
Sbjct: 169 WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN 228
Query: 233 KSSFDSYDYVSSVLVSMYARC---------------------NCM----------NSAYH 261
S V + L+SMY +C N M N A+
Sbjct: 229 ASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYASMGMWNEAFE 288
Query: 262 VFNSLFHPD----LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+F S++ D ++ W+ + GY + G+Y AL ++ G D V + L A +
Sbjct: 289 LFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALELLSQMRKCGSHLDSVALIIGLGACS 348
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G IH + I+ F V +AL+ MYS+C L +F+ M +++IT+NS
Sbjct: 349 HIGDAKLGKEIHSFAIRSCFGEVDTVKNALITMYSRCKDLKHAYLLFQLMEAKSLITWNS 408
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G + +A R+++ G+ P+ T +++L C + G+E MT
Sbjct: 409 IISGCCHMDRSEEASFLLREMLLFGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRRE 468
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEA 462
+ + +V + +G + EA
Sbjct: 469 DFKDHLLLWNALVDMYARSGKVLEA 493
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 100/192 (52%), Gaps = 4/192 (2%)
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF-- 263
+ + L+S + L+ G+ +HG + F+ + + LV+ Y+ N + A+ +
Sbjct: 101 HPISSLLSSCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITEN 160
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+++ HP W+ LI+ Y + G KAL ++++ +G + D SVL A + ++
Sbjct: 161 SNILHP--FPWNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLG 218
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H + + S++V +AL+ MY KCG +G+ +F+ + ER+ +++NS+I
Sbjct: 219 FGKEVHESINASRIKWSLIVHNALISMYGKCGKVGIARDLFDKIPERDAVSWNSMISVYA 278
Query: 384 LHGFTYQAFEFF 395
G +AFE F
Sbjct: 279 SMGMWNEAFELF 290
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 129/323 (39%), Gaps = 51/323 (15%)
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
P L V Q I F K S V V A CN + SA F S+ D +L
Sbjct: 9 PKGLFVSQ-IQRFIPKKWKQSIKPVDIQHVHPSASCNALESAQETFTSV---DASMIDSL 64
Query: 278 ITGYSQQGDYGKALYYFR-----KLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHG 330
+T + G L F+ +L+ D ++ I+S+L++ ++ G +HG
Sbjct: 65 LTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHG 124
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
++I GFE ++ LV YS L + E + + +N +I +GF +
Sbjct: 125 HIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQK 184
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A ++ +++KG+ PD T+ ++L AC + G+E+ +
Sbjct: 185 ALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESIN---------------- 228
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
A WSL V AL+S +YG I A LF+ P + A
Sbjct: 229 -----------ASRIKWSL------IVHNALIS---MYGKCGKVGI-ARDLFDKIPERDA 267
Query: 511 --YKVMLSNTYAEDGRWDDVMKL 531
+ M+S YA G W++ +L
Sbjct: 268 VSWNSMIS-VYASMGMWNEAFEL 289
>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
bursa-pastoris]
Length = 706
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/576 (29%), Positives = 299/576 (51%), Gaps = 36/576 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQ 66
L L + ++L + +HA + K L + +KL+ L+ + L A +FD +
Sbjct: 6 LSLLHNCKTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQE 65
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
++ +WN++ R +AL+ A L+ ++ L P+++T+ + +AC+++ + +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQI 125
Query: 127 HGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLI 155
HG + G RD ++ +AL+ Y+ I
Sbjct: 126 HGHVLKLGCDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYI 185
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A K+FD + D+V N++ISG+A G + ++L+LF M++ PDE T+V ++S
Sbjct: 186 XSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSAC 245
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ + + +G+ +H + F S + + L+ +Y +C + +A +F L + D+++W+
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWN 305
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
LI GY+ Y +AL F+++ G+ + V + S+L A A + G IH Y+ +
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKR 365
Query: 336 --GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
G + ++L+DMY+KCG + QVF++M R++ ++N++I G +HG AF+
Sbjct: 366 LKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFD 425
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F + + G+ PD+ TF LL AC H G+++ GR IF MTE+Y I K EHY M+ LL
Sbjct: 426 IFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLL 485
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G +G +EA I S+ D + +LL C ++GN +L E A L + +P+ V
Sbjct: 486 GHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYV 545
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+LSN YA GRW++V K R + D G++K G S +
Sbjct: 546 LLSNIYATAGRWNEVAKRRALLNDKGMKKVPGCSSI 581
>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1047
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/535 (30%), Positives = 267/535 (49%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +L ++LHA K + L+ LYA + + +A F +T +V LWN
Sbjct: 384 SDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNV 443
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
++ AY L ++ +F+ + ++ P+ +TY I + C DL +H I +
Sbjct: 444 MLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTS 503
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
++ S L+ Y+KL +D A + + D+V +MI+G+ F DK+L F
Sbjct: 504 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR 563
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
ML G DE L +S L GQ IH S F S + LV++Y++C
Sbjct: 564 QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCG 623
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ AY F D + W+AL++G+ Q G+ +AL F ++N +G ++ S +
Sbjct: 624 NIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVK 683
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
AA+++AN+ G +H + + G++ V +A++ MY+KCG + + F +S +N ++
Sbjct: 684 AASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSMKNEVS 743
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N++I HGF +A + F +I + P+ T +L AC H GLV+ G E F M
Sbjct: 744 WNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEYFESMN 803
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
EYG+ K EHY+ +V +L AG L A FI +P D V LLS C ++ N ++
Sbjct: 804 TEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHKNMEIG 863
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E AH L E +P A V+LSN YA +WD R + + G++KE G SW+
Sbjct: 864 EFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWI 918
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 115/423 (27%), Positives = 212/423 (50%), Gaps = 1/423 (0%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K++ SL ++LH+ + K + + KL+ Y L A +FD+ P+R++F WN
Sbjct: 79 KTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGALKVFDEMPERTIFTWN 138
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS-DLPGLRFVHGGAIV 132
+I+ A LF ++ + P+ T++ + AC S + +H I
Sbjct: 139 KMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIIY 198
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
GLG+ +I + L+ YS+ +D A +VFDG+ D +MISG + ++++L
Sbjct: 199 QGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKNECEVEAIRL 258
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F M LG P Y ++S + L +G+ +HG LK F S YV + LVS+Y
Sbjct: 259 FCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFH 318
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ SA H+F+++ D VT++ LI G SQ G KA+ F+++ + G + D +AS+
Sbjct: 319 LGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASL 378
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
+ A + ++ G +H Y + GF + + AL+++Y+KC + + F N+
Sbjct: 379 VVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENV 438
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+ +N +++ GL +F FR + + + P++ T+ ++L C G + G +I ++
Sbjct: 439 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 498
Query: 433 MTE 435
+ +
Sbjct: 499 IIK 501
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 115/472 (24%), Positives = 219/472 (46%), Gaps = 2/472 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++HA + L + L+ LY+ N + AR +FD + W ++I +
Sbjct: 190 EQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAMISGLSKN 249
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF ++ + P + ++ + AC + L +HG + G D+
Sbjct: 250 ECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVC 309
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV+ Y L + A +F +S D V N++I+G + CG+ +K+++LF M G
Sbjct: 310 NALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLE 369
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD TL L+ L GQ +H + K F S D + L+++YA+C+ + +A +
Sbjct: 370 PDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCSDIETALNY 429
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++V W+ ++ Y D + FR++ ++ + S+L + ++
Sbjct: 430 FLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDL 489
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ F+L+ V S L+DMY+K G L + + ++++++ ++I G
Sbjct: 490 ELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY 549
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+ F +A FR ++++G+ DE + + AC + +G++I + G +
Sbjct: 550 TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVS-GFSSD 608
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+V L GN+EEAY + + D AL+S GN++ A
Sbjct: 609 LPFQNALVTLYSKCGNIEEAY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 659
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 209/454 (46%), Gaps = 1/454 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL K +SL ++LH LV K D + LV LY L SA +F QR
Sbjct: 277 VLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRD 336
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I + A LFK + L+PD+ T A + ACS + L + +H
Sbjct: 337 AVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHA 396
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
G + AL+ Y+K S I+ A+ F ++VL N M+ +
Sbjct: 397 YTTKLGFASNDKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRN 456
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S ++F M P++YT ++ L +G+ IH +K+SF YV SVL+
Sbjct: 457 SFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLID 516
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ +++A+ + D+V+W+ +I GY+Q KAL FR++ +G ++D V
Sbjct: 517 MYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVG 576
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ + ++A A + G IH GF + +ALV +YSKCG + FE
Sbjct: 577 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE 636
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ I +N+++ G G +A F + +G++ + TF + + A + G++
Sbjct: 637 AGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTFGSAVKAASETANMKQGKQ 696
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ +T+ G ++TE ++ + G++ +A
Sbjct: 697 VHAVITKT-GYDSETEVCNAIISMYAKCGSISDA 729
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/338 (28%), Positives = 161/338 (47%), Gaps = 2/338 (0%)
Query: 100 LKPDNFTYACITRAC-SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
++P++ T + C N L R +H + G ++ S L+ Y +D A
Sbjct: 63 IRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYLFKGDLDGA 122
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+KVFD + + + N MI A K LF M+ TP+E T G++
Sbjct: 123 LKVFDEMPERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGG 182
Query: 219 SL-LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
S+ V + IH + V + L+ +Y+R ++ A VF+ L+ D +W A+
Sbjct: 183 SVAFDVVEQIHARIIYQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLKDHSSWVAM 242
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I+G S+ +A+ F + + G P +SVL+A K ++ G +HG V++ GF
Sbjct: 243 ISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGF 302
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
V +ALV +Y G L +F MS+R+ +TYN++I GL G+ +A E F+
Sbjct: 303 SSDTYVCNALVSLYFHLGSLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKR 362
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+ GL PD +T ++L+ AC G + G+++ T+
Sbjct: 363 MQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTK 400
>gi|357118484|ref|XP_003560984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Brachypodium distachyon]
Length = 678
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 275/529 (51%), Gaps = 5/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LH V KA D F LV +YA L +AR +FD+ P R+V W S++
Sbjct: 148 RRLHCDVVKAGG-GDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQN 206
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ LF + + + P +T A + AC+ L R +HG + GL + +
Sbjct: 207 GLAKEGLVLFNEMRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFIT 266
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF--DWMLRLG 200
+A++ Y K ++A +VFD +S DLVL +MI G+ G +L LF D +R+
Sbjct: 267 AAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRI- 325
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+ T+ ++S + LS+G+ IHG +K D V + LV MYA+C ++ A
Sbjct: 326 -VPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAK 384
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F + + D+VTW++LI GY++ AL F + +QG D + + + L+A
Sbjct: 385 GIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLG 444
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G H Y ++H F ++ V++AL+++Y+KC L +VF M++RN +T+ ++I
Sbjct: 445 DLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIG 504
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G+ G + + + F ++++ + P+E+ F+++L C H G+V G++ F M + I
Sbjct: 505 GYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGKKCFESMAHYFNIT 564
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+HY MV +L AGNLEEA FI +P D ++ A L C ++ + AE ++
Sbjct: 565 PSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSIWQAFLHGCKLHSRLEFAEEAVNR 624
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ P + VM+SN Y GRWD + +R + + GL K G S V
Sbjct: 625 MMVLHPDTPDFCVMMSNLYTSYGRWDKSLAIRKLMKERGLVKLPGCSSV 673
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 122/409 (29%), Positives = 197/409 (48%), Gaps = 4/409 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + LHA + LLR TKL+ YA L SAR + D+TP + + +
Sbjct: 40 TLPSLRALHARLLAHGLLRGLRAHTKLLSCYAALGDLASARRVLDETPHPDAYTYKVALG 99
Query: 78 AYALAHRFNDAKSLFKNLLR--TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+A A R +A ++ +++ R + D + +A ++D R +H + +G
Sbjct: 100 WHAAAGRHAEAVAVHRDMRRRCPAEQEDVVVLSLALKAAVRSADFGYGRRLHCDVVKAG- 158
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
G D + LV Y+K + A KVFD + D ++V SM+SG G + L LF+
Sbjct: 159 GGDLFVMNNLVDMYAKGGDLKNARKVFDRIPDRNVVSWTSMLSGCLQNGLAKEGLVLFNE 218
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M + P EYT+ ++ L G+ IHG +K S ++++ ++ MY +C
Sbjct: 219 MRQESILPSEYTMASVLMACTMLGSLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGE 278
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A VF+ L DLV W+ +I GY+Q G AL F + V IA+VL+A
Sbjct: 279 AEDARQVFDELSFVDLVLWTTMIVGYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSA 338
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+A+ N+ G IHG ++ G + +V +ALVDMY+KC L +F + ++++T+
Sbjct: 339 SAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTW 398
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLV 423
NS+I G + A F + +G PD + L AC C G L+
Sbjct: 399 NSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLL 447
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 190/402 (47%), Gaps = 10/402 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL + + +H V K L+ + F ++ +Y AR +FD+ + LW ++I
Sbjct: 243 SLHQGRLIHGSVMKHGLVSNHFITAAMLDMYVKCGEAEDARQVFDELSFVDLVLWTTMIV 302
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y DA LF + ++ P++ T A + A ++ +L R +HG ++ G
Sbjct: 303 GYTQNGSPLDALLLFVDDKFMRIVPNSVTIATVLSASAQLRNLSLGRSIHGISVKLGAVE 362
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ + +ALV Y+K + +A +F V + D+V NS+I+G+A +L LF M
Sbjct: 363 NDVVMNALVDMYAKCKALSDAKGIFGRVLNKDVVTWNSLIAGYAENDMGSDALMLFSHMR 422
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G PD ++V +S L +G+ H + +K +F S YV++ L+++Y +C +
Sbjct: 423 VQGSLPDAISVVNALSACVCLGDLLIGKCFHTYAVKHAFMSNIYVNTALLNLYNKCADLP 482
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
SA VF+ + + VTW A+I GY QGD ++ F ++ + + + S+L+ +
Sbjct: 483 SAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAGSIDLFNEMLKDNIQPNEAVFTSILSTCS 542
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMS-ERNIIT 374
+ V G + H F ++ + + +VD+ ++ G L ++ + M + +
Sbjct: 543 HTGMVTVGKKCF-ESMAHYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQADTSI 601
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALL 414
+ + + G LH EF + + + L+PD F ++
Sbjct: 602 WQAFLHGCKLH----SRLEFAEEAVNRMMVLHPDTPDFCVMM 639
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 122/293 (41%), Gaps = 30/293 (10%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++LS + +H + K + + LV +YA L A+ +F + +
Sbjct: 335 VLSASAQLRNLSLGRSIHGISVKLGAVENDVVMNALVDMYAKCKALSDAKGIFGRVLNKD 394
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS+I YA +DA LF ++ PD + AC DL + H
Sbjct: 395 VVTWNSLIAGYAENDMGSDALMLFSHMRVQGSLPDAISVVNALSACVCLGDLLIGKCFHT 454
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ + ++AL+ Y+K + + A +VF ++D + V +MI G+ G
Sbjct: 455 YAVKHAFMSNIYVNTALLNLYNKCADLPSAQRVFSEMNDRNTVTWGAMIGGYGMQGDSAG 514
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S+ LF+ ML+ P+E ++S +++VG+
Sbjct: 515 SIDLFNEMLKDNIQPNEAVFTSILSTCSHTGMVTVGK----------------------- 551
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
C S H FN P + ++ ++ ++ G+ +AL + +K+ MQ
Sbjct: 552 -----KCFESMAHYFN--ITPSMKHYACMVDVLARAGNLEEALEFIQKMPMQA 597
>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 676
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 284/534 (53%), Gaps = 3/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL+ K LH + K+ L F+ KL+ Y +V+ AR LFD+ P R + WNS+I
Sbjct: 15 KSLTTLKSLHTHILKSGSLF-SFFGHKLIDGYIKCSVITEARKLFDEMPNRHIVTWNSMI 73
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
++ + +A L+ N+L + PD +T++ I +A SE + HG A+V G
Sbjct: 74 SSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFE 133
Query: 137 -RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++ +V Y+K + +A VFD V D D+VL ++I G+ G ++L++F+
Sbjct: 134 VSDGFVATGIVDMYAKFGKMKDARFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFED 193
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ P+EYTL ++ L G+ IHG +KS +S + L++MY++CN
Sbjct: 194 MVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNM 253
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ + VFNSL + VTW++ I G Q G AL FR++ + +S+L A
Sbjct: 254 VEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHA 313
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ A + G IH ++ G + + V +AL+ +Y KCG + VFE+++E ++++
Sbjct: 314 CSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSI 373
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N++I +GF ++A E F + + G P+ TF ++L AC + GLV +G +IF+ +
Sbjct: 374 NTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRN 433
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+ I+ +HY M+ LLG A EEA I P D LL+ C I+G ++AE
Sbjct: 434 NHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGKNP-DVIQWRTLLNACKIHGEVEMAE 492
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ + PR G ++L+N YA G+WD+V++++ D L+K +SWV
Sbjct: 493 KFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWV 546
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S L +++HA+ K + + + L+ LY + AR +F+ +
Sbjct: 310 ILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELD 369
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V N++I AYA ++A LF+ + + KP+ T+ I AC+
Sbjct: 370 VVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLACN 416
>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
Length = 820
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/528 (30%), Positives = 274/528 (51%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA V K D F T L+ Y++ AR +FD + + W ++ Y
Sbjct: 167 VHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENEC 226
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F ++ LF + KP+NFT+A + +AC + VHG A + +
Sbjct: 227 FEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVE 286
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K +D+A++VF+ + D++ + MI+ +A ++++++F M R P+
Sbjct: 287 LIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPN 346
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++TL L+ L +G IH +K D +VS+ L+ MYA+C M ++ +F+
Sbjct: 347 QFTLASLLQACASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFS 406
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ V+W+ +I GY Q G+ KAL F+ + + V +SVL A A A + P
Sbjct: 407 ESPNCTDVSWNTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEP 466
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G+ IH ++ ++ + +V +AL+DMY+KCG + VF+ + E + +++N++I G +
Sbjct: 467 GSQIHSLSVKTIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSV 526
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + F ++E PD+ TF +L AC + GL++ G+ F M EEY I+ E
Sbjct: 527 HGLYGEALKTFESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAE 586
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV LLG +G+L++A + +P V ALLS C I+ + +L I A ++ E
Sbjct: 587 HYTCMVWLLGRSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEI 646
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
+P A V+LSN YA RW +V +R + G+RKE G+SW+
Sbjct: 647 EPEDEATHVLLSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQ 694
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 204/410 (49%), Gaps = 2/410 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH + K D F L+ Y + LP A LFD+ P R+ + ++I+ Y+
Sbjct: 64 KYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPDRNTVSFVTLIQGYSQC 123
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSIT 141
RF++A LF L + + F ++ + + +++ L F VH G D+
Sbjct: 124 LRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLV-SAEWAKLGFSVHACVYKLGFDSDAFV 182
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+AL+ YS + A +VFD + D+V M++ + +++SL+LF M +G
Sbjct: 183 GTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIVGF 242
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ +T ++ + +VG+ +HG K+S+ +V L+ +Y + ++ A
Sbjct: 243 KPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIKSGDVDDALQ 302
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF + D++ WS +I Y+Q +A+ F ++ + +AS+L A A +
Sbjct: 303 VFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGLVLPNQFTLASLLQACASLVD 362
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IH +V++ G +++V VS+AL+DMY+KCG + +Q+F +++N+VI+G
Sbjct: 363 LQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSWNTVIVG 422
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
G +A F+D++E + E T+S++L AC + G +I +
Sbjct: 423 YVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHS 472
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 149/315 (47%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
+ + Y + ++C N D +++H I G D ++ L+ Y K + +A K+F
Sbjct: 43 NTYIYGSLLQSCIRNGDCATGKYLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLF 102
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + D + V ++I G++ C + +++ LF + G + + ++ L
Sbjct: 103 DEMPDRNTVSFVTLIQGYSQCLRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAK 162
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G +H K FDS +V + L+ Y+ C A VF+++ + D+V+W+ ++ Y
Sbjct: 163 LGFSVHACVYKLGFDSDAFVGTALIDCYSVCGYAECARQVFDAIEYKDMVSWTGMVACYV 222
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ + ++L F ++ + G K + ASVL A G +HG + + +
Sbjct: 223 ENECFEESLKLFSRMRIVGFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELF 282
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V L+D+Y K G + +QVFE M + ++I ++ +I + +A E F +
Sbjct: 283 VGVELIDLYIKSGDVDDALQVFEEMPKDDVIPWSFMIARYAQSEQSEEAIEMFCRMRRGL 342
Query: 403 LNPDESTFSALLCAC 417
+ P++ T ++LL AC
Sbjct: 343 VLPNQFTLASLLQAC 357
>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840 [Vitis vinifera]
Length = 713
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/525 (29%), Positives = 267/525 (50%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K L+ F + L+ +Y N + R +F + P R+V W +II A
Sbjct: 138 LHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGY 197
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A F + R++++ D++T+A +AC+++ L R +H A+ G S ++
Sbjct: 198 NKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANT 257
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L T Y+K ++ + +F+ +S D+V ++I+ G + ++Q F M +P+
Sbjct: 258 LATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPN 317
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
EYT +ISG + + G+ +H L + V + +++MYA+C + S+ +F+
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+V+WS +I GYSQ G +A + M+G K +ASVL+A A +
Sbjct: 378 EMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH 437
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H YV+ G E + MV SAL++MY KCG + ++F+ +I+++ ++I G
Sbjct: 438 GKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE 497
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG++ + + F I GL PD TF +L AC H GLV+ G F M+++Y I E
Sbjct: 498 HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKE 557
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY M+ LL AG L +A I ++P D V LL C ++G+ + A ++ +
Sbjct: 558 HYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQL 617
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P + L+N YA G+W + +R + G+ KE G SW+
Sbjct: 618 EPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWI 662
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 222/457 (48%), Gaps = 7/457 (1%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITR 112
L +AR +FDK Q+ W ++I Y A+ ++A LFKN+ + + L+ D F + +
Sbjct: 65 LGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHK 124
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
AC NSD+ +HG A+ +GL SAL+ Y+K I E +VF + ++V
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVS 184
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
++I+G G+ ++L F M R D YT + + L+ G+ IH +
Sbjct: 185 WTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAM 244
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
K FD +V++ L +MY +C + +F + D+V+W+ +IT Q G A+
Sbjct: 245 KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQ 304
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ + A+V++ A A + G +H ++ G S+ V ++++ MY+
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG L +F M+ R+I++++++I G G +AFE + +G P E ++
Sbjct: 365 KCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALAS 424
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+L AC + ++ G+++ + G++ ++ + G++EEA S I+ +
Sbjct: 425 VLSACGNMAILEHGKQLHAYVL-SIGLEHTAMVLSALINMYCKCGSIEEA-SRIFDAAEN 482
Query: 473 VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
D A+++ +G S E++ LFE PR G
Sbjct: 483 DDIVSWTAMINGYAEHGYSR--EVI--DLFEKIPRVG 515
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 183/414 (44%), Gaps = 22/414 (5%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L+ +E+HA K F A L +Y L LF+K R V W +II
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ A F + + + P+ +T+A + C+ + + +H + GL
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++++T Y+K + + +F ++ D+V +++I+G++ G ++ +L WM
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYSQGGHVSEAFELLSWMR 411
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P E+ L ++S ++L G+ +H + L + V S L++MY +C +
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIE 471
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F++ + D+V+W+A+I GY++ G + + F K+ G + D V VL+A +
Sbjct: 472 EASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACS 531
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSA------LVDMYSKCGYLGLGIQVFETMS-ER 370
+ G V G+ + +S + ++D+ + G L + E M R
Sbjct: 532 HA-----GLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHR 586
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ + +++++ +HG + I++ L P+ CA H L N
Sbjct: 587 DDVVWSTLLRACRVHGDVERGRRTAERILQ--LEPN--------CAGTHITLAN 630
>gi|449463559|ref|XP_004149501.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
gi|449511944|ref|XP_004164096.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g14730-like [Cucumis sativus]
Length = 566
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/522 (30%), Positives = 280/522 (53%), Gaps = 13/522 (2%)
Query: 38 PFYATKLVRLYALNNVLPSARILF-DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
P T L+ +Y+ N + A ++F D +R+VF +N+II + D +K +
Sbjct: 10 PSSITSLINMYSRCNQMEEAVLVFRDPYHERNVFAYNAIIAGFVANGLAADGFQFYKRMR 69
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ PD FT+ C+ RAC E ++ R +HG GL + SALV Y K+ +
Sbjct: 70 SVGVMPDKFTFPCVVRACCEFMEV---RKIHGCLFKMGLELNVFVGSALVNTYLKVDGTE 126
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A KVF+ + + D+VL N+MI+G+ G +K++ +F M G + +T ++S L
Sbjct: 127 DAEKVFEELPERDVVLWNAMINGYTKIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILT 186
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
++ G+ IHG K + S VS+ L+ MY +C A +F + DL +W++
Sbjct: 187 SMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNS 246
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+ + Q D+ L F K+ D + I +VL A + A + G IHGY+I +G
Sbjct: 247 IISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNG 306
Query: 337 FELS-----VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+ V++++A++DMY+KCG + +F+ M +++ ++N +I+G +HG+ +A
Sbjct: 307 LGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEA 366
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
+ F + E + PD TF +L AC H G V+ GR TRM E+G+ EHY ++
Sbjct: 367 LDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEHYTCIID 426
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPR---K 508
+LG AG+L EAY +P + + ALL C ++GN++L +V ++ + +P+
Sbjct: 427 MLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGNAELGNVVGEKITQLEPKHCGS 486
Query: 509 GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
G+Y +++S+ Y GR+++ +++R + + ++K G SW+
Sbjct: 487 GSY-ILMSSLYGVVGRYEEALEVRRTMKEQNVKKTPGCSWIE 527
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 180/378 (47%), Gaps = 17/378 (4%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+++H + K L + F + LV Y + A +F++ P+R V LWN++I Y
Sbjct: 92 EVRKIHGCLFKMGLELNVFVGSALVNTYLKVDGTEDAEKVFEELPERDVVLWNAMINGYT 151
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
N A +FK + + FT I + D+ R +HG IV+ +G S
Sbjct: 152 KIGHLNKAVVVFKRMGEEGISLSRFTTTSILSILTSMGDINNGRAIHG--IVTKMGYSSC 209
Query: 141 --TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+AL+ Y K ++A+ +F+ +++ DL NS+IS C D +L+LF ML
Sbjct: 210 VAVSNALIDMYGKCKHTEDALMIFEMINEKDLFSWNSIISAHEQCDDHDGTLRLFGKMLG 269
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS-----MYARC 253
PD T+ ++ + L G+ IHG+ + + + VL++ MYA+C
Sbjct: 270 SRVLPDVITITAVLPACSHLAALMHGREIHGYMIVNGLGKNENGDDVLLNNAIMDMYAKC 329
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
CM +A +F+ + + D+ +W+ +I GY+ G +AL F ++ K D V VL
Sbjct: 330 GCMKNADIIFDLMRNKDVASWNIMIMGYAMHGYGTEALDMFHRMCEAQIKPDVVTFVGVL 389
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVS----SALVDMYSKCGYLGLGIQVFETMS- 368
+A + + V G ++ + E V+ + + ++DM + G+LG + + +
Sbjct: 390 SACSHAGFVHQG---RSFLTRMELEFGVIPTIEHYTCIIDMLGRAGHLGEAYDLAQRIPL 446
Query: 369 ERNIITYNSVILGLGLHG 386
E N+I + +++ LHG
Sbjct: 447 EDNLILWMALLGACRLHG 464
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 129/289 (44%), Gaps = 15/289 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S ++ + +H +V K + L+ +Y A ++F+ ++
Sbjct: 181 ILSILTSMGDINNGRAIHGIVTKMGYSSCVAVSNALIDMYGKCKHTEDALMIFEMINEKD 240
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+F WNSII A+ + LF +L +++ PD T + ACS + L R +HG
Sbjct: 241 LFSWNSIISAHEQCDDHDGTLRLFGKMLGSRVLPDVITITAVLPACSHLAALMHGREIHG 300
Query: 129 GAIVSGLGR-----DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
IV+GLG+ D + ++A++ Y+K + A +FD + + D+ N MI G+A
Sbjct: 301 YMIVNGLGKNENGDDVLLNNAIMDMYAKCGCMKNADIIFDLMRNKDVASWNIMIMGYAMH 360
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-----FCLKSSFDS 238
G+ ++L +F M PD T VG++S + G+ F + + +
Sbjct: 361 GYGTEALDMFHRMCEAQIKPDVVTFVGVLSACSHAGFVHQGRSFLTRMELEFGVIPTIEH 420
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
Y + ++ M R + AY + + +L+ W AL+ G+
Sbjct: 421 Y----TCIIDMLGRAGHLGEAYDLAQRIPLEDNLILWMALLGACRLHGN 465
>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 734
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 166/573 (28%), Positives = 306/573 (53%), Gaps = 33/573 (5%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQR 67
L+L QS+ K++HA + K L F +KL+ A++ + A LF+ +
Sbjct: 33 LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
++F+WNS+IR +++ A F ++ + ++P+++T+ + ++C++ + + +H
Sbjct: 93 NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152
Query: 128 GGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLID 156
+ G RD+I+ +AL+ Y+ +D
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A ++FD + D+V N+MI+G+A G ++L LF+ M + P+E T+V ++S
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPNESTIVSVLSACA 272
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ + L +G + + S + + L+ MY++C + +A +F+ + D+++W+
Sbjct: 273 QSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWNV 332
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I GY+ Y +AL FR++ G + + S+L + A + G IH Y+ ++
Sbjct: 333 MIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNF 392
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+S +S++L+D+Y+KCG + QVF+ M +++ ++N++I GL +HG +AFE F
Sbjct: 393 NSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFS 452
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+ G+ P+E TF +L AC H GLV+ G++ F+ M ++Y I K++HY M+ LLG A
Sbjct: 453 KMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRA 512
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G EEA S + ++ D A+ G+LL C +G +L E+VA +LFE +P V+LS
Sbjct: 513 GLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLLS 572
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N YA G+WDDV ++R + D G++K G + +
Sbjct: 573 NIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTI 605
>gi|255559709|ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540005|gb|EEF41583.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 833
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 276/531 (51%), Gaps = 8/531 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H K DP+ T L+ +Y ++ SA +F++ P + + LWN++I AY
Sbjct: 261 KQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGN 320
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL----RFVHGGAIVSGLGRD 138
DA ++K + + D+FT + + S + GL R +H + L
Sbjct: 321 GYAYDALRIYKQMKLCTVLSDSFTILNVLTS----SSMAGLYDLGRLIHTEIVKRPLQSS 376
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
SAL+T YSK + A +F + + D+V S+ISGF + ++L F M
Sbjct: 377 ITIQSALLTMYSKFGDSNYANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEA 436
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
PD + +IS + +G IHGF +KS +V+S L+ MY++
Sbjct: 437 DLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPER 496
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A ++F+ + +LV W+++I+ Y + ++ F ++ D V SVLAA +
Sbjct: 497 AGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAAISS 556
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G +HGY+++ + V + L+DMY KCG L +FE +SE+N++ +NS+
Sbjct: 557 VAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKNLVAWNSM 616
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G G HG +A E F ++ G+ PD+ TF +LL +C H GL+ +G +F M ++G
Sbjct: 617 IGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCNHSGLIEEGLHLFEMMKMKFG 676
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + EHY+ +V L G AG L +AYSF+ ++P D ++ +LL C I+ N +L E+VA
Sbjct: 677 IEPRMEHYVNIVDLYGRAGCLGDAYSFVKNMPVEPDRSIWLSLLCSCKIHLNLELGEMVA 736
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++L +P KG+ V L N Y E WD LR + + GL+K G SW+
Sbjct: 737 NKLLNMEPSKGSNYVQLLNLYGEAELWDRTANLRASMKEKGLKKTPGCSWI 787
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 198/395 (50%), Gaps = 1/395 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS-VFLWNSIIRAYAL 81
K++H+ + + L DPF T L+ Y AR LF K RS + WN +I +
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ ++ + +K + ++ C AC + + + VH AI G D
Sbjct: 219 NGLWENSLEYYLLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYV 278
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L+T Y K +I+ A KVF+ V D ++ L N++IS + G+ +L+++ M
Sbjct: 279 HTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMKLCTV 338
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D +T++ +++ L +G+ IH +K S + S L++MY++ N A
Sbjct: 339 LSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSNYANS 398
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+++ D+V W ++I+G+ Q Y +AL +FR + K D ++AS+++A
Sbjct: 399 IFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISACTGLEK 458
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G IHG+VI+ G +L V V+S+L+DMYSK G+ +F M +N++ +NS+I
Sbjct: 459 VDLGCTIHGFVIKSGLQLDVFVASSLLDMYSKFGFPERAGNIFSDMPLKNLVAWNSIISC 518
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ + F ++ L PD +F+++L A
Sbjct: 519 YCRNNLPDLSINLFSQVLRNDLYPDSVSFTSVLAA 553
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 188/419 (44%), Gaps = 34/419 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR- 67
+L+ S +L K +H+ + L D + + L+ +Y A +FD+ P+
Sbjct: 59 LLKACASLSNLQYGKTIHSSIITTGLHSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSG 118
Query: 68 ----SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
V +WNSII Y RF + R Q +S
Sbjct: 119 VSVDDVTIWNSIIDGY---FRFGQLEEGMVQFGRMQ-----------------SSGYKEG 158
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAH 182
+ +H + + L D +AL+ Y K EA +F + D ++V N MI GF
Sbjct: 159 KQIHSYIVRNMLNFDPFLETALIDTYFKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGE 218
Query: 183 CGFWDKSLQLFDWMLRLGKTPD----EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
G W+ SL+ + L KT + + +S + +S G+ +H +K F+
Sbjct: 219 NGLWENSLEYY----LLAKTENVKVVSSSFTCTLSACGQGEFVSFGKQVHCDAIKVGFED 274
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
YV + L++MY +C + SA VFN + ++ W+ALI+ Y G AL ++++
Sbjct: 275 DPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYAYDALRIYKQMK 334
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+ +D I +VL +++ + G +IH +++ + S+ + SAL+ MYSK G
Sbjct: 335 LCTVLSDSFTILNVLTSSSMAGLYDLGRLIHTEIVKRPLQSSITIQSALLTMYSKFGDSN 394
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+F TM ER+++ + SVI G + +A +FFR + + PD ++++ AC
Sbjct: 395 YANSIFSTMKERDVVAWGSVISGFCQNRKYKEALDFFRAMEADLVKPDSDIMASIISAC 453
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 167/367 (45%), Gaps = 29/367 (7%)
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I++ ++ +A L+ ++ + FTY + +AC+ S+L + +H I +GL
Sbjct: 28 IKSLVQQRQYIEALKLYT---KSPVYTTRFTYPSLLKACASLSNLQYGKTIHSSIITTGL 84
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFD-----GVSDPDLVLCNSMISGFAHCGFWDKSL 190
D +S+L+ Y K +A+KVFD GVS D+ + NS+I G+ G
Sbjct: 85 HSDQYITSSLINIYVKCGTFTDAVKVFDQLPKSGVSVDDVTIWNSIIDGYFRFG------ 138
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
QL + M++ G+ SG E G+ IH + +++ + ++ + L+ Y
Sbjct: 139 QLEEGMVQFGRMQS--------SGYKE------GKQIHSYIVRNMLNFDPFLETALIDTY 184
Query: 251 ARCNCMNSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
+C A ++F L ++V W+ +I G+ + G + +L Y+ + K
Sbjct: 185 FKCGRPTEARYLFKKLKDRSNIVAWNVMIGGFGENGLWENSLEYYLLAKTENVKVVSSSF 244
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
L+A + V G +H I+ GFE V ++L+ MY KC + +VF + +
Sbjct: 245 TCTLSACGQGEFVSFGKQVHCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPD 304
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ I +N++I +G+ Y A ++ + + D T +L + GL + GR I
Sbjct: 305 KEIELWNALISAYVGNGYAYDALRIYKQMKLCTVLSDSFTILNVLTSSSMAGLYDLGRLI 364
Query: 430 FTRMTEE 436
T + +
Sbjct: 365 HTEIVKR 371
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L + K +H + + + D L+ +Y +L A+ +F++ +++
Sbjct: 550 VLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDMYIKCGLLKYAQHIFERISEKN 609
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WNS+I Y + A LF + + +KPD+ T+ + +C+ H
Sbjct: 610 LVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTFLSLLSSCN-----------HS 658
Query: 129 GAIVSGL 135
G I GL
Sbjct: 659 GLIEEGL 665
>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 177/593 (29%), Positives = 293/593 (49%), Gaps = 72/593 (12%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L +S + K++H+++ S+ D KLV YA L R +FD +++
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL---KPDN----FTYACITRACSENSDLP 121
V+LWN ++ YA F ++ LFK ++ + +P++ F C S NS +
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224
Query: 122 GL--------------------------------------------RFVHGGAIVSGLGR 137
G + VH AI S R
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S+ L+ YSK +D A++VF+ + + ++V SMI+G+ G D +++L M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G D + ++ L G+ +H + ++ +S +V + L+ MYA+C M
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A VF+++ D+++W+ +I G+ K D +A VL A A
Sbjct: 405 AANSVFSTMVVKDIISWNTMI------GEL---------------KPDSRTMACVLPACA 443
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G IHGY++++G+ V++ALVD+Y KCG LGL +F+ + ++++++
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G G+HG+ +A F ++ + G+ PDE +F ++L AC H GL+ G F M ++
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDF 563
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I+ K EHY MV LL GNL +AY FI +LP D + GALL C Y + +LAE V
Sbjct: 564 NIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYHDIELAEKV 623
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A ++FE +P Y V+L+N YAE +W++V +LR+ I GLRK G SW+
Sbjct: 624 AERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIE 676
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 271 LVTWSALITGYSQQGDYGKALYYF---RKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
+ ++A I + Q GD A+ +K ++ K +SVL A + G
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELICMCKKSELETKT-----YSSVLQLCAGLKSFTDGKK 120
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+H + + + + LV Y+ CG L G +VF+TM ++N+ +N ++ G
Sbjct: 121 VHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGD 180
Query: 388 TYQAFEFFRDIIEKGL 403
++ F+ ++EKG+
Sbjct: 181 FKESICLFKIMVEKGI 196
>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Cucumis sativus]
Length = 720
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 188/578 (32%), Positives = 296/578 (51%), Gaps = 41/578 (7%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+ +H+ L K LHAL K+ + + + + LY+ L +AR +FD T +V
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 70 FLWNSIIRAYA------LAHRFND-------------------------AKSLFKNLLRT 98
F +N++I AYA +AH+ D A LF +
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
L D FT + I AC N L +R +H ++V+GL +AL+T+YSK + EA
Sbjct: 135 FLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 159 IKVFDGVS-DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
++F +S D D V NSM+ + K+L+L+ M G D +TL +++
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN-CMNSAYHVFNSLFHPDLVTWSA 276
L G H +KS + +V S L+ +Y++C CM VF+ + +PDLV W+
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312
Query: 277 LITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I+GYS D +AL FR+L + G + D + V++A + ++ G +HG ++
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372
Query: 336 GFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ + V++AL+ MYSKCG L +F+TM E N ++YNS+I G HG +Q+
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F+ ++E G P TF ++L AC H G V DG+ F M +++GI+ + H+ M+ LLG
Sbjct: 433 FQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLG 492
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
AG L EA I ++ P DP ALL C I+GN +LA A++L + DP A
Sbjct: 493 RAGKLSEAERLIETI--PFDPGFFFWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPY 550
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
VML+N Y+++GR D +R + D G++K+ G SW+
Sbjct: 551 VMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIE 588
>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
chloroplastic-like [Brachypodium distachyon]
Length = 868
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 272/532 (51%), Gaps = 1/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ +E+HA V + L + LV +YA + +AR +FD WN++I
Sbjct: 211 LTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAG 270
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ H LF ++L +++P+ T +T A SDL + +H A+ G D
Sbjct: 271 HFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKRGFATD 330
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L+ YS L + EA VF + D + +MISG+ GF DK+L+++ M
Sbjct: 331 VAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALMEV 390
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+PD+ T+ ++ L VG +H F Y V++ LV MYA+ +
Sbjct: 391 NNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKIIEK 450
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF + D+++WS++I G+ +ALYYFR + + K + V + LAA A
Sbjct: 451 AIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHM-LADVKPNSVTFIAALAACAA 509
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ ++ G IH +V++ G V +AL+D+Y KCG G F ++++++N +
Sbjct: 510 TGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIM 569
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G HG A FF +++E G +PDE TF ALLC C G+V+ G E+F MTE+Y
Sbjct: 570 LAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCSRAGMVSQGWELFHSMTEKYS 629
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I +HY MV LL G L E Y+FI +P D AV GALL+ C I+ N +L E+ A
Sbjct: 630 IVPNLKHYACMVDLLSRVGRLTEGYNFINRMPITPDAAVWGALLNGCRIHRNIELGELAA 689
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ E +P Y V+LS+ YA+ G W +V K+R + GL + G SWV
Sbjct: 690 KIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVRKTMRVKGLEHDYGCSWVE 741
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 120/379 (31%), Positives = 196/379 (51%), Gaps = 5/379 (1%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K P+R VF WN ++ Y A +A L+ +L +PD +T+ C+ R+C D
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGGVPD 210
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L R VH + GLG + +ALVT Y+K ++ A KVFDG+S D + N+MI+G
Sbjct: 211 LTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAMIAG 270
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTL--VGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
+ L+LF ML P+ T+ V + SGL S L + IH +K F
Sbjct: 271 HFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLL--SDLDFAKEIHALAVKRGFA 328
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ + L+ MY+ M A VF+ + D ++W+A+I+GY + G KAL + +
Sbjct: 329 TDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVYALM 388
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ D V +AS LAA A + G +H GF ++V++ALV+MY+K +
Sbjct: 389 EVNNVSPDDVTVASALAACASLGRLDVGIKLHELATSKGFIRYIVVANALVEMYAKSKII 448
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
I+VF+ M ++++I+++S+I G + ++A +FR ++ + P+ TF A L AC
Sbjct: 449 EKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYYFRHMLAD-VKPNSVTFIAALAAC 507
Query: 418 CHGGLVNDGREIFTRMTEE 436
G + G+EI + +
Sbjct: 508 AATGSLRCGKEIHAHVLRQ 526
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A KVF + + D+ N M+ G+ GF +++L L+ ML G PD YT ++
Sbjct: 148 AWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGARPDVYTFPCVLRSCGG 207
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
L++G+ +H L+ V + LV+MYA+C + +A VF+ + D ++W+A+
Sbjct: 208 VPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAARKVFDGMSLTDCISWNAM 267
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHGYVIQH 335
I G+ + + L F L+M + +P L I SV A+ +++ IH ++
Sbjct: 268 IAGHFENHECEAGLELF--LHMLEDEVEPNLMTITSVTVASGLLSDLDFAKEIHALAVKR 325
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
GF V ++L+ MYS G +G VF M R+ +++ ++I G +GF +A E +
Sbjct: 326 GFATDVAFCNSLIQMYSSLGRMGEACTVFSRMETRDAMSWTAMISGYEKNGFPDKALEVY 385
Query: 396 RDIIEKGLNPDEST 409
+ ++PD+ T
Sbjct: 386 ALMEVNNVSPDDVT 399
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 3/184 (1%)
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ + ++SM R A+ VF + D+ +W+ ++ GY + G +AL + ++ G
Sbjct: 131 LGNAMLSMLVRFGETWHAWKVFAKMPERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAG 190
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D VL + ++ G +H +V++ G + V V +ALV MY+KCG +
Sbjct: 191 ARPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFGLGVEVDVLNALVTMYAKCGDVEAAR 250
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF+ MS + I++N++I G + E F ++E + P+ T +++ A G
Sbjct: 251 KVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVA---SG 307
Query: 422 LVND 425
L++D
Sbjct: 308 LLSD 311
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL KE+HA V + + + + L+ LY A F + V WN ++
Sbjct: 512 SLRCGKEIHAHVLRQGIASEGYVPNALLDLYVKCGQTGYAWAQFGAHGTKDVVSWNIMLA 571
Query: 78 AYALAHRFND-AKSLFKNLLRTQLKPDNFTYACITRACS 115
+ +AH D A S F +L T PD T+ + CS
Sbjct: 572 GF-VAHGHGDIALSFFNEMLETGEHPDEVTFVALLCGCS 609
>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 277/541 (51%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L+ +E+H V +A L + L+ +YA + AR +FD R
Sbjct: 151 ILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRD 210
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
W ++ AYA + ++ + +L+ ++P TY + AC + L + +H
Sbjct: 211 EVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHA 270
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ S D S+AL Y K + +A +VF+ + + D++ N+MI G G ++
Sbjct: 271 QIVESEHHSDVRVSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEE 330
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +F ML+ PD T + ++S P L+ G+ IH +K S + L++
Sbjct: 331 AHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDVRFGNALIN 390
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++ M A VF+ + D+V+W+AL+ GY+ G ++ F+K+ QG +A+ +
Sbjct: 391 MYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKIT 450
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
VL A + + G IH V++ G + V++AL+ MY KCG + I+V E MS
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+++T+N++I GL +G +A + F + + + P+ +TF ++ AC LV +GR
Sbjct: 511 TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRR 570
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M ++YGI +HY MV +L AG+L EA I ++P A+ GALL+ C +
Sbjct: 571 QFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAH 630
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN ++ E A Q + +P+ V LS YA G W DV KLR + + G++KE G SW
Sbjct: 631 GNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGVKKEPGRSW 690
Query: 549 V 549
+
Sbjct: 691 I 691
Score = 195 bits (496), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 213/419 (50%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L+ K++H + + + + + L++LY + AR LFDK +SV WN +I
Sbjct: 58 KDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMI 117
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA +A +LF + + L+PD FT+ I ACS + L R VH + +GL
Sbjct: 118 SGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLA 177
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
++ +AL++ Y+K + +A +VFD ++ D V ++ +A G+ +SL+ + M
Sbjct: 178 NNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYAQESLKTYHAM 237
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
L+ G P T + ++S + L G+ IH ++S S VS+ L MY +C +
Sbjct: 238 LQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVRVSTALTKMYIKCGAV 297
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF L + D++ W+ +I G G +A F ++ + D V ++L+A
Sbjct: 298 KDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSAC 357
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A+ + G IH ++ G V +AL++MYSK G + QVF+ M +R+++++
Sbjct: 358 ARPGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWT 417
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+++ G G ++F F+ ++++G+ ++ T+ +L AC + + G+EI + +
Sbjct: 418 ALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVVK 476
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 191/369 (51%), Gaps = 1/369 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D++ Y + ++C + DL + VH + G+ + + L+ Y ++EA ++F
Sbjct: 43 DSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYVHCGSVNEARRLF 102
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D S+ +V N MISG+AH G ++ LF M + G PD++T V ++S P+ L+
Sbjct: 103 DKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALN 162
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G+ +H +++ + V + L+SMYA+C + A VF+++ D V+W+ L Y+
Sbjct: 163 WGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYA 222
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G ++L + + +G + + +VL+A A + G IH +++ V
Sbjct: 223 ESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSDVR 282
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
VS+AL MY KCG + +VFE + R++I +N++I GL G +A F ++++
Sbjct: 283 VSTALTKMYIKCGAVKDAREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKEC 342
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ PD T+ A+L AC G + G+EI R ++ G+ + ++ + AG++++A
Sbjct: 343 VAPDRVTYLAILSACARPGGLACGKEIHARAVKD-GLVSDVRFGNALINMYSKAGSMKDA 401
Query: 463 YSFIWSLPK 471
+PK
Sbjct: 402 RQVFDRMPK 410
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 125/250 (50%)
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
W + ++ + G D Y V L+ + L+VG+ +H L+ Y+ +
Sbjct: 25 WYAPADVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINT 84
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ +Y C +N A +F+ + +V+W+ +I+GY+ +G +A F + +G + D
Sbjct: 85 LLKLYVHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPD 144
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
S+L+A + A + G +H V++ G + V +AL+ MY+KCG + +VF+
Sbjct: 145 KFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVGNALISMYAKCGSVRDARRVFD 204
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M+ R+ +++ ++ G+ ++ + + ++++G+ P T+ +L AC +
Sbjct: 205 AMASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEK 264
Query: 426 GREIFTRMTE 435
G++I ++ E
Sbjct: 265 GKQIHAQIVE 274
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 50/109 (45%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+ VL+ + +L KE+HA V KA + D A L+ +Y + A + +
Sbjct: 451 YMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMS 510
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
R V WN++I A R +A F+ + +++P+ T+ + AC
Sbjct: 511 TRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSAC 559
>gi|148906747|gb|ABR16520.1| unknown [Picea sitchensis]
Length = 644
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 284/557 (50%), Gaps = 27/557 (4%)
Query: 17 QSLSRTKELHALVAKASL-LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
+SL K LHA + + +D KLV +Y L AR +FD+ P ++V W ++
Sbjct: 78 KSLPDAKLLHAHMIQTQFECQDISLGNKLVSIYVKLGSLVEARRVFDEMPVKNVVSWTAM 137
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I AYA +A F + ++P++FT+A I AC+ DL L H + G
Sbjct: 138 IAAYARHEHGQEALGFFYEMQDVGIQPNHFTFASILPACT---DLEVLGEFHDEIVKGGF 194
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD- 194
+ + LV Y+K I+ A ++FD + D+V N+MI+G+ G + +L+LF
Sbjct: 195 ESNVFVGNGLVDMYAKRGCIEFARELFDKMPQRDVVSWNAMIAGYVQNGLIEDALKLFQE 254
Query: 195 --------W---MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC----LKSSFDSY 239
W M + D V L + E +L+S I G+ +K +F +
Sbjct: 255 IPKRDVITWNTMMAGYAQCGDVENAVELFEKMPEQNLVSWNTMIAGYVQNGSVKEAFKLF 314
Query: 240 DYVS-------SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ + ++S +A+ + A +F ++ ++V+W+A+I GYSQ G AL
Sbjct: 315 QIMPERNVISWNAVISGFAQNGQVEEALKLFKTMPECNVVSWNAMIAGYSQNGQAENALK 374
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ M K + A VL A A A + G H VI+ GF+ V+V + LV MY+
Sbjct: 375 LFGQMQMVDMKPNTETFAIVLPACAALAVLEQGNEAHEVVIRSGFQSDVLVGNTLVGMYA 434
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG + +VF+ M +++ + +++I+G ++G + ++ E F + GL PD TF
Sbjct: 435 KCGSIEDARKVFDRMRQQDSASLSAMIVGYAINGCSKESLELFEQMQFTGLKPDRVTFVG 494
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+L ACCH GLV++GR+ F MT Y I EHY M+ LLG AG +EA I +P
Sbjct: 495 VLSACCHAGLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIK 554
Query: 473 VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
D + G+LLS C + N DL E VA L +P+ A V+LSN YA GRWDD+ +R
Sbjct: 555 PDADMWGSLLSACRTHNNIDLGEKVAQHLIALNPQNPAPYVLLSNIYAAAGRWDDIGSVR 614
Query: 533 DDIVDNGLRKEAGVSWV 549
+ + D ++K+ G SW+
Sbjct: 615 NRMKDRKVKKKLGCSWI 631
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 109/441 (24%), Positives = 181/441 (41%), Gaps = 68/441 (15%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
HF + + L E H + K + F LV +YA + AR LFDK P
Sbjct: 166 HFTFASILPACTDLEVLGEFHDEIVKGGFESNVFVGNGLVDMYAKRGCIEFARELFDKMP 225
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYA----C--ITRACSENSD 119
QR V WN++I Y DA LF+ + + + N A C + A
Sbjct: 226 QRDVVSWNAMIAGYVQNGLIEDALKLFQEIPKRDVITWNTMMAGYAQCGDVENAVELFEK 285
Query: 120 LPGLRFVHGGAIVSGL-----------------GRDSITSSALVTAYSKLSLIDEAIKVF 162
+P V +++G R+ I+ +A+++ +++ ++EA+K+F
Sbjct: 286 MPEQNLVSWNTMIAGYVQNGSVKEAFKLFQIMPERNVISWNAVISGFAQNGQVEEALKLF 345
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
+ + ++V N+MI+G++ G + +L+LF M + P+ T ++ ++L
Sbjct: 346 KTMPECNVVSWNAMIAGYSQNGQAENALKLFGQMQMVDMKPNTETFAIVLPACAALAVLE 405
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G H ++S F S V + LV MYA+C + A VF+ + D + SA+I GY+
Sbjct: 406 QGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVGYA 465
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
G ++L F ++ G K D V VL+A +
Sbjct: 466 INGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHA----------------------- 502
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIIT-----YNSVILGLGLHGFTYQAFEFFRD 397
G + G Q F+ M+ IT Y +I LG G F+ D
Sbjct: 503 ------------GLVDEGRQYFDIMTRFYHITPAMEHYGCMIDLLGRAG----CFDEAND 546
Query: 398 IIEK-GLNPDESTFSALLCAC 417
+I K + PD + +LL AC
Sbjct: 547 LINKMPIKPDADMWGSLLSAC 567
>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 879
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/535 (31%), Positives = 284/535 (53%), Gaps = 2/535 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L +++HA+V + +D F A LV +Y+ + A ++F K P+ V WN+ I
Sbjct: 216 RDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFI 275
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL--RFVHGGAIVSG 134
L A L + + L P+ FT + I +AC+ R +HG I +
Sbjct: 276 SGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKAC 335
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D ALV Y+K L+D+A KVF+ + DL+L N++ISG +H G +SL LF
Sbjct: 336 ADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFC 395
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M + G + TL ++ +S +H K F S +V + L+ Y +CN
Sbjct: 396 RMRKEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCN 455
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
C+ A VF +++ ++++IT SQ A+ F ++ +G + DP +++S+L
Sbjct: 456 CLRYANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLN 515
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A + G +H ++I+ F V +ALV Y+KCG + F + ++ +++
Sbjct: 516 ACASLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVS 575
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++++I GL HG +A + FR ++++ + P+ T +++LCAC H GLV++ + F+ M
Sbjct: 576 WSAMIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMK 635
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
E +GI EHY M+ LLG AG L++A + S+P + AV GALL+ ++ + +L
Sbjct: 636 EMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELG 695
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ A +LF +P K V+L+NTYA G WD+V K+R + D+ ++KE +SWV
Sbjct: 696 KLAAEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWV 750
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 129/416 (31%), Positives = 207/416 (49%), Gaps = 3/416 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ-RSVFLWNSIIRAYALA 82
++HA+ L D F A LV +Y + AR +FD+ + R+ WN ++ A+
Sbjct: 121 QVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKN 180
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R +DA LF ++ + ++P+ F ++C+ AC+ + DL R VH + +G +D T+
Sbjct: 181 DRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTA 240
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV YSKL I A VF V D+V N+ ISG G +L+L M G
Sbjct: 241 NALVDMYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLV 300
Query: 203 PDEYTLVGLIS--GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+ +TL ++ ++G+ IHGF +K+ DS DY+ LV MYA+ ++ A
Sbjct: 301 PNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDAR 360
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + DL+ W+ALI+G S G +G++L F ++ +G + +A+VL + A
Sbjct: 361 KVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLE 420
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ +H + GF V + L+D Y KC L +VFE S NII + S+I
Sbjct: 421 AISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNIIAFTSMIT 480
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
L A + F +++ KGL PD S+LL AC G+++ + +
Sbjct: 481 ALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKR 536
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/401 (26%), Positives = 199/401 (49%), Gaps = 8/401 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
QSL +HA + K+ LL + L+ Y+ + SAR +FD+TP W+S++
Sbjct: 18 QSLFLGAHIHAHLLKSGLLH--AFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLV 75
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
AY+ +A + F+ + ++ + F + + C+ ++ L G++ VH A+ +GL
Sbjct: 76 TAYSNNALPREALAAFRAMRARGVRCNEFALPIVLK-CAPDAGL-GVQ-VHAVAVSTGLS 132
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++ALV Y +DEA +VFD D + V N M+S F +++LF
Sbjct: 133 GDIFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGE 192
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G P+E+ +++ L G+ +H +++ +D + ++ LV MY++
Sbjct: 193 MVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVDMYSKLGD 252
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ A VF + D+V+W+A I+G G AL ++ G + ++S+L A
Sbjct: 253 IHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFTLSSILKA 312
Query: 316 AAKSANVWPGAV--IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A + IHG++I+ + + ALVDMY+K G L +VFE + ++++
Sbjct: 313 CAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEWIPRKDLL 372
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+N++I G G ++ F + ++G + + +T +A+L
Sbjct: 373 LWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVL 413
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 122/275 (44%), Gaps = 8/275 (2%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +G IH LKS + L+S Y++C SA VF+ P V+WS+L+T
Sbjct: 20 LFLGAHIHAHLLKSGL--LHAFRNHLLSFYSKCRLPGSARRVFDETPDPCHVSWSSLVTA 77
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
YS +AL FR + +G + + + VL A + G +H + G
Sbjct: 78 YSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAG---LGVQVHAVAVSTGLSGD 134
Query: 341 VMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ V++ALV MY G++ +VF E +RN +++N ++ + A E F +++
Sbjct: 135 IFVANALVAMYGGFGFVDEARRVFDEAARDRNAVSWNGMMSAFVKNDRCSDAVELFGEMV 194
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+ P+E FS ++ AC + GR++ M G +V + G++
Sbjct: 195 WSGVRPNEFGFSCVVNACTGSRDLEAGRKVHA-MVVRTGYDKDVFTANALVDMYSKLGDI 253
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
A +PK D A +S C ++G+ A
Sbjct: 254 HMAALVFGKVPK-TDVVSWNAFISGCVLHGHDQHA 287
>gi|115466810|ref|NP_001057004.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|55773755|dbj|BAD72438.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113595044|dbj|BAF18918.1| Os06g0185700 [Oryza sativa Japonica Group]
gi|125596287|gb|EAZ36067.1| hypothetical protein OsJ_20377 [Oryza sativa Japonica Group]
Length = 673
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 275/527 (52%), Gaps = 1/527 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LH V KA D F LV +YA L +AR +FD+ P+R+V W S++
Sbjct: 143 RRLHCDVVKAGGA-DGFVMNSLVDMYAKAGDLENARKVFDRVPERNVVSWTSMLSGSIQN 201
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ LF + + + P +T + AC+ L R++HG I GL +S S
Sbjct: 202 GIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLGGLHQGRWIHGSVIKYGLSTNSFIS 261
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+K +++A +VFD + D+VL +MI G+ +LQLF +
Sbjct: 262 ASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVGYTQNKRPLDALQLFLHKKFVSIV 321
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T+ +IS + L +G+ +H +K D V + LV MYA+C + A +
Sbjct: 322 PNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSI 381
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V W++++ GYS+ G ++L F ++ MQG D + + + L+A A++
Sbjct: 382 FGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADL 441
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G H Y I++ F ++ V++AL+++YSKC L +VF M++RN +T++++I G
Sbjct: 442 HIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGY 501
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+ G + + + F +++++ ++P+E F+++L AC H G+V G+E F M + I
Sbjct: 502 GMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGKEYFDSMARHFNITPS 561
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY MV ++ AGNLEEA FI ++P +V G+ L C ++ + E ++
Sbjct: 562 MKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWGSFLHGCKLHSRLEFGEEAIKKMA 621
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
P + V++SN Y GRWD +R + + GL K G S V
Sbjct: 622 ALHPETPDFYVLMSNLYTSYGRWDKSQTIRRWMQEQGLVKLPGCSSV 668
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 190/378 (50%), Gaps = 3/378 (0%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR--TQ 99
TKL+ YA L SAR + D TP+ + + ++ A DA +L +++ R
Sbjct: 59 TKLLSCYAALGDLASARGVLDGTPRPDAYAYRVMLGWLVDAGSHADAVALHRDMRRRCPA 118
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
+ + +AC ++D R +H + +G G D ++LV Y+K ++ A
Sbjct: 119 AAQADVVLSLALKACVRSADFRYGRRLHCDVVKAG-GADGFVMNSLVDMYAKAGDLENAR 177
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
KVFD V + ++V SM+SG G ++ L LF+ M + P EYT+V +++
Sbjct: 178 KVFDRVPERNVVSWTSMLSGSIQNGIAEEGLVLFNEMRQDNVHPSEYTMVSVLAACAMLG 237
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
L G+ IHG +K + ++S+ L+ MYA+C + A VF+ L D+V W+A+I
Sbjct: 238 GLHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIV 297
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
GY+Q AL F + V IA+V++A+A+ ++ G +H ++ G
Sbjct: 298 GYTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTME 357
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
S +V +ALVDMY+KC L +F + ++++ +NS++ G +G ++ F +
Sbjct: 358 SDVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMR 417
Query: 400 EKGLNPDESTFSALLCAC 417
+G++PD + L AC
Sbjct: 418 MQGISPDAISVVNALSAC 435
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 198/400 (49%), Gaps = 8/400 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + + +H V K L + F + L+ +YA + AR +FD+ + LW ++I
Sbjct: 239 LHQGRWIHGSVIKYGLSTNSFISASLLDMYAKCEKVEDARRVFDELEFVDIVLWTAMIVG 298
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y R DA LF + + P++ T A + A ++ LP R VH + G
Sbjct: 299 YTQNKRPLDALQLFLHKKFVSIVPNSVTIATVISASAQLRHLPLGRSVHAIGVKLGTMES 358
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ +ALV Y+K + EA +F + D+V NSM++G++ G ++SL LF+ M
Sbjct: 359 DVVRNALVDMYAKCQALPEANSIFGRILIKDVVAWNSMMAGYSENGMANESLVLFNRMRM 418
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G +PD ++V +S + L +G+G H + +K +F S YV++ L+++Y++C + S
Sbjct: 419 QGISPDAISVVNALSACVCLADLHIGKGFHTYAIKYAFMSNIYVNTALLNLYSKCADLPS 478
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VFN + + VTWSA+I GY QGD ++ F ++ + + V+ S+L+A +
Sbjct: 479 AQRVFNDMTDRNSVTWSAMIGGYGMQGDSAGSIDLFNEMLKENIHPNEVVFTSILSACSH 538
Query: 319 SANVWPGAVIHGYVIQH-GFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYN 376
+ V G + +H S+ + +VD+ ++ G L ++ + M + I +
Sbjct: 539 TGMVTAGKEYFDSMARHFNITPSMKHYACMVDVMARAGNLEEALEFIQNMPIKAGISVWG 598
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEK--GLNPDESTFSALL 414
S + G LH EF + I+K L+P+ F L+
Sbjct: 599 SFLHGCKLH----SRLEFGEEAIKKMAALHPETPDFYVLM 634
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 98/217 (45%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ S + L + +HA+ K + LV +YA LP A +F + +
Sbjct: 330 VISASAQLRHLPLGRSVHAIGVKLGTMESDVVRNALVDMYAKCQALPEANSIFGRILIKD 389
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS++ Y+ N++ LF + + PD + AC +DL + H
Sbjct: 390 VVAWNSMMAGYSENGMANESLVLFNRMRMQGISPDAISVVNALSACVCLADLHIGKGFHT 449
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI + ++AL+ YSK + + A +VF+ ++D + V ++MI G+ G
Sbjct: 450 YAIKYAFMSNIYVNTALLNLYSKCADLPSAQRVFNDMTDRNSVTWSAMIGGYGMQGDSAG 509
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
S+ LF+ ML+ P+E ++S +++ G+
Sbjct: 510 SIDLFNEMLKENIHPNEVVFTSILSACSHTGMVTAGK 546
>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 829
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/510 (32%), Positives = 270/510 (52%), Gaps = 9/510 (1%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ ++A N L + R +FD +R+V +W +I YA + ++A LF ++L +PD
Sbjct: 195 LIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEAVELFLDMLENGFQPD 254
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL---SLIDEAIK 160
+T + + AC+E + +H A+ GL DS S LV Y+K + A +
Sbjct: 255 QYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDMYAKSHNGQSLHNARE 314
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ-LFDWMLRLGKTPDEYTLVGLISGLWEPS 219
VF+ + +++ +++SG+ G D + LF ML G P+ T ++
Sbjct: 315 VFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPNHITYSSMLKACANLG 374
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
G+ IH C+KS+ + V + LVSMYA + A H F+ L+ ++V++S +
Sbjct: 375 DQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFDQLYEKNMVSFSGNLD 434
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G + Y Y ++ + S+++AAA + G +H ++ GF
Sbjct: 435 GDGRSNTYQD--YQIERMEL---GISTFTFGSLISAAASVGMLTKGQRLHALSLKAGFGS 489
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ ++LV MYS+CGYL QVF+ M++ N+I++ S+I GL HG+ +A E F D+I
Sbjct: 490 DRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISGLAKHGYAARALELFHDMI 549
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+ P++ T+ A+L AC H GLV +G+E F M + +G+ + EHY MV LLG +G +
Sbjct: 550 AAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHGLIPRMEHYACMVDLLGRSGLV 609
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
E+A FI +P VD V LL C + N D+ EI A+ + + +P+ A V+LSN Y
Sbjct: 610 EDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAANHVIQLEPQDPAPYVLLSNLY 669
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
AE G WD V ++R + D L KE G+SW+
Sbjct: 670 AEAGLWDQVARIRSLMRDKNLMKEKGLSWM 699
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 117/424 (27%), Positives = 211/424 (49%), Gaps = 23/424 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ--RSVFLWNSII 76
L R + H L + L D A L+ LY+ + + +AR +FD P R + W ++
Sbjct: 65 LGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWTAMA 124
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL- 135
+ +A LF L L P+ FT T+AC + L + GGA++ GL
Sbjct: 125 SCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASE----LFHLAGGAVL-GLV 179
Query: 136 ------GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
G D AL+ ++K + +VFDG+ + +V+ +I+ +A G+ D++
Sbjct: 180 FKLGFWGTDVSVGCALIDMFAKNGDLVAMRRVFDGLFERTVVVWTLLITRYAQSGYSDEA 239
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
++LF ML G PD+YTL ++S E +GQ +H L+ +S VS LV M
Sbjct: 240 VELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVSCGLVDM 299
Query: 250 YARCN---CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY-GKALYYFRKLNMQGKKAD 305
YA+ + +++A VFN + +++ W+AL++GY Q+G + + F K+ +G + +
Sbjct: 300 YAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLNEGIRPN 359
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ +S+L A A + G IH + ++ +V +ALV MY++ G + F+
Sbjct: 360 HITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEEARHAFD 419
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ E+N+++++ + G G TYQ ++ R +E G++ TF +L+ A G++
Sbjct: 420 QLYEKNMVSFSGNLDGDG-RSNTYQDYQIER--MELGIST--FTFGSLISAAASVGMLTK 474
Query: 426 GREI 429
G+ +
Sbjct: 475 GQRL 478
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ + LHAL KA D LV +Y+ L A +FD+ +V W S+I
Sbjct: 472 LTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSMISG 531
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A A LF +++ +KP++ TY + ACS
Sbjct: 532 LAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACS 568
>gi|242076082|ref|XP_002447977.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
gi|241939160|gb|EES12305.1| hypothetical protein SORBIDRAFT_06g019190 [Sorghum bicolor]
Length = 772
Score = 285 bits (730), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 163/545 (29%), Positives = 285/545 (52%), Gaps = 7/545 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
LE L+ + LH K + P + L +Y+ + A LF + P++ V
Sbjct: 226 LEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTEDACSLFPELPEKDV 285
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
W S+I Y +A LF+ ++ + L+PD+ +C+ + ++ G + H
Sbjct: 286 VSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGNSGNVHGGKAFHAV 345
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ G + + +AL++ Y K L+D A +VF + D N MI G+ G K
Sbjct: 346 IMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLMIVGYCKAGCDVKC 405
Query: 190 LQLFDWMLRLGKT----PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
L+L+ M + T D +LV IS L +G+ H + +K D V++V
Sbjct: 406 LELYREM-QFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIKHWLDEDSSVANV 464
Query: 246 LVSMYARCNCMNSAYHVFN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+ MY RC + A +F + D+VTW+ LI+ Y+ G A+ + ++ +G
Sbjct: 465 LIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVSLYDQMLTEGLTP 524
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ + +V++A A + G IH YV + G++ V +++AL+DMY+KCG LG ++F
Sbjct: 525 NSTTLITVISACANLVALERGEKIHSYVKEMGWDYDVSINTALIDMYAKCGQLGTARRIF 584
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
++M + +++ +N +I G G+HG QA E F + + P+ TF A+L ACCH GL+
Sbjct: 585 DSMLQHDVVAWNVMISGYGMHGEAKQALELFGKMEGGSIKPNGVTFLAILSACCHSGLLE 644
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+GR++FTRM +Y ++ +HY MV LLG +G+L+EA + ++P D + G LLS
Sbjct: 645 EGRQLFTRMG-KYSLEPNLKHYACMVDLLGKSGHLQEAEDMVLAMPVEPDGGIWGTLLSA 703
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C ++ + ++ +A + F +D Y +++SN+Y +WD++ KLR+ + ++G++K A
Sbjct: 704 CKLHDDFEMGLRIAKKAFASDAENEGYYILISNSYGSAKKWDEIEKLREAMKNHGVQKGA 763
Query: 545 GVSWV 549
G S V
Sbjct: 764 GWSAV 768
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 184/383 (48%), Gaps = 8/383 (2%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+HAL + L + P KLV Y+ A + F P+ FLWNS+IR + A
Sbjct: 30 RVHALAVTSGLSQRPDIVAKLVSAYSSAGRPGLAALAFSACPRPDAFLWNSLIRTHHCAS 89
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL----GRDS 139
F A + + +L + +P FT A +E L VH + GL G
Sbjct: 90 DFVAALNAHRRMLASSARPSPFTVPLAASAAAELGALGVGASVHAYCVRYGLLAVDGGSV 149
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
S+LV Y++ ++ +A+K+F+ + + D+V +++SG G L+ M+RL
Sbjct: 150 AVPSSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRL 209
Query: 200 ---GKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
GK P+ T+ + L+ G+ +HG+ +K V S L SMY++C+
Sbjct: 210 AGDGKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHS 269
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A +F L D+V+W++LI Y +G +A+ F+++ G + D VL++ +L+
Sbjct: 270 TEDACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSG 329
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
S NV G H +++ F +V+V +AL+ MY K + +VF + +R+ ++
Sbjct: 330 LGNSGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSW 389
Query: 376 NSVILGLGLHGFTYQAFEFFRDI 398
N +I+G G + E +R++
Sbjct: 390 NLMIVGYCKAGCDVKCLELYREM 412
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 188/402 (46%), Gaps = 8/402 (1%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR---- 97
+ LV +YA V+ A LF++ +R V W +++ D ++R
Sbjct: 153 SSLVYMYARCGVVRDAVKLFEEMRERDVVAWTAVVSGCVRNGECGDGLRYLVEMVRLAGD 212
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
+ +P++ T AC +L R +HG A+ G+G + SAL + YSK ++
Sbjct: 213 GKARPNSRTMESGLEACGVLDELNSGRCLHGYAVKVGVGDSPMVISALFSMYSKCHSTED 272
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +F + + D+V S+I + G ++++LF M+ G PD+ + L+SGL
Sbjct: 273 ACSLFPELPEKDVVSWTSLIGIYCWRGLIREAMELFQEMMESGLQPDDVLVSCLLSGLGN 332
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
+ G+ H +K +F V + L+SMY + +++A VF L D +W+ +
Sbjct: 333 SGNVHGGKAFHAVIMKRNFGDNVLVGNALISMYGKFELVDNAGRVFRLLHQRDADSWNLM 392
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKK---ADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
I GY + G K L +R++ + D + S +++ ++ + G H Y I+
Sbjct: 393 IVGYCKAGCDVKCLELYREMQFRDTYEFLCDANSLVSAISSCSRLVELRLGRSAHCYSIK 452
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSVILGLGLHGFTYQAFE 393
H + V++ L+ MY +CG ++F + +++T+N++I G + A
Sbjct: 453 HWLDEDSSVANVLIGMYGRCGKFDHACKIFGLAKLKGDVVTWNTLISSYAHLGHSNTAVS 512
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+ ++ +GL P+ +T ++ AC + + G +I + + E
Sbjct: 513 LYDQMLTEGLTPNSTTLITVISACANLVALERGEKIHSYVKE 554
>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
Length = 863
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 276/536 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ ++LHA K D T +V +YA N L AR F P +V N+++
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
A +A LF+ ++R+ ++ D + + + AC+E + VH AI SG D
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++A++ Y K + EA +F G+ D V N++I+ G +D ++ F+ MLR
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD++T ++ L G +H +KS S +V+S +V MY +C ++
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 505
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A + + + +V+W+A+++G+S + +A +F ++ G K D A+VL A
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 565
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IHG +I+ +SS LVDMY+KCG + + VFE + +R+ +++N++
Sbjct: 566 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAM 625
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G LHG +A F + ++ + P+ +TF A+L AC H GL +DG F MT Y
Sbjct: 626 ICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYK 685
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
++ + EH+ MV +LG + +EA FI S+P D + LLS C I + ++AE+ A
Sbjct: 686 LEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAA 745
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
+ DP + ++LSN YAE G+W DV + R + L+KE G SW+ S
Sbjct: 746 SNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 801
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 210/429 (48%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L+ + + LS ++HAL K L D + LV +Y L A F P+R
Sbjct: 154 VLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER 213
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W + I ++ LF + R L +YA R+C+ S L R +H
Sbjct: 214 NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLH 273
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
AI + D + +A+V Y+K + + +A + F G+ + + N+M+ G G
Sbjct: 274 AHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGI 333
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ LF +M+R D +L G+ S E GQ +H +KS FD V++ ++
Sbjct: 334 EAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVL 393
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+Y +C + AY +F + D V+W+A+I Q G Y + +F ++ G K D
Sbjct: 394 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDF 453
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SVL A A ++ G ++H VI+ G V+S +VDMY KCG + ++ + +
Sbjct: 454 TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 513
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++++N+++ G L+ + +A +FF ++++ GL PD TF+ +L C + + G+
Sbjct: 514 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573
Query: 428 EIFTRMTEE 436
+I ++ ++
Sbjct: 574 QIHGQIIKQ 582
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 190/382 (49%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD ++ Y+ + +A LFD P V WN+++ Y F ++ LF +
Sbjct: 81 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R + PD T+A + ++CS +L VH A+ +GL D T SALV Y K +
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+A+ F G+ + + V + I+G + + L+LF M RLG + +
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S L+ G+ +H +K+ F S V + +V +YA+ N + A F L + + T +
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSN 320
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A++ G + G +A+ F+ + + D V ++ V +A A++ + G +H I+
Sbjct: 321 AMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 380
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
GF++ + V++A++D+Y KC L +F+ M +++ +++N++I L +G F
Sbjct: 381 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440
Query: 396 RDIIEKGLNPDESTFSALLCAC 417
+++ G+ PD+ T+ ++L AC
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKAC 462
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + +SL +H V K+ L D F A+ +V +Y ++ A+ L D+ +
Sbjct: 458 VLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ 517
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN+I+ ++L +A+ F +L LKPD+FT+A + C+ + + + +HG
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D SS LV Y+K + +++ VF+ V D V N+MI G+A G +
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG-QGIHGFCLKSSFDSYDYVSSVLV 247
+L++F+ M + P+ T V ++ L G + H + + +V
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 248 SMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
+ R A NS+ F D V W L++
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 139/330 (42%), Gaps = 31/330 (9%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC------- 183
+VSG ++ S+ L+ Y++ + A +VFD + D V N+M++ ++H
Sbjct: 44 VVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103
Query: 184 ------------------------GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
G + +S+ LF M R G +PD T L+
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 163
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
LS+G +H +K+ + S LV MY +C ++ A F + + V+W A I
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 223
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G Q Y + L F ++ G AS + A + + G +H + I++ F
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+V +A+VD+Y+K L + F + + T N++++GL G +A F+ +I
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ D + S + AC G+++
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQV 373
>gi|449437962|ref|XP_004136759.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 591
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 286/545 (52%), Gaps = 10/545 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLP------SARILFDKTPQRS 68
S +S+S K++H + K L P KL+ L + ++ P S + Q
Sbjct: 15 SCKSISHLKQIHGVAIKTPSLSLPNLIPKLIFLSSSSSSSPDLFYIRSILLTHSHDAQFC 74
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ L N+IIR+ + +L L+PD FT + +A + + + +H
Sbjct: 75 LSLCNAIIRSISRNSINLSPMEFLNEMLVVGLEPDGFTIPLVLKALALIQGIREGQQIHA 134
Query: 129 GAIVSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+I +G+ G + S+ L+ YS I + KVFD DLV ++I F G +
Sbjct: 135 RSIKTGMVGFNVYVSNTLMRLYSVCGSIHDVQKVFDECPHRDLVSWTTLIQAFTKAGLYS 194
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD--YVSSV 245
++++ F M L D TLV ++S L++GQ +H + ++ D +V +
Sbjct: 195 RAVEAFMEMCDLRLRADGRTLVVVLSACSNLGDLNLGQKVHSY-IRHYIDMKADVFVGNA 253
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MY +C+ +NSAY VF+ + ++VTW+A+I+G + QG Y +AL FR + +G K D
Sbjct: 254 LLDMYLKCDDLNSAYKVFDEMPVKNVVTWNAMISGLAYQGRYREALDTFRMMQDKGVKPD 313
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V + VL + A + G +H Y+ ++ V +AL+DMY+KCG + +VFE
Sbjct: 314 EVTLVGVLNSCANLGVLEIGKWVHAYMRRNHILADKFVGNALLDMYAKCGSIDEAFRVFE 373
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+M R++ +Y ++I GL LHG AF+ F ++ G+ P+E TF LL AC HGGLV +
Sbjct: 374 SMKRRDVYSYTAMIFGLALHGEANWAFQVFSEMFRVGIEPNEVTFLGLLMACSHGGLVAE 433
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G++ F +M+++Y ++ + EHY M+ LLG AG ++EA I + D GALL C
Sbjct: 434 GKKYFFQMSDKYKLRPQAEHYGCMIDLLGRAGLVKEAEEIIHKMEIRPDVFACGALLGAC 493
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+GN D+ E V +L E DP + ++++N Y+ RW D +K+R + + +RK G
Sbjct: 494 RIHGNVDIGESVMQKLTELDPDEEGTYILMTNLYSSVHRWKDALKIRKTMKNKKMRKTPG 553
Query: 546 VSWVS 550
S +
Sbjct: 554 CSLIE 558
>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
Length = 863
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 276/536 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ ++LHA K D T +V +YA N L AR F P +V N+++
Sbjct: 266 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 325
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
A +A LF+ ++R+ ++ D + + + AC+E + VH AI SG D
Sbjct: 326 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 385
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++A++ Y K + EA +F G+ D V N++I+ G +D ++ F+ MLR
Sbjct: 386 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 445
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD++T ++ L G +H +KS S +V+S +V MY +C ++
Sbjct: 446 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 505
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A + + + +V+W+A+++G+S + +A +F ++ G K D A+VL A
Sbjct: 506 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 565
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IHG +I+ +SS LVDMY+KCG + + VFE + +R+ +++N++
Sbjct: 566 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAM 625
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G LHG +A F + ++ + P+ +TF A+L AC H GL +DG F MT Y
Sbjct: 626 ICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYK 685
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
++ + EH+ MV +LG + +EA FI S+P D + LLS C I + ++AE+ A
Sbjct: 686 LEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAA 745
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
+ DP + ++LSN YAE G+W DV + R + L+KE G SW+ S
Sbjct: 746 SNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 801
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 210/429 (48%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L+ + + LS ++HAL K L D + LV +Y L A F P+R
Sbjct: 154 VLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER 213
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W + I ++ LF + R L +YA R+C+ S L R +H
Sbjct: 214 NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLH 273
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
AI + D + +A+V Y+K + + +A + F G+ + + N+M+ G G
Sbjct: 274 AHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGI 333
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ LF +M+R D +L G+ S E GQ +H +KS FD V++ ++
Sbjct: 334 EAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVL 393
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+Y +C + AY +F + D V+W+A+I Q G Y + +F ++ G K D
Sbjct: 394 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDF 453
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SVL A A ++ G ++H VI+ G V+S +VDMY KCG + ++ + +
Sbjct: 454 TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 513
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++++N+++ G L+ + +A +FF ++++ GL PD TF+ +L C + + G+
Sbjct: 514 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573
Query: 428 EIFTRMTEE 436
+I ++ ++
Sbjct: 574 QIHGQIIKQ 582
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 190/382 (49%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD ++ Y+ + +A LFD P V WN+++ Y F ++ LF +
Sbjct: 81 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 140
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R + PD T+A + ++CS +L VH A+ +GL D T SALV Y K +
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 200
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+A+ F G+ + + V + I+G + + L+LF M RLG + +
Sbjct: 201 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 260
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S L+ G+ +H +K+ F S V + +V +YA+ N + A F L + + T +
Sbjct: 261 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSN 320
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A++ G + G +A+ F+ + + D V ++ V +A A++ + G +H I+
Sbjct: 321 AMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 380
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
GF++ + V++A++D+Y KC L +F+ M +++ +++N++I L +G F
Sbjct: 381 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 440
Query: 396 RDIIEKGLNPDESTFSALLCAC 417
+++ G+ PD+ T+ ++L AC
Sbjct: 441 NEMLRFGMKPDDFTYGSVLKAC 462
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + +SL +H V K+ L D F A+ +V +Y ++ A+ L D+ +
Sbjct: 458 VLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ 517
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN+I+ ++L +A+ F +L LKPD+FT+A + C+ + + + +HG
Sbjct: 518 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 577
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D SS LV Y+K + +++ VF+ V D V N+MI G+A G +
Sbjct: 578 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 637
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG-QGIHGFCLKSSFDSYDYVSSVLV 247
+L++F+ M + P+ T V ++ L G + H + + +V
Sbjct: 638 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 697
Query: 248 SMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
+ R A NS+ F D V W L++
Sbjct: 698 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 730
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 138/330 (41%), Gaps = 31/330 (9%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC------- 183
+VSG + S+ L+ Y++ + A +VFD + D V N+M++ ++H
Sbjct: 44 VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 103
Query: 184 ------------------------GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
G + +S+ LF M R G +PD T L+
Sbjct: 104 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 163
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
LS+G +H +K+ + S LV MY +C ++ A F + + V+W A I
Sbjct: 164 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 223
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G Q Y + L F ++ G AS + A + + G +H + I++ F
Sbjct: 224 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 283
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+V +A+VD+Y+K L + F + + T N++++GL G +A F+ +I
Sbjct: 284 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 343
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ D + S + AC G+++
Sbjct: 344 RSSIRFDVVSLSGVFSACAETKGYFQGQQV 373
>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 1724
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 283/556 (50%), Gaps = 13/556 (2%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
+L+ +L+L ++ + +H + D TKL+ Y + +AR +FD
Sbjct: 31 SLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDG 90
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P+RSV W +++ Y+ RF A LF ++ +K + FTY RAC+ L
Sbjct: 91 MPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTS------L 144
Query: 124 RFVHGGAIVSGL---GR---DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
R + G V G GR + SALV +SK +++A +F + + D+V N+MI
Sbjct: 145 RCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMI 204
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G+A GF D S +F MLR G PD YTL ++ E L + IHG + +
Sbjct: 205 GGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYG 264
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRK 296
SYD V+ +L++ YA+ + SA + + DL + +ALITGY+ +G Y AL F++
Sbjct: 265 SYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKE 324
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+N D V++ S+L A A+ G IH + +++ V + +AL+DMY+K G
Sbjct: 325 MNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGE 384
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ + F+ M E+N+I++ S+I G HG+ + A ++ + KG P++ TF +LL A
Sbjct: 385 IEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFA 444
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C H GL +G E F M +Y I+ + EHY MV L G LEEAY+ + + + +
Sbjct: 445 CSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNAS 504
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
+ GA+L IYG L + A LF P V+L++ Y+ G WDD K+R +
Sbjct: 505 LWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLME 564
Query: 537 DNGLRKEAGVSWVSGS 552
+ +K AG S+ +
Sbjct: 565 ERSTKKNAGYSFFQAT 580
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 272/528 (51%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H LV K L + L+ LY+ A ++F +R + WNS++ Y
Sbjct: 1068 RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQD 1127
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ D + LL+ ++ T+A ACS L + VH IV+G I
Sbjct: 1128 GKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVG 1187
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALVT Y KL ++ EA KV + PD V N++I G A +++++ + + G
Sbjct: 1188 NALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIP 1247
Query: 203 PDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ T+V ++ P LL G IH + + F+S DYV + L++MYA+C +NS+ +
Sbjct: 1248 ANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNY 1307
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+ L + +TW+A++ + G +AL F ++ G D + LAA A A
Sbjct: 1308 IFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV 1367
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +HG VI+ GFE + V++A +DMY KCG + +++ R+ +++N +I
Sbjct: 1368 LEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISA 1427
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG +A E F ++++ G PD TF +LL AC HGGLV++G + MT E+G+
Sbjct: 1428 FARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFP 1487
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EH + ++ LLG +G L A FI +P P + +LL+ C I+GN +LA A L
Sbjct: 1488 GIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHL 1547
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E DP + V+ SN A G+W+DV LR ++ N ++K+ SWV
Sbjct: 1548 LELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWV 1595
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 207/415 (49%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + L+ S+S ++H V K +L D + T LV Y ++ +A+ LF+
Sbjct: 846 FMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFE 905
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P +V W S++ Y+ + + ++++ + + + + T+A +T +C D
Sbjct: 906 EMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL 965
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
V G I G +++L++ +S S ++EA VFD +++ D++ N+MIS +AH
Sbjct: 966 GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAH 1025
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +SL+ F WM L + TL L+S L G+GIHG +K DS +
Sbjct: 1026 HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 1085
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+++Y+ A VF ++ DL++W++++ Y Q G L +L GK
Sbjct: 1086 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 1145
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V AS LAA + + ++H +I GF ++V +ALV MY K G + +
Sbjct: 1146 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 1205
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
V +TM + + +T+N++I G + +A + ++ I EKG+ + T ++L AC
Sbjct: 1206 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGAC 1260
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 215/435 (49%), Gaps = 5/435 (1%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
A L+ +++ + + A +FD + + WN++I AYA ++ F +
Sbjct: 985 ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 1044
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+ ++ T + + CS +L R +HG + GL + + L+T YS+ ++A
Sbjct: 1045 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 1104
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VF +++ DL+ NSM++ + G L++ +L++GK + T ++ P
Sbjct: 1105 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 1164
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L + +H + + F + V + LV+MY + M A V ++ PD VTW+ALI G
Sbjct: 1165 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 1224
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFEL 339
+++ + +A+ ++ + +G A+ + + SVL A + ++ G IH +++ GFE
Sbjct: 1225 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 1284
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
V ++L+ MY+KCG L +F+ + ++ IT+N+++ HG +A + F ++
Sbjct: 1285 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 1344
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+N D+ +FS L A + ++ +G+++ + + G ++ + + G G
Sbjct: 1345 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHG-LVIKLGFESDLHVTNAAMDMYGKCG-- 1401
Query: 460 EEAYSFIWSLPKPVD 474
E + + LP+P++
Sbjct: 1402 -EMHDVLKMLPQPIN 1415
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 224/457 (49%), Gaps = 14/457 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LHA S+ F L+ +Y+ + AR +FD+ R+ W++++ Y
Sbjct: 764 KALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRV 823
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSIT 141
+ +A LF + ++P+ F A + ACS + + F VHG + +G+ D
Sbjct: 824 GLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYV 883
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ALV Y + L+ A K+F+ + D ++V S++ G++ G + L ++ M + G
Sbjct: 884 GTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 943
Query: 202 TPDEYTLVGLIS--GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
+ ++ T + S GL E +L G + G ++ F+ V++ L+SM++ + + A
Sbjct: 944 SGNQNTFATVTSSCGLLEDQVL--GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 1001
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+VF+ + D+++W+A+I+ Y+ G ++L F + + + ++S+L+ +
Sbjct: 1002 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 1061
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
N+ G IHG V++ G + +V + + L+ +YS+ G VF+ M+ER++I++NS++
Sbjct: 1062 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 1121
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G + ++++ G + TF++ L AC N I +++ I
Sbjct: 1122 ACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS-----NPECLIESKIVHALII 1176
Query: 440 QAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKP 472
A ++ +V + G G + EA + ++P+P
Sbjct: 1177 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQP 1213
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 153/321 (47%), Gaps = 3/321 (0%)
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
T+L P Y I + C + +H I +G G D ++ L+ Y K+ +
Sbjct: 26 TRLDPS--LYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIA 83
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A VFDG+ + +V +M+SG++ G ++K+ LF M G +++T +
Sbjct: 84 ARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTS 143
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
L +G + G K F +V S LV +++C M A ++F ++ D+V+W+A+
Sbjct: 144 LRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAM 203
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I GY+ QG + FR + G D + SVL A+A+ + IHG + Q G+
Sbjct: 204 IGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGY 263
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG-FTYQAFEFFR 396
+V+ L++ Y+K G L + + M ++++ + ++I G G ++ A + F+
Sbjct: 264 GSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFK 323
Query: 397 DIIEKGLNPDESTFSALLCAC 417
++ + + D+ ++L C
Sbjct: 324 EMNQMNIGMDDVILCSMLNIC 344
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 136/255 (53%), Gaps = 8/255 (3%)
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+ G E + G+ +H FC+ S + + ++ L++MY++ + A +VF+ + H +
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW-PGAVIHG 330
+WS +++GY + G Y +A+ F ++ G + + ++AS++ A ++S + G +HG
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
+V++ G V V +ALV Y G + ++FE M + N++++ S+++G G +
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 930
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND---GREIFTRMTEEYGIQAKTEHYI 447
++ + ++G++ +++TF+ + +C GL+ D G ++ + +YG +
Sbjct: 931 VLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHII-QYGFEDSVSVAN 986
Query: 448 YMVKLLGLAGNLEEA 462
++ + ++EEA
Sbjct: 987 SLISMFSSFSSVEEA 1001
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 65/132 (49%)
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
+ G+ + L+ + DP L +L G +IH ++I +GF + +++
Sbjct: 10 NLGRLAEALKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLHLNT 69
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
L+ Y K G + VF+ M ER+++++ +++ G +G +AF F D+ G+
Sbjct: 70 KLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKA 129
Query: 406 DESTFSALLCAC 417
++ T+ + L AC
Sbjct: 130 NQFTYGSALRAC 141
>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 933
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 164/533 (30%), Positives = 284/533 (53%), Gaps = 4/533 (0%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
SR K +H + K DPF A LV +YA L A +F+K Q + WN++I
Sbjct: 275 SRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGC 334
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
L A L + R+ + P+ FT + +AC+ R +H + + D
Sbjct: 335 VLHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDL 394
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD--KSLQLFDWML 197
S LV YSK L+++A F+ + + DL+ N++ISG++ +W+ ++L LF M
Sbjct: 395 FVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ--YWEDMEALSLFVEMH 452
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G ++ TL ++ ++ V + +HG +KS F S YV + L+ Y +C+ +
Sbjct: 453 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 512
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F DLV+++++IT Y+Q G +AL F ++ K D + +S+L A A
Sbjct: 513 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA 572
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G +H +++++GF L + ++LV+MY+KCG + + F ++ER I+++++
Sbjct: 573 NLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSA 632
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I GL HG QA + F ++++G++P+ T ++L AC H GLV + + F M E +
Sbjct: 633 MIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELF 692
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G + EHY M+ LLG AG + EA + +P + +V GALL I+ + +L
Sbjct: 693 GFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRA 752
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A LF +P K V+L+N YA G+W++V ++R + D+ ++KE G+SW+
Sbjct: 753 AEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIE 805
Score = 198 bits (503), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 220/422 (52%), Gaps = 1/422 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L K++H +V + D F A LV +YA + ++ LFD+ P+R+V WN++
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y +A LF ++ + +KP+ F+ + + AC+ D + +HG I G
Sbjct: 231 SCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +++ALV Y+K+ + +AI VF+ + PD+V N++I+G +++L+L M
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R G P+ +TL + L +G+ +H +K +S +VS LV MY++C+ +
Sbjct: 351 KRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 410
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A FN L DL+ W+A+I+GYSQ + +AL F +++ +G + ++++L +
Sbjct: 411 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 470
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A V +HG ++ GF + V ++L+D Y KC ++ ++FE + +++++
Sbjct: 471 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 530
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I +G +A + F ++ + L PD S+LL AC + G+++ + +
Sbjct: 531 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-K 589
Query: 437 YG 438
YG
Sbjct: 590 YG 591
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 142/569 (24%), Positives = 251/569 (44%), Gaps = 45/569 (7%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL ++HA + K+ L DP L+ LY+ AR L D++ + + W+++I
Sbjct: 70 KSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARKLVDESSEPDLVSWSALI 129
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA A F + +K + FT++ + +ACS DL + VHG +VSG
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D ++ LV Y+K ++ ++FD + + ++V N++ S + F +++ LF M
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQIDFCGEAVGLFYEM 249
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+E++L +++ S G+ IHG+ +K +D + ++ LV MYA+ +
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF + PD+V+W+A+I G + +AL ++ G + ++S L A
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRSGICPNIFTLSSALKAC 369
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A G +H +++ E + VS LVDMYSKC L F + E+++I +N
Sbjct: 370 AGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 429
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL-----------CACCHGGLVND 425
++I G + +A F ++ ++G+ +++T S +L C HG V
Sbjct: 430 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 489
Query: 426 GRE----IFTRMTEEYGIQAKTEH---------------YIYMVKLLGLAGNLEEAYSFI 466
G + + + YG + E + M+ G EEA
Sbjct: 490 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 549
Query: 467 WSLP----KPVDPAVSGALLSCCHIYGNSDLAEIVAHQL---FENDPRKGAYKVMLSNTY 519
+ KP S L +C ++ ++ H L F D G L N Y
Sbjct: 550 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS---LVNMY 606
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
A+ G DD + ++ + G+ VSW
Sbjct: 607 AKCGSIDDAGRAFSELTERGI-----VSW 630
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 181/340 (53%), Gaps = 2/340 (0%)
Query: 97 RTQLKPDNFTYA-CITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ P + +Y+ +++ C+ S PGL+ +H SGL D + L+ YSK
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQ-IHAHITKSGLSDDPSIRNHLINLYSKCRNF 107
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A K+ D S+PDLV +++ISG+A G +L F M LG +E+T ++
Sbjct: 108 GYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
L +G+ +HG + S F+ +V++ LV MYA+C+ + +F+ + ++V+W+
Sbjct: 168 SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWN 227
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
AL + Y Q G+A+ F ++ + G K + ++S++ A + G +IHGY+I+
Sbjct: 228 ALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G++ ++ALVDMY+K G L I VFE + + +I+++N+VI G LH QA E
Sbjct: 288 GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+ G+ P+ T S+ L AC GL GR++ + + +
Sbjct: 348 GQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMK 387
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 4/294 (1%)
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
TP + L+S L G IH KS + + L+++Y++C A
Sbjct: 53 TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+ + PDLV+WSALI+GY+Q G G AL F ++++ G K + +SVL A + +
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +HG V+ GFE V V++ LV MY+KC ++F+ + ERN++++N++
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR-EIFTRMTEEYGIQ 440
F +A F +++ G+ P+E + S+++ AC GL + R +I + G
Sbjct: 233 YVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYD 290
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+V + G+L +A S + +P D A+++ C ++ + + A
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQP-DIVSWNAVIAGCVLHEHHEQA 343
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 12/322 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + Q + +++H L K+ D + L+ Y + + A +F++
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 525
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ + S+I AYA + +A LF + +LKPD F + + AC+ S + +H
Sbjct: 526 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 585
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G D ++LV Y+K ID+A + F +++ +V ++MI G A G +
Sbjct: 586 HILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQ 645
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+LQLF+ ML+ G +P+ TLV ++ +GL + L F K + Y
Sbjct: 646 ALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHY---- 701
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY--GKALYYFRKLNMQ 300
+ ++ + R +N A + N + F + W AL+ D G+ +
Sbjct: 702 ACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEP 761
Query: 301 GKKADPVLIASVLAAAAKSANV 322
K VL+A++ A+A K NV
Sbjct: 762 EKSGTHVLLANIYASAGKWENV 783
>gi|449433319|ref|XP_004134445.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Cucumis sativus]
Length = 606
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 285/552 (51%), Gaps = 18/552 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYA---TKLVRLYALNNVLPSARILFDKTP 65
V+EL+ S +S + HA + K L+ PF A LV +YA + L SA+++ + P
Sbjct: 12 VVELAVSVRSSLLGRAAHAQILKT--LKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAP 69
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
RSV W ++I F A F ++L ++P++FT+ C+ +A + GLR
Sbjct: 70 CRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKAST------GLRM 123
Query: 126 ------VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+H A+ GL D ++ YSKL +++A KVFD + +L N+ IS
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
G + S+ F +LR+G PD T ++ + L G +HGF ++S +
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCAFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
VS+ L+ Y +C + + VF+ + + V+WS+LI Y Q + KA F +
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARK 303
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+ + +++SVL A A + + G + ++ E ++ V+SALVDMY KCG +
Sbjct: 304 EDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDN 363
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACC 418
Q F M ERN++++N+++ G G +A ++ G+ P + L AC
Sbjct: 364 AEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACS 423
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
G + G +IF M E YG++ EHY +V LLG AG +E AY FI +P P ++
Sbjct: 424 RAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIW 483
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
GALL C ++G +L ++ A +LFE DP+ V+LSN +A GRW++V +R+++ +
Sbjct: 484 GALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEV 543
Query: 539 GLRKEAGVSWVS 550
G++K AG SW++
Sbjct: 544 GIKKGAGFSWIT 555
>gi|449529626|ref|XP_004171799.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g04860-like [Cucumis sativus]
Length = 704
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 286/535 (53%), Gaps = 6/535 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
+ Q + K +H L KA L D LV +Y L ++LF + ++SV WN+
Sbjct: 176 TQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNT 235
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I A+ F++A +FK +L + ++ T I A + +H A G
Sbjct: 236 MIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANTG------CIHCYATKIG 289
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L + ++LV +Y K I+ A ++ +LV ++IS +A G ++L+
Sbjct: 290 LVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAIISHYAEKGDMGSVVRLYS 349
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ L D +VG+I G P + +G HG+ +KS V++ +SMY++ +
Sbjct: 350 IVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLIIDCLVANGFISMYSKFD 409
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+++ + +F + L +W+++I+ +Q G A+ F ++ + G D + +AS+L+
Sbjct: 410 NIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQMTLSGYGPDSITLASLLS 469
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A ++ N+ G ++H Y++++ +L V +ALVDMY KCG + VF++M E + +
Sbjct: 470 ACCQNGNLHFGEILHCYILRNNLDLEGFVGTALVDMYVKCGRMDFAENVFKSMKEPCLAS 529
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS+I G GL GF A + +++EKG+ P++ TFS +L AC HGGLV +GR+ F M
Sbjct: 530 WNSLISGYGLFGFHNHALLCYTEMMEKGIKPNKITFSGILAACTHGGLVEEGRKYFKIMK 589
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+++GI +++H MV +LG AG EEA FI ++ D AV GALLS C I+ L
Sbjct: 590 KKFGIVPESQHCASMVGMLGRAGLFEEAIVFIQNMETNPDSAVWGALLSACCIHQEVKLG 649
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E VA +LF ++ G + V++SN YA RW+DV ++R + + G +GVS V
Sbjct: 650 ESVAKKLFFSNCSNGGFFVLMSNLYAASRRWNDVARIRKMMREMGEDGCSGVSLV 704
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 178/389 (45%), Gaps = 6/389 (1%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ +T + LY+ + +A+ LFD P++ V WN++I Y +DA LF + R
Sbjct: 99 YVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGNSHDAFKLFVEMRRR 158
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+ P T + +C + +HG + +GL DS +ALV+ Y K + +D
Sbjct: 159 EFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVKAGLDLDSQVKNALVSMYGKCADLDGV 218
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F +++ +V N+MI F G + +++ +F ML + T+V ++S
Sbjct: 219 KLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLVFKQMLEESVNANSVTMVSILSANANT 278
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
IH + K V + LV Y +C + A ++ S +LV +A+I
Sbjct: 279 GC------IHCYATKIGLVENVSVVTSLVCSYVKCGYIELAELIYMSKLKKNLVALTAII 332
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+ Y+++GD G + + + K D V + ++ ++ G HGY ++ G
Sbjct: 333 SHYAEKGDMGSVVRLYSIVQHLDMKLDAVAMVGIIQGFTYPDHIGIGLAFHGYGVKSGLI 392
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ +V++ + MYSK + +F+ M ++ + ++NSVI G + A F +
Sbjct: 393 IDCLVANGFISMYSKFDNIDAVFSLFQEMHKKTLSSWNSVISSCAQAGRSIDAMALFSQM 452
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGR 427
G PD T ++LL ACC G ++ G
Sbjct: 453 TLSGYGPDSITLASLLSACCQNGNLHFGE 481
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 159/326 (48%), Gaps = 21/326 (6%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA-------------- 113
S+ ++S + Y F LF+ LLR ++KP++ T++ + +A
Sbjct: 14 SLTTFHSAFKFYVEGKCFTPPLLLFRELLRHRVKPNDSTFSLLIKAFVVSSSTSSFAPSF 73
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
CSEN + + I G + S+A + YSKL + A ++FD + D+V
Sbjct: 74 CSENEKAEANQ-LQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSW 132
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N++ISG+ CG + +LF M R P + TLV L+ L G+ IHG +K
Sbjct: 133 NALISGYTRCGNSHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSIHGLGVK 192
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ D V + LVSMY +C ++ +F + +V+W+ +I + Q G + +A+
Sbjct: 193 AGLDLDSQVKNALVSMYGKCADLDGVKLLFGEITEKSVVSWNTMIGAFGQNGLFSEAMLV 252
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F+++ + A+ V + S+L+A A + IH Y + G +V V ++LV Y K
Sbjct: 253 FKQMLEESVNANSVTMVSILSANANT------GCIHCYATKIGLVENVSVVTSLVCSYVK 306
Query: 354 CGYLGLGIQVFETMSERNIITYNSVI 379
CGY+ L ++ + ++N++ ++I
Sbjct: 307 CGYIELAELIYMSKLKKNLVALTAII 332
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 60/102 (58%)
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+ + I+ GF+ + VS+A +D+YSK G++ ++F+ E++++++N++I G G
Sbjct: 85 LQTHFIKWGFDQFLYVSTAFLDLYSKLGFVKAAQRLFDDFPEKDVVSWNALISGYTRCGN 144
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ AF+ F ++ + +P + T +L+ +C L G+ I
Sbjct: 145 SHDAFKLFVEMRRREFDPCQRTLVSLMPSCGTQQLFVQGKSI 186
>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 776
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/538 (31%), Positives = 283/538 (52%), Gaps = 31/538 (5%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLF--- 92
RD +++ Y N L AR LF++ P+R V WN+I+ YA +DA+ +F
Sbjct: 119 RDLVSWNVMIKGYVRNRNLGKARELFERMPERDVCSWNTILSGYAQNGCVDDARRVFDRM 178
Query: 93 --KN------LLRTQLKPDNFTYACITRACSENSDLPGLR-----FVHGGAIVSGLG--- 136
KN LL ++ AC+ EN L FV IV
Sbjct: 179 PEKNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVKKKKIVEARQFFD 238
Query: 137 ----RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
RD ++ + ++T Y++ IDEA ++FD D+ +M+SG+ +++ +L
Sbjct: 239 SMKVRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEAREL 298
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
FD M +E + +++G + + + + + + +++ +++ YA+
Sbjct: 299 FDRM----PERNEVSWNAMLAGYVQGERVEMAKELFDVMPCRNVSTWN----TMITGYAQ 350
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C ++ A ++F+ + D V+W+A+I GYSQ G +AL F + +G + + +S
Sbjct: 351 CGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSSFSSA 410
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+ A + G +HG +++ G+E V +AL+ MY KCG + +F+ M+ ++I
Sbjct: 411 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 470
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++N++I G HGF +A FF + +GL PD++T A+L AC H GLV+ GR+ F
Sbjct: 471 VSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHT 530
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
MT++YG++ ++HY MV LLG AG LEEA++ + ++P D A+ G LL ++GN++
Sbjct: 531 MTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVHGNTE 590
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
LAE A ++F +P V+LSN YA GRW DV KLR + D G++K G SW+
Sbjct: 591 LAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 648
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 174/389 (44%), Gaps = 26/389 (6%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+RD ++ YA N + AR LFD++P VF W +++ Y +A+ LF
Sbjct: 242 VRDVVSWNTIITGYAQNGEIDEARQLFDESPVHDVFTWTAMVSGYIQNRMVEEARELFDR 301
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG-------RDSITSSALVT 147
+ P+ S N+ L G +V G + R+ T + ++T
Sbjct: 302 M------PER-------NEVSWNAMLAG--YVQGERVEMAKELFDVMPCRNVSTWNTMIT 346
Query: 148 AYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT 207
Y++ I EA +FD + D V +MI+G++ G ++L+LF M R G + +
Sbjct: 347 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGGRLNRSS 406
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
+S + L +G+ +HG +K +++ +V + L+ MY +C + A +F +
Sbjct: 407 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 466
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG-A 326
D+V+W+ +I GYS+ G +AL +F + +G K D + +VL+A + + V G
Sbjct: 467 GKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 526
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLH 385
H +G + + +VD+ + G L + + M E + + +++ +H
Sbjct: 527 YFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLLGASRVH 586
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G T A I + P+ S LL
Sbjct: 587 GNTELAETAADKIF--AMEPENSGMYVLL 613
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 2/162 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K+LH + K F L+ +Y + A LF + + + WN++I
Sbjct: 419 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 478
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
Y+ +A F+++ R LKPD+ T + ACS + G ++ H G+
Sbjct: 479 GYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFHTMTQDYGVR 538
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMI 177
+S + +V + L++EA + + +PD + +++
Sbjct: 539 PNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580
>gi|297740529|emb|CBI30711.3| unnamed protein product [Vitis vinifera]
Length = 697
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 171/542 (31%), Positives = 270/542 (49%), Gaps = 79/542 (14%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L +S+ + +H+++ + D +KLV +Y L R +FDK
Sbjct: 107 VLQLCADLKSIQDGRRIHSIIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEK 166
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
VFLWN ++ YA F ++ SLFK + G+R V
Sbjct: 167 VFLWNLLMNGYAKIGNFRESLSLFKRMREL-----------------------GIRRV-- 201
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ A K+FD + D D++ NSMISG+ G +K
Sbjct: 202 ---------------------------ESARKLFDELGDRDVISWNSMISGYVSNGLSEK 234
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L LF+ ML LG D T+V + L ++ L+
Sbjct: 235 GLDLFEQMLLLGINTDLATMVSVELTL---------------------------NNCLLD 267
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++ +NSA VF ++ +V+W+++I GY+++G ++ F ++ + + +
Sbjct: 268 MYSKSGNLNSAIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEDLFPNSIT 327
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+A +L A A A + G IHG+++++GF L V++ALVDMY KCG LGL +F+ +
Sbjct: 328 MACILPACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP 387
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E++++++ +I G G+HG+ +A F ++ G+ PDE +F ++L AC H GL+++G
Sbjct: 388 EKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLDEGWG 447
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M I+ K+EHY +V LL AGNL +AY FI +P D + GALL C IY
Sbjct: 448 FFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIKMMPIEPDATIWGALLCGCRIY 507
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ LAE VA +FE +P Y V+L+N YAE +W++V KLR+ I GLRK G SW
Sbjct: 508 HDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEEVKKLRERIGRRGLRKNPGCSW 567
Query: 549 VS 550
+
Sbjct: 568 IE 569
>gi|242092246|ref|XP_002436613.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
gi|241914836|gb|EER87980.1| hypothetical protein SORBIDRAFT_10g005800 [Sorghum bicolor]
Length = 683
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 158/513 (30%), Positives = 272/513 (53%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F LV +YA L AR +F++ P R+V W S++ D LF +
Sbjct: 166 DGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQNGFAADGLLLFNKMR 225
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ + P +T A + ACS L R++HG I GL +S S+AL+ Y K ++
Sbjct: 226 QDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFISAALLDMYVKCGELE 285
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A VFD +S DLVL +MI G+ G +L+LF P+ T+ ++S
Sbjct: 286 DAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANIVPNSVTIATVLSASA 345
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ LS+G+ IHG +K Y V + LV MYA+C ++ A +F S+ + D+V W++
Sbjct: 346 QLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANRIFGSISNKDVVAWNS 405
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+++GY++ AL F++++++G D + + L+A+ ++ G HGY ++H
Sbjct: 406 MLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGDLLIGKSFHGYAVKHA 465
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
F ++ VS+AL+++Y+KCG L +VF+ M++RN +T+ ++I G G+ G + + + F
Sbjct: 466 FLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQGDSAGSIDLFG 525
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
++++ G++P++ F+++L C H G+V + F M + + I +HY MV +L A
Sbjct: 526 EMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKHYACMVDVLARA 585
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
GNLEEA FI ++P D +V GA L C ++ E ++ P + V++S
Sbjct: 586 GNLEEALEFIDNMPMQADTSVWGAFLHGCELHSRLQFGEEAIKRMMVLHPERPDLYVLIS 645
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N Y +G W+ +R + + GL K G S +
Sbjct: 646 NLYTSNGMWEKSQAIRRWMQEKGLVKLPGYSSI 678
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/422 (30%), Positives = 213/422 (50%), Gaps = 8/422 (1%)
Query: 9 VLELSKSHQSLSRTKELHA--LVAKASLLRDPFYA-TKLVRLYALNNVLPSARILFDKTP 65
+L L S +L + LHA L LL A TKL+ YA L SAR++FD TP
Sbjct: 32 LLRLLPSCGTLPSLRVLHARLLTHTQGLLLGSLRARTKLLSCYAALGDLASARMVFDGTP 91
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP---DNFTYACITRACSENSDLPG 122
+ + + ++ A R +A +L +++ R + P D+F + +AC ++D
Sbjct: 92 RPDAYSYGVMLWCLVQAERHAEAVALHQDMRRRRPCPEAQDDFVLSLALKACIRSADYGY 151
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+H A+ G G D ++LV Y+K ++ A KVF+ + ++V SM+SG
Sbjct: 152 GTRLHCDAVKVG-GADGFVMNSLVDMYAKAGDLECARKVFERIPGRNVVSWTSMLSGCVQ 210
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
GF L LF+ M + P EYT+ +I+ L G+ +HG +K S ++
Sbjct: 211 NGFAADGLLLFNKMRQDNVPPSEYTIATVITACSALIGLHQGRWMHGSVIKQGLMSNSFI 270
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
S+ L+ MY +C + A VF+ L + DLV W+ +I GY+Q G+ AL F
Sbjct: 271 SAALLDMYVKCGELEDAQCVFDELSYIDLVLWTTMIVGYTQNGNPLDALRLFLDKKFANI 330
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V IA+VL+A+A+ ++ G IHG ++ G +V +ALVDMY+KC + +
Sbjct: 331 VPNSVTIATVLSASAQLRDLSLGRSIHGIAVKLGLVEYTVVVNALVDMYAKCQAVSEANR 390
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE-STFSALLCACCHGG 421
+F ++S ++++ +NS++ G + A F+ + KG +PD S AL + C G
Sbjct: 391 IFGSISNKDVVAWNSMLSGYAENNMCNDALMLFKQMSLKGPSPDAISVVHALSASVCLGD 450
Query: 422 LV 423
L+
Sbjct: 451 LL 452
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 12/206 (5%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K H K + L + + +T L+ LY LPSAR +FD+ R+ W ++I Y +
Sbjct: 455 KSFHGYAVKHAFLSNIYVSTALLNLYNKCGDLPSARRVFDEMNDRNSVTWCAMIGGYGMQ 514
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFVHGGAIVSGLGRDSIT 141
+ LF +L+ + P++ + I CS + R+ A +
Sbjct: 515 GDSAGSIDLFGEMLKDGVHPNDVAFTSILSTCSHTGMVTAAKRYFDSMAQHFNITPSMKH 574
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD-----WM 196
+ +V ++ ++EA++ D + + S+ F H LQ + M
Sbjct: 575 YACMVDVLARAGNLEEALEFIDNMP---MQADTSVWGAFLHGCELHSRLQFGEEAIKRMM 631
Query: 197 LRLGKTPDEYTLVGLI---SGLWEPS 219
+ + PD Y L+ + +G+WE S
Sbjct: 632 VLHPERPDLYVLISNLYTSNGMWEKS 657
>gi|224098357|ref|XP_002311156.1| predicted protein [Populus trichocarpa]
gi|222850976|gb|EEE88523.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 285 bits (729), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 275/534 (51%), Gaps = 1/534 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L R E+H + + D AT ++ +YA + +A+ LF + R + W++II
Sbjct: 2 RALGRGTEIHDFARQQGIDSDVAVATPIMTMYARCGEVDTAKQLFQEIKGRDLVAWSAII 61
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A+ + +A SLF+++ L+ + AC+E S L + +H A+ + +
Sbjct: 62 AAFVQSGYPQEALSLFRSMQNEGLQANKVILLSSLPACAEVSSLKLGKSMHCCAVKANVD 121
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +ALV+ Y+K A+ +F+ + D+V N+MI+G+A G +L++F +
Sbjct: 122 LDISVGTALVSMYAKCGFFALALTLFNRMPCKDVVTWNAMINGYAQIGEPFPALEMFHKL 181
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
P+ T+VGL+ + L G IHG +K F+S +V + L+ MYA+C +
Sbjct: 182 QLSELNPNSGTMVGLLPAFALLNDLDQGSCIHGKIIKCGFESECHVKTALIDMYAKCGSL 241
Query: 257 NSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A +F+ D V+W+ +I GY G A F ++ ++ + + V I +VL A
Sbjct: 242 SGAEFLFHRTGCRKDEVSWNVMIAGYMHSGHAIDAFSAFCQMKLENIQPNIVTIVTVLPA 301
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A + + G +H YVI+ GF+ V + L+DMY+KCG+L ++F M ++ +++
Sbjct: 302 VAHLSALRAGMTLHAYVIRMGFQSKTPVGNCLIDMYAKCGWLDHSEKIFHEMKNKDTVSW 361
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N ++ G +HG A E F + + + D +F +L AC H GL+ +GR+IF M++
Sbjct: 362 NVMLAGYAVHGRGSCAIELFSRMQDSEIRLDSFSFINVLSACRHAGLIGEGRKIFDSMSK 421
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
++ ++ EHY M LLG AG E I S+P D V GALL ++ N LAE
Sbjct: 422 QHQLEPDLEHYACMADLLGRAGLFNEVLDLIKSMPMEPDAGVWGALLGASTMHSNVQLAE 481
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
H L + + + + LSNTYA GRW DV R I GLRK G SWV
Sbjct: 482 FALHHLDKLEHKNLTHYAALSNTYARSGRWADVGNTRSKITKTGLRKSPGYSWV 535
>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
Length = 814
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 171/552 (30%), Positives = 280/552 (50%), Gaps = 25/552 (4%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H + R F L+ +YA L A+ L R + WNS+I +++
Sbjct: 136 KQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQN 194
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI-VSGLGRDSIT 141
RF +A + ++ +KPD T+A + ACS L + +H A+ + +S
Sbjct: 195 ERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFV 254
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLG 200
SALV Y ++ VFD V D + L N+MI+G+A +K+L LF M G
Sbjct: 255 GSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAG 314
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+ T+ ++ +S +GIHG+ +K ++ Y+ + L+ MY+R + ++
Sbjct: 315 LYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSK 374
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA---------------- 304
+F+S+ D+V+W+ +IT Y G AL ++ +K+
Sbjct: 375 RIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKP 434
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ + + +VL A + + G IH Y I++ V V SALVDMY+KCG L L +VF
Sbjct: 435 NSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVF 494
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-----LNPDESTFSALLCACCH 419
+ M RN+IT+N +I+ G+HG ++ E F D++ +G + P E TF AL +C H
Sbjct: 495 DQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSH 554
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS- 478
G+V++G +F +M E+GI+ +HY +V L+G AG +EEAY + ++P D +
Sbjct: 555 SGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAW 614
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
+LL C IY N ++ EI A L + P ++ V+LSN Y+ G WD M LR +
Sbjct: 615 SSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAM 674
Query: 539 GLRKEAGVSWVS 550
G++KE G SW+
Sbjct: 675 GVKKEPGCSWIE 686
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 206/448 (45%), Gaps = 32/448 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAK------ASLLRDPFYATKLVRLYALNNVLPSARILFD 62
VL+ Q L K++HA V K +S+ D LV +Y L A +FD
Sbjct: 16 VLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTID----NTLVNMYGKCGGLGDAYKVFD 71
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ +R WNSII A + A F+ +L +P +FT + ACS G
Sbjct: 72 RITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMALACSNLRKRDG 131
Query: 123 L---RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L + +HG G R + +++AL+ Y+KL +D+A + D DLV NSMIS
Sbjct: 132 LWLGKQIHGCCFRKGHWR-TFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISS 190
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-SFDS 238
F+ + ++L M+ G PD T ++ LL G+ IH + L++
Sbjct: 191 FSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIE 250
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+V S LV MY C + S VF+S+ + W+A+I GY+Q KAL F ++
Sbjct: 251 NSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEME 310
Query: 299 -MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G ++ ++S++ A + + IHGYVI+ G E + + +AL+DMYS+ G +
Sbjct: 311 AAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDI 370
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD---IIEKG------------ 402
++F++M +R+I+++N++I + G + A + I EK
Sbjct: 371 KTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQV 430
Query: 403 -LNPDESTFSALLCACCHGGLVNDGREI 429
P+ T +L C + G+EI
Sbjct: 431 PFKPNSITLMTVLPGCASLSALAKGKEI 458
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 168/334 (50%), Gaps = 18/334 (5%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR-DSIT-SSALVTAYSKL 152
++ + PDNF + + +A + +L + +H G G S+T + LV Y K
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL- 211
+ +A KVFD +++ D V NS+IS W+ +++ F ML G P +TLV +
Sbjct: 61 GGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSMA 120
Query: 212 --ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
S L + L +G+ IHG C + + ++ L++MYA+ ++ A +
Sbjct: 121 LACSNLRKRDGLWLGKQIHGCCFRKGH-WRTFSNNALMAMYAKLGRLDDAKSLLVLFEDR 179
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
DLVTW+++I+ +SQ + +AL + R + ++G K D V ASVL A + + G IH
Sbjct: 180 DLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIH 239
Query: 330 GY------VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
Y VI++ F V SALVDMY CG + G VF+++ +R I +N++I G
Sbjct: 240 AYALRTDDVIENSF-----VGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYA 294
Query: 384 LHGFTYQAFEFFRDI-IEKGLNPDESTFSALLCA 416
+A F ++ GL + +T S+++ A
Sbjct: 295 QSEHDEKALMLFIEMEAAAGLYSNATTMSSIVPA 328
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 142/354 (40%), Gaps = 70/354 (19%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ +SR + +H V K L + + L+ +Y+ + +++ +FD R + WN+II
Sbjct: 333 EGISRKEGIHGYVIKRGLETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTII 392
Query: 77 RAYALAHRFNDAKSLFKNLLRTQ----------------LKPDNFTYACITRACSENSDL 120
+Y + R +DA L + R + KP++ T + C+ S L
Sbjct: 393 TSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSAL 452
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+ +H AI + L SALV Y+K ++ A +VFD + +++ N +I +
Sbjct: 453 AKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAY 512
Query: 181 AHCGFWDKSLQLFDWMLRLGK-----TPDEYTLVGLISGLWEPSLLSVGQGI-------H 228
G +SL+LF+ M+ G P E T + L + ++ G + H
Sbjct: 513 GMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEH 572
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL---------------------- 266
G ++ + D Y + +V + R + AY + N++
Sbjct: 573 G--IEPAPDHY----ACIVDLVGRAGKVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHN 626
Query: 267 -------------FHPDLVTWSALITG-YSQQGDYGKALYYFRKLNMQGKKADP 306
PD+ + L++ YS G + KA+ R++ G K +P
Sbjct: 627 IEIGEIAAENLLQLQPDVASHYVLLSNIYSSAGLWDKAMNLRRRMKAMGVKKEP 680
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 17/184 (9%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L++ KE+HA + L + LV +YA L AR +FD+ P R+
Sbjct: 442 VLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRN 501
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRT-----QLKPDNFTYACITRACSENSDL-PG 122
V WN II AY + + ++ LF++++ ++KP T+ + +CS + + G
Sbjct: 502 VITWNVIIMAYGMHGKGKESLELFEDMVAEGAKGGEVKPTEVTFIALFASCSHSGMVDEG 561
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
L H G+ + +V + ++EA L N+M SGF
Sbjct: 562 LSLFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEAYG-----------LVNTMPSGFDK 610
Query: 183 CGFW 186
G W
Sbjct: 611 VGAW 614
>gi|224137486|ref|XP_002327138.1| predicted protein [Populus trichocarpa]
gi|222835453|gb|EEE73888.1| predicted protein [Populus trichocarpa]
Length = 601
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 291/530 (54%), Gaps = 6/530 (1%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ + +H K + D L +YA + L +A +LF++ +SV WN++I AYA
Sbjct: 59 QGRSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYA 118
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
FN++ +FK ++ +++ + T + A + P L +H AI +GL +
Sbjct: 119 GNGFFNESMLVFKRMVEQKVEVNPVTIMSLLPA----NISPEL--IHCYAIKTGLINNGS 172
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++LV Y+K + A ++ +LV ++IS +A G D ++ F M +L
Sbjct: 173 VVTSLVCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLD 232
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D +V ++ G+ +PS +S+G +HG+ LK+ D+++ VS+ L+SMY + N + +A
Sbjct: 233 MKLDSVAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAI 292
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F + L++W+++I+G Q G A+ +F ++ M G D + +AS+L ++
Sbjct: 293 SLFYEMPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLG 352
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G +H Y++++ E+ V ++L+DMY+KCG + L +VF+++ E + T+N++I
Sbjct: 353 YLRLGERLHNYILRNNLEVEDFVGTSLIDMYTKCGSILLAERVFKSIREPCVATWNTMIS 412
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +G + A + + E+GL PD TF +L AC HGGL+++G++ F MTEE+G+
Sbjct: 413 GYSWYGLEHNALNCYSKMREQGLEPDRITFLGVLAACIHGGLLHEGKKHFQIMTEEFGMV 472
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+H MV LLG AG EEA FI ++ D AV GALL+ C I+ L E +A +
Sbjct: 473 PNLQHCACMVGLLGRAGLFEEALLFIKNMESEPDSAVWGALLNACCIHQEIKLGECLAKK 532
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L+ D + V++SN YA RW+D K+R+ + D G +GVS +
Sbjct: 533 LYLLDYKNCGLYVLMSNLYAATNRWNDAAKMREIMKDIGGDGTSGVSQIE 582
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 177/363 (48%), Gaps = 6/363 (1%)
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R + WN++I + DA +F LLR P T + +C + R +
Sbjct: 4 RDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRSI 63
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG I +G+ DS +AL Y+K ++ A +F+ + D +V N+MI +A GF+
Sbjct: 64 HGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGFF 123
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++S+ +F M+ + T++ L+ P L IH + +K+ + V + L
Sbjct: 124 NESMLVFKRMVEQKVEVNPVTIMSLLPANISPEL------IHCYAIKTGLINNGSVVTSL 177
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V +YA+C A ++ S +LV+ +A+I+ Y+++G+ + F ++ K D
Sbjct: 178 VCLYAKCGSTELAELLYWSFPQKNLVSLTAIISSYAEKGNMDLVVECFSRMQQLDMKLDS 237
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + S+L +++ G +HGY +++G + +VS+ L+ MY K + I +F
Sbjct: 238 VAMVSILHGITDPSHMSIGIALHGYALKNGLDTHNLVSNGLISMYFKFNDIEAAISLFYE 297
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M E+ +I++NSVI G G A +FF + GL+PD T ++LL C G + G
Sbjct: 298 MPEKPLISWNSVISGCVQAGRASDAMKFFCQMKMFGLSPDTITVASLLTGCSQLGYLRLG 357
Query: 427 REI 429
+
Sbjct: 358 ERL 360
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 117/213 (54%), Gaps = 6/213 (2%)
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
D D+V N++I G + G+ +L++F +LR G +P + TLVGL+ + G+
Sbjct: 3 DRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQGRS 62
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IHGF +K+ D V + L MYA+ + +A +F L +V+W+ +I Y+ G
Sbjct: 63 IHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGNGF 122
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ +++ F+++ Q + +PV I S+L AN+ P +IH Y I+ G + V ++
Sbjct: 123 FNESMLVFKRMVEQKVEVNPVTIMSLLP-----ANISP-ELIHCYAIKTGLINNGSVVTS 176
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
LV +Y+KCG L ++ + ++N+++ ++I
Sbjct: 177 LVCLYAKCGSTELAELLYWSFPQKNLVSLTAII 209
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 28/238 (11%)
Query: 266 LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG 325
+ D+V+W+ALI G S+ G AL F +L +G + ++ + + V+ G
Sbjct: 1 MLDRDIVSWNALICGCSRNGYDVDALEIFVQLLREGFSPLQTTLVGLVPSCGRREFVFQG 60
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
IHG+ I+ G +L V +AL MY+K G L +FE + +++++++N++I +
Sbjct: 61 RSIHGFGIKTGIDLDSQVKNALTYMYAKSGDLEAAELLFEELEDKSVVSWNTMIGAYAGN 120
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALL----------CACCHGGLVNDGREIFTRMTE 435
GF ++ F+ ++E+ + + T +LL C GL+N+G + +
Sbjct: 121 GFFNESMLVFKRMVEQKVEVNPVTIMSLLPANISPELIHCYAIKTGLINNGSVVTS---- 176
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+V L G+ E A WS P+ +++ A++S GN DL
Sbjct: 177 -------------LVCLYAKCGSTELAELLYWSFPQKNLVSLT-AIISSYAEKGNMDL 220
>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 905
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 276/536 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ ++LHA K D T +V +YA N L AR F P +V N+++
Sbjct: 308 LNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVG 367
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
A +A LF+ ++R+ ++ D + + + AC+E + VH AI SG D
Sbjct: 368 LVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVD 427
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++A++ Y K + EA +F G+ D V N++I+ G +D ++ F+ MLR
Sbjct: 428 ICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLR 487
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD++T ++ L G +H +KS S +V+S +V MY +C ++
Sbjct: 488 FGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDE 547
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A + + + +V+W+A+++G+S + +A +F ++ G K D A+VL A
Sbjct: 548 AQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCAN 607
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IHG +I+ +SS LVDMY+KCG + + VFE + +R+ +++N++
Sbjct: 608 LATIELGKQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAM 667
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G LHG +A F + ++ + P+ +TF A+L AC H GL +DG F MT Y
Sbjct: 668 ICGYALHGLGVEALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYK 727
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
++ + EH+ MV +LG + +EA FI S+P D + LLS C I + ++AE+ A
Sbjct: 728 LEPQLEHFACMVDILGRSKGPQEAVKFINSMPFQADAVIWKTLLSICKIRQDVEIAELAA 787
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
+ DP + ++LSN YAE G+W DV + R + L+KE G SW+ S
Sbjct: 788 SNVLLLDPDDSSVYILLSNVYAESGKWADVSRTRRLLKQGRLKKEPGCSWIEVQSE 843
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 114/429 (26%), Positives = 210/429 (48%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L+ + + LS ++HAL K L D + LV +Y L A F P+R
Sbjct: 196 VLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPER 255
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W + I ++ LF + R L +YA R+C+ S L R +H
Sbjct: 256 NWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLH 315
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
AI + D + +A+V Y+K + + +A + F G+ + + N+M+ G G
Sbjct: 316 AHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGI 375
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ LF +M+R D +L G+ S E GQ +H +KS FD V++ ++
Sbjct: 376 EAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVL 435
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+Y +C + AY +F + D V+W+A+I Q G Y + +F ++ G K D
Sbjct: 436 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDF 495
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SVL A A ++ G ++H VI+ G V+S +VDMY KCG + ++ + +
Sbjct: 496 TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 555
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++++N+++ G L+ + +A +FF ++++ GL PD TF+ +L C + + G+
Sbjct: 556 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 615
Query: 428 EIFTRMTEE 436
+I ++ ++
Sbjct: 616 QIHGQIIKQ 624
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 190/382 (49%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD ++ Y+ + +A LFD P V WN+++ Y F ++ LF +
Sbjct: 123 RDTVSWNTMLTAYSHAGDISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEM 182
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R + PD T+A + ++CS +L VH A+ +GL D T SALV Y K +
Sbjct: 183 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSL 242
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+A+ F G+ + + V + I+G + + L+LF M RLG + +
Sbjct: 243 DDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSC 302
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S L+ G+ +H +K+ F S V + +V +YA+ N + A F L + + T +
Sbjct: 303 AAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSN 362
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A++ G + G +A+ F+ + + D V ++ V +A A++ + G +H I+
Sbjct: 363 AMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKS 422
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
GF++ + V++A++D+Y KC L +F+ M +++ +++N++I L +G F
Sbjct: 423 GFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHF 482
Query: 396 RDIIEKGLNPDESTFSALLCAC 417
+++ G+ PD+ T+ ++L AC
Sbjct: 483 NEMLRFGMKPDDFTYGSVLKAC 504
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 126/273 (46%), Gaps = 2/273 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + +SL +H V K+ L D F A+ +V +Y ++ A+ L D+ +
Sbjct: 500 VLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQ 559
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN+I+ ++L +A+ F +L LKPD+FT+A + C+ + + + +HG
Sbjct: 560 VVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHG 619
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D SS LV Y+K + +++ VF+ V D V N+MI G+A G +
Sbjct: 620 QIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVE 679
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG-QGIHGFCLKSSFDSYDYVSSVLV 247
+L++F+ M + P+ T V ++ L G + H + + +V
Sbjct: 680 ALRMFERMQKENVVPNHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMV 739
Query: 248 SMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
+ R A NS+ F D V W L++
Sbjct: 740 DILGRSKGPQEAVKFINSMPFQADAVIWKTLLS 772
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 138/330 (41%), Gaps = 31/330 (9%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC------- 183
+VSG + S+ L+ Y++ + A +VFD + D V N+M++ ++H
Sbjct: 86 VVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDISTAV 145
Query: 184 ------------------------GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
G + +S+ LF M R G +PD T L+
Sbjct: 146 ALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALE 205
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
LS+G +H +K+ + S LV MY +C ++ A F + + V+W A I
Sbjct: 206 ELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSWGAAIA 265
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G Q Y + L F ++ G AS + A + + G +H + I++ F
Sbjct: 266 GCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIKNKFSS 325
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+V +A+VD+Y+K L + F + + T N++++GL G +A F+ +I
Sbjct: 326 DRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMI 385
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ D + S + AC G+++
Sbjct: 386 RSSIRFDVVSLSGVFSACAETKGYFQGQQV 415
>gi|449523774|ref|XP_004168898.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g14850-like [Cucumis sativus]
Length = 606
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 173/552 (31%), Positives = 285/552 (51%), Gaps = 18/552 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYA---TKLVRLYALNNVLPSARILFDKTP 65
V+EL+ S +S + HA + K L+ PF A LV +YA + L SA+++ + P
Sbjct: 12 VVELAVSVRSSLLGRAAHAQILKT--LKTPFPAFLYNHLVNMYAKLDHLNSAKLILELAP 69
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
RSV W ++I F A F ++L ++P++FT+ C+ +A + GLR
Sbjct: 70 CRSVVTWTALIAGSVQNGCFVSALLHFSDMLSDCVRPNDFTFPCVLKAST------GLRM 123
Query: 126 ------VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+H A+ GL D ++ YSKL +++A KVFD + +L N+ IS
Sbjct: 124 DTTGKQLHALAVKEGLINDVFVGCSVFDMYSKLGFLNDAYKVFDEMPHRNLETWNAYISN 183
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
G + S+ F +LR+G PD T ++ + L G +HGF ++S +
Sbjct: 184 SVLHGRPEDSVIAFIELLRVGGKPDSITFCXFLNACSDKLGLGPGCQLHGFIIRSGYGQN 243
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
VS+ L+ Y +C + + VF+ + + V+WS+LI Y Q + KA F +
Sbjct: 244 VSVSNGLIDFYGKCGEVECSEMVFDRMGERNSVSWSSLIAAYVQNNEEEKASCLFLRARK 303
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+ + +++SVL A A + + G + ++ E ++ V+SALVDMY KCG +
Sbjct: 304 EDIEPTDFMVSSVLCACAGLSEIEFGRSVQALAVKACVEQNIFVASALVDMYGKCGSIDN 363
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACC 418
Q F M ERN++++N+++ G G +A ++ G+ P + L AC
Sbjct: 364 AEQAFNAMPERNLVSWNALLGGYAHQGHANKAVALLEEMTSAAGIVPSYVSLICALSACS 423
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
G + G +IF M E YG++ EHY +V LLG AG +E AY FI +P P ++
Sbjct: 424 RAGDLKTGMKIFESMKERYGVEPGPEHYACLVDLLGRAGMVECAYDFIKRMPFPPTISIW 483
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
GALL C ++G +L ++ A +LFE DP+ V+LSN +A GRW++V +R+++ +
Sbjct: 484 GALLGACRMHGKPELGKLAAEKLFELDPKDSGNHVVLSNMFAATGRWEEVTVVRNEMKEV 543
Query: 539 GLRKEAGVSWVS 550
G++K AG SW++
Sbjct: 544 GIKKGAGFSWIT 555
>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 804
Score = 285 bits (728), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 274/542 (50%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S L+ +E+H V +A L D L+ +YA + AR +FD R
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
W ++ AYA + ++ + +L+ +++P TY + AC + L + +H
Sbjct: 195 EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHA 254
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ S D S+AL Y K +A +VF+ +S D++ N+MI GF G ++
Sbjct: 255 HIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEE 314
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ F ML G PD T ++S P L+ G+ IH K S + L++
Sbjct: 315 AHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVRFGNALIN 374
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++ M A VF+ + D+V+W+ L+ Y+ ++ F+++ QG KA+ +
Sbjct: 375 MYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQGVKANKIT 434
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
VL A + + G IH V++ G + V++AL+ MY KCG + I+VFE MS
Sbjct: 435 YMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS 494
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+++T+N++I GLG +G +A + + + +G+ P+ +TF +L AC LV +GR
Sbjct: 495 MRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRR 554
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M+++YGI +HY MV +L AG+L EA I ++P A+ GALL+ C I+
Sbjct: 555 QFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGALLAACRIH 614
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N ++ E A + +P+ V LS YA G W DV KLR + + G++KE G SW
Sbjct: 615 CNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVKKEPGRSW 674
Query: 549 VS 550
+
Sbjct: 675 IE 676
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 213/419 (50%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L+ K++H + + + + + L++LYA + AR LFDK +SV WN +I
Sbjct: 42 KDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMI 101
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA +A +LF + + +L+PD FT+ I ACS + L R +H + +GL
Sbjct: 102 SGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLA 161
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ +AL++ Y+K + +A +VFD ++ D V ++ +A G+ ++SL+ + M
Sbjct: 162 NDTTVGNALISMYAKCGSVRDARRVFDAMASRDEVSWTTLTGAYAESGYGEESLKTYHAM 221
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
L+ P T + ++S + L G+ IH ++S + S VS+ L MY +C
Sbjct: 222 LQERVRPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYHSDVRVSTALTKMYMKCGAF 281
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF L + D++ W+ +I G+ G +A F ++ +G D +VL+A
Sbjct: 282 KDAREVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSAC 341
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A+ + G IH + G V +AL++MYSK G + QVF+ M +R+++++
Sbjct: 342 ARPGGLARGKEIHARAAKDGLVSDVRFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWT 401
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+++ ++F F+ ++++G+ ++ T+ +L AC + + G+EI + +
Sbjct: 402 TLLGRYADCDQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVK 460
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 200/381 (52%), Gaps = 1/381 (0%)
Query: 91 LFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS 150
+ + L R + D++ Y + ++C + DL + VH + G+ + ++ L+ Y+
Sbjct: 15 VLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYA 74
Query: 151 KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
++EA ++FD S+ +V N MISG+AH G ++ LF M + PD++T V
Sbjct: 75 HCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++S P++L+ G+ IH +++ + V + L+SMYA+C + A VF+++ D
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFDAMASRD 194
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
V+W+ L Y++ G ++L + + + + + +VL+A A + G IH
Sbjct: 195 EVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQIHA 254
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
++++ + V VS+AL MY KCG +VFE +S R++I +N++I G G +
Sbjct: 255 HIVESEYHSDVRVSTALTKMYMKCGAFKDAREVFECLSYRDVIAWNTMIRGFVDSGQLEE 314
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A F ++E+G+ PD +T++ +L AC G + G+EI R ++ G+ + ++
Sbjct: 315 AHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKD-GLVSDVRFGNALI 373
Query: 451 KLLGLAGNLEEAYSFIWSLPK 471
+ AG++++A +PK
Sbjct: 374 NMYSKAGSMKDARQVFDRMPK 394
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 123/250 (49%)
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
W + ++ R G D Y V L+ + L+VG+ +H L+ Y+++
Sbjct: 9 WYAPADVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNT 68
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ +YA C +N A +F+ + +V+W+ +I+GY+ +G +A F + + + D
Sbjct: 69 LLKLYAHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPD 128
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
S+L+A + A + G IH V++ G V +AL+ MY+KCG + +VF+
Sbjct: 129 KFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVGNALISMYAKCGSVRDARRVFD 188
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M+ R+ +++ ++ G+ ++ + + ++++ + P T+ +L AC +
Sbjct: 189 AMASRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEK 248
Query: 426 GREIFTRMTE 435
G++I + E
Sbjct: 249 GKQIHAHIVE 258
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+ VL+ + +L KE+HA V KA LL D L+ +Y + A +F+
Sbjct: 435 YMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMS 494
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
R V WN++I R +A ++ + ++P+ T+ + AC
Sbjct: 495 MRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSAC 543
>gi|297847366|ref|XP_002891564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337406|gb|EFH67823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 596
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 271/533 (50%), Gaps = 6/533 (1%)
Query: 23 KELHALVAKASLL--RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
K++H LV + + R + ++L+R AR L + S+ LW+S++ ++
Sbjct: 19 KQIHCLVLTSPIFYTRRDLFLSRLLRRCTAATQFRYARRLLCQIQTPSIQLWDSLVGHFS 78
Query: 81 LAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
N S ++ + R + P T+ + +A + D +F H + G D
Sbjct: 79 GRVTLNRRLSFLSYRQMRRNGVVPSRHTFPPLLKAVFKLRDANPFQF-HAHILKFGFDSD 137
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L++ YS L + +VFDG D D+V +MI GF +++ F M R
Sbjct: 138 LFVRNSLISGYSNCGLFEFGSRVFDGTEDKDVVSWTAMIDGFVRNDSSLEAMTYFVEMKR 197
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCNCMN 257
G +E T+V ++ + + G+ IHGF L++ D ++ S LV MY +C C +
Sbjct: 198 SGVAANEMTVVSVLKATRKAEDVRFGRSIHGFYLEAGRVRCDVFIGSSLVDMYGKCGCYD 257
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+ + ++VTW+ALI GY Q + K ++ F ++ + ++SVL+A A
Sbjct: 258 DAQKVFDEMPSRNVVTWTALIAGYVQGRCFEKGMFVFEEMLKSDVAPNEKTLSSVLSACA 317
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G +H YVI++ E++ V + L+D Y+KCG L I VFE + E+N+ T+ +
Sbjct: 318 HVGALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTA 377
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G HG+ A + F ++ ++P+E TF +L AC HGGLV +GR +F M E +
Sbjct: 378 MINGFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACAHGGLVEEGRRLFLSMKERF 437
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
++ K +HY MV L G G LEEA + I +P AV GAL C I+ + +L +
Sbjct: 438 NLEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNAVWGALFGSCLIHKDYELGKYA 497
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A ++ + P +L+N Y+E WDDV ++R + D + K G SW+
Sbjct: 498 ASRVIKLQPSHSGRYTLLANLYSESQNWDDVARVRKQMKDQQVVKSPGCSWIE 550
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L R + +H V K S+ + T L+ YA L A ++F++ +++V+ W ++I
Sbjct: 321 ALHRGRRVHCYVIKNSIEINTTVGTTLIDFYAKCGCLEEAILVFERLREKNVYTWTAMIN 380
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+A A LF +L + + P+ T+ + AC+ HGG + G
Sbjct: 381 GFAAHGYAIGAVDLFHTMLSSHVSPNEVTFIVVLSACA-----------HGGLVEEG 426
>gi|115476154|ref|NP_001061673.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|27260973|dbj|BAC45090.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|40253357|dbj|BAD05289.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113623642|dbj|BAF23587.1| Os08g0375800 [Oryza sativa Japonica Group]
gi|215715200|dbj|BAG94951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 696
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 277/532 (52%), Gaps = 7/532 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L +L K+ L + F A+ L+ +YA + AR +FD P+R+ WN++I Y +
Sbjct: 114 QLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESG 173
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF + R L PD T+A + A E + +HG + G +
Sbjct: 174 DMASALELFLEMEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLN 232
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GK 201
A +TAYS+ + ++ ++FDG+ D DL+ N+M+ + H G D++++ F M++ G
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292
Query: 202 TPDEYTLVGLISGLWEPSLLS-VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN---CMN 257
PD Y+ +IS E G+ IHG +KS+ + V + L++MY R N M
Sbjct: 293 HPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMME 352
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY FNSL D V+W++++TGYSQ G AL +FR + + + D ++ L +++
Sbjct: 353 DAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ A + G IHG VI GF + VSS+L+ MYSK G + + FE + + + +N+
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G HG F +++++ D TF L+ +C H GLV++G EI M +Y
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G+ + EHY V L G AG L++A I S+P D V LL C I+GN +LA V
Sbjct: 533 GVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDV 592
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A LF +PR+ + V+LS+ Y+ G W D ++ + GL K G SW+
Sbjct: 593 ASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWI 644
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 213/438 (48%), Gaps = 32/438 (7%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDK 63
H L + ++SH SL + S + P +L+ Y+ ++ L +AR +FD+
Sbjct: 4 HHLAVAAARSHASLLK-----------SGVAAPTPWNQLLTAYSRSSPDGLAAARRVFDE 52
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTY------ACITRACSEN 117
P+R WN+++ A A + +A L + + L + F A + R +
Sbjct: 53 VPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIG 112
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
+ L L A+ SGL + +SAL+ Y+K + +A +VFDG+ + + V N++I
Sbjct: 113 AQLQSL------ALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALI 166
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
+G+ G +L+LF M R G PDE T L++ + PS + Q +HG +K
Sbjct: 167 AGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSA 225
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYF-R 295
V + ++ Y++C + + +F+ + DL++W+A++ Y+ G +A+ +F R
Sbjct: 226 LGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVR 285
Query: 296 KLNMQGKKADPVLIASVLAAAAKSA-NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
+ G D S++++ ++ + G VIHG VI+ E V +AL+ MY++
Sbjct: 286 MMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRY 345
Query: 355 G---YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+ + F ++ ++ +++NS++ G HG + A +FFR + + + DE FS
Sbjct: 346 NENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFS 405
Query: 412 ALLCACCHGGLVNDGREI 429
A L + ++ G++I
Sbjct: 406 AALRSSSELAVLQLGKQI 423
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H LV + + F ++ L+ +Y+ + ++ AR F++ + S WN++I YA
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQH 480
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ + LF +L+ + D+ T+ + +CS
Sbjct: 481 GQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
>gi|125559296|gb|EAZ04832.1| hypothetical protein OsI_27010 [Oryza sativa Indica Group]
Length = 700
Score = 284 bits (727), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 163/523 (31%), Positives = 266/523 (50%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+ A +A + + F LV ++A L AR +F+ R + W ++I +
Sbjct: 176 VEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGN 235
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ + LF ++ D+ A + AC +L +HG A+ SG D S+A
Sbjct: 236 WLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNA 295
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y K ++ A +F + D+V +S+I G++ G + S+ LF M+ LG P+
Sbjct: 296 LVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPN 355
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TL ++ L L+ G+ IH F ++ + ++V S L+ +Y++ + A +F
Sbjct: 356 SSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFW 415
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
DL W++++ GY+ G A R L G K D V + SVL + +
Sbjct: 416 LTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQ 475
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H YVI++ V++AL+DMY KCG+L + +VF+ M+ERN +TYN +I G
Sbjct: 476 GKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGK 535
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
H QA FF + G+ PD+ TF ALL C H GL++ G ++ M +Y I + E
Sbjct: 536 HNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKE 595
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY +V L G L+EA+ F+ ++ + + V G LL+ C ++ D+AE+V ++FE
Sbjct: 596 HYSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQ 655
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+P Y ++LSN YA+ G W DV ++R I + L+KE G S
Sbjct: 656 NPNDPGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 698
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 255/567 (44%), Gaps = 55/567 (9%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQ 66
L+L L +S + LHA V +LVR YA L +V + R+ FD P+
Sbjct: 54 LLLRL-QSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRV-FDGMPR 111
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRF 125
R+ F WN++I+ A RF++A +F ++ + D FTY + +AC+ + R
Sbjct: 112 RNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRK 171
Query: 126 VH---GGAIVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
V I SG R ++ ALV ++K +DEA VF+ + DL +MI G
Sbjct: 172 VWEMVEADIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTV 231
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
H G W + + LF+ M G D +IS L VG +HG +KS Y
Sbjct: 232 HSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIY 291
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
VS+ LV MY +C C+ A +F S D+V+WS+LI GYSQ G + ++ F ++ G
Sbjct: 292 VSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLG 351
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ +AS+L + + G IH + I+HG E S V SAL+D+YSK G + +
Sbjct: 352 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 411
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC---- 417
+F ++++ +NS++ G ++G++ AF R + + GL PD T ++L C
Sbjct: 412 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 471
Query: 418 -------------------------------CHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
C G + +E+F MTE T Y
Sbjct: 472 MLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTER-----NTVTY 526
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPK---PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
++ G + ++A SF + + D ALLSCC G D + H +
Sbjct: 527 NILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLH 586
Query: 504 N---DPRKGAYKVMLSNTYAEDGRWDD 527
+ P K Y ++ + Y+ G+ D+
Sbjct: 587 DYNISPEKEHYSCIV-DLYSRCGKLDE 612
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H + L R F + L+ LY+ ++ A +F T + + +WNS++ YA+
Sbjct: 376 KEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVN 435
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A + L + LKPD+ T + C+++ L + +H I + +
Sbjct: 436 GYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVN 495
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y K ++ A +VF +++ + V N +IS F D++L FD M R G
Sbjct: 496 NALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIA 555
Query: 203 PDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD+ T V L+S GL + L +H + + + Y S +V +Y+RC ++
Sbjct: 556 PDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY----SCIVDLYSRCGKLD 611
Query: 258 SAY 260
A+
Sbjct: 612 EAW 614
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L H L + KELHA V K + L+ +Y L A+ +F +R+
Sbjct: 463 VLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERN 522
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
+N +I ++ + + A S F + R + PD T+ + CS + GL H
Sbjct: 523 TVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYH 582
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+ + S +V YS+ +DEA
Sbjct: 583 SMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 613
>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
Length = 713
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 155/525 (29%), Positives = 266/525 (50%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K L+ F + L+ +Y N + R +F + P R+V W +II A
Sbjct: 138 LHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVSWTAIITGLVRAGY 197
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A F + R++++ D++T+A +AC+++ L R +H A+ G S ++
Sbjct: 198 NKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANT 257
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L T Y+K ++ + +F+ +S D+V ++I+ G + ++Q F M +P+
Sbjct: 258 LATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPN 317
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
EYT +ISG + + G+ +H L + V + +++MYA+C + S+ +F+
Sbjct: 318 EYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFH 377
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+V+WS +I GY Q G +A + M+G K +ASVL+A A +
Sbjct: 378 EMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEH 437
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H YV+ G E + MV SAL++MY KCG + ++F+ +I+++ ++I G
Sbjct: 438 GKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAE 497
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG++ + + F I GL PD TF +L AC H GLV+ G F M+++Y I E
Sbjct: 498 HGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKE 557
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY M+ LL AG L +A I ++P D V LL C ++G+ + A ++ +
Sbjct: 558 HYGCMIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQL 617
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P + L+N YA G+W + +R + G+ KE G SW+
Sbjct: 618 EPNCAGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWI 662
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 222/457 (48%), Gaps = 7/457 (1%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITR 112
L +AR +FDK Q+ W ++I Y A+ ++A LFKN+ + + L+ D F + +
Sbjct: 65 LGNARRMFDKMSQKDEISWTTLISGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHK 124
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
AC NSD+ +HG A+ +GL SAL+ Y+K I E +VF + ++V
Sbjct: 125 ACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKNGKIFEGRRVFHEMPMRNVVS 184
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
++I+G G+ ++L F M R D YT + + L+ G+ IH +
Sbjct: 185 WTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAM 244
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
K FD +V++ L +MY +C + +F + D+V+W+ +IT Q G A+
Sbjct: 245 KKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIITTLVQMGQEECAVQ 304
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ + A+V++ A A + G +H ++ G S+ V ++++ MY+
Sbjct: 305 AFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYA 364
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG L +F M+ R+I++++++I G G +AFE + +G P E ++
Sbjct: 365 KCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALAS 424
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+L AC + ++ G+++ + G++ ++ + G++EEA S I+ +
Sbjct: 425 VLSACGNMAILEHGKQLHAYVL-SIGLEHTAMVLSALINMYCKCGSIEEA-SRIFDAAEN 482
Query: 473 VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
D A+++ +G S E++ LFE PR G
Sbjct: 483 DDIVSWTAMINGYAEHGYSR--EVI--DLFEKIPRVG 515
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 182/414 (43%), Gaps = 22/414 (5%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L+ +E+HA K F A L +Y L LF+K R V W +II
Sbjct: 232 ALNYGREIHAQAMKKGFDVSSFVANTLATMYNKCGKLEYGLTLFEKMSMRDVVSWTTIIT 291
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ A F + + + P+ +T+A + C+ + + +H + GL
Sbjct: 292 TLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAA 351
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++++T Y+K + + +F ++ D+V +++I+G+ G ++ +L WM
Sbjct: 352 SLSVENSIMTMYAKCGQLTSSSVIFHEMTRRDIVSWSTIIAGYXQGGHVSEAFELLSWMR 411
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P E+ L ++S ++L G+ +H + L + V S L++MY +C +
Sbjct: 412 MEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVLSALINMYCKCGSIE 471
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F++ + D+V+W+A+I GY++ G + + F K+ G + D V VL+A +
Sbjct: 472 EASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACS 531
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSA------LVDMYSKCGYLGLGIQVFETMS-ER 370
+ G V G+ + +S + ++D+ + G L + E M R
Sbjct: 532 HA-----GLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFHR 586
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ + +++++ +HG + I++ L P+ CA H L N
Sbjct: 587 DDVVWSTLLRACRVHGDVERGRRTAERILQ--LEPN--------CAGTHITLAN 630
>gi|115473581|ref|NP_001060389.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|22293699|dbj|BAC10044.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|113611925|dbj|BAF22303.1| Os07g0635800 [Oryza sativa Japonica Group]
gi|125601219|gb|EAZ40795.1| hypothetical protein OsJ_25273 [Oryza sativa Japonica Group]
Length = 705
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 162/519 (31%), Positives = 264/519 (50%)
Query: 29 VAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDA 88
+A + + F LV ++A L AR +F+ R + W ++I + + +
Sbjct: 185 IASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTVHSGNWLEV 244
Query: 89 KSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
LF ++ D+ A + AC +L +HG A+ SG D S+ALV
Sbjct: 245 VDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIYVSNALVDM 304
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y K ++ A +F + D+V +S+I G++ G + S+ LF M+ LG P+ TL
Sbjct: 305 YCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLGINPNSSTL 364
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
++ L L+ G+ IH F ++ + ++V S L+ +Y++ + A +F
Sbjct: 365 ASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLD 424
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
DL W++++ GY+ G A R L G K D V + SVL + + G +
Sbjct: 425 KDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKEL 484
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
H YVI++ V++AL+DMY KCG+L + +VF+ M+ERN +TYN +I G H
Sbjct: 485 HAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHE 544
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
QA FF + G+ PD+ TF ALL C H GL++ G ++ M +Y I + EHY
Sbjct: 545 DQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHYSC 604
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
+V L G L+EA+ F+ ++ + + V G LL+ C ++ D+AE+V ++FE +P
Sbjct: 605 IVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGLLAACRVHNRMDIAELVGKRIFEQNPND 664
Query: 509 GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
Y ++LSN YA+ G W DV ++R I + L+KE G S
Sbjct: 665 PGYHILLSNIYADAGMWSDVTRIRTMIQERNLKKETGNS 703
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 161/567 (28%), Positives = 255/567 (44%), Gaps = 55/567 (9%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQ 66
L+L L +S + LHA V +LVR YA L +V + R+ FD P+
Sbjct: 59 LLLRL-QSCPDFQEARRLHAAVLVGGHGHGTVLVAQLVRAYAKLGDVAHALRV-FDGMPR 116
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRF 125
R+ F WN++I+ A RF++A +F ++ + D FTY + +AC+ + R
Sbjct: 117 RNSFAWNAVIKGLVDAGRFSEALEMFWGMVNDGSVAVDGFTYPPVIKACAALGAVAQGRK 176
Query: 126 VHGGA---IVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
V I SG R ++ ALV ++K +DEA VF+ + DL +MI G
Sbjct: 177 VWEMVETDIASGNARPNVFVQCALVDMFAKCGCLDEARNVFESMQVRDLAAWTAMIGGTV 236
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
H G W + + LF+ M G D +IS L VG +HG +KS Y
Sbjct: 237 HSGNWLEVVDLFNHMRSEGFGVDSLIAATVISACGRAGELQVGTALHGCAVKSGASGDIY 296
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
VS+ LV MY +C C+ A +F S D+V+WS+LI GYSQ G + ++ F ++ G
Sbjct: 297 VSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGMHNVSVSLFCEMISLG 356
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ +AS+L + + G IH + I+HG E S V SAL+D+YSK G + +
Sbjct: 357 INPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAE 416
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC---- 417
+F ++++ +NS++ G ++G++ AF R + + GL PD T ++L C
Sbjct: 417 TIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHH 476
Query: 418 -------------------------------CHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
C G + +E+F MTE T Y
Sbjct: 477 MLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTER-----NTVTY 531
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPK---PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
++ G + ++A SF + + D ALLSCC G D + H +
Sbjct: 532 NILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYHSMLH 591
Query: 504 N---DPRKGAYKVMLSNTYAEDGRWDD 527
+ P K Y ++ + Y+ G+ D+
Sbjct: 592 DYNISPEKEHYSCIV-DLYSRCGKLDE 617
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 192/426 (45%), Gaps = 14/426 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K+ D + + LV +Y + A LF T + V W+S+I Y+
Sbjct: 282 LHGCAVKSGASGDIYVSNALVDMYCKCGCVEMADCLFWSTNSKDVVSWSSLIVGYSQNGM 341
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
N + SLF ++ + P++ T A I S + + +H +I GL R SA
Sbjct: 342 HNVSVSLFCEMISLGINPNSSTLASILPCLSVLKLIRSGKEIHCFSIRHGLERSEFVVSA 401
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ YSK LI A +F D DL + NSM++G+A G+ D + + ++G PD
Sbjct: 402 LIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVNGYSDSAFCALRLLQKVGLKPD 461
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+V ++ + +L G+ +H + +K +S V++ L+ MY +C + A VF
Sbjct: 462 HVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQ 521
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ + VT++ LI+ + + +AL +F + G D V ++L+ + + +
Sbjct: 522 LMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDK 581
Query: 325 G-----AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSV 378
G +++H Y I E S +VD+YS+CG L M+E I +
Sbjct: 582 GLHLYHSMLHDYNISPEKEH----YSCIVDLYSRCGKLDEAWCFMSNMAEEPEIDVLGGL 637
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREIFTRMTEEY 437
+ +H A + I E+ NP++ + LL G+ +D I T M +E
Sbjct: 638 LAACRVHNRMDIAELVGKRIFEQ--NPNDPGYHILLSNIYADAGMWSDVTRIRT-MIQER 694
Query: 438 GIQAKT 443
++ +T
Sbjct: 695 NLKKET 700
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 9/243 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H + L R F + L+ LY+ ++ A +F T + + +WNS++ YA+
Sbjct: 381 KEIHCFSIRHGLERSEFVVSALIDLYSKQGLIRVAETIFWLTLDKDLAIWNSMVAGYAVN 440
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A + L + LKPD+ T + C+++ L + +H I + +
Sbjct: 441 GYSDSAFCALRLLQKVGLKPDHVTVVSVLPLCNQHHMLIQGKELHAYVIKYCINSVCSVN 500
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y K ++ A +VF +++ + V N +IS F D++L FD M R G
Sbjct: 501 NALLDMYCKCGFLEVAKEVFQLMTERNTVTYNILISSFGKHNHEDQALSFFDLMKRDGIA 560
Query: 203 PDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD+ T V L+S GL + L +H + + + Y S +V +Y+RC ++
Sbjct: 561 PDKVTFVALLSCCSHAGLIDKGLHLYHSMLHDYNISPEKEHY----SCIVDLYSRCGKLD 616
Query: 258 SAY 260
A+
Sbjct: 617 EAW 619
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 63/151 (41%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L H L + KELHA V K + L+ +Y L A+ +F +R+
Sbjct: 468 VLPLCNQHHMLIQGKELHAYVIKYCINSVCSVNNALLDMYCKCGFLEVAKEVFQLMTERN 527
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
+N +I ++ + + A S F + R + PD T+ + CS + GL H
Sbjct: 528 TVTYNILISSFGKHNHEDQALSFFDLMKRDGIAPDKVTFVALLSCCSHAGLIDKGLHLYH 587
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+ + S +V YS+ +DEA
Sbjct: 588 SMLHDYNISPEKEHYSCIVDLYSRCGKLDEA 618
>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Vitis vinifera]
Length = 877
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 270/528 (51%), Gaps = 2/528 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH K D T + +Y N L A+ LF+ P ++ +N+II YA +
Sbjct: 296 QLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSD 355
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A +F+ L ++ L D + + RAC+ DL GL+ VHG ++ S + +
Sbjct: 356 KGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ-VHGLSMKSLCQSNICVA 414
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A++ Y K + EA VF+ + D V N++I+ G +K+L LF WML+ G
Sbjct: 415 NAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGME 474
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PDE+T ++ L+ G IH +KS +V L+ MY++C M A +
Sbjct: 475 PDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKL 534
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+ L +V+W+A+I+G+S Q +A F K+ G D A++L A V
Sbjct: 535 HDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTV 594
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ + +SS LVDMYSKCG + +FE R+ +T+N+++ G
Sbjct: 595 ELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGY 654
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A + F + + + P+ +TF A+L AC H GLV G F M YG+ +
Sbjct: 655 AQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQ 714
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V ++G +G + +A I +P D + LLS C I+GN ++AE A+ +
Sbjct: 715 LEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSIL 774
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ +P A V+LSN YA G W++V KLR + NGL+KE G SW+
Sbjct: 775 QLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIE 822
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 114/400 (28%), Positives = 195/400 (48%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD ++ YA + A+ LFD P+R V WNS+I Y +F +
Sbjct: 106 RDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQM 165
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R D T+A + ++CS D G +HG A+ G D +T SAL+ Y+K +
Sbjct: 166 GRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKL 225
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D +I+ F + + + V +++I+G L+LF M + G + T +
Sbjct: 226 DCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSC 285
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S L +G +HG LK+ F + + + + MY +CN ++ A +FNSL + +L +++
Sbjct: 286 AGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPNHNLQSYN 345
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A+I GY++ +AL FR L G D V ++ A A G +HG ++
Sbjct: 346 AIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKS 405
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
+ ++ V++A++DMY KCG L VFE M R+ +++N++I +G + F
Sbjct: 406 LCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLF 465
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+++ G+ PDE T+ ++L AC +N G EI R+ +
Sbjct: 466 VWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIK 505
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 115/446 (25%), Positives = 216/446 (48%), Gaps = 17/446 (3%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H L K D + L+ +YA L + F P+++ W++II
Sbjct: 195 QIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQND 254
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
LFK + + + T+A + R+C+ S L +HG A+ + G D + +
Sbjct: 255 DLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGT 314
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A + Y K + + +A K+F+ + + +L N++I G+A ++L +F + + G
Sbjct: 315 ATLDMYMKCNNLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGL 374
Query: 204 DEYTLVG------LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
DE +L G +I G E G +HG +KS S V++ ++ MY +C +
Sbjct: 375 DEVSLSGAFRACAVIKGDLE------GLQVHGLSMKSLCQSNICVANAILDMYGKCGALV 428
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF + D V+W+A+I + Q G+ K L F + G + D SVL A A
Sbjct: 429 EACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACA 488
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G IH +I+ L V AL+DMYSKCG + ++ + ++E+ ++++N+
Sbjct: 489 GWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTVVSWNA 548
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G L + +A + F ++E G++PD T++ +L C + V G++I ++ ++
Sbjct: 549 IISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKK- 607
Query: 438 GIQAKTEHYI--YMVKLLGLAGNLEE 461
+ +++ YI +V + GN+++
Sbjct: 608 --ELQSDAYISSTLVDMYSKCGNMQD 631
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 157/359 (43%), Gaps = 33/359 (9%)
Query: 90 SLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY 149
S F + T K F++ I + CS+ L + H I++ ++ L+ Y
Sbjct: 30 SPFSSYQATPTKKKTFSH--IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMY 87
Query: 150 SKLSLIDEAIKVFDG-------------------------------VSDPDLVLCNSMIS 178
K S ++ A KVFDG + + D+V NS+IS
Sbjct: 88 IKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLIS 147
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
G+ H G K + +F M R+G D T ++ G IHG +K FD
Sbjct: 148 GYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDC 207
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
S L+ MYA+C ++ + F+S+ + V+WSA+I G Q D L F+++
Sbjct: 208 DVVTGSALLDMYAKCKKLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQ 267
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
G ASV + A + + G+ +HG+ ++ F V++ +A +DMY KC L
Sbjct: 268 KAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLS 327
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++F ++ N+ +YN++I+G +A FR + + GL DE + S AC
Sbjct: 328 DAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRAC 386
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 14/318 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ Q+L+ E+H + K+ L D F L+ +Y+ ++ A L D+ +++
Sbjct: 483 VLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 542
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN+II ++L + +A+ F +L + PDNFTYA I C+ + + +H
Sbjct: 543 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 602
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I L D+ SS LV YSK + + +F+ + D V N+M+ G+A G ++
Sbjct: 603 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 662
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+L++F++M P+ T + ++ GL E L + + L + Y
Sbjct: 663 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY---- 718
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY---GKALYYFRKLNM 299
S +V + R ++ A + + F D V W L++ G+ KA Y +L
Sbjct: 719 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEP 778
Query: 300 QGKKADPVLIASVLAAAA 317
+ A VL++++ A A
Sbjct: 779 EDSAA-YVLLSNIYANAG 795
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 4/110 (3%)
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
PG H +I F+ +V V++ L+ MY KC L +VF+ M +R+ +++N+++ G
Sbjct: 60 PGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGMPQRDTVSWNAMLFGYA 119
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G A + F + E+ D ++++L+ H G ++F +M
Sbjct: 120 GRGDIGVAQKLFDAMPER----DVVSWNSLISGYLHNGDHRKVIDVFLQM 165
>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 905
Score = 284 bits (727), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 274/533 (51%), Gaps = 1/533 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +H L + L D T LV + + SA+ F R V ++N++I A
Sbjct: 245 LDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAA 304
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
A +A + + + + TY I ACS + L + +H G D
Sbjct: 305 LAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSD 364
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+AL++ Y++ + +A ++F + DL+ N++I+G+A ++++L+ M
Sbjct: 365 VQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQS 424
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G P T + L+S S + G+ IH L+S S ++++ L++MY RC +
Sbjct: 425 EGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLME 484
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +VF D+++W+++I G++Q G Y A F+++ + + D + ASVL+
Sbjct: 485 AQNVFEGTQARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKN 544
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IHG + + G +L V + +AL++MY +CG L VF ++ R+++++ ++
Sbjct: 545 PEALELGKQIHGRITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQHRDVMSWTAM 604
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLN-PDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
I G G +A E F + +G PD STF+++L AC H GLV +G +IF+ M EY
Sbjct: 605 IGGCADQGEDMKAIELFWQMQNEGFRPPDGSTFTSILSACNHAGLVLEGYQIFSSMESEY 664
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G+ EHY +V LLG A +EA + I +P P D AV LL C I+GN LAE
Sbjct: 665 GVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGACRIHGNIALAEHA 724
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A+ + + R A ++LSN YA GRWDDV K+R + G+RKE G SW+
Sbjct: 725 ANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPGRSWIE 777
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 127/461 (27%), Positives = 232/461 (50%), Gaps = 1/461 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S L K++H+ + KA RDP L+ +Y LP AR +F R
Sbjct: 134 ILTACYSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRD 193
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +N+++ YA + LF + + PD TY + A + S L + +H
Sbjct: 194 VVSYNTMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHK 253
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GL D +ALVT + +D A + F G++D D+V+ N++I+ A G +
Sbjct: 254 LTVEEGLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVE 313
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ + + M G + T + +++ L G+ IH + S + + L+S
Sbjct: 314 AFEQYYRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALIS 373
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYARC + A +F ++ DL++W+A+I GY+++ D G+A+ ++++ +G K V
Sbjct: 374 MYARCGDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVT 433
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+L+A A S+ G +IH +++ G + + +++AL++MY +CG L VFE
Sbjct: 434 FLHLLSACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ 493
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R++I++NS+I G HG A++ F+++ + L PD TF+++L C + + G++
Sbjct: 494 ARDVISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQ 553
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
I R+TE G+Q ++ + G+L++A + SL
Sbjct: 554 IHGRITES-GLQLDVNLGNALINMYIRCGSLQDARNVFHSL 593
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 124/444 (27%), Positives = 216/444 (48%), Gaps = 1/444 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +HA + +A + D F + L+ +Y + A +F + P+R V WNS+I
Sbjct: 43 LPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVFKEMPRRDVISWNSLISC 102
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
YA A LF+ + P+ TY I AC ++L + +H I +G RD
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L++ Y K + A +VF G+S D+V N+M+ +A + + L LF M
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTMLGLYAQKAYVKECLGLFGQMSS 222
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G +PD+ T + L+ PS+L G+ IH ++ +S V + LV+M RC ++S
Sbjct: 223 EGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIRVGTALVTMCVRCGDVDS 282
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A F + D+V ++ALI +Q G +A + ++ G + S+L A +
Sbjct: 283 AKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNACST 342
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S + G +IH ++ + G V + +AL+ MY++CG L ++F TM +R++I++N++
Sbjct: 343 SKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRDLISWNAI 402
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G +A ++ + +G+ P TF LL AC + DG+ I + G
Sbjct: 403 IAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHEDILRS-G 461
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEA 462
I++ ++ + G+L EA
Sbjct: 462 IKSNGHLANALMNMYRRCGSLMEA 485
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 193/376 (51%), Gaps = 4/376 (1%)
Query: 99 QLKP---DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
Q +P D TY + + C+ LP + +H + +G+G D S+ L+ Y K +
Sbjct: 19 QPRPTETDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSV 78
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A +VF + D++ NS+IS +A GF K+ QLF+ M G P++ T + +++
Sbjct: 79 LDAHQVFKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTAC 138
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ P+ L G+ IH +K+ + V + L+SMY +C + A VF + D+V+++
Sbjct: 139 YSPAELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYN 198
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
++ Y+Q+ + L F +++ +G D V ++L A + + G IH ++
Sbjct: 199 TMLGLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEE 258
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G + V +ALV M +CG + Q F+ +++R+++ YN++I L HG +AFE +
Sbjct: 259 GLNSDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQY 318
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
+ G+ + +T+ ++L AC + G+ I + ++E+ G + + ++ +
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISED-GHSSDVQIGNALISMYAR 377
Query: 456 AGNLEEAYSFIWSLPK 471
G+L +A +++PK
Sbjct: 378 CGDLPKARELFYTMPK 393
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/326 (29%), Positives = 164/326 (50%), Gaps = 6/326 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + ++L K +H+ +++ D L+ +YA LP AR LF P+R
Sbjct: 336 ILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDLPKARELFYTMPKRD 395
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+II YA +A L+K + +KP T+ + AC+ +S + +H
Sbjct: 396 LISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SG+ + ++AL+ Y + + EA VF+G D++ NSMI+G A G ++
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +LF M PD T ++SG P L +G+ IHG +S + + L++
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG-KKADPV 307
MY RC + A +VF+SL H D+++W+A+I G + QG+ KA+ F ++ +G + D
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGS 635
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVI 333
S+L+A + G V+ GY I
Sbjct: 636 TFTSILSACNHA-----GLVLEGYQI 656
>gi|125603224|gb|EAZ42549.1| hypothetical protein OsJ_27115 [Oryza sativa Japonica Group]
Length = 696
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 175/532 (32%), Positives = 277/532 (52%), Gaps = 7/532 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L +L K+ L + F A+ L+ +YA + AR +FD P+R+ WN++I Y +
Sbjct: 114 QLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESG 173
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF + R L PD T+A + A E + +HG + G +
Sbjct: 174 DMASALELFLEMEREGLAPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLN 232
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GK 201
A +TAYS+ + ++ ++FDG+ D DL+ N+M+ + H G D++++ F M++ G
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292
Query: 202 TPDEYTLVGLISGLWEPSLLS-VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN---CMN 257
PD Y+ +IS E G+ IHG +KS+ + V + L++MY R N M
Sbjct: 293 HPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMME 352
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY FNSL D V+W++++TGYSQ G AL +FR + + + D ++ L +++
Sbjct: 353 DAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ A + G IHG VI GF + VSS+L+ MYSK G + + FE + + + +N+
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G HG F +++++ D TF L+ +C H GLV++G EI M +Y
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G+ + EHY V L G AG L++A I S+P D V LL C I+GN +LA V
Sbjct: 533 GVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDV 592
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A LF +PR+ + V+LS+ Y+ G W D ++ + GL K G SW+
Sbjct: 593 ASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSWI 644
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 193/388 (49%), Gaps = 19/388 (4%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTY------ 107
L +AR +FD+ P+R WN+++ A A + +A L + + L + F
Sbjct: 43 LAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLASNTFALGSALRS 102
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
A + R + + L L A+ SGL + +SAL+ Y+K + +A +VFDG+ +
Sbjct: 103 AAVARRPAIGAQLQSL------ALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPE 156
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
+ V N++I+G+ G +L+LF M R G PDE T L++ + PS + Q +
Sbjct: 157 RNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLLTAVEGPSCFLMHQ-L 215
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGD 286
HG +K V + ++ Y++C + + +F+ + DL++W+A++ Y+ G
Sbjct: 216 HGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGM 275
Query: 287 YGKALYYF-RKLNMQGKKADPVLIASVLAAAAKSA-NVWPGAVIHGYVIQHGFELSVMVS 344
+A+ +F R + G D S++++ ++ + G VIHG VI+ E V
Sbjct: 276 DDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVC 335
Query: 345 SALVDMYSKCG---YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+AL+ MY++ + + F ++ ++ +++NS++ G HG + A +FFR + +
Sbjct: 336 NALIAMYTRYNENCMMEDAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSE 395
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREI 429
+ DE FSA L + ++ G++I
Sbjct: 396 NVRTDEYAFSAALRSSSELAVLQLGKQI 423
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 153/290 (52%), Gaps = 6/290 (2%)
Query: 145 LVTAYSKLSL--IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
L+TAYS+ S + A +VFD V D V N++++ A G ++ +L M G
Sbjct: 31 LLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAQAASGAHPEAWRLLRAMHAQGLA 90
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+ + L + ++G + LKS + + +S L+ +YA+C + A V
Sbjct: 91 SNTFALGSALRSAAVARRPAIGAQLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQV 150
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + + V+W+ALI GY++ GD AL F ++ +G D AS+L A + +
Sbjct: 151 FDGMPERNTVSWNALIAGYTESGDMASALELFLEMEREGLAPDEATFASLL-TAVEGPSC 209
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNIITYNSVILG 381
+ +HG ++++G L + V +A + YS+CG L ++F+ + + R++I++N+++
Sbjct: 210 FLMHQLHGKIVKYGSALGLTVLNAAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGA 269
Query: 382 LGLHGFTYQAFEFF-RDIIEKGLNPDESTFSALLCACC-HGGLVNDGREI 429
+G +A +FF R + E G++PD +F++++ +C HG + GR I
Sbjct: 270 YTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSIISSCSEHGHDDHQGRVI 319
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H LV + + F ++ L+ +Y+ + ++ AR F++ + S WN++I YA
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQH 480
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ + LF +L+ + D+ T+ + +CS
Sbjct: 481 GQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
>gi|293333548|ref|NP_001170485.1| uncharacterized protein LOC100384484 [Zea mays]
gi|238005588|gb|ACR33829.1| unknown [Zea mays]
gi|413920755|gb|AFW60687.1| hypothetical protein ZEAMMB73_143396 [Zea mays]
Length = 569
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 286/547 (52%), Gaps = 15/547 (2%)
Query: 13 SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS----ARILFDKTPQRS 68
+ S SL +HA + +P +AT L L V P+ AR +FD TP R
Sbjct: 28 ASSPVSLRALLPIHARAIVLGVSANPAFATSL-----LAGVAPASLAYARRVFDATPVRD 82
Query: 69 VFLWNSIIRAYA---LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
++WN+++RA++ L+H D +L+K + + PD++TY + AC+ +L R
Sbjct: 83 AYMWNTLLRAHSHSQLSHA-ADTLALYKRMRAAGVAPDHYTYPIVLPACAAARELWLGRA 141
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHC 183
VHG + L D SAL+T Y + + +A VF S +V SM++G+
Sbjct: 142 VHGDVVRFALAGDGFVHSALITMYFQEGEVADAELVFAESHGSSRTVVSWTSMVAGYVQN 201
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
++ +++ LF M+ G P+E TL+ + L L G+ +HGF ++ FD+ ++
Sbjct: 202 YYFGEAVALFGTMIAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRLGFDANIPLA 261
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L++MY +C + A +F + L +W+ ++ Y Q D +A+ +FR++ +
Sbjct: 262 NALIAMYGKCGSIPMAQTLFEGMPARSLASWNTMVAMYEQHADVVEAIKFFRRMLTEKVG 321
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D V + SVL+A A+S + G +H HG + + + LVDMY+KCG + V
Sbjct: 322 FDCVTLVSVLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNV 381
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ + R++++++++I HG + +A + F + +G+ P+ TF+A+L AC H GLV
Sbjct: 382 FDCLRMRSVVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHSGLV 441
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+G + F + +Y + EHY MV +LG AG L EAY I + D V GA L+
Sbjct: 442 EEGLKHFNSILSDYQMSPTLEHYACMVDMLGRAGRLIEAYEIIRGMSLCPDKCVWGAFLA 501
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C ++GN +LAE VA LF++ + V++SN Y E G D ++R + + L K
Sbjct: 502 GCKLHGNLELAEFVARDLFQSGSNDVTFYVLMSNMYFEAGMLKDAERMRWAMKEMELNKT 561
Query: 544 AGVSWVS 550
AG S ++
Sbjct: 562 AGRSAIN 568
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 50/109 (45%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L K +H L L D LV +YA + SAR +FD RS
Sbjct: 330 VLSACARSGALQTGKWVHELARNHGLDTDARIGNVLVDMYAKCGEIASARNVFDCLRMRS 389
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
V W+++I AYA +A LF + ++P++FT+ + AC +
Sbjct: 390 VVSWSAMISAYANHGASEEALKLFSLMKNEGVRPNSFTFTAVLVACGHS 438
>gi|357464699|ref|XP_003602631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491679|gb|AES72882.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 705
Score = 284 bits (726), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 186/615 (30%), Positives = 293/615 (47%), Gaps = 69/615 (11%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ +S+ + +HA + K + F +LV +Y L AR +FD QR+
Sbjct: 25 LLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHMQQRN 84
Query: 69 VFLWNSIIRA-------------------------------YALAHRFNDAKSLFKNLLR 97
F WN+++ A +A RF +A ++
Sbjct: 85 TFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVVDMHS 144
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
+ +++ AC+ DL +HG S D SALV YSK ++
Sbjct: 145 EDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVAS 204
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A + FD + ++V NS+I+ + G K+L++F M+ G PDE TL + S
Sbjct: 205 AQRAFDDMDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASVASACAS 264
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFN------------ 264
S + G IH +K D V + LV MYA+C +N A VF+
Sbjct: 265 LSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFDRMPLRDVVSETS 324
Query: 265 -------------------SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
++ ++V+W+ALI GY+Q G+ +A+ F L +
Sbjct: 325 MVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQNGENEEAVRLFLLLKRESIWPT 384
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGL 359
++L A A A++ G H ++++HGF + + V ++L+DMY KCG +
Sbjct: 385 HYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGEDSDIFVGNSLIDMYMKCGLVED 444
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
G VFE M ER+ +++N++I+G +G+ +A E FR+++ G PD T +L AC H
Sbjct: 445 GRLVFERMLERDNVSWNAMIVGYAQNGYGTEALEIFREMLVSGERPDHVTMIGVLSACSH 504
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV +GR F MT E+G+ +HY MV LLG AG L+EA + I ++P D V G
Sbjct: 505 AGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGRAGCLDEANNLIQTMPMEPDAVVWG 564
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
+LL+ C ++GN L + VA +L E DP V+LSN YAE GRW DV+++R + G
Sbjct: 565 SLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLLSNMYAELGRWKDVVRVRKQMRQMG 624
Query: 540 LRKEAGVSWVSGSSN 554
+ K+ G SW+S S+
Sbjct: 625 VIKQPGCSWISIQSH 639
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 60/110 (54%), Gaps = 4/110 (3%)
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D A +L KS +V+ ++H +I+ F + + + LVD+Y KCG+L +VF
Sbjct: 18 DSSPFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVF 77
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ M +RN ++N+V+ L G +A F+ + E+ D+ +++A++
Sbjct: 78 DHMQQRNTFSWNAVLGALTKFGALDEALNLFKCMPER----DQCSWNAMV 123
>gi|225423551|ref|XP_002274884.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial [Vitis vinifera]
gi|147818711|emb|CAN65040.1| hypothetical protein VITISV_009460 [Vitis vinifera]
Length = 700
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/544 (31%), Positives = 279/544 (51%), Gaps = 5/544 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL+ + ++LH + K D F T LV +YA + +R +FD+ R
Sbjct: 143 IVLKACSELRETDEGRKLHCQIVKVGS-PDSFVLTGLVDMYAKCREVEDSRRVFDEILDR 201
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W S+I Y + LF + ++ + +T + AC++ L ++VH
Sbjct: 202 NVVCWTSMIVGYVQNDCLKEGLVLFNRMREGLVEGNQYTLGSLVTACTKLGALHQGKWVH 261
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G I SG +S + L+ Y K I +A VFD +S DLV +MI G+A G+
Sbjct: 262 GYVIKSGFDLNSFLVTPLLDLYFKCGDIRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPR 321
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVL 246
++L+LF P+ T ++S + L++G+ +H CL S D + L
Sbjct: 322 EALKLFTDERWKDLLPNTVTTSSVLSACAQTGSLNMGRSVH--CLGIKLGSEDATFENAL 379
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MYA+C+ + A +VF ++F D++ W+++I+GY+Q G +AL F ++ D
Sbjct: 380 VDMYAKCHMIGDARYVFETVFDKDVIAWNSIISGYTQNGYAYEALELFDQMRSDSVYPDA 439
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ + SVL+A A G+ +HGY I+ G SV V +AL++ Y+KCG +F+
Sbjct: 440 ITLVSVLSACASVGAYRVGSSLHGYAIKAGLLSGSVYVGTALLNFYAKCGDAESARVIFD 499
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M E+N IT++++I G G+ G ++ E F D++++ L P+E F+ +L AC H G++ +
Sbjct: 500 EMGEKNTITWSAMIGGYGIQGDCSRSLELFGDMLKEKLEPNEVIFTTILSACSHSGMLGE 559
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G F M + Y +HY MV LL AG LEEA FI +P D ++ GA L C
Sbjct: 560 GWRYFNTMCQVYNFVPSMKHYACMVDLLARAGRLEEALDFIEKIPIQPDVSLLGAFLHGC 619
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++ DL E+ ++ E P K Y V++SN YA +GRW ++ + + GL K G
Sbjct: 620 RLHSRFDLGEVAVRRMLELHPDKACYYVLMSNLYASEGRWSQANQVMELMKQRGLAKLPG 679
Query: 546 VSWV 549
S V
Sbjct: 680 WSLV 683
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 125/406 (30%), Positives = 214/406 (52%), Gaps = 3/406 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++S +++HAL+ L D TKLV LY + AR++FD+ ++ W +I
Sbjct: 50 KTVSSLRKIHALLVVHGLSEDLLCETKLVSLYGSFGHVECARLMFDRIRNPDLYSWKVMI 109
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
R Y L +++ + LR L DN ++ + +ACSE + R +H + G
Sbjct: 110 RWYFLNDSYSEIVQFYNTRLRKCLNEYDNVVFSIVLKACSELRETDEGRKLHCQIVKVG- 168
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
DS + LV Y+K ++++ +VFD + D ++V SMI G+ + L LF+
Sbjct: 169 SPDSFVLTGLVDMYAKCREVEDSRRVFDEILDRNVVCWTSMIVGYVQNDCLKEGLVLFNR 228
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M ++YTL L++ + L G+ +HG+ +KS FD ++ + L+ +Y +C
Sbjct: 229 MREGLVEGNQYTLGSLVTACTKLGALHQGKWVHGYVIKSGFDLNSFLVTPLLDLYFKCGD 288
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A+ VF+ L DLV+W+A+I GY+Q+G +AL F + + V +SVL+A
Sbjct: 289 IRDAFSVFDELSTIDLVSWTAMIVGYAQRGYPREALKLFTDERWKDLLPNTVTTSSVLSA 348
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A++ ++ G +H I+ G E +ALVDMY+KC +G VFET+ ++++I +
Sbjct: 349 CAQTGSLNMGRSVHCLGIKLGSE-DATFENALVDMYAKCHMIGDARYVFETVFDKDVIAW 407
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
NS+I G +G+ Y+A E F + + PD T ++L AC G
Sbjct: 408 NSIISGYTQNGYAYEALELFDQMRSDSVYPDAITLVSVLSACASVG 453
>gi|242051555|ref|XP_002454923.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
gi|241926898|gb|EES00043.1| hypothetical protein SORBIDRAFT_03g001460 [Sorghum bicolor]
Length = 741
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 169/513 (32%), Positives = 270/513 (52%), Gaps = 2/513 (0%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
F +T L+ +Y + AR +FD+ P R+ W +++ YA +A LF+ +L+
Sbjct: 159 FVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQE 218
Query: 99 -QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
L+ + F + A S L +HG + GL ++LVT Y+K +D
Sbjct: 219 CPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDA 278
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A+ VF + + + ++MI+G+A G D + +F M G +P E+T VG+++ +
Sbjct: 279 AMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGILNASSD 338
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH-PDLVTWSA 276
L VG+ HG +K F+ YV S LV MYA+C C A F+ L+ D+V W+A
Sbjct: 339 MGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTA 398
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+ITG+ Q G++ +AL + +++ +G + + SVL A A A + PG +H +++ G
Sbjct: 399 MITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLHAQILKCG 458
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
F L V +AL MYSKCG L + VF M +R+II++NS+I G HG A + F
Sbjct: 459 FGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGRDALDLFE 518
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
++ +G+ PD TF +LCAC H GLV+ G F M+++YG+ K +HY +V +L A
Sbjct: 519 EMKLEGIAPDHITFINVLCACSHMGLVDRGWFYFRAMSKDYGLIPKLDHYACIVDILSRA 578
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G L+EA FI S+ + +L C + D+ QL E + ++LS
Sbjct: 579 GQLKEAKDFIESITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLS 638
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N YA +W+DV ++R + G+ K+ G SWV
Sbjct: 639 NIYAAQRKWNDVERVRHLMRLRGVSKDPGCSWV 671
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 1/293 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH LV K L+ LV +YA + +A +F + +R+ W+++I YA
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMAVFGSSKERNSITWSAMITGYAQNG 305
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ A ++F + P FT+ I A S+ L + HG + G R S
Sbjct: 306 EADCAATMFLQMHSAGFSPTEFTFVGILNASSDMGALVVGKQAHGLMVKLGFERQVYVKS 365
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
ALV Y+K +A F + D D+V+ +MI+G G +++L L+ M + G
Sbjct: 366 ALVDMYAKCGCTGDAKDGFHQLYDVDDVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVM 425
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P T+ ++ + L G+ +H LK F V + L +MY++C + + V
Sbjct: 426 PSYLTVTSVLRACACLAALEPGKQLHAQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVV 485
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
F + D+++W+++I+G+SQ G AL F ++ ++G D + +VL A
Sbjct: 486 FRRMPDRDIISWNSIISGFSQHGRGRDALDLFEEMKLEGIAPDHITFINVLCA 538
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 149/321 (46%), Gaps = 13/321 (4%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAY--SKLSLIDEAIKVFDGVSD--PDLVLCNSMISGFA 181
+HG A+ SG + S++L+T Y L+ A VF + D+ NS+++ +
Sbjct: 36 LHGWALKSGAASHTPVSNSLITFYCSPPRPLLGAAFAVFADIPAGLRDVASWNSLLNPLS 95
Query: 182 -HCGFWDKSLQLFDWMLRLGKT--PDEYTLVGLISGLWEPSLLSVGQGIHGFCLK---SS 235
H +L F M+ P ++ + + S G H F K SS
Sbjct: 96 RHQPL--AALSHFRSMMSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFACKLPSSS 153
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
+ +VS+ L++MY + ++ A VF+ + H + V+W+A+++GY+ +A FR
Sbjct: 154 GSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSEEAFELFR 213
Query: 296 KLNMQGK-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
+ + + + + +VL+A + + G +HG V++ G V V ++LV MY+K
Sbjct: 214 LMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSLVTMYAKA 273
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ + VF + ERN IT++++I G +G A F + G +P E TF +L
Sbjct: 274 ECMDAAMAVFGSSKERNSITWSAMITGYAQNGEADCAATMFLQMHSAGFSPTEFTFVGIL 333
Query: 415 CACCHGGLVNDGREIFTRMTE 435
A G + G++ M +
Sbjct: 334 NASSDMGALVVGKQAHGLMVK 354
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT-PQR 67
+L S +L K+ H L+ K R + + LV +YA A+ F +
Sbjct: 332 ILNASSDMGALVVGKQAHGLMVKLGFERQVYVKSALVDMYAKCGCTGDAKDGFHQLYDVD 391
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V +W ++I + +A L+ + + + P T + RAC+ + L + +H
Sbjct: 392 DVVIWTAMITGHVQNGEHEEALMLYSRMDKEGVMPSYLTVTSVLRACACLAALEPGKQLH 451
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ G G +AL T YSK +++++ VF + D D++ NS+ISGF+ G
Sbjct: 452 AQILKCGFGLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDIISWNSIISGFSQHGRGR 511
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+L LF+ M G PD T + ++ L+ G
Sbjct: 512 DALDLFEEMKLEGIAPDHITFINVLCACSHMGLVDRG 548
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 36/272 (13%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCN----CMNSAYHVFNSLFHP----DLVTWS 275
G +HG+ LKS S+ VS+ L++ Y C+ + +A+ VF + P D+ +W+
Sbjct: 33 GDALHGWALKSGAASHTPVSNSLITFY--CSPPRPLLGAAFAVFADI--PAGLRDVASWN 88
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKA---DPVLIASVLAAAAKSANVWPGAVIHGYV 332
+L+ S+ AL +FR + M A P A+V AAA+ + GAV H +
Sbjct: 89 SLLNPLSRHQPLA-ALSHFRSM-MSSTDAVLPTPHSFAAVFTAAARVPSASAGAVAHAFA 146
Query: 333 IQ---HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
+ +V VS+AL++MY K G + +VF+ M RN +++ +++ G +
Sbjct: 147 CKLPSSSGSNNVFVSTALLNMYCKLGAISDARRVFDQMPHRNAVSWAAMVSGYATGKCSE 206
Query: 390 QAFEFFRDIIEK-GLNPDESTFSALLCACC-----------HGGLVNDGREIFTRMTEE- 436
+AFE FR ++++ L +E +A+L A HG ++ DG F +
Sbjct: 207 EAFELFRLMLQECPLEKNEFVATAVLSAVSVPLGLLIGVQLHGLVLKDGLVGFVSVENSL 266
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
+ AK E M + + G+ +E S WS
Sbjct: 267 VTMYAKAE---CMDAAMAVFGSSKERNSITWS 295
>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 887
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/530 (30%), Positives = 277/530 (52%), Gaps = 4/530 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY-AL 81
++LHA V K+ L+ +Y + A +F + P + + W ++I Y L
Sbjct: 280 RQLHAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQL 339
Query: 82 AHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+R +A LF++LLR +P+ F + + ACS +L + VHG + GL R+
Sbjct: 340 GYRV-EALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVF 398
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+L Y+K + A F + +PD+V N++I+ FA G ++++ F M+ +G
Sbjct: 399 AGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIG 458
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
TPD T + L+ P L+ G+ IH + +K FD V + L++MY +C+ ++ A
Sbjct: 459 LTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDAL 518
Query: 261 HVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+VF + + +LV+W+A+++ Q+ G+ +++++ G K D + I ++L A+
Sbjct: 519 NVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAEL 578
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++ G +H Y I+ G L V V + L+DMY+KCG L VF++ +I++++S+I
Sbjct: 579 TSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLI 638
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
+G G ++A FR + G+ P+E T+ L AC H GLV +G ++ M E+GI
Sbjct: 639 VGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGI 698
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EH+ +V LL AG L EA +FI D LL+ C + N D+AE A
Sbjct: 699 PPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAG 758
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ + DP A VML N +A G W++V KLR + G++K G SW+
Sbjct: 759 NILKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWI 808
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 195/403 (48%), Gaps = 2/403 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL K++H V K++ ++ +Y + AR +FD +V W S+I
Sbjct: 173 RSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMI 232
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + NDA ++ + R+ PD T+ + +AC D+ R +H I S G
Sbjct: 233 SGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFG 292
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ +AL++ Y+ I+ A VF + DL+ +MI+G+ G+ ++L LF +
Sbjct: 293 HHLTSQNALISMYTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDL 352
Query: 197 LRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
LR G P+E+ + S L G+ +HG C+K + L MYA+
Sbjct: 353 LRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGF 412
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ SA F + +PD+V+W+A+I ++ GD +A+ +FR++ G D + S+L
Sbjct: 413 LPSAKMAFCQIKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCT 472
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIIT 374
+ G IH Y+++ GF+ + V ++L+ MY+KC +L + VF +S N+++
Sbjct: 473 CGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVS 532
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+N+++ + F ++++ G PD T + LL C
Sbjct: 533 WNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTC 575
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 198/417 (47%), Gaps = 7/417 (1%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
NS I H + +A F L+ + +P TY + AC+ L + +H
Sbjct: 127 NSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPS--TYTSLVLACANFRSLDYAKKIHDH 184
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ S I + ++ Y K + +A KVFD + P++V SMISG++ G + +
Sbjct: 185 VLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQLPNVVSWTSMISGYSQNGQANDA 244
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+ ++ M R G+ PD+ T +I + + +G+ +H +KS F + + L+SM
Sbjct: 245 IIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISM 304
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVL 308
Y + A +VF + DL++W +ITGY Q G +ALY FR L QG + + +
Sbjct: 305 YTNFGQIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVEALYLFRDLLRQGTYQPNEFI 364
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
SV +A + + G +HG ++ G +V +L DMY+K G+L F +
Sbjct: 365 FGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIK 424
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+I+++N++I +G +A +FFR +I GL PD T+ +LLC C +N GR+
Sbjct: 425 NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQ 484
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
I + + + G + ++ + +L +A + + + + A+LS C
Sbjct: 485 IHSYIV-KIGFDKEITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSAC 540
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 188/406 (46%), Gaps = 17/406 (4%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K++H + K L R+ F L +YA LPSA++ F + + WN+II A
Sbjct: 378 LEYGKQVHGMCVKFGLRRNVFAGCSLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAA 437
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+A N+A F+ ++ L PD+ TY + C L R +H + G ++
Sbjct: 438 FADNGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKE 497
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++L+T Y+K S + +A+ VF +S + +LV N+++S ++ +L+ M
Sbjct: 498 ITVCNSLLTMYTKCSHLHDALNVFRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMH 557
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G PD T+ L+ E + L VG +H + +KS V + L+ MYA+C +
Sbjct: 558 FSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLK 617
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+S + D+V+WS+LI GY+Q G +AL FR + G + + V L+A +
Sbjct: 618 HARDVFDSTQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACS 677
Query: 318 KSANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITY 375
V G ++ + +HG + S +VD+ ++ G L + + +I +
Sbjct: 678 HIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAW 737
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKG------LNPDESTFSALLC 415
+++ H DI E+G L+P S +LC
Sbjct: 738 KTLLAACKTHNNV--------DIAERGAGNILKLDPSNSAAMVMLC 775
>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 975
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/528 (32%), Positives = 273/528 (51%), Gaps = 3/528 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
H L K L + + L+ +Y+ L AR+LFD T +++V WNS+I Y+
Sbjct: 321 FHGLALKLGLCGELKVNSSLLDMYSKCGYLCEARVLFD-TNEKNVISWNSMIGGYSKDRD 379
Query: 85 FNDAKSLFKNL-LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSITS 142
F A L + + + ++K + T + C E L+ +HG A+ G + D + +
Sbjct: 380 FRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVA 439
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A V Y+K + A VF G+ + N++I G GF K+L L+ M G
Sbjct: 440 NAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLE 499
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +T+ L+S LS G+ IHG L++ F+ +++ LVS+Y +C + A
Sbjct: 500 PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLF 559
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+++ +LV W+ +I G+SQ AL F ++ D + I L A ++ + +
Sbjct: 560 FDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSAL 619
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + ++ V+ +L+DMY+KCG + +F+ + + +T+N +I G
Sbjct: 620 RLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGY 679
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG +A E F+ + G PD TF ALL AC H GLV +G E +M +GI+ K
Sbjct: 680 GIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPK 739
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V +LG AG L EA + LP D + +LLS C Y + D+ E VA++L
Sbjct: 740 LEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLL 799
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E P K V++SN YA G+WD+V K+R + + GL+K+AG SW+
Sbjct: 800 ELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIE 847
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 123/432 (28%), Positives = 226/432 (52%), Gaps = 7/432 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L+L ++++ +++H ++ + + D T+LV +Y++ + + ++F+ + +
Sbjct: 98 LLLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRR 157
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRF 125
+++FLWN+++ Y F DA +F ++ T+ PDNFT C+ +AC D+
Sbjct: 158 KNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEA 217
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG A+ + + D +AL+ Y K ++ A+KVFD + +LV NS++ G
Sbjct: 218 VHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMPQRNLVSWNSVMYACLENGV 277
Query: 186 WDKSLQLFDWMLR--LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+++S LF +L G PD T+V +I + +G HG LK V+
Sbjct: 278 FEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVN 337
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK- 302
S L+ MY++C + A +F++ ++++W+++I GYS+ D+ A RK+ M+ K
Sbjct: 338 SSLLDMYSKCGYLCEARVLFDT-NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKV 396
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGI 361
K + V + +VL + IHGY ++HGF + +V++A V Y+KCG L
Sbjct: 397 KVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAE 456
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
VF M + + ++N++I G +GF +A + + + GL PD T ++LL AC
Sbjct: 457 GVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLK 516
Query: 422 LVNDGREIFTRM 433
++ G+EI M
Sbjct: 517 SLSCGKEIHGSM 528
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 12/310 (3%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SLS KE+H + + D F LV LY + A++ FD ++++ WN++I
Sbjct: 516 KSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMI 575
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
++ DA +F +L +++ PD + ACS+ S L + +H A+ S L
Sbjct: 576 NGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLT 635
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S + +L+ Y+K ++++ +FD V V N +I+G+ G K+++LF M
Sbjct: 636 EHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLITGYGIHGHGRKAIELFKSM 695
Query: 197 LRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
G PD T + L++ GL L +GQ F +K + Y + +V M
Sbjct: 696 QNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHY----ACVVDMLG 751
Query: 252 RCNCMNSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG--KKADPVL 308
R +N A + N L PD WS+L++ D KL G K + VL
Sbjct: 752 RAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVL 811
Query: 309 IASVLAAAAK 318
I++ A K
Sbjct: 812 ISNFYARLGK 821
>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
cordifolium]
Length = 679
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 283/530 (53%), Gaps = 33/530 (6%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
LP A +F + + WN++IR +AL+ A +L+ ++ L P+++T+ + ++
Sbjct: 28 LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87
Query: 114 CSENSDLPGLRFVHGGAIVSGLG-------------------------------RDSITS 142
C+++ + +H + GL RD ++
Sbjct: 88 CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSY 147
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A++T Y+ +D+A K+FD + D+V N+MISG+A G + ++L+LF+ M+++
Sbjct: 148 TAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVK 207
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PDE T+ ++S + +G+ IH + F S + + L+ +Y++C M A+ +
Sbjct: 208 PDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERAHGL 267
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F L + D+++W+ LI GY+ + +AL F+++ G+ + V + S+L A A +
Sbjct: 268 FEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHLGAI 327
Query: 323 WPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G IH Y+ + G + + ++L+DMY+KCG + QVF+T+ +++ + N++I
Sbjct: 328 DIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNAMIF 387
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +HG AF+ + + G+ PD+ TF LL AC H GL + GR+IF MT +Y I+
Sbjct: 388 GFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDYRIE 447
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
K EHY M+ LLG +G +EA I S+ D + G+LL C I+ N +L E++A +
Sbjct: 448 PKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELIAQK 507
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L + +P+ V+LSN YA RWDDV ++R + D GL+K G S +
Sbjct: 508 LMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIE 557
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 177/389 (45%), Gaps = 45/389 (11%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD T ++ YA + A+ +FD+ P + V WN++I YA R+ +A LF +
Sbjct: 142 RDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEM 201
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
++ +KPD T A + C+ + ++ R +H G G + +AL+ YSK +
Sbjct: 202 MKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEM 261
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+ A +F+G+ D++ N++I G+A+ ++L +F ML+LG+TP++ T++ ++
Sbjct: 262 ERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPAC 321
Query: 216 WEPSLLSVGQGIHGFCLK--SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
+ +G+ IH + K + + + L+ MYA+C + +A VF+++ + L +
Sbjct: 322 AHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSS 381
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
+A+I G++ G A ++ G + D + +L+A
Sbjct: 382 CNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSAC----------------- 424
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-----ERNIITYNSVILGLGLHGFT 388
S G LG ++F++M+ E + Y +I LG G
Sbjct: 425 ------------------SHAGLSDLGRKIFKSMTLDYRIEPKLEHYGCMIDLLGRSGLF 466
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+A E + + PD + +LL AC
Sbjct: 467 KEAEELINSMT---MEPDGVIWGSLLKAC 492
>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
Length = 805
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/593 (29%), Positives = 293/593 (49%), Gaps = 72/593 (12%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L +S + K++H+++ S+ D KLV YA L R +FD +++
Sbjct: 105 VLQLCAGLKSFTDGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL---KPDN----FTYACITRACSENSDLP 121
V+LWN ++ YA F ++ LFK ++ + +P++ F C S NS +
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMIS 224
Query: 122 GL--------------------------------------------RFVHGGAIVSGLGR 137
G + VH AI S R
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S+ L+ YSK +D A++VF+ + + ++V SMI+G+ G D +++L M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G D + ++ L G+ +H + ++ +S +V + L+ MYA+C M
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMDMYAKCGSME 404
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A VF+++ D+++W+ +I G+ K D +A VL A A
Sbjct: 405 AANSVFSTMVVKDIISWNTMI------GEL---------------KPDSRTMACVLPACA 443
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G IHGY++++G+ V++ALVD+Y KCG LGL +F+ + ++++++
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G G+HG+ +A F ++ + G+ PDE +F ++L AC H GL+ G F M ++
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDF 563
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I+ K EHY MV LL GNL +AY F+ +LP D + GALL C Y + +LAE V
Sbjct: 564 NIEPKLEHYACMVDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYHDIELAEKV 623
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A ++FE +P Y V+L+N YAE +W++V +LR+ I GLRK G SW+
Sbjct: 624 AERVFELEPENTGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSWIE 676
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
+ ++A I + Q GD A+ Q + + SVL A + G +H
Sbjct: 66 VTDYNAKILHFCQLGDLENAMELI--CMCQKSELETKTYGSVLQLCAGLKSFTDGKKVHS 123
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
+ + + + LV Y+ CG L G +VF+TM ++N+ +N ++ G +
Sbjct: 124 IIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKE 183
Query: 391 AFEFFRDIIEKGL 403
+ F+ ++EKG+
Sbjct: 184 SICLFKIMVEKGI 196
>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g14850-like [Vitis vinifera]
Length = 684
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 284/551 (51%), Gaps = 9/551 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDP---FYATKLVRLYALNNVLPSARILFDKTP 65
++E + S Q + HA + K L +P F LV +Y+ + SA++L TP
Sbjct: 12 LVESAVSTQCSRLGRAAHAQIIKT--LDNPLPSFIYNHLVNMYSKLDRPNSAQLLLSLTP 69
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC-SENSDLPGLR 124
RSV W ++I RF A F N+ R ++P++FT+ C +A S S L G +
Sbjct: 70 NRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVG-K 128
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH A+ +G D + YSK L +EA K+FD + + ++ N+ +S G
Sbjct: 129 QVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVLEG 188
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+D +L F G P+ T ++ S L +G+ +HGF L+S F++ V++
Sbjct: 189 RYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSGFEADVSVAN 248
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+ Y +C+ + + +F+ + P+ V+W ++I Y Q + KA F + +G +
Sbjct: 249 GLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEP 308
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+++SVL+A A + + G +H ++ ++ V SALVDMY KCG + + F
Sbjct: 309 TDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAF 368
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII--EKGLNPDESTFSALLCACCHGGL 422
+ M ERN++T+N++I G G A F ++ + P+ TF +L AC G
Sbjct: 369 DEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGS 428
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
VN G EIF M YGI+ EHY +V LLG AG +E+AY FI +P +V GALL
Sbjct: 429 VNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWGALL 488
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
++G S+L ++ A LFE DP V+LSN +A GRW++ +R ++ D G++K
Sbjct: 489 GASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFAAAGRWEEATLVRKEMKDVGIKK 548
Query: 543 EAGVSWVSGSS 553
AG SW++ +
Sbjct: 549 GAGCSWITAGN 559
>gi|147801011|emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
Length = 711
Score = 283 bits (725), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 269/518 (51%), Gaps = 13/518 (2%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
TKL+ Y + +AR +FD P+RSV W +++ Y+ RF A LF ++ +K
Sbjct: 190 TKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVK 249
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGL---GR---DSITSSALVTAYSKLSLI 155
+ FTY RAC+ LR + G V G GR + SALV +SK +
Sbjct: 250 ANQFTYGSALRACTS------LRCLDMGIQVQGCIQKGRFVENLFVKSALVDFHSKCGKM 303
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
++A +F + + D+V N+MI G+A GF D S +F MLR G PD YTL ++
Sbjct: 304 EDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRAS 363
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
E L + IHG + + SYD V+ +L++ YA+ + SA + + DL + +
Sbjct: 364 AEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKDLRKGMLKKDLFSST 423
Query: 276 ALITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
ALITGY+ +G Y AL F+++N D V++ S+L A A+ G IH + ++
Sbjct: 424 ALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAFALK 483
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ V + +AL+DMY+K G + + F+ M E+N+I++ S+I G HG+ + A
Sbjct: 484 YQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAVSL 543
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
++ + KG P++ TF +LL AC H GL +G E F M +Y I+ + EHY MV L
Sbjct: 544 YKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFA 603
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
G LEEAY+ + + + ++ GA+L IYG L + A LF P V+
Sbjct: 604 RQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLFNMQPENSVNYVV 663
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
L++ Y+ G WDD K+R + + +K AG S+ +
Sbjct: 664 LASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQAT 701
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/337 (25%), Positives = 164/337 (48%), Gaps = 4/337 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++ + K + + F + LV ++ + A LF +R V WN++I YA+
Sbjct: 273 QVQGCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQG 332
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+D+ +F+++LR L PD +T + RA +E L +HG G G I +
Sbjct: 333 FADDSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTG 392
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD-KSLQLFDWMLRLGKT 202
L+ AY+K + A + G+ DL ++I+G+AH G + +L LF M ++
Sbjct: 393 LLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIG 452
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNCMNSAYH 261
D+ L +++ + ++G IH F LK SYD + + L+ MYA+ + A
Sbjct: 453 MDDVILCSMLNICANLASFALGTQIHAFALKYQ-PSYDVAMGNALIDMYAKSGEIEDAKR 511
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F+ + ++++W++LI+GY++ G A+ ++K+ +G K + V S+L A + +
Sbjct: 512 AFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTGL 571
Query: 322 VWPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + V ++ + S +VD++++ G L
Sbjct: 572 TAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLL 608
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 150/312 (48%), Gaps = 6/312 (1%)
Query: 109 CITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP 168
CI + + L +H I +G G D ++ L+ Y K+ + A VFDG+ +
Sbjct: 161 CIDKKAKKQGHL-----IHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPER 215
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
+V +M+SG++ G ++K+ LF M G +++T + L +G +
Sbjct: 216 SVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQ 275
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
G K F +V S LV +++C M A ++F ++ D+V+W+A+I GY+ QG
Sbjct: 276 GCIQKGRFVENLFVKSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFAD 335
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+ FR + G D + SVL A+A+ + IHG + Q G+ +V+ L+
Sbjct: 336 DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLI 395
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG-FTYQAFEFFRDIIEKGLNPDE 407
+ Y+K G L + + M ++++ + ++I G G ++ A + F+++ + + D+
Sbjct: 396 NAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDD 455
Query: 408 STFSALLCACCH 419
++L C +
Sbjct: 456 VILCSMLNICAN 467
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 106/198 (53%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G IH + + F S ++++ L+ Y + + +A +VF+ + +V+W+A+++GYSQ
Sbjct: 170 GHLIHTHLITNGFGSDLHLNTKLIIFYVKVGDVIAARNVFDGMPERSVVSWTAMVSGYSQ 229
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G + KA F + G KA+ S L A + G + G + + F ++ V
Sbjct: 230 NGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQVQGCIQKGRFVENLFV 289
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
SALVD +SKCG + +F TM ER+++++N++I G + GF +F FR ++ GL
Sbjct: 290 KSALVDFHSKCGKMEDASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 349
Query: 404 NPDESTFSALLCACCHGG 421
PD T ++L A GG
Sbjct: 350 VPDCYTLGSVLRASAEGG 367
>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
Length = 571
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 156/445 (35%), Positives = 251/445 (56%), Gaps = 1/445 (0%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
I +AC+ D+ R VHG + + + + + L+ Y+K ++D AI VFD +S
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+V S+I+ +A G D++++LF M R G +PD +T+ ++ L G+ +H
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+ ++ S +V + L+ MYA+C M A VF + D+++W+ +I GYS+ +
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL F + ++ K D +A +L A A A++ G +HG+++++GF V++ALVD
Sbjct: 184 ALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MY KCG L +F+ + +++IT+ +I G G+HGF A F ++ + G+ PDE +
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
F ++L AC H GL+++G F M +E ++ K EHY +V LL +G L AY FI S+
Sbjct: 303 FISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYKFIKSM 362
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P D + GALLS C I+ + LAE VA +FE +P Y V+L+NTYAE +W++V
Sbjct: 363 PIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAEKWEEVK 422
Query: 530 KLRDDIVDNGLRKEAGVSWVSGSSN 554
KLR I GL+K G SW+ S
Sbjct: 423 KLRQKIGRRGLKKNPGCSWIEVKSK 447
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 193/413 (46%), Gaps = 15/413 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + +S + +H KA + + L+ +YA VL A ++FD R+
Sbjct: 4 ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMSVRT 63
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W S+I AYA ++A LF + R + PD FT + AC+ N L + VH
Sbjct: 64 VVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHN 123
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + + +AL+ Y+K +++A VF + D++ N+MI G++ ++
Sbjct: 124 YIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNSLPNE 183
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF M+ L PD TL ++ + L G+ +HG L++ F S V++ LV
Sbjct: 184 ALSLFGDMV-LEMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANALVD 242
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C A +F+ + DL+TW+ +I GY G A+ F ++ G + D V
Sbjct: 243 MYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVS 302
Query: 309 IASVLAAAAKSANVWPGAVIHGY----VIQHGFELSVMVS--SALVDMYSKCGYLGLGIQ 362
S+L A + S G + G+ V+Q + + + +VD+ ++ G L + +
Sbjct: 303 FISILYACSHS-----GLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAYK 357
Query: 363 VFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
++M E + + +++ G +H A + + E L P+ + + LL
Sbjct: 358 FIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFE--LEPENTGYYVLL 408
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 1/162 (0%)
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ S+L A A +V G +HG ++ + L+DMY+KCG L I VF+ MS
Sbjct: 1 MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R ++T+ S+I G + +A F ++ +G++PD T + +L AC G + +G++
Sbjct: 61 VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKD 120
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+ + E +Q+ ++ + G++E+A S +P
Sbjct: 121 VHNYIREN-DMQSNIFVCNALMDMYAKCGSMEDANSVFLEMP 161
>gi|359492597|ref|XP_002282781.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g04860-like [Vitis vinifera]
Length = 724
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 285/531 (53%), Gaps = 6/531 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H K+ L D L +YA L +A +LF++ +++ WN++I AY
Sbjct: 174 KAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQN 233
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F++A +FK + + +++ + Y I S N+ L H I +G D+
Sbjct: 234 GLFDEAMLVFKQMQKERVEVN---YVTIISLLSANAHLDS---THCYVIKTGFATDASVI 287
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LV +Y+ I+ A +++ + +LV +MISG+A G ++ F ML+L
Sbjct: 288 TSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMK 347
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +V ++ G +P+ + G GIH + LK+ + V + L+SMY++ + + + +
Sbjct: 348 PDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSL 407
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + L++W+++I+ Q G A+ F ++ M G D + IAS+LA ++ +
Sbjct: 408 FSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFL 467
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H YV+++ ++ + +ALVDMY KCG L +VF+++ E + T+N++I G
Sbjct: 468 QFGERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGY 527
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
GL G ++A + ++ E+GL PD TF +L AC HGGLV +G+ F M E++G+
Sbjct: 528 GLSGHEHRALSCYSEMQEQGLKPDRITFLGVLSACTHGGLVWEGKRYFRSMREDFGMIPG 587
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+H MV LL AG LEEA F+ ++ D A+ GALL+ C I+ L E +A +L
Sbjct: 588 LQHNACMVDLLSRAGFLEEAVIFVKNMEVEPDSAIWGALLTSCCIHQELKLGECLAKRLL 647
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
D G V++SN YA GRWDDV ++R + D G +G+S + SS
Sbjct: 648 LLDYYSGGLYVLMSNLYASKGRWDDVARVRKMMKDTGGDGSSGISLIEVSS 698
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 201/440 (45%), Gaps = 19/440 (4%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ T + Y + A+ LF++ P+R V WN++I Y+ DA +F +LR
Sbjct: 89 YLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLRE 148
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
P T + +C + + +HG I SGL D +AL + Y+K + + A
Sbjct: 149 GFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKCADLQAA 208
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F+ + + V N+MI + G +D+++ +F M + + T++ L+S
Sbjct: 209 EVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIISLLSA--NA 266
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
L S H + +K+ F + V + LV YA C + SA ++N + +LV+ +A+I
Sbjct: 267 HLDST----HCYVIKTGFATDASVITSLVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMI 322
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+GY+++G+ G + F ++ K D V + S+L + G IH Y ++ G
Sbjct: 323 SGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLC 382
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V + L+ MYSK G + +F M E+ +I++NSVI G T A E F +
Sbjct: 383 ADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQM 442
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM------TEEYGIQAKTEHYIYMVKL 452
G +PD T ++LL C G + G + + E++ A + YI
Sbjct: 443 RMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIK---- 498
Query: 453 LGLAGNLEEAYSFIWSLPKP 472
G LE A S+ +P
Sbjct: 499 ---CGRLESAERVFKSIKEP 515
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 155/308 (50%), Gaps = 7/308 (2%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
+A TRA N+ + + + SG + ++A + Y KL I A +F+ +
Sbjct: 57 FAVGTRALDANTKIEANQ-IQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMP 115
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
D+V N++I G++ G+ +L++F MLR G P + TLVGL+ P ++ G+
Sbjct: 116 RRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKA 175
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IHGF +KS D V + L SMYA+C + +A +F +F V+W+ +I Y Q G
Sbjct: 176 IHGFGIKSGLDLDCRVKNALTSMYAKCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGL 235
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ +A+ F+++ + + + V I S+L+A A + H YVI+ GF V ++
Sbjct: 236 FDEAMLVFKQMQKERVEVNYVTIISLLSANAHLDST------HCYVIKTGFATDASVITS 289
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
LV Y+ CG + ++ M +RN+++ ++I G G E F +++ + PD
Sbjct: 290 LVCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAEKGNMGLVVECFTQMLQLKMKPD 349
Query: 407 ESTFSALL 414
++L
Sbjct: 350 AVAMVSIL 357
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 98/187 (52%)
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
KS F+ Y Y+++ + Y + C+ A H+F + D+V+W+ALI GYS+ G AL
Sbjct: 81 KSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALE 140
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ +G + ++ + + ++ G IHG+ I+ G +L V +AL MY+
Sbjct: 141 VFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYA 200
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KC L +FE + E+ +++N++I G +G +A F+ + ++ + + T +
Sbjct: 201 KCADLQAAEVLFEEIFEKTEVSWNTMIGAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIS 260
Query: 413 LLCACCH 419
LL A H
Sbjct: 261 LLSANAH 267
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
I ++ + GF V +++A +D Y K G + +FE M R+++++N++I G +G+
Sbjct: 75 IQTHLRKSGFNQYVYLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGY 134
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
Y A E F ++ +G P + T L+ +C ++ G+ I
Sbjct: 135 DYDALEVFVQMLREGFPPCQRTLVGLVPSCGRPDIIFQGKAI 176
>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
lyrata]
Length = 684
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/546 (30%), Positives = 279/546 (51%), Gaps = 3/546 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L+ + S S+ + +HA + K PF A L+ +Y+ + SAR++ TP
Sbjct: 11 LLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R+V W S++ A F+ A F + R + P++FT+ C+ +A + + +
Sbjct: 71 RNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H A+ G D + Y K L D+A K+FD + + +L N+ IS G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAYISNSVTDGRP 190
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++++ F R+G P+ T G ++ + LL +G +HG +S FD+ V + L
Sbjct: 191 KEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSVYNGL 250
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ Y +C + S+ +F + + V+W +L+ Y Q + KA + + + +
Sbjct: 251 IDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSD 310
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+I+SVL+A A A + G IH + ++ E ++ V SALVDMY KCG + Q F+
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES--TFSALLCACCHGGLVN 424
M E+N++T NS+I G G A F D+ +G P + TF +LL AC G V
Sbjct: 371 MPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVE 430
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+G +IF M YGI+ EHY +V +LG AG +E+A+ FI +P +V GAL +
Sbjct: 431 NGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGALQNA 490
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C ++G L + A LF+ DP+ V+LSNT+A GRW + +R+++ G++K A
Sbjct: 491 CRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGIKKGA 550
Query: 545 GVSWVS 550
G SW++
Sbjct: 551 GYSWIT 556
>gi|449448940|ref|XP_004142223.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 291/547 (53%), Gaps = 6/547 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
+V++ + L +LH L K +L+ D F L+ +Y+ N L S+ LF+ P
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD--LPGLR 124
LWNS+I +Y +A +LF + ++K D T A + C++ +D + G R
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWG-R 384
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H A+ SG+ D+ +AL++ Y K + I A VF+ + D++ N+MIS FA
Sbjct: 385 GLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSM 444
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
F K+ +LF M + YT+V L++ + S L G+ IHGF +K+ + +++
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNT 504
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L MY C +A ++F DLV+W++LI+ Y + + GKAL F + + +
Sbjct: 505 SLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEP 563
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V I ++L + + A++ G +H Y + E+ +++A + MY++CG L +
Sbjct: 564 NSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEK 623
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F T+ R+I+++N++I G G+HG A F +++ G P+ +F+++L AC H GL
Sbjct: 624 IFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGL 683
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
G ++F M ++GI + HY MV LLG G+ EA +FI S+P D ++ ALL
Sbjct: 684 TVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALL 743
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
S C I N+ L E + +L E +P ++LSN YA G W +V+++R + + GL K
Sbjct: 744 SSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGK 803
Query: 543 EAGVSWV 549
G SW+
Sbjct: 804 PPGTSWI 810
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 214/454 (47%), Gaps = 21/454 (4%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
LVL+ ++ +H+ + L+ D T LV Y ++ A +F + P+R
Sbjct: 65 LVLKACGRLNAIGNGVRIHSFIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER 124
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN++I Y + +A LF + + L P++ T + AC E +L + +H
Sbjct: 125 DLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIH 184
Query: 128 GGAIVSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
G + +GL D+ +ALV Y + + +VF + ++V N++I+GF + G
Sbjct: 185 GYCLRNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVRNIVSWNAIITGFLNVGDC 243
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
K+L+L+ ML G D T++ +I E L +G +H +K + + ++ + L
Sbjct: 244 AKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNAL 303
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MY+ + S++ +FN++ D W+++I+ Y G + +A+ F K+ ++ K D
Sbjct: 304 LNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDV 363
Query: 307 VLIASVLAAA--AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
IA +L+ ++W G +H + ++ G EL + +AL+ MY K + VF
Sbjct: 364 RTIAIMLSLCNDLNDGSIW-GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVF 422
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC------- 417
E M ++I++N++I F +AFE F + E + + T +LL C
Sbjct: 423 EKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLV 482
Query: 418 ----CHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
HG + +G EI T + TE YI
Sbjct: 483 FGRSIHGFAIKNGLEINTSLNTSL-----TEMYI 511
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 197/399 (49%), Gaps = 19/399 (4%)
Query: 61 FDKTPQRSVFL-----WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
TP+++ + WNSII+ + + S + + + PD+ T + +AC
Sbjct: 12 LSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACG 71
Query: 116 E-NSDLPGLR---FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
N+ G+R F+ G +++ D +ALV Y K L+ EA KVF + + DLV
Sbjct: 72 RLNAIGNGVRIHSFIRGLDLIN----DVRVGTALVDFYCKCGLVAEASKVFVEMPERDLV 127
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N++ISG+ C + +++ LF M + G TP+ T+V L+ E L +GQ IHG+C
Sbjct: 128 SWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYC 187
Query: 232 LKSS-FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
L++ FD YV + LV Y R + + S + VF+ + ++V+W+A+ITG+ GD KA
Sbjct: 188 LRNGLFDMDAYVGTALVGFYMRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAKA 246
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L + + ++G K D V + V+ A A+ + G +H I+ + + +AL++M
Sbjct: 247 LKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNM 306
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
YS G L +F + + +NS+I GF +A F + + + D T
Sbjct: 307 YSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTI 366
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+ +L C +NDG I+ R + +++ E Y+
Sbjct: 367 AIMLSLCND---LNDG-SIWGRGLHAHAMKSGIELDAYL 401
>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 973
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/546 (30%), Positives = 278/546 (50%), Gaps = 3/546 (0%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+ ++L + S L K++H V + + A + +Y + AR +F +
Sbjct: 300 YIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQMK 359
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS--ENSDLPGL 123
+ + WN++I A + + LF +LLR+ L PD FT + RACS E S G
Sbjct: 360 EVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVG- 418
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R VH A+ +G+ DS S+AL+ YSK ++EA +F DL N+M+ GF
Sbjct: 419 RQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTVS 478
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+ ++L+LF M G+ D+ T L G+ IH +K F +V
Sbjct: 479 DNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVI 538
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
S ++ MY +C M SA VFN + PD V W+ +I+G + G+ +AL+ + ++ + G +
Sbjct: 539 SGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQ 598
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D A+++ A + + G IH +++ V ++LVDMY+KCG + +
Sbjct: 599 PDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGL 658
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F M+ R++ +N++I+GL HG +A FF ++ +G+ PD TF +L AC H GL
Sbjct: 659 FRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLT 718
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+D + F M + YG++ + EHY +V L AG+++EA + S+P + LL+
Sbjct: 719 SDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSMPFEASATMYRTLLN 778
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C + G+ + E VA +LF DP A V+LSN YA +W++ + R+ + ++KE
Sbjct: 779 ACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWENAVSARNMMKRVNVKKE 838
Query: 544 AGVSWV 549
G SW+
Sbjct: 839 PGFSWI 844
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/493 (25%), Positives = 225/493 (45%), Gaps = 46/493 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S S ++ L K L D F A LV +YA + AR+LFD+ P R V LWN +++
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY ++ LF R+ L+PD C++ +R I+ G+G+
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPD-----CVS-----------VR-----TILMGVGK 235
Query: 138 DSITSSAL--VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
++ L V AY A K+F D D+ + N +S + G +++ F
Sbjct: 236 KTVFERELEQVRAY--------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVDCFRD 287
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M++ D T + ++S + + L +G+ IHG ++ +D + V++ ++MY +
Sbjct: 288 MIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGS 347
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+N A +F + DL++W+ +I+G ++ G +L F L G D I SVL A
Sbjct: 348 VNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRA 407
Query: 316 AAKSANVW-PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+ + G +H ++ G L VS+AL+D+YSK G + +F ++ +
Sbjct: 408 CSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFDLAS 467
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV--NDGREIFTR 432
+N+++ G + +A F + E+G D+ TF+ A G LV G++I
Sbjct: 468 WNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFAN--AAKAAGCLVRLQQGKQIHAV 525
Query: 433 MTEEYGIQAKTEHYIYMVK-LLGL---AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
+ I+ + + ++++ +L + G ++ A +P P D A + ++S C
Sbjct: 526 V-----IKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWT-TVISGCVEN 579
Query: 489 GNSDLAEIVAHQL 501
G + A HQ+
Sbjct: 580 GEEEQALFTYHQM 592
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 190/419 (45%), Gaps = 35/419 (8%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
F +L + + L K HA++ + L D + L+ +YA L SAR LFD TPQ
Sbjct: 17 FSILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQ 76
Query: 67 --RSVFLWNSIIRAYALAHRFNDAKS------LFKNLLRTQLKPDNFTYACITRACSENS 118
R + +N+I+ AYA +D + +F+ L ++ + T + + + C
Sbjct: 77 SDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYG 136
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
+ G A+ GL D + ALV Y+K I EA +FD + D+VL N M+
Sbjct: 137 SPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMK 196
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
+ G D+ L LF R G PD ++ ++ G+ + ++ +
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFE----------RELEQV 246
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
Y + + V C + + D+ W+ ++ Y Q G+ +A+ FR +
Sbjct: 247 RAYATKLFV-------CDDDS----------DVTVWNKTLSSYLQAGEGWEAVDCFRDMI 289
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
D + +L+ A ++ G IHG V++ G++ V V+++ ++MY K G +
Sbjct: 290 KSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVN 349
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++F M E ++I++N+VI G G + F D++ GL PD+ T +++L AC
Sbjct: 350 YARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRAC 408
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 175/387 (45%), Gaps = 4/387 (1%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + ++ S +S +++H KA ++ D F +T L+ +Y+ + A +LF
Sbjct: 399 FTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFH 458
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ WN+++ + ++ + +A LF + K D T+A +A L
Sbjct: 459 NQDGFDLASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQ 518
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +H I D S ++ Y K + A KVF+ + PD V ++ISG
Sbjct: 519 GKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVE 578
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +++L + M G PDEYT L+ + L G+ IH +K + +V
Sbjct: 579 NGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFV 638
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV MYA+C + AY +F + + W+A+I G +Q G+ +AL +F ++ +G
Sbjct: 639 MTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGV 698
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQ--HGFELSVMVSSALVDMYSKCGYLGLG 360
D V VL+A + S + A + +Q +G E + S LVD S+ G++
Sbjct: 699 TPDRVTFIGVLSACSHSG-LTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEA 757
Query: 361 IQVFETMS-ERNIITYNSVILGLGLHG 386
+V +M E + Y +++ + G
Sbjct: 758 EKVVSSMPFEASATMYRTLLNACRVQG 784
>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
lyrata]
Length = 1057
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/532 (31%), Positives = 274/532 (51%), Gaps = 6/532 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA + + +D L+ Y + +A LFD P +++ W +++ Y
Sbjct: 269 KQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQN 328
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF ++ + LKPD F + I +C+ L VH I + LG DS +
Sbjct: 329 SLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVT 388
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF-WD--KSLQLF-DWMLR 198
++L+ Y+K + EA KVFD + D+VL N+MI G++ G W+ +L +F D R
Sbjct: 389 NSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFR 448
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
L + P T V L+ + L + + IHG K + + S L+++Y+ C C+
Sbjct: 449 LIR-PSLLTFVSLLRASASLTSLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKD 507
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
+ VF+ + DLV W+++ +GY QQ + +AL F +L + + D ++ AA
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFSGYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGN 567
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A++ G H +++ G E + +++AL+DMY+KCG + F++ + R+++ +NSV
Sbjct: 568 LASLQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + ++ +G+ P+ TF +L AC H GLV DG + F M +G
Sbjct: 628 ISSYANHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFG 686
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ +TEHY+ MV LLG AG L EA I +P V +LLS C GN +LAE A
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEYAA 746
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+DP+ +LSN YA G W D K+R+ + G+ KE G SW+
Sbjct: 747 EMAILSDPKDSGSFTLLSNIYASKGMWTDAKKVRERMKFEGVVKEPGRSWIE 798
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 103/413 (24%), Positives = 199/413 (48%), Gaps = 3/413 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L + + K+ RD + T L+ Y + AR++FD P++S W ++I
Sbjct: 169 QLQSFLVKSRFDRDVYVGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + LF L+ + PD + + + ACS L G + +H + G +D+ +
Sbjct: 229 RSYVSLQLFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMN 288
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ +Y K + A K+FDG+ + +++ +++SG+ ++++LF M + G P
Sbjct: 289 VLIDSYVKCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKP 348
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D + +++ L G +H + +K++ + YV++ L+ MYA+C+C+ A VF
Sbjct: 349 DMFACSSILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVF 408
Query: 264 NSLFHPDLVTWSALITGYSQQG---DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+ D+V ++A+I GYS+ G + AL F + + + + S+L A+A
Sbjct: 409 DIFAADDVVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ IHG + + G L + SAL+ +YS C L VF+ M ++++ +NS+
Sbjct: 469 SLGLSKQIHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFS 528
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G +A F ++ PDE TF ++ A + + G+E ++
Sbjct: 529 GYVQQSENEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQL 581
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 205/447 (45%), Gaps = 5/447 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L ++HA KA+L D + L+ +YA + L AR +FD
Sbjct: 356 ILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADD 415
Query: 69 VFLWNSIIRAYA---LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
V L+N++I Y+ +DA ++F ++ ++P T+ + RA + + L +
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ 475
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG GL D SAL+ YS + ++ VFD + DLV+ NSM SG+
Sbjct: 476 IHGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSE 535
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++L LF + PDE+T V +++ + L +GQ H LK + Y+++
Sbjct: 536 NEEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNA 595
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MYA+C A+ F+S D+V W+++I+ Y+ G+ KAL K+ +G + +
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPN 655
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ VL+A + + V G +++ G E +V + + G L ++ E
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNEARELIE 715
Query: 366 TMSER-NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
M + I + S++ G G + E+ ++ D +F+ L G+
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAG-NVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWT 774
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVK 451
D +++ RM E ++ +I + K
Sbjct: 775 DAKKVRERMKFEGVVKEPGRSWIEINK 801
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 192/398 (48%), Gaps = 6/398 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + + L D + + L+ LY+ + AR +F+K P+R++ W++++ A
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 85 FNDAKSLFKNLLRTQLK-PDNFTYACITRACS--ENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ ++ +F + RT+ P+ + + +ACS + S + + + S RD
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L+ Y K ID A VFD + + V +MISG G SLQLF ++
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD Y L ++S L G+ IH L+ + + +VL+ Y +C + +A+
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAHK 305
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+ + + ++++W+ L++GY Q + +A+ F + G K D +S+L + A
Sbjct: 306 LFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSCASLHA 365
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +H Y I+ V+++L+DMY+KC L +VF+ + +++ +N++I G
Sbjct: 366 LEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDVVLFNAMIEG 425
Query: 382 ---LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
LG + A F D+ + + P TF +LL A
Sbjct: 426 YSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 158/296 (53%), Gaps = 5/296 (1%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG IVSGL D+ S+ L+ YS+ + A KVF+ + + +LV ++M+S H GF
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 186 WDKSLQLF-DWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
+++SL +F D+ +P+EY L I SGL V Q + F +KS FD Y
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQ-LQSFLVKSRFDRDVY 184
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V ++L+ Y + ++ A VF++L VTW+ +I+G + G +L F +L
Sbjct: 185 VGTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGN 244
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D ++++VL+A + + G IH +++++G E + + L+D Y KCG +
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKCGRVRAAH 304
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++F+ M +NII++ +++ G + +A E F + + GL PD S++L +C
Sbjct: 305 KLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTSC 360
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 103/206 (50%), Gaps = 3/206 (1%)
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+HG + S + Y+S++L+++Y+R M A VF + +LVTWS +++ + G
Sbjct: 66 VHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHGF 125
Query: 287 YGKALYYFRKL-NMQGKKADPVLIASVLAAAA--KSANVWPGAVIHGYVIQHGFELSVMV 343
Y ++L F + + +++S + A + + W + ++++ F+ V V
Sbjct: 126 YEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVKSRFDRDVYV 185
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
+ L+D Y K G + VF+ + E++ +T+ ++I G G +Y + + F ++E +
Sbjct: 186 GTLLIDFYLKEGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEGNV 245
Query: 404 NPDESTFSALLCACCHGGLVNDGREI 429
PD S +L AC + G++I
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQI 271
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 96/190 (50%), Gaps = 9/190 (4%)
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
V+HG +I G EL +S+ L+++YS+ G + +VFE M ERN++T+++++ HG
Sbjct: 65 VVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKMPERNLVTWSTMVSACNHHG 124
Query: 387 FTYQAFEFFRDIIEKGLN-PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEH 445
F ++ F D N P+E S+ + AC GL GR + ++ + + ++++ +
Sbjct: 125 FYEESLVVFLDFWRTRKNSPNEYILSSFIQAC--SGLDGSGRWMVFQL-QSFLVKSRFDR 181
Query: 446 YIYMVKLLG----LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+Y+ LL GN++ A +LP+ ++S C G S ++ + +QL
Sbjct: 182 DVYVGTLLIDFYLKEGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQL 240
Query: 502 FENDPRKGAY 511
E + Y
Sbjct: 241 MEGNVVPDGY 250
>gi|449502637|ref|XP_004161700.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 847
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 291/547 (53%), Gaps = 6/547 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
+V++ + L +LH L K +L+ D F L+ +Y+ N L S+ LF+ P
Sbjct: 266 LVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSDNGSLESSWALFNAVPT 325
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD--LPGLR 124
LWNS+I +Y +A +LF + ++K D T A + C++ +D + G R
Sbjct: 326 SDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIMLSLCNDLNDGSIWG-R 384
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H A+ SG+ D+ +AL++ Y K + I A VF+ + D++ N+MIS FA
Sbjct: 385 GLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVFEKMRGLDVISWNTMISAFAQSM 444
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
F K+ +LF M + YT+V L++ + S L G+ IHGF +K+ + +++
Sbjct: 445 FRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLVFGRSIHGFAIKNGLEINTSLNT 504
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L MY C +A ++F DLV+W++LI+ Y + + GKAL F + + +
Sbjct: 505 SLTEMYINCGDERAATNMFTRCPQRDLVSWNSLISSYIKNDNAGKALLLFNHM-ISELEP 563
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V I ++L + + A++ G +H Y + E+ +++A + MY++CG L +
Sbjct: 564 NSVTIINILTSCTQLAHLPLGQCLHAYTTRREVSLEMDASLANAFITMYARCGKLQYAEK 623
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F T+ R+I+++N++I G G+HG A F +++ G P+ +F+++L AC H GL
Sbjct: 624 IFCTLQTRSIVSWNAMITGYGMHGRGRDATLAFAQMLDDGFKPNNVSFASVLSACSHSGL 683
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
G ++F M ++GI + HY MV LLG G+ EA +FI S+P D ++ ALL
Sbjct: 684 TVTGLQLFHSMVRDFGIAPQLTHYGCMVDLLGRGGHFSEAIAFINSMPIEPDASIWRALL 743
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
S C I N+ L E + +L E +P ++LSN YA G W +V+++R + + GL K
Sbjct: 744 SSCQIKSNNKLLETIFGKLVELEPSNPGNFILLSNIYAAAGLWSEVVQIRKWLRERGLGK 803
Query: 543 EAGVSWV 549
G SW+
Sbjct: 804 PPGTSWI 810
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/454 (25%), Positives = 214/454 (47%), Gaps = 21/454 (4%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
LVL+ ++ +H+ + L+ D T LV Y ++ A +F + P+R
Sbjct: 65 LVLKACGRLNAIGNGVRIHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPER 124
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN++I Y + +A LF + + L P++ T + AC E +L + +H
Sbjct: 125 DLVSWNALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIH 184
Query: 128 GGAIVSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
G + +GL D+ +ALV Y + + +VF + ++V N++I+GF + G
Sbjct: 185 GYCLRNGLFDMDAYVGTALVGFYMRFDAVLSH-RVFSLMLVRNIVSWNAIITGFLNVGDC 243
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
K+L+L+ ML G D T++ +I E L +G +H +K + + ++ + L
Sbjct: 244 AKALKLYSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNAL 303
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MY+ + S++ +FN++ D W+++I+ Y G + +A+ F K+ ++ K D
Sbjct: 304 LNMYSDNGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDV 363
Query: 307 VLIASVLAAA--AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
IA +L+ ++W G +H + ++ G EL + +AL+ MY K + VF
Sbjct: 364 RTIAIMLSLCNDLNDGSIW-GRGLHAHAMKSGIELDAYLGNALLSMYVKHNQITAAQYVF 422
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC------- 417
E M ++I++N++I F +AFE F + E + + T +LL C
Sbjct: 423 EKMRGLDVISWNTMISAFAQSMFRAKAFELFLMMCESEIKFNSYTIVSLLAFCKDGSDLV 482
Query: 418 ----CHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
HG + +G EI T + TE YI
Sbjct: 483 FGRSIHGFAIKNGLEINTSLNTSL-----TEMYI 511
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 194/396 (48%), Gaps = 13/396 (3%)
Query: 61 FDKTPQRSVFL-----WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
TP+++ + WNSII+ + + S + + + PD+ T + +AC
Sbjct: 12 LSSTPEQTHLVNVSKDWNSIIKHHTKLKNDHAILSTYTQMESLGITPDSATMPLVLKACG 71
Query: 116 E-NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCN 174
N+ G+R +H L D +ALV Y K L+ EA KVF + + DLV N
Sbjct: 72 RLNAIGNGVR-IHSCIRGLDLINDVRVGTALVDFYCKCGLVAEASKVFVEMPERDLVSWN 130
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
++ISG+ C + +++ LF M + G TP+ T+V L+ E L +GQ IHG+CL++
Sbjct: 131 ALISGYVGCLCYKEAVLLFVEMKKAGLTPNSRTVVALLLACGEMLELRLGQEIHGYCLRN 190
Query: 235 S-FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
FD YV + LV Y R + + S + VF+ + ++V+W+A+ITG+ GD KAL
Sbjct: 191 GLFDMDAYVGTALVGFYMRFDAVLS-HRVFSLMLVRNIVSWNAIITGFLNVGDCAKALKL 249
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
+ + ++G K D V + V+ A A+ + G +H I+ + + +AL++MYS
Sbjct: 250 YSSMLIEGIKFDAVTMLVVIQACAEYGCLRLGMQLHQLAIKFNLINDLFILNALLNMYSD 309
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
G L +F + + +NS+I GF +A F + + + D T + +
Sbjct: 310 NGSLESSWALFNAVPTSDAALWNSMISSYIGFGFHAEAIALFIKMRLERIKEDVRTIAIM 369
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
L C +NDG I+ R + +++ E Y+
Sbjct: 370 LSLCND---LNDG-SIWGRGLHAHAMKSGIELDAYL 401
>gi|357510067|ref|XP_003625322.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355500337|gb|AES81540.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1024
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 174/581 (29%), Positives = 295/581 (50%), Gaps = 37/581 (6%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILF 61
N L++E S ++ + K++ A + ++ F ++++ AL + L A +F
Sbjct: 158 NPTLLIME---SCSTMRQLKQIQARMTLTGIITHAFPVSRVIAFCALAHSGDLHYAHTIF 214
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
++ Q + F+WN++IR Y A + A S F + + +++ D+ ++ +AC + +
Sbjct: 215 NRVEQPNTFMWNTMIRGYQNARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVF 274
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
V+ G + + + L+ Y++ L+ A +VFD SD D+V +MI G+A
Sbjct: 275 EGESVYCVVWKMGFDCELLVRNGLIHFYAERGLLKNARQVFDESSDKDVVTWTTMIDGYA 334
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
++++++F+ ML P+E TL+ ++S + L +G+ +H + +
Sbjct: 335 AHDCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLS 394
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDL------------------------------ 271
+ + L+ MY +C+C+ A +F+ + D+
Sbjct: 395 LHNALLDMYVKCDCLVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKN 454
Query: 272 -VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
V WSA+I GYSQ ++L F ++ +G + SVL+A + + G IH
Sbjct: 455 AVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQ 514
Query: 331 Y-VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
Y V+ LSV + +A+VDMY+KCG + +VF TM ERN+I++N++I G +G
Sbjct: 515 YFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMPERNLISWNTMIAGYAANGRAK 574
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
QA F + G P+ TF +LL AC HGGL+++GRE F M +YGI+ + HY M
Sbjct: 575 QAINVFDQMRNMGFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACM 634
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
V LLG G LEEAY I ++P A GALL+ C ++GN +LA + AH L DP
Sbjct: 635 VDLLGRTGLLEEAYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDS 694
Query: 510 AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L+NT A D +W DV ++R + D G++K G S +
Sbjct: 695 GIYVLLANTCANDRKWSDVRRVRSLMKDKGVKKIPGYSLIE 735
>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 819
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 269/528 (50%), Gaps = 2/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H +++ D L+ LY + L +AR LFD R++ W ++I Y +
Sbjct: 241 RQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGY-MQ 299
Query: 83 HRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ FN +A ++F N+ + +PD F I +C + + R +H I + L D
Sbjct: 300 NSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYV 359
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+AL+ Y+K + EA VFD +++ D + N+MI G++ +++ +F M
Sbjct: 360 KNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSL 419
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P T V L+ + + + IHG +KS Y +S L+ +Y++C+ +N A
Sbjct: 420 RPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKT 479
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VFN L + D+V W+++I G++Q +A+ F +L + G + +++ A+ A+
Sbjct: 480 VFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLAS 539
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
++ G H ++I+ G + VS+AL+DMY+KCG++ G +FE+ ++I +NS+I
Sbjct: 540 MFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITT 599
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG +A + FR + E + P+ TF +L AC H G V +G F M Y I+
Sbjct: 600 YAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDIEP 659
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY +V L G +G L A FI +P AV +LLS CH++GN+++ A
Sbjct: 660 GIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAEMA 719
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP V+LSN YA G W DV LR + +G KE G SW+
Sbjct: 720 LLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWI 767
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/391 (31%), Positives = 202/391 (51%), Gaps = 1/391 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA A L D F L+R Y+ L AR LFD+ P R++ W S+I Y R
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 85 FNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ A SLF + + P+ F A + RAC+++ + VHG A+ L + +
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+ Y+KL +DEA+ VF + V N++I+G+A G +L+LFD M G P
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D + L +S L G+ IHG+ +S+ ++ V +VL+ +Y +C+ +++A +F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + + +LV+W+ +I+GY Q +A+ F + G + D S+L + A +W
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH +VI+ E V +AL+DMY+KC +L VF+ ++E + I+YN++I G
Sbjct: 340 QGRQIHAHVIKADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYS 399
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ +A F+ + L P TF +LL
Sbjct: 400 KNRDLAEAVNIFQRMRFFSLRPSLLTFVSLL 430
Score = 192 bits (487), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 204/406 (50%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +++S +++H + K L + + T L+ LYA + A ++F P R+
Sbjct: 126 VLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHALPVRT 185
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN++I YA A LF + ++PD F A ACS L G R +HG
Sbjct: 186 PVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHG 245
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A S D+ + L+ Y K S + A K+FD + +LV +MISG+ F +
Sbjct: 246 YAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSWTTMISGYMQNSFNAE 305
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ +F M + G PD + +++ + + G+ IH +K+ ++ +YV + L+
Sbjct: 306 AITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALID 365
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A VF++L D ++++A+I GYS+ D +A+ F+++ + +
Sbjct: 366 MYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLT 425
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
S+L ++ + IHG +I+ G L + +SAL+D+YSKC + VF +
Sbjct: 426 FVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLH 485
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
++++ +NS+I G + +A + F ++ G+ P+E TF AL+
Sbjct: 486 YKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALV 531
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 162/305 (53%), Gaps = 1/305 (0%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H A V+G D ++ L+ YS L + +A +FD + +LV S+IS + G
Sbjct: 40 IHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGR 99
Query: 186 WDKSLQLFDWMLRLG-KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
D ++ LF + + P+E+ L ++ + +S+G+ +HG +K D+ YV +
Sbjct: 100 DDCAISLFVAFQKASCEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGT 159
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+++YA+ CM+ A VF++L VTW+ +ITGY+Q G G AL F ++ ++G +
Sbjct: 160 ALINLYAKLGCMDEAMLVFHALPVRTPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRP 219
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D ++AS ++A + + G IHGY + E V + L+D+Y KC L ++F
Sbjct: 220 DRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLF 279
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ M RN++++ ++I G + F +A F ++ + G PD +++L +C +
Sbjct: 280 DCMEYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIW 339
Query: 425 DGREI 429
GR+I
Sbjct: 340 QGRQI 344
>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 672
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 274/506 (54%), Gaps = 13/506 (2%)
Query: 58 RILFDK-TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
R +F K + SV+ WNSII +A + A F ++ + L P+ T+ C ++CS
Sbjct: 39 RSMFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSS 98
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
DL + +H A V G G D +SAL+ YSK +++A K+FD + + ++V SM
Sbjct: 99 LYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSM 158
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTP-----------DEYTLVGLISGLWEPSLLSVGQ 225
ISG+ +++ LF L + +T D L +IS + SV +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
+HG +K F+ V + L+ YA+C ++ + VF+ + D+ +W++LI Y+Q G
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNG 278
Query: 286 DYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
+A F + +G+ + + V +++VL A A S + G IH V++ E +++V
Sbjct: 279 LSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVG 338
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+++VDMY KCG + + + F+ + +N+ ++ ++ G G+HG +A + F ++I G+
Sbjct: 339 TSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIK 398
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
P+ TF ++L AC H GL+ +G F +M E+ ++ EHY MV LLG AG L+EAY
Sbjct: 399 PNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYG 458
Query: 465 FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGR 524
I + D V G+LL C I+ N +L EI A +LF+ DP Y V+LSN YA+ GR
Sbjct: 459 LIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGR 518
Query: 525 WDDVMKLRDDIVDNGLRKEAGVSWVS 550
WDDV ++R + ++GL K G S V
Sbjct: 519 WDDVERMRILMKNHGLLKTPGYSIVE 544
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 22/367 (5%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F A+ L+ +Y+ L AR LFD+ P+R+V W S+I Y R +A LFK L
Sbjct: 120 DIFVASALIDMYSKCGYLNDARKLFDEIPERNVVSWTSMISGYVQNERAREAVFLFKEFL 179
Query: 97 -----------RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSAL 145
+ D+ C+ AC+ VHG A+ G + L
Sbjct: 180 LVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTL 239
Query: 146 VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-D 204
+ AY+K I + KVFDG+ + D+ NS+I+ +A G ++ LF M++ G+ +
Sbjct: 240 MDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYN 299
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TL ++ L +G+ IH +K + V + +V MY +C + A F+
Sbjct: 300 AVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFD 359
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA-----KS 319
L ++ +W+ ++ GY G +A+ F ++ G K + + SVLAA + K
Sbjct: 360 RLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKE 419
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSV 378
W + + ++ G E S +VD+ + GYL + + M + + I + S+
Sbjct: 420 GWHWFNKMKCEFDVEPGIEH----YSCMVDLLGRAGYLKEAYGLIQEMKVKPDFIVWGSL 475
Query: 379 ILGLGLH 385
+ +H
Sbjct: 476 LGACRIH 482
>gi|255544622|ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547280|gb|EEF48775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 597
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/558 (30%), Positives = 293/558 (52%), Gaps = 15/558 (2%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
+L+ +L+L + L + +H+ + + + +TKL+ Y +AR +FD+
Sbjct: 38 SLYMKILQLCIETEDLKQGCLIHSHIIRNGFDSNLHLSTKLIIFYVKFGETINARKVFDR 97
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P+R+V W + I YA + DA +F + R ++ + FTY + RAC+ GL
Sbjct: 98 MPERNVVSWTAQISGYAKNGHYQDALLVFSQMGRAGVRANQFTYGSVLRACT------GL 151
Query: 124 RFVHGGAIVSGLGRDS------ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
R + G + G + + SALV +SK +++A +F+ +S+ D+V N++I
Sbjct: 152 RCLERGMQIHGCIQKNRFIGNLFVQSALVDLHSKCGNMEDARYLFETMSERDVVSWNAVI 211
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSF 236
G+A F D S ++F M+ G TPD +TL ++ + L+ V Q IHG ++ F
Sbjct: 212 GGYAAQDFNDDSFRMFYSMMGEGVTPDCFTLGSVLKASSRANNLIKVCQ-IHGIIIQLGF 270
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFR 295
S+ ++ L+ YA+ M SA ++ S+ D+++++A++TGY+++ Y + AL F+
Sbjct: 271 GSHIDLNGSLIDAYAKSEGMKSASALYKSMLKKDVISFTAIMTGYARKCSYSREALDLFK 330
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + D V ++L A A++ G IH I++ V +ALVDMY+K G
Sbjct: 331 DMQHIFMEIDDVTFCTMLNVCADIASLSIGRQIHALAIKYKPSYDVATGNALVDMYAKSG 390
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + F M E+N+I++ S+I G G HG+ ++A ++ + +GL P++ TF +LL
Sbjct: 391 EIEDATRAFYEMKEKNVISWTSLITGYGKHGYGHEAIALYKKMEYEGLKPNDITFLSLLF 450
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H GL +G E F M +Y I + EHY M+ L G LEEAY+ I + +
Sbjct: 451 ACSHSGLTGEGWECFNNMITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNS 510
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
++ GA+L C IYG+ L E+ A L DP A V+L+ YA G WD ++R+ +
Sbjct: 511 SLWGAILGACSIYGHMSLGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLM 570
Query: 536 VDNGLRKEAGVSWVSGSS 553
L+K G S + ++
Sbjct: 571 EYRSLKKIPGYSIIQSTN 588
>gi|225445374|ref|XP_002281645.1| PREDICTED: pentatricopeptide repeat-containing protein At5g55740,
chloroplastic-like [Vitis vinifera]
Length = 858
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 279/545 (51%), Gaps = 39/545 (7%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L S + +L K+ HA+ SL D + ++ Y+ ++ A ++F + ++ V
Sbjct: 290 LSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDV 349
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WN +I +Y H+ A ++ + L+ D+ T + I A + S++ + H
Sbjct: 350 VTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCY 409
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
I L D + +++++ Y+K ID+A KVFD ++ DLVL N++++ +A G ++
Sbjct: 410 CIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEA 469
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L+LF + ++ P P+++S I GF
Sbjct: 470 LKLF-YQMQFDSVP--------------PNVISWNSVILGFL------------------ 496
Query: 250 YARCNCMNSAYHVFNSL----FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
R +N A +F+ + F P+L+TW+ LI+G +Q G +A+ +F+K+ G +
Sbjct: 497 --RNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPS 554
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
I SVL A ++W G IHG++ +H F LSV V+++LVDMY+KCG + +VF
Sbjct: 555 IASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFH 614
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
MS + + YN++I LHG +A F+ + ++G+ PD TF+++L AC H GLVN+
Sbjct: 615 MMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNE 674
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G +F M ++ + EHY +V LL GNL+EA I ++P D + G+LL+ C
Sbjct: 675 GLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTAC 734
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
+ +L E ++ LF+ +P V LSN YA GRW +V +RD + GLRK G
Sbjct: 735 REHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPG 794
Query: 546 VSWVS 550
SW+
Sbjct: 795 CSWIQ 799
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/526 (26%), Positives = 258/526 (49%), Gaps = 17/526 (3%)
Query: 17 QSLSRTKELHALVAKAS--LLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
++L +++HA + K ++ + TKLV YA + A LF + R+VF W +
Sbjct: 93 RALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWAA 152
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFVHGGAIVS 133
I+ DA F + + PDNF + +AC + L GL + VHG +
Sbjct: 153 IVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACG-SLQLIGLGKGVHGYVLKM 211
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G G SS+LV Y K ++++A KVFD + + ++V NSMI G+ G +++ +F
Sbjct: 212 GFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDVF 271
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M G P T+ +S L G+ H + +S D + + S +++ Y++
Sbjct: 272 YDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKV 331
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ A VF+ + D+VTW+ LI+ Y Q GKAL + + + D V ++S+L
Sbjct: 332 GLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSIL 391
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+A+A ++N+ G H Y I+ E V+V+++++DMY+KC + +VF++ +ER+++
Sbjct: 392 SASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLV 451
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+N+++ G + +A + F + + P+ ++++++ G VN+ +++F++M
Sbjct: 452 LWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQM 511
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP----KPVDPAVSGALLSCCHI-- 487
+ G Q + ++ L +G EA F + +P +++ LL+C I
Sbjct: 512 -QSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPS 570
Query: 488 --YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
YG + I H+ + P + L + YA+ G D+ K+
Sbjct: 571 LWYGRAIHGFITRHEFCLSVPVATS----LVDMYAKCGSIDEAKKV 612
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 236/502 (47%), Gaps = 39/502 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S Q + K +H V K F ++ LV +Y VL AR +FD +++
Sbjct: 188 VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKN 247
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS+I Y +A +F ++ ++P T A A + L + H
Sbjct: 248 VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHA 307
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI++ L D+I S+++ YSK+ LI++A VF + + D+V N +IS + K
Sbjct: 308 IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGK 367
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L + M D TL ++S S + +G+ H +C++ + +S V++ ++
Sbjct: 368 ALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIID 427
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ A VF+S DLV W+ L+ Y+Q G G+AL F + MQ P +
Sbjct: 428 MYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQ--MQFDSVPPNV 485
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I+ W ++ GF + V+ A DM+S+ LG
Sbjct: 486 IS------------WNSVIL-------GFLRNGQVNEA-KDMFSQMQSLGF--------- 516
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ N+IT+ ++I GL GF Y+A FF+ + E G+ P ++ +++L AC + GR
Sbjct: 517 QPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRA 576
Query: 429 IFTRMTE-EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
I +T E+ + +V + G+++EA ++ + + + A++S +
Sbjct: 577 IHGFITRHEFCLSVPVA--TSLVDMYAKCGSIDEAKK-VFHMMSSKELPIYNAMISAYAL 633
Query: 488 YGNSDLAEIVAHQLFENDPRKG 509
+G + + A LF++ ++G
Sbjct: 634 HGQA----VEALALFKHLQKEG 651
>gi|255538308|ref|XP_002510219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550920|gb|EEF52406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 282/525 (53%), Gaps = 6/525 (1%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ K +H K+ L DP L +YA L +A LF++ +SV WN++I AY
Sbjct: 561 QGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYG 620
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
F++A +FK ++ ++ T + A + +H I GL D+
Sbjct: 621 QNGFFDEAMFVFKRMIGAGVEVSQVTIMSLPSANANPES------IHCYTIKVGLADDAS 674
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++L+ Y++ D A ++ + +LV ++I+ +A G ++ F M +L
Sbjct: 675 VVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAIITSYAEAGNLGLVMESFSQMHQLN 734
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD ++ ++ G+ +P + +G HG+ +KS D+++ V++ L+SMY++ N + + +
Sbjct: 735 MKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLDTFNLVTNGLISMYSKFNNVEALF 794
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F+ + L++W+++I+G Q G A+ F ++ M G D + IAS+L+ ++
Sbjct: 795 GLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQMKMHGCNPDAITIASLLSGCSQLG 854
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G +H Y++++ E+ V +AL+ MY+KCG + +VF+++ + + T+N++I
Sbjct: 855 YLQFGERLHSYILRNKLEMEDFVGTALIHMYTKCGSIVHAERVFKSIGKPCLATWNAMIS 914
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +GF ++A + ++ E+G+ PD+ TF +L AC HGGL+++GR F MT+ Y +
Sbjct: 915 GYSCYGFEHKALTCYSEMQEQGVEPDKITFLGVLAACTHGGLIHEGRRYFQIMTKVYDMV 974
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+H MV LL G EEA FI ++ K D AV GA LS C I+ L E +A +
Sbjct: 975 PTLQHCACMVGLLARVGLFEEALLFIKNMEKEPDSAVWGAFLSACCIHQEVKLGEYLAKK 1034
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
L+ D R G V++SN YA GRWDDV ++R+ + D G +G
Sbjct: 1035 LYLLDCRNGGLYVLMSNLYAVTGRWDDVARVREMMKDAGGDGNSG 1079
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/453 (27%), Positives = 213/453 (47%), Gaps = 12/453 (2%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ +T L+ LY + A FD P R V WN++I Y+ A LF +L+
Sbjct: 478 YVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSALELFVQMLKL 537
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
P T + +C + + + +HG I SGL D +AL + Y+K ++ A
Sbjct: 538 GFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMYAKCGDLEAA 597
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F+ + D +V N+MI + GF+D+++ +F M+ G + T++ L P
Sbjct: 598 EYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIMSL------P 651
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
S + + IH + +K V + L+ MYAR + A ++ SL +LV+ +A+I
Sbjct: 652 SANANPESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQKNLVSLTAII 711
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
T Y++ G+ G + F +++ K D V + S+L A ++ G V HGY I+ G +
Sbjct: 712 TSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFHGYAIKSGLD 771
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V++ L+ MYSK + +F M E+ +I++NSVI G G A E F +
Sbjct: 772 TFNLVTNGLISMYSKFNNVEALFGLFSGMHEKPLISWNSVISGCVQAGRASHAIELFCQM 831
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLA 456
G NPD T ++LL C G + G + + + + + E ++ ++ +
Sbjct: 832 KMHGCNPDAITIASLLSGCSQLGYLQFGERLHSYILRN---KLEMEDFVGTALIHMYTKC 888
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
G++ A S+ KP A A++S YG
Sbjct: 889 GSIVHAERVFKSIGKPC-LATWNAMISGYSCYG 920
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 164/349 (46%), Gaps = 19/349 (5%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
I G+ + S+AL+ Y KL + A FD + D+V N++I G++ G+ +L
Sbjct: 469 IKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGYDFSAL 528
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+LF ML+LG P + TLVGL+ + L+ G+ IHGF +KS V + L SMY
Sbjct: 529 ELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNALTSMY 588
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + +A ++F + +V+W+ +I Y Q G + +A++ F+++ G + V I
Sbjct: 589 AKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVSQVTIM 648
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+ +A A + IH Y I+ G V ++L+ MY++ G ++ ++ ++
Sbjct: 649 SLPSANANPES------IHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLYWSLPQK 702
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC-----------H 419
N+++ ++I G E F + + + PD ++L H
Sbjct: 703 NLVSLTAIITSYAEAGNLGLVMESFSQMHQLNMKPDSVAMLSILHGIADPVHICIGHVFH 762
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
G + G + F +T G+ + + + L GL + E W+
Sbjct: 763 GYAIKSGLDTFNLVTN--GLISMYSKFNNVEALFGLFSGMHEKPLISWN 809
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 119/245 (48%), Gaps = 7/245 (2%)
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
I +K D + YVS+ L+ +Y + ++ A++ F+ + D+V+W+ALI GYS+ G
Sbjct: 464 IQNHLIKRGIDQFVYVSTALLDLYMKLGRVSYAHNAFDYMPIRDVVSWNALICGYSRNGY 523
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
AL F ++ G + +L + + V+ G IHG+ I+ G L V +A
Sbjct: 524 DFSALELFVQMLKLGFCPRQTTLVGLLPSCGQLELVFQGKSIHGFGIKSGLHLDPQVKNA 583
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L MY+KCG L +FE M +++++++N++I G +GF +A F+ +I G+
Sbjct: 584 LTSMYAKCGDLEAAEYLFEEMMDKSVVSWNTMIGAYGQNGFFDEAMFVFKRMIGAGVEVS 643
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
+ T +L A N E T + G+ ++ + G+ + A
Sbjct: 644 QVTIMSLPSA-------NANPESIHCYTIKVGLADDASVVTSLICMYARYGSTDHAELLY 696
Query: 467 WSLPK 471
WSLP+
Sbjct: 697 WSLPQ 701
>gi|224106429|ref|XP_002314162.1| predicted protein [Populus trichocarpa]
gi|222850570|gb|EEE88117.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/528 (31%), Positives = 278/528 (52%), Gaps = 2/528 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+ H+ + K + + + + +V +YA + SAR+LFD+ PQR+V WNS+I Y +
Sbjct: 90 QAHSTILKLGFISNVYICSAVVDMYAKCGEISSARVLFDQMPQRTVVTWNSLIYGYLAVN 149
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF +L+ + F+ + CS+ VHG + +GLG + + +
Sbjct: 150 CPKIAIELFIKMLKAAINVSAFSVSSCLAGCSQLEAREVGTQVHGLILKTGLGYNVVVGT 209
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+LV YSK +D++ VFD + + +++ SM++G++ D+++ L M+ P
Sbjct: 210 SLVDMYSKCGDVDDSRLVFDHMVNRNVITWTSMVTGYSQIEKPDEAMALVKEMVLQDLRP 269
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC-MNSAYHV 262
+ T L+S P LS +H ++ +S Y+++ LV++Y++C+ + V
Sbjct: 270 NCVTYNSLLSSFSGPDCLSYCLQVHCCIIQLGLESNVYIAATLVTVYSKCSSSLEDFKKV 329
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+ + D + W+A+I GYS+ G + +AL F ++ G D + SV+ A S+ +
Sbjct: 330 CSVVMTCDNIAWNAVIAGYSKLGRHEEALRCFHEMKQAGIDIDSYTLTSVVGAIGNSSFL 389
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + + G+ + V + LV MY++CG +G +VF M E ++I++N+++
Sbjct: 390 EEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTAF 449
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA- 441
HG+ +A E F + + + P+ STF A+LCAC H G V+ G E F M + ++
Sbjct: 450 AHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACSHVGFVDKGIEYFDTMKSDILLEPL 509
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
K EHY +V G AG L EA +FI S+P P+V ALLS ++GN ++A A +L
Sbjct: 510 KVEHYASLVDTFGRAGYLNEAEAFINSMPIVPAPSVYKALLSASLVHGNREIAARSAKKL 569
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E P A V+LS+ DG WDD LR + D GLRK+ G SW
Sbjct: 570 LELWPNDPATYVLLSSVLTVDGNWDDAADLRKLMCDRGLRKKPGYSWT 617
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 110/217 (50%)
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G + Y L ++S + +G H LK F S Y+ S +V MYA+C ++
Sbjct: 62 RHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCGEIS 121
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
SA +F+ + +VTW++LI GY A+ F K+ ++S LA +
Sbjct: 122 SARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLAGCS 181
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G +HG +++ G +V+V ++LVDMYSKCG + VF+ M RN+IT+ S
Sbjct: 182 QLEAREVGTQVHGLILKTGLGYNVVVGTSLVDMYSKCGDVDDSRLVFDHMVNRNVITWTS 241
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
++ G +A ++++ + L P+ T+++LL
Sbjct: 242 MVTGYSQIEKPDEAMALVKEMVLQDLRPNCVTYNSLL 278
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 75/148 (50%), Gaps = 7/148 (4%)
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ G ++P + +++ AKS + G H +++ GF +V + SA+VDMY+KCG
Sbjct: 59 EFTRHGSLSNPYFLNKIVSFCAKSGSFHLGIQAHSTILKLGFISNVYICSAVVDMYAKCG 118
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ +F+ M +R ++T+NS+I G A E F +++ +N + S+ L
Sbjct: 119 EISSARVLFDQMPQRTVVTWNSLIYGYLAVNCPKIAIELFIKMLKAAINVSAFSVSSCLA 178
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKT 443
C + RE+ T++ +G+ KT
Sbjct: 179 GCSQL----EAREVGTQV---HGLILKT 199
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +HAL+ + + LV +YA + ++ +F + V WN+++ A
Sbjct: 389 LEEGKAMHALIHRTGYISHLNVQNGLVSMYARCGAIGDSKRVFWFMEEHDVISWNALLTA 448
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+A +A LF+ + +T++KP++ T+ + ACS
Sbjct: 449 FAHHGYGREAVELFEQMRKTEIKPNSSTFLAVLCACS 485
>gi|326506094|dbj|BAJ91286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 625
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 169/569 (29%), Positives = 281/569 (49%), Gaps = 39/569 (6%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD--------------- 62
SL + ++LHA + K+ D + ++R YA L AR L D
Sbjct: 6 SLLQARKLHATLLKSGYHGDAYRCNLVLRAYARGGALADARGLLDLMPSPTLVSYNTVLS 65
Query: 63 -------------------KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
P+R + WN+ I A A R DA F + T L PD
Sbjct: 66 GYASSSTPGLLDAALCLLDAMPERDSWSWNTAISGLARAGRTRDALRRFLQMTHTALVPD 125
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FTY+ ++ C DL R VH A+ +G+ D+ + + Y++L L+++A KVFD
Sbjct: 126 AFTYSIVSPCC--GVDLGSARQVHARAVKAGVFADACVGTGFIKLYAELGLMEDAGKVFD 183
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ DL+ N ++ G ++ F M G PDE+T +++GL E S
Sbjct: 184 CMPLRDLMSWNVLLDCGVRSGEAGSCMKEFLSMTGCGVQPDEFTFATVLNGLAELSAGLE 243
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
+H LKS + ++ + L+ +Y RC ++ A +F+++ D+V+W+A+I+G +
Sbjct: 244 AMQVHSIILKSGYLKDLFLCNSLLDLYGRCGYIDLAKKLFDAMLEKDVVSWTAVISGLAA 303
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G A FR++ + S++++ A ++ G H V++HG EL ++
Sbjct: 304 CGYQADAFDIFRQMLKAAMLPNSFTFGSIVSSCADVNDLGSGRQCHALVVKHGLELVPII 363
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE--- 400
+S VDMYSKC + I++FE M +R+II++N++I GL +G + ++ E + ++ +
Sbjct: 364 ASCFVDMYSKCAKMDDAIRMFEIMPQRDIISWNAMICGLAQNGQSARSLELYDEMTQLHY 423
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+ + P+ TF +L AC H G V G FT+M ++ I+ +EHY ++ L AG L+
Sbjct: 424 ESVTPNSVTFVGVLSACSHAGAVQKGCSYFTQMVNDFHIEPISEHYTCLIDLFARAGWLD 483
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
EA I ++P D + G LL+ C YGN D+A+ A +L N+P + +LSN Y
Sbjct: 484 EAEEIISNVPFKHDAVILGILLNGCRKYGNLDMAKRFAKRLLVNNPDNASAIFLLSNMYI 543
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ W D KLRD + +G K G SW+
Sbjct: 544 ANEEWSDASKLRDAAISSGTHKVMGNSWI 572
>gi|414869047|tpg|DAA47604.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 694
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 173/531 (32%), Positives = 275/531 (51%), Gaps = 5/531 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L + + L + F A+ L+ +YA L AR +FD P R++ WN+II Y +
Sbjct: 112 QLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSR 171
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ +A LF + R PD T+A + + +R +HG + G + +
Sbjct: 172 KPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALN 231
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GKT 202
A +TAYS+ + ++ K+FDG+ DL+ NSM+ +A+ G D++++ F M+R G
Sbjct: 232 AAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQ 291
Query: 203 PDEYTLVGLISGLWEPSLL-SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--NCM-NS 258
PD Y+ IS E G+ IH +K + V + +++MY R NCM
Sbjct: 292 PDMYSFTSAISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMED 351
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
AY+ F+SL D V+W++++TGYS G AL +FR + + + D +++ L + +
Sbjct: 352 AYNCFSSLVFKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSD 411
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G +H V+Q GF + VSS+L+ MYSKCG LG + FE + + + +NS+
Sbjct: 412 LAVLRLGRQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSM 471
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G HG + F ++++ + D TF AL+ A HGGLV++G EI M Y
Sbjct: 472 MFGYAQHGQAQTVTDLFNEMLDLEVPLDHVTFVALITAYSHGGLVDEGSEILNTMETRYK 531
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I + EHY V L G AG L++A I S+P D V LL C I+GN +LA VA
Sbjct: 532 IPMRMEHYACGVDLYGRAGQLDKAKELIESMPFQPDAIVWMTLLGACRIHGNMELASDVA 591
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
LF +PR+ + V+LS+ Y+ G W D ++ + + L K G SW+
Sbjct: 592 RHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQKVMRNRALSKIPGWSWI 642
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 216/458 (47%), Gaps = 12/458 (2%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
+ H +L+ K HA + K+ P +L+ Y+ L +AR +FD+ P WN
Sbjct: 4 RQHHALAAAKS-HATLLKSGA-SSPTPWNQLLTAYSATG-LAAARRVFDEIPHPDAASWN 60
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
S++ A+ A DA L + + L F R+ + + ++
Sbjct: 61 SLLAAHVAAGAHRDAWRLLRAMHARGLAASTFALGSALRSAAAARRPELGAQLQSFSVRC 120
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL + +SAL+ Y+K + +A +VFDG+ ++V N++I+G+ ++++LF
Sbjct: 121 GLADNVFPASALLDVYAKCGRLGDARRVFDGMPVRNIVSWNAIIAGYTDSRKPAEAMELF 180
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M R+G PD T L++ + P S+ + +HG +K + ++ Y++C
Sbjct: 181 LEMQRVGSVPDGTTFAVLLATIAGPRWYSLMRQLHGKIVKYGSALGLVALNAAITAYSQC 240
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF-RKLNMQGKKADPVLIASV 312
+ + + +F+ + DL++W++++ Y+ G +A+ +F R + G + D S
Sbjct: 241 DALADSRKIFDGIESRDLISWNSMLGAYAYHGLDDEAMRFFVRMMRESGIQPDMYSFTSA 300
Query: 313 LAAAAK-SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG---YLGLGIQVFETMS 368
++ ++ + G IH VI+ G E V +A++ MY++ + F ++
Sbjct: 301 ISVCSEHGCDDQQGRSIHSLVIKFGLEGVTPVCNAMIAMYTRFADNCMMEDAYNCFSSLV 360
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++ +++NS++ G HG + A +FFR + + + DE SA L +C ++ GR+
Sbjct: 361 FKDAVSWNSMLTGYSHHGLSSDALKFFRCMRAENIRTDEFGLSAALRSCSDLAVLRLGRQ 420
Query: 429 IFTRMTEEYGIQAK---TEHYIYMVKLLGLAGNLEEAY 463
+ + + + G + + I+M G+ G+ +++
Sbjct: 421 VHS-LVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSF 457
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 7/330 (2%)
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+TAYS L A +VFD + PD NS+++ G + +L M G
Sbjct: 32 LLTAYSATGLA-AARRVFDEIPHPDAASWNSLLAAHVAAGAHRDAWRLLRAMHARGLAAS 90
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+ L + +G + F ++ + +S L+ +YA+C + A VF+
Sbjct: 91 TFALGSALRSAAAARRPELGAQLQSFSVRCGLADNVFPASALLDVYAKCGRLGDARRVFD 150
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ ++V+W+A+I GY+ +A+ F ++ G D A +LA A
Sbjct: 151 GMPVRNIVSWNAIIAGYTDSRKPAEAMELFLEMQRVGSVPDGTTFAVLLATIAGPRWYSL 210
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
+HG ++++G L ++ +A + YS+C L ++F+ + R++I++NS++
Sbjct: 211 MRQLHGKIVKYGSALGLVALNAAITAYSQCDALADSRKIFDGIESRDLISWNSMLGAYAY 270
Query: 385 HGFTYQAFEFF-RDIIEKGLNPDESTFSALLCACC-HGGLVNDGREIFTRMTEEYGIQAK 442
HG +A FF R + E G+ PD +F++ + C HG GR I + + ++G++
Sbjct: 271 HGLDDEAMRFFVRMMRESGIQPDMYSFTSAISVCSEHGCDDQQGRSIHS-LVIKFGLEGV 329
Query: 443 TEHYIYMVKL-LGLAGN--LEEAYSFIWSL 469
T M+ + A N +E+AY+ SL
Sbjct: 330 TPVCNAMIAMYTRFADNCMMEDAYNCFSSL 359
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H+LV ++ + F ++ L+ +Y+ VL AR F++ + S WNS++ YA
Sbjct: 419 RQVHSLVVQSGFASNDFVSSSLIFMYSKCGVLGDARKSFEEADKSSSVPWNSMMFGYAQH 478
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+ LF +L ++ D+ T+ + A + HGG + G
Sbjct: 479 GQAQTVTDLFNEMLDLEVPLDHVTFVALITA-----------YSHGGLVDEG 519
>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
Length = 869
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 183/580 (31%), Positives = 293/580 (50%), Gaps = 33/580 (5%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLR--DPFYATKLVRLYALNNVLPSARIL 60
F L ++L S + L +E HA K L + F L+ +YA ++ A++L
Sbjct: 163 FTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQML 222
Query: 61 F---DKT--PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
F D T P V WN+++ + R +A + +++ ++PD T+A ACS
Sbjct: 223 FGSVDTTDSPGGGVVTWNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACS 282
Query: 116 ENSDLPGLRFVHGGAIV-SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVL 172
+ L R +H + S L +S +SALV Y+ + A +VFD V L L
Sbjct: 283 QLEMLSLGREMHAYVLKDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGL 342
Query: 173 CNSMISGFAHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N+M+ G+A G +++L+LF M G P E T+ G++ + + +HG+
Sbjct: 343 WNAMVCGYAQAGMDEEALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYV 402
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
LK +V + L+ +YAR M +A +F ++ D+V+W+ LITG QG A
Sbjct: 403 LKRGMADNPFVQNALMDLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAF 462
Query: 292 YYFRKLNMQGKKAD-------------PVL-----IASVLAAAAKSANVWPGAVIHGYVI 333
R++ QG+ D PV+ + ++L A A G IHGY +
Sbjct: 463 QLVREMQQQGRFTDATTEDGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAM 522
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+H + + V SALVDMY+KCG L L VF+ + +RN+IT+N +I+ G+HG +A
Sbjct: 523 RHALDSDIAVGSALVDMYAKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIA 582
Query: 394 FF-RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
F R ++ P+E TF A L AC H G+V+ G E+F M +G+Q + + V +
Sbjct: 583 LFDRMVMSNEAKPNEVTFIAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDI 642
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
LG AG L+EAYS I S+ +P + VS + L C ++ N L EI A +LF+ +P + +
Sbjct: 643 LGRAGRLDEAYSIITSM-EPGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEAS 701
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ V+L N Y+ G W+ ++R+ + G+ KE G SW+
Sbjct: 702 HYVLLCNIYSAAGLWEKSSEVRNRMRQRGVSKEPGCSWIE 741
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 119/421 (28%), Positives = 205/421 (48%), Gaps = 17/421 (4%)
Query: 6 HFLVLELSKSH---QSLSRTKELHALVAKASLLR--DPFYATKLVRLYALNNVLPSARIL 60
HF + +KS +SL + +H + LL P A L+ YA L +A L
Sbjct: 59 HFALPPAAKSAAALRSLIAVRSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALAL 118
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSD 119
F+ P R +NS+I A L R+ A +++L +FT + ACS D
Sbjct: 119 FNAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAED 178
Query: 120 LPGLRFVHGGAIVSGL--GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD-----LVL 172
L R H A+ +G G + +AL++ Y++L L+D+A +F V D +V
Sbjct: 179 LRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVT 238
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+M+S G +++++ M+ G PD T + + +LS+G+ +H + L
Sbjct: 239 WNTMVSLLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVL 298
Query: 233 K-SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL--FHPDLVTWSALITGYSQQGDYGK 289
K S + +V+S LV MYA + A VF+ + H L W+A++ GY+Q G +
Sbjct: 299 KDSDLAANSFVASALVDMYASHERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAGMDEE 358
Query: 290 ALYYFRKLNMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
AL F ++ + G IA VL A A+S +HGYV++ G + V +AL+
Sbjct: 359 ALELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALM 418
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
D+Y++ G + +F + R+++++N++I G + G + AF+ R++ ++G D +
Sbjct: 419 DLYARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDAT 478
Query: 409 T 409
T
Sbjct: 479 T 479
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 118/235 (50%), Gaps = 11/235 (4%)
Query: 219 SLLSVGQGIHGFCLKSSF--DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
SL++V + IHG L+ V++ L++ YARC + +A +FN++ D VT+++
Sbjct: 74 SLIAV-RSIHGAALRRDLLHGFTPAVANALLTAYARCGDLTAALALFNAMPSRDAVTFNS 132
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA-NVWPGAVIHGYVIQH 335
LI + AL R + ++G + SVL A + A ++ G H + +++
Sbjct: 133 LIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAHAFALKN 192
Query: 336 GF--ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN-----IITYNSVILGLGLHGFT 388
GF +AL+ MY++ G + +F ++ + ++T+N+++ L G
Sbjct: 193 GFLDGDERFAFNALLSMYARLGLVDDAQMLFGSVDTTDSPGGGVVTWNTMVSLLVQSGRC 252
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+A E D++ +G+ PD TF++ L AC +++ GRE+ + ++ + A +
Sbjct: 253 GEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLAANS 307
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 313 LAAAAKSANVWPGAV----IHGYVIQ----HGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
L AAKSA + IHG ++ HGF + V++AL+ Y++CG L + +F
Sbjct: 62 LPPAAKSAAALRSLIAVRSIHGAALRRDLLHGF--TPAVANALLTAYARCGDLTAALALF 119
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
M R+ +T+NS+I L L A + RD++ +G T ++L AC H L
Sbjct: 120 NAMPSRDAVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSH--LAE 177
Query: 425 D---GRE 428
D GRE
Sbjct: 178 DLRLGRE 184
>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
Length = 1166
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 272/528 (51%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H LV K L + L+ LY+ A ++F +R + WNS++ Y
Sbjct: 418 RGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQD 477
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ D + LL+ ++ T+A ACS L + VH IV+G I
Sbjct: 478 GKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVG 537
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALVT Y KL ++ EA KV + PD V N++I G A +++++ + + G
Sbjct: 538 NALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIP 597
Query: 203 PDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ T+V ++ P LL G IH + + F+S DYV + L++MYA+C +NS+ +
Sbjct: 598 ANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNY 657
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+ L + +TW+A++ + G +AL F ++ G D + LAA A A
Sbjct: 658 IFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAV 717
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +HG VI+ GFE + V++A +DMY KCG + +++ R+ +++N +I
Sbjct: 718 LEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISA 777
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG +A E F ++++ G PD TF +LL AC HGGLV++G + MT E+G+
Sbjct: 778 FARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFP 837
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EH + ++ LLG +G L A FI +P P + +LL+ C I+GN +LA A L
Sbjct: 838 GIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHL 897
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E DP + V+ SN A G+W+DV LR ++ N ++K+ SWV
Sbjct: 898 LELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWV 945
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 207/415 (49%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + L+ S+S ++H V K +L D + T LV Y ++ +A+ LF+
Sbjct: 196 FMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFE 255
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P +V W S++ Y+ + + ++++ + + + + T+A +T +C D
Sbjct: 256 EMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVL 315
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
V G I G +++L++ +S S ++EA VFD +++ D++ N+MIS +AH
Sbjct: 316 GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAH 375
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +SL+ F WM L + TL L+S L G+GIHG +K DS +
Sbjct: 376 HGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCI 435
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+++Y+ A VF ++ DL++W++++ Y Q G L +L GK
Sbjct: 436 CNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGK 495
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V AS LAA + + ++H +I GF ++V +ALV MY K G + +
Sbjct: 496 VMNHVTFASALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKK 555
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
V +TM + + +T+N++I G + +A + ++ I EKG+ + T ++L AC
Sbjct: 556 VLQTMPQPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGAC 610
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 215/435 (49%), Gaps = 5/435 (1%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
A L+ +++ + + A +FD + + WN++I AYA ++ F +
Sbjct: 335 ANSLISMFSSFSSVEEACYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHN 394
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+ ++ T + + CS +L R +HG + GL + + L+T YS+ ++A
Sbjct: 395 ETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAEL 454
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VF +++ DL+ NSM++ + G L++ +L++GK + T ++ P
Sbjct: 455 VFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPEC 514
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L + +H + + F + V + LV+MY + M A V ++ PD VTW+ALI G
Sbjct: 515 LIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPDRVTWNALIGG 574
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFEL 339
+++ + +A+ ++ + +G A+ + + SVL A + ++ G IH +++ GFE
Sbjct: 575 HAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMPIHAHIVLTGFES 634
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
V ++L+ MY+KCG L +F+ + ++ IT+N+++ HG +A + F ++
Sbjct: 635 DDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMR 694
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+N D+ +FS L A + ++ +G+++ + + G ++ + + G G
Sbjct: 695 NVGVNLDQFSFSGGLAATANLAVLEEGQQLHG-LVIKLGFESDLHVTNAAMDMYGKCG-- 751
Query: 460 EEAYSFIWSLPKPVD 474
E + + LP+P++
Sbjct: 752 -EMHDVLKMLPQPIN 765
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/457 (24%), Positives = 224/457 (49%), Gaps = 14/457 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LHA S+ F L+ +Y+ + AR +FD+ R+ W++++ Y
Sbjct: 114 KALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNEASWSTMLSGYVRV 173
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSIT 141
+ +A LF + ++P+ F A + ACS + + F VHG + +G+ D
Sbjct: 174 GLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYV 233
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ALV Y + L+ A K+F+ + D ++V S++ G++ G + L ++ M + G
Sbjct: 234 GTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGV 293
Query: 202 TPDEYTLVGLIS--GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
+ ++ T + S GL E +L G + G ++ F+ V++ L+SM++ + + A
Sbjct: 294 SGNQNTFATVTSSCGLLEDQVL--GYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEA 351
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+VF+ + D+++W+A+I+ Y+ G ++L F + + + ++S+L+ +
Sbjct: 352 CYVFDHMNECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSV 411
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
N+ G IHG V++ G + +V + + L+ +YS+ G VF+ M+ER++I++NS++
Sbjct: 412 DNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMM 471
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G + ++++ G + TF++ L AC N I +++ I
Sbjct: 472 ACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACS-----NPECLIESKIVHALII 526
Query: 440 QAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKP 472
A ++ +V + G G + EA + ++P+P
Sbjct: 527 VAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQP 563
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 136/255 (53%), Gaps = 8/255 (3%)
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+ G E + G+ +H FC+ S + + ++ L++MY++ + A +VF+ + H +
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW-PGAVIHG 330
+WS +++GY + G Y +A+ F ++ G + + ++AS++ A ++S + G +HG
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
+V++ G V V +ALV Y G + ++FE M + N++++ S+++G G +
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGE 280
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND---GREIFTRMTEEYGIQAKTEHYI 447
++ + ++G++ +++TF+ + +C GL+ D G ++ + +YG +
Sbjct: 281 VLNVYQRMRQEGVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHII-QYGFEDSVSVAN 336
Query: 448 YMVKLLGLAGNLEEA 462
++ + ++EEA
Sbjct: 337 SLISMFSSFSSVEEA 351
>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 908
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 170/533 (31%), Positives = 267/533 (50%), Gaps = 1/533 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L KE+H KA + D L+ +YA + AR++FD R V WN++I
Sbjct: 249 ALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMIG 308
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A ++A ++F + + PD+ TY + ++ VH A+ GL
Sbjct: 309 GLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKHAVEVGLVS 368
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D SA V Y + ID+A +FD ++ ++ N+MI G A ++L LF M
Sbjct: 369 DLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMR 428
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G PD T V ++S L + +H + + + V + LV MYA+C
Sbjct: 429 REGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGLVDLR-VGNALVHMYAKCGNTM 487
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+ + ++ TW+ +I+G +Q G +A F ++ +G D S+L+A A
Sbjct: 488 YAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTYVSILSACA 547
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + +H + + G + V +ALV MY+KCG + +VF+ M ER++ ++
Sbjct: 548 STGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERDVYSWTV 607
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I GL HG A + F + +G P+ +F A+L AC H GLV++GR F +T++Y
Sbjct: 608 MIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACSHAGLVDEGRRQFLSLTQDY 667
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI+ EHY MV LLG AG LEEA FI ++P A GALL C YGN ++AE
Sbjct: 668 GIEPTMEHYTCMVDLLGRAGQLEEAKHFILNMPIEPGDAPWGALLGACVTYGNLEMAEFA 727
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A + + P+ + V+LSN YA G W+ + +R + G+RKE G SW+
Sbjct: 728 AKERLKLKPKSASTYVLLSNIYAATGNWEQKLLVRSMMQRRGIRKEPGRSWIE 780
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 149/569 (26%), Positives = 257/569 (45%), Gaps = 43/569 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S SL K++HA + ++ D T LV +Y + A+++FDK +R+
Sbjct: 36 ILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERN 95
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +I A R +A F + R P+++TY I A + L ++ VH
Sbjct: 96 VISWTVMIGGLAHYGRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHS 155
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ +GL D +ALV Y+K ID+A VFDG+ + D+ MI G A G +
Sbjct: 156 HAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQE 215
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI--SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ LF M R G P+ T + ++ S + L + +H K+ F S V + L
Sbjct: 216 AFSLFLQMERGGCLPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAGFISDLRVGNAL 275
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+C ++ A VF+ + D+++W+A+I G +Q G +A F K+ +G D
Sbjct: 276 IHMYAKCGSIDDARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDS 335
Query: 307 VLIASVLAAAAKSANVWPGAV-IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
S+L S W +H + ++ G + V SA V MY +CG + +F+
Sbjct: 336 TTYLSLLNTHV-STGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFD 394
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA--------- 416
++ RN+ T+N++I G+ +A F + +G PD +TF +L A
Sbjct: 395 KLAVRNVTTWNAMIGGVAQQKCGREALSLFLQMRREGFFPDATTFVNILSANVGEEALEW 454
Query: 417 -------CCHGGLVN-------------DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
GLV+ G ++ + + ++ + M+ L
Sbjct: 455 VKEVHSYAIDAGLVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQH 514
Query: 457 GNLEEAYS-FIWSLPKPVDPAVSG--ALLSCCHIYGNSD-LAEIVAHQL---FENDPRKG 509
G EA+S F+ L + + P + ++LS C G + + E+ +H + +D R G
Sbjct: 515 GCGHEAFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVG 574
Query: 510 AYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
L + YA+ G DD ++ DD+++
Sbjct: 575 N---ALVHMYAKCGSVDDARRVFDDMLER 600
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 170/345 (49%), Gaps = 8/345 (2%)
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I YA DA ++ + R +P+ TY I +AC L + +H I SG
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D +ALV Y K ID+A +FD + + +++ MI G AH G ++ F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M R G P+ YT V +++ L + +H + + V + LV MYA+
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ A VF+ + D+ +W+ +I G +Q G +A F ++ G + S+L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 315 AAAKSANVWPGAV-----IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
A+A ++ GA+ +H + + GF + V +AL+ MY+KCG + VF+ M +
Sbjct: 241 ASAITST---GALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVFDGMCD 297
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
R++I++N++I GL +G ++AF F + ++G PD +T+ +LL
Sbjct: 298 RDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLL 342
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 126/241 (52%)
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
MI G+A G+ + +++++ M R G P+E T + ++ P L G+ IH ++S
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
F S V + LV+MY +C ++ A +F+ + ++++W+ +I G + G +A + F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ +G + S+L A A + + +H + + G L + V +ALV MY+K G
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSG 180
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ VF+ M ER+I ++ +I GL HG +AF F + G P+ +T+ ++L
Sbjct: 181 SIDDARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILN 240
Query: 416 A 416
A
Sbjct: 241 A 241
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 84/155 (54%)
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I GY++ G A+ + ++ +G + + + S+L A ++ G IH ++IQ G
Sbjct: 1 MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
F+ V V +ALV+MY KCG + +F+ M ERN+I++ +I GL +G +AF F
Sbjct: 61 FQSDVRVETALVNMYVKCGSIDDAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFHRFL 120
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +G P+ T+ ++L A G + +E+ +
Sbjct: 121 QMQREGFIPNSYTYVSILNANASAGALEWVKEVHS 155
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L KE+H+ A L+ D LV +YA + AR +FD +R
Sbjct: 542 ILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDMLERD 601
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V+ W +I A R DA LF + KP+ +++ + ACS
Sbjct: 602 VYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYSFVAVLSACS 648
>gi|296088715|emb|CBI38165.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 178/580 (30%), Positives = 286/580 (49%), Gaps = 48/580 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S T+ +HA + + F +L+ +Y + L AR LFD+ PQR+ F WNS+I
Sbjct: 29 RSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQRNTFTWNSLI 88
Query: 77 R-------------------------------AYALAHRFNDAKSLFKNLLRTQLKPDNF 105
+A RF ++ F + R + +
Sbjct: 89 SVLTKSGFLDEAARLFGSMPEPDQCSWNSMVSGFAQHDRFEESLEYFVKMHREDFLLNEY 148
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
++ AC+ DL VH S D SAL+ YSK + A +VF G+
Sbjct: 149 SFGSALSACAGLMDLNMGTQVHALVSKSRYSTDVYMGSALIDMYSKCGSVACAEEVFSGM 208
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ +LV NS+I+ + G ++L++F M+ G PDE TL ++S L G
Sbjct: 209 IERNLVTWNSLITCYEQNGPASEALEVFVRMMDSGLEPDEVTLASVVSACASLCALKEGL 268
Query: 226 GIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
IH +K++ D V + LV MYA+C+ +N A VF+ + ++V+ +++++GY++
Sbjct: 269 QIHARVVKTNKFRDDLVLGNALVDMYAKCSKVNEARRVFDRMSIRNVVSETSMVSGYARA 328
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASV-----------LAAAAKSANVWPGAVIHGYVI 333
A + F K+ + + LIA L K ++WP G ++
Sbjct: 329 ASVKAARFMFSKMTQRNVVSWNALIAGYTQNGENEEALRLFRLLKRESIWPTHYTFGNLL 388
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ + V ++L+DMY KCG + G +VFE M ER+ +++N++I+G +G+ +A +
Sbjct: 389 KS----DIFVGNSLIDMYMKCGSIEDGSRVFEKMKERDCVSWNAIIVGYAQNGYGAEALQ 444
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
FR ++ G PD T +LCAC H GLV +GR F M EE+G+ +HY MV LL
Sbjct: 445 IFRKMLVCGEKPDHVTMIGVLCACSHAGLVEEGRHYFFSM-EEHGLIPLKDHYTCMVDLL 503
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G AG L EA + I ++P D V G+LL+ C ++GN ++ + A +L E DP V
Sbjct: 504 GRAGCLNEAKNLIEAMPVNPDAVVWGSLLAACKVHGNIEMGKHAAEKLLEIDPWNSGPYV 563
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
+LSN YAE GRW DV+++R + G+ K+ G SW+ S
Sbjct: 564 LLSNMYAELGRWGDVVRVRKLMRQQGVTKQPGCSWIEVES 603
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
A +L + +S + ++H ++ F + + + + L+D+Y KC L ++F+ M +
Sbjct: 19 AKLLDSCLRSRSARGTRLVHARILMTQFSMEIFIQNRLIDVYGKCDCLDDARKLFDRMPQ 78
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN T+NS+I L GF +A F + E PD+ ++++++ + E
Sbjct: 79 RNTFTWNSLISVLTKSGFLDEAARLFGSMPE----PDQCSWNSMVSGFAQHDRFEESLEY 134
Query: 430 FTRMTEE 436
F +M E
Sbjct: 135 FVKMHRE 141
>gi|414887787|tpg|DAA63801.1| TPA: hypothetical protein ZEAMMB73_367984 [Zea mays]
Length = 711
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/538 (31%), Positives = 274/538 (50%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L + Q + + +A+ + F LV ++A L AR +F+ R +
Sbjct: 174 LGEVEQGRKVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLAS 233
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
W ++I + + +L K + +PD+ +A + AC + +L +HG A+
Sbjct: 234 WTAMIGGAVRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAV 293
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G+G D +ALV Y K + +D A +F + D+ +++I+G + ++ S+
Sbjct: 294 KCGVGDDICVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVS 353
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF M+ G P+ T+ ++ + E LL G+ IH F L++ + ++++S L+ Y
Sbjct: 354 LFTEMVASGIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYC 413
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
R + A VF DLV +++I GY D AL R L +G + D V + S
Sbjct: 414 RQGYIRDAQIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVS 473
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
VL + + + G +H Y I+H V++AL DMY KCG L + ++F M+ERN
Sbjct: 474 VLPLCNQPSRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTERN 533
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+TYN++I LG HG QAF F + G++PD+ TF ALL C HGGL++ G +
Sbjct: 534 TVTYNTLISSLGKHGHADQAFILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYD 593
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M +Y I EHY +V L +G L++A+SFI +L + + V G LLS C +
Sbjct: 594 SMLRDYNIPPDKEHYSCIVDLYSRSGKLDDAWSFIANLQEVPEIDVLGCLLSACRDHHRM 653
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
D+AE+VA ++FE +P Y ++LSN YA G W +V ++R I + L+K G S +
Sbjct: 654 DIAELVAERIFEQNPNDPGYHILLSNVYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 711
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 149/569 (26%), Positives = 252/569 (44%), Gaps = 57/569 (10%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYAL--NNVLPSARILFDKTP 65
L+L L +S +L+ + LHA + R A +LVR YA + L A +FD P
Sbjct: 63 LLLRL-QSAPALTEVRRLHAALLVRGYHRSTVLAAQLVRAYARMRDGGLGHAVRVFDGMP 121
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLR 124
R+ F WN++I+ A RF++A + +++R + D FTY + +AC+ ++ R
Sbjct: 122 TRNSFAWNAVIKGLVDAGRFSEALRWYWDMVRDGSVVADRFTYPPVLKACAALGEVEQGR 181
Query: 125 FVHGGA---IVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
V I G+ + ++ ALV ++K + EA +F+ + DL +MI G
Sbjct: 182 KVQENVETDIARGIAKGNVFVQCALVDMFAKCGCLGEARNMFESMGVRDLASWTAMIGGA 241
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G W + + L M G PD +I + L G +HG+ +K
Sbjct: 242 VRGGDWLEVMTLLKRMKSEGFRPDSMIFATVIPACGKVKELRTGMALHGYAVKCGVGDDI 301
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + LV MY +C ++ A +F S+ H D+ +WS +I G+SQ Y ++ F ++
Sbjct: 302 CVPNALVDMYCKCARLDMAASLFWSIDHKDVFSWSTIIAGHSQNRIYNVSVSLFTEMVAS 361
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G K + IAS+L + ++ + G IH + +++ E S ++SAL+D Y + GY+
Sbjct: 362 GIKPNSTTIASILPSISELRLLRYGKEIHCFSLRNRLEHSEFLASALIDFYCRQGYIRDA 421
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC--- 417
VFE + +++ NS+I G ++ + A R ++++GL PD T ++L C
Sbjct: 422 QIVFEFKPKNDLVVLNSMIRGYVVNKDSESALRLLRALLKEGLRPDHVTVVSVLPLCNQP 481
Query: 418 --------------------------------CHGGLVNDGREIFTRMTEEYGIQAKTEH 445
C G + +IF MTE T
Sbjct: 482 SRLLQGKELHAYAIRHNISSCFSVTNALTDMYCKCGCLEIANKIFLLMTER-----NTVT 536
Query: 446 YIYMVKLLGLAGNLEEAYSFIWSLPK----PVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
Y ++ LG G+ ++A+ ++ L K D ALLSCC G D +
Sbjct: 537 YNTLISSLGKHGHADQAF-ILFDLMKRDGVSPDKVTFVALLSCCSHGGLIDKGLCFYDSM 595
Query: 502 FEN---DPRKGAYKVMLSNTYAEDGRWDD 527
+ P K Y ++ + Y+ G+ DD
Sbjct: 596 LRDYNIPPDKEHYSCIV-DLYSRSGKLDD 623
>gi|297604953|ref|NP_001056393.2| Os05g0574800 [Oryza sativa Japonica Group]
gi|255676596|dbj|BAF18307.2| Os05g0574800 [Oryza sativa Japonica Group]
Length = 857
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 270/528 (51%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+E+HA V + + LV +YA + +AR +FD WN++I +
Sbjct: 217 REVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFEN 276
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
H LF +L +++P+ T +T A S++ + +HG A+ G D
Sbjct: 277 HECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFC 336
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+ L + +A K+F + D + +MISG+ GF DK+L+++ M +
Sbjct: 337 NSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVS 396
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ T+ ++ L VG +H F Y V++ L+ MYA+ ++ A V
Sbjct: 397 PDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEV 456
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V+WS++I G+ +ALYYFR + + K + V + L+A A + +
Sbjct: 457 FKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGAL 515
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH YV++ G V +AL+D+Y KCG F SE++++++N ++ G
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 575
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG A F ++E G +PDE TF ALLCAC G+V G E+F MTE++ I
Sbjct: 576 VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPN 635
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY MV LL G L EAY+ I +P D AV GALL+ C I+ + +L E+ A +
Sbjct: 636 LKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVIL 695
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E +P AY V+L + Y + G+W V ++R + + GL ++ G SWV
Sbjct: 696 ELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVE 743
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 1/370 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K P+R VF WN ++ Y +A L+ +L ++PD +T+ C+ R C D
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
R VH + G G + +ALVT Y+K I A KVFDG++ D + N+MI+G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ L+LF ML P+ T+ + S + + +HGF +K F
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ L+ MY M A +F+ + D ++W+A+I+GY + G KAL + + +
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
D V IAS LAA A + G +H GF V+V++AL++MY+K ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
I+VF+ M+E+++++++S+I G + +++A +FR ++ + P+ TF A L AC
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAA 511
Query: 420 GGLVNDGREI 429
G + G+EI
Sbjct: 512 TGALRSGKEI 521
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 135/270 (50%), Gaps = 4/270 (1%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A+++ + I A +VF + + D+ N M+ G+ GF +++L L+ ML G
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD YT ++ +G+ +H L+ F V + LV+MYA+C + +A V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSA 320
F+ + D ++W+A+I G+ + + L F L M + P L I SV A+ +
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELF--LTMLENEVQPNLMTITSVTVASGMLS 312
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
V +HG+ ++ GF + V ++L+ MY+ G +G ++F M ++ +++ ++I
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
G +GF +A E + + ++PD+ T
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTI 402
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%)
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ + ++SM R + A+ VF + D+ +W+ ++ GY + G +AL + ++ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D VL + G +H +V++ GF V V +ALV MY+KCG +
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+VF+ M+ + I++N++I G + E F ++E + P+ T +++ A
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA 307
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+ +A++ M + G + +VF M ER++ ++N ++ G G GF +A + + ++ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 403 LNPDESTFSALLCACCHGGLVN--DGREI 429
+ PD TF +L C GG+ + GRE+
Sbjct: 193 MRPDVYTFPCVLRTC--GGIPDWRMGREV 219
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L KE+HA V + + + + L+ LY A F ++ V WN ++
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573
Query: 78 AYALAHRFND-AKSLFKNLLRTQLKPDNFTYACITRACSE 116
+ +AH D A SLF ++ PD T+ + ACS
Sbjct: 574 GF-VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
>gi|357440905|ref|XP_003590730.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479778|gb|AES60981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 627
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 172/556 (30%), Positives = 302/556 (54%), Gaps = 13/556 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+LS SL T++ H+ + ++ F T+L+ YA ++++FD ++
Sbjct: 32 LLQLSIDLHSLKLTQQCHSQILTNCFSQNAFLTTRLISAYATFGDSIMSKLVFDSVHTKN 91
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V+LWNS+I Y H+F++A LF+ + R L PD++T A I++ E DL + +HG
Sbjct: 92 VYLWNSLINGYVKNHQFDNAIVLFRQMGRCLL-PDDYTLATISKVSGEIQDLVLGKLIHG 150
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
++ G D + +++++ Y + +A+KVFD + ++ N +ISG A G D
Sbjct: 151 KSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDY 210
Query: 189 SL--QLFDWMLRL---GKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFD----S 238
SL L+++ R+ G D +T+ L+ + G+ +H + +K+ D S
Sbjct: 211 SLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCS 270
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
++ S L+ MY+R N + + VF+ + ++ W+A+I GY Q G AL FR++
Sbjct: 271 DVHMGSSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQ 330
Query: 299 MQGK-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ + + + V + SVL A + G +H + I+ F + + +AL+DMY+KCG L
Sbjct: 331 RKDRIRPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSL 390
Query: 358 GLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+VF+ S ++ IT++S+I GLHG +A + +++++G+ PD T +L A
Sbjct: 391 DYARRVFDNGSYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSA 450
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
CC GLV++G I+ +T EY ++ E +V LLG +G L++A FI +P P+
Sbjct: 451 CCRSGLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPS 510
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
V G+LL+ I+GNS ++ L E +P + + LSNTYA RWD++ ++R +
Sbjct: 511 VWGSLLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMK 570
Query: 537 DNGLRKEAGVSWVSGS 552
+ GLRK G+SW++ S
Sbjct: 571 ERGLRKVPGISWITIS 586
>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
Length = 870
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 270/528 (51%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+E+HA V + + LV +YA + +AR +FD WN++I +
Sbjct: 217 REVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAGHFEN 276
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
H LF +L +++P+ T +T A S++ + +HG A+ G D
Sbjct: 277 HECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFC 336
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+ L + +A K+F + D + +MISG+ GF DK+L+++ M +
Sbjct: 337 NSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVS 396
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ T+ ++ L VG +H F Y V++ L+ MYA+ ++ A V
Sbjct: 397 PDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEV 456
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V+WS++I G+ +ALYYFR + + K + V + L+A A + +
Sbjct: 457 FKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYM-LGHVKPNSVTFIAALSACAATGAL 515
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH YV++ G V +AL+D+Y KCG F SE++++++N ++ G
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 575
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG A F ++E G +PDE TF ALLCAC G+V G E+F MTE++ I
Sbjct: 576 VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPN 635
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY MV LL G L EAY+ I +P D AV GALL+ C I+ + +L E+ A +
Sbjct: 636 LKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVIL 695
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E +P AY V+L + Y + G+W V ++R + + GL ++ G SWV
Sbjct: 696 ELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVE 743
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 1/370 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K P+R VF WN ++ Y +A L+ +L ++PD +T+ C+ R C D
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
R VH + G G + +ALVT Y+K I A KVFDG++ D + N+MI+G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAVTDCISWNAMIAG 272
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ L+LF ML P+ T+ + S + + +HGF +K F
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ L+ MY M A +F+ + D ++W+A+I+GY + G KAL + + +
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
D V IAS LAA A + G +H GF V+V++AL++MY+K ++
Sbjct: 393 HNVSPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
I+VF+ M+E+++++++S+I G + +++A +FR ++ + P+ TF A L AC
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFEALYYFRYMLGH-VKPNSVTFIAALSACAA 511
Query: 420 GGLVNDGREI 429
G + G+EI
Sbjct: 512 TGALRSGKEI 521
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 135/270 (50%), Gaps = 4/270 (1%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A+++ + I A +VF + + D+ N M+ G+ GF +++L L+ ML G
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD YT ++ +G+ +H L+ F V + LV+MYA+C + +A V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSA 320
F+ + D ++W+A+I G+ + + L F L M + P L I SV A+ +
Sbjct: 255 FDGMAVTDCISWNAMIAGHFENHECEAGLELF--LTMLENEVQPNLMTITSVTVASGMLS 312
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
V +HG+ ++ GF + V ++L+ MY+ G +G ++F M ++ +++ ++I
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
G +GF +A E + + ++PD+ T
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVSPDDVTI 402
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%)
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ + ++SM R + A+ VF + D+ +W+ ++ GY + G +AL + ++ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D VL + G +H +V++ GF V V +ALV MY+KCG +
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+VF+ M+ + I++N++I G + E F ++E + P+ T +++ A
Sbjct: 253 KVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA 307
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+ +A++ M + G + +VF M ER++ ++N ++ G G GF +A + + ++ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 403 LNPDESTFSALLCACCHGGLVN--DGREI 429
+ PD TF +L C GG+ + GRE+
Sbjct: 193 MRPDVYTFPCVLRTC--GGIPDWRMGREV 219
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L KE+HA V + + + + L+ LY A F ++ V WN ++
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573
Query: 78 AYALAHRFND-AKSLFKNLLRTQLKPDNFTYACITRACSE 116
+ +AH D A SLF ++ PD T+ + ACS
Sbjct: 574 GF-VAHGLGDIALSLFNQMVEMGEHPDEVTFVALLCACSR 612
>gi|357472867|ref|XP_003606718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507773|gb|AES88915.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 186/560 (33%), Positives = 275/560 (49%), Gaps = 43/560 (7%)
Query: 2 FFNLHFL---------VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNN 52
FN HFL ++E +SL + K+LHAL+ +R A+ L+ LY
Sbjct: 19 IFNHHFLRSEPESYAKLIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCG 78
Query: 53 VLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL--LRTQLKPDNFTYACI 110
L AR LFDK PQ ++ W ++I A + A +F + L Q F +
Sbjct: 79 QLSIARKLFDKIPQTNIHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSV 138
Query: 111 TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDL 170
+AC D VH + D+ SSAL+ YSK + +A KVFDG+ DL
Sbjct: 139 LKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVKDL 198
Query: 171 VLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
V N+++SG+A G +++L L + M +G P+ T LISG +
Sbjct: 199 VAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGFAQKC----------- 247
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
+ VS + MN PD+V+W+++++G+ Q +A
Sbjct: 248 -------DREMVSEIF-------RLMNE------DRVEPDVVSWTSVLSGFVQNFRNEEA 287
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
F+K+ + G I+++L A A A V G IHGY + G E + V SALVDM
Sbjct: 288 FDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDM 347
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP-DEST 409
Y+KCG++ +F M E+N +T NS+I G HG +A E F + +G+ D T
Sbjct: 348 YAKCGFISEARTLFYKMPEKNTVTMNSMIFGYANHGCCEEAIELFNQMEMEGVPKLDHLT 407
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
F+A L AC H G + G+ +F M E+Y I+ + EHY MV L G AG LEEAY I S+
Sbjct: 408 FTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYACMVDLFGRAGKLEEAYGIIKSM 467
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P D V GALL+ C +G+ +LAE+ A L E +P +++LS+ YA+ G W V
Sbjct: 468 PVKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPESAGNRLLLSSLYADAGTWGKVE 527
Query: 530 KLRDDIVDNGLRKEAGVSWV 549
+++ I LRK G+SW+
Sbjct: 528 RIKRRIKKGKLRKLQGLSWI 547
>gi|224122892|ref|XP_002318942.1| predicted protein [Populus trichocarpa]
gi|222857318|gb|EEE94865.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 168/535 (31%), Positives = 279/535 (52%), Gaps = 4/535 (0%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+++H L K + + D F + LV Y + AR LFD+ P+R++ W ++I YA
Sbjct: 131 ARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTMISGYAS 190
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRA--CSENSDLPGLRFVHGGAIVSGLGRDS 139
+A +F + + + F + + A C E D + VH + +G+
Sbjct: 191 KQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALVCPEFVD--SGKQVHCVVVKNGVLEFV 248
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ALVT Y+K ++ ++ +F+ SD + + +++I+G++ G K+L+LF M
Sbjct: 249 SVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSALITGYSQAGDSHKALKLFSKMHYA 308
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P E+TLVG++ + + + G+ HG+ LKS +++ Y ++ LV MYA+ A
Sbjct: 309 GFVPSEFTLVGVLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDA 368
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
F+ L PDLV W+++I GY Q G +AL + ++ M+ + + +ASVL A +
Sbjct: 369 RKGFDFLLEPDLVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNL 428
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
A + G IH I++G + + SAL MY+KCG L G+ +F M +R+I+++N++I
Sbjct: 429 AALEQGKQIHARTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMI 488
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
GL +G +A E F ++ +G PD TF +L AC H G+V G F M +E+ +
Sbjct: 489 SGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCL 548
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ EHY MV +L AG L EA FI S + LL C + N +L
Sbjct: 549 VPRVEHYACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGE 608
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
+L E R+ + V+LS+ Y GR DV+++R + G+RKE G SW+ S+
Sbjct: 609 KLMELGSRESSAYVLLSSIYTAMGRLADVVRVRRMMKVRGVRKETGCSWIELKSH 663
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 163/336 (48%), Gaps = 23/336 (6%)
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS--LQLFDWMLRLGKT 202
L+ Y+K + A VF+ + ++V N +I G +H G + L+LF M+
Sbjct: 49 LIKFYAKCGHLHGAKLVFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNIL 108
Query: 203 PDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD +T G++ + L++G + +H +K++ +V S LV+ Y + C+
Sbjct: 109 PDAHTF----PGVFTAAALNLGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVF 164
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ + +LV+W+ +I+GY+ + +AL F + + + + SVL+A
Sbjct: 165 EARKLFDRMPERNLVSWTTMISGYASKQMAKEALGVFGLMRLVEGNLNEFVFTSVLSALV 224
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
V G +H V+++G V V +ALV MY+KCG L + +FE S++N IT+++
Sbjct: 225 CPEFVDSGKQVHCVVVKNGVLEFVSVLNALVTMYAKCGNLNYSLMLFEMCSDKNAITWSA 284
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G G +++A + F + G P E T +L AC + +G++ T Y
Sbjct: 285 LITGYSQAGDSHKALKLFSKMHYAGFVPSEFTLVGVLKACSDVAAIEEGKQ-----THGY 339
Query: 438 GIQAKTEHYIY-------MVKLLGLAGNLEEAYSFI 466
+++ E IY M G G+ + + F+
Sbjct: 340 LLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFL 375
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 141/322 (43%), Gaps = 12/322 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ ++ K+ H + K+ + AT LV +YA AR FD +
Sbjct: 320 VLKACSDVAAIEEGKQTHGYLLKSGYETQIYTATALVDMYAKFGFTGDARKGFDFLLEPD 379
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ LW SII Y + +A S++ + ++ P+ T A + +ACS + L + +H
Sbjct: 380 LVLWTSIIAGYVQNGKNEEALSMYGRMQMRKILPNELTMASVLKACSNLAALEQGKQIHA 439
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I GLG + SAL T Y+K ++E + +F + D+V N+MISG + G +
Sbjct: 440 RTIKYGLGPELSIRSALSTMYAKCGSLEEGVLIFRRMLQRDIVSWNAMISGLSQNGHGRE 499
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVS 243
+L+LF+ M G PD T V ++S ++ G FCL + Y
Sbjct: 500 ALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMFDEFCLVPRVEHY---- 555
Query: 244 SVLVSMYARCNCMNSAYHVFNS-LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ +V + +R +N A S + + W L+ +Y Y KL G
Sbjct: 556 ACMVDVLSRAGKLNEAKEFIESAIIDHGMCLWRILLPACRNHCNYELGAYAGEKLMELGS 615
Query: 303 KADP--VLIASVLAAAAKSANV 322
+ VL++S+ A + A+V
Sbjct: 616 RESSAYVLLSSIYTAMGRLADV 637
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 109/233 (46%), Gaps = 8/233 (3%)
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-DSYDYVSSVLVSMYARCNCMNSAYH 261
P + L+ + L GQ +H +K + S +Y+++ L+ YA+C ++ A
Sbjct: 5 PQNRSFYNLLIQYADQKSLKKGQILHAHIIKIPYLSSCNYLANNLIKFYAKCGHLHGAKL 64
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGK--ALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF +L H ++V+++ LI G S G G L FR++ D V AAA +
Sbjct: 65 VFENLKHKNVVSYNCLIHGLSHNGSKGSNFVLELFRRMIANNILPDAHTFPGVFTAAALN 124
Query: 320 ANV-WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ +H I+ V V S+LV+ Y K G + ++F+ M ERN++++ ++
Sbjct: 125 LGCNFDARQVHVLGIKTASIDDVFVGSSLVNFYCKVGCVFEARKLFDRMPERNLVSWTTM 184
Query: 379 ILGLGLHGFTYQAFEFF--RDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
I G +A F ++E LN E F+++L A V+ G+++
Sbjct: 185 ISGYASKQMAKEALGVFGLMRLVEGNLN--EFVFTSVLSALVCPEFVDSGKQV 235
>gi|242046440|ref|XP_002461091.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
gi|241924468|gb|EER97612.1| hypothetical protein SORBIDRAFT_02g040530 [Sorghum bicolor]
Length = 695
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/534 (31%), Positives = 270/534 (50%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
Q + + A +A+ + F LV ++A L AR +F+ R + W ++
Sbjct: 162 EQGRKVQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAM 221
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I + + +L K + +PD+ A + AC + +L +HG + G+
Sbjct: 222 IGGTVHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGV 281
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
G D+ +ALV Y K + +D A +F + D++ +++I+G + + S+ LF
Sbjct: 282 GVDTCVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSE 341
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G P+ TL ++ L E L G+ IH F L++ + ++++S L+ Y+R
Sbjct: 342 MVASGVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGS 401
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A VF DLV +++I GY D AL R L +G + D V + SVL
Sbjct: 402 IKEAEIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPL 461
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ + + G +H Y I+H VS+AL DMY KCG L L ++F M+ERN +TY
Sbjct: 462 CNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERNTVTY 521
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N++I LG HG QAF F + G++PD+ TF ALL C H GL++ G + M
Sbjct: 522 NTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSMLR 581
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+Y I EHY +V L +G L+ A+SFI +L + + V G LLS C + D+AE
Sbjct: 582 DYNISPDKEHYSCIVDLYSRSGRLDAAWSFIANLQEVPEIDVLGCLLSACREHNRMDIAE 641
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+VA ++FE +P Y ++LSN YA G W +V ++R I + L+K G S +
Sbjct: 642 LVAERIFEQNPNDPGYHILLSNIYASAGMWSEVTRIRTMIEERSLKKRTGNSLI 695
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 152/568 (26%), Positives = 250/568 (44%), Gaps = 57/568 (10%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYAL--NNVLPSARILFDKTP 65
L+L L +S +L+ + LHA + A +LVR YA + L A +FD
Sbjct: 47 LLLRL-QSGPALTEVRRLHAALLVRGYRTSTVLAAQLVRAYARLRDGGLGHAVRVFDGML 105
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLR 124
R+ F WN++I+ A RF++A + +++ + D FTY + +AC+ + R
Sbjct: 106 TRNSFAWNAVIKGLVDAGRFSEALQWYWDMVGDGSVVADRFTYPPVLKACAALGVVEQGR 165
Query: 125 FVHGGA---IVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
V I G+ + ++ ALV ++K + EA VF+ + DL +MI G
Sbjct: 166 KVQENVEADIARGIAKCNVFVQCALVDMFAKCGCLGEARNVFESMEVRDLAAWTAMIGGT 225
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
H G W + + L M G PD L +I + L G +HG +K
Sbjct: 226 VHGGDWLEVMTLLKRMKSEGFRPDSMILATVIPACGKVKELRTGTALHGCVVKCGVGVDT 285
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + LV MY +C ++ A +F S+ H D+++WS +I G+SQ Y ++ F ++
Sbjct: 286 CVLNALVDMYCKCARLDFAASLFWSIDHKDVISWSTIIAGHSQNRRYHVSVSLFSEMVAS 345
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G K + +AS+L + ++ G IH + +++G E S ++SAL+D YS+ G +
Sbjct: 346 GVKPNSTTLASILPSLSELRLFRYGKEIHCFSLRNGLEHSEFLASALIDFYSRQGSIKEA 405
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC--- 417
VFE + +++ NS+I G ++ + A R ++++GL PD T ++L C
Sbjct: 406 EIVFEFTPKNDLVVSNSMIGGYVVNEDSESALRLLRALLKEGLRPDRVTVVSVLPLCNQH 465
Query: 418 --------------------------------CHGGLVNDGREIFTRMTEEYGIQAKTEH 445
C G + EIF MTE T
Sbjct: 466 SRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTER-----NTVT 520
Query: 446 YIYMVKLLGLAGNLEEAYSFIWSLPK----PVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
Y ++ LG G+ E+A+ F++ L K D ALLSCC G D +
Sbjct: 521 YNTLISSLGKHGHAEQAF-FLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYDSM 579
Query: 502 FEN---DPRKGAYKVMLSNTYAEDGRWD 526
+ P K Y ++ + Y+ GR D
Sbjct: 580 LRDYNISPDKEHYSCIV-DLYSRSGRLD 606
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 66/169 (39%), Gaps = 4/169 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L H L + KELHA + ++ + L +Y L A +F +R+
Sbjct: 458 VLPLCNQHSRLLQGKELHAYAIRHNISSCCSVSNALTDMYCKCGCLELAFEIFLLMTERN 517
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
+N++I + A LF + R + PD T+ + CS + GL F
Sbjct: 518 TVTYNTLISSLGKHGHAEQAFFLFDLMKRDGVSPDKVTFVALLSCCSHEGLIDKGLCFYD 577
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA---IKVFDGVSDPDLVLC 173
+ D S +V YS+ +D A I V + D++ C
Sbjct: 578 SMLRDYNISPDKEHYSCIVDLYSRSGRLDAAWSFIANLQEVPEIDVLGC 626
>gi|224096616|ref|XP_002310672.1| predicted protein [Populus trichocarpa]
gi|222853575|gb|EEE91122.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 282 bits (721), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 283/518 (54%), Gaps = 17/518 (3%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
+TKL+ Y+ SAR +FD+ P+R+V W++ I Y+ + DA +F ++LR
Sbjct: 35 STKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGYSQNGCYQDALLVFLDMLRAGF 94
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS------ITSSALVTAYSKLSL 154
K + FTY + RAC+ GLR + G + G S I SAL+ +SK
Sbjct: 95 KANQFTYGSVLRACT------GLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGK 148
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI-- 212
+++A +F + + D+V N++I +A GF S ++F M++ G +PD +T ++
Sbjct: 149 MEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKA 208
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
SG+ ++ V Q IH ++ + S+ +S L+ YA+C + SA+ ++ S+ D++
Sbjct: 209 SGM-ASDVIRVCQ-IHQLIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMI 266
Query: 273 TWSALITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
+ +AL+TGY++ +Y KAL F+++ K D V++ S+ A +++ G IH
Sbjct: 267 SCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHAL 326
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
++ V + +AL+DMY+K G + + F M E+N+I++ S+I G G HG ++A
Sbjct: 327 ALKCKPTYDVAMGNALIDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEA 386
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
F+ + +GL P++ TF +LL AC H GL +G E F M +Y I + EH+ MV
Sbjct: 387 IALFKKMEYEGLKPNDITFLSLLFACNHCGLTGEGWECFNNMISKYNILPRAEHFSCMVD 446
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
L G LEEAY+ I + + ++ GA+L C+IYGN LAE A LF+ DP
Sbjct: 447 LFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMPLAEEAAIHLFKMDPENSVN 506
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+L++ YA G WD+ K+R + + L+K G S++
Sbjct: 507 YVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSFI 544
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 157/310 (50%), Gaps = 2/310 (0%)
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
PG +H + +G + S+ L+ YSKL A KVFD + + +V ++ ISG+
Sbjct: 15 PG-HLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPERTVVSWSAQISGY 73
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
+ G + +L +F MLR G +++T ++ L G I G KS F S
Sbjct: 74 SQNGCYQDALLVFLDMLRAGFKANQFTYGSVLRACTGLRCLQRGMQIQGCLEKSRFASNL 133
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V S L+ ++++C M A ++F + D+V+W+A+I Y+ QG G + FR + +
Sbjct: 134 IVQSALLDLHSKCGKMEDASYLFGMMEERDVVSWNAIIGAYAVQGFSGDSFRMFRSMMQE 193
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G D SVL A+ +++V IH +IQ G+ + +S +L+D Y+KC L
Sbjct: 194 GMSPDLFTFGSVLKASGMASDVIRVCQIHQLIIQLGYGSHISLSGSLIDAYAKCESLASA 253
Query: 361 IQVFETMSERNIITYNSVILGLGL-HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++++M +++I+ +++ G ++ +A + F++I + + D+ ++ C +
Sbjct: 254 HCLYKSMPMKDMISCTALMTGYARDSNYSSKALDLFKEIQQMHMKIDDVILCSMFNICAN 313
Query: 420 GGLVNDGREI 429
++ GR+I
Sbjct: 314 ISSLSVGRQI 323
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/489 (23%), Positives = 214/489 (43%), Gaps = 69/489 (14%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + L R ++ + K+ + + L+ L++ + A LF +R
Sbjct: 104 VLRACTGLRCLQRGMQIQGCLEKSRFASNLIVQSALLDLHSKCGKMEDASYLFGMMEERD 163
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN+II AYA+ D+ +F+++++ + PD FT+ + +A SD+ + +H
Sbjct: 164 VVSWNAIIGAYAVQGFSGDSFRMFRSMMQEGMSPDLFTFGSVLKASGMASDVIRVCQIHQ 223
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH-CGFWD 187
I G G S +L+ AY+K + A ++ + D++ C ++++G+A +
Sbjct: 224 LIIQLGYGSHISLSGSLIDAYAKCESLASAHCLYKSMPMKDMISCTALMTGYARDSNYSS 283
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVL 246
K+L LF + ++ D+ L + + S LSVG+ IH LK +YD + + L
Sbjct: 284 KALDLFKEIQQMHMKIDDVILCSMFNICANISSLSVGRQIHALALKCK-PTYDVAMGNAL 342
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+ + A FN + ++++W++LITGY G +A+ F+K+ +G K +
Sbjct: 343 IDMYAKSGEIKDANRAFNEMEEKNVISWTSLITGYGSHGHGHEAIALFKKMEYEGLKPND 402
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ S+L A + CG G G + F
Sbjct: 403 ITFLSLLFAC-----------------------------------NHCGLTGEGWECFNN 427
Query: 367 M-SERNII---TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG- 421
M S+ NI+ + S ++ L G + E + I + + P+ S + A+L AC G
Sbjct: 428 MISKYNILPRAEHFSCMVDLFARGGLLE--EAYNLINKMNIKPNASLWGAILGACYIYGN 485
Query: 422 --LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG---------------NLEEA-- 462
L + +M E + +Y+ + + AG NL++A
Sbjct: 486 MPLAEEAAIHLFKMDPENSV-----NYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPG 540
Query: 463 YSFIWSLPK 471
YSFI S+P+
Sbjct: 541 YSFIPSIPQ 549
>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
Length = 869
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 275/528 (52%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+E+HA V + + L+ +YA + +AR +FD WN++I +
Sbjct: 215 REVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAGHFEN 274
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
N LF +L+ +++P+ T +T A SD+ + +HG A+ G D
Sbjct: 275 GECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFATDVAFC 334
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+ L ++ +A VF + D + +MISG+ GF DK+L+++ M +
Sbjct: 335 NSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALMEVNNVS 394
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ T+ ++ L VG +H F SY V++ L+ MYA+ ++ A V
Sbjct: 395 PDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEV 454
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V+WS++I G+ +ALYYFR + + K + V + LAA A + +
Sbjct: 455 FKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGAL 513
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +V++ G + +AL+D+Y KCG G F ++++++N +I G
Sbjct: 514 RSGKEIHAHVLRCGIAYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGF 573
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG A FF +++ G PDE TF ALLCAC GG+V++G E+F MT++Y I
Sbjct: 574 VAHGNGETALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTDKYSIVPN 633
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY MV LL G L EAY+FI +P D AV GALL+ C I+ + +L E+ A +
Sbjct: 634 LKHYACMVDLLSRVGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVL 693
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E +P Y V+L + YA+ G WD + ++R + + GL ++G SWV
Sbjct: 694 ELEPNDAGYHVLLCDLYADAGIWDKLARVRKTMREKGLDHDSGCSWVE 741
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 195/372 (52%), Gaps = 5/372 (1%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K P+R VF WN ++ Y A +A L+ ++ ++PD +T+ C+ R+C D
Sbjct: 151 VFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 210
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
R VH + G + +AL+T Y+K + A KVFD ++ D + N+MI+G
Sbjct: 211 WRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIAG 270
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTL--VGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G + L+LF ML+ P+ T+ V + SGL S ++ + +HG +K F
Sbjct: 271 HFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLL--SDITFAKEMHGLAVKRGFA 328
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ + L+ MYA M A VF+ + D ++W+A+I+GY + G KAL + +
Sbjct: 329 TDVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALM 388
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ D + IAS LAA A ++ G +H GF V+V++AL++MY+K +
Sbjct: 389 EVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRI 448
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
I+VF+ M E+++++++S+I G + ++A +FR ++ + P+ TF A L AC
Sbjct: 449 DKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAAC 507
Query: 418 CHGGLVNDGREI 429
G + G+EI
Sbjct: 508 AATGALRSGKEI 519
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 146/311 (46%), Gaps = 4/311 (1%)
Query: 102 PDNFTYACITRACSENSDL-PGLR-FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
PD Y + R C + PGLR H + G +A+++ + A
Sbjct: 92 PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLR--LGNAMLSMLVRFGETWHAW 149
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
+VF + + D+ N M+ G+ G +++L L+ M+ G PD YT ++
Sbjct: 150 RVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 209
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
+G+ +H L+ F V + L++MYA+C + +A VF+S+ D ++W+A+I
Sbjct: 210 DWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAARKVFDSMAVMDCISWNAMIA 269
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G+ + G+ L F + + + + I SV A+ +++ +HG ++ GF
Sbjct: 270 GHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLLSDITFAKEMHGLAVKRGFAT 329
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
V ++L+ MY+ G +G VF M R+ +++ ++I G +GF +A E + +
Sbjct: 330 DVAFCNSLIQMYASLGMMGQARTVFSRMDTRDAMSWTAMISGYEKNGFPDKALEVYALME 389
Query: 400 EKGLNPDESTF 410
++PD+ T
Sbjct: 390 VNNVSPDDITI 400
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 11/269 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL +LH L + L+ +YA + + A +F P++ V W+S+I
Sbjct: 412 SLDVGVKLHELAESKGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIA 471
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ HR +A F+++L +KP++ T+ AC+ L + +H + G+
Sbjct: 472 GFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAY 530
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ +AL+ Y K A F D+V N MI+GF G + +L F+ M+
Sbjct: 531 EGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMV 590
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYAR 252
++G+ PDE T V L+ ++S G + S D Y V ++ +V + +R
Sbjct: 591 KIGECPDEVTFVALLCACSRGGMVSEGWEL----FHSMTDKYSIVPNLKHYACMVDLLSR 646
Query: 253 CNCMNSAYHVFNSL-FHPDLVTWSALITG 280
+ AY+ N + PD W AL+ G
Sbjct: 647 VGQLTEAYNFINEMPITPDAAVWGALLNG 675
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 108/232 (46%), Gaps = 16/232 (6%)
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ + ++SM R A+ VF + D+ +W+ ++ GY + G +AL + ++ G
Sbjct: 131 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAG 190
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D VL + + G +H +V++ GF V V +AL+ MY+KCG +
Sbjct: 191 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFAEEVDVLNALMTMYAKCGDVVAAR 250
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF++M+ + I++N++I G +G E F +++ + P+ T +++ A G
Sbjct: 251 KVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVA---SG 307
Query: 422 LVNDGREIFTRMTEEYGIQAK---------TEHYIYMVKLLGLAGNLEEAYS 464
L++D T E +G+ K I M LG+ G +S
Sbjct: 308 LLSD----ITFAKEMHGLAVKRGFATDVAFCNSLIQMYASLGMMGQARTVFS 355
>gi|297834340|ref|XP_002885052.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330892|gb|EFH61311.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 652
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 162/533 (30%), Positives = 282/533 (52%), Gaps = 8/533 (1%)
Query: 23 KELHALVAKASLLRD-PFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+++H + + L D P T LV +YA ++ A ++F + +R VF +N++I + +
Sbjct: 79 QQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVV 137
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
DA +++ + + PD +T+ + + S+ ++ ++ VH A G D
Sbjct: 138 NGSPLDAMDMYREMRAKGILPDKYTFPSLLKG-SDAMEVSDVKKVHALAFKLGFVSDCYV 196
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
SALVT+YSK +++A KVFD + D D VL N++++G++H ++ +L +F M G
Sbjct: 197 GSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSHIFRFEDALIVFSKMREEG 256
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+T+ ++S L G+ IHG +K FDS VS+ L+ +Y + + A
Sbjct: 257 VAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEAN 316
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F ++ DL TW++++ + GD+ L F + G + D V + +VL + A
Sbjct: 317 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLA 376
Query: 321 NVWPGAVIHGYVIQHGF----ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
++ G IHGY+I G + + ++L+DMY KCG L VF++M ++ ++N
Sbjct: 377 SLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 436
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+I G G+ A + F + G+ PDE TF LL AC H G VN+GR +M
Sbjct: 437 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETL 496
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y I ++HY ++ +LG A LEEAY S+P +P V ++LS C ++GN DLA +
Sbjct: 497 YNILPTSDHYACVIDMLGRADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVV 556
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L+E +P V++SN Y E ++++V+ +RD + + ++K G SW+
Sbjct: 557 AGKRLYELEPEHCGVYVLMSNVYVEAKKYEEVLDVRDTMKEQNVKKTPGCSWI 609
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 148/312 (47%), Gaps = 5/312 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR-SVFLWNSIIR 77
+S K++HAL K + D + + LV Y+ + A+ +FD+ P R LWN+++
Sbjct: 175 VSDVKKVHALAFKLGFVSDCYVGSALVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 234
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y+ RF DA +F + + T + + + + DL R +HG A+ G
Sbjct: 235 GYSHIFRFEDALIVFSKMREEGVAMSRHTITSVLSSFTVSGDLDNGRSIHGLAVKMGFDS 294
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ S+AL+ Y K ++EA +F+ + + DL NS++ +CG D +L LF+ ML
Sbjct: 295 GIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFETML 354
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF----DSYDYVSSVLVSMYARC 253
G PD TL ++ + L G+ IHG+ + S S ++ + L+ MY +C
Sbjct: 355 CSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNRKSSNGFIHNSLMDMYVKC 414
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ A VF+S+ D +W+ +I GY Q AL F + G K D + +L
Sbjct: 415 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 474
Query: 314 AAAAKSANVWPG 325
A + S V G
Sbjct: 475 QACSHSGFVNEG 486
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 124/286 (43%), Gaps = 8/286 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + +H L K + L+ LY + L A +F+ +R +F WNS++
Sbjct: 277 LDNGRSIHGLAVKMGFDSGIVVSNALIDLYGKSKWLEEANSIFEAMDERDLFTWNSVLCV 336
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--- 135
+ + +LF+ +L + ++PD T + C + L R +HG I SGL
Sbjct: 337 HDYCGDHDGTLALFETMLCSGIRPDIVTLTTVLPTCGRLASLKQGREIHGYMIASGLLNR 396
Query: 136 -GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ ++L+ Y K + +A VFD + D N MI+G+ + +L +F
Sbjct: 397 KSSNGFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFS 456
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI--HGFCLKSSFDSYDYVSSVLVSMYAR 252
M R G PDE T VGL+ ++ G+ L + + D+ + V + M R
Sbjct: 457 CMCRAGVKPDEITFVGLLQACSHSGFVNEGRNFLAQMETLYNILPTSDHYACV-IDMLGR 515
Query: 253 CNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ + AY + S+ + V W ++++ G+ A+ ++L
Sbjct: 516 ADKLEEAYDLAISMPICDNPVVWRSILSSCRLHGNKDLAVVAGKRL 561
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+ L A+ + G IHG++++ GF + S ++LV+MY+KCG + + VF SE
Sbjct: 64 ATLQRCAQRKDSVSGQQIHGFMVRKGFLDDSPRAVTSLVNMYAKCGLMRRAVLVFGG-SE 122
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
R++ YN++I G ++G A + +R++ KG+ PD+ TF +LL
Sbjct: 123 RDVFGYNALISGFVVNGSPLDAMDMYREMRAKGILPDKYTFPSLL 167
>gi|255558188|ref|XP_002520121.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540613|gb|EEF42176.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 589
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 172/526 (32%), Positives = 280/526 (53%), Gaps = 4/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA K +L D + ++ LY+ + AR +FD+ R++ W++II Y +
Sbjct: 25 LHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQTGQ 84
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +LF + ++ P+ + +A + AC+ + L VH ++ G S S+A
Sbjct: 85 PLLALNLFSQM---RIVPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFVSNA 141
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y K L +A+ V + +S+P+ V N++I+GF +K ++ F M + G PD
Sbjct: 142 LISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPD 201
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+T GL+ G +H +K + + ++ +V+++MY++ N + A VF
Sbjct: 202 RFTFSGLLGICTSYDDFWRGMQLHCQMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFG 261
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKADPVLIASVLAAAAKSANVW 323
+ DL++W+ L+T D+ +AL FR L++ K D A VLAA A A++
Sbjct: 262 LIKEKDLISWNTLVTACCFCKDHERALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIR 321
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IHG++I+ V VS+ALV+MY+KCG + VF S+RN++++N++I G
Sbjct: 322 HGKQIHGHLIRTRQYQDVGVSNALVNMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFG 381
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG +A E F + G++PD TF LL AC H GLV +G+ F M E YGI
Sbjct: 382 NHGLGARALEHFEKMKTVGIHPDSVTFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNI 441
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EH+ ++ LLG AG L+EA ++ LP DP + G+LLS C ++G+ + E +A QL +
Sbjct: 442 EHFSCLIDLLGRAGRLQEAEEYMEKLPFGHDPIILGSLLSACRLHGDMVIGEHLATQLLK 501
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
P + V+LSN YA D W V + + +GL+KE G S +
Sbjct: 502 LQPVTTSPYVLLSNLYASDEMWGGVAEAWKMLKYSGLKKEPGHSLI 547
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 176/375 (46%), Gaps = 6/375 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ S +LS+ ++HA K + F + L+ +Y + A ++ + + +
Sbjct: 107 VISACASLTALSQGLQVHAQSLKLGCVSVSFVSNALISMYMKCGLCTDALLVHNVMSEPN 166
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I + + FK + + PD FT++ + C+ D +H
Sbjct: 167 AVSYNALIAGFVENQQPEKGIEAFKVMRQKGFAPDRFTFSGLLGICTSYDDFWRGMQLHC 226
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I L + + ++T YSK +LI+EA KVF + + DL+ N++++ C ++
Sbjct: 227 QMIKLNLEDSAFIGNVIITMYSKFNLIEEAEKVFGLIKEKDLISWNTLVTACCFCKDHER 286
Query: 189 SLQLFDWMLRLG-KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+L++F ML + PD++T G+++ + + G+ IHG +++ VS+ LV
Sbjct: 287 ALRVFRDMLDVCFVKPDDFTFAGVLAACAGLASIRHGKQIHGHLIRTRQYQDVGVSNALV 346
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+C + ++Y VF +LV+W+ +I + G +AL +F K+ G D V
Sbjct: 347 NMYAKCGSIKNSYDVFRRTSDRNLVSWNTIIAAFGNHGLGARALEHFEKMKTVGIHPDSV 406
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+L A + V G V + + +G ++ S L+D+ + G L Q E
Sbjct: 407 TFVGLLTACNHAGLVEEGQVYFNSMEEAYGIFPNIEHFSCLIDLLGRAGRL----QEAEE 462
Query: 367 MSERNIITYNSVILG 381
E+ ++ +ILG
Sbjct: 463 YMEKLPFGHDPIILG 477
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 102/194 (52%), Gaps = 3/194 (1%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G +H LK+ S VS+ ++++Y++C + A +F+ + +LV+WSA+I+GY Q
Sbjct: 22 GLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFDEMSDRNLVSWSAIISGYDQ 81
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G AL F ++ + + + ASV++A A + G +H ++ G V
Sbjct: 82 TGQPLLALNLFSQMRI---VPNEYVFASVISACASLTALSQGLQVHAQSLKLGCVSVSFV 138
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S+AL+ MY KCG + V MSE N ++YN++I G + + E F+ + +KG
Sbjct: 139 SNALISMYMKCGLCTDALLVHNVMSEPNAVSYNALIAGFVENQQPEKGIEAFKVMRQKGF 198
Query: 404 NPDESTFSALLCAC 417
PD TFS LL C
Sbjct: 199 APDRFTFSGLLGIC 212
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 67/127 (52%), Gaps = 3/127 (2%)
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
P I S+L AK G +H ++ G ++VS+ ++++YSKCG + ++F+
Sbjct: 3 PEAIGSLLHHCAKIKAFLHGLSLHAAALKTGMLSDIIVSNHVINLYSKCGNVIFARRMFD 62
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
MS+RN+++++++I G G A F + + P+E F++++ AC ++
Sbjct: 63 EMSDRNLVSWSAIISGYDQTGQPLLALNLFSQM---RIVPNEYVFASVISACASLTALSQ 119
Query: 426 GREIFTR 432
G ++ +
Sbjct: 120 GLQVHAQ 126
>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g49710-like [Cucumis sativus]
Length = 720
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 187/578 (32%), Positives = 294/578 (50%), Gaps = 41/578 (7%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+ +H+ L K LHAL K+ + + + + LY+ L +AR +FD T +V
Sbjct: 15 LKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFDHTHDCNV 74
Query: 70 FLWNSIIRAYA------LAHRFND-------------------------AKSLFKNLLRT 98
F +N++I AYA +AH+ D A LF +
Sbjct: 75 FSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFLEMREA 134
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
L D FT + I AC N L +R +H ++V+GL +AL+T+YSK + EA
Sbjct: 135 FLDMDGFTLSGIITACGINVGL--IRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEA 192
Query: 159 IKVFDGVS-DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
++F +S D D V NSM+ + K+L+L+ M G D +TL +++
Sbjct: 193 RRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTN 252
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN-CMNSAYHVFNSLFHPDLVTWSA 276
L G H +KS + +V S L+ +Y++C CM VF+ + +PDLV W+
Sbjct: 253 VQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNT 312
Query: 277 LITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I+GYS D +AL FR+L G + D + V++A + ++ G +HG ++
Sbjct: 313 MISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKL 372
Query: 336 GFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ + V++AL+ MYSKCG L +F+TM E N ++YNS+I G HG +Q+
Sbjct: 373 DIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQHGMGFQSLHL 432
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F+ ++E P TF ++L AC H G V DG+ F M +++GI+ + H+ M+ LLG
Sbjct: 433 FQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAGHFSCMIDLLG 492
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
AG L EA I ++ P DP ALL C I+GN +LA A++L + DP A
Sbjct: 493 RAGKLSEAERLIETI--PFDPGFFXWSALLGACRIHGNVELAIKAANRLLQLDPLNAAPY 550
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
VML+N Y+++GR D +R + D G++K+ G SW+
Sbjct: 551 VMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIE 588
>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 751
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 177/541 (32%), Positives = 272/541 (50%), Gaps = 15/541 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L++ K+LHA++ + L + F + + LY+ L LFDK QR++ W SII
Sbjct: 89 KELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLFDKMSQRNMVSWTSII 148
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVS 133
+A RF +A S F + F + + +AC+ L ++F VH +
Sbjct: 149 TGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTS---LGAIQFGTQVHCLVVKC 205
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G G + S L YSK + +A K F+ + D VL SMI GF G + K+L +
Sbjct: 206 GFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWTSMIDGFVKNGDFKKALTAY 265
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M+ D++ L +S S G+ +H LK F+ ++ + L MY++
Sbjct: 266 MKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYETFIGNALTDMYSKS 325
Query: 254 NCMNSAYHVFNSLFHPD---LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
M SA +VF H D +V+ +A+I GY + KAL F L +G + +
Sbjct: 326 GDMVSASNVFQ--IHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFT 383
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S++ A A A + G+ +HG V++ F+ VSS LVDMY KCG IQ+F+ +
Sbjct: 384 SLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKCGLFDHSIQLFDEIENP 443
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+ I +N+++ HG A E F +I +GL P+ TF LL C H G+V DG F
Sbjct: 444 DEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYF 503
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIY 488
+ M + YG+ K EHY ++ LLG AG L+EA FI ++ P +P V G + L C I+
Sbjct: 504 SSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNM--PFEPNVFGWCSFLGACKIH 561
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
G+ + A+ A +L + +P V+LSN YA++ +W+DV LR I D + K G SW
Sbjct: 562 GDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWEDVQSLRKMIKDGNMNKLPGYSW 621
Query: 549 V 549
V
Sbjct: 622 V 622
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 168/348 (48%), Gaps = 2/348 (0%)
Query: 90 SLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
S KNL + K D T A + + + +L + +H I G ++ S+ +
Sbjct: 60 SFLKNLFGSGHKLSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNL 119
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
YSK +D IK+FD +S ++V S+I+GFAH + ++L F M G+ ++ L
Sbjct: 120 YSKCGELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFAL 179
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
++ + G +H +K F +V S L MY++C ++ A F +
Sbjct: 180 SSVLQACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPC 239
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D V W+++I G+ + GD+ KAL + K+ D ++ S L+A + G +
Sbjct: 240 KDAVLWTSMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSL 299
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNIITYNSVILGLGLHGF 387
H +++ GFE + +AL DMYSK G + VF+ S+ +I++ ++I G
Sbjct: 300 HATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQ 359
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+A F D+ +G+ P+E TF++L+ AC + + G ++ ++ +
Sbjct: 360 IEKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVK 407
>gi|356533824|ref|XP_003535458.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 630
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 179/564 (31%), Positives = 293/564 (51%), Gaps = 26/564 (4%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
LH L L + Q L+ ++ HA + ++ F AT+LV YA L ++R +F+
Sbjct: 32 LHLLQLCIDLRSQKLA--QQSHAQILANGFAQNAFLATRLVSAYATCGELATSRFVFESV 89
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
+SV+LWNS+I Y H F A +LF+ + R + PD++T A + + E DL +
Sbjct: 90 EAKSVYLWNSLINGYVKNHDFRQALALFREMGRNGMLPDDYTLATVFKVFGELEDLVSGK 149
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA--- 181
+HG I G D + ++L++ Y + +A+KVFD ++ N +ISG A
Sbjct: 150 LIHGKGIRIGFVSDVVVGNSLMSMYCRCGEFGDAVKVFDETPHRNVGSFNVVISGCAALE 209
Query: 182 HCGFWDKSLQLFDWMLRL---GKTPDEYTLVGLI------SGLWEPSLLSVGQGIHGFCL 232
+C F L ++ LR+ G D +T+ L+ +G W+ G+ +H + +
Sbjct: 210 NCNFTSHD-DLSNFFLRMQCEGFKADAFTVASLLPVCCGDTGKWD-----YGRELHCYVV 263
Query: 233 KSSFD----SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
K+ D S ++ S L+ MY+R + VF+ + + ++ W+A+I GY Q G
Sbjct: 264 KNGLDLKMDSDVHLGSSLIDMYSRSKKVVLGRRVFDQMKNRNVYVWTAMINGYVQNGAPD 323
Query: 289 KALYYFRKLNMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
AL R + M+ G + + V + S L A A + G IHG+ I+ V + +AL
Sbjct: 324 DALVLLRAMQMKDGIRPNKVSLISALPACGLLAGLIGGKQIHGFSIKMELNDDVSLCNAL 383
Query: 348 VDMYSKCGYLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
+DMYSKCG L + FET S ++ IT++S+I GLHG +A + ++++G PD
Sbjct: 384 IDMYSKCGSLDYARRAFETSSYFKDAITWSSMISAYGLHGRGEEAIIAYYKMLQQGFKPD 443
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
T +L AC GLV++G I+ + +Y I+ E +V +LG +G L++A FI
Sbjct: 444 MITVVGVLSACSKSGLVDEGISIYKSLMTKYEIKPTVEICACVVDMLGRSGQLDQALEFI 503
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
+P P+V G+LL+ I+GNS ++ L E +P + + LSNTYA D RWD
Sbjct: 504 KEMPLDPGPSVWGSLLTASVIHGNSRTRDLAYRHLLELEPENPSNYISLSNTYASDRRWD 563
Query: 527 DVMKLRDDIVDNGLRKEAGVSWVS 550
V ++R + + GL+K G SW++
Sbjct: 564 VVTEVRTIMKERGLKKVPGCSWIT 587
>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 289/541 (53%), Gaps = 4/541 (0%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQRSVF 70
LS ++ K +HA + + L +D Y L+ AL+ ++++F + + ++F
Sbjct: 22 LSNGLNFFNQLKHIHARLLRLHLDQDN-YLLNLILCCALDFGSTNYSKLVFSQVKEPNIF 80
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVHGG 129
LWN++IR F+DA L+ ++ P+NFT + +AC+ D+ GL+ +H
Sbjct: 81 LWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLK-IHSL 139
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ +G D ++L++ Y K D+A+KVFD + D ++V ++I+G+ G + ++
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+ F +L +G PD ++LV +++ + G+ I + S +V++ L+ M
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM 259
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C + A +F+++ D+V+WS +I GY+ G +AL F ++ + K D +
Sbjct: 260 YVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTM 319
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
VL+A A + G + ++ F + ++ +AL+DMYSKCG + ++F M +
Sbjct: 320 VGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKK 379
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ + +N++++GL ++G F F + + G+ PDE+TF LLC C HGG VN+GR+
Sbjct: 380 KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF 439
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M + + EHY MV LLG AG L EA+ I ++P + V GALL C ++
Sbjct: 440 FNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHK 499
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ LAE V +L E +P V LSN Y+ + RW++ K+R + + ++K SW+
Sbjct: 500 DTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWI 559
Query: 550 S 550
Sbjct: 560 E 560
>gi|297824009|ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
gi|297325726|gb|EFH56146.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata]
Length = 1359
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 283/537 (52%), Gaps = 12/537 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V K L DP+ +T L+ +Y+ ++ A +F + + +WN+++ AY
Sbjct: 791 RQIHCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVEN 850
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A LF + + + PD+FT + + CS + GL + +G ++ + L + I S
Sbjct: 851 DNGYSALELFGFMRQKSVLPDSFTLSNVISCCS----MFGL-YDYGKSVHAELFKRPIQS 905
Query: 143 -----SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
SAL+T YSK +A VF + + D+V S+ISG G + ++L++F M
Sbjct: 906 TPAIESALLTLYSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMK 965
Query: 198 RLGKT--PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
+ PD + +I+ LS G +HG +K+ +V S L+ +Y++C
Sbjct: 966 DDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGL 1025
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A VF S+ ++V W+++I+ YS+ ++ F + QG D V I SVL A
Sbjct: 1026 PEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVA 1085
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ +A++ G +HGY ++ G + +AL+DMY KCG+ +F+ M +++IT+
Sbjct: 1086 ISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITW 1145
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N +I G G HG A F ++ + G PD+ TF +L+ AC H G V +G+ F M +
Sbjct: 1146 NLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACNHSGFVEEGKNFFEIMKQ 1205
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+YGI+ K EHY MV LLG AG LEEAYSFI ++P D ++ LLS + N +L
Sbjct: 1206 DYGIEPKMEHYANMVDLLGRAGRLEEAYSFIKAMPTEADSSIWLCLLSASRTHHNVELGI 1265
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
+ A +L +P +G+ V L N Y E G ++ KL ++ + GL+K+ G SW+ S
Sbjct: 1266 LSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGEMKERGLQKQPGCSWIEVS 1322
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/397 (28%), Positives = 199/397 (50%), Gaps = 3/397 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSA-RILFDKTPQRSVFLWNSIIRAYAL 81
K++H + + SL D F T L+ +Y + A R+ + + +V LWN +I +
Sbjct: 689 KQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGFGG 748
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ + L+ +K + ++ ACS++ + R +H + GL D
Sbjct: 749 SEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDPYV 808
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
S++L++ YSK ++ EA VF V D L + N+M++ + +L+LF +M +
Sbjct: 809 STSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQKSV 868
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD +TL +IS L G+ +H K S + S L+++Y++C C AY
Sbjct: 869 LPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDAYL 928
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYF--RKLNMQGKKADPVLIASVLAAAAKS 319
VF S+ D+V W +LI+G + G + +AL F K + K D ++ SV+ A A
Sbjct: 929 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACAGL 988
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G +HG +I+ G L+V V S+L+D+YSKCG + ++VF +M NI+ +NS+I
Sbjct: 989 EALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMI 1048
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ + E F ++ +G+ PD + +++L A
Sbjct: 1049 SCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVA 1085
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 201/440 (45%), Gaps = 21/440 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ-- 66
+L+ S +LS K +H + DPF AT LV +Y L A +FD Q
Sbjct: 567 LLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSG 626
Query: 67 ---RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA-CSE-NSDLP 121
R V + NS+I Y RF + F+ +L ++PD F+ + + C E N
Sbjct: 627 VSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEGNFRRE 686
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMISGF 180
+ +HG + + L DS +AL+ Y K L +A +VF + D ++VL N MI GF
Sbjct: 687 DGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNVMIVGF 746
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
+ SL+L+ + G + + + G+ IH +K D+
Sbjct: 747 GGSEICESSLELYMLAKSNSVKLVSTSFTGALGACSQSENSAFGRQIHCDVVKMGLDNDP 806
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
YVS+ L+SMY++C + A VF+ + L W+A++ Y + + AL F + +
Sbjct: 807 YVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALELFGFMRQK 866
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
D +++V++ + G +H + + + + + SAL+ +YSKCG
Sbjct: 867 SVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTLYSKCGCDTDA 926
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII--EKGLNPDESTFSALLCACC 418
VF++M E++++ + S+I GL +G +A + F D+ + L PD ++++ AC
Sbjct: 927 YLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVINACA 986
Query: 419 -----------HGGLVNDGR 427
HG ++ G+
Sbjct: 987 GLEALSFGLQVHGSMIKTGQ 1006
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 170/342 (49%), Gaps = 16/342 (4%)
Query: 105 FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG 164
FT+ + +ACS ++L + +HG IV G D +++LV Y K +D A++VFDG
Sbjct: 562 FTFPSLLKACSSLTNLSSGKTIHGSIIVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 621
Query: 165 -----VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
VS D+ +CNSMI G+ + + + F ML LG PD ++L ++S L +
Sbjct: 622 WSQSGVSARDVTVCNSMIDGYFKFRRFKEGVGCFRRMLVLGVRPDAFSLSIVVSVLCKEG 681
Query: 220 LLSV--GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF-HPDLVTWSA 276
G+ IHG+ L++S D ++ + L+ MY + A+ VF + ++V W+
Sbjct: 682 NFRREDGKQIHGYMLRNSLDGDSFLKTALIDMYFKFGLSTDAWRVFVEIEDKSNVVLWNV 741
Query: 277 LITGY--SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+I G+ S+ + LY K N K L A ++S N G IH V++
Sbjct: 742 MIVGFGGSEICESSLELYMLAKSN--SVKLVSTSFTGALGACSQSENSAFGRQIHCDVVK 799
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G + VS++L+ MYSKCG +G VF + ++ + +N+++ + Y A E
Sbjct: 800 MGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNGYSALEL 859
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGR----EIFTR 432
F + +K + PD T S ++ C GL + G+ E+F R
Sbjct: 860 FGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKR 901
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 92/198 (46%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++LS ++H + K + + F + L+ LY+ + A +F ++ WNS+I
Sbjct: 989 EALSFGLQVHGSMIKTGQVLNVFVGSSLIDLYSKCGLPEMALKVFTSMRPENIVAWNSMI 1048
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + + LF +L + PD+ + + A S + L + +HG + G+
Sbjct: 1049 SCYSRNNLPELSIELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIP 1108
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ +AL+ Y K A +F + L+ N MI G+ G +L LFD +
Sbjct: 1109 SDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDEL 1168
Query: 197 LRLGKTPDEYTLVGLISG 214
+ G+TPD+ T + LIS
Sbjct: 1169 KKAGETPDDVTFLSLISA 1186
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 43/107 (40%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S SL + K LH + + D L+ +Y A +F K +S
Sbjct: 1082 VLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKS 1141
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ WN +I Y A SLF L + PD+ T+ + AC+
Sbjct: 1142 LITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTFLSLISACN 1188
>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 781
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 172/542 (31%), Positives = 278/542 (51%), Gaps = 39/542 (7%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLF--- 92
RD +++ Y N L AR LF+ P+R V WN+++ YA +DA+S+F
Sbjct: 124 RDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRM 183
Query: 93 --KN------LLRTQLKPDNFTYACITRACSENSDLPGLR-----FVHGGAIVSGLG--- 136
KN LL ++ AC+ EN L FV IV
Sbjct: 184 PEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFD 243
Query: 137 ----RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
RD ++ + ++T Y++ IDEA ++FD D+ +M+SG+ +++ +L
Sbjct: 244 SMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEAREL 303
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS----SVLVS 248
FD K P+ + W L QG K FD + + +++
Sbjct: 304 FD------KMPERNEVS------WNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMIT 351
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
YA+C ++ A ++F+ + D V+W+A+I GYSQ G +AL F ++ +G + +
Sbjct: 352 GYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSS 411
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+S L+ A + G +HG +++ G+E V +AL+ MY KCG + +F+ M+
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++I+++N++I G HGF A FF + +GL PD++T A+L AC H GLV+ GR+
Sbjct: 472 GKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQ 531
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F MT++YG+ ++HY MV LLG AG LE+A++ + ++P D A+ G LL ++
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVH 591
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN++LAE A ++F +P V+LSN YA GRW DV KLR + D G++K G SW
Sbjct: 592 GNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSW 651
Query: 549 VS 550
+
Sbjct: 652 IE 653
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 169/392 (43%), Gaps = 52/392 (13%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WN I +Y R N+A +FK + R + +Y + N + R +
Sbjct: 67 WNVAISSYMRTGRCNEALRVFKRMPRWS----SVSYNGMISGYLRNGEFELARKLFDEMP 122
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
RD ++ + ++ Y + + +A ++F+ + + D+ N+M+SG+A G D +
Sbjct: 123 ----ERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARS 178
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMY 250
+FD M ++ + L+S + S + L S +++ VS + L+ +
Sbjct: 179 VFDRM----PEKNDVSWNALLSAYVQNSKME-----EACMLFKSRENWALVSWNCLLGGF 229
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+ + A F+S+ D+V+W+ +ITGY+Q G +A F + +Q +++
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVS 289
Query: 311 S-----VLAAAAKSANVWP-------GAVIHGYVIQHGFELS-----------VMVSSAL 347
++ A + + P A++ GYV E++ V + +
Sbjct: 290 GYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+ Y++CG + +F+ M +R+ +++ ++I G G +++A F + +G +
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 408 STFSALLCACC-----------HGGLVNDGRE 428
S+FS+ L C HG LV G E
Sbjct: 410 SSFSSALSTCADVVALELGKQLHGRLVKGGYE 441
>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 834
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 276/531 (51%), Gaps = 6/531 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA + + L D L+ Y + +A LF+ P +++ W +++ Y
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF ++ + LKPD + + I +C+ L VH I + LG DS +
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF-WD--KSLQLF-DWMLR 198
++L+ Y+K + +A KVFD + D+VL N+MI G++ G W+ ++L +F D R
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
L + P T V L+ + L + + IHG K + + S L+ +Y+ C C+
Sbjct: 449 LIR-PSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
+ VF+ + DLV W+++ GY QQ + +AL F +L + ++ D A+++ AA
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A+V G H +++ G E + +++AL+DMY+KCG + F++ + R+++ +NSV
Sbjct: 568 LASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSV 627
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A + ++ +G+ P+ TF +L AC H GLV DG + F M +G
Sbjct: 628 ISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFG 686
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ +TEHY+ MV LLG AG L +A I +P V +LLS C GN +LAE A
Sbjct: 687 IEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAA 746
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+DP+ MLSN YA G W + K+R+ + G+ KE G SW+
Sbjct: 747 EMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/413 (25%), Positives = 205/413 (49%), Gaps = 3/413 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L + + K+ RD + T L+ Y + + AR++FD P++S W ++I
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + LF L+ + PD + + + ACS L G + +H + GL D+ +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ +Y K + A K+F+G+ + +++ +++SG+ ++++LF M + G P
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D Y +++ L G +H + +K++ + YV++ L+ MYA+C+C+ A VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 264 NSLFHPDLVTWSALITGYSQQG---DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+ D+V ++A+I GYS+ G + +AL FR + + + + S+L A+A
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLT 468
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ IHG + ++G L + SAL+D+YS C L VF+ M ++++ +NS+
Sbjct: 469 SLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFA 528
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G +A F ++ PDE TF+ ++ A + V G+E ++
Sbjct: 529 GYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQL 581
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 199/415 (47%), Gaps = 8/415 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L S L +H + L D + + L+ LY+ + AR +F+K P+R+
Sbjct: 50 LLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERN 109
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSENSDLPGLRFV- 126
+ W++++ A + ++ +F RT+ P+ + + +ACS D G V
Sbjct: 110 LVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS-GLDGRGRWMVF 168
Query: 127 --HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+ SG RD + L+ Y K ID A VFD + + V +MISG G
Sbjct: 169 QLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMG 228
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
SLQLF ++ PD Y L ++S L G+ IH L+ + + +
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
VL+ Y +C + +A+ +FN + + ++++W+ L++GY Q + +A+ F ++ G K
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D +S+L + A + G +H Y I+ V+++L+DMY+KC L +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408
Query: 365 ETMSERNIITYNSVILG---LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ + +++ +N++I G LG ++A FRD+ + + P TF +LL A
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 203/443 (45%), Gaps = 5/443 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L ++HA KA+L D + L+ +YA + L AR +FD
Sbjct: 356 ILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAAD 415
Query: 69 VFLWNSIIRAYA---LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
V L+N++I Y+ ++A ++F+++ ++P T+ + RA + + L +
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQ 475
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG GL D SAL+ YS + ++ VFD + DLV+ NSM +G+
Sbjct: 476 IHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSE 535
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++L LF + + PDE+T +++ + + +GQ H LK + Y+++
Sbjct: 536 NEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNA 595
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MYA+C A+ F+S D+V W+++I+ Y+ G+ KAL K+ +G + +
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN 655
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ VL+A + + V G +++ G E +V + + G L ++ E
Sbjct: 656 YITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIE 715
Query: 366 TMSER-NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
M + I + S++ G G + E ++ D +F+ L G+
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAG-NVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWT 774
Query: 425 DGREIFTRMTEEYGIQAKTEHYI 447
+ +++ RM E ++ +I
Sbjct: 775 EAKKVRERMKVEGVVKEPGRSWI 797
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/296 (30%), Positives = 156/296 (52%), Gaps = 5/296 (1%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG IV GL D+ S+ L+ YS+ + A KVF+ + + +LV ++M+S H G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 186 WDKSLQLFDWMLRLGK-TPDEYTLVGLI---SGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
+++SL +F R K +P+EY L I SGL V Q + F +KS FD Y
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQ-LQSFLVKSGFDRDVY 184
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V ++L+ Y + ++ A VF++L VTW+ +I+G + G +L F +L
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D ++++VL+A + + G IH +++++G E+ + + L+D Y KCG +
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++F M +NII++ +++ G + +A E F + + GL PD S++L +C
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 107/224 (47%), Gaps = 4/224 (1%)
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
LL +HG + + Y+S++L+++Y+R M A VF + +LV+WS +++
Sbjct: 59 LLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVS 118
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN---VWPGAVIHGYVIQHG 336
+ G Y ++L F + K + I S A + W + ++++ G
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
F+ V V + L+D Y K G + VF+ + E++ +T+ ++I G G +Y + + F
Sbjct: 179 FDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFY 238
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
++E + PD S +L AC + G++I + YG++
Sbjct: 239 QLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHIL-RYGLE 281
>gi|297738890|emb|CBI28135.3| unnamed protein product [Vitis vinifera]
Length = 1974
Score = 281 bits (720), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 166/545 (30%), Positives = 279/545 (51%), Gaps = 39/545 (7%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L S + +L K+ HA+ SL D + ++ Y+ ++ A ++F + ++ V
Sbjct: 1385 LSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDV 1444
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WN +I +Y H+ A ++ + L+ D+ T + I A + S++ + H
Sbjct: 1445 VTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCY 1504
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
I L D + +++++ Y+K ID+A KVFD ++ DLVL N++++ +A G ++
Sbjct: 1505 CIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEA 1564
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L+LF + ++ P P+++S I GF
Sbjct: 1565 LKLF-YQMQFDSVP--------------PNVISWNSVILGFL------------------ 1591
Query: 250 YARCNCMNSAYHVFNSL----FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
R +N A +F+ + F P+L+TW+ LI+G +Q G +A+ +F+K+ G +
Sbjct: 1592 --RNGQVNEAKDMFSQMQSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPS 1649
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
I SVL A ++W G IHG++ +H F LSV V+++LVDMY+KCG + +VF
Sbjct: 1650 IASITSVLLACTDIPSLWYGRAIHGFITRHEFCLSVPVATSLVDMYAKCGSIDEAKKVFH 1709
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
MS + + YN++I LHG +A F+ + ++G+ PD TF+++L AC H GLVN+
Sbjct: 1710 MMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNE 1769
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G +F M ++ + EHY +V LL GNL+EA I ++P D + G+LL+ C
Sbjct: 1770 GLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLILTMPFQPDAHILGSLLTAC 1829
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
+ +L E ++ LF+ +P V LSN YA GRW +V +RD + GLRK G
Sbjct: 1830 REHHEIELGEYLSKHLFKLEPSNSGNYVALSNAYAAAGRWVEVSNMRDLMKVRGLRKNPG 1889
Query: 546 VSWVS 550
SW+
Sbjct: 1890 CSWIQ 1894
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 137/527 (25%), Positives = 258/527 (48%), Gaps = 17/527 (3%)
Query: 16 HQSLSRTKELHALVAKAS--LLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
++L +++HA + K ++ + TKLV YA + A LF + R+VF W
Sbjct: 1187 ERALHTGQQIHARILKNGDFFAKNEYVETKLVVFYAKCDFPEVAVRLFHRLRVRNVFSWA 1246
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFVHGGAIV 132
+I+ DA F + + PDNF + +AC + L GL + VHG +
Sbjct: 1247 AIVGLQCRMGFSEDALLGFIEMQENGVFPDNFVLPNVLKACG-SLQLIGLGKGVHGYVLK 1305
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G G SS+LV Y K ++++A KVFD + + ++V NSMI G+ G +++ +
Sbjct: 1306 MGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKNVVTWNSMIVGYVQNGLNQEAIDV 1365
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F M G P T+ +S L G+ H + +S D + + S +++ Y++
Sbjct: 1366 FYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHAIAILNSLDLDNILGSSIINFYSK 1425
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ A VF+ + D+VTW+ LI+ Y Q GKAL + + + D V ++S+
Sbjct: 1426 VGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGKALNMCHLMRSENLRFDSVTLSSI 1485
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+A+A ++N+ G H Y I+ E V+V+++++DMY+KC + +VF++ +ER++
Sbjct: 1486 LSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIIDMYAKCERIDDARKVFDSTTERDL 1545
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+ +N+++ G + +A + F + + P+ ++++++ G VN+ +++F++
Sbjct: 1546 VLWNTLLAAYAQVGLSGEALKLFYQMQFDSVPPNVISWNSVILGFLRNGQVNEAKDMFSQ 1605
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP----KPVDPAVSGALLSCCHI- 487
M + G Q + ++ L +G EA F + +P +++ LL+C I
Sbjct: 1606 M-QSLGFQPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIP 1664
Query: 488 ---YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
YG + I H+ + P + L + YA+ G D+ K+
Sbjct: 1665 SLWYGRAIHGFITRHEFCLSVPVATS----LVDMYAKCGSIDEAKKV 1707
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 132/502 (26%), Positives = 236/502 (47%), Gaps = 39/502 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S Q + K +H V K F ++ LV +Y VL AR +FD +++
Sbjct: 1283 VLKACGSLQLIGLGKGVHGYVLKMGFGACVFVSSSLVDMYGKCGVLEDARKVFDSMVEKN 1342
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WNS+I Y +A +F ++ ++P T A A + L + H
Sbjct: 1343 VVTWNSMIVGYVQNGLNQEAIDVFYDMRVEGIEPTRVTVASFLSASANLDALIEGKQGHA 1402
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI++ L D+I S+++ YSK+ LI++A VF + + D+V N +IS + K
Sbjct: 1403 IAILNSLDLDNILGSSIINFYSKVGLIEDAELVFSRMLEKDVVTWNLLISSYVQHHQVGK 1462
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L + M D TL ++S S + +G+ H +C++ + +S V++ ++
Sbjct: 1463 ALNMCHLMRSENLRFDSVTLSSILSASAVTSNIKLGKEGHCYCIRRNLESDVVVANSIID 1522
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ A VF+S DLV W+ L+ Y+Q G G+AL F + MQ P +
Sbjct: 1523 MYAKCERIDDARKVFDSTTERDLVLWNTLLAAYAQVGLSGEALKLFYQ--MQFDSVPPNV 1580
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I+ W ++ GF + V+ A DM+S+ LG
Sbjct: 1581 IS------------WNSVIL-------GFLRNGQVNEA-KDMFSQMQSLGF--------- 1611
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ N+IT+ ++I GL GF Y+A FF+ + E G+ P ++ +++L AC + GR
Sbjct: 1612 QPNLITWTTLISGLAQSGFGYEAILFFQKMQEAGIRPSIASITSVLLACTDIPSLWYGRA 1671
Query: 429 IFTRMTE-EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
I +T E+ + +V + G+++EA ++ + + + A++S +
Sbjct: 1672 IHGFITRHEFCLSVPVA--TSLVDMYAKCGSIDEAKK-VFHMMSSKELPIYNAMISAYAL 1728
Query: 488 YGNSDLAEIVAHQLFENDPRKG 509
+G + + A LF++ ++G
Sbjct: 1729 HGQA----VEALALFKHLQKEG 1746
>gi|357457477|ref|XP_003599019.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488067|gb|AES69270.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 944
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 277/539 (51%), Gaps = 1/539 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L + KE++ + L+ D AT +V +YA L AR LF R + W++ +
Sbjct: 313 RDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFL 372
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A + S+F+ + LKPD + + C+E S++ + +H AI + +
Sbjct: 373 SALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADME 432
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D + LV+ Y + L A+ +F+ + D+V+ N++I+GF G +L++F+ +
Sbjct: 433 SDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRL 492
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G PD T+VGL S L +G +HG KS F+S +V L+ MYA+C +
Sbjct: 493 QLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSL 552
Query: 257 NSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
S +F H D V+W+ +I GY G +A+ FR++ ++ + + V ++L A
Sbjct: 553 CSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPA 612
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ + + H +I+ GF ++ ++L+DMY+KCG L + F M ++ I++
Sbjct: 613 VSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCFHEMENKDTISW 672
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N+++ +HG A F + E + D ++ ++L AC H GL+ +G +IF M E
Sbjct: 673 NAMLSAYAMHGQGELAVALFSVMQESNVRVDSVSYISVLSACRHSGLIQEGWDIFASMCE 732
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
++ ++ EHY MV LLG AG +E S + + D V GALL+ C I+ N L E
Sbjct: 733 KHHVEPSMEHYACMVDLLGCAGLFDEVLSLLNKMTTEPDARVWGALLAACKIHSNVTLGE 792
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
+ H L + +PR + V+LS+ YA+ GRW+D + R I ++GL+K G SWV N
Sbjct: 793 VAVHHLLKLEPRNPVHHVVLSDIYAQCGRWNDARRTRSHINNHGLKKIPGYSWVGAHKN 851
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 203/411 (49%), Gaps = 7/411 (1%)
Query: 43 KLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP 102
KL+ N L F + S+ L+NS I+AY+ H F+ A +L+ +L+ LKP
Sbjct: 38 KLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAINLYHTILKIGLKP 97
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D FT+ + +AC+ D ++ + +GL D ++L+ + K+ +D A VF
Sbjct: 98 DKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFCKMGCLDNARNVF 157
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + D V N+MISG + ++L++F M G D+ +++ L + +
Sbjct: 158 DKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSILNLAPAVSRLGDVG 217
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ IHG+ ++ S VS+ L+ MY +C ++SA VF+ + D V+W+ ++ GY
Sbjct: 218 CCKSIHGYVVRRSI--CGVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYV 275
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G Y + L K+ K + V + + L A+ ++ G I+ Y +Q G ++
Sbjct: 276 KNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIV 335
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V++ +V MY+KCG L ++F ++ R+++ +++ + L G+ + F+ + +G
Sbjct: 336 VATPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEG 395
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
L PD++ S L+ C + G ++ Y I+A E I MV L
Sbjct: 396 LKPDKAILSILVSGCTEISNIGLG-----KIMHCYAIKADMESDISMVTTL 441
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 192/395 (48%), Gaps = 3/395 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H V + S+ + L+ +Y + SA+ +FD+ R W +++ Y
Sbjct: 220 KSIHGYVVRRSIC--GVVSNSLIDMYCKCGDVHSAQRVFDRMGVRDDVSWATMMAGYVKN 277
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ + L + R +K + +E DL + ++ A+ GL D + +
Sbjct: 278 GCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRDLEKGKEIYNYALQMGLMSDIVVA 337
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ +V Y+K + +A ++F + DLV ++ +S G+ + L +F M G
Sbjct: 338 TPIVCMYAKCGELKKARELFLSLEGRDLVAWSAFLSALVETGYPREVLSIFQVMQYEGLK 397
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ L L+SG E S + +G+ +H + +K+ +S + + LVSMY R A +
Sbjct: 398 PDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYAMTL 457
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN + D+V W+ LI G+++ GD AL F +L + G D + + +A A ++
Sbjct: 458 FNRMQIKDIVVWNTLINGFTKYGDPHLALEMFNRLQLSGILPDSGTMVGLFSACAIMDDL 517
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILG 381
G +HG + + GFE + V AL+DMY+KCG L ++F T ++ +++N +I G
Sbjct: 518 DLGTCLHGGIEKSGFESDIHVKVALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAG 577
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+G++ +A FR + + + P+ TF +L A
Sbjct: 578 YLHNGYSNEAISTFRRMKLENVRPNLVTFVTILPA 612
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 186/403 (46%), Gaps = 13/403 (3%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + T L+ ++ L +AR +FDK P + WN++I + + +A +F +
Sbjct: 133 DVYIGTSLIDMFCKMGCLDNARNVFDKMPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQ 192
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ D + + A S D+ + +HG + + + S++L+ Y K +
Sbjct: 193 MEGFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSIC--GVVSNSLIDMYCKCGDVH 250
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +VFD + D V +M++G+ G + + LQL M R ++ +V + +
Sbjct: 251 SAQRVFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVA 310
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
E L G+ I+ + L+ S V++ +V MYA+C + A +F SL DLV WSA
Sbjct: 311 EMRDLEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLSLEGRDLVAWSA 370
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
++ + G + L F+ + +G K D +++ +++ + +N+ G ++H Y I+
Sbjct: 371 FLSALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKAD 430
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
E + + + LV MY + + +F M ++I+ +N++I G +G + A E F
Sbjct: 431 MESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIVVWNTLINGFTKYGDPHLALEMFN 490
Query: 397 DIIEKGLNPDESTFSALLCACC-----------HGGLVNDGRE 428
+ G+ PD T L AC HGG+ G E
Sbjct: 491 RLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFE 533
>gi|357483151|ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 663
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/577 (29%), Positives = 285/577 (49%), Gaps = 35/577 (6%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
LH+L+ + SL + K +HA + L KLV L A LFD+
Sbjct: 38 TLHYLIDQCI----SLKQLKHVHAQIILHGLATQVLTLGKLVSSSVQLRDLRYAHKLFDQ 93
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
PQ + F++N +I+ Y+ + + L++ ++ + P+ FT + +AC+ S
Sbjct: 94 IPQPNKFMFNHLIKGYSNSSDPIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLG 153
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
VH + G+G + +A++ Y LI A +VFD +S+ LV NSMI+G++
Sbjct: 154 VCVHAQSFKLGMGSHACVQNAILNIYVACGLITSARRVFDDISERTLVSWNSMINGYSKM 213
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++++ +F M +G PD +TLVGL+S + +G+ +H + + + V+
Sbjct: 214 GRSEEAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVT 273
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS--------------------- 282
+ L+ MYA+C + A VF+ + D+V+W+ +I Y+
Sbjct: 274 NALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVV 333
Query: 283 ----------QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
Q+G Y +A+ F ++ G A+ + ++L++ + ++ G H Y+
Sbjct: 334 SWNSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYI 393
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+ LS + +A++DMY+KCG L + VF M E+N +++N +I L LHG+ +A
Sbjct: 394 FDNNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGALALHGYGKEAI 453
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
E F + G+ PDE TF+ LL AC H GLV+ G+ F M +GI EHY MV L
Sbjct: 454 EMFEKMQASGVCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDL 513
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG G L EA S I +P D V ALL C YGN + + + QL E
Sbjct: 514 LGRRGLLGEAISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLY 573
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN Y+E RWDD+ + + NG++K +S++
Sbjct: 574 VLLSNMYSESQRWDDMKNIWKILDQNGIKKCRAISFI 610
>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
pumila]
Length = 710
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 167/578 (28%), Positives = 298/578 (51%), Gaps = 39/578 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTP 65
+L K+ QSL + +HA + K L + +KL+ L+ + LP A +FD
Sbjct: 8 LLHXCKTLQSL---RIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQ 64
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ + +WN++ R +AL+ A L+ ++ L P+++T+ + ++C+++ +
Sbjct: 65 EPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQ 124
Query: 126 VHGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSL 154
+HG + G RD ++ +AL+T Y+
Sbjct: 125 LHGQVLKFGFDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSYTALITGYASRGX 184
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
I+ A K+FD + D+V N+ ISG+A G + ++L+LF M++ PDE T+V ++S
Sbjct: 185 IESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSA 244
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ + +G+ +H + F + + L+ +Y++C + +A +F L + D+++W
Sbjct: 245 CAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISW 304
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ LI GY+ Y +AL F+ + G+K + V + S+L+A A + G IH Y+ +
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDK 364
Query: 335 H--GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
G + + ++L+DMY+KCG + QVF++M R++ ++N++I G +HG AF
Sbjct: 365 RLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAF 424
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
+ F + + G+ PD+ TF LL AC H G+++ GR IF MT +Y + K EHY M+ L
Sbjct: 425 DIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDL 484
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
G +G +EA I ++ D + +LL C ++GN +L E A L + +P
Sbjct: 485 XGHSGLFKEAEKMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSY 544
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+LSN YA RW++V K R + D G++K G S +
Sbjct: 545 VLLSNIYATAERWNEVAKTRALLNDKGMKKVPGCSSIE 582
>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g08820-like [Cucumis sativus]
Length = 688
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 288/541 (53%), Gaps = 4/541 (0%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQRSVF 70
LS ++ K +HA + + L +D Y L+ AL+ ++++F + + ++F
Sbjct: 22 LSNGLNFFNQLKHIHARLLRLHLDQDN-YLLNLILCCALDFGSTNYSKLVFSQVKEPNIF 80
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVHGG 129
LWN++IR F+DA L+ ++ P+NFT + +AC+ D+ GL+ +H
Sbjct: 81 LWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLK-IHSL 139
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+ +G D ++L++ Y K D+A+KVFD + D ++V ++I+G+ G + ++
Sbjct: 140 LVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREA 199
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+ F +L +G PD ++LV +++ + G+ I + S +V++ L+ M
Sbjct: 200 IGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDM 259
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C + A +F+++ D+V+WS +I GY+ G +AL F ++ + K D +
Sbjct: 260 YVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTM 319
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
VL+A A + G + ++ F + ++ +AL+DMYSKCG + ++F M
Sbjct: 320 VGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMKR 379
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ + +N++++GL ++G F F + + G+ PDE+TF LLC C HGG VN+GR+
Sbjct: 380 KDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQF 439
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M + + EHY MV LLG AG L EA+ I ++P + V GALL C ++
Sbjct: 440 FNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHK 499
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ LAE V +L E +P V LSN Y+ + RW++ K+R + + ++K SW+
Sbjct: 500 DTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRACSWI 559
Query: 550 S 550
Sbjct: 560 E 560
>gi|359480813|ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Vitis vinifera]
Length = 634
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 185/616 (30%), Positives = 294/616 (47%), Gaps = 74/616 (12%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F L+ L L+L + ++L + K+LH + L PF TKLV++YA L SA+ LFD
Sbjct: 24 FQLNHL-LQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFD 82
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
K Q +VF W +I+ Y+ ++ + + + PD + + + RAC + L
Sbjct: 83 KLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLPDKYVFPKVFRACGQLLWLEV 142
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VH ++ G D ++L+ YSK + +VFD + + D++ NSMISG+
Sbjct: 143 GIQVHKDVVICGCEFDLQVCNSLIDMYSKSGDVGSGRRVFDEMVERDVLSWNSMISGYVC 202
Query: 183 CGFWDKSLQLFDWMLRLGKTP---------DEYTLVGLISGLW-------EPSLLSV--- 223
GF + S++L M G P D Y +GL W EP+++S+
Sbjct: 203 NGFLEFSVELLASMRIRGFEPDMVTWNTVMDAYCRMGLCDEAWEIFEQIKEPNIISLTTL 262
Query: 224 ------------------------------------------------GQGIHGFCLKSS 235
GQ IHG+ ++S
Sbjct: 263 VSGYSRIGNHEKSLGIFREMMSRRVAFPDLDSLSSVLVSCRHLGALVCGQEIHGYGIRSV 322
Query: 236 FDS--YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
S Y + L++MY +C + A +VF + D+VTW+A+I G+ AL
Sbjct: 323 DSSSFYKSAGAALLTMYVKCKRIQDALNVFELMDRFDVVTWNAMILGFVDLEMGHLALEC 382
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F K+ G + + I++VL A ++ G +H Y+ ++ F + V +AL+ MYSK
Sbjct: 383 FSKMQRSGIMNNQITISTVLPA----CDLKSGKQVHAYITKNSFSSVIPVWNALIHMYSK 438
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG +G +F M R+++++N++I G G+HG A + RD+ + P+ TF++
Sbjct: 439 CGCIGTAYSIFSNMISRDLVSWNTMIGGFGMHGLGQFALQLLRDMSHSDVCPNSVTFTSA 498
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV 473
L AC H GLV++G E+F MT ++G EH+ +V LL A LE+A FI +P
Sbjct: 499 LSACSHSGLVDEGMELFHTMTRDFGFTPGMEHFSCVVDLLARADRLEDAVGFIEKMPLKP 558
Query: 474 DPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
+ ALL+ C N +A++ A QLF+ +P V LSN YA GRWDD + +R
Sbjct: 559 SKHIWSALLAACRAQQNVSVAKLAAEQLFQLEPEHAGNYVTLSNIYARAGRWDDAVAVRK 618
Query: 534 DIVDNGLRKEAGVSWV 549
+ D GL K +G SW+
Sbjct: 619 LMEDRGLVKPSGYSWI 634
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 291 LYYFRKLNMQGKKADPVLIAS-----VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
++ F++ ++P L++S +L + S + G +H ++I G + + +
Sbjct: 3 VFLFKRAISSLPTSNPNLLSSFQLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLT 62
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
LV MY+ CG LG +F+ +S+ N+ + +++ +G + + + ++ KG+ P
Sbjct: 63 KLVQMYADCGDLGSAQALFDKLSQPNVFAWTAILGFYSRNGLSDECVRTYSEMKLKGVLP 122
Query: 406 DESTFSALLCAC 417
D+ F + AC
Sbjct: 123 DKYVFPKVFRAC 134
>gi|225439799|ref|XP_002273893.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37310-like [Vitis vinifera]
Length = 667
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/582 (29%), Positives = 297/582 (51%), Gaps = 40/582 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+++ H+ L + K+LHA + +SL D F A+KL+ Y+ +N L A +FDK ++
Sbjct: 40 LIQHCSDHRLLRQAKQLHARIVLSSLTPDNFLASKLITFYSKSNHLYEAHKVFDKILDKN 99
Query: 69 VFLWNSIIRAYALAH---RFNDAKSLFKNLLRTQLKPDNFTYACITRACS---ENSDLPG 122
+F WN+++ Y++ + + S LKPDNFT C+ +A S +S L
Sbjct: 100 IFSWNAMLIGYSIHNMHVHTLNLLSSLLPSYSLTLKPDNFTITCVLKALSVLFPDSILA- 158
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ V + G D +AL+T YS+ A +FD + D D+V NSMI+G++
Sbjct: 159 -KEVQCFVLRHGFDSDIFVVNALITYYSRCDEYGIARILFDRMHDRDIVSWNSMIAGYSQ 217
Query: 183 CGFWDKSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
GF++ +L+ ML G P+ T+V ++ + + L G +H F ++ +
Sbjct: 218 GGFYEDCKELYRKMLDSTGLRPNGVTVVSVLQACAQTNDLVFGMKVHQFIIERKVEMDVS 277
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN--- 298
+ L+ +YA+C ++ A +FN + + D VT+ ++++GY G KA+ FR++
Sbjct: 278 AHNSLIGLYAKCGSLDYARELFNEMSNKDEVTYGSIVSGYMTHGFVDKAMDLFREMKNPR 337
Query: 299 --------------------------MQ--GKKADPVLIASVLAAAAKSANVWPGAVIHG 330
MQ G + + V ++S+L + +N+ G IH
Sbjct: 338 LSTWNAVISGLVQNNCNEGILELVQEMQEFGFRPNAVTLSSILPTFSCFSNLKGGKAIHA 397
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
Y I++G+ ++ V+++++D Y+K G+L VF+ +R++I + ++I HG
Sbjct: 398 YAIRNGYAHNIYVATSIIDAYAKLGFLRGAQWVFDQSKDRSLIVWTAIISAYSAHGDANA 457
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A F D++ G PD TF+A+L AC H G+VN+ +IF M +YG Q EHY MV
Sbjct: 458 ALRLFGDMLSNGTQPDPVTFTAVLAACAHSGMVNEAWKIFDEMFLKYGFQPCVEHYACMV 517
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
+L AG L EA FI +P + V GALL+ + G+ +L + V LF +P
Sbjct: 518 GVLSRAGMLSEAAEFICKMPIEPNAKVWGALLNGVSVSGDVELGKFVCDHLFNMEPENTG 577
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
V+++N Y++ GRW++ +R+ + GL+K G SW+ S
Sbjct: 578 NYVIMANLYSQAGRWEEAENIREKMKKIGLKKIPGTSWIETS 619
>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
Length = 667
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 261/495 (52%), Gaps = 21/495 (4%)
Query: 56 SARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
SA LFDK R V WNS+I Y ++K ++ + D T + C+
Sbjct: 65 SASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCA 124
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
++ L + VH AI S R S+ L+ YSK +D A++VF+ + + ++V S
Sbjct: 125 KSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTS 184
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
MI+G+ G+ D ++ L M + G D + ++ L G+ +H + ++
Sbjct: 185 MIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
S +V + L+ MYA+C M A VF+++ D+++W+ ++ G+
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV------GEL-------- 290
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
K D +A +L A A + + G IHGY++++G+ V++ALVD+Y KCG
Sbjct: 291 -------KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
LGL +F+ + ++++++ +I G G+HG+ +A F ++ + G+ PDE +F ++L
Sbjct: 344 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 403
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H GL+ G F M ++ I+ K EHY MV LL GNL +AY FI +LP D
Sbjct: 404 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 463
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ GALL C IY + +LAE VA ++FE +P Y V+L+N YAE +W++V ++R+ I
Sbjct: 464 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 523
Query: 536 VDNGLRKEAGVSWVS 550
GLRK G SW+
Sbjct: 524 GKKGLRKNPGCSWIE 538
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 182/387 (47%), Gaps = 71/387 (18%)
Query: 43 KLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP 102
KLV YA L R +FD +++V+LWN ++ YA F ++ LFK ++ ++
Sbjct: 1 KLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIE- 59
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
G+ S ++S L F
Sbjct: 60 ---------------------------------GKRSESASEL----------------F 70
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + D D++ NSMISG+ G ++ L ++ M+ LG D T++ ++ G + LS
Sbjct: 71 DKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLS 130
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G+ +H +KSSF+ S+ L+ MY++C ++ A VF + ++V+W+++I GY+
Sbjct: 131 LGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYT 190
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G A+ +++ +G K D V I S+L A A+S ++ G +H Y+ + ++
Sbjct: 191 RDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLF 250
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V +AL+DMY+KCG + VF TM ++II++N+++
Sbjct: 251 VCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMV---------------------GE 289
Query: 403 LNPDESTFSALLCACCHGGLVNDGREI 429
L PD T + +L AC + G+EI
Sbjct: 290 LKPDSRTMACILPACASLSALERGKEI 316
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 179/402 (44%), Gaps = 31/402 (7%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H+L K+S R ++ L+ +Y+ L A +F+K +R+V W S+I
Sbjct: 128 TLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIA 187
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y + A L + + + +K D I AC+ + L + VH + +
Sbjct: 188 GYTRDGWSDGAIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMAS 247
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ +AL+ Y+K ++ A VF + D++ N+M+
Sbjct: 248 NLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGEL----------------- 290
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD T+ ++ S L G+ IHG+ L++ + S +V++ LV +Y +C +
Sbjct: 291 ----KPDSRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLG 346
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ + DLV+W+ +I GY G +A+ F ++ G + D V S+L A +
Sbjct: 347 LARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACS 406
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMSERNIITY 375
S + G Y++++ F + + + +VD+ S+ G L + ET+ I
Sbjct: 407 HSGLLEQGWRFF-YIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLP----IAP 461
Query: 376 NSVILGLGLHGF-TYQAFEFFRDIIEK--GLNPDESTFSALL 414
++ I G L G Y E + E+ L P+ + + LL
Sbjct: 462 DATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLL 503
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 1/120 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L R KE+H + + D A LV LY VL AR+LFD P +
Sbjct: 300 ILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKD 359
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVH 127
+ W +I Y + N+A + F + ++PD ++ I ACS + L G RF +
Sbjct: 360 LVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFY 419
>gi|225438593|ref|XP_002276456.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial [Vitis vinifera]
gi|296082485|emb|CBI21490.3| unnamed protein product [Vitis vinifera]
Length = 637
Score = 281 bits (719), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/536 (33%), Positives = 283/536 (52%), Gaps = 4/536 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L ++ +H V K+ D F T +V +Y + L A LF + P+R V WNS+I
Sbjct: 69 NLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVASWNSMIL 128
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+A + SLF + ++ D+ T +T + DL L +H I G+
Sbjct: 129 GFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDT 188
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDL---VLCNSMISGFAHCGFWDKSLQLFD 194
D S+ + AY+K A VFDG+ D L V NSMI+G+AH K++ F
Sbjct: 189 DVSVSNTWIAAYAKCGEFGLAETVFDGI-DKGLKTGVSWNSMIAGYAHFEQCSKAVGFFK 247
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
ML G D T++ L+S +P +L G+ IH ++ DS V + L+SMY++C
Sbjct: 248 KMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCG 307
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ SA ++F+++ V+W+A+I GY+++GD +A+ F + G+K D V I S+++
Sbjct: 308 DIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMS 367
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
++ + G I Y +G + ++MV +AL+D+Y+KCG + ++F TM E+++++
Sbjct: 368 GCGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVS 427
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ ++I G L+G +A F ++E GL P+ TF A+L AC H G + G E F MT
Sbjct: 428 WTTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMT 487
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+ Y I +HY M LLG G L+EA+ FI ++P D + LLS C I+ N +
Sbjct: 488 KVYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIG 547
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E VA+ LFE +P+ V ++N YA G+WD V +R + N K G S V
Sbjct: 548 ECVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSPGKSLVQ 603
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 202/422 (47%), Gaps = 4/422 (0%)
Query: 53 VLPSARILFDKTPQR-SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACIT 111
V P+A F++ +V WNS I + A LF+ + + L+P+N T+ +
Sbjct: 2 VTPAATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVA 61
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
+ACS+ +L + VH + S D +++V Y K S + A +F + D+
Sbjct: 62 KACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPKRDVA 121
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
NSMI GFA GF D+ + LF M G D T++GL L + + IH F
Sbjct: 122 SWNSMILGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFG 181
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH--PDLVTWSALITGYSQQGDYGK 289
+K D+ VS+ ++ YA+C A VF+ + V+W+++I GY+ K
Sbjct: 182 IKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTGVSWNSMIAGYAHFEQCSK 241
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
A+ +F+K+ G +AD I S+L++ + ++ G +IH + IQ G + + V + L+
Sbjct: 242 AVGFFKKMLCGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLIS 301
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MYSKCG +G +F+ M + +++ ++I G G +A F + G PD T
Sbjct: 302 MYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGYAEKGDLDEAMTLFSAMEAVGEKPDLVT 361
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
+L+ C G + G+ I T T G++ ++ + G+++ A +++
Sbjct: 362 IISLMSGCGQTGALELGKWIDTYATAN-GLKDNLMVCNALIDVYAKCGSMDNARELFYTM 420
Query: 470 PK 471
P+
Sbjct: 421 PE 422
>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
Length = 1097
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 169/536 (31%), Positives = 269/536 (50%), Gaps = 1/536 (0%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +L K +H +A + D L+ +YA + AR++FD R V WN+
Sbjct: 435 STSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNA 494
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
++ A ++A ++F + + L PD+ TY + L + VH A+ +G
Sbjct: 495 MMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETG 554
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L D SA + Y + ID+A +FD +S + N+MI G A ++L LF
Sbjct: 555 LISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFL 614
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M R G PD T + ++S + L + +H + V + LV Y++C
Sbjct: 615 QMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDL-RVGNALVHTYSKCG 673
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ A VF+ + ++ TW+ +I G +Q G A +F ++ +G D S+L+
Sbjct: 674 NVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILS 733
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A + + +H + + G + V +ALV MY+KCG + VF+ M ER++ +
Sbjct: 734 ACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERDVFS 793
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ +I GL HG +A +FF + +G P+ ++ A+L AC H GLV++GR F MT
Sbjct: 794 WTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACSHAGLVDEGRRQFLSMT 853
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++YGI+ EHY MV LLG AG LEEA FI ++P D A GALL C YGN ++A
Sbjct: 854 QDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNMPIEPDDAPWGALLGACVTYGNLEMA 913
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E A + + P+ + V+LSN YA G+W+ + +R + G+RKE G SW+
Sbjct: 914 EFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKLLVRSMMQRKGIRKEPGRSWIE 969
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 127/423 (30%), Positives = 206/423 (48%), Gaps = 3/423 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S +L KE+H+ A L D LV +YA + + AR++FD +R
Sbjct: 326 ILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERD 385
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI--TRACSENSDLPGLRFV 126
+F W +I A R +A SLF + R P+ TY I A + S L ++ V
Sbjct: 386 IFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVV 445
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H A +G D +AL+ Y+K ID+A VFDG+ D D++ N+M+ G A G
Sbjct: 446 HKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCG 505
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ +F M + G PD T + L++ L +H +++ S V S
Sbjct: 506 HEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAF 565
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY RC ++ A +F+ L + TW+A+I G +QQ +AL F ++ +G D
Sbjct: 566 IHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDA 625
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
++L+A + +H + G + + V +ALV YSKCG + QVF+
Sbjct: 626 TTFINILSANVDEEALEWVKEVHSHATDAGL-VDLRVGNALVHTYSKCGNVKYAKQVFDD 684
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M ERN+ T+ +I GL HG + AF F ++ +G+ PD +T+ ++L AC G +
Sbjct: 685 MVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWV 744
Query: 427 REI 429
+E+
Sbjct: 745 KEV 747
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 210/409 (51%), Gaps = 4/409 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + + K++H + K+ + ++ + A KL+R+Y L AR +FDK +++
Sbjct: 124 ILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKN 183
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+++W ++I YA DA ++ + + +P+ TY I +AC +L + +H
Sbjct: 184 IYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHA 243
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I SG D +ALV Y K I++A +FD + + +++ MI G AH G +
Sbjct: 244 HIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWTVMIGGLAHYGRGQE 303
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ LF M R G P+ YT V +++ L + +H + + V + LV
Sbjct: 304 AFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVH 363
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ ++ A VF+ + D+ +W+ +I G +Q G +A F ++ G +
Sbjct: 364 MYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTT 423
Query: 309 IASVL---AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
S+L A A+ SA W V+H + + GF + + +AL+ MY+KCG + VF+
Sbjct: 424 YLSILNASAIASTSALEWV-KVVHKHAEEAGFISDLRIGNALIHMYAKCGSIDDARLVFD 482
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
M +R++I++N+++ GL +G ++AF F + ++GL PD +T+ +LL
Sbjct: 483 GMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLL 531
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 170/331 (51%)
Query: 86 NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSAL 145
DA ++ K ++ + D+F+Y I + C + D+ + VH I SG+ ++ ++ L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159
Query: 146 VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDE 205
+ Y + + A +VFD + ++ + +MI G+A G + +++++D M + P+E
Sbjct: 160 LRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNE 219
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
T + ++ P L G+ IH ++S F S V + LV+MY +C + A +F+
Sbjct: 220 ITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDK 279
Query: 266 LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG 325
+ ++++W+ +I G + G +A + F ++ +G + S+L A A + +
Sbjct: 280 MVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWV 339
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
+H + + G L + V +ALV MY+K G + VF+ M+ER+I ++ +I GL H
Sbjct: 340 KEVHSHAVNAGLALDLRVGNALVHMYAKSGSIDDARVVFDGMTERDIFSWTVMIGGLAQH 399
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
G +AF F + G P+ +T+ ++L A
Sbjct: 400 GRGQEAFSLFLQMQRNGCLPNLTTYLSILNA 430
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 122/235 (51%)
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
++ G D ++ V ++ + + + + +H +KS + YV++ L+ +Y RC +
Sbjct: 110 VQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRL 169
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+ L ++ W+ +I GY++ G A+ + K+ + + + + S+L A
Sbjct: 170 QCARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKAC 229
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
N+ G IH ++IQ GF+ V V +ALV+MY KCG + +F+ M ERN+I++
Sbjct: 230 CCPVNLKWGKKIHAHIIQSGFQSDVRVETALVNMYVKCGSIEDAQLIFDKMVERNVISWT 289
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+I GL +G +AF F + +G P+ T+ ++L A G + +E+ +
Sbjct: 290 VMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHS 344
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
QG D ++L K ++ +H +I+ G E ++ V++ L+ +Y +CG L
Sbjct: 112 QGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQC 171
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
QVF+ + ++NI + ++I G +G A + + ++ P+E T+ ++L ACC
Sbjct: 172 ARQVFDKLLKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPNEITYLSILKACCC 231
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ G++I + + G Q+ +V + G++E+A
Sbjct: 232 PVNLKWGKKIHAHIIQS-GFQSDVRVETALVNMYVKCGSIEDA 273
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L KE+H A L+ D LV +YA + AR +FD +R
Sbjct: 731 ILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDMVERD 790
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
VF W +I A R +A F + KP+ ++Y + ACS
Sbjct: 791 VFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYSYVAVLTACS 837
>gi|28564593|dbj|BAC57760.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50509708|dbj|BAD31746.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 703
Score = 281 bits (719), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 181/579 (31%), Positives = 295/579 (50%), Gaps = 44/579 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN-NVLPSA-RILFDKTPQ 66
+L +SH L +LHAL L R P +L+ +Y + ++LPSA + D T
Sbjct: 81 LLHHHRSHLRLG--VQLHALSLSLGLSRHPILLPRLLSVYTSHPSLLPSAASVAADST-- 136
Query: 67 RSVFLWNSIIRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ L +++ + L H A + ++ + + + PD FTY + RAC+E +L R
Sbjct: 137 --LPLPYNVLISSCLRHGLPLQALAAYQEMGKNGVLPDVFTYPSVLRACAEARELVLGRA 194
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH A +G+ + +AL++ Y+K + A KVFDG+ D+V NSMIS +A G
Sbjct: 195 VHMHAAGAGMDGNLFFQNALMSMYAKCGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQ 254
Query: 186 WDKSLQLF-------------DW----------------------MLRLGKTPDEYTLVG 210
W ++++LF W M+R G D TLV
Sbjct: 255 WAEAMELFRRMRDEGTEVNSVTWNTIAGGYIQMRDYRAAVGLIREMVRGGAEVDYVTLVI 314
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++ L +G+ IHG ++ D + VS+ L++MYARC M A +F L P
Sbjct: 315 GLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDMECARMLFRMLECPG 374
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
+VTW+ +++ ++ +A FR++ +G K + V + + LA A+ AN+ G +HG
Sbjct: 375 VVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCARVANLQHGQELHG 434
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
++++HGF+ ++ ++L+DMYSK G L + VF+TM + ++I+Y S+I G G+ G
Sbjct: 435 HIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTSMIAGYGMQGKGTV 494
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A F +I+ G+ PD +L AC H GLV +G E+F +M YGI+ + EHY M+
Sbjct: 495 ALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISYGIKPQMEHYSCMI 554
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
L AG LE+A + P P + AL+ CH GN ++ E A +L E
Sbjct: 555 DLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERAARKLLEMRTENAG 614
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ V+++N YA G WD++ +R + D G+ K G++W
Sbjct: 615 HYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWT 653
>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 281 bits (718), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 162/502 (32%), Positives = 269/502 (53%), Gaps = 11/502 (2%)
Query: 60 LFDKTPQRS-VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
LF+K R+ V+ WNS+I A ++ F + + +KP+ T+ C ++CS
Sbjct: 37 LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
DL + H A+V G D SSAL+ YSK + A +FD + ++V S+I+
Sbjct: 97 DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLIT 156
Query: 179 GFAHCGFWDKSLQLFDWML---------RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
G+ ++L +F L +G + D ++ ++S S +V +G+HG
Sbjct: 157 GYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHG 216
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+K D V + L+ YA+C ++ + VF+ + D+V+W+++I Y+Q G
Sbjct: 217 VAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTD 276
Query: 290 ALYYFR-KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
A F L G K + V ++++L A A + G +H VI+ G+ +V+++++++
Sbjct: 277 AFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSII 336
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
DMY KCG + F+ M E+N+ ++ ++I G G+HGF +A + F +I G+ P+
Sbjct: 337 DMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYI 396
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
TF ++L AC H G + +G F M+ EY ++ EHY MV LLG AG ++EAY+ I S
Sbjct: 397 TFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEAYNLIKS 456
Query: 469 LPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDV 528
+ D + G+LL+ C I+ + +LAEI A +LF+ DP Y V+L+N YA+ GRW DV
Sbjct: 457 MKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADAGRWKDV 516
Query: 529 MKLRDDIVDNGLRKEAGVSWVS 550
++R + D GL K G S V
Sbjct: 517 ERMRILVKDRGLVKPPGYSLVE 538
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 190/412 (46%), Gaps = 22/412 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ K+ H D F ++ L+ +Y+ L +AR+LFD+ P+R++ W S+I
Sbjct: 98 LNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVLFDEIPRRNIVTWTSLITG 157
Query: 79 YALAHRFNDAKSLFKNLL---------RTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
Y ++A +FK L D+ + ACS S+ VHG
Sbjct: 158 YVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGVHGV 217
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
AI GL + + L+ AY+K + + KVFD +++ D+V NSMI+ +A G +
Sbjct: 218 AIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQNGLSTDA 277
Query: 190 LQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++F ML+ G +E TL L+ L VG +H +K + + +++ ++
Sbjct: 278 FEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVIMATSIID 337
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C A + F+ + ++ +W+A+I GY G +AL F ++ G K + +
Sbjct: 338 MYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAGVKPNYIT 397
Query: 309 IASVLAAAAKSANV-----WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
SVLAA + + + W A+ H Y ++ G E +VD+ + GY+ +
Sbjct: 398 FISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH----YGCMVDLLGRAGYIKEAYNL 453
Query: 364 FETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
++M R+ + + S++ +H A R++ + L+P + LL
Sbjct: 454 IKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFK--LDPSNCGYYVLL 503
>gi|297819260|ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
gi|297323351|gb|EFH53772.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
lyrata]
Length = 657
Score = 281 bits (718), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 173/520 (33%), Positives = 278/520 (53%), Gaps = 21/520 (4%)
Query: 48 YALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDA--KSLFKN--------LLR 97
Y N LP + + K P SV L N I + A A N+ +SL K +L
Sbjct: 14 YYTVNFLPRSPL---KPPLCSVALNNLSISSGAGAKISNNQLIQSLCKEGKLKQALRVLS 70
Query: 98 TQLKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ P TY + C S L GLR VH + +G +D ++ L+ YS L +D
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDGLR-VHRHILDNGSDQDPFLATKLIGMYSDLGSVD 129
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT----LVGLI 212
A KVFD + + N++ G ++ L L+ M R+G D +T L +
Sbjct: 130 YARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACV 189
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+ L+ G+ IH + ++S+ Y+ + LV MYAR C++ A +VFN + ++V
Sbjct: 190 ASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVV 249
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVIHG 330
+WSA+I Y++ G +AL FR++ + K + P V + SVL A A A + G +IHG
Sbjct: 250 SWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHG 309
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
Y+++ G + + V SALV MY +CG L +G +VF+ M +R+++++NS+I G+HG+ +
Sbjct: 310 YILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRK 369
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A + F +++ G +P TF ++L AC H GLV +G+ +F M ++GI+ + EHY MV
Sbjct: 370 AIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMV 429
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
LLG A L+EA + + P V G+LL C I+GN +LAE + +LF +P+
Sbjct: 430 DLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAG 489
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L++ YAE WD+V +++ + GL+K G W+
Sbjct: 490 NYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 203/432 (46%), Gaps = 12/432 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SLS +H + +DPF ATKL+ +Y+ + AR +FDKT +R++++WN++ R
Sbjct: 92 SLSDGLRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A LA + L+ + R ++ D FTY + +AC S+ G I + L R
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA-SECTADHLTKGKEIHAHLTR 210
Query: 138 DSITS-----SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
S + LV Y++ +D A VF+G+ ++V ++MI+ +A G ++L+
Sbjct: 211 RGYNSHVYIMTTLVDMYARFGCVDYASYVFNGMPVRNVVSWSAMIACYAKNGKAFEALRT 270
Query: 193 FDWMLRLGK--TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
F M+ K +P+ T+V ++ + L G+ IHG+ L+ DS V S LV+MY
Sbjct: 271 FREMMTETKDSSPNSVTMVSVLQACASLAALEQGRLIHGYILRRGLDSILPVISALVTMY 330
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
RC ++ VF+ + D+V+W++LI+ Y G KA+ F ++ G PV
Sbjct: 331 GRCGKLDVGQRVFDRMHDRDVVSWNSLISSYGVHGYGRKAIQIFEEMLANGASPTPVTFV 390
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM-S 368
SVL A + V G + + + HG + V + +VD+ + L ++ + M +
Sbjct: 391 SVLGACSHEGLVEEGKRLFESMWRDHGIKPQVEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E + S++ +HG A R + L P + LL + D +
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRLF--ALEPKNAGNYVLLADIYAEAQMWDEVK 508
Query: 429 IFTRMTEEYGIQ 440
++ E G+Q
Sbjct: 509 RVKKLLEHRGLQ 520
>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Vitis vinifera]
Length = 825
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 166/530 (31%), Positives = 275/530 (51%), Gaps = 7/530 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA V + D L+ Y N + + R LFD+ +++ W ++I Y +
Sbjct: 250 KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGY-MQ 308
Query: 83 HRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ F+ +A LF + R KPD F + +C L R VH I + L D
Sbjct: 309 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFV 368
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L+ Y+K +L+ +A KVFD +++ +++ N+MI G++ ++L+LF M
Sbjct: 369 KNGLIDMYAKSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 428
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P T V L+ L + + IHG +K + S L+ +Y++C+ + A H
Sbjct: 429 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARH 488
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF + D+V W+A+ GY+Q + +AL + L +K + A+++ AA+ A+
Sbjct: 489 VFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 548
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G H +++ G + V++ALVDMY+KCG + ++F + R+++ +NS+I
Sbjct: 549 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 608
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG +A FR+++++G+ P+ TF A+L AC H G V DG F M +GI+
Sbjct: 609 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMP-GFGIKP 667
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA--VSGALLSCCHIYGNSDLAEIVAH 499
TEHY +V LLG +G L EA FI + P++PA V +LLS C I GN +L + A
Sbjct: 668 GTEHYACVVSLLGRSGKLFEAKEFIEKM--PIEPAAIVWRSLLSACRIAGNVELGKYAAE 725
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP+ ++LSN +A G W DV K+RD + + + KE G SW+
Sbjct: 726 MAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWI 775
Score = 199 bits (507), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 212/417 (50%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ + +LH V ++ +D + T L+ Y+ N + AR++FD+ +++ W +II
Sbjct: 145 VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAG 204
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y R + LF + T + PD + + + ACS L G + +H + G D
Sbjct: 205 YTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 264
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ L+ Y+K + + K+FD + +++ +MISG+ F ++++LF M R
Sbjct: 265 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 324
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
LG PD + +++ L G+ +H + +K++ +S ++V + L+ MYA+ N +
Sbjct: 325 LGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLID 384
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + ++++++A+I GYS Q +AL F ++ ++ + S+L +A
Sbjct: 385 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSAS 444
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ IHG +I+ G L + SAL+D+YSKC Y+ VFE M+E++I+ +N++
Sbjct: 445 LFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAM 504
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
G H +A + + + P+E TF+AL+ A + + G++ ++ +
Sbjct: 505 FFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVK 561
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 116/407 (28%), Positives = 207/407 (50%), Gaps = 1/407 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+LS S + K +H + + L D F A L+ + + ++ + +AR++FDK P ++
Sbjct: 33 LLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMPHKN 92
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVH 127
+ W+S++ Y+ +A +F +L R + P+ F A + RAC++ + +H
Sbjct: 93 LITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLH 152
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + SG +D ++L+ YSK I+EA VFD +S+ V ++I+G+ CG
Sbjct: 153 GFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTIIAGYTKCGRSA 212
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
SL+LF M PD Y + ++S L G+ IH + L+ + V +VL+
Sbjct: 213 VSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLI 272
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
Y +CN + + +F+ + ++++W+ +I+GY Q +A+ F ++N G K D
Sbjct: 273 DFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGF 332
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SVL + + G +H Y I+ E V + L+DMY+K L +VF+ M
Sbjct: 333 ACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYAKSNLLIDAKKVFDVM 392
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+E+N+I+YN++I G +A E F ++ + P TF +LL
Sbjct: 393 AEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLL 439
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 181/346 (52%), Gaps = 6/346 (1%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L+P +A + + + + + +HG IVSGL D+ ++ L+ SK +D A
Sbjct: 23 LRPKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNAR 82
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF-DWMLRLGKTPDEYTLVGLISGLWEP 218
VFD + +L+ +SM+S ++ G+ +++L +F D + G+ P+E+ L +I +
Sbjct: 83 VVFDKMPHKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQL 142
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
++ G +HGF ++S FD YV + L+ Y++ + A VF+ L VTW+ +I
Sbjct: 143 GVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEARLVFDQLSEKTAVTWTTII 202
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GY++ G +L F ++ D +++SVL+A + + G IH YV++ G E
Sbjct: 203 AGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTE 262
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ V V + L+D Y+KC + G ++F+ M +NII++ ++I G + F ++A + F ++
Sbjct: 263 MDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEM 322
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G PD +++L +C + GR++ Y I+A E
Sbjct: 323 NRLGWKPDGFACTSVLTSCGSREALEQGRQVHA-----YTIKANLE 363
>gi|222636858|gb|EEE66990.1| hypothetical protein OsJ_23896 [Oryza sativa Japonica Group]
Length = 659
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 254/472 (53%), Gaps = 14/472 (2%)
Query: 92 FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
++ + + + PD FTY + RAC+E +L R VH A +G+ + +AL++ Y+K
Sbjct: 138 YQEMGKNGVLPDVFTYPSVLRACAEARELVLGRAVHMHAAGAGMDGNLFFQNALMSMYAK 197
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-------- 203
+ A KVFDG+ D+V NSMIS +A G W ++++LF M G P
Sbjct: 198 CGDLASARKVFDGMVQRDVVSWNSMISSYAAVGQWAEAMELFRRMRDEGTEPVGLIREMV 257
Query: 204 ------DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
D TLV ++ L +G+ IHG ++ D + VS+ L++MYARC M
Sbjct: 258 RGGAEVDYVTLVIGLNACSRVGWLRLGKEIHGLAVRMCCDQVESVSNALITMYARCKDME 317
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F L P +VTW+ +++ ++ +A FR++ +G K + V + + LA A
Sbjct: 318 CARMLFRMLECPGVVTWNTMLSSFALSDCAEEASSIFREMICRGVKPNYVTVVTYLALCA 377
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ AN+ G +HG++++HGF+ ++ ++L+DMYSK G L + VF+TM + ++I+Y S
Sbjct: 378 RVANLQHGQELHGHIVKHGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDCDMISYTS 437
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G G+ G A F +I+ G+ PD +L AC H GLV +G E+F +M Y
Sbjct: 438 MIAGYGMQGKGTVALRLFEQMIDSGIKPDHIIMVTVLSACSHSGLVLEGEELFNKMVISY 497
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI+ + EHY M+ L AG LE+A + P P + AL+ CH GN ++ E
Sbjct: 498 GIKPQMEHYSCMIDLYARAGLLEKAEEMLDHTPFPPTSTMWAALVGACHDRGNIEIGERA 557
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +L E + V+++N YA G WD++ +R + D G+ K G++W
Sbjct: 558 ARKLLEMRTENAGHYVLIANMYAAAGCWDELATVRKLMRDLGVTKAPGLAWT 609
>gi|357130409|ref|XP_003566841.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Brachypodium distachyon]
Length = 815
Score = 281 bits (718), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 270/527 (51%), Gaps = 1/527 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +HA V K L D + LV +Y+ A +F + + V +++I +
Sbjct: 272 QSVHASVIKRGLETDNVLNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRH 331
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF + +KP+++ + I S D R VH + SG
Sbjct: 332 DMAWEALDLFVKMSGMGVKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVG 391
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
A++ Y K+ + +A FD + +PD N+++S F ++ L++F M G +
Sbjct: 392 DAILNMYVKVGAVQDATVTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFS 451
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
++YT V ++ L G +H LKS + VS +LV MYA+ C SA V
Sbjct: 452 ANKYTYVSVLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLV 511
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F L D +W+ +++GY++ + K + YFR + + + +A L+ + A++
Sbjct: 512 FEQLKERDAFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASL 571
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + I+ G+ SV VS ALVDMY KCG + +F R+ + +N++I G
Sbjct: 572 GSGLQLHSWAIKSGWNSSV-VSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGY 630
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG Y+A + F+ ++++G PD TF +L AC H GL+N+GR+ F ++ YGI
Sbjct: 631 SQHGHGYKALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGRKYFKSLSSIYGITPT 690
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV +L AG L EA S I +P D ++ +L C I+ N ++AE A +LF
Sbjct: 691 MEHYACMVDILSKAGRLVEAESLINQMPLAPDSSIWRTILGACRIHRNIEIAERAAERLF 750
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E +P + ++LSN YA+ GRW DV ++R+ ++D+G++KE G SW+
Sbjct: 751 ELEPHDASSSILLSNIYADLGRWSDVTRVRNILLDHGVKKEPGCSWI 797
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 118/478 (24%), Positives = 228/478 (47%), Gaps = 13/478 (2%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
LH L+ ++L R +ELHA + +++L D F L+ +Y L AR +FD
Sbjct: 50 LRLHAAALQDCAVRRTLRRGQELHARLLRSALHPDTFLLDSLLNMYCKCGRLVDARRVFD 109
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
P R + W ++I A+ A + A +F + + + P+ FT A + +ACS S
Sbjct: 110 GMPHRDIVAWTAMISAHTAAGDSDQALDMFARMNQEGIAPNGFTLASVLKACSGGSHSKF 169
Query: 123 LRFVHGGAI-VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
VHG + ++GL D S+LV AY+ +D A V G+ + V N++++G+A
Sbjct: 170 THQVHGQVVKLNGLD-DPYVGSSLVEAYTSCGELDAAETVLLGLPERSDVSWNALLNGYA 228
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G + + + + + ++ G +YTL ++ E L GQ +H +K ++ +
Sbjct: 229 RHGDYRRVMIIIEKLVASGDEISKYTLPTVLKCCMELGLAKYGQSVHASVIKRGLETDNV 288
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
++S LV MY+RC AY VF + PD+V SA+I+ + + +AL F K++ G
Sbjct: 289 LNSCLVEMYSRCLSAEEAYEVFIRIDEPDVVHCSAMISCFDRHDMAWEALDLFVKMSGMG 348
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
K + + + A+++ + +H Y+++ GF + V A+++MY K G +
Sbjct: 349 VKPNHYIFVGIAGVASRTGDANLCRSVHAYIVKSGFAMLKGVGDAILNMYVKVGAVQDAT 408
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
F+ + E + ++N+++ Q F+ + +G + ++ T+ ++L C
Sbjct: 409 VTFDLIHEPDTFSWNTILSAFYSGSNCEQGLRIFKQMACEGFSANKYTYVSVLRCCTSLM 468
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG----------NLEEAYSFIWSL 469
+ G ++ + + G+Q T+ +V + +G L+E +F W++
Sbjct: 469 NLRFGTQVHACILKS-GLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERDAFSWTV 525
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 1/217 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L ++HA + K+ L D + LV +YA + SA ++F++ +R
Sbjct: 460 VLRCCTSLMNLRFGTQVHACILKSGLQNDTDVSRMLVDMYAQSGCFTSACLVFEQLKERD 519
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
F W I+ YA F+++LR ++P + T A CS+ + L +H
Sbjct: 520 AFSWTVIMSGYAKTEEAEKVVEYFRSMLRENIRPSDATLAVSLSVCSDMASLGSGLQLHS 579
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI SG S+ S ALV Y K I +A +F D V N++I G++ G K
Sbjct: 580 WAIKSGWN-SSVVSGALVDMYVKCGNIADAEMLFHESETRDQVAWNTIICGYSQHGHGYK 638
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+L F M+ GK PD T VG++S LL+ G+
Sbjct: 639 ALDAFKQMVDEGKRPDGITFVGVLSACSHAGLLNEGR 675
>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 839
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/501 (32%), Positives = 267/501 (53%), Gaps = 4/501 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLF-KNLLRTQLKPDNFTYACITR 112
L SAR +FDK +++V W +I A ++A LF + L+ + PD FT +
Sbjct: 211 LESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLIS 270
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
C+E L + +H I SGL D +LV Y+K L+ EA KVFDG+ + +++
Sbjct: 271 VCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMS 330
Query: 173 CNSMISGFAHCG--FWDKSLQLF-DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
++++G+ G + +++++F + +L+ G P+ +T G++ G+ +HG
Sbjct: 331 WTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHG 390
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+K + D V + LVS+YA+ M SA F+ LF +LV+ + + + +
Sbjct: 391 QTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNS 450
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
R++ G AS+L+ AA + G IH V++ GF + V++AL+
Sbjct: 451 EQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALIS 510
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MYSKCG +QVF M + N+IT+ S+I G HGF +A E F +++E G+ P++ T
Sbjct: 511 MYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVT 570
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
+ A+L AC H GL+++ + FT M + +GI + EHY MV LLG +G L EA FI S+
Sbjct: 571 YIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSM 630
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P D V L C ++ N+ L E A + E +P A ++LSN YA +GRW+DV
Sbjct: 631 PFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVA 690
Query: 530 KLRDDIVDNGLRKEAGVSWVS 550
+R ++ + KEAG SW+
Sbjct: 691 AIRKNMKQKQITKEAGSSWIE 711
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 180/353 (50%), Gaps = 18/353 (5%)
Query: 83 HRFNDAKSLFK-----NLLRTQLKPDN--FTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ FN+ + L K NL T+ +N T + + + C + + +H S L
Sbjct: 24 NHFNNPQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNL 83
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLF 193
D++ ++L+T YSK + A +F + S D+V +S+IS FA+ K++++F
Sbjct: 84 PLDTLLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMF 143
Query: 194 DWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS-FDSYDYVSSVLVSMYA 251
D +L + G P+EY +I + G + GF LK+ FDS+ V L+ M+
Sbjct: 144 DQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFV 203
Query: 252 R-CNC--MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL-YYFRKLNMQGKKADPV 307
+ C+ + SA VF+ + ++VTW+ +IT +Q G +A+ + L G D
Sbjct: 204 KGCSLADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRF 263
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ +++ A+ + G +H +VI+ G L + V +LVDMY+KCG + +VF+ M
Sbjct: 264 TLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGM 323
Query: 368 SERNIITYNSVILGL--GLHGFTYQAFEFFRD-IIEKGLNPDESTFSALLCAC 417
E N++++ +++ G G G+ +A F + +++ G+ P+ TFS +L AC
Sbjct: 324 REHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKAC 376
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 170/357 (47%), Gaps = 8/357 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q LS KELH+ V ++ L+ D LV +YA ++ AR +FD + +V W +++
Sbjct: 276 QFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGLVQEARKVFDGMREHNVMSWTALV 335
Query: 77 RAYAL--AHRFNDAKSLFKN-LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
Y +A +F N LL+ + P+ FT++ + +AC+ D VHG I
Sbjct: 336 NGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKL 395
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL + LV+ Y+K ++ A K FD + + +LV +++ F S Q
Sbjct: 396 GLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLV-SETVVDDTNVKDFNLNSEQDL 454
Query: 194 DWMLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
D + +G +T L+SG + G+ IH +K F + V++ L+SMY++
Sbjct: 455 DREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSK 514
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C +A VFN + +++TW+++I G+++ G KAL F + G K + V +V
Sbjct: 515 CGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAV 574
Query: 313 LAAAAKSANVWPGAVIHGYVIQ--HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
L+A + + A H ++ HG + + +VD+ + G L I+ +M
Sbjct: 575 LSACSH-VGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSM 630
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 134/313 (42%), Gaps = 22/313 (7%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H K L LV +YA + + SAR FD ++++ +
Sbjct: 386 EQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKD 445
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
N + L + + +FTYA + + + +H + G D +
Sbjct: 446 FNLNSEQDLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVN 505
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL++ YSK + A++VF+ + D +++ S+I+GFA GF K+L+LF ML G
Sbjct: 506 NALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVK 565
Query: 203 PDEYTL---------VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
P++ T VGLI W+ + + HG + + Y + +V + R
Sbjct: 566 PNDVTYIAVLSACSHVGLIDEAWKH--FTSMRDNHGIVPR--MEHY----ACMVDLLGRS 617
Query: 254 NCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP---VLI 309
++ A NS+ F D + W + G + K + K+ ++ + DP +L+
Sbjct: 618 GLLSEAIEFINSMPFDADALVWRTFL-GSCRVHRNTKLGEHAAKMILEREPHDPATYILL 676
Query: 310 ASVLAAAAKSANV 322
+++ A + +V
Sbjct: 677 SNLYATEGRWEDV 689
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 63/122 (51%), Gaps = 3/122 (2%)
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM--SE 369
+L ++ N G ++H + L ++ ++L+ +YSK +F++M S+
Sbjct: 58 LLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQSMENSK 117
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHGGLVNDGRE 428
R++++Y+S+I + +A E F ++ + G+ P+E F+A++ AC GG G
Sbjct: 118 RDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFFKTGLC 177
Query: 429 IF 430
+F
Sbjct: 178 LF 179
>gi|357156964|ref|XP_003577636.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Brachypodium distachyon]
Length = 710
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 286/534 (53%), Gaps = 5/534 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA + +P +AT L+ + A + L AR +FD P R V++WN+++R +A +H
Sbjct: 171 IHARAVVLGIATNPAFATSLLAVAAPCS-LAYARRVFDAAPHRDVYMWNTLLRVHAHSHA 229
Query: 85 F--NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A SL+K + + PD++TY + AC+ R HG A+ L D
Sbjct: 230 EPQSSALSLYKRMRAAGVAPDHYTYPIVLPACAAARAPRLGRAAHGDAVRFALAGDCFVH 289
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPD--LVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
SAL+ Y + + +A +VF G + +V +M++G+ F+ +++ +F ++ G
Sbjct: 290 SALIAMYCQDGDVADAEQVFLGTAGASRTVVSWTAMVAGYVQNCFFGEAIAVFGAVVAEG 349
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+E TL+ + L L+ G+ +HGF LK FD+ + + LV+MY +C + SA
Sbjct: 350 VLPNEITLISFLPCLQGQEWLTAGEMVHGFALKLRFDANVPLLNALVAMYGKCGSVLSAK 409
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F+ + LV+W+ ++ Y Q D +A+ +FR++ + D V + SVL+A A+S
Sbjct: 410 GLFDGMATRTLVSWNTMVAMYEQNSDGVQAIKFFRRMLTEKVGFDCVTLVSVLSACARSG 469
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G +H HG + + + LVDMY+KCG + +VF+++ E +++++++I
Sbjct: 470 ALETGKWVHELARSHGLDNDARIGNVLVDMYAKCGEIAYAREVFDSLREPGVVSWSAMIS 529
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
HG +A + F + +G+ P+ T +A+L AC H GLV++G + F + EY +
Sbjct: 530 AYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLVACGHSGLVDEGLKHFNSIAMEYQMS 589
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY M+ +LG AG L EAY I + D V GA L C ++ N +LAE VA+
Sbjct: 590 PTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDKCVWGAFLGGCRLHCNLELAEFVAND 649
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
LF++ + V+++N Y E G +D ++R + + L+K AG S V +S
Sbjct: 650 LFQSGSNDVTFYVLMANMYFEAGMLEDAERMRRAMKEMELKKTAGHSSVVRTST 703
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 3/180 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L K +H L L D LV +YA + AR +FD +
Sbjct: 461 VLSACARSGALETGKWVHELARSHGLDNDARIGNVLVDMYAKCGEIAYAREVFDSLREPG 520
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
V W+++I AYA +A LF + +KP++FT + AC + + GL+ +
Sbjct: 521 VVSWSAMISAYANHGEHQEALKLFSLMKGEGVKPNSFTVTAVLVACGHSGLVDEGLKHFN 580
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFA-HCGF 185
A+ + + ++ + + EA ++ G+S PD + + + G HC
Sbjct: 581 SIAMEYQMSPTLEHYACMLDMLGRAGRLVEAYEIIRGMSVQPDKCVWGAFLGGCRLHCNL 640
>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
Length = 736
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 286/542 (52%), Gaps = 9/542 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
S + L + + LHA++ + LL D T L+ +YA L AR FD+ ++++ WN
Sbjct: 70 SSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQ---LKPDNFTYACITRACSENSDLPGLRFVHGGA 130
++I Y+ A ++++++ +KPD T++ ACS D+ R +
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEART 189
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ SG DSI +AL+ YSK ++ A KVFD + + D++ N+MISG+A G ++L
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+LF M P+ T +GL++ L G+ IH + ++S + +VL++MY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMY 309
Query: 251 ARCNC-MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
+C+ + A VF L D++TW+ LI Y Q G AL F+++ ++ + + +
Sbjct: 310 TKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
++VL+A A G +H + + V++ ++L++MY++CG L + VF + +
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++++++++I HG + E F +++++GL D+ T + L AC HGG++ +G +
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQS 489
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M ++G+ H++ MV LL AG LE A + I +P D +LLS C ++
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549
Query: 490 NSDLAEIVAHQLFENDPRKGAYKV-MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
++ A VA +LFE + V +LSN YAE GRWDDV K R+ RK G S+
Sbjct: 550 DTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RRAARKNPGCSY 606
Query: 549 VS 550
+
Sbjct: 607 IE 608
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 184/363 (50%), Gaps = 5/363 (1%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
W I+ A+A + +A ++ ++ L+PD + CS + DL + +H +
Sbjct: 26 WTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMIL 85
Query: 132 VSGLGR-DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ L D I +AL+T Y++ ++ A K FD + LV N++I+G++ G +L
Sbjct: 86 ETQLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGAL 145
Query: 191 QLFDWMLRL---GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ M+ G PD T + +S G+ I + S + S V + L+
Sbjct: 146 KIYQDMVSKSPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALI 205
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MY++C + SA VF+ L + D++ W+ +I+GY++QG +AL F+++ K + V
Sbjct: 206 NMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVV 265
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC-GYLGLGIQVFET 366
+L A ++ G IH V +HG+E +++ + L++MY+KC L QVFE
Sbjct: 266 TFIGLLTACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCSSSLEEARQVFER 325
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ R++IT+N +I+ +G A + F+ + + + P+E T S +L AC G G
Sbjct: 326 LRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385
Query: 427 REI 429
+ +
Sbjct: 386 KAV 388
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + A VF+++ HP+ V+W+ ++ +++ G Y +AL Y+R++ ++G + D +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ + S ++ G ++H +++ E +++ +AL+ MY++C L L + F+ M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK---GLNPDESTFSALLCACCHGGLVN 424
++ ++T+N++I G +G A + ++D++ K G+ PD TFS+ L AC G ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGDIS 180
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
GREI R T G + + ++ + G+LE A ++ K D ++S
Sbjct: 181 QGREIEAR-TVASGYASDSIVQNALINMYSKCGSLESARK-VFDRLKNRDVIAWNTMISG 238
Query: 485 CHIYGNSDLAEIVAHQLFENDPR 507
G + A + ++ NDP+
Sbjct: 239 YAKQGAATQALELFQRMGPNDPK 261
>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g08820
gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 685
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 271/533 (50%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+++ K++H + L D F L++ + +LF T ++FL+NS+I
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ H F++ LF ++ + L FT+ + +AC+ S +H + G
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D ++L++ YS +++A K+FD + D +V ++ SG+ G +++ LF M+
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMV 204
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+G PD Y +V ++S L G+ I + + +V + LV++YA+C M
Sbjct: 205 EMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+S+ D+VTWS +I GY+ + + F ++ + K D I L++ A
Sbjct: 265 KARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G + +H F ++ +++AL+DMY+KCG + G +VF+ M E++I+ N+
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
I GL +G +F F + G++PD STF LLC C H GL+ DG F ++ Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
++ EHY MV L G AG L++AY I +P + V GALLS C + ++ LAE V
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L +P V LSN Y+ GRWD+ ++RD + G++K G SW+
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIE 557
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 179/394 (45%), Gaps = 2/394 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
LVL+ S +LH+LV K D T L+ +Y+ + L A LFD+ P R
Sbjct: 116 LVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDR 175
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
SV W ++ Y + R +A LFK ++ +KPD++ + AC DL ++
Sbjct: 176 SVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIV 235
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ ++S + LV Y+K +++A VFD + + D+V ++MI G+A F
Sbjct: 236 KYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPK 295
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ ++LF ML+ PD++++VG +S L +G+ + F + ++++ L+
Sbjct: 296 EGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALI 355
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MYA+C M + VF + D+V +A I+G ++ G + F + G D
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGS 415
Query: 308 LIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+L + + G + + + +V +VD++ + G L ++
Sbjct: 416 TFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICD 475
Query: 367 MSER-NIITYNSVILGLGLHGFTYQAFEFFRDII 399
M R N I + +++ G L T A +++I
Sbjct: 476 MPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509
>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 681
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 176/551 (31%), Positives = 284/551 (51%), Gaps = 25/551 (4%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA---LNNVLPSARIL 60
NLHF + ++ +LHAL K + L P +++L+ LYA +NN L A L
Sbjct: 17 NLHFPLQNCGTEREA----NQLHALSIKTASLNHPSVSSRLLALYADPRINN-LQYAHSL 71
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FD + ++ WN +I+ Y R NDA +LF LL PD+FT C+ + C+ L
Sbjct: 72 FDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGAL 130
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+ +HG + G G D S+LV+ YSK I+ KVFD + D D+V NS+I G+
Sbjct: 131 QEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKVFDRMEDKDVVSWNSLIDGY 190
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
A CG + +L++F+ M D ++ LI GL + L + + FD
Sbjct: 191 ARCGEIELALEMFEEM----PEKDSFSWTILIDGLSKSGKLEAARDV--------FDRMP 238
Query: 241 YVSSV----LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+SV +++ Y + N+A +F+ + LVTW+++ITGY + + KAL F
Sbjct: 239 IRNSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFTKALKLFEV 298
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ + + I ++AA+ ++ G +H Y+++ GF+ ++ + L++MYSKCG
Sbjct: 299 MLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGS 358
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ ++VF ++ ++ + + SVI+GLG+HG Q E F ++ GL P TF +L A
Sbjct: 359 VKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNA 418
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C H G D F MT +YGI+ EHY ++ +L AG+LEEA I +P +
Sbjct: 419 CSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIERMPIKANKV 478
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
+ +LLS +GN + E A L + P V+LSN YA G W+ V ++R+ +
Sbjct: 479 IWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKVRQVREMMK 538
Query: 537 DNGLRKEAGVS 547
G++K+ G S
Sbjct: 539 KKGMKKDPGCS 549
>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Vitis vinifera]
Length = 755
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/530 (30%), Positives = 271/530 (51%), Gaps = 2/530 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHA V K+ L+ +Y +N++ A +F + R + W S+I ++
Sbjct: 184 RQLHAHVLKSEFGAHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQL 243
Query: 83 HRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+A FK +L + P+ F + + ACS R +HG +I GLGRD
Sbjct: 244 GYELEALCYFKEMLHQGVYLPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFA 303
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+L Y+K L+ A VF + PDLV N++I+GFA+ G +++ F M G
Sbjct: 304 GCSLCDMYAKCGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGL 363
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PDE T+ L+ PS L G +HG+ K D V + L++MYA+C+ + A
Sbjct: 364 IPDEITVRSLLCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIF 423
Query: 262 VFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
F + + DLV+W+A++T + + + + + + D + + +VL A+A++
Sbjct: 424 FFEEMRCNADLVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETV 483
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G +H Y ++ G V++ L+D+Y+KCG L ++F++M ++++++S+IL
Sbjct: 484 SIEIGNQVHCYALKTGLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLIL 543
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G+ +A + F+ + + P+ TF +L AC H GLV +G +++ M +E+GI
Sbjct: 544 GYAQFGYGEEALKLFKTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIA 603
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EH MV LL AG L EA FI + D V LL+ C +GN D+ + A
Sbjct: 604 PTREHCSCMVDLLARAGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAEN 663
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ + DP A V+L N YA G W+DV +LR + G+RK G SW+
Sbjct: 664 ILKIDPSNSAAHVLLCNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIE 713
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/461 (27%), Positives = 226/461 (49%), Gaps = 9/461 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL K++H + K+ D ++ +Y L A+ +FD P+R+V W S+I
Sbjct: 77 RSLEHGKKIHDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVI 136
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + +A + +L++ + PD FT+ I +ACS D+ R +H + S G
Sbjct: 137 AGYSQNGQGGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFG 196
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
I +AL++ Y+K +LI +A+ VF ++ DL+ SMI+GF+ G+ ++L F M
Sbjct: 197 AHIIAQNALISMYTKSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEM 256
Query: 197 LRLGK-TPDEY---TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
L G P+E+ ++ S L +P G+ +HG +K + L MYA+
Sbjct: 257 LHQGVYLPNEFIFGSVFSACSSLLQPEY---GRQLHGMSIKFGLGRDVFAGCSLCDMYAK 313
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C ++ A VF + PDLV W+A+I G++ GD +A+ +F ++ QG D + + S+
Sbjct: 314 CGLLSCARVVFYQIGRPDLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSL 373
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERN 371
L A + ++ G +HGY+ + G +L V V + L+ MY+KC L I FE M +
Sbjct: 374 LCACTSPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNAD 433
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++++N+++ H + F + + PD T + +L A + G ++
Sbjct: 434 LVSWNAILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHC 493
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+ G+ T ++ L G+L+ A+ S+ P
Sbjct: 494 YALKT-GLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINP 533
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/359 (28%), Positives = 175/359 (48%), Gaps = 2/359 (0%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
N I + FN+A F+ L + T TYA + ACS L + +H +
Sbjct: 31 NEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKIHDHML 90
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
S D + ++ Y K + +A KVFD + + ++V S+I+G++ G +L+
Sbjct: 91 KSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAMPERNVVSWTSVIAGYSQNGQGGNALE 150
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
+ ML+ G PD++T +I + +G+ +H LKS F ++ + L+SMY
Sbjct: 151 FYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLKSEFGAHIIAQNALISMYT 210
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK-ADPVLIA 310
+ N + A VF+ + DL++W ++I G+SQ G +AL YF+++ QG + +
Sbjct: 211 KSNLIIDALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVYLPNEFIFG 270
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SV +A + G +HG I+ G V +L DMY+KCG L VF +
Sbjct: 271 SVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKCGLLSCARVVFYQIGRP 330
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++ +N++I G G +A FF + +GL PDE T +LLCAC + G ++
Sbjct: 331 DLVAWNAIIAGFAYGGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACTSPSELYQGMQV 389
>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
Length = 989
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/541 (30%), Positives = 271/541 (50%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S+ +L + ++LH+ V KA + D L+ LY + + +A +F +
Sbjct: 320 LLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQTEN 379
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V LWN ++ A+ +++ +F+ + L P+ FTY I R C+ L +H
Sbjct: 380 VVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDLGEQIHT 439
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I +G + S L+ Y+K +D A + +++ D+V ++ISG+A + +
Sbjct: 440 QVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTEDDVVSWTALISGYAQHNLFAE 499
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+ F ML G D IS L+ G+ IH S + + + LVS
Sbjct: 500 ALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQSYVSGYSEDLSIGNALVS 559
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+YARC + AY F + D ++W+ LI+G++Q G AL F ++N +A
Sbjct: 560 LYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDALKVFAQMNRAKLEASFFT 619
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
S ++AAA AN+ G IH +I+ GF+ + VS+AL+ Y+KCG + + F M
Sbjct: 620 FGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFYAKCGSIEDARREFCEMP 679
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E+N +++N++I G HG+ +A F + + G P+ TF +L AC H GLV G
Sbjct: 680 EKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFVGVLSACSHVGLVTKGLG 739
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M++E+G+ K HY +V L+ AG L A FI +P D + LLS C ++
Sbjct: 740 YFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPIEPDATIWRTLLSACTVH 799
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N ++ E A L E +P A V+LSN YA G+WD + R + + G++KE G SW
Sbjct: 800 KNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQTRQMMRNRGVKKEPGRSW 859
Query: 549 V 549
+
Sbjct: 860 I 860
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 142/479 (29%), Positives = 235/479 (49%), Gaps = 9/479 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + SL K+LH + K + KLV +Y L +F+ P RS
Sbjct: 16 LLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDMPNRS 75
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF--- 125
V W+ II + N LF ++ + P ++A + RACS + G+R+
Sbjct: 76 VRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHR--IGIRYAEQ 133
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I GL I S+ L+ Y+K LI A KVFD + D V +MISGF+ G+
Sbjct: 134 IHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGY 193
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++++ LF M G P Y ++SG + L VG+ +H K YV +
Sbjct: 194 EEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNA 253
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV++Y+R SA VF+ + D V++++LI+G +QQG AL F K+ K D
Sbjct: 254 LVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPD 313
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V +AS+L+A A + + G +H YVI+ G ++V AL+D+Y C + ++F
Sbjct: 314 CVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFL 373
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
T N++ +N +++ G ++F FR + KGL P++ T+ ++L C G ++
Sbjct: 374 TAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGALDL 433
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLS 483
G +I T++ + G Q ++ + G L+ A+ + +L + D VS AL+S
Sbjct: 434 GEQIHTQVIKT-GFQFNVYVCSVLIDMYAKHGKLDTAHVILRTLTE--DDVVSWTALIS 489
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/488 (26%), Positives = 227/488 (46%), Gaps = 8/488 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHALV K + + LV LY+ SA +F K + +NS+I A
Sbjct: 233 EQLHALVFKYGSSLETYVCNALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQ 292
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A LF + R LKPD T A + AC+ N L +H I +G+ D I
Sbjct: 293 GFSDGALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVE 352
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
AL+ Y S I A ++F ++VL N M+ F +S ++F M G
Sbjct: 353 GALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLI 412
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+++T ++ L +G+ IH +K+ F YV SVL+ MYA+ +++A+ +
Sbjct: 413 PNQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVI 472
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+L D+V+W+ALI+GY+Q + +AL +F+++ +G ++D + +S ++A A +
Sbjct: 473 LRTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQAL 532
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH G+ + + +ALV +Y++CG + FE + ++ I++N +I G
Sbjct: 533 NQGRQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGF 592
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+ A + F + L TF + + A + + G++I M + G +
Sbjct: 593 AQSGYCEDALKVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHA-MIIKRGFDSD 651
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS-CCHIYGNSDLAEIVAHQL 501
E ++ G++E+A +P+ D + + + H YGN A L
Sbjct: 652 IEVSNALITFYAKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNE------AVNL 705
Query: 502 FENDPRKG 509
FE + G
Sbjct: 706 FEKMKQVG 713
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 117/480 (24%), Positives = 211/480 (43%), Gaps = 40/480 (8%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
TY + C + L + +HG + G G +S+ + LV Y L +D +KVF+ +
Sbjct: 12 TYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGDLDGVVKVFEDM 71
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL-LSVG 224
+ + + +ISGF ++ L LF M+ +P E + ++ + +
Sbjct: 72 PNRSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYA 131
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ IH + +S+ L+ +YA+ + SA VF++L D V+W A+I+G+SQ
Sbjct: 132 EQIHARIICHGLLCSPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQN 191
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
G +A++ F +++ G P + +SVL+ K G +H V ++G L V
Sbjct: 192 GYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVC 251
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+ALV +YS+ +VF M ++ +++NS+I GL GF+ A E F + L
Sbjct: 252 NALVTLYSRMPNFVSAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLK 311
Query: 405 PDESTFSALLCACCHGGLVNDGREIFT---------------------------RMTEEY 437
PD T ++LL AC G + G ++ + + E
Sbjct: 312 PDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEM 371
Query: 438 GIQAKTEHYI---YMVKLLGLAGNLEEAYSFIWSLP-KPVDPA--VSGALLSCCHIYGNS 491
+ A+TE+ + M+ G NL E++ + K + P ++L C G
Sbjct: 372 FLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCTSVGAL 431
Query: 492 DLAEIVAHQLFENDPRKGAYKV-MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
DL E + Q+ + + Y +L + YA+ G+ D ++ L ++ VSW +
Sbjct: 432 DLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTA-----HVILRTLTEDDVVSWTA 486
>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
wallichii]
Length = 710
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/577 (28%), Positives = 297/577 (51%), Gaps = 36/577 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQ 66
L L + ++L + +HA + K L + +KL+ L+ + LP A +F+ +
Sbjct: 6 LSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQE 65
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
++ +WN++ R +AL+ A L+ ++ L P+ +T+ + ++C+++ + +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQI 125
Query: 127 HGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLI 155
HG + G RD ++ +AL+T Y+ I
Sbjct: 126 HGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYI 185
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A K+FD + D+V N+MISG+A G ++L+LF M++ PDE T+V ++S
Sbjct: 186 ASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSAC 245
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ + + +G+ +H + F S + + L+ +Y +C + +A +F L + D+++W+
Sbjct: 246 AQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWN 305
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
LI GY+ Y +AL F+++ G+ + V + S+L A A + G IH Y+ +
Sbjct: 306 TLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKR 365
Query: 336 --GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
G + ++L+DMY+KCG + QVF+++ R++ ++N++I G +HG AF+
Sbjct: 366 LKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFD 425
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F + + + PD+ TF LL AC H G+++ GR IF M E+Y I K EHY M+ LL
Sbjct: 426 IFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLL 485
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G +G +EA I ++ D + +LL C +Y N +L E A L + +P+ V
Sbjct: 486 GHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESYAQNLIKIEPKNPGSYV 545
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+LSN YA GRW++V K+R + D G++K G S +
Sbjct: 546 LLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIE 582
>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
Length = 825
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 274/525 (52%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K R+ F + L+ Y+L + AR +FD + W +++ Y+
Sbjct: 172 IHACACKLGHDRNAFVGSSLIDAYSLCGAVSHARCVFDGIIWKDAVTWTAMVSCYSENDI 231
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
DA + F + KP+ F + +A S + +HG A+ + + A
Sbjct: 232 PEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDTEPHVGGA 291
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K I++A VF+ + D++L + +IS +A +++ ++F M+R P+
Sbjct: 292 LLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQSYQNEQAFEMFLRMMRSSVVPN 351
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
E++L G++ + L +GQ IH +K ++S +V + L+ +YA+C M ++ +F
Sbjct: 352 EFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFR 411
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
SL + V+W+ +I GY Q G AL F+++ + V +SVL A A +A++
Sbjct: 412 SLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKH 471
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
IH + + F +V ++L+D Y+KCG + ++VFE++ + +++++N++I G L
Sbjct: 472 TVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYAL 531
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG A E F + + P++ TF ALL C GLVN G +F MT ++ I+ +
Sbjct: 532 HGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSMTMDHRIKPSMD 591
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY +V+LLG AG L +A FI +P P V ALLS C ++ N L + A ++ E
Sbjct: 592 HYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGKFSAEKVLEI 651
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P+ V+LSN YA G D V LR + + G++KE G+SWV
Sbjct: 652 EPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWV 696
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/396 (29%), Positives = 201/396 (50%), Gaps = 2/396 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F A L+ LYA L +AR LFD P+R++ + ++++ YAL F +A LF+ L
Sbjct: 83 DTFCANVLLNLYAKLGPLAAARRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQ 142
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLR-FVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R + ++F I + D PGL +H A G R++ S+L+ AYS +
Sbjct: 143 REGHEVNHFVLTTILKVLVA-MDAPGLTCCIHACACKLGHDRNAFVGSSLIDAYSLCGAV 201
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A VFDG+ D V +M+S ++ + +L F M G P+ + L ++
Sbjct: 202 SHARCVFDGIIWKDAVTWTAMVSCYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAA 261
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S +G+GIHG +K+ D+ +V L+ MYA+C + A VF + H D++ WS
Sbjct: 262 VCLSSAVLGKGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWS 321
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
LI+ Y+Q +A F ++ + ++ VL A A A + G IH VI+
Sbjct: 322 FLISRYAQSYQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKL 381
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G+E + V +AL+D+Y+KC + +++F ++ + N +++N++I+G GF A F
Sbjct: 382 GYESELFVGNALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVF 441
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+++ + + TFS++L AC + + +I +
Sbjct: 442 QEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHS 477
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 161/336 (47%), Gaps = 1/336 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H K +P L+ +YA + AR +F+ P V LW+ +I YA +
Sbjct: 271 KGIHGCAVKTLCDTEPHVGGALLDMYAKCGYIEDARTVFEIIPHDDVILWSFLISRYAQS 330
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++ A +F ++R+ + P+ F+ + + +AC+ + L + +H I G +
Sbjct: 331 YQNEQAFEMFLRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVG 390
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K ++ ++++F + D + V N++I G+ GF + +L +F M
Sbjct: 391 NALMDVYAKCRNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVL 450
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+ T ++ + + IH KS+F++ V + L+ YA+C C+ A V
Sbjct: 451 STQVTFSSVLRACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKV 510
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F S+ D+V+W+A+I+GY+ G AL F ++N K + V ++L+ + V
Sbjct: 511 FESIIQCDVVSWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLV 570
Query: 323 WPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G ++ + + H + S+ + +V + + G L
Sbjct: 571 NQGLSLFNSMTMDHRIKPSMDHYTCIVRLLGRAGRL 606
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + L +++H LV K + F L+ +YA + ++ +F +
Sbjct: 358 VLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKCRNMENSLEIFRSLRDAN 417
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN+II Y + DA S+F+ + + T++ + RAC+ + + +H
Sbjct: 418 EVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVLRACANTASIKHTVQIHS 477
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
S D+I ++L+ Y+K I +A+KVF+ + D+V N++ISG+A G
Sbjct: 478 LIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVVSWNAIISGYALHGRATD 537
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC-------LKSSFDSYDY 241
+L+LF+ M + P++ T V L+S L V QG+ F +K S D Y
Sbjct: 538 ALELFNRMNKSDTKPNDVTFVALLSVCGSTGL--VNQGLSLFNSMTMDHRIKPSMDHY-- 593
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
+ +V + R +N A + P + W AL++
Sbjct: 594 --TCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLS 630
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG--FELSVMVSSALVDMYSKCGYLGLG 360
K D A +L + G +H V+Q G +L ++ L+++Y+K G L
Sbjct: 44 KLDSYACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAA 103
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
++F+ M ERN++++ +++ G L G +A FR + +G + + +L
Sbjct: 104 RRLFDGMPERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTIL 157
>gi|359483391|ref|XP_003632946.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Vitis vinifera]
Length = 732
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 271/526 (51%), Gaps = 2/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA V + D A ++ +Y + A+ LF+ R V WNS++ YA
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ L + ++PD T+ + A + S L + VHG + +GL +DS ++
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K ++ A ++F+G+ D++ +MISG D ++ +F ML+ P
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+ +++ E +G +HG+ L+ + LV+MYA+C + + VF+
Sbjct: 348 TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFD 407
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+V+W+A+++G++Q G KAL F ++ ++ D + + S+L A A +
Sbjct: 408 RMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQ 467
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH +V + +++ +ALVDMYSKCG LG + F+ M ++++++++S+I G G
Sbjct: 468 GKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGS 527
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG A + D + G+ P+ + ++L AC H GLV+ G F MT+++GI+ + E
Sbjct: 528 HGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLE 587
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSL-PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
H +V LL AG +EEAYSF + PKP V G LL C GN +L +IVA ++
Sbjct: 588 HRACIVDLLSRAGRVEEAYSFYKRMFPKP-SMDVLGILLDACRTTGNVELGDIVAREIVI 646
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
P V L+++YA RWD V ++ + L+K G S++
Sbjct: 647 LKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFI 692
Score = 204 bits (520), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 208/399 (52%), Gaps = 3/399 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + AT L+ Y+ SAR +FD R+V W ++I Y A + A S++ +
Sbjct: 82 DSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMR 141
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
R ++P + T + E L L+ +H I G G D +++++ Y K ++
Sbjct: 142 RQGIQPSSVTMLGLLSGVLE---LVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVE 198
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A +F+ + D++ NS++SG+A G + LQL M G PD+ T L+S
Sbjct: 199 DAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAA 258
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
S L VG+ +HG L++ + ++ + L+ MY +C +NSA+ +F + H D+++W+A
Sbjct: 259 MQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTA 318
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+G Q A+ FR++ IASVLAA A+ + G +HGY+++
Sbjct: 319 MISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQR 378
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+L + ++LV MY+KCG+L VF+ MS R+I+++N+++ G +G +A F
Sbjct: 379 IKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFN 438
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ + PD T +LL AC G ++ G+ I +T+
Sbjct: 439 EMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK 477
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 204/395 (51%), Gaps = 8/395 (2%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL--PGLRFVHGG 129
+N+II + A F D + ++L T PD T+ + +AC+ + DL GL F H
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACT-SLDLFSHGLSF-HQR 73
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
IV G DS +++L+ YSK A KVFD + D ++V +MI + G D +
Sbjct: 74 VIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+++ M R G P T++GL+SG+ E L Q +H ++ F S +++ ++++
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNV 190
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C + A +F + D+++W++L++GY+Q G+ + L ++ G + D
Sbjct: 191 YCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTF 250
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
S+++AAA + + G ++HG++++ G E + ++L+ MY KCG + ++FE M
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++I++ ++I GL + A FR +++ + P +T +++L AC G G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
+ + I+ +V + G+LE++ S
Sbjct: 371 HGYILRQR-IKLDIPSQNSLVTMYAKCGHLEQSCS 404
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 167/346 (48%), Gaps = 1/346 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H + +A L +D T L+ +Y + SA +F+ + V W ++I
Sbjct: 267 KMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQN 326
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A ++F+ +L++++ P T A + AC+E P VHG + + D +
Sbjct: 327 DCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQ 386
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LVT Y+K ++++ VFD +S D+V N+++SG A G K+L LF+ M + +
Sbjct: 387 NSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQR 446
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T+V L+ L G+ IH F KS + + LV MY++C + SA
Sbjct: 447 PDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKC 506
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + DLV+WS++I GY G AL + G + + V+ S+L+A + + V
Sbjct: 507 FDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLV 566
Query: 323 WPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
G + H G E + + +VD+ S+ G + ++ M
Sbjct: 567 DQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM 612
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S +L + K +H V K+ L T LV +Y+ L SA+ FD+ PQ+
Sbjct: 455 LLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQD 514
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
+ W+SII Y + A ++ + L T ++P++ Y I ACS N + GL F H
Sbjct: 515 LVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFH 574
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
G+ + +V S+ ++EA
Sbjct: 575 SMTKDFGIEPRLEHRACIVDLLSRAGRVEEA 605
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S +P +++A+I S G + L + + D S++ A
Sbjct: 7 SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G H VI G+ ++++L++ YSK G+ +VF+TM +RN++ + ++I
Sbjct: 67 GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G AF + + +G+ P T LL
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLL 156
>gi|302144099|emb|CBI23204.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/526 (30%), Positives = 271/526 (51%), Gaps = 2/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA V + D A ++ +Y + A+ LF+ R V WNS++ YA
Sbjct: 168 LHACVIQYGFGSDVALANSMLNVYCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGN 227
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ L + ++PD T+ + A + S L + VHG + +GL +DS ++
Sbjct: 228 IREVLQLLIRMKTDGIEPDQQTFGSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETS 287
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K ++ A ++F+G+ D++ +MISG D ++ +F ML+ P
Sbjct: 288 LIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPS 347
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+ +++ E +G +HG+ L+ + LV+MYA+C + + VF+
Sbjct: 348 TATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQNSLVTMYAKCGHLEQSCSVFD 407
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+V+W+A+++G++Q G KAL F ++ ++ D + + S+L A A +
Sbjct: 408 RMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQRPDSITVVSLLQACASIGALHQ 467
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH +V + +++ +ALVDMYSKCG LG + F+ M ++++++++S+I G G
Sbjct: 468 GKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQDLVSWSSIIAGYGS 527
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG A + D + G+ P+ + ++L AC H GLV+ G F MT+++GI+ + E
Sbjct: 528 HGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFHSMTKDFGIEPRLE 587
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSL-PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
H +V LL AG +EEAYSF + PKP V G LL C GN +L +IVA ++
Sbjct: 588 HRACIVDLLSRAGRVEEAYSFYKRMFPKP-SMDVLGILLDACRTTGNVELGDIVAREIVI 646
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
P V L+++YA RWD V ++ + L+K G S++
Sbjct: 647 LKPANAGNYVQLAHSYASMKRWDGVGEVWTQMKSLHLKKLPGWSFI 692
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 118/399 (29%), Positives = 208/399 (52%), Gaps = 3/399 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + AT L+ Y+ SAR +FD R+V W ++I Y A + A S++ +
Sbjct: 82 DSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVAFSMYNIMR 141
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
R ++P + T + E L L+ +H I G G D +++++ Y K ++
Sbjct: 142 RQGIQPSSVTMLGLLSGVLE---LVHLQCLHACVIQYGFGSDVALANSMLNVYCKCGRVE 198
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A +F+ + D++ NS++SG+A G + LQL M G PD+ T L+S
Sbjct: 199 DAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTFGSLVSAAA 258
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
S L VG+ +HG L++ + ++ + L+ MY +C +NSA+ +F + H D+++W+A
Sbjct: 259 MQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTA 318
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+G Q A+ FR++ IASVLAA A+ + G +HGY+++
Sbjct: 319 MISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQR 378
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+L + ++LV MY+KCG+L VF+ MS R+I+++N+++ G +G +A F
Sbjct: 379 IKLDIPSQNSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFN 438
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ + PD T +LL AC G ++ G+ I +T+
Sbjct: 439 EMRKARQRPDSITVVSLLQACASIGALHQGKWIHNFVTK 477
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 204/395 (51%), Gaps = 8/395 (2%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL--PGLRFVHGG 129
+N+II + A F D + ++L T PD T+ + +AC+ + DL GL F H
Sbjct: 16 YNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACT-SLDLFSHGLSF-HQR 73
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
IV G DS +++L+ YSK A KVFD + D ++V +MI + G D +
Sbjct: 74 VIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTRAGEHDVA 133
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+++ M R G P T++GL+SG+ E L Q +H ++ F S +++ ++++
Sbjct: 134 FSMYNIMRRQGIQPSSVTMLGLLSGVLELVHL---QCLHACVIQYGFGSDVALANSMLNV 190
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C + A +F + D+++W++L++GY+Q G+ + L ++ G + D
Sbjct: 191 YCKCGRVEDAQALFELMDARDVISWNSLVSGYAQLGNIREVLQLLIRMKTDGIEPDQQTF 250
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
S+++AAA + + G ++HG++++ G E + ++L+ MY KCG + ++FE M
Sbjct: 251 GSLVSAAAMQSKLGVGKMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMH 310
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++I++ ++I GL + A FR +++ + P +T +++L AC G G +
Sbjct: 311 KDVISWTAMISGLVQNDCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSV 370
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
+ + I+ +V + G+LE++ S
Sbjct: 371 HGYILRQR-IKLDIPSQNSLVTMYAKCGHLEQSCS 404
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 167/346 (48%), Gaps = 1/346 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H + +A L +D T L+ +Y + SA +F+ + V W ++I
Sbjct: 267 KMVHGHILRAGLEQDSHIETSLIGMYLKCGNVNSAFRIFEGMMHKDVISWTAMISGLVQN 326
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A ++F+ +L++++ P T A + AC+E P VHG + + D +
Sbjct: 327 DCADMAVTVFRRMLKSRVMPSTATIASVLAACAELGSFPLGTSVHGYILRQRIKLDIPSQ 386
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LVT Y+K ++++ VFD +S D+V N+++SG A G K+L LF+ M + +
Sbjct: 387 NSLVTMYAKCGHLEQSCSVFDRMSRRDIVSWNAIVSGHAQNGHLCKALLLFNEMRKARQR 446
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T+V L+ L G+ IH F KS + + LV MY++C + SA
Sbjct: 447 PDSITVVSLLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKC 506
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + DLV+WS++I GY G AL + G + + V+ S+L+A + + V
Sbjct: 507 FDRMPQQDLVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLV 566
Query: 323 WPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
G + H G E + + +VD+ S+ G + ++ M
Sbjct: 567 DQGLSFFHSMTKDFGIEPRLEHRACIVDLLSRAGRVEEAYSFYKRM 612
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S +L + K +H V K+ L T LV +Y+ L SA+ FD+ PQ+
Sbjct: 455 LLQACASIGALHQGKWIHNFVTKSCLGPCILIDTALVDMYSKCGDLGSAQKCFDRMPQQD 514
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
+ W+SII Y + A ++ + L T ++P++ Y I ACS N + GL F H
Sbjct: 515 LVSWSSIIAGYGSHGKGETALRMYSDFLHTGIQPNHVIYLSILSACSHNGLVDQGLSFFH 574
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
G+ + +V S+ ++EA
Sbjct: 575 SMTKDFGIEPRLEHRACIVDLLSRAGRVEEA 605
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 65/150 (43%)
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S +P +++A+I S G + L + + D S++ A
Sbjct: 7 SFLNPATKSYNAIINRLSTAGAFCDVLLTYSSMLSTDTPPDAHTFPSLVKACTSLDLFSH 66
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G H VI G+ ++++L++ YSK G+ +VF+TM +RN++ + ++I
Sbjct: 67 GLSFHQRVIVDGYSSDSYIATSLINFYSKFGHNQSARKVFDTMDDRNVVPWTTMIGCYTR 126
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G AF + + +G+ P T LL
Sbjct: 127 AGEHDVAFSMYNIMRRQGIQPSSVTMLGLL 156
>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
Length = 814
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 275/544 (50%), Gaps = 4/544 (0%)
Query: 10 LELSKSHQSLSRTK-ELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQR 67
LEL K Q +LH K D T + +Y NN+ + LF+ P
Sbjct: 217 LELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNH 276
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFV 126
++ +N+II YA + + +A +F+ L ++ L D + + RAC+ DL GL+ V
Sbjct: 277 NLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQ-V 335
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG ++ S + ++A++ Y K + EA VF+ + D V N++I+ G
Sbjct: 336 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 395
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+K+L LF WML+ G PDE+T ++ L+ G IH +KS +V L
Sbjct: 396 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIAL 455
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY++C M A + + L +V+W+A+I+G+S Q +A F K+ G D
Sbjct: 456 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 515
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
A++L A V G IH +I+ + +SS LVDMYSKCG + +FE
Sbjct: 516 FTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 575
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
R+ +T+N+++ G HG +A + F + + + P+ +TF A+L AC H GLV G
Sbjct: 576 APNRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKG 635
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
F M YG+ + EHY +V ++G +G + +A I +P D + LLS C
Sbjct: 636 LHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCK 695
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
I+GN ++AE A+ + + +P A V+LSN YA G W++V KLR + NGL+KE G
Sbjct: 696 IHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGC 755
Query: 547 SWVS 550
SW+
Sbjct: 756 SWIE 759
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 127/530 (23%), Positives = 226/530 (42%), Gaps = 86/530 (16%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+ + ++L K+ HA + F L+++Y + L A +FD PQR
Sbjct: 48 IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGMPQRD 107
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFK---------------NLLRTQLKPDNFTYACITRA 113
WN+++ YA A+ LF + R D T+A + ++
Sbjct: 108 TVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFAVVLKS 167
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK-----------LSLIDEAIK-- 160
CS D G +HG A+ G D +T SAL+ Y+K L L E K
Sbjct: 168 CSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCCVQNDDLRGGLELFKEMQKAG 227
Query: 161 -----------------------------------------VFDGVSDPDLVLCNSMISG 179
+F+ + + +L N++I G
Sbjct: 228 VGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSYNAIIVG 287
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG------LISGLWEPSLLSVGQGIHGFCLK 233
+A ++L +F + + G DE +L G +I G E G +HG +K
Sbjct: 288 YARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLE------GLQVHGLSMK 341
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
S S V++ ++ MY +C + A VF + D V+W+A+I + Q G+ K L
Sbjct: 342 SLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEKTLSL 401
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F + G + D SVL A A + G IH +I+ L V AL+DMYSK
Sbjct: 402 FVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSK 461
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + ++ + ++E+ ++++N++I G L + +A + F ++E G++PD T++ +
Sbjct: 462 CGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATI 521
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEE 461
L C + V G++I ++ ++ + +++ YI +V + GN+++
Sbjct: 522 LDTCANLVTVELGKQIHAQIIKK---ELQSDAYISSTLVDMYSKCGNMQD 568
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 147/318 (46%), Gaps = 14/318 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ Q+L+ E+H + K+ + D F L+ +Y+ ++ A L D+ +++
Sbjct: 420 VLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQT 479
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN+II ++L + +A+ F +L + PDNFTYA I C+ + + +H
Sbjct: 480 VVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHA 539
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I L D+ SS LV YSK + + +F+ + D V N+M+ G+A G ++
Sbjct: 540 QIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEE 599
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+L++F++M P+ T + ++ GL E L + + L + Y
Sbjct: 600 ALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHY---- 655
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY---GKALYYFRKLNM 299
S +V + R ++ A + + F D V W L++ G+ KA Y +L
Sbjct: 656 SCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEP 715
Query: 300 QGKKADPVLIASVLAAAA 317
+ A VL++++ A A
Sbjct: 716 EDSAA-YVLLSNIYANAG 732
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 165/415 (39%), Gaps = 71/415 (17%)
Query: 90 SLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY 149
S F + T K F++ I + CS+ L + H I++ ++ L+ Y
Sbjct: 30 SPFSSYQATPTKKKTFSH--IFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMY 87
Query: 150 SKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML------------ 197
K S + A KVFDG+ D V N+M+ G+A G + +LFD M
Sbjct: 88 IKCSDLGFAFKVFDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDF 147
Query: 198 ---RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
R+G D T ++ G IHG +K FD S L+ MYA+C
Sbjct: 148 RMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCC 207
Query: 255 CMNSAY----------------------HVFNSLFHPDLV-------------------- 272
N H + F D+V
Sbjct: 208 VQNDDLRGGLELFKEMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSN 267
Query: 273 ------------TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+++A+I GY++ +AL FR L G D V ++ A A
Sbjct: 268 QLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIK 327
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G +HG ++ + ++ V++A++DMY KCG L VFE M R+ +++N++I
Sbjct: 328 GDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIA 387
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+G + F +++ G+ PDE T+ ++L AC +N G EI R+ +
Sbjct: 388 AHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIK 442
>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
Length = 863
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/528 (32%), Positives = 274/528 (51%), Gaps = 1/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+E+HA V + + L+ +YA + +AR +FD WN++I +
Sbjct: 209 REVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAGHFEN 268
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
N LF +L +++P+ T +T A SD+ + +HG A+ G D
Sbjct: 269 GECNAGLELFLTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGFAGDVAFC 328
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+ L ++ +A VF + D + +MISG+ GF DK+L+++ M +
Sbjct: 329 NSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALMEVNNVS 388
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ T+ ++ L VG +H F SY V++ ++ MYA+ ++ A V
Sbjct: 389 PDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEV 448
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V+WS++I G+ +ALYYFR + + K + V + LAA A + +
Sbjct: 449 FKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHM-LADVKPNSVTFIAALAACAATGAL 507
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +V++ G E + +AL+D+Y KCG G F ++++++N +I G
Sbjct: 508 RSGKEIHAHVLRCGIEYEGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGF 567
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG A FF +++ G PDE TF ALLCAC GG+V++G E+F MTE+Y I
Sbjct: 568 VAHGHGDTALSFFNQMVKIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPN 627
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY MV LL AG L EAY+FI +P D AV GALL+ C I+ + +L E+ A +
Sbjct: 628 LKHYACMVDLLSRAGQLTEAYNFINEMPITPDAAVWGALLNGCRIHRHVELGELAAKYVL 687
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+P Y V+L + YA+ WD + ++R + + GL ++G SWV
Sbjct: 688 ALEPNDAGYHVLLCDLYADACLWDKLARVRKTMREKGLDHDSGCSWVE 735
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 113/372 (30%), Positives = 195/372 (52%), Gaps = 5/372 (1%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K P+R VF WN ++ Y + ++A L+ ++ ++PD +T+ C+ R+C D
Sbjct: 145 VFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVPD 204
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
R VH + G G + +AL+T Y+K + A KVFD ++ D + N+MI+G
Sbjct: 205 WRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIAG 264
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTL--VGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G + L+LF ML P+ T+ V + SGL S ++ + +HG +K F
Sbjct: 265 HFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLL--SDVTFAKEMHGLAVKRGFA 322
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ L+ MYA M A VF+ + D +TW+A+I+GY + G KAL + +
Sbjct: 323 GDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYALM 382
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ D + IAS LAA A ++ G +H GF ++V++A+++MY+K +
Sbjct: 383 EVNNVSPDDITIASALAACACLGSLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRI 442
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
I+VF+ M E+++++++S+I G + ++A +FR ++ + P+ TF A L AC
Sbjct: 443 DKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYYFRHMLAD-VKPNSVTFIAALAAC 501
Query: 418 CHGGLVNDGREI 429
G + G+EI
Sbjct: 502 AATGALRSGKEI 513
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 146/313 (46%), Gaps = 8/313 (2%)
Query: 102 PDNFTYACITRACSENSDL-PGLR-FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
PD Y + R C + PGLR H + G +A+++ + A
Sbjct: 86 PDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLR--LGNAMLSMLVRFGETWHAW 143
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
+VF + + D+ N M+ G+ G D++L L+ M+ G PD YT ++
Sbjct: 144 RVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGVRPDVYTFPCVLRSCGGVP 203
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
+G+ +H L+ F V + L++MYA+C + +A VF+S+ D ++W+A+I
Sbjct: 204 DWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAARKVFDSMTVMDCISWNAMIA 263
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHGYVIQHGF 337
G+ + G+ L F L M + P L I SV A+ ++V +HG ++ GF
Sbjct: 264 GHFENGECNAGLELF--LTMLHDEVQPNLMTITSVTVASGLLSDVTFAKEMHGLAVKRGF 321
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
V ++L+ MY+ G + VF M R+ +T+ ++I G +GF +A E +
Sbjct: 322 AGDVAFCNSLIQMYASLGMMRQARTVFSRMDTRDAMTWTAMISGYEKNGFPDKALEVYAL 381
Query: 398 IIEKGLNPDESTF 410
+ ++PD+ T
Sbjct: 382 MEVNNVSPDDITI 394
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 116/265 (43%), Gaps = 3/265 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL +LH L + ++ +YA + + A +F ++ V W+S+I
Sbjct: 406 SLDVGVKLHELAESKGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIA 465
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ HR +A F+++L +KP++ T+ AC+ L + +H + G+
Sbjct: 466 GFCFNHRNFEALYYFRHML-ADVKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEY 524
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ +AL+ Y K A F D+V N MI+GF G D +L F+ M+
Sbjct: 525 EGYLPNALIDLYVKCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMV 584
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVG-QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
++G+ PDE T V L+ ++S G + H K S + +V + +R +
Sbjct: 585 KIGECPDEVTFVALLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQL 644
Query: 257 NSAYHVFNSL-FHPDLVTWSALITG 280
AY+ N + PD W AL+ G
Sbjct: 645 TEAYNFINEMPITPDAAVWGALLNG 669
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 99/201 (49%), Gaps = 7/201 (3%)
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ + ++SM R A+ VF + D+ +W+ ++ GY + G +AL + ++ G
Sbjct: 125 LGNAMLSMLVRFGETWHAWRVFAKMPERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAG 184
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D VL + + G +H +V++ GF V V +AL+ MY+KCG +
Sbjct: 185 VRPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFGFGEEVDVLNALMTMYAKCGDVMAAR 244
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF++M+ + I++N++I G +G E F ++ + P+ T +++ A G
Sbjct: 245 KVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVA---SG 301
Query: 422 LVNDGREIFTRMTEEYGIQAK 442
L++D T E +G+ K
Sbjct: 302 LLSD----VTFAKEMHGLAVK 318
>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 268/542 (49%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L R +E+HA V + D L+ +Y + SAR+LFDK P R
Sbjct: 141 VLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRD 200
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN++I Y + LF + + PD T + AC D +H
Sbjct: 201 RISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHS 260
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + + ++L+ Y + EA VF G+ D+V ++ISG DK
Sbjct: 261 YVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDK 320
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+ + M G PDE T+ ++S L +G +H ++ Y V++ L+
Sbjct: 321 ALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLID 380
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C + A +F+ + D+++W+++I G +AL +FRK+ ++ K L
Sbjct: 381 MYSKCKRIEKALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKSKPNSVTL 440
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I S L+A A+ + G IH + ++ G + +A++D+Y +CG + + F ++
Sbjct: 441 I-SALSACARVGALMCGKEIHAHALKAGMGFDGFLPNAILDLYVRCGRMRTALNQF-NLN 498
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E+++ +N ++ G G E F+ ++E +NPD+ TF +LLCAC G+V +G E
Sbjct: 499 EKDVGAWNILLTGYAQKGKGAMVMELFKRMVESEINPDDVTFISLLCACSRSGMVTEGLE 558
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F RM Y I +HY +V LLG AG L EA+ FI +P DPA+ GALL+ C I+
Sbjct: 559 YFQRMKVNYHITPNLKHYACVVDLLGRAGKLNEAHEFIERMPIKPDPAIWGALLNACRIH 618
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ L E+ A +F+ D Y ++L N YA+ G+WD+V K+R + + GL + G SW
Sbjct: 619 RHVLLGELAAQHIFKQDAESIGYYILLCNLYADSGKWDEVAKVRRTMKEEGLIVDPGCSW 678
Query: 549 VS 550
V
Sbjct: 679 VE 680
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 189/370 (51%), Gaps = 1/370 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F + +R +F WN ++ Y A F++A L+ +L ++PD +T+ + R+C+ D
Sbjct: 91 VFGRMGERDLFSWNVLVGGYTKAGFFDEALCLYHRILWAGIRPDVYTFPSVLRSCAGAMD 150
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L R VH + D +AL+T Y K + A +FD + D + N+MISG
Sbjct: 151 LVRGREVHAHVVRFDFDMDVDVVNALITMYVKCGDVVSARMLFDKMPTRDRISWNAMISG 210
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ + L+LF M L PD T+ +IS +G +H + +++++D
Sbjct: 211 YFENDECLEGLELFFRMRELSIDPDLMTMTSVISACELLGDERLGTQLHSYVVRTAYDGN 270
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
V + L+ MY A VF+ + D+V+W+ +I+G KAL ++ + +
Sbjct: 271 ISVYNSLIQMYLSVGHWKEAESVFSGMECRDVVSWTTIISGCVDNLLPDKALETYKTMEI 330
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G D V IASVL+A A + G +H + G L V+V+++L+DMYSKC +
Sbjct: 331 TGTMPDEVTIASVLSACASLGQLDMGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEK 390
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+++F + ++++I++ SVI GL ++ ++A FFR +I K P+ T + L AC
Sbjct: 391 ALEIFHQIPDKDVISWTSVINGLRINNRCFEALIFFRKMILKS-KPNSVTLISALSACAR 449
Query: 420 GGLVNDGREI 429
G + G+EI
Sbjct: 450 VGALMCGKEI 459
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/403 (22%), Positives = 189/403 (46%), Gaps = 12/403 (2%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
NS + L+ A ++ ++ + + + R C +V +
Sbjct: 2 NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61
Query: 133 SGLGRDSIT-SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
S + S+ +AL++ + + + A VF + + DL N ++ G+ GF+D++L
Sbjct: 62 SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMGERDLFSWNVLVGGYTKAGFFDEALC 121
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
L+ +L G PD YT ++ L G+ +H ++ FD V + L++MY
Sbjct: 122 LYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFDFDMDVDVVNALITMYV 181
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C + SA +F+ + D ++W+A+I+GY + + + L F ++ D + + S
Sbjct: 182 KCGDVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMTMTS 241
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
V++A + G +H YV++ ++ ++ V ++L+ MY G+ VF M R+
Sbjct: 242 VISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSVGHWKEAESVFSGMECRD 301
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++++ ++I G + +A E ++ + G PDE T +++L AC G ++ G ++
Sbjct: 302 VVSWTTIISGCVDNLLPDKALETYKTMEITGTMPDEVTIASVLSACASLGQLDMGMKL-- 359
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
+ + +T H +Y+V +A +L + YS + K ++
Sbjct: 360 -----HELAERTGHILYVV----VANSLIDMYSKCKRIEKALE 393
>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 805
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 175/593 (29%), Positives = 292/593 (49%), Gaps = 72/593 (12%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L +SL+ K++H+++ S+ D KLV YA L R +FD +++
Sbjct: 105 VLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKN 164
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL---KPDN----FTYACITRACSENSDLP 121
V+LWN ++ YA F ++ LFK ++ + +P++ F C S NS +
Sbjct: 165 VYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMIS 224
Query: 122 GL--------------------------------------------RFVHGGAIVSGLGR 137
G + VH AI S R
Sbjct: 225 GYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFER 284
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S+ L+ YSK +D A++VF+ + + ++V SMI+G+ G+ D ++ L M
Sbjct: 285 RINFSNTLLDMYSKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQME 344
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G D + ++ L G+ +H + ++ S +V + L+ MYA+C M
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAKCGSME 404
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+++ D+++W+ ++ G+ K D +A +L A A
Sbjct: 405 GANSVFSTMVVKDIISWNTMV------GEL---------------KPDSRTMACILPACA 443
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G IHGY++++G+ V++ALVD+Y KCG LGL +F+ + ++++++
Sbjct: 444 SLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIPSKDLVSWTV 503
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G G+HG+ +A F ++ + G+ PDE +F ++L AC H GL+ G F M ++
Sbjct: 504 MIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDF 563
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I+ K EHY MV LL GNL +AY FI +LP D + GALL C IY + +LAE V
Sbjct: 564 NIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCGCRIYHDIELAEKV 623
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A ++FE +P Y V+L+N YAE + ++V ++R+ I GLRK G SW+
Sbjct: 624 AERVFELEPENTGYYVLLANIYAEAEKREEVKRMREKIGKKGLRKNPGCSWIE 676
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 74/177 (41%), Gaps = 12/177 (6%)
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IH LK++F S + S + V + A + ++A I + Q GD
Sbjct: 32 IHKPSLKTTFFSPIFRSCIPVRISA----------TPTRTIDHQVTDYNAKILHFCQLGD 81
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
A+ Q + + SVL A ++ G +H + + + +
Sbjct: 82 LENAMELV--CMCQKSELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNSVGVDEALGLK 139
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
LV Y+ CG L G +VF+TM ++N+ +N ++ G ++ F+ ++EKG+
Sbjct: 140 LVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGI 196
>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 271/528 (51%), Gaps = 2/528 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V K L LV +Y + +R +FD+ +R+ WN+II + A
Sbjct: 129 RQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYL 188
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R DA +F+ ++ +KP++ T++ + E + +HG ++ GL D +
Sbjct: 189 ERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVA 248
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K +A VF+ + + ++V N+M++ FA ++ L M G+
Sbjct: 249 NALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEI 308
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T ++ L G+ IH +++ +VS+ L MYA+C C+N A V
Sbjct: 309 PNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRV 368
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F D V+++ LI GYSQ + ++L F ++ ++G K D V V++A A A +
Sbjct: 369 FKISLR-DEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAAL 427
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +HG ++ + +++AL+D Y KCG + L +VF + R+ ++NS+ILG
Sbjct: 428 KQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGY 487
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+ G A F + E G+ D ++ A+L AC HGGLV +G++ F M + I+
Sbjct: 488 GMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQ-NIKPT 546
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
HY MV LLG AG +EEA I SLP D V GALL C I+G +LA A LF
Sbjct: 547 QMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGACRIHGYIELAHWAAEHLF 606
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ P+ Y +LSN YAE G+WD+ ++R + G +K G SWV
Sbjct: 607 KLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSWVQ 654
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 214/423 (50%), Gaps = 2/423 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ S+ + +E+H +V K D F L+ Y L + +FD+ +R
Sbjct: 12 FVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVKRVFDEMLER 71
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITRACSENSDLPGLRFV 126
V WNS+I +++ + +A LF + LR+ +P+ + + C+ D R +
Sbjct: 72 DVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQI 131
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + +GL +ALV Y K + ++ +VFD +S+ + V N++I+ A+
Sbjct: 132 HCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNAIITSLAYLERN 191
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+L++F M+ G P+ T ++ L E L G+ IHGF L+ +S +V++ L
Sbjct: 192 QDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVANAL 251
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+ A +VFN + ++V+W+A++ ++Q A+ R++ G+ +
Sbjct: 252 IDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNS 311
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V +VL A A+ + PG IH I+ G + + VS+AL DMY+KCG L L +VF+
Sbjct: 312 VTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTDMYAKCGCLNLARRVFK- 370
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+S R+ ++YN +I+G ++ F ++ KG+ D ++ ++ AC + + G
Sbjct: 371 ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQG 430
Query: 427 REI 429
+E+
Sbjct: 431 KEV 433
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 170/337 (50%), Gaps = 7/337 (2%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
++ D+ T+ + +AC+++ + R +HG G D + L+ Y + +
Sbjct: 3 VRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDVK 62
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGLI---SGL 215
+VFD + + D+V NS+I F+ GF+ +++ LF M LR G P+ ++V ++ +GL
Sbjct: 63 RVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCAGL 122
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ G+ IH + +K+ DS V + LV +Y +C + + VF+ + + V+W+
Sbjct: 123 EDG---VTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWN 179
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A+IT + AL FR + G K + V +S+L + G IHG+ ++
Sbjct: 180 AIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRF 239
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G E + V++AL+DMY+K G VF + E+NI+++N+++ + A +
Sbjct: 240 GLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLELAAVDLV 299
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
R + G P+ TF+ +L AC G + G+EI R
Sbjct: 300 RQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHAR 336
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 127/232 (54%), Gaps = 1/232 (0%)
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+G D++T ++ + + G+ IHG K FDS +V + L+ Y C +
Sbjct: 1 MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKD 60
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIASVLAAAA 317
VF+ + D+V+W+++I +S G Y +A++ F ++N++ G + + V I SVL A
Sbjct: 61 VKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G IH YV++ G + V V +ALVD+Y KCGY+ +VF+ +SERN +++N+
Sbjct: 121 GLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKCGYVKDSRRVFDEISERNGVSWNA 180
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+I L A E FR +I+ G+ P+ TFS++L L + G+EI
Sbjct: 181 IITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEI 232
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + KE+H L + L F A L+ Y + A +F + P R WNS+I
Sbjct: 426 ALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMIL 485
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y + A +LF+ + ++ D+ +Y + ACS + + V +
Sbjct: 486 GYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKP 545
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVS-DPD 169
+ + +V + LI+EA+K+ + + +PD
Sbjct: 546 TQMHYACMVDLLGRAGLIEEAVKLIESLPIEPD 578
>gi|296087156|emb|CBI33530.3| unnamed protein product [Vitis vinifera]
Length = 614
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 275/513 (53%), Gaps = 6/513 (1%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFN--DAKSLFKNLLRTQ 99
KL+ LY + A LFD P+R V +N++I A ++ + ++ D L+ + +
Sbjct: 98 NKLLSLYLKFGHIHHAHQLFDTMPRRDVVSFNTMISA-SVRNNYDALDLVGLYSKMKKED 156
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
+KP++ T+A + AC L H + GL + S+LV Y+K +++AI
Sbjct: 157 VKPNHITFAGLIGACDGLIALRLRGIFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAI 216
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
K F+ + + DLV N MI G A + ++++F ML+ D +TL +I +P
Sbjct: 217 KAFNEIMELDLVSWNIMIDGCARNNSKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPG 276
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC-NCMNSAYHVFNSLFHPDLVTWSALI 278
L G HG +K + + L++MY++C + S +F S+ P++++W+A+I
Sbjct: 277 DLKHGMQFHGSAIKLGLAHETPIYNALITMYSKCEKGVASPVKIFGSISEPNIISWTAMI 336
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+G+ Q +A+ F+++ G + + +S+L AN+ G IH +I+ F
Sbjct: 337 SGFMQNEQNEEAIGLFKEMLRLGVRENDFSFSSILPVYGNLANLEQGKQIHARIIKSWFG 396
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
L + V++AL+DMYSKCG L VF M + ++++ ++I+ G HG +A E ++
Sbjct: 397 LDLSVNNALIDMYSKCGSLEDAHLVFMKMGKHDVVSCTTMIMSYGQHGKGKEALEILAEM 456
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+GL PD TF L AC HGGLV +G +F M E++ ++ K EH+ +V +LG AG
Sbjct: 457 KSEGLVPDGVTFLGCLYACSHGGLVEEGVRVFKIMIEDHNLKPKREHFACVVDMLGRAGR 516
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP-RKGAYKVMLSN 517
L EA +FI + D V LL C ++G L E A ++ E P R G Y V+L+N
Sbjct: 517 LNEAENFIDEMGIESDVLVWETLLGACRVHGEMVLGEKSAQKIMELQPGRHGPY-VLLAN 575
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
YAE G W+D + +R+ +V +GL+K+ G SWV+
Sbjct: 576 IYAERGSWEDKVMVREKLVSHGLKKQVGCSWVA 608
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 172/370 (46%), Gaps = 9/370 (2%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
++ I + C++ DL VH + + + + L++ Y K I A ++FD +
Sbjct: 62 FSQILQECTDAGDLRTGMSVHTYLVKLNINGFILIWNKLLSLYLKFGHIHHAHQLFDTMP 121
Query: 167 DPDLVLCNSMISGFAHCGFWDKSL-QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
D+V N+MIS + L L+ M + P+ T GLI L +
Sbjct: 122 RRDVVSFNTMISASVRNNYDALDLVGLYSKMKKEDVKPNHITFAGLIGACDGLIALRLRG 181
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
H ++ S ++V S LV YA+ + A FN + DLV+W+ +I G ++
Sbjct: 182 IFHAHTVRCGLSSNEFVGSSLVDGYAKQMKLEDAIKAFNEIMELDLVSWNIMIDGCARNN 241
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
A+ F ++ + D + S++ +K ++ G HG I+ G + +
Sbjct: 242 SKEHAVRMFSQMLKGNVRVDGFTLTSIIKTCSKPGDLKHGMQFHGSAIKLGLAHETPIYN 301
Query: 346 ALVDMYSKCGY-LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
AL+ MYSKC + +++F ++SE NII++ ++I G + +A F++++ G+
Sbjct: 302 ALITMYSKCEKGVASPVKIFGSISEPNIISWTAMISGFMQNEQNEEAIGLFKEMLRLGVR 361
Query: 405 PDESTFSALLCACCHGGLVN--DGREIFTRMTEE-YGIQAKTEHYIYMVKLLGLAGNLEE 461
++ +FS++L +G L N G++I R+ + +G+ + ++ + G+LE+
Sbjct: 362 ENDFSFSSILPV--YGNLANLEQGKQIHARIIKSWFGLDLSVNN--ALIDMYSKCGSLED 417
Query: 462 AYSFIWSLPK 471
A+ + K
Sbjct: 418 AHLVFMKMGK 427
>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
[Vitis vinifera]
gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
Length = 687
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 268/549 (48%), Gaps = 36/549 (6%)
Query: 38 PFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL- 96
P A K +++Y+ + L AR LFDK PQ + W +I A R +A + +
Sbjct: 11 PHLALKFIKVYSNSGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRH 70
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ ++PD + +AC+ D+ + VH AI G D + +AL+ Y K +
Sbjct: 71 KNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSE 130
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A VF+G+ D++ SM S + +CG ++L F M G+ P+ T+ ++
Sbjct: 131 GARLVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACT 190
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ L G+ +HGF +++ +VSS LV+MYA C + A VF+S+ D V+W+
Sbjct: 191 DLKDLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNV 250
Query: 277 LITGY-----------------------------------SQQGDYGKALYYFRKLNMQG 301
LIT Y Q G KAL ++ G
Sbjct: 251 LITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG 310
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
K + + I SVL A ++ G IHGY+ +H F + ++ALV MY+KCG L L
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF M++R+ +++N++I+ +HG +A FR++++ G+ P+ TF+ +L C H
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV++G IF M+ ++ ++ +H+ MV +L AG LEEAY FI +P GAL
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L C +Y N +L I A++LFE + V+LSN W + + R + D G+
Sbjct: 491 LGGCRVYKNVELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVT 550
Query: 542 KEAGVSWVS 550
K G SW+
Sbjct: 551 KNPGCSWIQ 559
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 168/400 (42%), Gaps = 39/400 (9%)
Query: 7 FLVLELSKSHQSLS---RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
L+L ++K+ SL K +H + D L+ +Y AR++F+
Sbjct: 79 LLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCSEGARLVFEG 138
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P R V W S+ Y +A F+ + +P++ T + I AC++ DL
Sbjct: 139 MPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSG 198
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV------------ 171
R VHG + +G+G + SSALV Y+ I +A VFD +S D V
Sbjct: 199 REVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLN 258
Query: 172 -LC----------------------NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
C N++I G G +K+L++ M G P++ T+
Sbjct: 259 KECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITI 318
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
++ L G+ IHG+ + F ++ LV MYA+C + + VF+ +
Sbjct: 319 TSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTK 378
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D V+W+ +I S G+ +AL FR++ G + + V VL+ + S V G +I
Sbjct: 379 RDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLI 438
Query: 329 HGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ + H E S +VD+ S+ G L + + M
Sbjct: 439 FDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKM 478
>gi|224145066|ref|XP_002325515.1| predicted protein [Populus trichocarpa]
gi|222862390|gb|EEE99896.1| predicted protein [Populus trichocarpa]
Length = 683
Score = 280 bits (716), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 172/571 (30%), Positives = 290/571 (50%), Gaps = 39/571 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL + K+LHA KLV Y+ ++L A + + + WN +I
Sbjct: 55 KSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLI 114
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+Y +A S ++ ++ ++PDNFTY + +AC E DL R VH +I + G
Sbjct: 115 SSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHE-SINAAYG 173
Query: 137 R--DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ ++LV+ Y K +D A ++F+ + + D V N +IS +A G W ++ +LF+
Sbjct: 174 HRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKEAFELFE 233
Query: 195 WMLRLGKTPDEYTL--------------------------------VGLISGLWEPS--- 219
M G + T V +I GL S
Sbjct: 234 EMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLGACSHIG 293
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
+ +G IH ++S FD +D V + L++MY+RC + A +F S+ L TW+++++
Sbjct: 294 AIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTTWNSMLS 353
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFE 338
GY+ +A + FR++ G + + V IAS+L A+ AN+ G H Y+++ GFE
Sbjct: 354 GYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIMRREGFE 413
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+++ ++LV+MY++ G + +VF+++ R+ +TY S+I G G+ G A + F ++
Sbjct: 414 DYLLLWNSLVEMYARSGKVLSAKRVFDSLRRRDKVTYTSLIAGYGIQGEGKTALKLFDEM 473
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
I+ + PD+ T A+L AC H GLV +G +F +M+ YGI EH+ MV L G AG
Sbjct: 474 IKHRIKPDQVTMVAVLSACSHSGLVTEGNVLFEKMSTLYGIVPAVEHFSCMVDLFGRAGL 533
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
L +A I S+P A+ L+ C I+GN+++ E A +L E P Y V+++N
Sbjct: 534 LNKAKKVITSMPYRPTTAMWATLVGACRIHGNTEIGEWAAEKLLEMKPENPGYYVLIANM 593
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+A GRW + ++R + D G+RK G +WV
Sbjct: 594 HAAAGRWSKLAEVRTYMRDLGVRKAPGCTWV 624
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 187/432 (43%), Gaps = 46/432 (10%)
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA--IKVFDGVSDPDL 170
+C+ LP + +H I G + LVT YS SL+ +A I V + +P
Sbjct: 50 SCTNLKSLPQGKQLHAHTISLGFENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNP-- 107
Query: 171 VLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
+ N +IS + + G ++L + M+ G PD +T ++ E L G+ +H
Sbjct: 108 LPWNLLISSYVNNGLHGEALSAYREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHES 167
Query: 231 CLKSSFDSYD-YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+ ++ YV + LVSMY + +++A +FN + D V+W+ +I+ Y+ +G + +
Sbjct: 168 INAAYGHRWNLYVHNSLVSMYGKFGELDAARRLFNQMPERDAVSWNGIISNYASRGLWKE 227
Query: 290 ALYYFRKLNMQGKKA-----------------------------------DPVLIASVLA 314
A F ++ + G + DPV + L
Sbjct: 228 AFELFEEMRLAGAEVNIITWNTIAGGCVQTRNFKGALELLSQMRRCDIDLDPVAMIIGLG 287
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + + G VIH I+ F+ V +AL+ MYS+C L +F+++ +++ T
Sbjct: 288 ACSHIGAIKLGTVIHASAIRSCFDGFDNVRNALITMYSRCKDLRHADILFKSIKTKSLTT 347
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS++ G + +A FR+++ G+ P+ T +++L C + G+E +
Sbjct: 348 WNSMLSGYTHMDRSEEASFLFREMLFSGIEPNYVTIASILPHCARVANLQQGKEFHCYIM 407
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
G + + +V++ +G + A SL + D +L++ I G A
Sbjct: 408 RREGFEDYLLLWNSLVEMYARSGKVLSAKRVFDSLRRR-DKVTYTSLIAGYGIQGEGKTA 466
Query: 495 -----EIVAHQL 501
E++ H++
Sbjct: 467 LKLFDEMIKHRI 478
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 282 SQQGDYGKALYYFR--KLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHGYVIQHGF 337
+++G KA F KL+ D +L I+S+L + ++ G +H + I GF
Sbjct: 13 ARKGHLLKAFETFSLIKLHASSANRDAILHSISSLLYSCTNLKSLPQGKQLHAHTISLGF 72
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI---LGLGLHGFTYQAFEF 394
E +++ LV YS L + N + +N +I + GLHG +A
Sbjct: 73 ENHLVLVPKLVTFYSSFSLLADAHTITVNSDIVNPLPWNLLISSYVNNGLHG---EALSA 129
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
+R+++ KG+ PD T+ ++L AC ++ GRE+ + YG + + +V + G
Sbjct: 130 YREMVHKGVRPDNFTYPSVLKACGEKLDLDFGREVHESINAAYGHRWNLYVHNSLVSMYG 189
Query: 455 LAGNLEEAYSFIWSLPK 471
G L+ A +P+
Sbjct: 190 KFGELDAARRLFNQMPE 206
>gi|125550837|gb|EAY96546.1| hypothetical protein OsI_18451 [Oryza sativa Indica Group]
Length = 591
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 176/541 (32%), Positives = 271/541 (50%), Gaps = 14/541 (2%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYA-TKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
H ++ + L A LR A LV +YA A +FD+ R WNS
Sbjct: 34 HAAVVKNPAHFRLCASRPWLRHVLVAWNALVSMYARCGRREDAARVFDEMRVRDAVSWNS 93
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSEN--SDLPGLRFVHGGAI 131
+I A A DA +LF+ +LR+ + D T+ + C+ + LP VHG +
Sbjct: 94 LIAASRGA---GDALALFRRMLRSDARACDRATFTTVLSECARAGAASLPACAMVHGLVV 150
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G + +ALVTAY + A +VF G+++ +++ +MISG A + +S
Sbjct: 151 SCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKESFS 210
Query: 192 LFDWMLRLGKTPDEY---TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
LF M+R + TL+ L GQ +HG +K+ F++ +V S L+
Sbjct: 211 LFGQMIRTVDANNATYSCTLLACARSLAARE----GQQVHGLVVKAGFEADLHVESGLMD 266
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+Y++C M A VF S PD V + ++ G++Q G KA F ++ G + D
Sbjct: 267 VYSKCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENT 326
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+++VL A SA G IH VI+ F ++ V + LV+MYSKCG L +QVF+ M
Sbjct: 327 VSTVLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVQVFDEMP 386
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+N +++NS+I HG + ++ F + G P + TF +LL AC H G G E
Sbjct: 387 SKNSVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLE 446
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
I M+ +YG+ + EHY +V +LG AG L++A SFI P + AL+ C +
Sbjct: 447 ILNSMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDSALLWQALMGACSFH 506
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GNS++ + A +L DP A V+LSN Y+ +GRWDD K+ + + GLRK+ G SW
Sbjct: 507 GNSEVGKHAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSW 566
Query: 549 V 549
+
Sbjct: 567 I 567
>gi|347954528|gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
Length = 666
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/570 (28%), Positives = 295/570 (51%), Gaps = 36/570 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQRSVFLWN 73
Q L + +HA + K L + +KL+ L+ + LP A +F+ + ++ +WN
Sbjct: 1 QILQSLRMIHAQMIKTGLHNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNLLIWN 60
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++ R +AL+ A L+ ++ L P+++T+ + ++C+++ + +HG +
Sbjct: 61 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKL 120
Query: 134 GLG-------------------------------RDSITSSALVTAYSKLSLIDEAIKVF 162
G RD ++ +AL+ Y+ I+ A K+F
Sbjct: 121 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRDVVSYTALIKGYASRGYIENAQKMF 180
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + D+V N+MISG+A G + ++L+LF M++ PDE T+V ++S + +
Sbjct: 181 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 240
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G+ +H + F S + + L+ +Y++C + +A +F L + D+++W+ LI GY+
Sbjct: 241 LGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKDVISWNTLIGGYT 300
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH--GFELS 340
Y +AL F+++ G+ + V + S+L A A + G IH Y+ + G +
Sbjct: 301 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVANA 360
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ ++L+DMY+KCG + QVF ++ +++ ++N++I G +HG +F+ F + +
Sbjct: 361 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDIFSRMRK 420
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G+ PD+ TF LL AC H G+++ GR IF MT++Y + K EHY M+ LLG +G +
Sbjct: 421 NGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMTPKLEHYGCMIDLLGHSGLFK 480
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
EA I ++ D + +LL C ++GN +L E A L + +P V+LSN YA
Sbjct: 481 EAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPENPGSYVLLSNIYA 540
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
GRW++V R + D G++K G S +
Sbjct: 541 TAGRWNEVANTRALLNDKGMKKVPGCSSIE 570
>gi|255560101|ref|XP_002521068.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539637|gb|EEF41219.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 579
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/528 (31%), Positives = 282/528 (53%), Gaps = 4/528 (0%)
Query: 24 ELHALVAKASLL-RDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++HAL+ L D +L+ Y +NN++P AR +F+K PQRS+ WNS+I AY+
Sbjct: 3 QIHALILTTGLFFNDANSIAQLIASYGRINNIIP-ARNVFEKMPQRSINAWNSMIIAYSR 61
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ ++ +L+ ++ +KPD+ T+ +ACS DL + A+ G G D
Sbjct: 62 TNYPDEVLNLYYRMISEGIKPDSSTFTVTLKACSSLMDLDMGEIIWNQAVDFGYGFDVFV 121
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
S+++ Y+K +D+A VFD + D+V +MI+GFA G ++ ++ M +
Sbjct: 122 VSSVLNLYAKSGKMDKAKIVFDKMVKRDVVSWTTMITGFAQSGRPLDAIDIYRTMQKERT 181
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D +VGLI G +HG ++ + + + + L+ MYA+ + A
Sbjct: 182 EGDGVVMVGLIQACTSLGDSKFGLSVHGHMVRREMNMDNVLQTSLIDMYAKNGKLELASR 241
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF + + +++W ALI+G++Q G K L ++ G K D V + S L+A A+ N
Sbjct: 242 VFEGIPYKSVISWGALISGFAQNGFANKTLASLVEMQNSGFKPDLVSLISSLSACAQVGN 301
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +HG++++ + L + +AL+DMY+KCG L +F+ + R++I +N++I
Sbjct: 302 LKVGKSLHGHIVKRLY-LDKVSGTALIDMYAKCGALTFARALFDQIEPRDLILWNAMISS 360
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G+HG +A F + E + PD +TF++LL AC H GLV +G+ F + ++ IQ
Sbjct: 361 YGIHGDGIEALSLFLKMKETNITPDHATFASLLSACSHSGLVEEGQYWFHVLIDKSKIQP 420
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+HY MV LL AG +EEAY I S+ A+ ALLS C + N + E+VA ++
Sbjct: 421 SEKHYACMVDLLSRAGQVEEAYQLIESMHIKPGLAIWVALLSGCLNHKNLLIGEMVAKKI 480
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E++P V++SN ++ +WDD R + + G+RK G S V
Sbjct: 481 LESNPDDLGIYVLVSNFFSMAKKWDDAAVFRKIMKNTGMRKVPGYSAV 528
>gi|15222917|ref|NP_175445.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213175|sp|Q9SX45.1|PPR75_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g50270
gi|5734776|gb|AAD50041.1|AC007980_6 Hypothetical protein [Arabidopsis thaliana]
gi|332194410|gb|AEE32531.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 596
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 272/534 (50%), Gaps = 7/534 (1%)
Query: 23 KELHALVAKASLL---RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
K++H L+ + + RD F + L R AR L + S+ LW+S+I +
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHF 77
Query: 80 ALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ N S ++++ R + P T+ + +A + D +F H + GL
Sbjct: 78 SGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF-HAHIVKFGLDS 136
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D ++L++ YS L D A ++FDG D D+V +MI GF G +++ F M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCNCM 256
+ G +E T+V ++ + + G+ +HG L++ D ++ S LV MY +C+C
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ A VF+ + ++VTW+ALI GY Q + K + F ++ + ++SVL+A
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H Y+I++ E++ + L+D+Y KCG L I VFE + E+N+ T+
Sbjct: 317 AHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWT 376
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I G HG+ AF+ F ++ ++P+E TF A+L AC HGGLV +GR +F M
Sbjct: 377 AMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+ ++ K +HY MV L G G LEEA + I +P V GAL C ++ + +L +
Sbjct: 437 FNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKY 496
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A ++ + P +L+N Y+E WD+V ++R + D + K G SW+
Sbjct: 497 AASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L R + +H + K S+ + T L+ LY L A ++F++ +++V+ W ++I
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+A DA LF +L + + P+ T+ + AC+ HGG + G
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA-----------HGGLVEEG 426
>gi|15217514|ref|NP_177305.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169720|sp|Q9C9I6.1|PP116_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g71490
gi|12323739|gb|AAG51835.1|AC016163_24 unknown protein; 40702-42747 [Arabidopsis thaliana]
gi|56381899|gb|AAV85668.1| At1g71490 [Arabidopsis thaliana]
gi|56790238|gb|AAW30036.1| At1g71490 [Arabidopsis thaliana]
gi|332197086|gb|AEE35207.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 681
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/566 (29%), Positives = 283/566 (50%), Gaps = 36/566 (6%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA + + KLV Y+ N+ A+ + + + WN +I +YA
Sbjct: 64 QVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNE 123
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
F + + +K ++ ++PD FTY + +AC E D+ R VHG VS +
Sbjct: 124 LFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCN 183
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML------ 197
AL++ Y + + A ++FD + + D V N++I+ +A G W ++ +LFD M
Sbjct: 184 ALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEV 243
Query: 198 --------------------------RLGKTPDEYTLVGLISGLWEPSLLS---VGQGIH 228
R+ P V +I GL SL+ +G+ IH
Sbjct: 244 SVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIH 303
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
G + SS+D D V + L++MY++C + A VF L TW+++I+GY+Q
Sbjct: 304 GLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSE 363
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSAL 347
+A + R++ + G + + + +AS+L A+ AN+ G H Y+++ F+ M+ ++L
Sbjct: 364 EASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSL 423
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
VD+Y+K G + QV + MS+R+ +TY S+I G G G A F+++ G+ PD
Sbjct: 424 VDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDH 483
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
T A+L AC H LV++G +F +M EYGI+ +H+ MV L G AG L +A I
Sbjct: 484 VTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIH 543
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
++P A LL+ CHI+GN+ + + A +L E P Y V+++N YA G W
Sbjct: 544 NMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSK 603
Query: 528 VMKLRDDIVDNGLRKEAGVSWVSGSS 553
+ ++R + D G++K+ G +W+ S
Sbjct: 604 LAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 110/230 (47%), Gaps = 4/230 (1%)
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
++ L+S + G +H C+ S + + + LV+ Y+ N N A + +
Sbjct: 44 HSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIEN 103
Query: 266 --LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ HP + W+ LI Y++ + + + ++++ +G + D SVL A ++ +V
Sbjct: 104 SDILHP--LPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVA 161
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G V+HG + ++ S+ V +AL+ MY + +G+ ++F+ M ER+ +++N+VI
Sbjct: 162 FGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYA 221
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G +AFE F + G+ T++ + C G + +RM
Sbjct: 222 SEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRM 271
>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
Length = 736
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 286/542 (52%), Gaps = 9/542 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
S + L + + LHA++ + LL D T L+ +YA L AR FD+ ++++ WN
Sbjct: 70 SSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWN 129
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQ---LKPDNFTYACITRACSENSDLPGLRFVHGGA 130
++I Y+ A ++++++ +KPD T++ AC+ D+ R +
Sbjct: 130 ALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEART 189
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ SG DSI +AL+ YSK ++ A KVFD + + D++ N+MISG+A G ++L
Sbjct: 190 VASGYASDSIVQNALINMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQAL 249
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+LF M P+ T +GL++ L G+ IH + ++S + +VL++MY
Sbjct: 250 ELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMY 309
Query: 251 ARCNC-MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
+C+ + A VF + D++TW+ LI Y Q G AL F+++ ++ + + +
Sbjct: 310 TKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITL 369
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
++VL+A A G +H + + V++ ++L++MY++CG L + VF + +
Sbjct: 370 SNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRD 429
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+++++++++I HG + E F +++++GL D+ T + L AC HGG++ +G +
Sbjct: 430 KSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQT 489
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M ++G+ H++ MV LL AG LE A + I +P D +LLS C ++
Sbjct: 490 FLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHN 549
Query: 490 NSDLAEIVAHQLFENDPRKGAYKV-MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
++ A VA +LFE + V +LSN YAE GRWDDV K R+ RK G S+
Sbjct: 550 DTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN---RRAARKNPGCSY 606
Query: 549 VS 550
+
Sbjct: 607 IE 608
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 183/363 (50%), Gaps = 5/363 (1%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
W I+ A+A + +A ++ ++ L+PD + CS + DL + +H +
Sbjct: 26 WTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMIL 85
Query: 132 VSGLGR-DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ L D I +AL+T Y++ ++ A K FD + LV N++I+G++ G +L
Sbjct: 86 ETRLLEFDIILGTALITMYARCRDLELARKTFDEMGKKTLVTWNALIAGYSRNGDHRGAL 145
Query: 191 QLFDWMLRL---GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ M+ G PD T + +S G+ I + S + S V + L+
Sbjct: 146 KIYQDMVSKSPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALI 205
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MY++C + SA VF+ L + D++ W+ +I+GY++QG +AL F+++ K + V
Sbjct: 206 NMYSKCGSLESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVV 265
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC-GYLGLGIQVFET 366
+L A ++ G IH V + G+E +++ + L++MY+KC L QVFE
Sbjct: 266 TFIGLLTACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCSSSLEEARQVFER 325
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M R++IT+N +I+ +G A + F+ + + + P+E T S +L AC G G
Sbjct: 326 MRTRDVITWNILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQG 385
Query: 427 REI 429
+ +
Sbjct: 386 KAV 388
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 139/263 (52%), Gaps = 6/263 (2%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + A VF+++ HP+ V+W+ ++ +++ G Y +AL Y+R++ ++G + D +
Sbjct: 1 MYGKCGSVADALAVFHAIEHPNSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGAM 60
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ + S ++ G ++H +++ E +++ +AL+ MY++C L L + F+ M
Sbjct: 61 FVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCRDLELARKTFDEM 120
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK---GLNPDESTFSALLCACCHGGLVN 424
++ ++T+N++I G +G A + ++D++ K G+ PD TFS+ L AC G ++
Sbjct: 121 GKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGDIS 180
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
GREI R T G + + ++ + G+LE A ++ K D ++S
Sbjct: 181 QGREIEAR-TVASGYASDSIVQNALINMYSKCGSLESARK-VFDRLKNRDVIAWNTMISG 238
Query: 485 CHIYGNSDLAEIVAHQLFENDPR 507
G + A + ++ NDP+
Sbjct: 239 YAKQGAATQALELFQRMGPNDPK 261
>gi|297835788|ref|XP_002885776.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331616|gb|EFH62035.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 277/532 (52%), Gaps = 7/532 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+S+ + +H + AK+ L D L+ Y+ L SA +LF + +S WN++I A
Sbjct: 57 VSQGRSVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGA 116
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+ + +A ++FKN+ ++ T + A + L H + SG+ D
Sbjct: 117 YSQSGLMEEAITVFKNMFEKSVEISPVTIINLLSAHVSHEPL------HCLVVKSGMVND 170
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++LV AYS+ +D A +++ + +V S++S +A G D ++ F M +
Sbjct: 171 ISVVTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQ 230
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
L D LVG++ G S + +G +HG+ +KS V + L++MY++ + + +
Sbjct: 231 LCMKIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVET 290
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK-ADPVLIASVLAAAA 317
+F L L++W+++I+G Q G A F ++ + G D + IAS+LA +
Sbjct: 291 VLFLFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCS 350
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G +HGY +++ FE V +AL+DMY+KCG VF+++ T+NS
Sbjct: 351 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 410
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G L G +A + ++ EKGL PD+ TF +L AC HGG V++G+ F M +E+
Sbjct: 411 MISGYSLSGLQNRALSCYLEMREKGLKPDKITFLGVLSACTHGGFVDEGKIYFRAMIKEF 470
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI +HY MV LLG A EA IW + D AV GALLS C I+ ++ E +
Sbjct: 471 GISPCLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYI 530
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++F D + G V++SN YA + WDDV+++R + DNG GVS +
Sbjct: 531 AKKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRKMMKDNGYDGYLGVSQI 582
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/413 (27%), Positives = 196/413 (47%), Gaps = 16/413 (3%)
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P+R +WN++I Y+ +DA LF +L+ P T + C + + R
Sbjct: 2 PERDTVVWNALICGYSRNGYESDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 61
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VHG A SGL DS +AL++ YSK + +D A +F + D V N+MI ++ G
Sbjct: 62 SVHGIAAKSGLEMDSQVKNALISFYSKCAELDSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISG--LWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++++ +F M T++ L+S EP +H +KS + V
Sbjct: 122 LMEEAITVFKNMFEKSVEISPVTIINLLSAHVSHEP--------LHCLVVKSGMVNDISV 173
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV Y+RC ++SA ++ S +V +++++ Y+++GD A+ YF K+
Sbjct: 174 VTSLVCAYSRCGYLDSAERLYASANQDSIVGLTSIVSSYAEKGDMDIAVVYFSKMRQLCM 233
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D V + +L S+++ G +HGY I+ G +V + L+ MYSK + +
Sbjct: 234 KIDAVALVGILHGCKNSSHIDIGMSLHGYAIKSGLCRKTLVVNGLITMYSKFDDVETVLF 293
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI-IEKGLNPDESTFSALLCACCHGG 421
+F+ + E +I++NSVI G G AFE F + + GL PD T ++LL C
Sbjct: 294 LFQQLQETPLISWNSVISGCVQSGRASTAFEVFHQMKLSGGLLPDAITIASLLAGCSQLC 353
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYSFIWSLPKP 472
+N G+E+ + E+++ ++ + GN +A S S+ P
Sbjct: 354 CLNLGKELHGYTLRN---NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 403
>gi|297843162|ref|XP_002889462.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335304|gb|EFH65721.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 608
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/549 (32%), Positives = 281/549 (51%), Gaps = 7/549 (1%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFD 62
NL+ +L+ + S + HA V K+ L D L+ LY L + R +FD
Sbjct: 61 NLYASLLQTCRKVFSFIHGLQFHAHVVKSGLETDRNVGNSLLSLYFKLGPDMRETRRVFD 120
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ W S++ Y + A +F ++ L+P+ FT + +AC E ++
Sbjct: 121 GMFVKDAISWTSMMSGYVASKEHVKALEVFVEMVSFGLQPNKFTLSSAVKACFELGEVRL 180
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R HG I G + + SS L Y +A +VFD + +PD++ +++S F+
Sbjct: 181 GRCFHGVVITHGFEWNHVISSTLAYMYGVNKEPVDARRVFDEMPEPDVICWTAVLSAFSK 240
Query: 183 CGFWDKSLQLFDWMLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
++++L LF M R G PD T +++ L G+ IHG + + S
Sbjct: 241 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVV 300
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V S L+ MY + + A VFN + ++V+WSAL+ GY Q G++ KA+ FR++
Sbjct: 301 VESSLLDMYGKSGSVREARQVFNGMPRKNIVSWSALLGGYCQNGEHEKAIEMFREM---- 356
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
++ D +VL A A A V G IHG ++ G +V+V SAL+D+Y K G +
Sbjct: 357 EEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDYAS 416
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+V+ MS RN+IT+N+++ L +G +A FF D+++KG+ PD +F A+L AC H G
Sbjct: 417 RVYSKMSVRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAVLTACGHTG 476
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV +GR F M + YGI+ TEHY M+ LLG AG EEA + + D ++ G L
Sbjct: 477 LVEEGRNYFALMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLDRAECRNDASLWGVL 536
Query: 482 LSCCHIYGN-SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
L C + S +AE +A ++ E +P+ V+LSN Y GR D +K+R +V G+
Sbjct: 537 LGPCAANTDASSIAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALKIRKLMVRRGV 596
Query: 541 RKEAGVSWV 549
K G SW+
Sbjct: 597 AKTVGQSWI 605
>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like, partial [Brachypodium distachyon]
Length = 745
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 162/489 (33%), Positives = 261/489 (53%), Gaps = 5/489 (1%)
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGL 123
P RS +N +IR++ A DA LF +L T + PD T A ++CS DL
Sbjct: 131 PPRSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVG 190
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R V A G D ++L+ Y+ + A +F V ++ N+MI+G+
Sbjct: 191 RGVQAYAFKRGFMVDQFVLNSLIHMYASCGDVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G W + +++F ML + DE TL+ + + ++GQ I + + ++
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ LV MYA+C ++ A +F+ + D+V WSA+I+GY+Q +AL F + MQG +
Sbjct: 311 TALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNE--MQGTE 368
Query: 304 ADP--VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+P V + SVL+A A + G +H Y+ + L+V++ +ALVD Y+KCG + +
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ FE+M RN T+ ++I G+ +G + +A E F ++E + P + TF +L AC HG
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV +GR FT MT++YGI + EHY MV LLG AG ++EAY FI ++P + V AL
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
LS C ++ N ++ E Q+ DP ++LSNTYA G+W + +R ++ + G+
Sbjct: 549 LSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVE 608
Query: 542 KEAGVSWVS 550
K G S +
Sbjct: 609 KIPGCSLIE 617
>gi|110738388|dbj|BAF01120.1| hypothetical protein [Arabidopsis thaliana]
Length = 596
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/534 (29%), Positives = 272/534 (50%), Gaps = 7/534 (1%)
Query: 23 KELHALVAKASLL---RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
K++H L+ + + RD F + L R AR L + S+ LW+S+I +
Sbjct: 18 KQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHF 77
Query: 80 ALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ N S ++++ R + P T+ + +A + D +F H + GL
Sbjct: 78 SGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQF-HAHIVKFGLDS 136
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D ++L++ YS L D A ++FDG D D+V +MI GF G +++ F M
Sbjct: 137 DPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMK 196
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCNCM 256
+ G +E T+V ++ + + G+ +HG L++ D ++ S LV MY +C+C
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ A VF+ + ++VTW+ALI GY Q + K + F ++ + ++SVL+A
Sbjct: 257 DDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G +H Y+I++ E++ + L+D+Y KCG L I VFE + E+N+ T+
Sbjct: 317 AHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWT 376
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I G HG+ AF+ F ++ ++P+E TF A+L AC HGGLV +GR +F M
Sbjct: 377 AMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGR 436
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+ ++ K +HY MV L G G LEEA + I +P V GAL C ++ + +L +
Sbjct: 437 FNMELKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKY 496
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A ++ + P +L+N Y+E WD+V ++R + D + K G SW+
Sbjct: 497 AASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L R + +H + K S+ + T L+ LY L A ++F++ +++V+ W ++I
Sbjct: 321 ALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMIN 380
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+A DA LF +L + + P+ T+ + AC+ HGG + G
Sbjct: 381 GFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA-----------HGGLVEEG 426
>gi|357446017|ref|XP_003593286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482334|gb|AES63537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 622
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/535 (31%), Positives = 274/535 (51%), Gaps = 8/535 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH L DP + ++ +YA + SAR +FD P R WNS+I AY
Sbjct: 87 QLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNG 146
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGR--- 137
+A + K+ P A + C DL G R +HG +V G R
Sbjct: 147 LLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDL-GWRIGRQIHGLVVVDGRIRIQH 205
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S+A V Y + A VFD + + V ++ISG A+ +D +L + M
Sbjct: 206 SVFLSTAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQ 265
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC-NCM 256
G +P+ TL+ L++ P + G+ IHG+ + FDS S L+ +Y C +
Sbjct: 266 VEGVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSL 325
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ A +F D+V WS++I Y+++G+ KAL F K+ + + + V + +V++A
Sbjct: 326 HLAERIFEGSSLRDVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISAC 385
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
++ G VIHGY+++ G S+ V +AL++MY+KCG L ++F M R+ +T+N
Sbjct: 386 TNLSSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVTWN 445
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I GLHG+ QA + F ++ E+G+ D TF A+L AC H GLV +G+++F ++ +
Sbjct: 446 SMISAYGLHGYGEQALQHFYEMKERGVKLDAVTFLAVLSACNHAGLVTEGQQLFEQVNAD 505
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
I EHY ++ L G +G LE+A + ++P + +L+S C ++G D+AE
Sbjct: 506 CEIPITIEHYACLIDLHGRSGKLEDALEILRTMPMKPSARIWSSLVSSCKLHGRLDIAES 565
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
++ QL ++P A +LS +AE GRW D+ ++R+ + LRK G S +
Sbjct: 566 LSSQLIRSEPNNAASYTLLSMIHAEKGRWLDIEQVRETMKLQRLRKCYGFSRIEA 620
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 16/191 (8%)
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD--PVLI 309
+CNC++ F S P + S I G Y + L +F +L+ + P ++
Sbjct: 11 QCNCISFITRRFLSSVVPTH-SPSDHIKTLVSMGLYHQTLQFFTQLHFSAHHFNSIPFVL 69
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
SV+ A + + G +H G +VS++++ MY+K + QVF+TM
Sbjct: 70 PSVIKACSFTHFHAFGTQLHCLAFITGSYTDPIVSNSIISMYAKFFDIESARQVFDTMPH 129
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC------------ 417
R+ IT+NS+I +G +A + +D G P ++++ C
Sbjct: 130 RDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFLPKPELLASMVSMCGREMDLGWRIGR 189
Query: 418 -CHGGLVNDGR 427
HG +V DGR
Sbjct: 190 QIHGLVVVDGR 200
>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
Length = 732
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 165/531 (31%), Positives = 275/531 (51%), Gaps = 7/531 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA V + D L+ Y N + + R LFD+ +++ W ++I Y +
Sbjct: 158 KQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGY-MQ 216
Query: 83 HRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ F+ +A LF + R KPD F + +C L R VH I + L +
Sbjct: 217 NSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFV 276
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L+ Y+K +L+ +A KVFD +++ +++ N+MI G++ ++L+LF M
Sbjct: 277 KNGLIDMYAKSNLLXDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLF 336
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P T V L+ L + + IHG +K + S L+ +Y++C+ + A H
Sbjct: 337 PPSLLTFVSLLGVSASLFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARH 396
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF + D+V W+A+ GY+Q + +AL + L +K + A+++ AA+ A+
Sbjct: 397 VFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLAS 456
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G H +++ G + V++ALVDMY+KCG + ++F + R+++ +NS+I
Sbjct: 457 LRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMIST 516
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG +A FR+++++G+ P+ TF A+L AC H G V DG F M +GI+
Sbjct: 517 HAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGXVEDGLNHFNSMP-GFGIKP 575
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA--VSGALLSCCHIYGNSDLAEIVAH 499
TEHY +V LLG +G L EA FI + P++PA V +LLS C I GN +L + A
Sbjct: 576 GTEHYACVVSLLGRSGKLFEAKEFIEKM--PIEPAAIVWRSLLSACRIAGNVELGKYAAE 633
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
DP+ ++LSN +A G W DV K+RD + + + KE G SW+
Sbjct: 634 MAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIE 684
Score = 199 bits (505), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 212/417 (50%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ + +LH V ++ +D + T L+ Y+ N + AR++FD+ +++ W +II
Sbjct: 53 VEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAG 112
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y R + LF + T + PD + + + ACS L G + +H + G D
Sbjct: 113 YTKCGRSXVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMD 172
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ L+ Y+K + + K+FD + +++ +MISG+ F ++++LF M R
Sbjct: 173 VSVVNVLIDFYTKCNRVKAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNR 232
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
LG PD + +++ L G+ +H + +K++ +S ++V + L+ MYA+ N +
Sbjct: 233 LGWKPDGFACTSVLTSCGSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNLLXD 292
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + ++++++A+I GYS Q +AL F ++ ++ + S+L +A
Sbjct: 293 AKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSAS 352
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ IHG +I+ G L + SAL+D+YSKC Y+ VFE M+E++I+ +N++
Sbjct: 353 LFALELSKQIHGLIIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAM 412
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
G H +A + + + P+E TF+AL+ A + + G++ ++ +
Sbjct: 413 FFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVK 469
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 138/262 (52%), Gaps = 6/262 (2%)
Query: 184 GFWDKSLQLF-DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G+ +++L +F D + G+ P+E+ L +I + ++ G +HGF ++S FD YV
Sbjct: 15 GYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYV 74
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+ Y++ + A VF+ L VTW+ +I GY++ G +L F ++
Sbjct: 75 GTSLIDFYSKNGBIEVARLVFDQLLEKTAVTWTTIIAGYTKCGRSXVSLELFAQMRETNV 134
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D +++SVL+A + + G IH YV++ G E+ V V + L+D Y+KC + G +
Sbjct: 135 VPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGTEMDVSVVNVLIDFYTKCNRVKAGRK 194
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ M +NII++ ++I G + F ++A + F ++ G PD +++L +C
Sbjct: 195 LFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSLEA 254
Query: 423 VNDGREIFTRMTEEYGIQAKTE 444
+ GR++ Y I+A E
Sbjct: 255 LEQGRQVHA-----YTIKANLE 271
>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 705
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 171/568 (30%), Positives = 289/568 (50%), Gaps = 40/568 (7%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +S S+ ++LHA V K + L+ +Y+ N+L + LF+ W S
Sbjct: 18 SIKSRSQAQQLHAQVLKFQASSL-CNLSLLLSIYSHINLLHDSLRLFNTIHFPPALAWKS 76
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+IR Y + + F +L + L PD+ + + ++C+ DL +HG I G
Sbjct: 77 VIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVG 136
Query: 135 LGRDSITSSALVTAYSKLSLIDEA--------------------------------IKVF 162
L D T +AL+ YSKL ++E+ K+F
Sbjct: 137 LDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIF 196
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
+ + + DLV N++I+G A G ++++L++ M PD +TL ++ + E +S
Sbjct: 197 EMMPEKDLVSWNTIIAGNARNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDIS 256
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G+ IHG ++ D+ YV+S L+ MYA+C + + VF L D ++W+++I G
Sbjct: 257 RGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERDGISWNSIIAGCV 316
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q G + + L +FR++ M K +S++ A A + G +HGY+ ++GF+ ++
Sbjct: 317 QNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIF 376
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
++S+LVDMY+KCG + Q+F+ M R+++++ ++I+G LHG A E F + +G
Sbjct: 377 IASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG 436
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ A+L AC HGGLV++ + F MT ++GI EHY + LLG AG LEEA
Sbjct: 437 IK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489
Query: 463 YSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAED 522
Y FI + ++ LLS C ++ N D+AE VA+++ E DP ++L+N Y+
Sbjct: 490 YDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAA 549
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
RW + K R + G+RK SW+
Sbjct: 550 RRWKEAAKWRASMRRIGIRKTPACSWIE 577
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 93/188 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L + +SR KE+H + L D + A+ L+ +YA + + +F +R
Sbjct: 245 VLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSCRVFTLLTERD 304
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNSII F++ F+ +L ++KP +++++ I AC+ + L + +HG
Sbjct: 305 GISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHG 364
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+G + +S+LV Y+K I A ++FD + D+V +MI G A G
Sbjct: 365 YITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIMGCALHGQAPD 424
Query: 189 SLQLFDWM 196
+++LF+ M
Sbjct: 425 AIELFEQM 432
>gi|225470674|ref|XP_002269391.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 587
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 269/526 (51%), Gaps = 4/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA V K D F + ++ +YA AR +FD+ ++++ W+++I Y A
Sbjct: 25 LHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGE 84
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A L+ + L P+ + +A + AC+ S + + +H ++ G S S++
Sbjct: 85 PQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNS 141
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y K + +A+ VF +P+ V N++I+GF ++ L+ F M + G PD
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPD 201
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+ +G++ L G +H +K + DS ++ +V+++MY+ N + A F
Sbjct: 202 RFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR 261
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSANVW 323
+ D+++W+ LI S D+ K L F+ + + + D S LAA A A++
Sbjct: 262 LIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMS 321
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH ++++ + V +ALV+MY+KCG +G +F M N++++N++I G G
Sbjct: 322 HGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFG 381
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG +A E F + G+ PD TF LL AC H GLV+ G+ F M E YGI
Sbjct: 382 NHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDI 441
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EH+ ++ +LG AG L EA ++ P DP V +LLS ++G+ + E +A L +
Sbjct: 442 EHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLK 501
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
P + V+LSN YA DG WD V + R + +GL+KE G S +
Sbjct: 502 LQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLI 547
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 169/340 (49%), Gaps = 9/340 (2%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
T + + CS+ L +H + +G D S+ ++ Y+K A +VFD +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ +LV ++MISG+ G ++ L+ M + P+EY +IS S +++GQ
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
IH LK ++S +VS+ L+SMY +CN + A VF + P+ V+++ALITG+ +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
+ L +F+ + QG D VL + N+ GA +H ++ + + + +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK-GLN 404
++ MYS+ + + F + E+++I++N++I + F+ + E+ +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 405 PDESTFSALLCACCHGGLVNDGREIF-----TRMTEEYGI 439
PD+ TF++ L AC ++ G++I TR+ ++ G+
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGV 341
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 163/351 (46%), Gaps = 2/351 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ S +++ +++H+ K F + L+ +Y N A +F TP+ +
Sbjct: 107 VISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPN 166
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I + + FK + + L PD F + + C+ +L +H
Sbjct: 167 CVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHC 226
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ L + ++T YS+L+LI EA K F + + D++ N++I+ +HC K
Sbjct: 227 QTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK 286
Query: 189 SLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
L++F M PD++T ++ + +S G+ IH +++ V + LV
Sbjct: 287 GLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALV 346
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+C C+ AY +F+ + H +LV+W+ +I G+ G +A+ F ++N G + D V
Sbjct: 347 NMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSV 406
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYL 357
+L A + V G + + + +G + S L+DM + G L
Sbjct: 407 TFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRL 457
>gi|222630191|gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
Length = 591
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 271/538 (50%), Gaps = 8/538 (1%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYA-TKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
H ++ + L A LR A LV +YA A +FD+ R WNS
Sbjct: 34 HAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRREDAARVFDEMRVRDAVSWNS 93
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSEN--SDLPGLRFVHGGAI 131
+I A A DA +LF+ +LR+ + D T+ + C+ + LP VHG +
Sbjct: 94 LIAASRGA---GDALALFRRMLRSDARACDRATFTTVLSECARAGAASLPACAMVHGLVV 150
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G + +ALVTAY + A +VF G+++ +++ +MISG A + +S
Sbjct: 151 SCGFEAEVPVGNALVTAYFECGSPASAERVFHGMAEKNVITWTAMISGMARAELYKESFS 210
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF M+R + L++ + GQ +HG +K+ F+ +V S L+ +Y+
Sbjct: 211 LFGQMIRTVDANNATYSCALLACARSLAARE-GQQVHGLVVKAGFEDDLHVESGLMDVYS 269
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C M A VF S PD V + ++ G++Q G KA F ++ G + D +++
Sbjct: 270 KCGLMEDALTVFRSCREPDEVFLTVILVGFAQNGLEEKAFELFAEMVGAGNEIDENTVSA 329
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
VL A SA G IH VI+ F ++ V + LV+MYSKCG L ++VF+ M +N
Sbjct: 330 VLGAFGASAPFALGKQIHALVIKRCFGVNTYVCNGLVNMYSKCGELRESVRVFDEMPSKN 389
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+++NS+I HG + ++ F + G P + TF +LL AC H G G EI
Sbjct: 390 SVSWNSIIAAFARHGHGSEVYQLFESMKADGAKPTDVTFLSLLHACSHVGSAKKGLEILN 449
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M+ +YG+ + EHY +V +LG AG L++A SFI P + + AL+ C +GNS
Sbjct: 450 SMSSQYGVLPRMEHYACVVDMLGRAGLLDDAKSFIEDGPFTDNALLWQALMGACSFHGNS 509
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ + A +L DP A V+LSN Y+ +GRWDD K+ + + GLRK+ G SW+
Sbjct: 510 EVGKYAAEKLLLLDPSCTAAYVLLSNIYSSEGRWDDRAKVMKRMSEMGLRKDTGKSWI 567
>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
Length = 1029
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/536 (29%), Positives = 279/536 (52%), Gaps = 3/536 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL +++H + K S+ D F A ++ +Y+ + A+ LF P + WN++I
Sbjct: 443 SLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIV 502
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A +A + K + + PD ++A ACS + +H +I +
Sbjct: 503 GLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCS 562
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ S+L+ YSK ++ + KV V +V N++I+G D++++LF +L
Sbjct: 563 NHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVL 622
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-LVSMYARCNCM 256
+ G P +T ++SG P +G+ +H + LKS+ + D + LV +Y +C +
Sbjct: 623 KDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLL 682
Query: 257 NSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A + + H +LV W+A I+GY+Q G ++L F ++ ++D ASVL A
Sbjct: 683 EDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKA 742
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIIT 374
++ A + G IHG +I+ GF +SAL+DMYSKCG + ++F E +++NI+
Sbjct: 743 CSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQNIMP 802
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS+I+G +G+ +A F+ + E L PDE T +L AC H GL+++GR +F M+
Sbjct: 803 WNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMS 862
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+ YGI + +HY ++ LLG G+L+EA I LP D + L+ C ++ + +
Sbjct: 863 QVYGIVPRVDHYACLIDLLGRGGHLQEAQEVIDQLPFRADGVIWATFLAACQMHKDEERG 922
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
++ A +L E +P++ + V LS+ +A G W + R+ + + G+ K G SW++
Sbjct: 923 KVAAKKLVEMEPQRSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWIT 978
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 211/431 (48%), Gaps = 1/431 (0%)
Query: 40 YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ 99
Y T + L ++ L AR L + S WN++I +Y+ + ++ L+K++ R
Sbjct: 264 YVTIISTLASMGR-LSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMKRQG 322
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L P T+A + A + + + +H A+ GL + S+L+ Y K I +A
Sbjct: 323 LMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAK 382
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
KVFD ++ ++V+ N+M+ GF ++++Q+F +M R D++T V ++
Sbjct: 383 KVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLD 442
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
L +G+ +H +K+S D+ +V++ ++ MY++ ++ A +F+ + D V+W+ALI
Sbjct: 443 SLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIV 502
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G + + +A+Y +++ G D V A+ + A + G IH I++
Sbjct: 503 GLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCS 562
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ V S+L+D+YSK G + +V + +++ N++I GL + +A E F+ ++
Sbjct: 563 NHAVGSSLIDLYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVL 622
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
+ G P TF+++L C G+++ + + + T I +V + L
Sbjct: 623 KDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLL 682
Query: 460 EEAYSFIWSLP 470
E+A + +P
Sbjct: 683 EDANKLLAEVP 693
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 196/423 (46%), Gaps = 2/423 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S + +++HA K L + F + L+ LY + + A+ +FD + +++
Sbjct: 333 MLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 392
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +WN+++ + + +F+ + R L+ D+FT+ + AC L R VH
Sbjct: 393 IVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHC 452
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + + D ++A++ YSKL ID A +F + D V N++I G AH ++
Sbjct: 453 ITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEE 512
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ + M G PDE + I+ G+ IH +K + S V S L+
Sbjct: 513 AVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLID 572
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+Y++ + S+ V + +V +ALITG Q +A+ F+++ G K
Sbjct: 573 LYSKFGDVESSRKVLAHVDASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFT 632
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVF-ET 366
AS+L+ + G +H Y ++ + +LV +Y KC L ++ E
Sbjct: 633 FASILSGCTGPVSSVIGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEV 692
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+N++ + + I G +G++ Q+ F + + DE+TF+++L AC + DG
Sbjct: 693 PDHKNLVEWTATISGYAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDG 752
Query: 427 REI 429
+EI
Sbjct: 753 KEI 755
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 157/328 (47%), Gaps = 35/328 (10%)
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD F A + ACS L R VH + SG + + LV Y+K + +A +V
Sbjct: 158 PDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRV 217
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FDG++ PD + SMI+G+ G + ++L LF M ++G PD+ T V +IS +L
Sbjct: 218 FDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIIS-----TLA 272
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
S+G+ ++ A + + P V W+A+I+ Y
Sbjct: 273 SMGR------------------------------LSDARTLLKRIQMPSTVAWNAVISSY 302
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
SQ G + ++ + QG AS+L+AAA G IH ++HG + +V
Sbjct: 303 SQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANV 362
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V S+L+++Y K G + +VF+ +E+NI+ +N+++ G + + + F+ +
Sbjct: 363 FVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRA 422
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREI 429
L D+ TF ++L AC + ++ GR++
Sbjct: 423 DLEADDFTFVSVLGACINLDSLDIGRQV 450
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 180/412 (43%), Gaps = 35/412 (8%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +++H V K+ F LV +YA + AR +FD W S+I
Sbjct: 175 ALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIA 234
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y R+ A +LF + + PD TY I + ++ +GR
Sbjct: 235 GYHRVGRYQQALALFSRMEKMGSAPDQVTYVTII------------------STLASMGR 276
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ +A + + P V N++IS ++ G + L+ M
Sbjct: 277 -----------------LSDARTLLKRIQMPSTVAWNAVISSYSQSGLESEVFGLYKDMK 319
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G P T ++S + GQ IH +K D+ +V S L+++Y + C++
Sbjct: 320 RQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCIS 379
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+ ++V W+A++ G+ Q + + F+ + +AD SVL A
Sbjct: 380 DAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACI 439
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G +H I++ + + V++A++DMYSK G + + +F + ++ +++N+
Sbjct: 440 NLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNA 499
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+I+GL + +A + + G+ PDE +F+ + AC + G++I
Sbjct: 500 LIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSFATAINACSNIRATETGKQI 551
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 35/231 (15%)
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+G TPD++ L ++S L G+ +H LKS F S + + LV MYA+C +
Sbjct: 154 IGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKD 213
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + PD + W+++I GY + G Y +AL F ++ G D V +++
Sbjct: 214 ARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTII----- 268
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S L M G L + + + + + +N+V
Sbjct: 269 --------------------------STLASM----GRLSDARTLLKRIQMPSTVAWNAV 298
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
I G + F ++D+ +GL P STF+++L A ++G++I
Sbjct: 299 ISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQI 349
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQR 67
VL+ +L+ KE+H L+ K+ + A+ L+ +Y+ +V+ S I + ++
Sbjct: 739 VLKACSEIAALTDGKEIHGLIIKSGFVSYETAASALMDMYSKCGDVISSFEIFKELKNKQ 798
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
++ WNS+I +A N+A LF+ + +QLKPD T + ACS
Sbjct: 799 NIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPDEVTLLGVLIACS 846
>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
chloroplastic-like [Brachypodium distachyon]
Length = 818
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/510 (32%), Positives = 265/510 (51%), Gaps = 10/510 (1%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ ++A N L +A+ +FD +R+ +W +I Y A + LF ++L +PD
Sbjct: 186 LIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVELFLHMLDDGFEPD 245
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIK 160
++ + + AC+E + + +H A+ GL DS S LV Y+KL + ++ A K
Sbjct: 246 GYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKMERSMEHARK 305
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKS-LQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
VF + +++ ++ISG+ G + + + LF ML P+ T L+ S
Sbjct: 306 VFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYSNLLKACANLS 365
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
G+ IH LK+S + V + LVSMYA CM A F+ L+ ++++ S +
Sbjct: 366 DQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQLYETNILSMSPDVE 425
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
K+ AS+L+AAA + G +H ++ GF
Sbjct: 426 TERNNASCSS------KIEGMDDGVSTFTFASLLSAAASVGLLTKGQKLHALSMKAGFRS 479
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+S++LV MY++CGYL + F+ M + N+I++ S+I GL HG+ QA F D+I
Sbjct: 480 DQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISGLAKHGYAKQALSMFHDMI 539
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+ P++ T+ A+L AC H GLV +G+E F M +++G+ + EHY +V LL +G +
Sbjct: 540 LAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHGLLPRMEHYACIVDLLARSGLV 599
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
EEA FI +P D V LLS C YGN+++ EI A+ + +PR A V+LSN Y
Sbjct: 600 EEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAANHVINLEPRDPAPYVLLSNLY 659
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A+ G WD+V ++R + D L KE G+SW+
Sbjct: 660 ADAGLWDEVARIRSLMRDKNLSKETGLSWM 689
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 209/455 (45%), Gaps = 29/455 (6%)
Query: 23 KELHALVAKASLL-RDPFYATKLVRLYALNNVLPSARILFDK-TPQRSVFLWNSIIRAYA 80
+ LH + ++ +L D A L+ +Y+ + +AR +FD+ R + W ++ A
Sbjct: 60 RALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGVRDLVSWTAM--ASC 117
Query: 81 LAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--- 135
LA + +SL +L L+P+ FT RAC P F G +V G
Sbjct: 118 LARNGAERESLRLLGEMLELGLRPNAFTLCAAARAC-----FPQELFRLAGGVVLGFVLK 172
Query: 136 ----GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G D AL+ +++ + A +VFDG+ + V+ +I+ + G K ++
Sbjct: 173 TGFWGTDVSVGCALIDMFARNGDLVAAQRVFDGLIERTSVVWTLLITRYVQAGCASKVVE 232
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF ML G PD Y++ +IS E + +GQ +H L+ S VS LV MYA
Sbjct: 233 LFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYA 292
Query: 252 RCN---CMNSAYHVFNSLFHPDLVTWSALITGYSQQG-DYGKALYYFRKLNMQGKKADPV 307
+ M A VF ++ ++++W+ALI+GY Q G + FR++ + + + +
Sbjct: 293 KLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHI 352
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+++L A A ++ G IH +V++ +V +ALV MY++ G + + F+ +
Sbjct: 353 TYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEEARKAFDQL 412
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E NI++ + + + E D + TF++LL A GL+ G+
Sbjct: 413 YETNILSMSPDVETERNNASCSSKIEGMDDGVST------FTFASLLSAAASVGLLTKGQ 466
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
++ ++ + G ++ +V + G LE+A
Sbjct: 467 KLHA-LSMKAGFRSDQGISNSLVSMYARCGYLEDA 500
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ ++LHAL KA D + LV +YA L A FD+ +V W SII
Sbjct: 462 LTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSIISG 521
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A A S+F +++ +KP++ TY + ACS
Sbjct: 522 LAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACS 558
>gi|296090287|emb|CBI40106.3| unnamed protein product [Vitis vinifera]
Length = 590
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 160/526 (30%), Positives = 269/526 (51%), Gaps = 4/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA V K D F + ++ +YA AR +FD+ ++++ W+++I Y A
Sbjct: 25 LHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEMFEKNLVSWSAMISGYDQAGE 84
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A L+ + L P+ + +A + AC+ S + + +H ++ G S S++
Sbjct: 85 PQMAIDLYSQMF---LVPNEYVFASVISACASLSAVTLGQKIHSRSLKFGYESISFVSNS 141
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y K + +A+ VF +P+ V N++I+GF ++ L+ F M + G PD
Sbjct: 142 LISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQQLERGLEFFKLMRQQGLIPD 201
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+ +G++ L G +H +K + DS ++ +V+++MY+ N + A F
Sbjct: 202 RFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFR 261
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSANVW 323
+ D+++W+ LI S D+ K L F+ + + + D S LAA A A++
Sbjct: 262 LIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVRPDDFTFTSALAACAGLASMS 321
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH ++++ + V +ALV+MY+KCG +G +F M N++++N++I G G
Sbjct: 322 HGKQIHAHLMRTRLYQDLGVGNALVNMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFG 381
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG +A E F + G+ PD TF LL AC H GLV+ G+ F M E YGI
Sbjct: 382 NHGLGERAVELFEQMNASGIRPDSVTFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDI 441
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EH+ ++ +LG AG L EA ++ P DP V +LLS ++G+ + E +A L +
Sbjct: 442 EHFSCLIDMLGRAGRLNEAEEYMRKFPFWNDPVVLVSLLSASRLHGDVVIGERLAKWLLK 501
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
P + V+LSN YA DG WD V + R + +GL+KE G S +
Sbjct: 502 LQPVTTSPYVLLSNLYASDGMWDSVAEARKRLKGSGLKKEPGHSLI 547
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 169/340 (49%), Gaps = 9/340 (2%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
T + + CS+ L +H + +G D S+ ++ Y+K A +VFD +
Sbjct: 5 TLSSLLHHCSKTKALRCGLSLHAAVLKTGTQSDVFMSNHVLNMYAKCGHTTFARQVFDEM 64
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ +LV ++MISG+ G ++ L+ M + P+EY +IS S +++GQ
Sbjct: 65 FEKNLVSWSAMISGYDQAGEPQMAIDLYSQMFLV---PNEYVFASVISACASLSAVTLGQ 121
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
IH LK ++S +VS+ L+SMY +CN + A VF + P+ V+++ALITG+ +
Sbjct: 122 KIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPNCVSYNALITGFVENQ 181
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
+ L +F+ + QG D VL + N+ GA +H ++ + + + +
Sbjct: 182 QLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHCQTVKLNLDSTPFIGN 241
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK-GLN 404
++ MYS+ + + F + E+++I++N++I + F+ + E+ +
Sbjct: 242 VIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAKGLRVFKHMTEETNVR 301
Query: 405 PDESTFSALLCACCHGGLVNDGREIF-----TRMTEEYGI 439
PD+ TF++ L AC ++ G++I TR+ ++ G+
Sbjct: 302 PDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGV 341
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 163/351 (46%), Gaps = 2/351 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ S +++ +++H+ K F + L+ +Y N A +F TP+ +
Sbjct: 107 VISACASLSAVTLGQKIHSRSLKFGYESISFVSNSLISMYMKCNQCSDALSVFTNTPEPN 166
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I + + FK + + L PD F + + C+ +L +H
Sbjct: 167 CVSYNALITGFVENQQLERGLEFFKLMRQQGLIPDRFAFMGVLGICTTTENLKRGAELHC 226
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ L + ++T YS+L+LI EA K F + + D++ N++I+ +HC K
Sbjct: 227 QTVKLNLDSTPFIGNVIITMYSELNLIQEAEKAFRLIEEKDVISWNTLIAACSHCDDHAK 286
Query: 189 SLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
L++F M PD++T ++ + +S G+ IH +++ V + LV
Sbjct: 287 GLRVFKHMTEETNVRPDDFTFTSALAACAGLASMSHGKQIHAHLMRTRLYQDLGVGNALV 346
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+C C+ AY +F+ + H +LV+W+ +I G+ G +A+ F ++N G + D V
Sbjct: 347 NMYAKCGCIGYAYDIFSKMVHHNLVSWNTIIAGFGNHGLGERAVELFEQMNASGIRPDSV 406
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYL 357
+L A + V G + + + +G + S L+DM + G L
Sbjct: 407 TFIGLLTACNHAGLVDKGQLYFNSMEETYGIAPDIEHFSCLIDMLGRAGRL 457
>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 785
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/553 (30%), Positives = 285/553 (51%), Gaps = 4/553 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F FL L+ S Q+L + +H L D + +T L+ +YA L A+ LF+
Sbjct: 108 FTFPFL-LKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFN 166
Query: 63 KTPQ--RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
R + WN++I A++ + + + P++ T I + + L
Sbjct: 167 SISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANAL 226
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+ +H I + + + +AL+ Y+K L+ A K+F+ V+ + V ++MI G+
Sbjct: 227 HQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGY 286
Query: 181 AHCGFWDKSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+L L+D ML + G P TL ++ + + L G+ +H +KS D
Sbjct: 287 VLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLD 346
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
V + L+SMYA+C M++A + + D V++SA+I+G Q G KAL FR++
Sbjct: 347 TTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQS 406
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G + ++L A + A + G HGY + GF + +A++DMYSKCG + +
Sbjct: 407 SGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITI 466
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++F+ M R+II++N++I+G G+HG +A F+++ GL PD+ T A+L AC H
Sbjct: 467 SREIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSH 526
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV +G+ F+ M++ + I+ + HYI MV LL AGNL+EAY+FI +P + + G
Sbjct: 527 SGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWG 586
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
ALL+ C + N ++ E V+ ++ P V++SN Y+ GRWDD +R +G
Sbjct: 587 ALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHG 646
Query: 540 LRKEAGVSWVSGS 552
+K G SWV S
Sbjct: 647 YKKSPGCSWVEIS 659
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 143/488 (29%), Positives = 235/488 (48%), Gaps = 47/488 (9%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
AT+L R + N + AR +FD+ P+ SV LWN +IR YA + F + L+ ++L+ +
Sbjct: 44 ATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGV 103
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
P NFT+ + +ACS L R +H A + GL D S+AL+ Y+K + +A
Sbjct: 104 TPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQT 163
Query: 161 VFDGVS--DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F+ +S D D+V N+MI+ F+ +++ M + G TP+ TLV ++ + +
Sbjct: 164 LFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQA 223
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+ L G+ IH + +++ F + + L+ MYA+C+ + A +FN++ + V WSA+I
Sbjct: 224 NALHQGKAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMI 283
Query: 279 TGYSQQGDYGKAL-YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
GY AL Y L + G P +A++L A A+ ++ G +H ++I+ G
Sbjct: 284 GGYVLHDSISDALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGM 343
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+L V ++L+ MY+KCG + + + M ++ ++Y+++I G +G+ +A FR
Sbjct: 344 DLDTTVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQ 403
Query: 398 IIEKGLNPDESTFSALLCA-----------CCHG-----GLVND---------------- 425
+ G+ P T ALL A CCHG G ND
Sbjct: 404 MQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGK 463
Query: 426 ---GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP----KPVDPAVS 478
REIF RM I T M+ G+ G EA S L KP D +
Sbjct: 464 ITISREIFDRMQNRDIISWNT-----MIIGYGIHGLCVEALSLFQELQALGLKPDDVTLI 518
Query: 479 GALLSCCH 486
L +C H
Sbjct: 519 AVLSACSH 526
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 2/192 (1%)
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
D ++ L + N + A HVF+ + P +V W+ +I Y+ G + +++Y + +
Sbjct: 41 DAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQ 100
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G +L A + + G +IH + G + + VS+AL+ MY+KCG+L
Sbjct: 101 LGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ 160
Query: 360 GIQVFETMS--ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+F ++S +R+I+ +N++I H Q + + G+ P+ ST ++L
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTI 220
Query: 418 CHGGLVNDGREI 429
++ G+ I
Sbjct: 221 GQANALHQGKAI 232
>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
Length = 695
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 164/564 (29%), Positives = 292/564 (51%), Gaps = 36/564 (6%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQRSVFLWNSII 76
S + +HA + K L + +KL+ L+ + LP A +F+ + ++ +WN++
Sbjct: 1 SSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWNTMF 60
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R +AL+ A L+ ++ L P+ +T+ + ++C+++ + +HG + G
Sbjct: 61 RGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYD 120
Query: 137 -------------------------------RDSITSSALVTAYSKLSLIDEAIKVFDGV 165
RD ++ +AL+T Y+ I A K+FD +
Sbjct: 121 LDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEI 180
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
D+V N+MISG+A G ++L+LF M++ PDE T+V ++S + + + +G+
Sbjct: 181 PIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGR 240
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
+H + F S + + L+ +Y +C + +A +F L + D+++W+ LI GY+
Sbjct: 241 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMN 300
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH--GFELSVMV 343
Y +AL F+++ G+ + V + S+L A A + G IH Y+ + G +
Sbjct: 301 LYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSH 360
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
++L+DMY+KCG + QVF+++ R++ ++N++I G +HG AF+ F + + +
Sbjct: 361 RTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEI 420
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
PD+ TF LL AC H G+++ GR IF M E+Y I K EHY M+ LLG +G +EA
Sbjct: 421 EPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDYKITPKLEHYGCMIDLLGHSGLFKEAE 480
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDG 523
I ++ D + +LL C ++GN +L E A L + +P+ V+LSN YA G
Sbjct: 481 EMINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPKNPGSYVLLSNIYATAG 540
Query: 524 RWDDVMKLRDDIVDNGLRKEAGVS 547
RW++V K+R + D G++K G S
Sbjct: 541 RWNEVAKIRALLNDKGMKKVPGCS 564
>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
Length = 822
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/518 (32%), Positives = 266/518 (51%), Gaps = 16/518 (3%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + L+ + A N L SAR +FD +++V +W +I Y +A +F + L
Sbjct: 187 DIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIFLDFL 246
Query: 97 RTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL- 154
+PD +T + + AC+E S GL+ H A+ G D+ S LV Y+K ++
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQL-HSLALRMGFASDACVSCGLVDMYAKSNIE 305
Query: 155 --IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD-KSLQLFDWMLRLGKTPDEYTLVGL 211
+D A KVF+ + D++ ++ISG+ G + K + LF ML P+ T +
Sbjct: 306 QAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITYSSI 365
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+ S G+ +H +KS+ + V + LVSMYA CM A VFN L+ +
Sbjct: 366 LKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
+ S + G D+ ++ AS+++AAA + G +H
Sbjct: 426 I--SCITEGRDAPLDH--------RIGRMDMGISSSTFASLISAAASVGMLTKGQQLHAM 475
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
++ GF VS++LV MYS+CGYL + F + +RN+I++ S+I GL HG+ +A
Sbjct: 476 TLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
F D+I G+ P++ T+ A+L AC H GLV +G+E F M ++G+ + EHY MV
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
LL +G ++EA FI +P D V LL C + N ++ EI A + E +PR A
Sbjct: 596 LLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPRDPAP 655
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN YA+ G WD+V ++R + DN L KE G+SW+
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWM 693
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 208/453 (45%), Gaps = 29/453 (6%)
Query: 23 KELHALVAKASLL-RDPFYATKLVRLYALNNVLPSARILFDKTPQ-RSVFLWNSIIRAYA 80
+ LH + + LL RD A L+ LY+ + SAR +FD R + W ++ A
Sbjct: 68 RALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLA 127
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS------G 134
++ L +L + L P+ +T + AC P + G +V G
Sbjct: 128 RNGAERESLLLIGEMLESGLLPNAYTLCAVAHAC-----FPHELYCLVGGVVLGLVHKMG 182
Query: 135 L-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
L G D SAL+ ++ + A KVFDG+ + +V+ +IS + ++++++F
Sbjct: 183 LWGTDIAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEIF 242
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
L G PD YT+ +IS E + +G +H L+ F S VS LV MYA+
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAKS 302
Query: 254 N---CMNSAYHVFNSLFHPDLVTWSALITGYSQQG-DYGKALYYFRKLNMQGKKADPVLI 309
N M+ A VF + D+++W+ALI+GY Q G K + F ++ + K + +
Sbjct: 303 NIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHITY 362
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+S+L A A ++ G +H +VI+ + V +ALV MY++ G + +VF + E
Sbjct: 363 SSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
R++I+ + G + I + STF++L+ A G++ G+++
Sbjct: 423 RSMIS--CITEG--------RDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQL 472
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
MT + G + +V + G LE+A
Sbjct: 473 HA-MTLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ ++LHA+ KA D F + LV +Y+ L A F++ R+V W S+I
Sbjct: 466 LTKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A A SLF +++ T +KP++ TY + ACS
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACS 562
>gi|359490816|ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Vitis vinifera]
Length = 702
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 172/590 (29%), Positives = 286/590 (48%), Gaps = 52/590 (8%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L +S ++L+ K++HA K F TKL+++Y L A ++F K PQR+++
Sbjct: 68 LLESCRTLNLGKQVHAHTLKTGFHGHEFVETKLLQMYGRFGCLDDANLVFVKMPQRNLYS 127
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
W +I+ + F +A SLF+ L + + F + + + C L R +HG I
Sbjct: 128 WTAILSVHVDHGYFEEALSLFEKLQLDDIGLEFFVFPVVLKLCGGLRVLELGRQLHGVVI 187
Query: 132 ------------VSGLGRDSITS-SALVTAYSKLSLIDEAIKVFDGVS--DPDLVLCNSM 176
SG ++ S + ++ Y + +++A ++FD + D + NSM
Sbjct: 188 KRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKELFDQMELVGKDTISWNSM 247
Query: 177 ISGFAHCGFWDKSLQLF-DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
ISG+A +D++L +F D ++ G D +TL +++ + + L G+ +H +
Sbjct: 248 ISGYADNLLFDEALSMFRDLLMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRG 307
Query: 236 FDSYDYVSSVLVSMYARC---------------------NCMNSAYHVFNSL-------- 266
+V LV MY++C N + S Y N L
Sbjct: 308 LHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQ 367
Query: 267 ------FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
F P++ TW+ +I+G+ + G AL F ++ + D + +L A A+ A
Sbjct: 368 KMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTSSLRPDIYTVGIILPACARLA 427
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G +H + I+ G+EL V + +ALVDMY+KCG + +QV+ +S N+++ N+++
Sbjct: 428 TIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLT 487
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
+HG + FR+++ G PD TF ++L +C H G V G E F MT Y +
Sbjct: 488 AYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHAGAVETGHEFFDLMT-YYNVT 546
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+HY +V LL AG L+EAY + +P+ D + GALL C I+GN +L EI A
Sbjct: 547 PSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGGCVIWGNVELGEIAAES 606
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P V+L+N YA GRW D+ + R I D G+ K G SW+
Sbjct: 607 LIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGMHKSPGCSWIE 656
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 133/316 (42%), Gaps = 52/316 (16%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL SL R KE+HA L + F LV +Y+ L +A++ FD +R
Sbjct: 283 VLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCEDLKAAQLAFDGVTERD 342
Query: 69 VFLWNSIIRAYALAHRFNDAKS-----------------------------------LFK 93
WN +I YA ++ + ++ LF
Sbjct: 343 TATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFT 402
Query: 94 NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
+ + L+PD +T I AC+ + + + VH +I G D +ALV Y+K
Sbjct: 403 EMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCG 462
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
I A++V++ +S+P+LV N+M++ +A G D+ + LF ML G PD T + ++S
Sbjct: 463 SIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLS 522
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--------SVLVSMYARCNCMNSAYHVFNS 265
+ G H F FD Y + + +V + +R ++ AY +
Sbjct: 523 SCVHAGAVETG---HEF-----FDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKK 574
Query: 266 L-FHPDLVTWSALITG 280
+ PD V W AL+ G
Sbjct: 575 IPRKPDSVMWGALLGG 590
>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
Length = 671
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/527 (29%), Positives = 281/527 (53%), Gaps = 33/527 (6%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
LP A +F+ + + +WN++IR +AL+ + +L+ ++ L P+++T+ + ++
Sbjct: 14 LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73
Query: 114 CSENSDLPGLRFVHGGAIVSGLG-------------------------------RDSITS 142
C+++ + +HG + G RD ++
Sbjct: 74 CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVVSY 133
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+T Y+ I A K+FD + D+V N+MISG+A G + ++L+LF+ M+++
Sbjct: 134 TALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMNVR 193
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PDE T V ++S + +G+ +H + FDS + + L+ +Y++C + +A +
Sbjct: 194 PDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETACGL 253
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F L + D+++W+ LI GY+ Y +AL F+++ G+ + V + SVL A A +
Sbjct: 254 FQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHLGAI 313
Query: 323 WPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G IH Y+ + G + + ++L+DMY+KCG + QVF +M +++ ++N++I
Sbjct: 314 DIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 373
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +HG +F+ F + + G+ PD+ TF LL AC H G+++ GR IF MT++Y +
Sbjct: 374 GFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDYKMT 433
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
K EHY M+ LLG +G +EA I ++ D + +LL C ++GN +LAE A
Sbjct: 434 PKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESFAQN 493
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
L + +P + ++LSN YA GRW+DV ++R + ++K G S
Sbjct: 494 LIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCS 540
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 191/384 (49%), Gaps = 8/384 (2%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD T L+ YA + SA+ LFD+ P + V WN++I YA + +A LF+ +
Sbjct: 128 RDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEM 187
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
++ ++PD TY + AC+ + + R VH G + +AL+ YSK +
Sbjct: 188 MKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEV 247
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+ A +F G+S D++ N++I G+ H + ++L LF MLR G+TP++ T++ ++
Sbjct: 248 ETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPAC 307
Query: 216 WEPSLLSVGQGIHGFCLK--SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
+ +G+ IH + K + + + L+ MYA+C + +A+ VFNS+ H L +
Sbjct: 308 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 367
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+A+I G++ G + F ++ G + D + +L+A + S + G I +
Sbjct: 368 WNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMT 427
Query: 334 QHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQ 390
Q ++++ + ++D+ G ++ TM E + + + S++ +HG
Sbjct: 428 Q-DYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVEL 486
Query: 391 AFEFFRDIIEKGLNPDESTFSALL 414
A F +++I+ + P+ + LL
Sbjct: 487 AESFAQNLIK--IEPENPSSYILL 508
>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
Length = 687
Score = 279 bits (713), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/534 (29%), Positives = 274/534 (51%), Gaps = 2/534 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + K +H+ V ++ D F T LV Y L AR +FD P RSV WNS+I
Sbjct: 25 ALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 84
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY+++ R +A +F+ + + D T+ I AC +L + V +
Sbjct: 85 AYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPENLQHGKHVRESISETSFEL 144
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D +AL+T Y++ + A +VF + +L+ +++I+ FA G ++L+ F M
Sbjct: 145 DLFVGTALITMYARCRSPENAAQVFGRMKQKNLITWSAIITAFADHGHCGEALRYFRMMQ 204
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC-- 255
+ G P+ T + L++G PS L IH + D +S+ LV++Y RC
Sbjct: 205 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMSNALVNVYGRCETGE 264
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ A + + + W+ LI GY+ G +AL +++L ++ D V SVL A
Sbjct: 265 LDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQRLQLEAIPVDKVTFISVLNA 324
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
S ++ G +IH ++ G + V+V +AL +MYSKCG + ++F++M R+ +++
Sbjct: 325 CTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPIRSAVSW 384
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N ++ HG + + + R + ++G+ + TF ++L +C H GL+ +G + F +
Sbjct: 385 NGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGH 444
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+ GI+ KTEHY +V LLG AG L+EA +I +P + +LL C ++ + D +
Sbjct: 445 DRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPSEPEIVTWASLLGACRVHKDLDRGK 504
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ A +L E DP + V+LSN Y+E G W + KLR + ++K G+S +
Sbjct: 505 LAARKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISSI 558
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 185/378 (48%), Gaps = 3/378 (0%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+L +K + T+ + + + L +F+H S D ++ALV Y+K
Sbjct: 1 MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+ +A KVFDG+ + NSMIS ++ ++ +F M G+ D T + ++
Sbjct: 61 LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILDA 120
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
P L G+ + ++SF+ +V + L++MYARC +A VF + +L+TW
Sbjct: 121 CVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKNLITW 180
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
SA+IT ++ G G+AL YFR + +G + V S+L + + + IH + +
Sbjct: 181 SAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITE 240
Query: 335 HGFELSVMVSSALVDMYSKC--GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
HG + + +S+ALV++Y +C G L + + + M E+ I +N +I G LHG + +A
Sbjct: 241 HGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREAL 300
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
E ++ + + + D+ TF ++L AC + +G+ I + E G+ + + +
Sbjct: 301 ETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV-ECGLDSDVIVKNALTNM 359
Query: 453 LGLAGNLEEAYSFIWSLP 470
G++E A S+P
Sbjct: 360 YSKCGSMENARRIFDSMP 377
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 191/411 (46%), Gaps = 8/411 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + ++L K + +++ S D F T L+ +YA +A +F + Q++
Sbjct: 117 ILDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQKN 176
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W++II A+A +A F+ + + + P+ T+ + + S L L +H
Sbjct: 177 LITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL 236
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSL--IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
GL + S+ALV Y + +D A + + + + N +I+G+ G
Sbjct: 237 LITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRS 296
Query: 187 DKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++L+ + L+L P D+ T + +++ + L+ G+ IH ++ DS V +
Sbjct: 297 REALETYQ-RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA 355
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L +MY++C M +A +F+S+ V+W+ ++ Y+Q G+ + L RK+ +G K +
Sbjct: 356 LTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLN 415
Query: 306 PVLIASVLAAAAKSANVWPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ SVL++ + + + G H G E+ LVD+ + G L +
Sbjct: 416 GITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYI 475
Query: 365 ETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
M SE I+T+ S++ +H + R ++E L+P S+ S +L
Sbjct: 476 SKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLE--LDPGNSSASVVL 524
>gi|125561353|gb|EAZ06801.1| hypothetical protein OsI_29045 [Oryza sativa Indica Group]
Length = 696
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 276/532 (51%), Gaps = 7/532 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L +L K+ L + F A+ L+ +YA + AR +FD P+R+ WN++I Y +
Sbjct: 114 QLQSLALKSGLANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESG 173
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF + R L PD T+A + A E + +HG + G +
Sbjct: 174 DMASALELFLEMEREGLVPDEATFASLLTAV-EGPSCFLMHQLHGKIVKYGSALGLTVLN 232
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GK 201
A +TAYS+ + ++ ++FDG+ D DL+ N+M+ + H G D++++ F M++ G
Sbjct: 233 AAITAYSQCGSLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGV 292
Query: 202 TPDEYTLVGLISGLWEPSLLS-VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN---CMN 257
PD Y+ +IS E G+ IHG +KS+ + V + L++MY R N M
Sbjct: 293 HPDMYSFTSIISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMME 352
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY FNSL D V+W++++TGYSQ G AL +FR + + + D ++ L +++
Sbjct: 353 DAYKCFNSLVLKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSS 412
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ A + G IHG VI GF + VSS+L+ MYSK G + + FE + + + +N+
Sbjct: 413 ELAVLQLGKQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNA 472
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G HG F +++++ D TF L+ +C H GLV++G EI M +Y
Sbjct: 473 MIFGYAQHGQAENVDILFNEMLQRKAPLDHITFVGLITSCSHAGLVDEGSEILNTMETKY 532
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G+ + EHY V L G AG L++A I S+P D V LL C I+GN +LA V
Sbjct: 533 GVPLRMEHYACGVDLYGRAGQLDKAKKLIDSMPFEPDAMVWMTLLGACRIHGNVELASDV 592
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A LF +PR+ + V+LS+ Y+ G W D ++ + GL K G S +
Sbjct: 593 ASHLFVAEPRQHSTYVLLSSMYSGLGMWSDRATVQRVMKKRGLSKVPGWSLI 644
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 210/421 (49%), Gaps = 25/421 (5%)
Query: 27 ALVAKASLLRDPFYA----TKLVRLYALNNV--LPSARILFDKTPQRSVFLWNSIIRAYA 80
A + ASLL+ F A +L+ Y+ ++ L +AR +FD+ P+R WN+++ A+A
Sbjct: 10 AARSHASLLKSGFAAPTPWNQLLTAYSRSSPDGLAAARRVFDEVPRRDEVSWNALLAAHA 69
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTY------ACITRACSENSDLPGLRFVHGGAIVSG 134
+ +A L + + L + F A + R + + L L A+ SG
Sbjct: 70 ASGAHPEAWRLLRAMHAQGLASNTFALGSALRSAAVARRPAIGAQLQSL------ALKSG 123
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L + +SAL+ Y+K + +A +VFDG+ + + V N++I+G+ G +L+LF
Sbjct: 124 LANNVFAASALLDVYAKCGRVRDARQVFDGMPERNTVSWNALIAGYTESGDMASALELFL 183
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M R G PDE T L++ + PS + Q +HG +K V + ++ Y++C
Sbjct: 184 EMEREGLVPDEATFASLLTAVEGPSCFLMHQ-LHGKIVKYGSALGLTVLNAAITAYSQCG 242
Query: 255 CMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYF-RKLNMQGKKADPVLIASV 312
+ + +F+ + DL++W+A++ Y+ G +A+ +F R + G D S+
Sbjct: 243 SLKDSRRIFDGIGDIRDLISWNAMLGAYTHNGMDDEAMKFFVRMMQESGVHPDMYSFTSI 302
Query: 313 LAAAAKSA-NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG---YLGLGIQVFETMS 368
+++ ++ + G VIHG VI+ E V +AL+ MY++ + + F ++
Sbjct: 303 ISSCSEHGHDDHQGRVIHGLVIKSALEGVTPVCNALIAMYTRYNENCMMEDAYKCFNSLV 362
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++ +++NS++ G HG + A +FFR + + + DE FSA L + ++ G++
Sbjct: 363 LKDTVSWNSMLTGYSQHGLSADALKFFRCMCSENVRTDEYAFSAALRSSSELAVLQLGKQ 422
Query: 429 I 429
I
Sbjct: 423 I 423
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 49/93 (52%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H LV + + F ++ L+ +Y+ + ++ AR F++ + S WN++I YA
Sbjct: 421 KQIHGLVIHSGFASNDFVSSSLIFMYSKSGIIDDARKSFEEADKSSSVPWNAMIFGYAQH 480
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ + LF +L+ + D+ T+ + +CS
Sbjct: 481 GQAENVDILFNEMLQRKAPLDHITFVGLITSCS 513
>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 741
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 166/578 (28%), Positives = 301/578 (52%), Gaps = 38/578 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQ 66
L L + ++L + +HA + K L + +KL+ L ++ + LP A +F+ +
Sbjct: 37 LSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQE 96
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
++ +WN++ R +AL+ A L+ ++ L P+++T+ + ++C+++ + +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQI 156
Query: 127 HGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLI 155
HG + G RD ++ +AL+ Y+ I
Sbjct: 157 HGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYI 216
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+ A K+FD + D+V N+MISG+A G + ++L+LF M++ PDE T+V ++S
Sbjct: 217 ESAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSAC 276
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ + +G+ +H + F S + + L+ +Y++C + +A +F L + D+++W+
Sbjct: 277 AQSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWN 336
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV--- 332
LI GY+ Y +AL F+++ G++ + V + S+L A A + G IH Y+
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
++ S + +S L+DMY+KCG + QVF ++ +++ ++N++I G +HG AF
Sbjct: 397 LKSATNASSLRTS-LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
+ F + + G+ PD+ TF LL AC G+++ GR IF MT++Y I K EHY M+ L
Sbjct: 456 DIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDL 515
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG +G +EA I ++ D + +LL C I GN +L E A L + +P
Sbjct: 516 LGHSGLFKEAEEMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCY 575
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+LSN YA GRW++V K+R + D G++K G S +
Sbjct: 576 VLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIE 613
>gi|242095158|ref|XP_002438069.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
gi|241916292|gb|EER89436.1| hypothetical protein SORBIDRAFT_10g007640 [Sorghum bicolor]
Length = 563
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 160/510 (31%), Positives = 263/510 (51%), Gaps = 1/510 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
+TKLV Y+ + +AR +FD P RSV W +++ YA R +A LF +LR+
Sbjct: 54 STKLVMFYSHFGDVAAARAVFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSGA 113
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+P+ FT+ RAC+ VH A D SAL+ + + + +A +
Sbjct: 114 RPNQFTFGSAARACAGGRCARSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARR 173
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
+F + DLV N+++ GF G + +L LF MLR G PD +T + S+
Sbjct: 174 LFAEMERKDLVSWNALMRGFVERGHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISV 233
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ + IH +K + ++ L+ YA+C ++SA +++S+ PDLV+ +ALI+
Sbjct: 234 IFNVELIHTCIIKLGYWDEKVATASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISD 293
Query: 281 YSQQGDYGK-ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
+S +Y + A+ F K++ +G + D +L++++L A A++ G IH Y+ +
Sbjct: 294 HSMDRNYSEDAMKLFCKIHREGLRIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMG 353
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ + +ALVDMY+K G + F+ M RN+I++ S+I HGF A F +
Sbjct: 354 DLALDNALVDMYAKSGEYLDSRRAFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARME 413
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
E G+ P++ TF +LL AC H G++N G E FT M +YGI + +HY + LL G L
Sbjct: 414 EDGVKPNDVTFLSLLSACSHSGMMNKGMEYFTSMMNKYGIDPRAKHYSSAIDLLARGGQL 473
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
E+A+ + ++ GA+L C ++GN L E A+ LF DP+ +L+N Y
Sbjct: 474 EDAWMLLQKTNTECKSSMYGAMLGACKVHGNIPLGETAANNLFSIDPKSSVNYAVLANMY 533
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
AE W+D + R + + KE G S +
Sbjct: 534 AESCLWEDAQRTRKLLAETSKGKEVGFSVI 563
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 175/367 (47%), Gaps = 3/367 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++HA AK D F + L+ ++ + AR LF + ++ + WN+++R +
Sbjct: 137 EQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDARRLFAEMERKDLVSWNALMRGFVER 196
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++DA LF ++LR + PD+FT+ +AC S + + +H I G + + +
Sbjct: 197 GHYSDALGLFASMLRDGMLPDHFTFGSALKACGAISVIFNVELIHTCIIKLGYWDEKVAT 256
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGFWDKSLQLFDWMLRLGK 201
++L+ +Y+K + A ++D + +PDLV ++IS + + + +++LF + R G
Sbjct: 257 ASLIDSYAKCRSLSSARVIYDSICEPDLVSSTALISDHSMDRNYSEDAMKLFCKIHREGL 316
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D L L+ + + G IH + K + + LV MYA+ +
Sbjct: 317 RIDGILLSALLGVCANVASIKFGTQIHAYMHKKQPMGDLALDNALVDMYAKSGEYLDSRR 376
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F+ + ++++W++LIT +Q G A+ F ++ G K + V S+L+A + S
Sbjct: 377 AFDEMPSRNVISWTSLITACAQHGFGEDAVTLFARMEEDGVKPNDVTFLSLLSACSHSGM 436
Query: 322 VWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGIQVFE-TMSERNIITYNSVI 379
+ G ++ ++G + S+ +D+ ++ G L + + T +E Y +++
Sbjct: 437 MNKGMEYFTSMMNKYGIDPRAKHYSSAIDLLARGGQLEDAWMLLQKTNTECKSSMYGAML 496
Query: 380 LGLGLHG 386
+HG
Sbjct: 497 GACKVHG 503
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 89/177 (50%)
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
++S+ LV Y+ + +A VF+ + H +V+W+A+++GY++ G +AL F +
Sbjct: 52 HLSTKLVMFYSHFGDVAAARAVFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRS 111
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + + S A A G +H + + V SAL+DM+ +CG +G
Sbjct: 112 GARPNQFTFGSAARACAGGRCARSGEQVHACAAKGRHAGDMFVQSALMDMHLRCGSVGDA 171
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++F M ++++++N+++ G G A F ++ G+ PD TF + L AC
Sbjct: 172 RRLFAEMERKDLVSWNALMRGFVERGHYSDALGLFASMLRDGMLPDHFTFGSALKAC 228
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%)
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+S+ LV YS G + VF+ M R+++++ +++ G +G +A E F ++ G
Sbjct: 53 LSTKLVMFYSHFGDVAAARAVFDGMPHRSVVSWTAMVSGYAKNGRAPEALELFALMLRSG 112
Query: 403 LNPDESTFSALLCACCHGGLVNDGREI 429
P++ TF + AC G G ++
Sbjct: 113 ARPNQFTFGSAARACAGGRCARSGEQV 139
>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
Length = 822
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 172/518 (33%), Positives = 266/518 (51%), Gaps = 16/518 (3%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + L+ + A N L SAR +FD +++V +W +I Y +A LF + L
Sbjct: 187 DVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELFLDFL 246
Query: 97 RTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL- 154
+PD +T + + AC+E S GL+ H A+ GL D+ S LV Y+K ++
Sbjct: 247 EDGFEPDRYTMSSMISACTELGSVRLGLQL-HSLALRMGLASDACVSCGLVDMYAKSNIG 305
Query: 155 --IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD-KSLQLFDWMLRLGKTPDEYTLVGL 211
+D A KVF+ + D++ ++ISG+ G + K + LF ML P+ T +
Sbjct: 306 QAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITYSSI 365
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+ S G+ +H +KS+ S V + LVSMYA CM A VFN L+ +
Sbjct: 366 LKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYERSM 425
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
+ IT G+ ++ AS+++AAA + G +H
Sbjct: 426 IP---CIT-------EGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQLHAM 475
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
++ GF VS++LV MYS+CGYL + F + +RN+I++ S+I GL HG+ +A
Sbjct: 476 SLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGYAERA 535
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
F D+I G+ P++ T+ A+L AC H GLV +G+E F M ++G+ + EHY MV
Sbjct: 536 LSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYACMVD 595
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
LL +G ++EA FI +P D V LL C + N ++ EI A + E +PR A
Sbjct: 596 LLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPRDPAP 655
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN YA+ G WD+V ++R + DN L KE G+SW+
Sbjct: 656 YVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWM 693
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 206/453 (45%), Gaps = 29/453 (6%)
Query: 23 KELHALVAKASLL-RDPFYATKLVRLYALNNVLPSARILFDKTPQ-RSVFLWNSIIRAYA 80
+ LH + + LL RD A L+ LY+ + SAR +FD R + W ++ A
Sbjct: 68 RALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAMASCLA 127
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS------G 134
+ L +L + L P+ +T AC P + G +V G
Sbjct: 128 RNGAERGSLLLIGEMLESGLLPNAYTLCAAAHAC-----FPHELYCLVGGVVLGLVHKMG 182
Query: 135 L-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
L G D SAL+ ++ + A KVFDG+ + +V+ +IS + +++++LF
Sbjct: 183 LWGTDVAVGSALIDMLARNGDLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVELF 242
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
L G PD YT+ +IS E + +G +H L+ S VS LV MYA+
Sbjct: 243 LDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAKS 302
Query: 254 N---CMNSAYHVFNSLFHPDLVTWSALITGYSQQG-DYGKALYYFRKLNMQGKKADPVLI 309
N M+ A VF + D+++W+ALI+GY Q G K + F ++ + K + +
Sbjct: 303 NIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHITY 362
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+S+L + A ++ G +H +VI+ + V +ALV MY++ G + +VF + E
Sbjct: 363 SSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLYE 422
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
R++I + G + F I+ + STF++L+ A G++ G+++
Sbjct: 423 RSMIP--CITEG--------RDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQL 472
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
M+ + G + +V + G LE+A
Sbjct: 473 HA-MSLKAGFGSDRFVSNSLVSMYSRCGYLEDA 504
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ ++LHA+ KA D F + LV +Y+ L A F++ R+V W S+I
Sbjct: 466 LTKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISG 525
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A A SLF +++ T +KP++ TY + ACS
Sbjct: 526 LAKHGYAERALSLFHDMILTGVKPNDVTYIAVLSACS 562
>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
Length = 690
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 175/549 (31%), Positives = 275/549 (50%), Gaps = 13/549 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S SL +LHA + K D L+ +YA L A +FD P+R+
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +++ + + LF + + P+ FT + +AC + G++ +HG
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTR-AGVQ-IHG 127
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G + +++LV YSK +A +VFD + +L NSMISG+AH G
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 189 SLQLFDWMLRL-GKTPDEYTLVGLI---SGL---WEPSLLSVGQGIHGFCLKSSFDSYDY 241
SL +F M R + PDE+T L+ SGL E + + + G S S
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV----SPASNAI 243
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
++ L+ +Y +C+ + A VF+ L + + W+ +I G++Q+G +A+ FR+ G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+AD +++SV+A A A V G +H Y + L V V+++LVDMY KCG G
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ F M RN++++ ++I G+G HG +A + F ++ E+G+ DE + ALL AC H G
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACSHSG 423
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV++ R F+R+ ++ ++ K EHY MV LLG AG L EA I S+P V L
Sbjct: 424 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 483
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
LS C ++ + + V L D VMLSN AE G W + +R + GLR
Sbjct: 484 LSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLR 543
Query: 542 KEAGVSWVS 550
K+ G SW
Sbjct: 544 KQGGCSWTE 552
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+IA +L A+A+ +++ G +H +++ GF M+++ L+DMY+KCG L + +VF+ M
Sbjct: 6 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ERN++++ ++++G HG + F ++ G +P+E T SA L AC GG G
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC--GGGTRAGV 123
Query: 428 EI 429
+I
Sbjct: 124 QI 125
>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 278/545 (51%), Gaps = 45/545 (8%)
Query: 9 VLEL--SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKT 64
VL+L SKS SL +LHALV ++ +D + + L++ YA + A +F
Sbjct: 34 VLKLFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSI 93
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P +VF+WN +I+ ++ A + ++ +P+ FTY + +ACS + R
Sbjct: 94 PNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGR 152
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG + G+G D SA + Y+ +++A K+F + D+V N+MI G+ CG
Sbjct: 153 QIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCG 211
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+ + LF M P + G W +
Sbjct: 212 VLEAAKGLFAQM------PVKNI------GSW---------------------------N 232
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
V+++ A+ + A +F+ + D ++WS+++ GY G Y +AL F+++ + +
Sbjct: 233 VMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRP 292
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+++SVLAA + + G +H Y+ ++ +L ++ +AL+DMY+KCG L +G +VF
Sbjct: 293 GRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVF 352
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
E M ER I T+N++I GL +HG A E F + E + P+ T +L AC H G V+
Sbjct: 353 EEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVD 412
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
G IF M E YG+ + EHY MV LLG +G EA I S+P + AV GALL
Sbjct: 413 KGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C I+GN DLAE V L E +P+ V+LSN YA+ GR+DDV K+R + + G++
Sbjct: 473 CRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVP 532
Query: 545 GVSWV 549
GVS V
Sbjct: 533 GVSIV 537
>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 278 bits (712), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 276/529 (52%), Gaps = 2/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHA V K+ D L+ +Y + + A +F + + + W S+I ++
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQL 278
Query: 83 HRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+A F+ +L + +P+ F + ACS+ + R +HG I GLG D
Sbjct: 279 GYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFA 338
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+L Y+K ++ A VF + PDLV N++I+GFA +S F M G
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P++ T++ L+ EP +L+ G +H + +K F+ V + L+SMY++C+ +N A
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ 458
Query: 262 VFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + D+V+W+ L+T QQ G+ L + + K D V + +VL ++ + A
Sbjct: 459 VFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIA 518
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G+ IH ++++ G L + VS+AL++MY+KCG L ++F+++ +II+++S+I+
Sbjct: 519 SYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIV 578
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G +AFE FR + G+ P+E TF +L AC H G+V +G +++ M E+Y I
Sbjct: 579 GYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRIS 638
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EH MV LL AG L+ A FI +P D V LL+ C ++GN ++ + A
Sbjct: 639 PTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAEN 698
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ + DP A VML N +A G W D +LR + + K G SW+
Sbjct: 699 VLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWI 747
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 203/405 (50%), Gaps = 8/405 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +SL +++H + + D ++ +Y L AR +FD P ++V W S
Sbjct: 110 SLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTS 169
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I Y+ ++A +L+ +LR+ PD+FT+ I ++CS D R +H + S
Sbjct: 170 MISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE 229
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
G D I +AL++ Y+K S + +AI VF + DL+ SMI+GF+ G+ ++L F
Sbjct: 230 FGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFR 289
Query: 195 WMLRLGK-TPDEYTL---VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
ML P+E+ S L EP G+ IHG C+K S + L MY
Sbjct: 290 EMLSQSVYQPNEFVFGSAFSACSKLLEP---DCGRQIHGLCIKFGLGSDLFAGCSLCDMY 346
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + SA VF + PDLV W+A+I G++ + ++ +F ++ G + V +
Sbjct: 347 AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A ++ + G +H Y+++ GF L + V ++L+ MYSKC L +QVFE + +
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466
Query: 371 -NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+I+++N+++ + + + + PD T + +L
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVL 511
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 210/467 (44%), Gaps = 9/467 (1%)
Query: 27 ALVAKASLLRDPFYATKLVRLY------ALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
L + A + +PF T ++ + AL+++ + ++ F P + + I +
Sbjct: 14 TLASDAIVFFNPFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISLC 73
Query: 81 LAHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +A F + P + TY + ACS L R +H + D
Sbjct: 74 KKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDM 133
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
I + +++ Y K + EA +FD + ++V SMISG++ G D ++ L+ MLR
Sbjct: 134 ILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRS 193
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD +T ++ + + +H LKS F + + L+SMY + + M A
Sbjct: 194 GHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADA 253
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAK 318
+VF+ + DL++W ++I G+SQ G +AL +FR++ Q + + + S +A +K
Sbjct: 254 INVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSK 313
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
G IHG I+ G + +L DMY+KCG+L VF + + +++ +N++
Sbjct: 314 LLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAI 373
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G ++ FF + GL P++ T +LLCAC ++N G ++ + + + G
Sbjct: 374 IAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIV-KMG 432
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
++ + NL +A + D LL+ C
Sbjct: 433 FNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC 479
>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Cucumis sativus]
Length = 792
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 276/529 (52%), Gaps = 2/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHA V K+ D L+ +Y + + A +F + + + W S+I ++
Sbjct: 219 RQLHAHVLKSEFGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQL 278
Query: 83 HRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+A F+ +L + +P+ F + ACS+ + R +HG I GLG D
Sbjct: 279 GYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGRQIHGLCIKFGLGSDLFA 338
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+L Y+K ++ A VF + PDLV N++I+GFA +S F M G
Sbjct: 339 GCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGL 398
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P++ T++ L+ EP +L+ G +H + +K F+ V + L+SMY++C+ +N A
Sbjct: 399 VPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQ 458
Query: 262 VFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + D+V+W+ L+T QQ G+ L + + K D V + +VL ++ + A
Sbjct: 459 VFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVLVSSGQIA 518
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G+ IH ++++ G L + VS+AL++MY+KCG L ++F+++ +II+++S+I+
Sbjct: 519 SYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLECARKMFDSIGNPDIISWSSLIV 578
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G +AFE FR + G+ P+E TF +L AC H G+V +G +++ M E+Y I
Sbjct: 579 GYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSHIGMVEEGLKLYRTMQEDYRIS 638
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EH MV LL AG L+ A FI +P D V LL+ C ++GN ++ + A
Sbjct: 639 PTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWKTLLAACKVHGNLEVGKRAAEN 698
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ + DP A VML N +A G W D +LR + + K G SW+
Sbjct: 699 VLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMDVGKVPGQSWI 747
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 203/405 (50%), Gaps = 8/405 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +SL +++H + + D ++ +Y L AR +FD P ++V W S
Sbjct: 110 SLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTS 169
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I Y+ ++A +L+ +LR+ PD+FT+ I ++CS D R +H + S
Sbjct: 170 MISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSE 229
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
G D I +AL++ Y+K S + +AI VF + DL+ SMI+GF+ G+ ++L F
Sbjct: 230 FGADLIAQNALISMYTKFSQMADAINVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFR 289
Query: 195 WMLRLGK-TPDEYTL---VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
ML P+E+ S L EP G+ IHG C+K S + L MY
Sbjct: 290 EMLSQSVYQPNEFVFGSAFSACSKLLEP---DCGRQIHGLCIKFGLGSDLFAGCSLCDMY 346
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+C + SA VF + PDLV W+A+I G++ + ++ +F ++ G + V +
Sbjct: 347 AKCGFLESARTVFYHIEKPDLVAWNAIIAGFASVSNAKESSSFFSQMRHTGLVPNDVTVL 406
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A ++ + G +H Y+++ GF L + V ++L+ MYSKC L +QVFE + +
Sbjct: 407 SLLCACSEPVMLNHGIQVHSYIVKMGFNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNK 466
Query: 371 -NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+I+++N+++ + + + + PD T + +L
Sbjct: 467 ADIVSWNTLLTACLQQNQAGEVLRLTKLMFASRIKPDHVTLTNVL 511
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 210/467 (44%), Gaps = 9/467 (1%)
Query: 27 ALVAKASLLRDPFYATKLVRLY------ALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
L + A + +PF T ++ + AL+++ + ++ F P + + I +
Sbjct: 14 TLASDAIVFFNPFSPTSSIKNFKPQLHLALSHIRLNTQLAFSPCPLTVHYPHDDKIISLC 73
Query: 81 LAHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +A F + P + TY + ACS L R +H + D
Sbjct: 74 KKNLHREALKAFDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDM 133
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
I + +++ Y K + EA +FD + ++V SMISG++ G D ++ L+ MLR
Sbjct: 134 ILQNHILSMYGKCGSLKEARNMFDSMPLKNVVSWTSMISGYSRYGEEDNAITLYVQMLRS 193
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD +T ++ + + +H LKS F + + L+SMY + + M A
Sbjct: 194 GHIPDHFTFGSIVKSCSGLDDFKLARQLHAHVLKSEFGADLIAQNALISMYTKFSQMADA 253
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAK 318
+VF+ + DL++W ++I G+SQ G +AL +FR++ Q + + + S +A +K
Sbjct: 254 INVFSRIIIKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSK 313
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
G IHG I+ G + +L DMY+KCG+L VF + + +++ +N++
Sbjct: 314 LLEPDCGRQIHGLCIKFGLGSDLFAGCSLCDMYAKCGFLESARTVFYHIEKPDLVAWNAI 373
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G ++ FF + GL P++ T +LLCAC ++N G ++ + + + G
Sbjct: 374 IAGFASVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIV-KMG 432
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
++ + NL +A + D LL+ C
Sbjct: 433 FNLDIPVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTAC 479
>gi|357481301|ref|XP_003610936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512271|gb|AES93894.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 812
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 166/569 (29%), Positives = 290/569 (50%), Gaps = 36/569 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SLS+ K++HA + + ++P +KL+ YA ++L A+I+ + + WN +I
Sbjct: 106 KSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVI 165
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y F DA S+++ +L + PD++TY + +AC E D VH S +
Sbjct: 166 SLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIK 225
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ALV Y + ++ A ++FD + D V N+MIS +A G WD++ +LF M
Sbjct: 226 WSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCM 285
Query: 197 LRLG-------------------------------KTPDEYTLVGLISGLWEPS---LLS 222
G + + V ++ GL S +
Sbjct: 286 REAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSHIGAVK 345
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G+ IHG +++ FD +D V + L++MY+RC +N AY +F + L+TW+A+++G++
Sbjct: 346 LGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFA 405
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI--QHGFELS 340
+ + R++ +G + + V IAS+L A+ AN+ G H Y++ + F+
Sbjct: 406 HMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGY 465
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+++ ++LV+MYS+ G + +VF+++S ++ +TY S+I+G G+ G A + F ++
Sbjct: 466 LLLWNSLVEMYSRSGKVLEARKVFDSLSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRR 525
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+ PD T A+L AC H GLV G+ +F +M E YGI + EHY MV L G AG L+
Sbjct: 526 LNIKPDHVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLD 585
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
+A I + A+ L+ C I+GN+ + E A +L E P Y ++++N YA
Sbjct: 586 KAKEVITGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYA 645
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
R D + R + D+G ++ G +WV
Sbjct: 646 AANRLDKEAEARTYMRDSGAKRTPGCAWV 674
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 155/358 (43%), Gaps = 34/358 (9%)
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
C+ L + +H I G+ ++ I S L+ Y+ + L+ +A V + + D +
Sbjct: 101 GCTNLKSLSQGKQIHAHIISLGIHQNPILVSKLINFYASVDLLADAQIVAECSNSFDPLH 160
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N +IS + ++ ++ ++ ML G PD+YT ++ E G +H
Sbjct: 161 WNMVISLYVKNCLFEDAISVYRRMLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQ 220
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+SS +V + LV MY R + A +F+ + D V+W+ +I+ Y+ +G + +A
Sbjct: 221 ESSIKWSLFVHNALVFMYGRFGKLEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFR 280
Query: 293 YF---------RKL--------------NMQGK-----------KADPVLIASVLAAAAK 318
F R + N +G + D V + L A +
Sbjct: 281 LFGCMREAGIERNIIIWNTIAGGCLHTGNFKGALKLFSQMRAVIQLDSVAMVVGLNACSH 340
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
V G IHG+ ++ F++ V + L+ MYS+C L +F + E+ +IT+N++
Sbjct: 341 IGAVKLGKEIHGHAVRTCFDVFDNVKNTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAM 400
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+ G + + R+++ +G+ P+ T +++L C + G+E M +
Sbjct: 401 LSGFAHMDRSEEVSFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKR 458
>gi|449471512|ref|XP_004153331.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 607
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 278/544 (51%), Gaps = 2/544 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL S ++ + +H + K AT L +Y +A LFDK +
Sbjct: 15 FVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVK 74
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ +S+ +F ++ QL PD+FT+ + R + + + + VH
Sbjct: 75 DLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVH 134
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
AIVS L D + ++A+++ YSKL + +A K+FD + + D V+ N MI+ +A G
Sbjct: 135 CIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPT 194
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ L+LF M R G D +T + +IS + + + G+ H L++ DS V + L+
Sbjct: 195 ECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLI 254
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY C ++SA +FN + +++WSA+I GY + G AL F K+ G +AD V
Sbjct: 255 DMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFV 314
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE-- 365
++ ++L A + +HGY ++ G +++AL+ Y+KCG + + ++FE
Sbjct: 315 IMINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEE 374
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ ++++I +NS+I HG Q F+ + + PD+ TF LL AC + GLV
Sbjct: 375 KIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEK 434
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G+E F MTE YG Q EHY MV LLG AG + EA + ++P D V G LLS C
Sbjct: 435 GKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSAC 494
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++ S LAE A +L +PR ++LSN YA G+WD V K+R + + GL+K G
Sbjct: 495 KMHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPG 554
Query: 546 VSWV 549
SW+
Sbjct: 555 CSWL 558
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 169/369 (45%), Gaps = 7/369 (1%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
FFNL + L+ S+ K +H + + L D T ++ LY+ L AR LF
Sbjct: 114 FFNLLRFIAGLN----SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLF 169
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
DK P++ +WN +I AYA + + LFK++ R+ ++ D FT + + ++ +
Sbjct: 170 DKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVD 229
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ H + +G ++L+ Y + ++D A K+F+ ++D ++ ++MI G+
Sbjct: 230 WGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYV 289
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G +L LF M G D ++ ++ L + +HG+ +K S
Sbjct: 290 KNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPS 349
Query: 242 VSSVLVSMYARCNCMNSAYHVFNS--LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+++ L+ YA+C + A +F + DL+ W+++I+ ++ GD+ + + ++
Sbjct: 350 LNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKC 409
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLG 358
K D V +L A S V G + + +G + S + +V++ + G +
Sbjct: 410 SNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLIS 469
Query: 359 LGIQVFETM 367
++ + M
Sbjct: 470 EAGELVKNM 478
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 159/331 (48%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
++ + PD TY + R+CS S++ R +HG + G + ++AL Y +
Sbjct: 1 MVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIE 60
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+ A ++FD S DL +S+ + + ++F M+ PD +T L+
Sbjct: 61 FENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRF 120
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ + + + + +H + S V++ ++S+Y++ + A +F+ + D V W
Sbjct: 121 IAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVW 180
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ +I Y+++G + L F+ + G ++D V+++ A+ V G H ++++
Sbjct: 181 NIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILR 240
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+G + V V ++L+DMY +C L ++F M+++++I+++++I G +G + A
Sbjct: 241 NGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSL 300
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVND 425
F + G+ D +L A H G + +
Sbjct: 301 FSKMKSDGIQADFVIMINILPAFVHIGALEN 331
>gi|147769567|emb|CAN65709.1| hypothetical protein VITISV_020733 [Vitis vinifera]
Length = 609
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 278/530 (52%), Gaps = 2/530 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L ++ +H V K+ D F T +V +Y + L A LF + P R V WNS+I
Sbjct: 69 NLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVASWNSMIX 128
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+A + SLF + ++ D+ T +T + DL L +H I G+
Sbjct: 129 GFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFGIKIGIDT 188
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSD--PDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D S+ + AY+K A VFDG+ V NSMI+G+AH K++ F
Sbjct: 189 DVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSKAVGFFKK 248
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
ML G D T++ L+S +P +L G+ IH ++ DS V + L+SMY++C
Sbjct: 249 MLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLISMYSKCGD 308
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ SA ++F+++ V+W+A+I G +++GD +A+ F + G+K D V I S+++
Sbjct: 309 IGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVTIISLMSG 368
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
++ + G I Y +G + ++MV +AL+D+Y+KCG + ++F TM E++++++
Sbjct: 369 CGQTGALELGKWIDTYATANGLKDNLMVCNALIDVYAKCGSMDNARELFYTMPEKSLVSW 428
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++I G L+G +A F ++E GL P+ TF A+L AC H G + G E F MT+
Sbjct: 429 TTLIAGCALNGEFKEALGLFFQMVELGLKPNHITFLAVLQACNHAGFLEKGWECFNLMTK 488
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
Y I +HY M LLG G L+EA+ FI ++P D + LLS C I+ N + E
Sbjct: 489 VYKINPGLDHYSCMADLLGRKGRLKEAFEFIQNMPFKPDVGIWSVLLSACKIHQNVVIGE 548
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
VA+ LFE +P+ V ++N YA G+WD V +R + N K +G
Sbjct: 549 CVAYHLFELEPQTAVPYVQMANIYASAGKWDRVAAIRTMMKCNKAMKSSG 598
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 115/422 (27%), Positives = 202/422 (47%), Gaps = 4/422 (0%)
Query: 53 VLPSARILFDKTPQR-SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACIT 111
V P+A F++ +V WNS I + A LF+ + + L+P+N T+ +
Sbjct: 2 VTPAATQSFNRFSNLWTVAQWNSSITESVNQGYAHKALLLFRQMKQNGLEPNNLTFPSVA 61
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
+ACS+ +L + VH + S D +++V Y K S + A +F + D+
Sbjct: 62 KACSKLLNLKYSQIVHTHVVKSRFQADLFVQTSVVDMYVKCSQLGFAYNLFSRMPXRDVA 121
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
NSMI GFA GF D+ + LF M G D T++GL L + + IH F
Sbjct: 122 SWNSMIXGFAQLGFVDRVVSLFCEMGIEGIRADSVTVIGLTHSALSLKDLKMLESIHSFG 181
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH--PDLVTWSALITGYSQQGDYGK 289
+K D+ VS+ ++ YA+C A VF+ + V+W+++I GY+ K
Sbjct: 182 IKIGIDTDVSVSNTWIAAYAKCGEFGLAETVFDGIDKGLKTXVSWNSMIAGYAHFEQCSK 241
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
A+ +F+K+ G +AD I S+L++ + ++ G +IH + IQ G + + V + L+
Sbjct: 242 AVGFFKKMLXGGFRADLSTILSLLSSCVQPEVLFHGKLIHAHGIQVGCDSDIQVINTLIS 301
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MYSKCG +G +F+ M + +++ ++I G G +A F + G PD T
Sbjct: 302 MYSKCGDIGSARYLFDNMLGKTRVSWTAMIAGXAEKGDLDEAMTLFSAMEAVGEKPDLVT 361
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
+L+ C G + G+ I T T G++ ++ + G+++ A +++
Sbjct: 362 IISLMSGCGQTGALELGKWIDTYATAN-GLKDNLMVCNALIDVYAKCGSMDNARELFYTM 420
Query: 470 PK 471
P+
Sbjct: 421 PE 422
>gi|356557599|ref|XP_003547103.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31070,
mitochondrial-like [Glycine max]
Length = 601
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 169/545 (31%), Positives = 279/545 (51%), Gaps = 2/545 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ S S Q + +LH L K + + ++ +Y + + SAR +FD P R
Sbjct: 57 VIKASSSAQCHTFGTQLHCLALKTGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRD 116
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNS+I Y +A ++ L P A + C R +H
Sbjct: 117 PITWNSLINGYLHNGYLEEALEALNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHA 176
Query: 129 GAIVSG-LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+V+ +G+ S+ALV Y + A++VFDG+ ++V +MISG +D
Sbjct: 177 LVVVNERIGQSMFLSTALVDFYFRCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYD 236
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++ F M G P+ T + L+S EP + G+ IHG+ + F+S SS LV
Sbjct: 237 EAFACFRAMQAEGVCPNRVTSIALLSACAEPGFVKHGKEIHGYAFRHGFESCPSFSSALV 296
Query: 248 SMYARC-NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+MY +C M+ A +F D+V WS++I +S++GD KAL F K+ + + +
Sbjct: 297 NMYCQCGEPMHLAELIFEGSSFRDVVLWSSIIGSFSRRGDSFKALKLFNKMRTEEIEPNY 356
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + +V++A +++ G +HGY+ + GF S+ V +AL++MY+KCG L ++F
Sbjct: 357 VTLLAVISACTNLSSLKHGCGLHGYIFKFGFCFSISVGNALINMYAKCGCLNGSRKMFLE 416
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M R+ +T++S+I GLHG QA + F ++ E+G+ PD TF A+L AC H GLV +G
Sbjct: 417 MPNRDNVTWSSLISAYGLHGCGEQALQIFYEMNERGVKPDAITFLAVLSACNHAGLVAEG 476
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+ IF ++ + I EHY +V LLG +G LE A ++P + +L+S C
Sbjct: 477 QRIFKQVRADCEIPLTIEHYACLVDLLGRSGKLEYALEIRRTMPMKPSARIWSSLVSACK 536
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++G D+AE++A QL ++P +L+ YAE G W D ++R+ + L+K G
Sbjct: 537 LHGRLDIAEMLAPQLIRSEPNNAGNYTLLNTIYAEHGHWLDTEQVREAMKLQKLKKCYGF 596
Query: 547 SWVSG 551
S +
Sbjct: 597 SRIEA 601
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 131/257 (50%), Gaps = 1/257 (0%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
++ I F G + ++LQLF + G + + L +I + G +H LK
Sbjct: 20 SNQIKSFLSKGLYHQTLQLFSELHLCGHSSISFFLPSVIKASSSAQCHTFGTQLHCLALK 79
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ S VS+ +++MY + + + SA VF+++ H D +TW++LI GY G +AL
Sbjct: 80 TGSHSETVVSNSIITMYFKFSDVGSARQVFDTMPHRDPITWNSLINGYLHNGYLEEALEA 139
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG-YVIQHGFELSVMVSSALVDMYS 352
+ + G P L+ASV++ + G IH V+ S+ +S+ALVD Y
Sbjct: 140 LNDVYLLGLVPKPELLASVVSMCGRRMGSKIGRQIHALVVVNERIGQSMFLSTALVDFYF 199
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
+CG + ++VF+ M +N++++ ++I G H +AF FR + +G+ P+ T A
Sbjct: 200 RCGDSLMALRVFDGMEVKNVVSWTTMISGCIAHQDYDEAFACFRAMQAEGVCPNRVTSIA 259
Query: 413 LLCACCHGGLVNDGREI 429
LL AC G V G+EI
Sbjct: 260 LLSACAEPGFVKHGKEI 276
>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 786
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 173/582 (29%), Positives = 283/582 (48%), Gaps = 68/582 (11%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
LR F ++ YA + S+ FD+ PQR W ++I Y +++ A +
Sbjct: 77 LRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGE 136
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK--- 151
++R ++P FT + + + L + VH + GL + S++L+ Y+K
Sbjct: 137 MMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 152 ----------------------------LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +D A+ F+ +++ D+V NSMISG+
Sbjct: 197 PMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQR 256
Query: 184 GFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G+ ++L +F MLR +PD +TL ++S L +G+ IH + + FD V
Sbjct: 257 GYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIV 316
Query: 243 SSVLVSMYARCNC---------------------------------MNSAYHVFNSLFHP 269
+ L+SMY+RC MN A ++F+SL
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDR 376
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D+V W+A+I GY Q G YG+A+ FR + + ++ + +A++L+ A+ A++ G IH
Sbjct: 377 DVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIH 436
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFT 388
G ++ G SV VS+AL+ MY+K G + + F+ + ER+ +++ S+I+ L HG
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
+A E F ++ +GL PD T+ + AC H GLVN GR+ F M + I HY
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
MV L G AG L+EA FI +P D G+LLS C +Y N DL ++ A +L +P
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPEN 616
Query: 509 -GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
GAY L+N Y+ G+W++ K+R + D ++KE G SW+
Sbjct: 617 SGAYSA-LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 166/402 (41%), Gaps = 96/402 (23%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ VH I SGL + L+ YSK A K+FD + N+++S +A
Sbjct: 34 QLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYAKR 93
Query: 184 GFWDKSLQLFD---------W----------------------MLRLGKTPDEYTLVGLI 212
G D S + FD W M+R G P ++TL ++
Sbjct: 94 GDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVL 153
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC------------------- 253
+ + L G+ +H F +K VS+ L++MYA+C
Sbjct: 154 ASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDIS 213
Query: 254 ------------NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
M+ A F + D+VTW+++I+GY+Q+G +AL F K+
Sbjct: 214 SWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDS 273
Query: 302 K-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC------ 354
D +ASVL+A A + G IH +++ GF++S +V +AL+ MYS+C
Sbjct: 274 MLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333
Query: 355 ----------------------GYLGLG-----IQVFETMSERNIITYNSVILGLGLHGF 387
GY+ LG +F+++ +R+++ + ++I+G HG
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGL 393
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+A FR ++ + P+ T +A+L + G++I
Sbjct: 394 YGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQI 435
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
KS + ++H VI+ G SV + + L+++YSK GY ++F+ M R ++N+
Sbjct: 26 KSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNT 85
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
V+ G + EFF + ++ D +++ ++ + G + I M E
Sbjct: 86 VLSAYAKRGDMDSSCEFFDRLPQR----DSVSWTTMIVGYKNIGQYHKAIRIMGEMMRE- 140
Query: 438 GIQAKTEHYIYMVKLLGLAGNLE---EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
GI+ ++ + LE + +SFI L + +VS +LL+ G+ +A
Sbjct: 141 GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200
Query: 495 EIVAHQLFEND 505
++V ++ D
Sbjct: 201 KVVFDRMVVKD 211
>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 174/531 (32%), Positives = 278/531 (52%), Gaps = 39/531 (7%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LHAL+ A ++ F +T+LV LYA + +R FD+ PQ+ V+ WNS+I AY
Sbjct: 36 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 95
Query: 83 HRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
F++A F LL ++++PD +T+ + +AC D R +H A G +
Sbjct: 96 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVDG---RKIHCWAFKLGFQWNVFV 152
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++L+ YS+ A +FD + D+ N+MISG G ++L + D M G
Sbjct: 153 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 212
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ T+V ++ V V MYA+ ++SA+
Sbjct: 213 KMNFVTVVSILP-------------------------------VFVDMYAKLGLLDSAHK 241
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV--LIASVLAAAAKS 319
VF + D+++W+ LITGY+Q G +A+ ++ + + K+ P S+L A A
Sbjct: 242 VFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME-ECKEIIPNQGTWVSILPAYAHV 300
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G IHG VI+ L V V++ L+D+Y KCG L + +F + + + +T+N++I
Sbjct: 301 GALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAII 360
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G+HG + + F +++++G+ PD TF +LL AC H G V +G+ F R+ +EYGI
Sbjct: 361 SCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF-RLMQEYGI 419
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ +HY MV LLG AG LE AY FI +P D ++ GALL C I+GN +L + +
Sbjct: 420 KPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGNIELGKFASD 479
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+LFE D + Y V+LSN YA G+W+ V K+R + GL+K G S +
Sbjct: 480 RLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 530
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 193/417 (46%), Gaps = 44/417 (10%)
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
++ P + +H +V+G + S+ LV Y+ L + + FD + D+ NSM
Sbjct: 29 STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 88
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
IS + H G + +++ F +L + + PD YT ++ L G+ IH + K
Sbjct: 89 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLG 145
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
F +V++ L+ MY+R A +F+ + D+ +W+A+I+G Q G+ +AL
Sbjct: 146 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 205
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ ++G K + V + S+L VDMY+K G
Sbjct: 206 EMRLEGIKMNFVTVVSILP-------------------------------VFVDMYAKLG 234
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALL 414
L +VFE + +++I++N++I G +G +A E ++ + E K + P++ T+ ++L
Sbjct: 235 LLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSIL 294
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
A H G + G +I R+ + + ++ + G G L +A S + +P+
Sbjct: 295 PAYAHVGALQQGMKIHGRVIKT-NLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE-S 352
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFEN--DPRKGAYKVMLS----NTYAEDGRW 525
A++SC I+G+++ + ++ + P + +LS + + E+G+W
Sbjct: 353 SVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 409
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + ++H V K +L D F AT L+ +Y L A LF + PQ S WN+II
Sbjct: 302 ALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIIS 361
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+ + LF +L +KPD+ T+ + ACS +
Sbjct: 362 CHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHS 401
>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g15510, chloroplastic; Flags: Precursor
gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 866
Score = 278 bits (711), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 163/532 (30%), Positives = 276/532 (51%), Gaps = 3/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+R KE+H V + D L+ +Y + SAR+LFD+ P+R + WN++I
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y ++ LF + + PD T + AC D R +H I +G D
Sbjct: 272 YFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L Y EA K+F + D+V +MISG+ + DK++ + M +
Sbjct: 332 ISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQ 391
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
PDE T+ ++S L G +H +K+ SY V++ L++MY++C C++
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+++ ++++W+++I G +AL + R++ M + + + + + LAA A+
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKMT-LQPNAITLTAALAACAR 510
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH +V++ G L + +AL+DMY +CG + F + ++++ ++N +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNIL 569
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G G E F +++ + PDE TF +LLC C +V G F++M E+YG
Sbjct: 570 LTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYG 628
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
+ +HY +V LLG AG L+EA+ FI +P DPAV GALL+ C I+ DL E+ A
Sbjct: 629 VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSA 688
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+FE D + Y ++L N YA+ G+W +V K+R + +NGL +AG SWV
Sbjct: 689 QHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/377 (29%), Positives = 189/377 (50%), Gaps = 2/377 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITR 112
L A +F K +R++F WN ++ YA F++A L+ +L +KPD +T+ C+ R
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
C DL + VH + G D +AL+T Y K + A +FD + D++
Sbjct: 205 TCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+MISG+ G + L+LF M L PD TL +IS +G+ IH + +
Sbjct: 265 WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ F V + L MY A +F+ + D+V+W+ +I+GY KA+
Sbjct: 325 TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAID 384
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
+R ++ K D + +A+VL+A A ++ G +H I+ V+V++ L++MYS
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KC + + +F + +N+I++ S+I GL L+ ++A F R ++ L P+ T +A
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ-MKMTLQPNAITLTA 503
Query: 413 LLCACCHGGLVNDGREI 429
L AC G + G+EI
Sbjct: 504 ALAACARIGALMCGKEI 520
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 126/254 (49%), Gaps = 1/254 (0%)
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
+ G G +++++L + M L DE V L+ G ++ L S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL-YYFR 295
+ + ++M+ R + A++VF + +L +W+ L+ GY++QG + +A+ Y R
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
L + G K D VL ++ G +H +V+++G+EL + V +AL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ +F+ M R+II++N++I G +G ++ E F + ++PD T ++++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVIS 305
Query: 416 ACCHGGLVNDGREI 429
AC G GR+I
Sbjct: 306 ACELLGDRRLGRDI 319
>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
Length = 1725
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 167/493 (33%), Positives = 255/493 (51%), Gaps = 9/493 (1%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ +V WNS+I A +A F +L + L P ++ C ++CS DL R
Sbjct: 1104 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 1163
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
H A V G D SSAL+ YSK + +A +FD + ++V SMI+G+
Sbjct: 1164 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 1223
Query: 186 WDKSLQLFDWMLRL-------GKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
D +L LF L P D +V ++S S + +G+HGF +K FD
Sbjct: 1224 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 1283
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
V + L+ YA+C + VF+ + D ++W+++I Y+Q G G+AL F +
Sbjct: 1284 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 1343
Query: 298 NMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
G + + V +++VL A A + + G IH VI+ E +V V ++++DMY KCG
Sbjct: 1344 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 1403
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ + + F+ M E+N+ ++ +++ G G+HG +A + F ++ G+ P+ TF ++L A
Sbjct: 1404 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 1463
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C H GLV +G F M +Y I+ EHY MV L G AG L EAY+ I + D
Sbjct: 1464 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 1523
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
V G+LL C I+ N DL EI A +LFE DP Y V+LSN YA+ GRW DV ++R +
Sbjct: 1524 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 1583
Query: 537 DNGLRKEAGVSWV 549
+ L K G S V
Sbjct: 1584 NRQLVKPPGFSLV 1596
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 181/372 (48%), Gaps = 31/372 (8%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
LR +H I SGL D + + L+ YS I AI +F + +P N +I
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +++L L+ M+ G D++T +I + +G+ +HG +K F +V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162
Query: 243 SSVLVSMYARC-----------------------------NC--MNSAYHVFNSLFHPDL 271
+ L+ Y +C +C + A +F+ + ++
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
V+W+A+I GY + +AL F+++ + + + S++ A + + G IH Y
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
I++ E+ V + +AL+DMYSKCG + I+VFETM +++ T+NS+I LG+HG +A
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
F ++ + PD TF +LCAC H V +G FTRMT+ YGI EHY M +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402
Query: 452 LLGLAGNLEEAY 463
L + NL+EA+
Sbjct: 403 LYARSNNLDEAF 414
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 160/357 (44%), Gaps = 31/357 (8%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L L ++ ++ +++HA + ++ L D KL+ LY+ + + A +LF +
Sbjct: 31 LFLLQNCKNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCT 90
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
F WN IIRA + A L+KN++ + D FT+ + +AC+ + + VHG
Sbjct: 91 FTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGS 150
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG----- 184
I G D + L+ Y K A+KVF+ + ++V ++ISG CG
Sbjct: 151 LIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEA 210
Query: 185 -------------FW-------------DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
W +++L+LF M P+EYT+V LI E
Sbjct: 211 RRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEM 270
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+L++G+GIH + +K+ + Y+ + L+ MY++C + A VF ++ L TW+++I
Sbjct: 271 GILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMI 330
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
T G +AL F ++ K D + VL A NV G + QH
Sbjct: 331 TSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQH 387
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 19/364 (5%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F ++ L+ +Y+ L AR LFD+ P R+V W S+I Y + ++A LFK+ L
Sbjct: 1176 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 1235
Query: 97 RTQLKP--------DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
+ + D+ + ACS S VHG + G + L+ A
Sbjct: 1236 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 1295
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGKTPDEYT 207
Y+K + KVFD + + D + NSMI+ +A G ++L++F M+R +G + T
Sbjct: 1296 YAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVT 1355
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
L ++ L G+ IH +K + V + ++ MY +C + A F+ +
Sbjct: 1356 LSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK 1415
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV----- 322
++ +W+A++ GY G +AL F K+ G K + + SVLAA + + V
Sbjct: 1416 EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWH 1475
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSVILG 381
W A+ H Y I+ G E +VD++ + G L + + M + + + + S++
Sbjct: 1476 WFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 1531
Query: 382 LGLH 385
+H
Sbjct: 1532 CRIH 1535
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 132/292 (45%), Gaps = 40/292 (13%)
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IH ++S + ++ L+ +Y+ + A +F + +P TW+ +I + G
Sbjct: 46 IHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTINGL 105
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+AL ++ + QG AD V+ A ++ G V+HG +I++GF V V +
Sbjct: 106 SEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQNN 165
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL------------------------ 382
L+D Y KCG+ ++VFE M RN++++ +VI GL
Sbjct: 166 LIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVVSW 225
Query: 383 --GLHGFTY-----QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++G+ +A E F+ + + + P+E T +L+ AC G++ GR I
Sbjct: 226 TAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI-----H 280
Query: 436 EYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+Y I+ E +Y ++ + G++++A ++P+ P + + S
Sbjct: 281 DYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K +H V K L + T ++ +Y + A+ FD+ +++V W +++
Sbjct: 1368 ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVA 1427
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y + R +A +F ++R +KP+ T+ + ACS
Sbjct: 1428 GYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 1465
>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
Length = 903
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 285/550 (51%), Gaps = 13/550 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
LV+ LS + + + + +H++V ++ L + +T L YA L A+ +FD+ +R
Sbjct: 231 LVITLSVCAK-IRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQAKEVFDRAAER 289
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V WN+++ AYA ++A LF +L + P T + CS L R +H
Sbjct: 290 DVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCS---SLRFGRMIH 346
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
A+ GL RD + +AL+ Y++ +EA +F+G+ + V N+MI+G + G
Sbjct: 347 ACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTMIAGSSQKGQMK 405
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGL----WEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
++L+LF M G P T + L+ + E ++ G+ +H + + S +
Sbjct: 406 RALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIG 465
Query: 244 SVLVSMYARCNCMNSAYHVFNSLF---HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+ +V MYA C ++ A F D+V+W+A+I+ SQ G +AL +FR++++
Sbjct: 466 TAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLH 525
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + + +VL A A +A + G ++H ++ G E +V V++AL MY +CG L
Sbjct: 526 GVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESA 585
Query: 361 IQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++FE ++ ER+++ +N++I +G +A + F + ++G PDE +F ++L AC H
Sbjct: 586 REIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSH 645
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GGL ++G EIF M + YGI +HY V +LG AG L +A I + V
Sbjct: 646 GGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWK 705
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
LL C Y + D + + E DP + V+LSN A G+WD+ ++R ++ G
Sbjct: 706 TLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRG 765
Query: 540 LRKEAGVSWV 549
LRK+AG SW+
Sbjct: 766 LRKQAGKSWI 775
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/448 (25%), Positives = 213/448 (47%), Gaps = 15/448 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
LS+ + +HA + L + L+RLY L +F + R W +II A
Sbjct: 45 LSQGRRIHARIVSLGL--EEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + A +F + + ++ D T+ + +AC+ DL R +H + SGL
Sbjct: 103 YTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGK 162
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+ ++ L+ Y + A+ +F+ + + DLV N+ I+ A G D +L+LF M
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGDLDMALELFQRMQL 221
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G P TLV +S + + + IH +S + VS+ L S YAR ++
Sbjct: 222 EGVRPARITLVITLSVC---AKIRQARAIHSIVRESGLEQTLVVSTALASAYARLGHLDQ 278
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ D+V+W+A++ Y+Q G +A F ++ +G V +++ A+
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKV---TLVNASTG 335
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+++ G +IH ++ G + +++ +AL+DMY++CG +FE + N +++N++
Sbjct: 336 CSSLRFGRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFEGIPG-NAVSWNTM 394
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC----HGGLVNDGREIFTRMT 434
I G G +A E F+ + +G+ P +T+ LL A + +GR++ +R+
Sbjct: 395 IAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
G ++ +VK+ G ++EA
Sbjct: 455 -SCGYASEPAIGTAVVKMYASCGAIDEA 481
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 144/312 (46%), Gaps = 12/312 (3%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
LV L+ + LLS G+ IH + S + + + L+ +Y +C + VF+ L
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIV--SLGLEEELGNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
D +W+ +IT Y++ G +A++ F ++ +G + D V +VL A A+ ++ G
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IH ++++ G E ++++ L+ +Y CG + + +FE M ER+++++N+ I G
Sbjct: 150 IHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERM-ERDLVSWNAAIAANAQSGD 208
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
A E F+ + +G+ P T L C + R I + + E G++
Sbjct: 209 LDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQARAIHS-IVRESGLEQTLVVST 264
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN-SDLAEIVAHQLFENDP 506
+ G+L++A ++ D A+L +G+ S+ A + A L E P
Sbjct: 265 ALASAYARLGHLDQAKE-VFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIP 323
Query: 507 RKGAYKVMLSNT 518
KV L N
Sbjct: 324 ---PSKVTLVNA 332
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 144/333 (43%), Gaps = 24/333 (7%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
+ NL V + ++++ ++LH+ + +P T +V++YA + A F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485
Query: 62 DK---TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
+ + V WN+II + + A F+ + + P+ T + AC+ +
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMI 177
L VH SG+ + ++AL + Y + ++ A ++F+ V+ + D+V+ N+MI
Sbjct: 546 ALTEGVIVHDHLRHSGMESNVFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCL 232
+ ++ G ++L+LF M + G PDE + V ++S L G I + +
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKAL 291
S D Y + V + R + A + + P ++ W L+ + D +
Sbjct: 666 APSEDHY----ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRG- 720
Query: 292 YYFRKLNMQGKKADP------VLIASVLAAAAK 318
R N ++ DP V+++++LA A K
Sbjct: 721 ---RLANSMVRELDPGDESAYVVLSNILAGAGK 750
>gi|449455116|ref|XP_004145299.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 722
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 173/543 (31%), Positives = 278/543 (51%), Gaps = 2/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++ + +H + K AT L +Y +A LFDK +
Sbjct: 131 VLRSCSSFSNVGFGRTIHGYLVKLGFDLFDVVATALAEMYEECIEFENAHQLFDKRSVKD 190
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +S+ +F ++ QL PD+FT+ + R + + + + VH
Sbjct: 191 LGWPSSLTTEGPQNDNGEGIFRVFGRMIAEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHC 250
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AIVS L D + ++A+++ YSKL + +A K+FD + + D V+ N MI+ +A G +
Sbjct: 251 IAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLFDKMPEKDRVVWNIMIAAYAREGKPTE 310
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+LF M R G D +T + +IS + + + G+ H L++ DS V + L+
Sbjct: 311 CLELFKSMARSGIRSDLFTALPVISSIAQLKCVDWGKQTHAHILRNGSDSQVSVHNSLID 370
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY C ++SA +FN + +++WSA+I GY + G AL F K+ G +AD V+
Sbjct: 371 MYCECKILDSACKIFNWMTDKSVISWSAMIKGYVKNGQSLTALSLFSKMKSDGIQADFVI 430
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE--T 366
+ ++L A + +HGY ++ G +++AL+ Y+KCG + + ++FE
Sbjct: 431 MINILPAFVHIGALENVKYLHGYSMKLGLTSLPSLNTALLITYAKCGSIEMAQRLFEEEK 490
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ ++++I +NS+I HG Q F+ + + PD+ TF LL AC + GLV G
Sbjct: 491 IDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKCSNSKPDQVTFLGLLTACVNSGLVEKG 550
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+E F MTE YG Q EHY MV LLG AG + EA + ++P D V G LLS C
Sbjct: 551 KEFFKEMTESYGCQPSQEHYACMVNLLGRAGLISEAGELVKNMPIKPDARVWGPLLSACK 610
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++ S LAE A +L +PR ++LSN YA G+WD V K+R + + GL+K G
Sbjct: 611 MHPGSKLAEFAAEKLINMEPRNAGNYILLSNIYAAAGKWDGVAKMRSFLRNKGLKKIPGC 670
Query: 547 SWV 549
SW+
Sbjct: 671 SWL 673
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/408 (21%), Positives = 193/408 (47%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ +++HA ++P ++KL+ YA +L + +F ++ L+N+I+R
Sbjct: 39 SIQHLQQIHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILR 98
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+++ ++ + PD TY + R+CS S++ R +HG + G
Sbjct: 99 NLTRYGESERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTIHGYLVKLGFDL 158
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ ++AL Y + + A ++FD S DL +S+ + + ++F M+
Sbjct: 159 FDVVATALAEMYEECIEFENAHQLFDKRSVKDLGWPSSLTTEGPQNDNGEGIFRVFGRMI 218
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD +T L+ + + + + + +H + S V++ ++S+Y++ +
Sbjct: 219 AEQLVPDSFTFFNLLRFIAGLNSIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLV 278
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ + D V W+ +I Y+++G + L F+ + G ++D V+++ A
Sbjct: 279 DARKLFDKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIA 338
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ V G H +++++G + V V ++L+DMY +C L ++F M+++++I++++
Sbjct: 339 QLKCVDWGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSA 398
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+I G +G + A F + G+ D +L A H G + +
Sbjct: 399 MIKGYVKNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALEN 446
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 169/369 (45%), Gaps = 7/369 (1%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
FFNL + L+ S+ K +H + + L D T ++ LY+ L AR LF
Sbjct: 229 FFNLLRFIAGLN----SIQLAKIVHCIAIVSKLSGDLLVNTAVLSLYSKLRSLVDARKLF 284
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
DK P++ +WN +I AYA + + LFK++ R+ ++ D FT + + ++ +
Sbjct: 285 DKMPEKDRVVWNIMIAAYAREGKPTECLELFKSMARSGIRSDLFTALPVISSIAQLKCVD 344
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ H + +G ++L+ Y + ++D A K+F+ ++D ++ ++MI G+
Sbjct: 345 WGKQTHAHILRNGSDSQVSVHNSLIDMYCECKILDSACKIFNWMTDKSVISWSAMIKGYV 404
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G +L LF M G D ++ ++ L + +HG+ +K S
Sbjct: 405 KNGQSLTALSLFSKMKSDGIQADFVIMINILPAFVHIGALENVKYLHGYSMKLGLTSLPS 464
Query: 242 VSSVLVSMYARCNCMNSAYHVFNS--LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+++ L+ YA+C + A +F + DL+ W+++I+ ++ GD+ + + ++
Sbjct: 465 LNTALLITYAKCGSIEMAQRLFEEEKIDDKDLIMWNSMISAHANHGDWSQCFKLYNRMKC 524
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLG 358
K D V +L A S V G + + +G + S + +V++ + G +
Sbjct: 525 SNSKPDQVTFLGLLTACVNSGLVEKGKEFFKEMTESYGCQPSQEHYACMVNLLGRAGLIS 584
Query: 359 LGIQVFETM 367
++ + M
Sbjct: 585 EAGELVKNM 593
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IH I HGF + +SS L+D Y+ G L +QVF ++ + N+ +N+++ L +G
Sbjct: 46 IHARFILHGFHQNPTLSSKLIDCYANLGLLNHSLQVFCSVIDPNLTLFNAILRNLTRYGE 105
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
+ + ++ ++ K ++PDE T+ +L +C V GR I +G K +
Sbjct: 106 SERTLLVYQQMVAKSMHPDEETYPFVLRSCSSFSNVGFGRTI-------HGYLVKLGFDL 158
Query: 448 YMVKLLGLAGNLEEAYSF 465
+ V LA EE F
Sbjct: 159 FDVVATALAEMYEECIEF 176
>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g48910-like [Cucumis sativus]
Length = 666
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 175/545 (32%), Positives = 277/545 (50%), Gaps = 45/545 (8%)
Query: 9 VLEL--SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKT 64
VL+L SKS SL +LH LV ++ +D + + L++ YA + A +F
Sbjct: 34 VLKLFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSI 93
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P +VF+WN +I+ ++ A + ++ +P+ FTY + +ACS + R
Sbjct: 94 PNPNVFIWNIVIKGCLENNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGR 152
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG + G+G D SA + Y+ +++A K+F + D+V N+MI G+ CG
Sbjct: 153 QIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS-GESDVVCWNTMIDGYLKCG 211
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+ + LF M P + G W +
Sbjct: 212 VLEAAKGLFAQM------PVKNI------GSW---------------------------N 232
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
V+++ A+ + A +F+ + D ++WS+++ GY G Y +AL F+++ + +
Sbjct: 233 VMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRP 292
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+++SVLAA + + G +H Y+ ++ +L ++ +AL+DMY+KCG L +G +VF
Sbjct: 293 GRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVF 352
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
E M ER I T+N++I GL +HG A E F + E + P+ T +L AC H G V+
Sbjct: 353 EEMKEREIFTWNAMIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVD 412
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
G IF M E YG+ + EHY MV LLG +G EA I S+P + AV GALL
Sbjct: 413 KGLRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGA 472
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C I+GN DLAE V L E +P+ V+LSN YA+ GR+DDV K+R + D G++
Sbjct: 473 CRIHGNFDLAERVGKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVP 532
Query: 545 GVSWV 549
GVS V
Sbjct: 533 GVSIV 537
>gi|449508637|ref|XP_004163369.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 594
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 266/511 (52%), Gaps = 2/511 (0%)
Query: 40 YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ 99
+AT L++ Y + A LF++ P+R V W ++I + + ++ A ++F +LR++
Sbjct: 45 WATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSE 104
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS-KLSLIDEA 158
++P+ FT + + +AC L H A G+ R +AL+ Y+ + +D+A
Sbjct: 105 VQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDA 164
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+ VF+ + V ++I+GF H G L F ML P+ ++
Sbjct: 165 LSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASI 224
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
S S G+ IH K V + ++ MY RCN + A F L +L+TW+ LI
Sbjct: 225 SSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLI 284
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GY ++ D ++L F ++ +G K + S+ AA A A + G +HG +++ GF+
Sbjct: 285 AGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V + ++L+DMY+KCG + ++F M R+++++ ++++G G HG+ +A + F ++
Sbjct: 344 KNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
++ G+ PD F +LC C H GLV+ G + F M E+Y I E Y +V LLG AG
Sbjct: 404 VQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGR 463
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
+EEA+ + ++P D +V GALL C Y S+L + A ++ + P ++LS
Sbjct: 464 VEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKI 523
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA +G+W + K+R + +KE G SW+
Sbjct: 524 YAAEGKWGEFAKMRKLMKGMNKKKEVGKSWI 554
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 159/333 (47%), Gaps = 3/333 (0%)
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+ ++ L+ +Y L EA +F+ + + D+V +MI GF C + ++ +F MLR
Sbjct: 43 SVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLR 102
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY-ARCNCMN 257
P+ +T+ ++ LS G H K D YV + L+ MY A C M+
Sbjct: 103 SEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMD 162
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VFN + V+W+ LI G++ +GD L FR++ ++ + + A A
Sbjct: 163 DALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACA 222
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G IH V ++G V ++++DMY +C YL + F ++E+N+IT+N+
Sbjct: 223 SISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNT 282
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G + ++ F + +G P+ TF+++ AC + +++ G+++ +
Sbjct: 283 LIAGYE-RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRR- 340
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
G ++ + G++ +++ +P
Sbjct: 341 GFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 203/462 (43%), Gaps = 53/462 (11%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQR 67
VL+ K ++LS H+L K + R + L+ +YA + + A +F+ P +
Sbjct: 115 VLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLK 174
Query: 68 SVFLWNSIIRAYALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ W ++I + HR + L F+ +L + P++F+++ RAC+ S +
Sbjct: 175 TAVSWTTLIAGF--THRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQ 232
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H GL D+ ++++ Y + + + +A + F +++ +L+ N++I+G+
Sbjct: 233 IHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDS 292
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+SL LF M G P+ +T + + ++LS GQ +HG ++ FD + +
Sbjct: 293 -SESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINS 351
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKA 304
L+ MYA+C ++ ++ +F + DLV+W+ ++ GY G YGK A+ F ++ G +
Sbjct: 352 LIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHG-YGKEAVKLFDEMVQSGIQP 410
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D ++ VL S G + G++ F
Sbjct: 411 DRIVFMGVLCGC-----------------------------------SHAGLVDKGLKYF 435
Query: 365 ETMSERNIIT-----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+M E I Y V+ LG G +AF+ ++ PDES + ALL AC
Sbjct: 436 RSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENM---PFEPDESVWGALLGACKA 492
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
L N G R+ + A T Y+ + K+ G E
Sbjct: 493 YKLSNLGNLAAQRVLDRRPNMAGT--YLLLSKIYAAEGKWGE 532
>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 255/494 (51%), Gaps = 9/494 (1%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ +V WNS+I A +A F +L + L P ++ C ++CS DL R
Sbjct: 1977 KSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRM 2036
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
H A V G D SSAL+ YSK + +A +FD + ++V SMI+G+
Sbjct: 2037 SHQQAFVFGFETDLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQ 2096
Query: 186 WDKSLQLFDWMLRL-------GKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
D +L LF L P D +V ++S S + +G+HGF +K FD
Sbjct: 2097 ADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFD 2156
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
V + L+ YA+C + VF+ + D ++W+++I Y+Q G G+AL F +
Sbjct: 2157 GSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGM 2216
Query: 298 NMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
G + + V +++VL A A + + G IH VI+ E +V V ++++DMY KCG
Sbjct: 2217 VRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGR 2276
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ + + F+ M E+N+ ++ +++ G G+HG +A + F ++ G+ P+ TF ++L A
Sbjct: 2277 VEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAA 2336
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C H GLV +G F M +Y I+ EHY MV L G AG L EAY+ I + D
Sbjct: 2337 CSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFV 2396
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
V G+LL C I+ N DL EI A +LFE DP Y V+LSN YA+ GRW DV ++R +
Sbjct: 2397 VWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGRWADVERMRMLMK 2456
Query: 537 DNGLRKEAGVSWVS 550
+ L K G S V
Sbjct: 2457 NRQLVKPPGFSLVE 2470
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 181/373 (48%), Gaps = 31/373 (8%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
LR +H I SGL D + + L+ YS I AI +F + +P N +I
Sbjct: 43 LRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTI 102
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +++L L+ M+ G D++T +I + +G+ +HG +K F +V
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162
Query: 243 SSVLVSMYARC-----------------------------NC--MNSAYHVFNSLFHPDL 271
+ L+ Y +C +C + A +F+ + ++
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNV 222
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
V+W+A+I GY + +AL F+++ + + + S++ A + + G IH Y
Sbjct: 223 VSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDY 282
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
I++ E+ V + +AL+DMYSKCG + I+VFETM +++ T+NS+I LG+HG +A
Sbjct: 283 AIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHGLGQEA 342
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
F ++ + PD TF +LCAC H V +G FTRMT+ YGI EHY M +
Sbjct: 343 LNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPEHYECMTE 402
Query: 452 LLGLAGNLEEAYS 464
L + NL+EA+
Sbjct: 403 LYARSNNLDEAFK 415
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 156/350 (44%), Gaps = 31/350 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++ +++HA + ++ L D KL+ LY+ + + A +LF + F WN II
Sbjct: 38 KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLII 97
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
RA + A L+KN++ + D FT+ + +AC+ + + VHG I G
Sbjct: 98 RANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFS 157
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG------------ 184
D + L+ Y K A+KVF+ + ++V ++ISG CG
Sbjct: 158 GDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEI 217
Query: 185 ------FW-------------DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
W +++L+LF M P+EYT+V LI E +L++G+
Sbjct: 218 PSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGR 277
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
GIH + +K+ + Y+ + L+ MY++C + A VF ++ L TW+++IT G
Sbjct: 278 GIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGVHG 337
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+AL F ++ K D + VL A NV G + QH
Sbjct: 338 LGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQH 387
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 167/364 (45%), Gaps = 19/364 (5%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F ++ L+ +Y+ L AR LFD+ P R+V W S+I Y + ++A LFK+ L
Sbjct: 2049 DLFVSSALIDMYSKCGQLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFL 2108
Query: 97 RTQLKP--------DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
+ + D+ + ACS S VHG + G + L+ A
Sbjct: 2109 EEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDA 2168
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGKTPDEYT 207
Y+K + KVFD + + D + NSMI+ +A G ++L++F M+R +G + T
Sbjct: 2169 YAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVT 2228
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
L ++ L G+ IH +K + V + ++ MY +C + A F+ +
Sbjct: 2229 LSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMK 2288
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV----- 322
++ +W+A++ GY G +AL F K+ G K + + SVLAA + + V
Sbjct: 2289 EKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWH 2348
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSVILG 381
W A+ H Y I+ G E +VD++ + G L + + M + + + + S++
Sbjct: 2349 WFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLGA 2404
Query: 382 LGLH 385
+H
Sbjct: 2405 CRIH 2408
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 40/294 (13%)
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ IH ++S + ++ L+ +Y+ + A +F + +P TW+ +I +
Sbjct: 44 RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
G +AL ++ + QG AD V+ A ++ G V+HG +I++GF V V
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL---------------------- 382
+ L+D Y KCG+ ++VFE M RN++++ +VI GL
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223
Query: 383 ----GLHGFTY-----QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++G+ +A E F+ + + + P+E T +L+ AC G++ GR I
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGI---- 279
Query: 434 TEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+Y I+ E +Y ++ + G++++A ++P+ P + + S
Sbjct: 280 -HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITS 332
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 77/166 (46%)
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
FD Y S + R + N A + + ++ +W+++I ++ GD +AL F
Sbjct: 1945 FDGITYNSILFGVPSGREDHSNLATWFYKYVDKSNVHSWNSVIADLARGGDSVEALRAFS 2004
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
L G + + + ++ G + H GFE + VSSAL+DMYSKCG
Sbjct: 2005 SLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKCG 2064
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
L +F+ + RN++++ S+I G + A F+D +E+
Sbjct: 2065 QLKDARALFDEIPLRNVVSWTSMITGYVQNEQADNALLLFKDFLEE 2110
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 48/98 (48%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K +H V K L + T ++ +Y + A+ FD+ +++V W +++
Sbjct: 2241 ALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVA 2300
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y + R +A +F ++R +KP+ T+ + ACS
Sbjct: 2301 GYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACS 2338
>gi|449435950|ref|XP_004135757.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Cucumis sativus]
Length = 606
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/511 (29%), Positives = 266/511 (52%), Gaps = 2/511 (0%)
Query: 40 YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ 99
+AT L++ Y + A LF++ P+R V W ++I + + ++ A ++F +LR++
Sbjct: 45 WATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLRSE 104
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS-KLSLIDEA 158
++P+ FT + + +AC L H A G+ R +AL+ Y+ + +D+A
Sbjct: 105 VQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDA 164
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+ VF+ + V ++I+GF H G L F ML P+ ++
Sbjct: 165 LSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASI 224
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
S S G+ IH K V + ++ MY RCN + A F L +L+TW+ LI
Sbjct: 225 SSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLI 284
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GY ++ D ++L F ++ +G K + S+ AA A A + G +HG +++ GF+
Sbjct: 285 AGY-ERSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFD 343
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V + ++L+DMY+KCG + ++F M R+++++ ++++G G HG+ +A + F ++
Sbjct: 344 KNVALINSLIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHGYGKEAVKLFDEM 403
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
++ G+ PD F +LC C H GLV+ G + F M E+Y I E Y +V LLG AG
Sbjct: 404 VQSGIQPDRIVFMGVLCGCSHAGLVDKGLKYFRSMLEDYNINPDQEIYRCVVDLLGRAGR 463
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
+EEA+ + ++P D +V GALL C Y S+L + A ++ + P ++LS
Sbjct: 464 VEEAFQLVENMPFEPDESVWGALLGACKAYKLSNLGNLAAQRVLDRRPNMAGTYLLLSKI 523
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA +G+W + K+R + +KE G SW+
Sbjct: 524 YAAEGKWGEFAKMRKLMKGMNKKKEVGKSWI 554
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 159/333 (47%), Gaps = 3/333 (0%)
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+ ++ L+ +Y L EA +F+ + + D+V +MI GF C + ++ +F MLR
Sbjct: 43 SVWATNLIKSYFDKGLTREACNLFNEIPERDVVTWTAMIVGFTSCNHYHQAWTMFSEMLR 102
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY-ARCNCMN 257
P+ +T+ ++ LS G H K D YV + L+ MY A C M+
Sbjct: 103 SEVQPNAFTMSSVLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMD 162
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VFN + V+W+ LI G++ +GD L FR++ ++ + + A A
Sbjct: 163 DALSVFNDIPLKTAVSWTTLIAGFTHRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACA 222
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G IH V ++G V ++++DMY +C YL + F ++E+N+IT+N+
Sbjct: 223 SISSYSCGKQIHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNT 282
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G + ++ F + +G P+ TF+++ AC + +++ G+++ +
Sbjct: 283 LIAGYE-RSDSSESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRR- 340
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
G ++ + G++ +++ +P
Sbjct: 341 GFDKNVALINSLIDMYAKCGSISDSHKLFCDMP 373
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 203/462 (43%), Gaps = 53/462 (11%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQR 67
VL+ K ++LS H+L K + R + L+ +YA + + A +F+ P +
Sbjct: 115 VLKACKGMKALSCGALAHSLATKHGIDRSVYVQNALLDMYAASCATMDDALSVFNDIPLK 174
Query: 68 SVFLWNSIIRAYALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ W ++I + HR + L F+ +L + P++F+++ RAC+ S +
Sbjct: 175 TAVSWTTLIAGF--THRGDGYSGLLAFRQMLLEDVGPNSFSFSIAARACASISSYSCGKQ 232
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H GL D+ ++++ Y + + + +A + F +++ +L+ N++I+G+
Sbjct: 233 IHAAVTKYGLHCDAPVMNSILDMYCRCNYLCDAKRCFGELTEKNLITWNTLIAGYERSDS 292
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+SL LF M G P+ +T + + ++LS GQ +HG ++ FD + +
Sbjct: 293 -SESLSLFFQMGSEGYKPNCFTFTSITAACANLAVLSCGQQVHGGIVRRGFDKNVALINS 351
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKA 304
L+ MYA+C ++ ++ +F + DLV+W+ ++ GY G YGK A+ F ++ G +
Sbjct: 352 LIDMYAKCGSISDSHKLFCDMPGRDLVSWTTMMIGYGAHG-YGKEAVKLFDEMVQSGIQP 410
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D ++ VL S G + G++ F
Sbjct: 411 DRIVFMGVLCGC-----------------------------------SHAGLVDKGLKYF 435
Query: 365 ETMSERNIIT-----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+M E I Y V+ LG G +AF+ ++ PDES + ALL AC
Sbjct: 436 RSMLEDYNINPDQEIYRCVVDLLGRAGRVEEAFQLVENM---PFEPDESVWGALLGACKA 492
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
L N G R+ + A T Y+ + K+ G E
Sbjct: 493 YKLSNLGNLAAQRVLDRRPNMAGT--YLLLSKIYAAEGKWGE 532
>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
Length = 924
Score = 278 bits (710), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 281/528 (53%), Gaps = 3/528 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L K L + +V +Y+ L A++ F K ++V WN++I A++L
Sbjct: 270 IHGLAVKLGLSEEVMVNNAMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGD 329
Query: 85 FNDAKSLFKNLL--RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
N+A +L + + ++K + T + AC + L L+ +HG + + S
Sbjct: 330 VNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVEL-S 388
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A + AY+K ++ A KVF G+ D + N++I G A G K+L L M G+
Sbjct: 389 NAFILAYAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQ 448
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +T+ L+ L G+ IHG+ L++ ++ +V + L+S Y C +SA +
Sbjct: 449 PDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVL 508
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + +LV+W+A+I+GYSQ G ++L FRK +G ++ + I SV A ++ + +
Sbjct: 509 FDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSAL 568
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G HGYV++ V +++DMY+K G + +VF+ + ++N+ ++N++I+
Sbjct: 569 RLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAH 628
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG +A E + + + G PD T+ +L AC H GLV +G + F M I+ K
Sbjct: 629 GIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPK 688
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY ++ +L AG L++A + +P+ D + +LL C +G ++ E VA +L
Sbjct: 689 LEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWSSLLRSCRTFGALEIGEKVAKKLL 748
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E +P K V+LSN YA G+WD V ++R + + GL+K+AG SW+
Sbjct: 749 ELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIGLQKDAGCSWIE 796
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 221/427 (51%), Gaps = 6/427 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFY-ATKLVRLYALNNVLPSARILFDKTPQ 66
L+L+ + + + + LH V+ ++ R+ + T+L+++YA+ +R++FD
Sbjct: 48 LLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFDNMET 107
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRF 125
+++ WN+++ Y + D +F +L+ T +PDNFT+ + +AC D+
Sbjct: 108 KNLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEV 167
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG I GL D +ALV Y K +DEA+KVFD + + +LV NSMI F+ GF
Sbjct: 168 IHGMVIKMGLVLDVFVGNALVGMYGKCGAVDEAMKVFDFMPETNLVSWNSMICAFSENGF 227
Query: 186 WDKSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
S L ML G PD T+V ++ + +G GIHG +K V++
Sbjct: 228 SRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGLSEEVMVNN 287
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-- 302
+V MY++C +N A F + ++V+W+ +I+ +S +GD +A +++ +QG+
Sbjct: 288 AMVYMYSKCGYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEM 347
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
KA+ V I +VL A + +HGY +H F+ V +S+A + Y+KCG L +
Sbjct: 348 KANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQ-HVELSNAFILAYAKCGALNSAEK 406
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF + ++ + ++N++I G +G +A + G PD T S+LL AC H
Sbjct: 407 VFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKS 466
Query: 423 VNDGREI 429
+ G+EI
Sbjct: 467 LQYGKEI 473
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 10/268 (3%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL KE+H V + L D F T L+ Y SAR+LFD+ +++ WN++I
Sbjct: 465 KSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMI 524
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ ++ +LF+ L ++ + ACS+ S L + HG + +
Sbjct: 525 SGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQT 584
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ +++ Y+K I E+ KVFDG+ D ++ N++I G ++++L++ M
Sbjct: 585 EDAFVGCSIIDMYAKSGCIKESRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERM 644
Query: 197 LRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
++G+ PD +T +G++ +GL E L + + ++ + Y + L+ M A
Sbjct: 645 KKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFNLIEPKLEHY----ACLIDMLA 700
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALI 278
R ++ A + N + D WS+L+
Sbjct: 701 RAGRLDDALRLVNEMPEEADNRIWSSLL 728
>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1134
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 282/547 (51%), Gaps = 9/547 (1%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARILFDKTPQRSV 69
E S + + +E+HA + ++ L+ LV +Y + +A +F P +
Sbjct: 463 EFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPSKDT 522
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WNS+I RF +A S F + R + P NF+ +CS L R +HG
Sbjct: 523 VSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGE 582
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGFWDK 188
GL D S+AL+T Y++ I+E KVF + + D V NS I A + +
Sbjct: 583 GFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQ 642
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+ F M++ G P+ T + +++ + S+L +G IH LK S + + + L++
Sbjct: 643 ALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLA 702
Query: 249 MYARCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
Y +C M +F+ + D V+W+++I+GY G KA+ + +G+K D
Sbjct: 703 FYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGF 762
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
A+VL+A A A + G +H ++ E V+V SALVDMY+KCG + + FE M
Sbjct: 763 TFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELM 822
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
RNI ++NS+I G HG +A + F + + G +PD TF +L AC H GLV++G
Sbjct: 823 PVRNIYSWNSMISGYARHGHGQKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGY 882
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV---SGALLSC 484
+ F M E YG+ + EH+ MV LLG AG++++ FI ++ P+DP + L +C
Sbjct: 883 KHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIEDFIKTM--PMDPNILIWRTVLGAC 940
Query: 485 CHIYG-NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C G N++L + A L E +P+ V+LSN +A G W+DV++ R + ++K+
Sbjct: 941 CRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKD 1000
Query: 544 AGVSWVS 550
AG SWV+
Sbjct: 1001 AGCSWVN 1007
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 205/431 (47%), Gaps = 17/431 (3%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ SL LH + K D F+ L+ +Y L SAR LFD+ PQ+++ W+
Sbjct: 151 KTSSSLYDANHLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLVSWS 210
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGA 130
+I Y ++A SLFK ++ + L P++F RAC + G++ +H
Sbjct: 211 CLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGS-TGIKLGMQIHAFI 269
Query: 131 IVSGLGRDSITSSALVTAYSKLS-LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
D I S+ L++ YS S ID+A +VFD + + V NS+IS + G +
Sbjct: 270 CKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSA 329
Query: 190 LQLFDWM----LRLGKTPDEYTLVGLISG---LWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+LF M + L P+EYTL L++ L + L+ + Q + KS F YV
Sbjct: 330 FKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRI-EKSGFLRDLYV 388
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN---M 299
S LV+ +AR M+ A +F ++ + VT + L+ G ++Q +A F+++
Sbjct: 389 GSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVE 448
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLG 358
++ VL+++ + G +H Y+ + G + + + +ALV+MY KC +
Sbjct: 449 INSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAID 508
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
VF+ M ++ +++NS+I GL + +A F + G+ P + + L +C
Sbjct: 509 NACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCS 568
Query: 419 HGGLVNDGREI 429
G + GR+I
Sbjct: 569 SLGWLTLGRQI 579
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 1/217 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK-TPQR 67
+L S L ++HAL+ K S+ D L+ Y + I+F + + +R
Sbjct: 665 ILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERR 724
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
WNS+I Y + + A L +++ K D FT+A + AC+ + L VH
Sbjct: 725 DEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVH 784
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
A+ + L D + SALV Y+K ID A + F+ + ++ NSMISG+A G
Sbjct: 785 ACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGQ 844
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
K+L++F M + G++PD T VG++S L+ G
Sbjct: 845 KALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEG 881
>gi|125591533|gb|EAZ31883.1| hypothetical protein OsJ_16048 [Oryza sativa Japonica Group]
Length = 674
Score = 278 bits (710), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 288/537 (53%), Gaps = 14/537 (2%)
Query: 24 ELHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+L+ L+ K + D F + + +++ + SAR +FD+ +++ +WN++I Y
Sbjct: 103 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 162
Query: 82 AHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD-- 138
+F++A LF +L ++ P D T+ A S++ D+ + +HG ++ G+ R
Sbjct: 163 NGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHG-YLIKGMHRTLP 221
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
I +ALV YS+ + A +FD + + D+V N+M++ F F + L L M +
Sbjct: 222 VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQK 281
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G D TL ++S L +G+ HG+ ++ + + + S L+ MYA+ +
Sbjct: 282 SGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEG-EGLESYLIDMYAKSGRVEM 340
Query: 259 AYHVFNSLFHP--DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+S + D VTW+A+I GY+Q G KA+ FR + G + V +ASVL A
Sbjct: 341 AQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 400
Query: 317 AK-SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
V+ G IH + ++ + +V V +AL+DMYSKCG + VF M+ ++ +TY
Sbjct: 401 DPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTY 460
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++I GLG HGF +A F + EKGL PD TF + + AC + GLV++G ++ M +
Sbjct: 461 TTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSM-D 519
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD-PAVSGALLSCCHIYGNSDLA 494
+GI A +H+ + LL AG +EEAY FI L + + A+ G+LL+ C G +LA
Sbjct: 520 SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELA 579
Query: 495 EIVAHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++V +L + + + G Y V+LS A + W+ LR ++ GL+KEAG SW+
Sbjct: 580 KLVTKKLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWI 636
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 115/399 (28%), Positives = 207/399 (51%), Gaps = 16/399 (4%)
Query: 44 LVRLYALNNVLPSARI-----LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
L+ LYA + AR+ LFD P+R+V WN++ Y R +A LF +L
Sbjct: 18 LLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYVKTGRPQEALELFVRMLED 77
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS-GLG--RDSITSSALVTAYSKLSLI 155
+P ++ I A +D P F G +V G+ D S+ + +S+ +
Sbjct: 78 GFRPTPVSFVNIFPAAV--ADDPSWPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDV 135
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISG 214
A +VFD + + + N+MI+G+ G + +++ LF +L + P D T + ++
Sbjct: 136 QSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTA 195
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
+ +S+GQ +HG+ +K + + + LV MY+RC + +A+ +F+ L D+VT
Sbjct: 196 ASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVT 255
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+ ++T + Q + L ++ G AD V + +VL+A++ + ++ G HGY+I
Sbjct: 256 WNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLI 315
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM--SERNIITYNSVILGLGLHGFTYQA 391
+HG E + S L+DMY+K G + + +VF++ ++R+ +T+N++I G G +A
Sbjct: 316 RHGIE-GEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKA 374
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCH-GGLVNDGREI 429
FR ++E GL P T +++L AC GG V G++I
Sbjct: 375 ILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQI 413
>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
Length = 681
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 276/544 (50%), Gaps = 5/544 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ + L R K+LHAL+ A F LV +Y+ L A LFD PQR+
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W ++I + +F++A F + P F ++ RAC+ + + +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ G+G + S L YSK + +A KVF+ + D V +MI G++ G +++
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L F M+ T D++ L + G+ +H +K F+S +V + L
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 249 MYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY++ M SA +VF ++V+++ LI GY + K L F +L QG + +
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+S++ A A A + G +H V++ F+ VSS LVDMY KCG L IQ F+ +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAIQAFDEI 370
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ I +NS++ G HG A +FF ++++G+ P+ TF +LL C H GLV +G
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCC 485
+ F M + YG+ EHY ++ LLG AG L+EA FI + P +P G + L C
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM--PFEPNAFGWCSFLGAC 488
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+G+ ++ ++ A +L + +P+ V+LSN YA + +W+DV +R + D ++K G
Sbjct: 489 RIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPG 548
Query: 546 VSWV 549
SWV
Sbjct: 549 YSWV 552
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 110/214 (51%)
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D L +I + L G+ +H + + + ++++ LV+MY++C ++ A +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+++ +LV+W+A+I+G SQ + +A+ F + + G+ +S + A A ++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H ++ G + V S L DMYSKCG + +VFE M ++ +++ ++I G
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G +A F+ +I++ + D+ + L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
>gi|15232648|ref|NP_190263.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207666|sp|Q9STF3.1|PP265_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g46790, chloroplastic; AltName: Full=Protein
CHLORORESPIRATORY REDUCTION 2; Flags: Precursor
gi|5541680|emb|CAB51186.1| putative protein [Arabidopsis thaliana]
gi|110741961|dbj|BAE98921.1| hypothetical protein [Arabidopsis thaliana]
gi|332644684|gb|AEE78205.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 169/519 (32%), Positives = 273/519 (52%), Gaps = 19/519 (3%)
Query: 48 YALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDA--KSLFKN--------LLR 97
Y N LP + + K P SV L N I + A A N+ +SL K +L
Sbjct: 14 YHTVNFLPRSPL---KPPSCSVALNNPSISSGAGAKISNNQLIQSLCKEGKLKQAIRVLS 70
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
+ P TY + C S L VH + +G +D ++ L+ YS L +D
Sbjct: 71 QESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDY 130
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT----LVGLIS 213
A KVFD + + N++ G ++ L L+ M R+G D +T L ++
Sbjct: 131 ARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
+ L G+ IH + + S+ Y+ + LV MYAR C++ A +VF + ++V+
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVS 250
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVIHGY 331
WSA+I Y++ G +AL FR++ + K + P V + SVL A A A + G +IHGY
Sbjct: 251 WSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGY 310
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+++ G + + V SALV MY +CG L +G +VF+ M +R+++++NS+I G+HG+ +A
Sbjct: 311 ILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKA 370
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
+ F +++ G +P TF ++L AC H GLV +G+ +F M ++GI+ + EHY MV
Sbjct: 371 IQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVD 430
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
LLG A L+EA + + P V G+LL C I+GN +LAE + +LF +P+
Sbjct: 431 LLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGN 490
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L++ YAE WD+V +++ + GL+K G W+
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWME 529
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 202/432 (46%), Gaps = 12/432 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SLS +H + +DPF ATKL+ +Y+ + AR +FDKT +R++++WN++ R
Sbjct: 92 SLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFR 151
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTY-----ACITRACSENSDLPGLRFVHGGAIV 132
A LA + L+ + R ++ D FTY AC+ C+ N + G + +H
Sbjct: 152 ALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKG-KEIHAHLTR 210
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G + LV Y++ +D A VF G+ ++V ++MI+ +A G ++L+
Sbjct: 211 RGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRT 270
Query: 193 FDWMLRLGK--TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
F M+R K +P+ T+V ++ + L G+ IHG+ L+ DS V S LV+MY
Sbjct: 271 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 330
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
RC + VF+ + D+V+W++LI+ Y G KA+ F ++ G PV
Sbjct: 331 GRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM-S 368
SVL A + V G + + + HG + + + +VD+ + L ++ + M +
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E + S++ +HG A R + L P + LL + D +
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRLF--ALEPKNAGNYVLLADIYAEAQMWDEVK 508
Query: 429 IFTRMTEEYGIQ 440
++ E G+Q
Sbjct: 509 RVKKLLEHRGLQ 520
>gi|357138657|ref|XP_003570906.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Brachypodium distachyon]
Length = 608
Score = 277 bits (709), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 254/492 (51%), Gaps = 7/492 (1%)
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P + F +N +R +A + R A LF +LR L+PD +T + A + + P R
Sbjct: 78 PAPTAFSYNVTLRFFA-STRPRTALRLFLRMLRAALRPDAYTLPFLLLAAARAPEPPFAR 136
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
H GL T +LVT YS L A +VFDG+ D+V N+M+ + G
Sbjct: 137 SAHALLCRLGLQAHDHTVHSLVTMYSNLGDPLAARRVFDGIPRRDVVSWNAMMKAYERAG 196
Query: 185 FWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
++F M+ G P+E T+ +++ + L +G+ + + + + V
Sbjct: 197 MAADVARMFRDMIDEGAVAPNEVTVAVVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVG 256
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
S LV MY +C M A VF+ + H D+V W+A+ITGY+Q G +A+ F + +G
Sbjct: 257 SALVGMYEKCGEMTEARRVFDGIAHKDVVAWNAMITGYAQNGMSKEAIALFHSMRQEGAS 316
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D + + VL+A A + G + Y G +V V +ALVDMYSKCG L +QV
Sbjct: 317 PDKITLVGVLSACAAVGALELGTELDAYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQV 376
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQA---FEFFRDIIEKGLNPDESTFSALLCACCHG 420
F + +N T+N++I GL +G ++A FE R+ E+GL PD+ TF +L AC H
Sbjct: 377 FGKLPCKNEATWNALICGLAFNGRGHEAIRQFEVMRN--EEGLRPDDITFIGVLSACVHA 434
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GL+ DGR F +T E+ I K EHY MV LL AG+LEEA+ F+ +P D + GA
Sbjct: 435 GLLKDGRRWFNSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFVEKIPGKADAVMLGA 494
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LL+ C N +++E V +++ + +P V+ S YA R DD K+R + + G+
Sbjct: 495 LLAACRKCKNVEVSERVINRIMQLEPSNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGV 554
Query: 541 RKEAGVSWVSGS 552
K G SWV S
Sbjct: 555 SKIPGCSWVEVS 566
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 129/316 (40%), Gaps = 34/316 (10%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL + L + L V A + + LV +Y + AR +FD +
Sbjct: 223 VVLAACRDAGDLVLGRWLEEWVRSAEIEVGSLVGSALVGMYEKCGEMTEARRVFDGIAHK 282
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V WN++I YA +A +LF ++ + PD T + AC+ L +
Sbjct: 283 DVVAWNAMITGYAQNGMSKEAIALFHSMRQEGASPDKITLVGVLSACAAVGALELGTELD 342
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
A GL + +ALV YSK +D+A++VF + + N++I G A G
Sbjct: 343 AYASHRGLYGNVYVGTALVDMYSKCGDLDKAVQVFGKLPCKNEATWNALICGLAFNGRGH 402
Query: 188 KSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++++ F+ M G PD+ T +G++S LL G+
Sbjct: 403 EAIRQFEVMRNEEGLRPDDITFIGVLSACVHAGLLKDGRRWF------------------ 444
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
N + S + + P + +S ++ ++ G +A + K+ KAD
Sbjct: 445 -------NSLTSEFQII-----PKIEHYSCMVDLLARAGHLEEAWDFVEKIP---GKADA 489
Query: 307 VLIASVLAAAAKSANV 322
V++ ++LAA K NV
Sbjct: 490 VMLGALLAACRKCKNV 505
>gi|87241511|gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 276/547 (50%), Gaps = 7/547 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
FL+L L K S +++H S+ + ++ + +L + S I TP
Sbjct: 22 FLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSI---SLKDFTYSTLIFSHITPH 78
Query: 67 RSVFLWNSIIRAYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ + +N ++RA H + L+ + + P+NFT+ + AC+ ++ R
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
H GL D T +++VT Y + A KVFD +++ DLV NS++SG+A GF
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGF 198
Query: 186 WDKSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+++++F + G PDE +LV ++ E L +G+ + GF ++ Y+ S
Sbjct: 199 AREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGS 258
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+SMY++C + S+ +F+ + D +TW+A I+ Y+Q G +A+ F + G
Sbjct: 259 ALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDP 318
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ V + +VL+A A + G + Y G + + V++AL+DMY+KCG L +VF
Sbjct: 319 NKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVF 378
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGL 422
M +N ++N++I L HG +A F + ++G P++ TF +LL AC H GL
Sbjct: 379 NDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGL 438
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V++G +F M+ +G+ K EHY MV LL AG+L EA+ I +P+ D GAL
Sbjct: 439 VDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALH 498
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
S C N D+ E V L E DP ++ S Y WDD ++R + +NG+ K
Sbjct: 499 SACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTK 558
Query: 543 EAGVSWV 549
G SW+
Sbjct: 559 TPGCSWI 565
>gi|357449413|ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 702
Score = 277 bits (709), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 166/547 (30%), Positives = 276/547 (50%), Gaps = 7/547 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
FL+L L K S +++H S+ + ++ + +L + S I TP
Sbjct: 22 FLLLSLLKQCPSTKTLQQIHTQFTIHSIHKPNHLLSQSI---SLKDFTYSTLIFSHITPH 78
Query: 67 RSVFLWNSIIRAYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ + +N ++RA H + L+ + + P+NFT+ + AC+ ++ R
Sbjct: 79 PNDYAFNIMLRATTTTWHDYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARL 138
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
H GL D T +++VT Y + A KVFD +++ DLV NS++SG+A GF
Sbjct: 139 AHCEVFKLGLDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGF 198
Query: 186 WDKSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+++++F + G PDE +LV ++ E L +G+ + GF ++ Y+ S
Sbjct: 199 AREAVEVFGRLREESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGS 258
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+SMY++C + S+ +F+ + D +TW+A I+ Y+Q G +A+ F + G
Sbjct: 259 ALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDP 318
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ V + +VL+A A + G + Y G + + V++AL+DMY+KCG L +VF
Sbjct: 319 NKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQRVF 378
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGL 422
M +N ++N++I L HG +A F + ++G P++ TF +LL AC H GL
Sbjct: 379 NDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDITFVSLLSACVHAGL 438
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V++G +F M+ +G+ K EHY MV LL AG+L EA+ I +P+ D GAL
Sbjct: 439 VDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWDVIEKMPEKPDNVTLGALH 498
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
S C N D+ E V L E DP ++ S Y WDD ++R + +NG+ K
Sbjct: 499 SACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNMWDDAARMRALMRENGVTK 558
Query: 543 EAGVSWV 549
G SW+
Sbjct: 559 TPGCSWI 565
>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
Length = 694
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 293/563 (52%), Gaps = 39/563 (6%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQRSVFLWNSII 76
S + +HA + K L + +KL+ ++ + P A +FD + ++ +WN++
Sbjct: 2 SSVRXIHAQMIKTGLHNTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWNTMF 61
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R +AL+ A L+ ++ L PD++T+ + ++C+++ + +HG + G
Sbjct: 62 RGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFD 121
Query: 137 -------------------------------RDSITSSALVTAYSKLSLIDEAIKVFDGV 165
RD ++ +AL+ Y I+ A K+FD +
Sbjct: 122 LDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEI 181
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVG 224
D+V N+MISG+ G + ++L+LF M+ + PDE T+V ++S + + +G
Sbjct: 182 PGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELG 241
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +H + F S + + L+ +Y++ + +A +F+ L++ D+++W+ LI GY+
Sbjct: 242 RHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGGYTHM 301
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
Y +AL F+++ G+ + V + S+L A A + G IH Y+ + + VS
Sbjct: 302 NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVS 361
Query: 345 S---ALVDMYSKCGYLGLGIQVFET-MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
S +L+DMY+KCG + QVF++ MS R++ T+N++I G +HG AF+ F +
Sbjct: 362 SLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRM 421
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G+ PD+ TF LL AC H G+++ GR IF MT Y I K EHY M+ LLG +G +
Sbjct: 422 NGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHYGCMIDLLGHSGLFK 481
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
EA I ++P D + +LL C I+GN +L E A +L + +P V+LSN YA
Sbjct: 482 EAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGSYVLLSNIYA 541
Query: 521 EDGRWDDVMKLRDDIVDNGLRKE 543
GRW++V K+R + D G++K+
Sbjct: 542 AAGRWNEVAKIRALLNDKGMKKK 564
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 139/313 (44%), Gaps = 16/313 (5%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ + +H+ + + L+ LY+ + +A LFD + V WN++I
Sbjct: 237 SIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIG 296
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH---GGAIVSG 134
Y + + +A LF+ +LR+ P++ T I AC+ + R++H +
Sbjct: 297 GYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGV 356
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
+ S ++L+ Y+K ID A +VFD +S+ L N+MISGFA G + + +F
Sbjct: 357 VTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIF 416
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSSVLVS 248
M G PD+ T VGL+S +L +G+ I G+ + + Y ++
Sbjct: 417 SRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRGYEITPKLEHY----GCMID 472
Query: 249 MYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNM--QGKKAD 305
+ A + N++ PD V W +L+ G+ + +KL G
Sbjct: 473 LLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESFAKKLIKIEPGNSGS 532
Query: 306 PVLIASVLAAAAK 318
VL++++ AAA +
Sbjct: 533 YVLLSNIYAAAGR 545
>gi|449451271|ref|XP_004143385.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 623
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 259/483 (53%), Gaps = 6/483 (1%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP--GLRFVHGG 129
WN+ +R A +F A SL+ +LR +P+ FT+ ++C+ S LP G +F HG
Sbjct: 17 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALS-LPILGSQF-HGQ 74
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLC-NSMISGFAHCGFWD 187
G + + L++ Y K SL+D A KVF+ L +C N+++SG+
Sbjct: 75 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 134
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ LF M G + TL+GLI P L +G +H LK FDS V + +
Sbjct: 135 EAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 194
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MY +C +N A +F+ + L++W+A+++GY+Q G L +R ++M G DPV
Sbjct: 195 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 254
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ VL++ A G + + GF + +++AL++MY++CG L VF+ M
Sbjct: 255 TLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 314
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ER ++++ ++I G G+HG A + F+++I G+ PD + F +L AC H GL + G
Sbjct: 315 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 374
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
E F M Y ++ EHY MV LLG AG L+EA + I S+P D AV GALL C I
Sbjct: 375 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 434
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ N +LAE+ ++ E +P Y V+LSN Y+ V+++R + + L+K+ G S
Sbjct: 435 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 494
Query: 548 WVS 550
+V
Sbjct: 495 YVE 497
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 10/260 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K D + +Y + A+ LFD+ P + + WN+++ YA
Sbjct: 174 LHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGL 233
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ L++N+ + PD T + +C+ V SG + ++A
Sbjct: 234 ATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKIQASGFTSNPFLNNA 293
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y++ + +A VFDG+ + LV ++I G+ G + ++QLF M+R G PD
Sbjct: 294 LINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPD 353
Query: 205 EYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
V ++S GL + L + L+ + Y S +V + R + A
Sbjct: 354 GTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHY----SCMVDLLGRAGRLKEA 409
Query: 260 YHVFNSL-FHPDLVTWSALI 278
+ S+ PD W AL+
Sbjct: 410 QTLIESMPIKPDGAVWGALL 429
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+ + + +PF L+ +YA L A+ +FD P+R++ W +II Y +
Sbjct: 274 EVEFKIQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHG 333
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A LFK ++R+ ++PD + C+ ACS
Sbjct: 334 HGEIAVQLFKEMIRSGIEPDGTAFVCVLSACS 365
>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1125
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 168/536 (31%), Positives = 274/536 (51%), Gaps = 4/536 (0%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S Q L + LH L+ K+ L + L+ +YA A ++F P R + WNS
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNS 523
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
++ ++ +++ A L +L+T+ + T+ AC +L L+ VH I
Sbjct: 524 MMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACY---NLEKLKIVHAFVIHFA 580
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + I + LVT Y K L+DEA KV + + D+V N++I G A + ++Q F+
Sbjct: 581 VHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFN 640
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M R G + T+V L+ P LL G IH + + F+ YV S L++MYA+C
Sbjct: 641 LMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQC 700
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+N++ ++F+ L + + TW+A+ + + G +AL + ++ G D + L
Sbjct: 701 GDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVAL 760
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A + G +H ++I+ GFEL V +A +DMY KCG + ++ R+
Sbjct: 761 ATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKR 820
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++N +I L HGF QA E F ++++ GL PD TF +LL AC HGGLV++G F+ M
Sbjct: 821 SWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSM 880
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
T E+G+ EH + ++ LLG +G L EA FI +P P + V +LL+ C ++GN +L
Sbjct: 881 TSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLEL 940
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +LFE + + V+ SN A RW DV +R + L+K+ SW+
Sbjct: 941 GRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWI 996
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 193/399 (48%), Gaps = 10/399 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V K L+ + F T L+ Y + + A LF++ + ++ W S++ YA
Sbjct: 269 RQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADN 328
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT- 141
+ +++++L L T A + R C D + G I SGL S++
Sbjct: 329 GHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSV 388
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++L++ + ++EA +VF+ + + D + NS+I+ AH G +++SL F WM R
Sbjct: 389 ANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHP 448
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D T+ L+ L G+G+HG KS +S V + L+SMYA+ A
Sbjct: 449 KTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAEL 508
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+++ DL++W++++ + + G Y A+ ++ K + V + L+A N
Sbjct: 509 VFHTMPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSAC---YN 565
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ ++H +VI ++++ + LV MY K G + +V + M ER+++T+N++I G
Sbjct: 566 LEKLKIVHAFVIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGG 625
Query: 382 LGLH---GFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
T QAF R +GL + T LL C
Sbjct: 626 HADDKDPNATIQAFNLMR---REGLLSNYITIVNLLGTC 661
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 193/397 (48%), Gaps = 2/397 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LHAL K + ++ FY LV +Y+ + A+ +FDK R+ WN++I +
Sbjct: 167 KALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRV 226
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLGRDSIT 141
++ A F ++ + P ++ A + AC + + G R +HG + GL +
Sbjct: 227 GWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFV 286
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L+ Y + EA K+F+ + +P++V S++ +A G + L ++ + G
Sbjct: 287 GTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGL 346
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNCMNSAY 260
T+ +I ++G I G +KS D+ V++ L+SM+ + + A
Sbjct: 347 ICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEAS 406
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VFN++ D ++W+++IT + G + ++L +F + K D + I+++L A +
Sbjct: 407 RVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQ 466
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G +HG + + G E +V V ++L+ MY++ G VF TM R++I++NS++
Sbjct: 467 HLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMA 526
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G A ++++ + TF+ L AC
Sbjct: 527 SHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSAC 563
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 165/349 (47%), Gaps = 3/349 (0%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +H + + +++ ++ LV YSK I A VFD + D + N+MISGF
Sbjct: 167 KALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVRV 226
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG-QGIHGFCLKSSFDSYDYV 242
G++ K++Q F M G TP Y + +++ ++ G + IHG+ +K S +V
Sbjct: 227 GWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFV 286
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+ Y ++ A +F + P++V+W++L+ Y+ G + L +R L G
Sbjct: 287 GTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGL 346
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-SVMVSSALVDMYSKCGYLGLGI 361
+A+V+ + G I G VI+ G + SV V+++L+ M+ +
Sbjct: 347 ICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEAS 406
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF M ER+ I++NS+I +G ++ F + D T SALL AC
Sbjct: 407 RVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQ 466
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+ GR + +T+ G+++ ++ + AG+ E+A ++P
Sbjct: 467 HLKWGRGLHGLITKS-GLESNVCVCNSLLSMYAQAGSSEDAELVFHTMP 514
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 110/208 (52%), Gaps = 1/208 (0%)
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
L G E S +VG+ +H C+K + ++ LV+MY++ + A HVF+ ++ +
Sbjct: 153 LQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRN 212
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGA-VIH 329
+W+ +I+G+ + G Y KA+ +F + G +IAS++ A +S + GA IH
Sbjct: 213 DASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIH 272
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
GYV++ G +V V ++L+ Y G + ++FE + E NI+++ S+++ +G T
Sbjct: 273 GYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHTK 332
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ +R + GL +T + ++ C
Sbjct: 333 EVLNIYRHLRHNGLICTGNTMATVIRTC 360
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%)
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H ++ + + ++ LV+MYSK G + VF+ M +RN ++N++I G
Sbjct: 166 GKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRNDASWNNMISGFVR 225
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G+ ++A +FF + E G+ P ++++ AC G + +G + G+ +
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVF 285
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
++ G G++ EA + +P
Sbjct: 286 VGTSLLHFYGTHGSVSEANKLFEEIEEP 313
>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 685
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 271/533 (50%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+ + K++H + L D F L++ + +LF T ++FL+N++I
Sbjct: 25 TFNHLKQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFPNIFLYNTLIN 84
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ H F++ LF ++ + L FT+ + +AC+ S+ +H + G
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNH 144
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D ++L++ YS +++A KVF+ + + +V ++ SG+ G +++ LF M+
Sbjct: 145 DVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHREAIDLFKKMV 204
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+G PD Y +V ++S L G+ I + +V + LV++YA+C M
Sbjct: 205 EMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKME 264
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+S+ D+VTWS +I GY+ + + +F ++ + K D I L++ A
Sbjct: 265 KARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCA 324
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G + +H F ++ +++AL+DMY+KCG + G +VF+ M E++I+ N+
Sbjct: 325 SLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNA 384
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
I GL +G +F F + G++PD STF LLC C H GL+ DG F ++ Y
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
++ EHY MV L G AG L++AY I +P + V GALLS C + ++ LAE V
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETV 504
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L +P V LSN Y+ GRWD+ ++RD + G++K G SW+
Sbjct: 505 LKELIALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIE 557
>gi|297606175|ref|NP_001058069.2| Os06g0613100 [Oryza sativa Japonica Group]
gi|255677226|dbj|BAF19983.2| Os06g0613100 [Oryza sativa Japonica Group]
Length = 590
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 250/443 (56%), Gaps = 1/443 (0%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y AC E L R VH I + + LVT Y + +D+A V D +
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ +V +MISG++ ++L LF MLR G P+EYTL +++ P + G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H +K++F+S+ +V S L+ MYA+ + A VF++L D+V+ +A+I+GY+Q+G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+AL FR+L +G + + V +++ A + A++ G +H +++ V + ++
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+DMYSKCG L +VF+ M ER+++++N++++G G HG ++ F+D + K + PD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPD 311
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
T A+L C HGGLV++G +IF + +E T HY ++ LLG +G LE+A + I
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
++P P++ G+LL C ++ N + E+VA +L E +P V+LSN YA G W
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431
Query: 527 DVMKLRDDIVDNGLRKEAGVSWV 549
DV K+R +++ + KE G SW+
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWI 454
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 174/355 (49%), Gaps = 8/355 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L +++HA + A F T+LV +Y L AR + D+ P+RSV W ++I
Sbjct: 24 RALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMI 83
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ R +A LF +LR P+ +T A + +CS + + VH + +
Sbjct: 84 SGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFE 143
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S+L+ Y+K I EA +VFD + + D+V C ++ISG+A G +++L LF +
Sbjct: 144 SHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL 203
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G + T L++ L + L G+ +H L+ + + + L+ MY++C +
Sbjct: 204 YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKL 263
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ VF+++ +V+W+A++ GY + G + + F+ L+ + K D V + +VL+
Sbjct: 264 LYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGC 322
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSA----LVDMYSKCGYLGLGIQVFETM 367
+ V G I V++ E S ++ + ++D+ + G L + + E M
Sbjct: 323 SHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM 374
>gi|296082238|emb|CBI21243.3| unnamed protein product [Vitis vinifera]
Length = 778
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 167/539 (30%), Positives = 273/539 (50%), Gaps = 12/539 (2%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
+ L K +L K LHA + K+ L P T L+ YA + A LF + +V
Sbjct: 8 IALIKQCVTLEALKSLHASILKSHL--HPHLCTSLIAQYASLGSISHAYALFSTSHSSNV 65
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
FLWN IIRA++ ++ L+ +L+ ++ NFT+ + +AC +D H
Sbjct: 66 FLWNHIIRAFSNTPHSRNSLRLYSRMLQLGIQATNFTFPFLLKACGCLADFELGARAHAH 125
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
+V G D +++L+ Y + D + +VF+ + + ++V +SM+ +AH G +++
Sbjct: 126 VVVFGYESDVFVANSLMAMYGRFGCFDFSRQVFERMPERNVVSWSSMVGAYAHNGRYEEG 185
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC---LKSSFDSYDYVSSVL 246
L LF ML G P+ ++V ++ + FC + + DS V +
Sbjct: 186 LLLFWRMLNEGIAPNRGSIVNAMACIHRE------HEADDFCRVVIDNGLDSDQSVQNAA 239
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYARC ++ A F + DLV W+++I Y Q AL F+++ + G D
Sbjct: 240 MGMYARCGRIDVARRFFYGILDKDLVAWTSMIEAYVQADLPINALELFKQMKLLGIVPDS 299
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + S++ A + A+ +HG + + F+ + + +A++D+Y KCG L + F+
Sbjct: 300 VTLLSLIHAVSNLASFQLARFVHGVITRSFFKNHIALDTAVIDLYVKCGNLEYARKCFDR 359
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
MS RN+I+++++I G G+HG +A F D ++ + PD F +L AC HGGL+ +G
Sbjct: 360 MSARNLISWSTMISGYGMHGHGREALCLF-DQMKASIKPDHIAFVMVLSACSHGGLIAEG 418
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
E F M ++G+ +TEHY MV LLG AG L EA +FI +P D V GALL C
Sbjct: 419 WECFKAMNRDFGVTPRTEHYACMVDLLGRAGRLSEAQAFIERMPITPDAGVWGALLGACR 478
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+ N + AE A LF D ++LSN YA G+ + +R + G+RK G
Sbjct: 479 IHSNLETAETAARHLFNLDAENPGRYILLSNIYASSGKRKEADDIRALMKSRGVRKTVG 537
>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 277/535 (51%), Gaps = 13/535 (2%)
Query: 25 LHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
L+ LV K + + D F + + +YA + AR +FD +R+ +WN++I Y
Sbjct: 240 LYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQN 299
Query: 83 HRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ +A LF ++ + Q D+ T+ A S+ L R +H + S +
Sbjct: 300 NCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQVVI 359
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+A++ YS+ I + KVF + + D+V N+M+S F G D+ L L M + G
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQKQGF 419
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D TL L+S +G+ H + ++ ++ + L+ MYA+ + +A
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ-FEGMDGYLIDMYAKSGLITTAQQ 478
Query: 262 VF--NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F NS + D TW+A+I GY+Q G + FRK+ Q + + V +AS+L A
Sbjct: 479 LFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPM 538
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G IHG+ I+ +V V +AL+DMYSK G + VF E+N +TY ++I
Sbjct: 539 GTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMI 598
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
L G HG +A F ++ G+ PD TF A+L AC + GLV++G IF M EY I
Sbjct: 599 LSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKI 658
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVA 498
Q +EHY + +LG G + EAY F+ L + + + G+LL C I+G +L ++VA
Sbjct: 659 QPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNTFRIWGSLLGACRIHGEFELGKVVA 718
Query: 499 HQLFENDPRKGA----YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++L E + KG+ Y V+LSN YA +G WD+V ++R ++ GL KEAG SWV
Sbjct: 719 NKLLEME--KGSXLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWV 771
Score = 165 bits (418), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 198/379 (52%), Gaps = 10/379 (2%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
R +FD +R+V WN++I Y R +A +F+ ++R ++P ++ + A
Sbjct: 172 RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRM 231
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITS----SALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
+D ++G +V LG D + S+ + Y++L +D A ++FD + + +
Sbjct: 232 NDYDNANVLYG--LVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+MI G+ +++ LF ++ + D+ T + ++ + + L +G+ +H + L
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYIL 349
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
KSS + + ++ MY+RC + +++ VF+++ D+VTW+ +++ + Q G + L
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLM 409
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
++ QG D V + ++L+ A+ + G H Y+I+HG + M L+DMY+
Sbjct: 410 LVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGM-DGYLIDMYA 468
Query: 353 KCGYLGLGIQVFETMS--ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
K G + Q+FE S +R+ T+N++I G +G + + F FR +IE+ + P+ T
Sbjct: 469 KSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTL 528
Query: 411 SALLCACCHGGLVNDGREI 429
+++L AC G + G++I
Sbjct: 529 ASILPACNPMGTIGLGKQI 547
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 198/424 (46%), Gaps = 33/424 (7%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP--DNFTYACITRACSEN 117
LFD P+ + LWN+II + + DA LF +R P D++T++ +AC++
Sbjct: 59 LFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASPSPKFDSYTFSSTLKACAQA 117
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK-------------LSLIDEAIKVFDG 164
L + +H + S G I ++L+ YS + D +VFD
Sbjct: 118 RSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDT 177
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ ++V N+MIS + ++ ++F M+R+G P + V + +W +
Sbjct: 178 MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMNDYDNA 237
Query: 225 QGIHGFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
++G +K D D +V S + MYA C++ A +F+ + W+ +I GY
Sbjct: 238 NVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYV 297
Query: 283 QQGDYGKALYYFRKLNMQGKK--ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Q +A+ F ++ M+ ++ D V S L A ++ + G +H Y+++ L
Sbjct: 298 QNNCPIEAIDLFVQV-MESEQFXLDDVTFLSALTAISQLQWLDLGRQLHAYILKSSTILQ 356
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V++ +A++ MYS+CG +G +VF M ER+++T+N+++ +G + ++ +
Sbjct: 357 VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFEMQK 416
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+G D T +ALL L ++ R ++E G QA + ++ G+ G L
Sbjct: 417 QGFMVDSVTLTALL------SLASNLR------SQEIGKQAHAYLIRHGIQFEGMDGYLI 464
Query: 461 EAYS 464
+ Y+
Sbjct: 465 DMYA 468
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 21/292 (7%)
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP--DEYTLVGLISG 214
+A+ +FD + P VL N++I GF C LF +R +P D YT +
Sbjct: 55 QALHLFDSIPRPTTVLWNTIIIGFI-CNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--------------NCMNSAY 260
+ L +G+ +H L+S F S V + L++MY+ C NC +
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC-DLVR 172
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+++ ++V W+ +I+ Y + +A FR + G + PV +V A +
Sbjct: 173 RVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMN 232
Query: 321 NVWPGAVIHGYVIQHGFEL--SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ V++G V++ G + V S+ + MY++ G + ++F+ ERN +N++
Sbjct: 233 DYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTM 292
Query: 379 ILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREI 429
I G + +A + F ++E + D+ TF + L A ++ GR++
Sbjct: 293 IGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLDLGRQL 344
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 257 NSAYHVFNSLFHPDLVTWSALITGY-SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A H+F+S+ P V W+ +I G+ L+Y R K D +S L A
Sbjct: 54 HQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC----GYLG---------LGIQ 362
A++ ++ G +H +V++ F S +V ++L++MYS C YLG L +
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRR 173
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
VF+TM +RN++ +N++I +AF+ FR ++ G+ P +F
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H + L ++ F T L+ +Y+ + + A +F +T +++ + ++I +Y
Sbjct: 545 KQIHGFAIRCFLNQNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMILSYGQH 604
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A SLF +L + +KPD+ T+ I ACS
Sbjct: 605 GMGERALSLFHAMLGSGIKPDSVTFVAILSACS 637
>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
Length = 583
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 250/443 (56%), Gaps = 1/443 (0%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y AC E L R VH I + + LVT Y + +D+A V D +
Sbjct: 13 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 72
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ +V +MISG++ ++L LF MLR G P+EYTL +++ P + G+
Sbjct: 73 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H +K++F+S+ +V S L+ MYA+ + A VF++L D+V+ +A+I+GY+Q+G
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+AL FR+L +G + + V +++ A + A++ G +H +++ V + ++
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+DMYSKCG L +VF+ M ER+++++N++++G G HG ++ F+D + K + PD
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPD 311
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
T A+L C HGGLV++G +IF + +E T HY ++ LLG +G LE+A + I
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
++P P++ G+LL C ++ N + E+VA +L E +P V+LSN YA G W
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431
Query: 527 DVMKLRDDIVDNGLRKEAGVSWV 549
DV K+R +++ + KE G SW+
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWI 454
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 174/355 (49%), Gaps = 8/355 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L +++HA + A F T+LV +Y L AR + D+ P+RSV W ++I
Sbjct: 24 RALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMI 83
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ R +A LF +LR P+ +T A + +CS + + VH + +
Sbjct: 84 SGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFE 143
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S+L+ Y+K I EA +VFD + + D+V C ++ISG+A G +++L LF +
Sbjct: 144 SHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL 203
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G + T L++ L + L G+ +H L+ + + + L+ MY++C +
Sbjct: 204 YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKL 263
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ VF+++ +V+W+A++ GY + G + + F+ L+ + K D V + +VL+
Sbjct: 264 LYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGC 322
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSA----LVDMYSKCGYLGLGIQVFETM 367
+ V G I V++ E S ++ + ++D+ + G L + + E M
Sbjct: 323 SHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM 374
>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 1135
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 283/555 (50%), Gaps = 28/555 (5%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA + LR + LV +YA + A+ LF + + WN++I + +
Sbjct: 454 KQVHAYTLRNGDLRT-YTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQN 512
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSIT 141
RF +A ++ ++PD T A + ACS+ L R +H A+ +G L +S
Sbjct: 513 DRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFV 572
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ALV Y + VFDGV + + N++++G+A F D++L+LF M+ +
Sbjct: 573 GTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESE 632
Query: 202 -TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P+ T ++ + S +GIHG+ +K F YV + L+ MY+R + +
Sbjct: 633 FCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISK 692
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM-QGK----------------- 302
+F + D+V+W+ +ITG G Y AL ++ QG+
Sbjct: 693 TIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTFVDYEDDGGVPF 752
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K + V + +VL A A + G IH Y ++ + V V SALVDMY+KCG L L +
Sbjct: 753 KPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASR 812
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG------LNPDESTFSALLCA 416
VF+ M RN+IT+N +I+ G+HG +A E FR + G + P+E T+ A+ A
Sbjct: 813 VFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAA 872
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C H G+V++G +F M +G++ + +HY +V LLG +G ++EAY I ++P ++
Sbjct: 873 CSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYELINTMPSNLNKV 932
Query: 477 VS-GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ +LL C I+ + + EI A LF +P ++ V++SN Y+ G WD + +R +
Sbjct: 933 DAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGLWDQALGVRKKM 992
Query: 536 VDNGLRKEAGVSWVS 550
+ G+RKE G SW+
Sbjct: 993 KEMGVRKEPGCSWIE 1007
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 181/369 (49%), Gaps = 6/369 (1%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+RS W ++R+ + F DA S + +L PDNF + + +A + DL +
Sbjct: 292 RRSPSQWIDLLRSQTHSSSFRDAISTYAAMLAAPAPPDNFAFPAVLKAAAAVHDLCLGKQ 351
Query: 126 VHGGAIVSGLGRDS--ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H G S +++LV Y K + A +VFD + D D V NSMI+
Sbjct: 352 IHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPDRDHVSWNSMIATLCRF 411
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE-PSLLSVGQGIHGFCLKSSFDSYDYV 242
W+ SL LF ML P +TLV + + +G+ +H + L++ D Y
Sbjct: 412 EEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGVRLGKQVHAYTLRNG-DLRTYT 470
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
++ LV+MYAR +N A +F DLV+W+ +I+ SQ + +AL Y + + G
Sbjct: 471 NNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQNDRFEEALMYVYLMIVDGV 530
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-SVMVSSALVDMYSKCGYLGLGI 361
+ D V +ASVL A ++ + G IH Y +++G + + V +ALVDMY C G
Sbjct: 531 RPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFVGTALVDMYCNCKQPKKGR 590
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHG 420
VF+ + R + +N+++ G + F QA F ++I E P+ +TF+++L AC
Sbjct: 591 LVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESEFCPNATTFASVLPACVRC 650
Query: 421 GLVNDGREI 429
+ +D I
Sbjct: 651 KVFSDKEGI 659
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 131/505 (25%), Positives = 225/505 (44%), Gaps = 35/505 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
VL+ + + L K++HA V K + A LV +Y L +AR +FD P
Sbjct: 336 VLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFDDIPD 395
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF- 125
R WNS+I + + LF+ +L + P +FT + ACS G+R
Sbjct: 396 RDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRG--GVRLG 453
Query: 126 --VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
VH + +G R + T++ALVT Y++L +++A +F DLV N++IS +
Sbjct: 454 KQVHAYTLRNGDLR-TYTNNALVTMYARLGRVNDAKALFGVFDGKDLVSWNTVISSLSQN 512
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-SFDSYDYV 242
++++L M+ G PD TL ++ + L +G+ IH + L++ +V
Sbjct: 513 DRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGDLIENSFV 572
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV MY C VF+ + + W+AL+ GY++ +AL F ++ + +
Sbjct: 573 GTALVDMYCNCKQPKKGRLVFDGVVRRTVAVWNALLAGYARNEFDDQALRLFVEMISESE 632
Query: 303 -KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ ASVL A + IHGY+++ GF V +AL+DMYS+ G + +
Sbjct: 633 FCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDMYSRMGRVEISK 692
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+F M++R+I+++N++I G + G A ++ + G
Sbjct: 693 TIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRR-----------------QG- 734
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA-----GNLEEAYSFIWSLPKPVDPA 476
DG + F ++ G+ K M L G A G +E +++ +D A
Sbjct: 735 --EDGSDTFVDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVA 792
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQL 501
V AL+ G +LA V Q+
Sbjct: 793 VGSALVDMYAKCGCLNLASRVFDQM 817
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 7/153 (4%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + KE+HA K L D + LV +YA L A +FD+ P R+V WN +I
Sbjct: 771 ALGKGKEIHAYAVKQKLAMDVAVGSALVDMYAKCGCLNLASRVFDQMPIRNVITWNVLIM 830
Query: 78 AYALAHRFNDAKSLFKNLL------RTQLKPDNFTYACITRACSENSDL-PGLRFVHGGA 130
AY + + +A LF+ + R ++P+ TY I ACS + + GL H
Sbjct: 831 AYGMHGKGEEALELFRIMTAGGGSNREVIRPNEVTYIAIFAACSHSGMVDEGLHLFHTMK 890
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
G+ + LV + + EA ++ +
Sbjct: 891 ASHGVEPRGDHYACLVDLLGRSGRVKEAYELIN 923
>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/563 (29%), Positives = 289/563 (51%), Gaps = 39/563 (6%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
HA + K L + +KL+ L ++ + LP A +F+ + ++ +WN+++R A +
Sbjct: 2 HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETXQEPNLLIWNTMLRGLASS 61
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL------- 135
++ ++ P+ +T+ + ++C+++ R +H + G
Sbjct: 62 SDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYAH 121
Query: 136 ------------------------GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
RD ++ +AL+T Y+ + A KVFD +++ D+V
Sbjct: 122 TSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRGDVRSARKVFDXITERDVV 181
Query: 172 LCNSMISGFA-HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
N+MI+G+ +CG+ +++L+LF M+R PDE TLV ++S + + +G+ IH
Sbjct: 182 SWNAMITGYVENCGY-EEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTL 240
Query: 231 CLKS-SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
F S + + + +Y++C + A +F L D+V+W+ LI GY+ Y +
Sbjct: 241 VDDHHGFGSSLKIVNAFIGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKE 300
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH--GFELSVMVSSAL 347
AL F+++ G+ + V + SVL A A + G IH Y+ + G + ++L
Sbjct: 301 ALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSL 360
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+DMY+KCG + QVF +M +++ ++N++I G +HG AF+ F + + G+ PD+
Sbjct: 361 IDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDD 420
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
T LL AC H GL++ GR IF +T++Y I K EHY M+ LLG AG +EA I
Sbjct: 421 ITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEAEEIIH 480
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
+P D + +LL C ++GN +LAE A +L E +P V+LSN YA GRW+D
Sbjct: 481 MMPMEPDGVIWCSLLKACKMHGNLELAESFAQKLMEIEPENSGSYVLLSNIYATAGRWED 540
Query: 528 VMKLRDDIVDNGLRKEAGVSWVS 550
V ++R+ + G++K G S +
Sbjct: 541 VARIREVLNGKGMKKVPGCSSIE 563
>gi|15226737|ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g40720
gi|330254774|gb|AEC09868.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/532 (31%), Positives = 272/532 (51%), Gaps = 2/532 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V K L DP+ T L+ +Y+ ++ A +F + + +WN+++ AYA
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN 351
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A LF + + + PD+FT + + CS + VH + S
Sbjct: 352 DYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIE 411
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL+T YSK +A VF + + D+V S+ISG G + ++L++F M +
Sbjct: 412 SALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDS 471
Query: 203 --PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD + + + L G +HG +K+ +V S L+ +Y++C A
Sbjct: 472 LKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMAL 531
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF S+ ++V W+++I+ YS+ ++ F + QG D V I SVL A + +A
Sbjct: 532 KVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTA 591
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G +HGY ++ G + +AL+DMY KCG+ +F+ M +++IT+N +I
Sbjct: 592 SLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIY 651
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G HG A F ++ + G +PD+ TF +L+ AC H G V +G+ IF M ++YGI+
Sbjct: 652 GYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIE 711
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY MV LLG AG LEEAYSFI ++P D ++ LLS + N +L + A +
Sbjct: 712 PNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEK 771
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
L +P +G+ V L N Y E G ++ KL + + GL K+ G SW+ S
Sbjct: 772 LLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVS 823
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 200/397 (50%), Gaps = 3/397 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K++H + + SL D F T L+ +Y + + R+ + + +V LWN +I +
Sbjct: 190 KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGG 249
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ + L+ +K + ++ ACS++ + R +H + GL D
Sbjct: 250 SGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYV 309
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L++ YSK ++ EA VF V D L + N+M++ +A + +L LF +M +
Sbjct: 310 CTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSV 369
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD +TL +IS L + G+ +H K S + S L+++Y++C C AY
Sbjct: 370 LPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYF--RKLNMQGKKADPVLIASVLAAAAKS 319
VF S+ D+V W +LI+G + G + +AL F K + K D ++ SV A A
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G +HG +I+ G L+V V S+L+D+YSKCG + ++VF +MS N++ +NS+I
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ + + F ++ +G+ PD + +++L A
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVA 586
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/442 (26%), Positives = 200/442 (45%), Gaps = 25/442 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ-- 66
+L+ + +LS K +H V DPF AT LV +Y L A +FD Q
Sbjct: 66 LLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQ 125
Query: 67 -----RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA-CSE-NSD 119
R V +WNS+I Y RF + F+ +L ++PD F+ + + C E N
Sbjct: 126 SGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFR 185
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMIS 178
+ +HG + + L DS +AL+ Y K L +A +VF + D ++VL N MI
Sbjct: 186 REEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIV 245
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
GF G + SL L+ + G + + G+ IH +K +
Sbjct: 246 GFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHN 305
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRKL 297
YV + L+SMY++C + A VF+ + L W+A++ Y++ DYG AL F +
Sbjct: 306 DPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAEN-DYGYSALDLFGFM 364
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ D +++V++ + G +H + + + + + SAL+ +YSKCG
Sbjct: 365 RQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCD 424
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII--EKGLNPDESTFSALLC 415
VF++M E++++ + S+I GL +G +A + F D+ + L PD +++
Sbjct: 425 PDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTN 484
Query: 416 ACC-----------HGGLVNDG 426
AC HG ++ G
Sbjct: 485 ACAGLEALRFGLQVHGSMIKTG 506
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 184/389 (47%), Gaps = 12/389 (3%)
Query: 105 FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG 164
FT+ + +ACS ++L + +HG +V G D +++LV Y K +D A++VFDG
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDG 120
Query: 165 -------VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
VS D+ + NSMI G+ + + + F ML G PD ++L ++S + +
Sbjct: 121 WSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCK 180
Query: 218 PSLL--SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF-HPDLVTW 274
G+ IHGF L++S D+ ++ + L+ MY + A+ VF + ++V W
Sbjct: 181 EGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ +I G+ G +L + K L A ++S N G IH V++
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G V ++L+ MYSKCG +G VF + ++ + +N+++ + + Y A +
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDL 360
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F + +K + PD T S ++ C GL N G+ + + + IQ+ + ++ L
Sbjct: 361 FGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYS 419
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
G +AY S+ + D G+L+S
Sbjct: 420 KCGCDPDAYLVFKSMEEK-DMVAWGSLIS 447
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 44/109 (40%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S SL + K LH + + D L+ +Y A +F K +S
Sbjct: 583 VLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKS 642
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+ WN +I Y A SLF + + PD+ T+ + AC+ +
Sbjct: 643 LITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHS 691
>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130-like [Brachypodium distachyon]
Length = 707
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 168/554 (30%), Positives = 272/554 (49%), Gaps = 15/554 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S + ++ +LH + K D L+ +YA L A +F P+R+
Sbjct: 10 MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGMPERN 69
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNL--LRT--QLKPDNFTYACITRACSENSDLPGLR 124
V W +++ + R DA+ + L +R+ + P+ FT + +AC D+
Sbjct: 70 VVSWTALMVGFL---RHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGV 126
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
++HG + +G + +++LV YSK I +A +VFDG +LV N+MISG+AH G
Sbjct: 127 WIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186
Query: 185 FWDKSLQLFDWMLRLGK-----TPDEYTLVGLISGLWEPSLLSVGQGIHGFCL--KSSFD 237
SL +F M + + PDE+T L+ G +H + S
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246
Query: 238 SYDYVSSVLVSMYARCNCM-NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
S ++ L+ MY +C C+ A VFN L + + W+ +I G++Q+G +A+ F +
Sbjct: 247 SNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAMELFGR 306
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
G +AD +++SV+ A A V G +H Y ++ L V V+++L+DMY KCG
Sbjct: 307 FWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHKCGL 366
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ F + RN++++ ++I GLG HG +A F ++ +G+ PDE + ALL A
Sbjct: 367 TDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLALLSA 426
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C H GLV + R F+ + + ++ + EHY MV LLG AG L EA + ++P
Sbjct: 427 CSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMAPTVG 486
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
V LLS C ++ N + L D VMLSN +AE G W + ++R +
Sbjct: 487 VWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVRGAMR 546
Query: 537 DNGLRKEAGVSWVS 550
GLRK+ G SWV
Sbjct: 547 RRGLRKQGGCSWVE 560
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+IA +L A+A S+ + GA +HG +++ GF M+ + L+DMY+KCG L + +VF M
Sbjct: 6 MIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM 65
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVND 425
ERN++++ ++++G HG + + + P+E T SA L AC G+V D
Sbjct: 66 PERNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKAC---GVVGD 121
>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/537 (29%), Positives = 280/537 (52%), Gaps = 37/537 (6%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
LP A +F+ + ++ +WN+++R +A + A ++ ++ P+++++ + ++
Sbjct: 14 LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73
Query: 114 CSENSDLPGLRFVHGGAIVSGLG-------------------------------RDSITS 142
C+++ R +H + G G RD ++
Sbjct: 74 CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+T Y+ A KVFD +++ D+V N+MI+G+ G ++++L+LF M+R
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTNVR 193
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS----SFDSYDYVSSVLVSMYARCNCMNS 258
PDE TLV ++S + + +G+ +H + F S + + L+ +Y++C + +
Sbjct: 194 PDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVET 253
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ +F L D+V+W+ LI GY+ Y +AL F+++ G+ + V + SVL A A
Sbjct: 254 AFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACAH 313
Query: 319 SANVWPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ G IH Y+ + G + ++L+DMY+KCG + QVF +M R++ ++N
Sbjct: 314 LGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSWN 373
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I G +HG AF+ F + + PD+ TF LL AC H GL++ GR+IF MT++
Sbjct: 374 AMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQD 433
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y + K EHY M+ LLG +G +EA I ++P D + +LL C +GN +LAE
Sbjct: 434 YNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAES 493
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
A +L + +P V+LSN YA GRW+DV ++R + G++K G S + S
Sbjct: 494 FAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDS 550
>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 848
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 176/536 (32%), Positives = 278/536 (51%), Gaps = 3/536 (0%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ Q+L +++H V K D F A L+ +Y+ + AR LFD P R + WN
Sbjct: 183 KACQTLVDGRKIHCWVFKLGFQWDVFVAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWN 242
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I A + + + D+ T A I C++ D+ +H I
Sbjct: 243 AMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKH 302
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL + S+AL+ Y+K + +A KVF + D+V NS+I+ + + F
Sbjct: 303 GLEFELFVSNALINMYAKFGNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFF 362
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYAR 252
M G PD TLV L S + + +HGF ++ + V + ++ MYA+
Sbjct: 363 FKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAK 422
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN-MQGKKADPVLIAS 311
++SA+ VFN + D+V+W+ LI+GY+Q G +A+ +R + + K + S
Sbjct: 423 LGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVS 482
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
+LAA A + G IHG++I+ L V V + L+D+Y KCG L + +F + +
Sbjct: 483 ILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRES 542
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +N++I G+HG +A + FR++ ++G+ PD TF +LL AC H GLV++G+ F
Sbjct: 543 SVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLVDEGKWFFH 602
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M +EYGI+ +HY MV LLG AG LE AY FI +P D ++ GALL C I+GN
Sbjct: 603 LM-QEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLGACRIHGNI 661
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+L + + +LFE D Y V+LSN YA G+W+ V K+R + GL+K G S
Sbjct: 662 ELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWS 717
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 242/482 (50%), Gaps = 20/482 (4%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K LHAL+ + ++ F + +LV LYA + +R FD+ ++ V+ WNS+I AY
Sbjct: 92 AKRLHALLVVSGKIQSNFISIRLVNLYASLGDVSLSRGTFDQIQRKDVYTWNSMISAYVR 151
Query: 82 AHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
F +A F LL T+ + D +T+ + +AC L R +H G D
Sbjct: 152 NGHFREAIDCFYQLLLVTKFQADFYTFPPVLKACQT---LVDGRKIHCWVFKLGFQWDVF 208
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+++L+ YS+ + A +FD + D+ N+MISG G ++L + D M G
Sbjct: 209 VAASLIHMYSRFGFVGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 268
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D T+ ++ + +S IH + +K + +VS+ L++MYA+ + A
Sbjct: 269 INMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFELFVSNALINMYAKFGNLGDAQ 328
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF +F D+V+W+++I Y Q D A +F K+ + G + D + + S+ + AA+S
Sbjct: 329 KVFQQMFLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSR 388
Query: 321 NVWPGAVIHGYVIQHGFEL-SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ +HG++++ G+ + +V++ +A++DMY+K G + +VF + ++++++N++I
Sbjct: 389 DYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLI 448
Query: 380 LGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
G +G +A E +R + E + + ++ T+ ++L A H G + G I +G
Sbjct: 449 SGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAAYAHVGALQQGMRI-------HG 501
Query: 439 IQAKTEHYI------YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
KT ++ ++ L G G L +A + +P+ A++SC I+G+ +
Sbjct: 502 HLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCLFYQVPRE-SSVPWNAIISCHGIHGHGE 560
Query: 493 LA 494
A
Sbjct: 561 KA 562
>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
Length = 615
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/443 (33%), Positives = 250/443 (56%), Gaps = 1/443 (0%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y AC E L R VH I + + LVT Y + +D+A V D +
Sbjct: 45 YEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMP 104
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ +V +MISG++ ++L LF MLR G P+EYTL +++ P + G+
Sbjct: 105 ERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H +K++F+S+ +V S L+ MYA+ + A VF++L D+V+ +A+I+GY+Q+G
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+AL FR+L +G + + V +++ A + A++ G +H +++ V + ++
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+DMYSKCG L +VF+ M ER+++++N++++G G HG ++ F+D + K + PD
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKD-LHKEVKPD 343
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
T A+L C HGGLV++G +IF + +E T HY ++ LLG +G LE+A + I
Sbjct: 344 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 403
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
++P P++ G+LL C ++ N + E+VA +L E +P V+LSN YA G W
Sbjct: 404 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 463
Query: 527 DVMKLRDDIVDNGLRKEAGVSWV 549
DV K+R +++ + KE G SW+
Sbjct: 464 DVFKVRKLMLEKTVTKEPGQSWI 486
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 174/355 (49%), Gaps = 8/355 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L +++HA + A F T+LV +Y L AR + D+ P+RSV W ++I
Sbjct: 56 RALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGALDDARNVLDRMPERSVVSWTTMI 115
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ R +A LF +LR P+ +T A + +CS + + VH + +
Sbjct: 116 SGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFE 175
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S+L+ Y+K I EA +VFD + + D+V C ++ISG+A G +++L LF +
Sbjct: 176 SHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGLDEEALDLFRQL 235
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G + T L++ L + L G+ +H L+ + + + L+ MY++C +
Sbjct: 236 YSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNSLIDMYSKCGKL 295
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ VF+++ +V+W+A++ GY + G + + F+ L+ + K D V + +VL+
Sbjct: 296 LYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHKE-VKPDSVTLLAVLSGC 354
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSA----LVDMYSKCGYLGLGIQVFETM 367
+ V G I V++ E S ++ + ++D+ + G L + + E M
Sbjct: 355 SHGGLVDEGLDIFDTVVK---EQSALLHTGHYGCIIDLLGRSGRLEKALNLIENM 406
>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 866
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/532 (30%), Positives = 279/532 (52%), Gaps = 3/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+R +E+H V + D L+ +Y + SAR+LFD+ P+R + WN++I
Sbjct: 212 LARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y ++ LF + + PD T + AC D R +H I +G D
Sbjct: 272 YFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVD 331
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L Y EA K+F + D+V +MISG+ + +K++ + M +
Sbjct: 332 ISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAIDTYRMMDQ 391
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
PDE T+ ++S L G +H +K+ SY V++ L++MY++C C++
Sbjct: 392 DSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDK 451
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+++ ++++W+++I G +AL +FR++ M + + + + + LAA A+
Sbjct: 452 ALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQMKMT-LQPNAITLTAALAACAR 510
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH +V++ G L + +AL+DMY +CG + + F + ++++ ++N +
Sbjct: 511 IGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNIAWNQFNS-QKKDVSSWNIL 569
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G G E F +++ + PDE TF +LLC C +V G F++M EEYG
Sbjct: 570 LTGYSERGQGSVVVELFDRMVKARVRPDEITFISLLCGCGKSQMVRQGLMYFSKM-EEYG 628
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
+ +HY +V LLG AG L+EA+ FI +P DPAV GALL+ C I+ N DL E+ A
Sbjct: 629 VTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHNIDLGELSA 688
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
++FE D Y ++L N YA+ G+W +V K+R + +NGL +AG SWV
Sbjct: 689 QRIFELDKGSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/377 (30%), Positives = 190/377 (50%), Gaps = 2/377 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITR 112
L A +F K +R++F WN ++ YA F++A L+ +L +KPD +T+ C+ R
Sbjct: 145 LVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVGGVKPDVYTFPCVLR 204
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
C DL R VH + G D +AL+T Y K + A +FD + D++
Sbjct: 205 TCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIIS 264
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+MISG+ G + L+LF M L PD TL +IS +G+ IH + +
Sbjct: 265 WNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVI 324
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ F V + L MY A +F+ + D+V+W+ +I+GY KA+
Sbjct: 325 TTGFAVDISVCNSLTQMYLYAGSWREAEKLFSRMDCKDIVSWTTMISGYEYNFLPEKAID 384
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
+R ++ K D + +A+VL+A A ++ G +H I+ V+V++ L++MYS
Sbjct: 385 TYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYS 444
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KC + + +F + +N+I++ S+I GL L+ ++A FFR ++ L P+ T +A
Sbjct: 445 KCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFFRQ-MKMTLQPNAITLTA 503
Query: 413 LLCACCHGGLVNDGREI 429
L AC G + G+EI
Sbjct: 504 ALAACARIGALMCGKEI 520
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 126/254 (49%), Gaps = 1/254 (0%)
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
+ G G +++++L + M L DE V L+ G ++ L S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMN 125
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL-YYFR 295
+ + ++M+ R + A++VF + +L +W+ L+ GY++QG + +A+ Y R
Sbjct: 126 SLSVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAICLYHR 185
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
L + G K D VL ++ G +H +V+++G+EL + V +AL+ MY KCG
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ +F+ M R+II++N++I G +G ++ + F + ++PD T ++++
Sbjct: 246 DVKSARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVIS 305
Query: 416 ACCHGGLVNDGREI 429
AC G GR+I
Sbjct: 306 ACELLGDRRLGRDI 319
>gi|116310930|emb|CAH67868.1| B0403H10-OSIGBa0105A11.20 [Oryza sativa Indica Group]
Length = 804
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 288/537 (53%), Gaps = 14/537 (2%)
Query: 24 ELHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+L+ L+ K + D F + + +++ + SAR +FD+ +++ +WN++I Y
Sbjct: 233 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 292
Query: 82 AHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD-- 138
+F++A LF +L ++ P D T+ A S++ D+ + +HG ++ G+ R
Sbjct: 293 NGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHG-YLIKGMHRTLP 351
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
I +ALV YS+ + A +FD + + D+V N+M++ F F + L L M +
Sbjct: 352 VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQK 411
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G D TL ++S L +G+ HG+ ++ + + + S L+ MYA+ +
Sbjct: 412 SGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEG-EGLESYLIDMYAKSGRVEM 470
Query: 259 AYHVFNSLFHP--DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+S + D VTW+A+I GY+Q G KA+ FR + G + V +ASVL A
Sbjct: 471 AQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 530
Query: 317 AK-SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
V+ G IH + ++ + +V V +AL+DMYSKCG + VF M+ ++ +TY
Sbjct: 531 DPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTY 590
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++I GLG HGF +A F + EKGL PD TF + + AC + GLV++G ++ M +
Sbjct: 591 TTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSM-D 649
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD-PAVSGALLSCCHIYGNSDLA 494
+GI A +H+ + LL AG +EEAY FI L + + A+ G+LL+ C G +LA
Sbjct: 650 SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELA 709
Query: 495 EIVAHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++V +L + + + G Y V+LS A + W+ LR ++ GL+KEAG SW+
Sbjct: 710 KLVTKKLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWI 766
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 211/417 (50%), Gaps = 16/417 (3%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARI-----LFDKTPQRSVFLWNSIIRAYA 80
H L SL L+ LYA + AR+ LFD P+R+V WN++ Y
Sbjct: 130 HMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYV 189
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS-GLG--R 137
R +A LF +L +P ++ I A +D P F G +V G+
Sbjct: 190 KTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAV--ADDPSWPFQLYGLLVKYGVEYIN 247
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D S+ + +S+ + A +VFD + + + N+MI+G+ G + +++ LF +L
Sbjct: 248 DLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKIL 307
Query: 198 RLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNC 255
+ P D T + ++ + +S+GQ +HG+ +K + + + LV MY+RC
Sbjct: 308 GSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGN 367
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ +A+ +F+ L D+VTW+ ++T + Q + L ++ G AD V + +VL+A
Sbjct: 368 VQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSA 427
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM--SERNII 373
++ + ++ G HGY+I+HG E + S L+DMY+K G + + +VF++ ++R+ +
Sbjct: 428 SSNTGDLQIGKQAHGYLIRHGIE-GEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEV 486
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH-GGLVNDGREI 429
T+N++I G G +A FR ++E GL P T +++L AC GG V G++I
Sbjct: 487 TWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQI 543
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 201/424 (47%), Gaps = 26/424 (6%)
Query: 58 RILFDKTPQRS-VFLWNSIIRAYA---LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
R+L + P+ L N+++ AYA L +L + R ++ D++TY+ A
Sbjct: 55 RLLLEALPRPPPTLLCNALLIAYADRALQEEALRLNALLNHAARPPVRSDHYTYSAALTA 114
Query: 114 CSENSDLPGLRFVHGGAI--VSGLGRDSITSSALVTAYS-----KLSLIDEAIKVFDGVS 166
C+ + L R VH + L ++ ++L+ Y+ + + +D ++FD +
Sbjct: 115 CARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMP 174
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
++V N++ + G ++L+LF ML G P + V + P+ ++
Sbjct: 175 KRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIF-----PAAVADDPS 229
Query: 227 ----IHGFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
++G +K + + +V S + M++ + SA VF+ + W+ +ITG
Sbjct: 230 WPFQLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITG 289
Query: 281 YSQQGDYGKALYYFRK-LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE- 338
Y Q G + +A+ F K L + D V S L AA++S +V G +HGY+I+
Sbjct: 290 YVQNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRT 349
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
L V++ +ALV MYS+CG + +F+ + E++I+T+N+++ + F + ++
Sbjct: 350 LPVILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEM 409
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ G D T +A+L A + G + G++ + +GI+ + Y++ + +G
Sbjct: 410 QKSGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLI-RHGIEGEGLES-YLIDMYAKSGR 467
Query: 459 LEEA 462
+E A
Sbjct: 468 VEMA 471
>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 997
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 169/547 (30%), Positives = 293/547 (53%), Gaps = 8/547 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
LVL + SL+ +++H + K L + L+ +Y + AR +F+ +
Sbjct: 326 ILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSE 385
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GL-- 123
R + WNS+I A + +A LF LLR LKPD++T + +A S LP GL
Sbjct: 386 RDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASS---LPEGLSL 442
Query: 124 -RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +H AI + DS S+AL+ AYS+ + EA +F G ++ DLV N+M+SG+
Sbjct: 443 SKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF-GRNNFDLVAWNAMMSGYTQ 501
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
K+L+LF M + G+ D++TL ++ ++ G+ +H + +KS +D +V
Sbjct: 502 SHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 561
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
SS ++ MY +C M++A F+S+ PD V W+ LI+G + G+ +AL+ F ++ + G
Sbjct: 562 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGV 621
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D IA++ A++ + G IH ++ V ++LVDMY+KCG +
Sbjct: 622 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTSDPFVGTSLVDMYAKCGSIDDAYC 681
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ + NI +N++++GL HG +A + F+ + G+ PD+ TF +L AC H GL
Sbjct: 682 LFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFKQMESLGIKPDKVTFIGVLSACSHSGL 741
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V++ + M +YGI+ + EHY + LG AG ++EA + I S+ ++ LL
Sbjct: 742 VSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRAGLVKEAENLIDSMSMEASASMYRTLL 801
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
+ C + G+++ + VA +L E +P + V+LSN YA +WD++ R + + ++K
Sbjct: 802 AACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKK 861
Query: 543 EAGVSWV 549
+ G SW+
Sbjct: 862 DPGFSWI 868
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 200/405 (49%), Gaps = 7/405 (1%)
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
D + + N I+ Y A +++ F +++ + L+ D T+ + L
Sbjct: 280 DASAVSEIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLA 339
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ VH A+ GL S++L+ Y KL I A VF+ +S+ DL+ NS+I+G A
Sbjct: 340 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIA 399
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE-PSLLSVGQGIHGFCLKSSFDSYD 240
+++ LF +LR G PD YT+ ++ P LS+ + IH +K++ +
Sbjct: 400 QSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADS 459
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+VS+ L+ Y+R CM A +F + DLV W+A+++GY+Q D K L F ++ Q
Sbjct: 460 FVSTALIDAYSRNRCMKEAEVLFGR-NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQ 518
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G+++D +A+VL + G +H Y I+ G++L + VSS ++DMY KCG +
Sbjct: 519 GERSDDFTLATVLKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 578
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
F+++ + + + ++I G +G +A F + G+ PDE T + L A
Sbjct: 579 QFAFDSIPVPDDVAWTTLISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCL 638
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAY 463
+ GR+I + + ++ ++ +V + G++++AY
Sbjct: 639 TALEQGRQIHANALK---LNCTSDPFVGTSLVDMYAKCGSIDDAY 680
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 176/387 (45%), Gaps = 41/387 (10%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA-----LAHRFNDAKSL 91
+ F L+ +Y+ L AR +FDK P+R + WNSI+ AYA + +A L
Sbjct: 80 ERFLVNNLISMYSKCGSLTYARRVFDKMPERDLVSWNSILAAYAQSSEGVVENVKEAFLL 139
Query: 92 FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
F+ L + + T + + + C + + HG A GL D + ALV Y K
Sbjct: 140 FRILRQDVVYTSRMTLSPMLKLCLHSGYVCASESFHGYACKIGLDGDDFVAGALVNIYLK 199
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT--LV 209
+ E +F+ + D+VL N M+ + GF ++++ L G P+E T L+
Sbjct: 200 FGKVKEGRVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHTSGLHPNEITLRLL 259
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
ISG + S GQ SF++ + S+V
Sbjct: 260 SRISG--DDS--EAGQ-------VKSFENGNDASAV-----------------------S 285
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
++++ + +++GY G Y L F + + D V VLA A + ++ G +H
Sbjct: 286 EIISRNKILSGYLHAGQYSALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVH 345
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
++ G +L + VS++L++MY K +GL VF MSER++I++NSVI G+
Sbjct: 346 CMALKLGLDLMLTVSNSLINMYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEV 405
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCA 416
+A F ++ GL PD T +++L A
Sbjct: 406 EAVCLFMQLLRCGLKPDHYTMTSVLKA 432
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 210/488 (43%), Gaps = 50/488 (10%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++ H K L D F A LV +Y + R+LF++ P R V LWN +++AY
Sbjct: 171 SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLE 230
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+A L + L P+ T ++R ++S+ ++ G S +
Sbjct: 231 MGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENGNDASAVS----- 285
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++ N ++SG+ H G + L+ F M+
Sbjct: 286 ---------------------------EIISRNKILSGYLHAGQYSALLKCFMDMVESDL 318
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D+ T + +++ L++GQ +H LK D VS+ L++MY + + A
Sbjct: 319 ECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKIGLART 378
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK-SA 320
VFN++ DL++W+++I G +Q +A+ F +L G K D + SVL AA+
Sbjct: 379 VFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYTMTSVLKAASSLPE 438
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN---IITYNS 377
+ IH + I+ VS+AL+D YS+ ++ E + RN ++ +N+
Sbjct: 439 GLSLSKQIHVHAIKTNNVADSFVSTALIDAYSR----NRCMKEAEVLFGRNNFDLVAWNA 494
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
++ G ++ E F + ++G D+ T + +L C +N G+++ Y
Sbjct: 495 MMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQGKQVHA-----Y 549
Query: 438 GIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
I++ + ++ ++ + G++ A S+P P D A + L+S C G +
Sbjct: 550 AIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWT-TLISGCIENGEEER 608
Query: 494 AEIVAHQL 501
A V Q+
Sbjct: 609 ALHVFSQM 616
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 95/209 (45%), Gaps = 5/209 (2%)
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
G + S L +G+ H L + ++ + L+SMY++C + A VF+ +
Sbjct: 51 GFLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPER 110
Query: 270 DLVTWSALITGYSQQGD-----YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
DLV+W++++ Y+Q + +A FR L + ++ +L S V
Sbjct: 111 DLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA 170
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
HGY + G + V+ ALV++Y K G + G +FE M R+++ +N ++
Sbjct: 171 SESFHGYACKIGLDGDDFVAGALVNIYLKFGKVKEGRVLFEEMPYRDVVLWNLMLKAYLE 230
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
GF +A + GL+P+E T L
Sbjct: 231 MGFKEEAIDLSSAFHTSGLHPNEITLRLL 259
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A ++++ G H ++ + + L+ MYSKCG L +VF+ M ER++
Sbjct: 53 LRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKMPERDL 112
Query: 373 ITYNSVILGL-----GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
+++NS++ G+ +AF FR + + + T S +L C H G V
Sbjct: 113 VSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 168
>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 808
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 277/547 (50%), Gaps = 6/547 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ + L + +H A+A L D F +T LV +YA A +F + P R
Sbjct: 134 FVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPAR 193
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V WN+++ YAL +++D + L++ P+ T + +++ L R VH
Sbjct: 194 DVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAVH 252
Query: 128 GGAIVSGLGRDS----ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
++ + D + +AL+ Y+K + A +VF+ ++ + V ++++ GF C
Sbjct: 253 AYSVRACSLHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLC 312
Query: 184 GFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++ LF ML G ++ + S L +G+ +H KS +
Sbjct: 313 GRMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTA 372
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+SMYA+ ++ A +F+ + D V++SAL++GY Q G +A FRK+
Sbjct: 373 GNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNV 432
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D + S++ A + A + G HG VI G + +AL+DMY+KCG + L Q
Sbjct: 433 QPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRIDLSRQ 492
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ M R+I+++N++I G G+HG +A F D+ + PD+ TF L+ AC H GL
Sbjct: 493 IFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISACSHSGL 552
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V +G+ F M +YGI + EHYI MV LL G L+EAY FI +P D V GALL
Sbjct: 553 VTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRVWGALL 612
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C ++ N DL + V+ + + P V+LSN ++ GR+D+ ++R + G +K
Sbjct: 613 GACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKEQGFKK 672
Query: 543 EAGVSWV 549
G SW+
Sbjct: 673 SPGCSWI 679
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 190/376 (50%), Gaps = 6/376 (1%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR LFD+ P + +N++IRAY+L + R +P+N+T+ + +ACS
Sbjct: 82 ARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFVLKACSA 141
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
DL R VH A +GL D S+ALV Y+K + A VF + D+V N+M
Sbjct: 142 LLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDVVAWNAM 201
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK--S 234
++G+A G + ++ +++ P+ TLV L+ L + LS G+ +H + ++ S
Sbjct: 202 LAGYALHGKYSDTIACL-LLMQDDHAPNASTLVALLPLLAQHGALSQGRAVHAYSVRACS 260
Query: 235 SFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
D D V + L+ MYA+C + A VF ++ + VTWSAL+ G+ G +A
Sbjct: 261 LHDHKDGVLVGTALLDMYAKCGHLVYASRVFEAMAVRNEVTWSALVGGFVLCGRMLEAFS 320
Query: 293 YFRKLNMQGKK-ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F+ + QG P +AS L A A +++ G +H + + G + ++L+ MY
Sbjct: 321 LFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLHTDLTAGNSLLSMY 380
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+K G + +F+ M ++ ++Y++++ G +G +AF FR + + PD +T
Sbjct: 381 AKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKMQACNVQPDVATMV 440
Query: 412 ALLCACCHGGLVNDGR 427
+L+ AC H + G+
Sbjct: 441 SLIPACSHLAALQHGK 456
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C ++ A H+F+ + P + ++ALI YS +G Y + + + V
Sbjct: 76 CGDLSLARHLFDQIPAPGIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPFV 135
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A + ++ +H + + G + VS+ALVD+Y+KC VF M R++
Sbjct: 136 LKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATVFRRMPARDV 195
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+ +N+++ G LHG Y +++ P+ ST ALL G ++ GR +
Sbjct: 196 VAWNAMLAGYALHG-KYSDTIACLLLMQDDHAPNASTLVALLPLLAQHGALSQGRAV--- 251
Query: 433 MTEEYGIQAKTEH 445
Y ++A + H
Sbjct: 252 --HAYSVRACSLH 262
>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
Length = 690
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 274/549 (49%), Gaps = 13/549 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S SL +LHA + K D L+ +YA L A +FD P+R+
Sbjct: 10 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 69
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +++ + + LF + + P+ FT + +AC + G++ +HG
Sbjct: 70 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTR-AGVQ-IHG 127
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G + +++LV YSK +A +VFD + +L NSMISG+AH G
Sbjct: 128 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 187
Query: 189 SLQLFDWMLRL-GKTPDEYTLVGLI---SGL---WEPSLLSVGQGIHGFCLKSSFDSYDY 241
SL +F M R + PDE+T L+ SGL E + + + G S S
Sbjct: 188 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV----SPASNAI 243
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
++ L+ +Y +C+ + A VF+ L + + W+ +I G++Q+G +A+ FR+ G
Sbjct: 244 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 303
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+AD +++SV+A A A V G +H Y + L V V+++LVDMY KCG G
Sbjct: 304 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 363
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ F M RN++++ ++I G+G HG +A + F ++ +G+ DE + ALL AC H G
Sbjct: 364 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 423
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV++ R F+R+ ++ ++ K EHY MV LLG AG L EA I S+P V L
Sbjct: 424 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 483
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
LS C ++ + + V L D VMLSN AE G W + +R + GLR
Sbjct: 484 LSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLR 543
Query: 542 KEAGVSWVS 550
K+ G SW
Sbjct: 544 KQGGCSWTE 552
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+IA +L A+A+ +++ G +H +++ GF M+++ L+DMY+KCG L + +VF+ M
Sbjct: 6 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 65
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ERN++++ ++++G HG + F ++ G +P+E T SA L AC GG G
Sbjct: 66 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC--GGGTRAGV 123
Query: 428 EI 429
+I
Sbjct: 124 QI 125
>gi|326490736|dbj|BAJ90035.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511421|dbj|BAJ87724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 285/523 (54%), Gaps = 11/523 (2%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+ D F + + +++ + + SAR++FD+ ++++ +WN++I Y +F+ A LF
Sbjct: 241 VNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYVQNGQFSQAMDLFIQ 300
Query: 95 LLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD--SITSSALVTAYSK 151
+L ++ P D T+ A S++ D+ + +HG ++ G+ I +ALV YS+
Sbjct: 301 ILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHG-YLMKGMHSTLPVILGNALVVMYSR 359
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
+ A ++FD + + D+V N+MI+ F F + L L M + G PD TL +
Sbjct: 360 CGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQKSGFIPDTVTLTAV 419
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP-D 270
+S L +G+ HG+ ++ + + + S L+ MY++ ++ A VF+ + D
Sbjct: 420 LSAASNTGDLQIGKQSHGYLIRHGIEG-EGLESYLIDMYSKSGRIDMAQRVFDGYGNDRD 478
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK-SANVWPGAVIH 329
VTW+A+I GY+Q G +A+ FR + G + V +ASVL A V G IH
Sbjct: 479 EVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVTLASVLPACDPVGGGVCAGKQIH 538
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
+ ++H + +V V +ALVDMYSKCG + VF M+E++ +TY ++I GLG HGF
Sbjct: 539 SFALRHSLDTNVFVGTALVDMYSKCGEISAAENVFGGMTEKSTVTYTTMISGLGQHGFGE 598
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+A F + +KGL PD TF A + AC + GLV++G ++ M E +G+ A +H+ +
Sbjct: 599 RALSLFYSMRDKGLKPDAVTFLAAISACNYSGLVDEGLSLYRSM-ETFGLAATPQHHCCI 657
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVD-PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
V LL AG ++EAY F+ SL + + A+ G+LL+ C G +LA ++ + +
Sbjct: 658 VDLLAKAGRVDEAYDFVESLGEDGNFIAIWGSLLASCKAQGKMELAAWATEKVLNIEKQY 717
Query: 509 G--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
G Y V+LS +A +G W LR ++ GLRKEAG +W+
Sbjct: 718 GHAGYNVLLSQLFAAEGNWSSADSLRKEMRLRGLRKEAGSTWI 760
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 109/383 (28%), Positives = 198/383 (51%), Gaps = 14/383 (3%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
R LFD P+++V WN++ Y R ++A +F +L ++P ++ + A
Sbjct: 162 RRLFDAMPKKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAGSG 221
Query: 118 SD-----LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
L GL HG V+ D S+ + +S++S + A VFD ++ +
Sbjct: 222 DPSWPFLLYGLLIKHGVEYVN----DLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEV 277
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N+MI+G+ G + +++ LF +L + P D T + ++ + + +GQ +HG+
Sbjct: 278 WNTMITGYVQNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYL 337
Query: 232 LKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
+K + + + LV MY+RC + +A+ +F+ L D+V+W+ +IT + Q +
Sbjct: 338 MKGMHSTLPVILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEG 397
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L ++ G D V + +VL+AA+ + ++ G HGY+I+HG E + S L+DM
Sbjct: 398 LLLVYQMQKSGFIPDTVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIE-GEGLESYLIDM 456
Query: 351 YSKCGYLGLGIQVFETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
YSK G + + +VF+ ++R+ +T+N++I G G QA FR +IE G+ P T
Sbjct: 457 YSKSGRIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLQFRAMIEAGVEPTSVT 516
Query: 410 FSALLCACCH-GGLVNDGREIFT 431
+++L AC GG V G++I +
Sbjct: 517 LASVLPACDPVGGGVCAGKQIHS 539
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 191/388 (49%), Gaps = 20/388 (5%)
Query: 58 RILFDKTPQRS-VFLWNSIIRAY---ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
R+L D P+ L N ++ AY AL +L + R + D++TY+C A
Sbjct: 50 RLLLDALPRPPPTLLCNVLLIAYVAGALPDHALRLYALLNHAARPAPRSDHYTYSCALTA 109
Query: 114 CSENSDLPGLRFVHGGAI--VSGLGRDSITSSALVTAYSKLSL-----IDEAIKVFDGVS 166
C+ + L R VH + L ++ ++L+ Y+ + +D ++FD +
Sbjct: 110 CARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLYASCARHRRGGVDVVRRLFDAMP 169
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI--SGLWEPSLLSVG 224
++V N++ + G D++L++F ML G P + V + +G +PS +
Sbjct: 170 KKNVVSWNTLFGWYVKTGRPDEALEMFARMLEDGVRPTPVSFVNVFPAAGSGDPSWPFL- 228
Query: 225 QGIHGFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
++G +K + + +V S + M++ + + SA VF+ ++ W+ +ITGY
Sbjct: 229 --LYGLLIKHGVEYVNDLFVVSSAIGMFSEISDVQSARMVFDRAGKKNIEVWNTMITGYV 286
Query: 283 QQGDYGKALYYF-RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE-LS 340
Q G + +A+ F + L + +D V S + AA++S +V G +HGY+++ L
Sbjct: 287 QNGQFSQAMDLFIQILGSKEVPSDVVTFLSAVTAASQSQDVRLGQQLHGYLMKGMHSTLP 346
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V++ +ALV MYS+CG + ++F+ + E++I+++N++I + F + + +
Sbjct: 347 VILGNALVVMYSRCGNVQTAFELFDRLPEKDIVSWNTMITAFVQNDFDLEGLLLVYQMQK 406
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGRE 428
G PD T +A+L A + G + G++
Sbjct: 407 SGFIPDTVTLTAVLSAASNTGDLQIGKQ 434
>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
Length = 672
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 276/526 (52%), Gaps = 36/526 (6%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
LP A +F+ P+ + +WN + R +AL+ A L+ ++ L P+ FT+ + ++
Sbjct: 25 LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84
Query: 114 CSENSDLPGLRFVHGGAIVSGLG-------------------------------RDSITS 142
C+++ + +HG + G RD ++
Sbjct: 85 CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVVSY 144
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+T Y+ I+ A K+FD + D+V N+MISG+A G + K+L+LF M++
Sbjct: 145 TALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTNVK 204
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PDE T+ ++S + + +G+ +H + F S + + L+ +Y++C + +A +
Sbjct: 205 PDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETACEL 264
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
L + D+++W+ LI GY+ Y +AL F+++ G+ + V + S+L A A +
Sbjct: 265 LEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAI 324
Query: 323 WPGAVIHGYVIQHGFELSVMVSSAL----VDMYSKCGYLGLGIQVFETMS-ERNIITYNS 377
G IH Y+ + + V +S+L +DMY+KCG + QV ++ + R++ T+N+
Sbjct: 325 DIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNA 384
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G +HG AF+ F + + G+ PD+ TF LL AC H G+++ GR IF M ++Y
Sbjct: 385 MIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMRQDY 444
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I K EHY M+ LLG +G +EA I ++P D + +LL C I+GN +L E
Sbjct: 445 NITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGESF 504
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
A +L + +P V+LSN YA G+W++V K+R + D G++K+
Sbjct: 505 AKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKK 550
>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
Length = 653
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/516 (29%), Positives = 272/516 (52%), Gaps = 2/516 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + L+ +Y L A +FD+ +R+V W +++ + ++ LF +
Sbjct: 6 DLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLFSKMG 65
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ +KP++FT++ +AC + L R +H + +G ++ ++++ YSK I+
Sbjct: 66 LSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKCGRIN 125
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
EA +F+ + +L+ N+MI+G+ GF +K+L LF M +G DE+T +
Sbjct: 126 EAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACS 185
Query: 217 EPSLLSVGQGIHGFCLKSSF--DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ + G IH F + F V+ L+ +Y +C + A VF+ + +++W
Sbjct: 186 DLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHIEEKHVISW 245
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ALI GY+Q+G+ +++ FR+L + D +++S++ A A V G +H + I+
Sbjct: 246 TALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFAIK 305
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ + V ++++DMY KCG + ++F M RN+I++ +I G G HG +A
Sbjct: 306 VPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAIRL 365
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F ++ PD+ T+ A+L C H GLV G+E F+R+ +GI+A+ EHY MV LLG
Sbjct: 366 FDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDLLG 425
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG L+EA + + S+P + + LLS C ++G+ +L + V L D VM
Sbjct: 426 RAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRLDSENPVNYVM 485
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+SN YA+ G W + ++R+ + L+KEAG SWV
Sbjct: 486 MSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVE 521
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/304 (29%), Positives = 155/304 (50%), Gaps = 14/304 (4%)
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G G D + S+ L+ Y K + A VFD + ++V +++ G G +SL LF
Sbjct: 2 GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61
Query: 194 DWMLRLGKTPDEYTL------VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
M G P+++T GL++G L +G+ IH C+K+ FD + V + ++
Sbjct: 62 SKMGLSGVKPNDFTFSTNLKACGLLNG------LDIGRQIHDICVKTGFDMVNVVGNSII 115
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY++C +N A +F + +L++W+A+I GY+ G KAL F+K+ G D
Sbjct: 116 DMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEF 175
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV--MVSSALVDMYSKCGYLGLGIQVFE 365
S L A + + G IH ++I GF SV V+ AL+D+Y KCG L + +VF
Sbjct: 176 TFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFS 235
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ E+++I++ ++ILG G ++ E FR + E + D S+++ LV
Sbjct: 236 HIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQ 295
Query: 426 GREI 429
G+++
Sbjct: 296 GKQM 299
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 166/368 (45%), Gaps = 4/368 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H + K ++ +Y+ + A +F+ P R++ WN++I Y +A
Sbjct: 93 RQIHDICVKTGFDMVNVVGNSIIDMYSKCGRINEAACMFEVMPVRNLISWNAMIAGYTVA 152
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--GRDSI 140
A LF+ + D FT+ +ACS+ + +H I G ++
Sbjct: 153 GFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTA 212
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+ AL+ Y K + A +VF + + ++ ++I G+A G +S++LF +
Sbjct: 213 VAGALIDLYVKCGKLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESS 272
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D + L ++ + +L+ G+ +H F +K V + ++ MY +C +N A
Sbjct: 273 IQVDGFILSSMMGVFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKCGMINEAE 332
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F+ + ++++W+ +ITGY + G +A+ F ++ + + D V +VL + S
Sbjct: 333 RLFSEMPARNVISWTVMITGYGKHGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSG 392
Query: 321 NVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSV 378
V G + HG + V + +VD+ + G L + ++M E N+ + ++
Sbjct: 393 LVEKGQEYFSRLCSYHGIKARVEHYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTL 452
Query: 379 ILGLGLHG 386
+ +HG
Sbjct: 453 LSACRVHG 460
>gi|115460348|ref|NP_001053774.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|38344148|emb|CAE01824.2| OSJNBa0041A02.15 [Oryza sativa Japonica Group]
gi|113565345|dbj|BAF15688.1| Os04g0602600 [Oryza sativa Japonica Group]
gi|125549608|gb|EAY95430.1| hypothetical protein OsI_17272 [Oryza sativa Indica Group]
Length = 804
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 172/537 (32%), Positives = 288/537 (53%), Gaps = 14/537 (2%)
Query: 24 ELHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+L+ L+ K + D F + + +++ + SAR +FD+ +++ +WN++I Y
Sbjct: 233 QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQ 292
Query: 82 AHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD-- 138
+F++A LF +L ++ P D T+ A S++ D+ + +HG ++ G+ R
Sbjct: 293 NGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHG-YLIKGMHRTLP 351
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
I +ALV YS+ + A +FD + + D+V N+M++ F F + L L M +
Sbjct: 352 VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQK 411
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G D TL ++S L +G+ HG+ ++ + + + S L+ MYA+ +
Sbjct: 412 SGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLIRHGIEG-EGLESYLIDMYAKSGRVEM 470
Query: 259 AYHVFNSLFHP--DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+S + D VTW+A+I GY+Q G KA+ FR + G + V +ASVL A
Sbjct: 471 AQRVFDSFKNAKRDEVTWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPAC 530
Query: 317 AK-SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
V+ G IH + ++ + +V V +AL+DMYSKCG + VF M+ ++ +TY
Sbjct: 531 DPVGGGVYSGKQIHCFAVRRCLDTNVFVGTALIDMYSKCGEITTAENVFGGMTGKSTVTY 590
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++I GLG HGF +A F + EKGL PD TF + + AC + GLV++G ++ M +
Sbjct: 591 TTMISGLGQHGFGKKALALFNSMQEKGLKPDAVTFLSAISACNYSGLVDEGLALYRSM-D 649
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD-PAVSGALLSCCHIYGNSDLA 494
+GI A +H+ + LL AG +EEAY FI L + + A+ G+LL+ C G +LA
Sbjct: 650 SFGISATPQHHCCVADLLAKAGRVEEAYEFIEGLGEEGNFVAIWGSLLASCKAQGKQELA 709
Query: 495 EIVAHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++V +L + + + G Y V+LS A + W+ LR ++ GL+KEAG SW+
Sbjct: 710 KLVTKKLLDIEKQYGHAGYSVLLSQVLAAESNWNSADSLRKEMRARGLKKEAGSSWI 766
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/417 (28%), Positives = 211/417 (50%), Gaps = 16/417 (3%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARI-----LFDKTPQRSVFLWNSIIRAYA 80
H L SL L+ LYA + AR+ LFD P+R+V WN++ Y
Sbjct: 130 HMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMPKRNVVSWNTLFGWYV 189
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS-GLG--R 137
R +A LF +L +P ++ I A +D P F G +V G+
Sbjct: 190 KTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAV--ADDPSWPFQLYGLLVKYGVEYIN 247
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D S+ + +S+ + A +VFD + + + N+MI+G+ G + +++ LF +L
Sbjct: 248 DLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYVQNGQFSEAIDLFSKIL 307
Query: 198 RLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNC 255
+ P D T + ++ + +S+GQ +HG+ +K + + + LV MY+RC
Sbjct: 308 GSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLPVILGNALVVMYSRCGN 367
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ +A+ +F+ L D+VTW+ ++T + Q + L ++ G AD V + +VL+A
Sbjct: 368 VQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQKSGFAADSVTLTAVLSA 427
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM--SERNII 373
++ + ++ G HGY+I+HG E + S L+DMY+K G + + +VF++ ++R+ +
Sbjct: 428 SSNTGDLQIGKQAHGYLIRHGIE-GEGLESYLIDMYAKSGRVEMAQRVFDSFKNAKRDEV 486
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH-GGLVNDGREI 429
T+N++I G G +A FR ++E GL P T +++L AC GG V G++I
Sbjct: 487 TWNAMIAGYTQSGQPEKAILVFRAMLEAGLEPTSVTLASVLPACDPVGGGVYSGKQI 543
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 201/422 (47%), Gaps = 22/422 (5%)
Query: 58 RILFDKTPQRS-VFLWNSIIRAYALAHRFNDAKSLFKNL---LRTQLKPDNFTYACITRA 113
R+L + P+ L N+++ AYA +A L+ L R ++ D++TY+ A
Sbjct: 55 RLLLEALPRPPPTLLCNALLIAYAARALPEEALRLYALLNHAARPPVRSDHYTYSAALTA 114
Query: 114 CSENSDLPGLRFVHGGAI--VSGLGRDSITSSALVTAYS-----KLSLIDEAIKVFDGVS 166
C+ + L R VH + L ++ ++L+ Y+ + + +D ++FD +
Sbjct: 115 CARSRRLRLGRSVHAHMLRRARSLPDTAVLRNSLLNLYASSVRYREARVDVVRRLFDAMP 174
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW--EPSLLSVG 224
++V N++ + G ++L+LF ML G P + V + +PS
Sbjct: 175 KRNVVSWNTLFGWYVKTGRPQEALELFVRMLEDGFRPTPVSFVNIFPAAVADDPSWPF-- 232
Query: 225 QGIHGFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
++G +K + + +V S + M++ + SA VF+ + W+ +ITGY
Sbjct: 233 -QLYGLLVKYGVEYINDLFVVSSAIDMFSEFGDVQSARRVFDRAAKKNTEVWNTMITGYV 291
Query: 283 QQGDYGKALYYFRK-LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE-LS 340
Q G + +A+ F K L + D V S L AA++S +V G +HGY+I+ L
Sbjct: 292 QNGQFSEAIDLFSKILGSREVPLDVVTFLSALTAASQSQDVSLGQQLHGYLIKGMHRTLP 351
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V++ +ALV MYS+CG + +F+ + E++I+T+N+++ + F + ++ +
Sbjct: 352 VILGNALVVMYSRCGNVQTAFDLFDRLPEKDIVTWNTMVTAFIQNDFDLEGLLLVYEMQK 411
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G D T +A+L A + G + G++ + +GI+ + Y++ + +G +E
Sbjct: 412 SGFAADSVTLTAVLSASSNTGDLQIGKQAHGYLI-RHGIEGEGLES-YLIDMYAKSGRVE 469
Query: 461 EA 462
A
Sbjct: 470 MA 471
>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
Length = 786
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/530 (30%), Positives = 274/530 (51%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ +++H + K D F A LV +YA +L A +FD+ + + WN+II
Sbjct: 129 QGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCV 188
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
L + A L + + ++ + P+ FT + +AC+ + R +H I +G DS
Sbjct: 189 LHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSF 248
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
L+ YSK + +D+A VF + + D++ N++ISG + +++ LF M G
Sbjct: 249 LGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEG 308
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
++ TL ++ + + + IH LKS F+ +YV + L+ Y +C + A
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF DLV +++L+T Y+Q G +AL + ++ +G K D + +S+L A A +
Sbjct: 369 RVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLS 428
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G +H ++++ GF + ++LV+MY+KCG + F + R I++++++I
Sbjct: 429 AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIG 488
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
GL HG+ +A + F+ +++ G+ P+ T ++LCAC H GLV + + F M +GI+
Sbjct: 489 GLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIE 548
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY M+ LLG AG LE A + +P + V GALL I+ N DL E A
Sbjct: 549 PMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEM 608
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L +P K V+L+N YA G WD V ++R + D ++KE G+SW+
Sbjct: 609 LLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLE 658
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 122/462 (26%), Positives = 231/462 (50%), Gaps = 1/462 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + L K++H +V D F A LV LYA AR LFD P RS
Sbjct: 16 VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPDRS 75
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++ Y + +A SLF +++ + ++P+ F+ + + C+ D R +HG
Sbjct: 76 VVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHG 135
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G D+ +++ALV Y+K+ ++++A VFD ++ PD+V N++I+G + +
Sbjct: 136 YLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHR 195
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+L M + G P+ +TL + +L +G+ +H +K S ++ L+
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++CN M+ A VF + D++ W+A+I+G+SQ + +A F ++ +G +
Sbjct: 256 MYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTT 315
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+++VL + A + IH ++ GFE V ++L+D Y KCG++ +VFE
Sbjct: 316 LSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDATRVFEESP 375
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+++ + S++ G +A + ++ ++G+ PD S+LL AC G++
Sbjct: 376 IVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQ 435
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+ + ++G + +V + G++E+A +P
Sbjct: 436 VHVHIL-KFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/318 (29%), Positives = 166/318 (52%), Gaps = 6/318 (1%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
+K + F + + +AC+ DL + VHG +V+G D +++LV Y+K +A
Sbjct: 6 IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGLW 216
+FD + D +V N++ S + H +++ LF M+ G P+E++L +I +GL
Sbjct: 66 SLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGL- 124
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
E S+ G+ IHG+ +K +DS + ++ LV MYA+ + A VF+ + PD+V+W+A
Sbjct: 125 EDSVQ--GRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSWNA 182
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I G + +AL R++N G + ++S L A A A G +H +I+
Sbjct: 183 IIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMD 242
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ L+DMYSKC + VF+ M ER++I +N+VI G + +A F
Sbjct: 243 MGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEAASLFP 302
Query: 397 DIIEKGLNPDESTFSALL 414
+ +G+ +++T S +L
Sbjct: 303 LMHTEGIGFNQTTLSTVL 320
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 132/240 (55%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M LG +E+ ++ L +G+ +HG + + FDS ++V++ LV +YA+C
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A +F+++ +V+W+AL + Y +G+A+ F + + G + + ++S++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINV 120
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ G IHGY+I+ G++ ++ALVDMY+K G L VF+ +++ +I+++
Sbjct: 121 CTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPDIVSW 180
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N++I G LH + ++A E R++ + G+ P+ T S+ L AC L GR++ + + +
Sbjct: 181 NAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIK 240
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+++ G K + SVL A + ++ G +HG V+ GF+ V+++LV +Y+KCG
Sbjct: 1 MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGG 60
Query: 357 LGLGIQVFETMSERNIITYNSVI---LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
G +F+ + +R+++++N++ + +HG +A F D++ G+ P+E + S++
Sbjct: 61 FGDARSLFDAIPDRSVVSWNALFSCYVHSDMHG---EAVSLFHDMVLSGIRPNEFSLSSM 117
Query: 414 LCACCHGGLVN--DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ C GL + GR+I + + G + +V + G LE+A S + K
Sbjct: 118 INVCT--GLEDSVQGRKIHGYLI-KLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAK 174
Query: 472 PVDPAVSGALLSCCHIY 488
P D A+++ C ++
Sbjct: 175 P-DIVSWNAIIAGCVLH 190
>gi|225427607|ref|XP_002269121.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial [Vitis vinifera]
Length = 828
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 275/544 (50%), Gaps = 5/544 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+++ L L + +H L + + D L+ +Y+ + A +F P+R
Sbjct: 283 IIIPLCAELMLLREGRAVHGLTLRREMGLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPER 342
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN++I Y+ +A+ LF+ LL++ + T I +C + L +H
Sbjct: 343 DLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQCSLSTLLAILPSCDSSEFLQFGESIH 402
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMISGFAHCGFW 186
+ G + + ++L+ Y + + VS D+V N++++G G +
Sbjct: 403 CWQLKLGFANNPLAVNSLMLMYINCGDLVACFSLLQTVSAAADIVCWNTVMAGCTQNGHF 462
Query: 187 DKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++L+ F+ M + D L +IS LL G +HG LK+ +S V +
Sbjct: 463 WEALKAFNLMRQDPDVCHDSVALFNVISACGNLELLFAGGSLHGLALKTLMESDIRVQNA 522
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L++MY RC + +A +F + +L +W+ +I+ +SQ D +AL F + + +
Sbjct: 523 LITMYGRCGEIENARIIFGFSCNRNLCSWNCMISAFSQNKDGRRALELFCHIEFE---PN 579
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ I +L+A + + G IHG+VI+ + + VS+AL DMYS CG L Q+F+
Sbjct: 580 EITIVGILSACTQLGVLRHGKQIHGHVIRSRLQGNSFVSAALEDMYSNCGRLDTAFQIFQ 639
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ ER++ +NS+I G H +A E F ++ E G P +STF +LL AC H GLVN+
Sbjct: 640 SSPERSVAAWNSMISAFGFHSNGGKAIELFHEMRECGTRPTKSTFISLLSACSHSGLVNE 699
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G ++ M E + ++A TEH++ MV +LG AG L EAY FI +P +P V GALLS C
Sbjct: 700 GLWYYSNMLELFNVEADTEHHVCMVDMLGRAGRLGEAYEFIRQMPTQPEPGVWGALLSAC 759
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
+G+ + VA LFE +P Y + LSN Y GRW D ++LR I D GL+K A
Sbjct: 760 SYHGDLKMGREVAELLFELEPENVGYYISLSNMYVAAGRWKDAVELRRIIQDKGLKKPAA 819
Query: 546 VSWV 549
S +
Sbjct: 820 YSLI 823
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 191/380 (50%), Gaps = 3/380 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
+T L+ Y+ S+ LFD+ R V LWN++I A F A +LF L+ +
Sbjct: 10 STSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEGV 69
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
D+ T + A S +L R +HG + +GL DS +AL+ Y+K + +
Sbjct: 70 GLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSEC 129
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VF G+ D++ NSM+ G A+ + KSL F M + D +L +S
Sbjct: 130 VFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGE 189
Query: 221 LSVGQGIHGFCLKSSFD--SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
LS GQ IHG+ +K + S++ + L+S+Y++C + +A +F + + D+V+W+A++
Sbjct: 190 LSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAML 249
Query: 279 TGYSQQGDYGKALYYFRKLNMQG-KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
G + +A ++ + G + D V + ++ A+ + G +HG ++
Sbjct: 250 DGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREM 309
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
L V+++L+DMYSKC + VF+ + ER+++++N++I G +G + +A FR
Sbjct: 310 GLDFSVTNSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQ 369
Query: 398 IIEKGLNPDESTFSALLCAC 417
+++ ST A+L +C
Sbjct: 370 LLQSYSQCSLSTLLAILPSC 389
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 191/393 (48%), Gaps = 4/393 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
+V+ S +L++ + LH + K LL D F L+ +YA L S+ +F
Sbjct: 77 LIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSECVFGGMEY 136
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R + WNS++R A + + FK + + + DN + C A + +L + +
Sbjct: 137 RDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLGELSFGQVI 196
Query: 127 HGGAIVSGLGRDSITS--SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HC 183
HG I G S S ++L++ YS+ I A +F + D+V N+M+ G A +
Sbjct: 197 HGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAMLDGLALNQ 256
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
W+ L + L PD T+V +I E LL G+ +HG L+ V+
Sbjct: 257 RIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAVHGLTLRREMGLDFSVT 316
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+ MY++C + A HVF ++ DLV+W+A+I+GYSQ G +A + FR+L +
Sbjct: 317 NSLIDMYSKCKDVKRAEHVFKAIPERDLVSWNAMISGYSQNGHSREAQHLFRQLLQSYSQ 376
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ ++L + S + G IH + ++ GF + + ++L+ MY CG L +
Sbjct: 377 CSLSTLLAILPSCDSSEFLQFGESIHCWQLKLGFANNPLAVNSLMLMYINCGDLVACFSL 436
Query: 364 FETMS-ERNIITYNSVILGLGLHGFTYQAFEFF 395
+T+S +I+ +N+V+ G +G ++A + F
Sbjct: 437 LQTVSAAADIVCWNTVMAGCTQNGHFWEALKAF 469
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 162/292 (55%), Gaps = 3/292 (1%)
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
TS++L+TAYS+ + + +FD + D++L N+MI+ + ++ LF ++ G
Sbjct: 9 TSTSLLTAYSRAADFSSSWALFDEILYRDVILWNAMITASVENQCFGVAVNLFVELMGEG 68
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D TL+ ++S L+ G+ +HG K+ S ++ + L+ MYA+C ++S+
Sbjct: 69 VGLDSTTLLIVVSASSHMGNLTQGRVLHGISFKTGLLSDSFLCNALIDMYAKCGELSSSE 128
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + D+++W++++ G + K+L+YF+K+ ++AD V + ++A+A
Sbjct: 129 CVFGGMEYRDIISWNSMMRGCAYNNYPKKSLWYFKKMAYSSEQADNVSLTCAVSASALLG 188
Query: 321 NVWPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G VIHG+ I+ G++ S ++L+ +YS+C + +F+ M ++I+++N++
Sbjct: 189 ELSFGQVIHGWGIKLGYKDISHNSFENSLISLYSQCRDIQAAEILFKEMKYKDIVSWNAM 248
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREI 429
+ GL L+ ++AF+ ++ G + PD T ++ C L+ +GR +
Sbjct: 249 LDGLALNQRIWEAFDLLHEMQLLGCVQPDSVTVVIIIPLCAELMLLREGRAV 300
>gi|449482345|ref|XP_004156253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Cucumis sativus]
Length = 614
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 161/483 (33%), Positives = 258/483 (53%), Gaps = 6/483 (1%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP--GLRFVHGG 129
WN+ +R A +F A SL+ +LR +P+ FT+ ++C+ S LP G +F HG
Sbjct: 8 WNTQLRELAKRCQFLQALSLYPQMLRHGDRPNAFTFPFALKSCAALS-LPILGSQF-HGQ 65
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLC-NSMISGFAHCGFWD 187
G + + L++ Y K SL+D A KVF+ L +C N+++SG+
Sbjct: 66 ITKVGCVFEPFVQTGLISMYCKGSLVDNARKVFEENFHSRKLTVCYNALVSGYVSNSKCS 125
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++ LF M G + TL+GLI P L +G +H LK FDS V + +
Sbjct: 126 DAVLLFRQMNEEGVPVNSVTLLGLIPACVSPINLELGSSLHCSTLKYGFDSDVSVVNCFI 185
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MY +C +N A +F+ + L++W+A+++GY+Q G L +R ++M G DPV
Sbjct: 186 TMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGLATNVLELYRNMDMNGVHPDPV 245
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ VL++ A G + + GF + +++AL++MY++CG L VF+ M
Sbjct: 246 TLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNALINMYARCGNLTKAQAVFDGM 305
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ER ++++ ++I G G+HG A + F+++I G+ PD + F +L AC H GL + G
Sbjct: 306 PERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPDGTAFVCVLSACSHAGLTDQGL 365
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
E F M Y ++ EHY MV LLG AG L+EA + I S+P D AV GALL C I
Sbjct: 366 EYFKMMKRNYQLEPGPEHYSCMVDLLGRAGRLKEAQTLIESMPIKPDGAVWGALLGACKI 425
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ N +LAE+ ++ E +P Y V+LSN Y+ V+++R + + L+K+ G S
Sbjct: 426 HKNVELAELAFERVIELEPENIGYYVLLSNIYSNANNSKGVLRIRIMMKEKKLKKDPGCS 485
Query: 548 WVS 550
+V
Sbjct: 486 YVE 488
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 10/260 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K D + +Y + A+ LFD+ P + + WN+++ YA
Sbjct: 165 LHCSTLKYGFDSDVSVVNCFITMYMKCGSVNYAQKLFDEMPVKGLISWNAMVSGYAQNGL 224
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ L++N+ + PD T + +C+ V SG + ++A
Sbjct: 225 ATNVLELYRNMDMNGVHPDPVTLVGVLSSCANLGAQSVGHEVEFKMQASGFTSNPFLNNA 284
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y++ + +A VFDG+ + LV ++I G+ G + ++QLF M+R G PD
Sbjct: 285 LINMYARCGNLTKAQAVFDGMPERTLVSWTAIIGGYGMHGHGEIAVQLFKEMIRSGIEPD 344
Query: 205 EYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
V ++S GL + L + L+ + Y S +V + R + A
Sbjct: 345 GTAFVCVLSACSHAGLTDQGLEYFKMMKRNYQLEPGPEHY----SCMVDLLGRAGRLKEA 400
Query: 260 YHVFNSL-FHPDLVTWSALI 278
+ S+ PD W AL+
Sbjct: 401 QTLIESMPIKPDGAVWGALL 420
>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g01510-like [Vitis vinifera]
Length = 681
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 167/544 (30%), Positives = 275/544 (50%), Gaps = 5/544 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ + L R K+LHAL+ A F LV +Y+ L A LFD PQR+
Sbjct: 11 VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLFDTMPQRN 70
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W ++I + +F++A F + P F ++ RAC+ + + +H
Sbjct: 71 LVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHC 130
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ G+G + S L YSK + +A KVF+ + D V +MI G++ G +++
Sbjct: 131 LALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYSKIGEFEE 190
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L F M+ T D++ L + G+ +H +K F+S +V + L
Sbjct: 191 ALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVGNALTD 250
Query: 249 MYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY++ M SA +VF ++V+++ LI GY + K L F +L QG + +
Sbjct: 251 MYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEF 310
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+S++ A A A + G +H V++ F+ VSS LVDMY KCG L IQ F+ +
Sbjct: 311 TFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAIQAFDEI 370
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ I +NS++ G HG A + F ++++G+ P+ TF +LL C H GLV +G
Sbjct: 371 GDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL 430
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCC 485
+ F M + YG+ EHY ++ LLG AG L+EA FI + P +P G + L C
Sbjct: 431 DYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM--PFEPNAFGWCSFLGAC 488
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+G+ ++ ++ A +L + +P+ V+LSN YA + +W+DV +R + D ++K G
Sbjct: 489 RIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVKKLPG 548
Query: 546 VSWV 549
SWV
Sbjct: 549 YSWV 552
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 110/214 (51%)
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D L +I + L G+ +H + + + ++++ LV+MY++C ++ A +F
Sbjct: 4 DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+++ +LV+W+A+I+G SQ + +A+ F + + G+ +S + A A ++
Sbjct: 64 DTMPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIE 123
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H ++ G + V S L DMYSKCG + +VFE M ++ +++ ++I G
Sbjct: 124 MGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWTAMIDGYS 183
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G +A F+ +I++ + D+ + L AC
Sbjct: 184 KIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGAC 217
>gi|297741017|emb|CBI31329.3| unnamed protein product [Vitis vinifera]
Length = 753
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 279/541 (51%), Gaps = 25/541 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL+ ++LH + + P KLV Y+ N+L A ++ + + F WN +I
Sbjct: 114 KSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLI 173
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+Y A S +K +++ ++PDNFTY + +AC E DL G G
Sbjct: 174 SSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDL-------------GFG 220
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDL----VLCNSMISGFAHCGFWDKSLQL 192
++ + S + Y+ + + +EA ++F + D+ ++ N++ G+ G + +L+L
Sbjct: 221 KE-VHESINASLYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYKGALEL 279
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLL---SVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
M + G D V LI GL S + +G+ IH F ++S F D V + L++M
Sbjct: 280 LSQMRKCGSHLDS---VALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALITM 336
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y+RC + AY +F + L+TW+++I+G +A + R++ + G + + V I
Sbjct: 337 YSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYVTI 396
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
ASVL A+ AN+ G H Y+ + F+ +++ +ALVDMY++ G + +VF+ +
Sbjct: 397 ASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEARRVFDMLG 456
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
ER+ +TY S+I G G+ G A + F ++ + PD T A+L AC H GLV G+
Sbjct: 457 ERDKMTYTSMIAGYGMQGEGQAALKLFEEMNNFQIKPDHITMIAVLSACSHSGLVTQGQL 516
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
+F +M YG+ EH+ M L G AG L +A I ++P PA+ L+ C I+
Sbjct: 517 LFEKMRSLYGLTPHLEHFACMTDLFGRAGLLNKAKEIIRNMPYKPTPAMWATLIGACRIH 576
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N+++ E A +L E P Y V+++N YA G W+ + K+R + D G+RK G +W
Sbjct: 577 RNTEIGEWAAEKLLEMKPENPGYYVLIANMYAAAGCWNKLAKVRIFMRDLGVRKAPGCAW 636
Query: 549 V 549
V
Sbjct: 637 V 637
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 157/354 (44%), Gaps = 18/354 (5%)
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
+C++ L R +HG I G + I LVT YS +L+ +A + + +
Sbjct: 109 SCTDVKSLAEGRQLHGHIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFP 168
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N +IS + GF K+L + M++ G PD +T ++ E L G+ +H
Sbjct: 169 WNLLISSYVRNGFCQKALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVH---- 224
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD----LVTWSALITGYSQQGDYG 288
S+ S+YA N A+ +F S++ D ++ W+ + GY + G+Y
Sbjct: 225 ----------ESINASLYASMGMWNEAFELFGSMWAEDIELNIIIWNTIAGGYLRTGNYK 274
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
AL ++ G D V + L A + + G IH + I+ F V +AL+
Sbjct: 275 GALELLSQMRKCGSHLDSVALIIGLGACSHIGDAKLGKEIHSFAIRSCFGEVDTVKNALI 334
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
MYS+C L +F+ M +++IT+NS+I G + +A R+++ G+ P+
Sbjct: 335 TMYSRCKDLKHAYLLFQLMEAKSLITWNSIISGCCHMDRSEEASFLLREMLLFGIEPNYV 394
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
T +++L C + G+E MT + + +V + +G + EA
Sbjct: 395 TIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYARSGKVLEA 448
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
P L V Q I F K S V V A CN + SA F S+ D +L
Sbjct: 9 PKGLFVSQ-IQRFIPKKWKQSIKPVDIQHVHPSASCNALESAQETFTSV---DASMIDSL 64
Query: 278 ITGYSQQGDYGKALYYFR-----KLNMQGKKADPVL--IASVLAAAAKSANVWPGAVIHG 330
+T + G L F+ +L+ D ++ I+S+L++ ++ G +HG
Sbjct: 65 LTSLKEFTSRGNLLDAFKTVSLIRLHASSASQDLIVHPISSLLSSCTDVKSLAEGRQLHG 124
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
++I GFE ++ LV YS L + E + + +N +I +GF +
Sbjct: 125 HIISLGFEQHPILVPKLVTFYSAFNLLVDAHVITENSNILHPFPWNLLISSYVRNGFCQK 184
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
A ++ +++KG+ PD T+ ++L AC + G+E+
Sbjct: 185 ALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEV 223
>gi|242096002|ref|XP_002438491.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
gi|241916714|gb|EER89858.1| hypothetical protein SORBIDRAFT_10g020540 [Sorghum bicolor]
Length = 794
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 180/579 (31%), Positives = 285/579 (49%), Gaps = 33/579 (5%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLR--DPFYATKLVRLYALNNVLPSARIL 60
F L ++L S + L +E HA K L + F L+ +YA ++ A+ L
Sbjct: 161 FTLVSVLLACSHLAEDLRLGREAHAFALKNGFLDGDERFAFNALLSMYARLGLVDDAQTL 220
Query: 61 F-----DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
F P V WN+++ + R +A + +++ ++PD T+A ACS
Sbjct: 221 FGSVGATDVPGGGVVTWNTMVSLLVQSGRCGEAIEVLYDMVARGVRPDGVTFASALPACS 280
Query: 116 ENSDLPGLRFVHGGAIVSG-LGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVL 172
+ L R +H + L +S +SALV Y+ + A VFD V + L L
Sbjct: 281 QLEMLSLGREMHAYVLKDADLAANSFVASALVDMYASHERVGAARLVFDMVPAGERQLGL 340
Query: 173 CNSMISGFAHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N+MI G+A G + +L+LF M G P E T+ G++ + + +HG+
Sbjct: 341 WNAMICGYAQAGLDEDALELFARMETEAGVVPSETTIAGVLPSCARSETFAGKEAVHGYV 400
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
+K +V + L+ +YAR M++A +F ++ D+V+W+ LITG QG A
Sbjct: 401 VKRGMADNPFVQNALMDLYARLGDMDAARWIFATIEPRDVVSWNTLITGCVVQGHIRDAF 460
Query: 292 YYFRKLNMQGKKAD-------------PVL-----IASVLAAAAKSANVWPGAVIHGYVI 333
R++ QG+ D PV+ + ++L A A G IHGY +
Sbjct: 461 QLVREMQQQGRFTDAATEDGIAGADEEPVVPNNITLMTLLPGCAMLAAPARGKEIHGYAV 520
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+H + V V SALVDMY+KCG L L VF+ + RN+IT+N +I+ G+HG +A
Sbjct: 521 RHALDSDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAIA 580
Query: 394 FF-RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
F R + P+E TF A L AC H G+V+ G E+F M +G++ + + V +
Sbjct: 581 LFDRMVASDEAKPNEVTFIAALAACSHSGMVDRGLEMFRSMKRNHGVEPTPDLHACAVDI 640
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
LG AG L+EAY I S+ +P + VS + L C ++ N L EI A +LFE +P + +
Sbjct: 641 LGRAGRLDEAYRIISSM-EPGEQQVSAWSSFLGACRLHRNVALGEIAAERLFELEPDEAS 699
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ V+L N Y+ G W+ ++R + G+ KE G SW+
Sbjct: 700 HYVLLCNIYSAAGLWEKSSEVRSRMRQRGVSKEPGCSWI 738
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 199/407 (48%), Gaps = 14/407 (3%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATK--LVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
+SL+ + +H + LL P A L+ YA L +A LFD P R +NS
Sbjct: 71 RSLTAVRSIHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNS 130
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVS 133
+I A L R+ A +++L +FT + ACS DL R H A+ +
Sbjct: 131 LIAALCLFRRWLPALDALRDMLLEGHPLTSFTLVSVLLACSHLAEDLRLGREAHAFALKN 190
Query: 134 GL--GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD-----LVLCNSMISGFAHCGFW 186
G G + +AL++ Y++L L+D+A +F V D +V N+M+S G
Sbjct: 191 GFLDGDERFAFNALLSMYARLGLVDDAQTLFGSVGATDVPGGGVVTWNTMVSLLVQSGRC 250
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYDYVSSV 245
+++++ M+ G PD T + + +LS+G+ +H + LK + + +V+S
Sbjct: 251 GEAIEVLYDMVARGVRPDGVTFASALPACSQLEMLSLGREMHAYVLKDADLAANSFVASA 310
Query: 246 LVSMYARCNCMNSAYHVFNSL--FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GK 302
LV MYA + +A VF+ + L W+A+I GY+Q G AL F ++ + G
Sbjct: 311 LVDMYASHERVGAARLVFDMVPAGERQLGLWNAMICGYAQAGLDEDALELFARMETEAGV 370
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
IA VL + A+S +HGYV++ G + V +AL+D+Y++ G +
Sbjct: 371 VPSETTIAGVLPSCARSETFAGKEAVHGYVVKRGMADNPFVQNALMDLYARLGDMDAARW 430
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
+F T+ R+++++N++I G + G AF+ R++ ++G D +T
Sbjct: 431 IFATIEPRDVVSWNTLITGCVVQGHIRDAFQLVREMQQQGRFTDAAT 477
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 7/106 (6%)
Query: 328 IHGYVIQHGF--ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
IHG ++H + VS+AL+ Y++CG L + +F+ M R+ +T+NS+I L L
Sbjct: 79 IHGAALRHDLLDGPTPAVSNALLTAYARCGDLTAALALFDAMPSRDAVTFNSLIAALCLF 138
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND---GRE 428
A + RD++ +G T ++L AC H L D GRE
Sbjct: 139 RRWLPALDALRDMLLEGHPLTSFTLVSVLLACSH--LAEDLRLGRE 182
>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
1
gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 684
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 169/548 (30%), Positives = 277/548 (50%), Gaps = 7/548 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L+ + S S+ + +HA + K PF A L+ +Y+ + SAR++ TP
Sbjct: 11 LLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPA 70
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R+V W S+I A F+ A F + R + P++FT+ C +A + + +
Sbjct: 71 RNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQI 130
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H A+ G D + Y K L D+A K+FD + + +L N+ IS G
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRP 190
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++++ F R+ P+ T ++ + L++G +HG L+S FD+ V + L
Sbjct: 191 REAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGL 250
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ Y +C + S+ +F + + V+W +L+ Y Q + KA + + +
Sbjct: 251 IDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSD 310
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+I+SVL+A A A + G IH + ++ E ++ V SALVDMY KCG + Q F+
Sbjct: 311 FMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDE 370
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES--TFSALLCACCHGGLVN 424
M E+N++T NS+I G G A F ++ +G P + TF +LL AC G V
Sbjct: 371 MPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVE 430
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALL 482
+G +IF M YGI+ EHY +V +LG AG +E AY FI + P+ P +S GAL
Sbjct: 431 NGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM--PIQPTISVWGALQ 488
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
+ C ++G L + A LF+ DP+ V+LSNT+A GRW + +R+++ G++K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 543 EAGVSWVS 550
AG SW++
Sbjct: 549 GAGYSWIT 556
>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
Length = 784
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 166/527 (31%), Positives = 268/527 (50%), Gaps = 15/527 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H + K D + L+ +Y + A +FD+ P R + WNS++ Y +
Sbjct: 144 QKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSWNSMVSGYQID 203
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ FK +LR K D F ACS L +H I S L D +
Sbjct: 204 GDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIRSELELDIMVQ 263
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y K +D A +VF+ + ++V N+MI G +Q D ++
Sbjct: 264 TSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGG----------MQEDDKVI----- 308
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T++ L+ + L G+ IHGF ++ F Y + + LV MY +C + A HV
Sbjct: 309 PDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHV 368
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FN + ++V+W+ ++ Y Q Y +AL F+ + + K D + IASVL A A+ A+
Sbjct: 369 FNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASR 428
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH Y+++ G + +S+A+V MY+KCG L + F+ M ++++++N++I+
Sbjct: 429 SEGKQIHSYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAY 488
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+HGF + +FF ++ KG P+ STF +LL AC GL+++G F M EYGI
Sbjct: 489 AIHGFGRTSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPG 548
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY M+ LLG GNL+EA FI +P + G+LL+ + + LAE+ A +
Sbjct: 549 IEHYGCMLDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHIL 608
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN YAE GRW+DV +++ + + GL K G S V
Sbjct: 609 SLKHDNTGCYVLLSNMYAEAGRWEDVDRIKYLMKEQGLVKTVGCSMV 655
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/413 (28%), Positives = 206/413 (49%), Gaps = 16/413 (3%)
Query: 53 VLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITR 112
++ +A +F+K F+WN IIR Y F +A + + ++ DNFT+ + +
Sbjct: 73 LMGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIK 132
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
AC E L + VHG I G D + L+ Y K+ I+ A KVFD + DLV
Sbjct: 133 ACGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVS 192
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
NSM+SG+ G SL F MLRLG D + ++ + L G IH +
Sbjct: 193 WNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVI 252
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+S + V + L+ MY +C ++ A VFN ++ ++V W+A+I G Q+ D K +
Sbjct: 253 RSELELDIMVQTSLIDMYGKCGKVDYAERVFNRIYSKNIVAWNAMIGGM-QEDD--KVI- 308
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
D + + ++L + ++S + G IHG+ I+ F +++ +ALVDMY
Sbjct: 309 -----------PDVITMINLLPSCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYG 357
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG L L VF M+E+N++++N+++ + +A + F+ I+ + L PD T ++
Sbjct: 358 KCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQNEQYKEALKMFQHILNEPLKPDAITIAS 417
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
+L A ++G++I + + + G+ + T +V + G+L+ A F
Sbjct: 418 VLPAVAELASRSEGKQIHSYIM-KLGLGSNTFISNAIVYMYAKCGDLQTAREF 469
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 102/209 (48%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K +H + L T LV +Y L A +F++ ++++ WN+++
Sbjct: 326 ALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVA 385
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY ++ +A +F+++L LKPD T A + A +E + + +H + GLG
Sbjct: 386 AYVQNEQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGS 445
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++ S+A+V Y+K + A + FDG+ D+V N+MI +A GF S+Q F M
Sbjct: 446 NTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMR 505
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
G P+ T V L++ L+ G G
Sbjct: 506 GKGFKPNGSTFVSLLTACSISGLIDEGWG 534
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 110/219 (50%), Gaps = 10/219 (4%)
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M +A +F + H D W+ +I GY+ G + +A+ ++ ++ +G ++D V+ A
Sbjct: 74 MGNALDMFEKMNHSDTFIWNVIIRGYTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKA 133
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ + G +HG +I+ GF+L V V + L+DMY K G++ L +VF+ M R+++++
Sbjct: 134 CGELLALMVGQKVHGKLIKIGFDLDVYVCNFLIDMYLKIGFIELAEKVFDEMPVRDLVSW 193
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
NS++ G + G + F++++ G D + L AC + G EI ++
Sbjct: 194 NSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIR 253
Query: 436 ---EYGIQAKTEHYIYMVKLLGLAGNL---EEAYSFIWS 468
E I +T ++ + G G + E ++ I+S
Sbjct: 254 SELELDIMVQTS----LIDMYGKCGKVDYAERVFNRIYS 288
>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
Length = 886
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 174/549 (31%), Positives = 274/549 (49%), Gaps = 13/549 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S SL +LHA + K D L+ +YA L A +FD P+R+
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPERN 265
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +++ + + LF + + P+ FT + +AC + G++ +HG
Sbjct: 266 VVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTR-AGVQ-IHG 323
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G + +++LV YSK +A +VFD + +L NSMISG+AH G
Sbjct: 324 VCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQGRD 383
Query: 189 SLQLFDWMLRL-GKTPDEYTLVGLI---SGL---WEPSLLSVGQGIHGFCLKSSFDSYDY 241
SL +F M R + PDE+T L+ SGL E + + + G S S
Sbjct: 384 SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGV----SPASNAI 439
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
++ L+ +Y +C+ + A VF+ L + + W+ +I G++Q+G +A+ FR+ G
Sbjct: 440 LAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSG 499
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+AD +++SV+A A A V G +H Y + L V V+++LVDMY KCG G
Sbjct: 500 VRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTGEAG 559
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ F M RN++++ ++I G+G HG +A + F ++ +G+ DE + ALL AC H G
Sbjct: 560 RRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACSHSG 619
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV++ R F+R+ ++ ++ K EHY MV LLG AG L EA I S+P V L
Sbjct: 620 LVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVWQTL 679
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
LS C ++ + + V L D VMLSN AE G W + +R + GLR
Sbjct: 680 LSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRKGLR 739
Query: 542 KEAGVSWVS 550
K+ G SW
Sbjct: 740 KQGGCSWTE 748
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 166/325 (51%), Gaps = 5/325 (1%)
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
A + RA + S L G +H + G G D++ ++ L+ Y+K + A +VFDG+ +
Sbjct: 204 ADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGMPE 263
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
++V +++ GF H G + L+LF M G +P+E+TL + + G I
Sbjct: 264 RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQI 321
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
HG C+++ F+ +D V++ LV MY++ A VF+ + +L TW+++I+GY+ G
Sbjct: 322 HGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNSMISGYAHAGQG 381
Query: 288 GKALYYFRKLNMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS--VMVS 344
+L FR++ + ++ D AS+L A + GA +H + G + +++
Sbjct: 382 RDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAILA 441
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
AL+D+Y KC L + +QVF+ + RN I + +VI+G G +A FR G+
Sbjct: 442 GALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFWSSGVR 501
Query: 405 PDESTFSALLCACCHGGLVNDGREI 429
D S+++ LV G+++
Sbjct: 502 ADGHVLSSVVAVFADFALVEQGKQV 526
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 74/122 (60%), Gaps = 2/122 (1%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+IA +L A+A+ +++ G +H +++ GF M+++ L+DMY+KCG L + +VF+ M
Sbjct: 202 MIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM 261
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ERN++++ ++++G HG + F ++ G +P+E T SA L AC GG G
Sbjct: 262 PERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKAC--GGGTRAGV 319
Query: 428 EI 429
+I
Sbjct: 320 QI 321
>gi|326528029|dbj|BAJ89066.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 639
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 181/540 (33%), Positives = 281/540 (52%), Gaps = 24/540 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK--TPQRSVFLWNS 74
Q L +ELHA + K L DP A+KL+ YAL LP++R +F PQ + FL N+
Sbjct: 69 QHLHHVQELHAQLLKHGLHLDPLAASKLISSYALQRRLPASRRIFASFPNPQATTFLPNT 128
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
++RAYAL + A SLF + + D+FTY+ + +A S +S L LR VH + G
Sbjct: 129 LLRAYALNALPHAAVSLFSAMPQR----DSFTYSFLIKALS-SSGLTPLRAVHSHVVKLG 183
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D+ +AL+ AYSK +A KVF+ + D V NS ++ G + ++FD
Sbjct: 184 SIEDTYVGNALIDAYSKNGGFLDASKVFEEMPRRDTVSWNSAMAAMVRQGEVASARRMFD 243
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSL---LSVGQGIHGFCLKSSFDSYDYVS-SVLVSMY 250
M PD+ T+ W L G+ F L + VS S +VS Y
Sbjct: 244 EM------PDKDTVS------WNTVLDGYTKAGKMEDAFELFQCMPERNVVSWSTVVSGY 291
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+ + A +F+ + +LVTW+ +++ +Q G +A F ++ + D +
Sbjct: 292 CKKGDIEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVV 351
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET-MSE 369
S+LAA A+S ++ G IH YV S V +A++DM+ KCG + VF+T ++E
Sbjct: 352 SILAACAESGSLALGKRIHRYVRTRQLGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAE 411
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ +++N++I G +HG +A +FF + +G PD T +L AC H G V +GR+
Sbjct: 412 KDSVSWNTIIGGFAMHGHGDKALDFFAQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQH 471
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F+ M +YGI + EHY M+ LLG G +EEA I S+P + + G+LLS C ++
Sbjct: 472 FSNMERDYGIVPQIEHYGCMIDLLGRGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLHK 531
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N + AEI ++L + P +LSN YAE G+W D+ K R + G +K AG SW+
Sbjct: 532 NVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKSAGSSWI 591
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 177/394 (44%), Gaps = 29/394 (7%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F FL+ LS S L+ + +H+ V K + D + L+ Y+ N A +F+
Sbjct: 155 FTYSFLIKALSSS--GLTPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFLDASKVFE 212
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R WNS + A A+ +F + PD T S N+ L G
Sbjct: 213 EMPRRDTVSWNSAMAAMVRQGEVASARRMFDEM------PDKDT-------VSWNTVLDG 259
Query: 123 LRFVHGGAIVSGL-------GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
+ G + R+ ++ S +V+ Y K I+ A +FD + +LV
Sbjct: 260 --YTKAGKMEDAFELFQCMPERNVVSWSTVVSGYCKKGDIEMARVIFDKMPTKNLVTWTI 317
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
M+S A G +++ +LF M D +V +++ E L++G+ IH +
Sbjct: 318 MVSACAQNGLVEEAGRLFTQMKEAAVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQ 377
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNS-LFHPDLVTWSALITGYSQQGDYGKALYYF 294
+V + ++ M+ +C C+N A +VF++ + D V+W+ +I G++ G KAL +F
Sbjct: 378 LGRSTHVCNAMIDMFCKCGCVNRADYVFDTEIAEKDSVSWNTIIGGFAMHGHGDKALDFF 437
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS--SALVDMYS 352
++ +QG + D V + +VL+A V G H ++ + + + ++D+
Sbjct: 438 AQMKLQGFRPDAVTMINVLSACTHMGFVEEGRQ-HFSNMERDYGIVPQIEHYGCMIDLLG 496
Query: 353 KCGYLGLGIQVFETMS-ERNIITYNSVILGLGLH 385
+ G + + + ++M + N + + S++ LH
Sbjct: 497 RGGLIEEAVGLIKSMPWDPNEVIWGSLLSACRLH 530
>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 177/574 (30%), Positives = 276/574 (48%), Gaps = 48/574 (8%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
HAL + + F LV +Y+ L AR +FD+ V WNSII +YA +
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 86 NDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +F + +PDN T + C+ + +H A+ S + ++ +
Sbjct: 210 KVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNC 269
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD---------- 194
LV Y+K ++DEA VF +S D+V N+M++G++ G ++ +++LF+
Sbjct: 270 LVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMD 329
Query: 195 ---W----------------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
W ML G P+E TL+ ++SG L G+ IH
Sbjct: 330 VVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHC 389
Query: 230 FCLKSSFD-------SYDYVSSVLVSMYARCNCMNSAYHVFNSLF--HPDLVTWSALITG 280
+ +K D + V + L+ MYA+C +++A +F+SL D+VTW+ +I G
Sbjct: 390 YAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGG 449
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
YSQ GD KAL ++ + + P I+ L A A A + G IH Y +++
Sbjct: 450 YSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN 509
Query: 339 -LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ + VS+ L+DMY+KCG + VF+ M +N +T+ S++ G G+HG+ +A F +
Sbjct: 510 AVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ G D T +L AC H G+++ G E F RM +G+ EHY +V LLG AG
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAG 629
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L A I +P P V A LSCC I+G +L E A ++ E +LSN
Sbjct: 630 RLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSN 689
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
YA GRW DV ++R + G++K G SWV G
Sbjct: 690 LYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEG 723
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 211/462 (45%), Gaps = 50/462 (10%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP--QRSVFLWNS 74
+++S+ K +H + +L + L+ Y L A L + P V+ WNS
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNL-TSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+IR+Y N LF + PDN+T+ + +AC E S + H ++V+G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ +ALV YS+ + +A KVFD +S D+V NS+I +A G +L++F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 195 WML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M G PD TLV ++ S+G+ +H F + S +V + LV MYA+C
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ------------- 300
M+ A VF+++ D+V+W+A++ GYSQ G + A+ F K+ +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 301 ----------------------GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
G K + V + SVL+ A + G IH Y I++ +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 339 LSV-------MVSSALVDMYSKCGYLGLGIQVFETMS--ERNIITYNSVILGLGLHGFTY 389
L MV + L+DMY+KC + +F+++S ER+++T+ +I G HG
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 390 QAFEFFRDIIEKGLN--PDESTFSALLCACCHGGLVNDGREI 429
+A E ++ E+ P+ T S L AC + G++I
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/143 (20%), Positives = 62/143 (43%), Gaps = 2/143 (1%)
Query: 23 KELHALVAKASLLRDPFYATK-LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K++HA + P + + L+ +YA + AR++FD ++ W S++ Y +
Sbjct: 497 KQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGM 556
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLGRDSI 140
+A +F + R K D T + ACS + + G+ + + V G+
Sbjct: 557 HGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPE 616
Query: 141 TSSALVTAYSKLSLIDEAIKVFD 163
+ LV + ++ A+++ +
Sbjct: 617 HYACLVDLLGRAGRLNAALRLIE 639
>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 792
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 265/509 (52%), Gaps = 4/509 (0%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-L 100
+ +V++Y + AR +FD+ P++ LWN++I Y + ++ +F++L+
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+ D T I A +E +L +H A +G + ++ YSK I A
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMAST 277
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
+F PD+V N+MI G+ G + SL LF ++ G TLV L+ L
Sbjct: 278 LFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLML 337
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ IHG+ LKS+F S+ VS+ L ++Y++ N + SA +F+ L +W+A+I+G
Sbjct: 338 I---YAIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y+Q G A+ FR++ +PV I +L+A A+ + G +H V FE S
Sbjct: 395 YTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ VS+AL+ MY+KCG + ++F+ M ++N +T+N++I G GLHG +A F +++
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLN 514
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G+ P TF +L AC H GLV +G EIF M YG + +HY +V +LG AG+L+
Sbjct: 515 SGIAPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQ 574
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
A FI ++P P+V LL C I+ +++LA V+ +LFE DP Y V+LSN ++
Sbjct: 575 RALQFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
D + +R L K G + +
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 128/467 (27%), Positives = 232/467 (49%), Gaps = 12/467 (2%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+L K S+S + HA + D TKL + + + AR +F + V
Sbjct: 24 LDLFKRSTSISHLAQTHAQIVLHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHG 128
FL+N ++R +++ + + ++F +L + T LKP++ TYA A S D +HG
Sbjct: 84 FLFNVLMRGFSVNESPHSSLAVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGCVIHG 143
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AIV G + + S +V Y K +++A KVFD + + D +L N+MISG+ + +
Sbjct: 144 QAIVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 203
Query: 189 SLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
S+Q+F ++ T D TL+ ++ + E L +G IH K+ S+DYV + +
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
S+Y++C + A +F PD+V ++A+I GY+ G+ +L F++L + G K
Sbjct: 264 SLYSKCGKIKMASTLFREFRRPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSS 323
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ S++ + ++ IHGY ++ F VS+AL +YSK + ++F+
Sbjct: 324 TLVSLVPVSGHLMLIY---AIHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDES 380
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E+++ ++N++I G +G T A FR++ +P+ T + +L AC G ++ G+
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGK 440
Query: 428 EI--FTRMTE-EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ R T+ E I T ++ + G++ EA +PK
Sbjct: 441 WVHDLVRSTDFESSIYVSTA----LIGMYAKCGSIAEARRLFDFMPK 483
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 118/260 (45%), Gaps = 10/260 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H K++ L +T L +Y+ N + SAR LFD++P++S+ WN++I Y
Sbjct: 341 IHGYSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
DA SLF+ + ++ P+ T CI AC++ L ++VH + S+A
Sbjct: 401 TEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K I EA ++FD + + V N+MISG+ G ++L +F ML G P
Sbjct: 461 LIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPT 520
Query: 205 EYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
T + ++ L+ G IH + + S Y + +V + R + A
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY----ACVVDILGRAGHLQRA 576
Query: 260 YHVFNSL-FHPDLVTWSALI 278
++ P W L+
Sbjct: 577 LQFIEAMPIQPGPSVWETLL 596
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 50/98 (51%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H LV + +T L+ +YA + AR LFD P+++ WN++I
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMIS 494
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y L +A ++F +L + + P T+ C+ ACS
Sbjct: 495 GYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACS 532
>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 246/440 (55%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
I + C++ L + H ++ GL D +TS+ L+ YSK +D A +VFD +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
LV N+MI G +++L L M R G E+T+ ++ LS Q +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
F +K++ D +V++ L+ +YA+C M A VF S+ +VTWS++ GY Q Y +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL FRK G K D L++SV+ A A A + G ++ + + GF ++ V+S+L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MY+KCG + +VF + +RN++ +N++I GL H + + F + + GL+P++ T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
F ++L AC H GLV G++ F MT+E+ + HY MV L AG + EAY I L
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P ++ G+LL+ C +GN +LAE+ A +LF+ +P ++LSN YA +G+WD+V
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489
Query: 530 KLRDDIVDNGLRKEAGVSWV 549
K+R + ++ ++KE G SW+
Sbjct: 490 KMRKLLKESDVKKERGKSWI 509
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 7/370 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L + K HA + L D + L+ +Y+ + AR +FD+ P RS
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I + N+A L + R FT + + AC+ L + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI + + + ++AL+ Y+K L+ +A+ VF+ + D +V +SM +G+ +++
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF G D++ + +I + + G+ ++ KS F S +V+S L+
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASSLID 309
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + +Y VF + ++V W+A+I+G S+ + + F K+ G + V
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 309 IASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SVL+A V G + +H +V S +VD S+ G Q+FE
Sbjct: 370 FVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG------QIFEAY 423
Query: 368 SERNIITYNS 377
+ + +N+
Sbjct: 424 DLISKLPFNA 433
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ +L AK + G H ++ G + ++ S+ L++MYSKCG + QVF+ M
Sbjct: 66 FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEM 125
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
R+++++N++I L +G +A + + +G E T S++LCAC
Sbjct: 126 PSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCAC 175
>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Brachypodium distachyon]
Length = 796
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 271/539 (50%), Gaps = 8/539 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +HAL L F + LV +YA + AR +FD T +R WNS++
Sbjct: 130 LKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSG 189
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGL-RFVHGGAIVSGLG 136
Y + +F + R + ++F + + CS + + G+ VHG + +GL
Sbjct: 190 YLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLD 249
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA------HCGFWDKSL 190
D +SA+V Y+K + EA+ +F V DP++V+ N+MI+G H ++L
Sbjct: 250 TDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREAL 309
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
L+ + G P E+T +I + G+ IHG LK F D++ S L+ +Y
Sbjct: 310 SLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLY 369
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
CM + F S+ D+VTW+A+I+G Q + +AL F +L G K DP I+
Sbjct: 370 FNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTIS 429
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SV+ A A A V G + + + GF+ + ++ + MY++ G + IQ F+ M
Sbjct: 430 SVMNACASLAVVRTGEQMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESH 489
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
++++++++I HG QA +FF +++ + P+E TF +L AC HGGLV++G +
Sbjct: 490 DVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYY 549
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M EYG+ +H +V LLG AG L +A +FI +P V +LL C I+ +
Sbjct: 550 EIMKMEYGLCPTVKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRD 609
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ ++VA ++ E P V L N Y + G K+RD + + G++KE G+SW+
Sbjct: 610 MERGQLVADRIMELQPASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWI 668
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 231/471 (49%), Gaps = 17/471 (3%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARIL 60
F LH L +S SL + +H +A+A F L+ Y AR L
Sbjct: 15 FYLHHL-----RSCASLPQAAAVHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRL 69
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSD 119
D+ P+R+ +N +I AY+ A + ++ F + R ++K D FTYA ACS
Sbjct: 70 LDEMPRRNAVSFNLLIDAYSRAGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGR 129
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L + VH A++ GL S++LV+ Y++ + EA +VFD + D V NS++SG
Sbjct: 130 LKEGKVVHALAVLEGLAEGVFVSNSLVSMYARCGDMGEARRVFDVTEERDDVSWNSLVSG 189
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL--WEPSLLSVGQGIHGFCLKSSFD 237
+ G ++ L++F M R + + L +I + S+ + + +HG +K+ D
Sbjct: 190 YLRVGAHEEMLRVFALMRRCAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLD 249
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ------QGDYGKAL 291
+ +++S +V MYA+ ++ A +F S+ P++V ++A+I G + + +AL
Sbjct: 250 TDLFLASAMVDMYAKRGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREAL 309
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
+ +L +G + +SV+ A + ++ G IHG V++H F+ + SAL+D+Y
Sbjct: 310 SLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLY 369
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+ G + F ++ +++++T+ ++I G + +A F +++ GL PD T S
Sbjct: 370 FNSACMEDGFRCFRSVPKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTIS 429
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+++ AC +V G ++ T+ G T + + +GN+E A
Sbjct: 430 SVMNACASLAVVRTGEQMQCFATKS-GFDRFTAMGNSCIHMYARSGNVEAA 479
>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
Length = 844
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 174/527 (33%), Positives = 278/527 (52%), Gaps = 23/527 (4%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H L K + D + A L+ LY+ + +ARILFD+ P R + WN++I Y +
Sbjct: 104 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 163
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A +L N LR D+ T + AC+E D +H +I GL +
Sbjct: 164 NAKEALTL-SNGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESE----- 214
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-T 202
L+ + KVFD + DL+ NS+I + +++ LF M RL +
Sbjct: 215 ----------LLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEM-RLSRIQ 263
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVLVSMYARCNCMNSAYH 261
PD TL+ L S L + + + + GF L+ + D + + +V MYA+ ++SA
Sbjct: 264 PDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARA 323
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSA 320
VFN L + D+++W+ +I+GY+Q G +A+ + + +G+ A+ SVL A +++
Sbjct: 324 VFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAG 383
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G +HG ++++G L V V ++L DMY KCG L + +F + N + +N++I
Sbjct: 384 ALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIA 443
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G HG +A F++++++G+ PD TF LL AC H GLV++G+ F M +YGI
Sbjct: 444 CHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGIT 503
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+HY MV + G AG LE A FI S+ D ++ GALLS C ++GN DL +I +
Sbjct: 504 PSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEH 563
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
LFE +P Y V+LSN YA G+W+ V ++R GLRK G S
Sbjct: 564 LFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWS 610
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/474 (22%), Positives = 222/474 (46%), Gaps = 33/474 (6%)
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFK-NLLRTQLKPDNFTYACITRACSENSD 119
FD R V+ WN +I Y A ++ F +L + L PD T+ + +AC D
Sbjct: 42 FDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID 101
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
G + +H A+ G D +++L+ YS+ + A +FD + D+ N+MISG
Sbjct: 102 --GNK-IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISG 158
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G ++L L + + + D T+V L+S E + G IH + +K +S
Sbjct: 159 YCQSGNAKEALTLSNGL----RAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLES- 213
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ VF+ ++ DL++W+++I Y +A+ F+++ +
Sbjct: 214 --------------ELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRL 259
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLG 358
+ D + + S+ + ++ ++ + G+ ++ G+ L + + +A+V MY+K G +
Sbjct: 260 SRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVD 319
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCAC 417
VF + ++I++N++I G +GF +A E + + E+G + ++ T+ ++L AC
Sbjct: 320 SARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPAC 379
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
G + G ++ R+ + G+ + + G G LE+A S + +P+ V+
Sbjct: 380 SQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR-VNSVP 437
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFEN--DPRKGAYKVMLS----NTYAEDGRW 525
L++C +G+ + A ++ ++ + P + +LS + ++G+W
Sbjct: 438 WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQW 491
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 35/281 (12%)
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD-WMLR 198
I + V+ + LS + FD + + D+ N MISG+ G + ++ F +ML
Sbjct: 20 ICNQPNVSTHVSLSPNKSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLS 79
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSV------GQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
G TPD T PS+L G IH LK F YV++ L+ +Y+R
Sbjct: 80 SGLTPDYRTF---------PSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSR 130
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ +A +F+ + D+ +W+A+I+GY Q G+ +AL L + D V + S+
Sbjct: 131 YKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL----RAMDSVTVVSL 186
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+A ++ + G IH Y I+HG E S L D +VF+ M R++
Sbjct: 187 LSACTEAGDFNRGVTIHSYSIKHGLE-----SELLRDCQ----------KVFDRMYVRDL 231
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
I++NS+I L+ +A F+++ + PD T +L
Sbjct: 232 ISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISL 272
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 49/109 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L + +LH + K L D F T L +Y L A LF + P+ +
Sbjct: 375 VLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVN 434
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
WN++I + A LFK +L +KPD+ T+ + ACS +
Sbjct: 435 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHS 483
>gi|356553819|ref|XP_003545249.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Glycine max]
Length = 608
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 173/542 (31%), Positives = 279/542 (51%), Gaps = 5/542 (0%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L+K S +++HA + S + P L + L N ++ + P + +
Sbjct: 24 LAKQCSSSKTLQQVHAQMVVKSSIHSPNNHL-LSKAIHLKNFTYASLLFSHIAPHPNDYA 82
Query: 72 WNSIIRAYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
+N +IRA H + A +LF ++ L P+NFT+ +C+ + L R H
Sbjct: 83 FNIMIRALTTTWHHYPLALTLFHRMMSLSLSPNNFTFPFFFLSCANLAVLSPARAAHSLV 142
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
L D T+ +L+T YS+ + A KVFD + DLV NSMI+G+A G +++
Sbjct: 143 FKLALHSDPHTTHSLITMYSRCGRVAFARKVFDEIPRRDLVSWNSMIAGYAKAGCAREAV 202
Query: 191 QLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
++F M R G PDE +LV ++ E L +G+ + GF ++ Y+ S L+SM
Sbjct: 203 EVFGEMGRRDGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMTLNSYIGSALISM 262
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C + SA +F+ + D++TW+A+I+GY+Q G +A+ F + + + +
Sbjct: 263 YAKCGDLGSARRIFDGMAARDVITWNAVISGYAQNGMADEAISLFHAMKEDCVTENKITL 322
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+VL+A A + G I Y Q GF+ + V++AL+DMY+KCG L +VF+ M +
Sbjct: 323 TAVLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQ 382
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEK--GLNPDESTFSALLCACCHGGLVNDGR 427
+N ++N++I L HG +A F+ + ++ G P++ TF LL AC H GLVN+G
Sbjct: 383 KNEASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSACVHAGLVNEGY 442
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
+F M+ +G+ K EHY MV LL AG+L EA+ I +P+ D GALL C
Sbjct: 443 RLFDMMSTLFGLVPKIEHYSCMVDLLARAGHLYEAWDLIEKMPEKPDKVTLGALLGACRS 502
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
N D+ E V + E DP ++ S YA W+D ++R + G+ K G S
Sbjct: 503 KKNVDIGERVIRMILEVDPSNSGNYIISSKIYANLNMWEDSARMRLLMRQKGITKTPGCS 562
Query: 548 WV 549
W+
Sbjct: 563 WI 564
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 45/226 (19%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + +L K++ ++ D F AT L+ +YA L SA+ +F + PQ++
Sbjct: 325 VLSACATIGALDLGKQIDEYASQRGFQHDIFVATALIDMYAKCGSLASAQRVFKEMPQKN 384
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRT--QLKPDNFTYACITRACSENSDLPGLRFV 126
WN++I A A + +A SLF+ + +P++ T+ + AC V
Sbjct: 385 EASWNAMISALASHGKAKEALSLFQCMSDEGGGARPNDITFVGLLSAC-----------V 433
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-----PDLVLCNSMISGFA 181
H G L++E ++FD +S P + + M+ A
Sbjct: 434 HAG------------------------LVNEGYRLFDMMSTLFGLVPKIEHYSCMVDLLA 469
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
G + +D + ++ + PD+ TL L+ + +G+ +
Sbjct: 470 RAGHL---YEAWDLIEKMPEKPDKVTLGALLGACRSKKNVDIGERV 512
>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
Length = 666
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/542 (28%), Positives = 276/542 (50%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L L+ + S+S + LH K + F + LV +Y + I+F + P R
Sbjct: 73 LALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVFKEMPLR 132
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W +II A +A + F ++ ++ D +T++ +AC+++ L R +H
Sbjct: 133 NVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSALKACADSGALNYGREIH 192
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ G S ++ L T Y+K +D +++F+ ++ D+V ++I G +
Sbjct: 193 CQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMSNVQIGQEE 252
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ F M +P+E+T +ISG + G+ +H ++ V++ ++
Sbjct: 253 NAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVANSIM 312
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MY++C ++ A VF L D+++WS +I+GY+Q G +A Y + +G + +
Sbjct: 313 AMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGPRPNEF 372
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
ASVL+ A + G +H +V+ G E + MV SAL++MYSKCG + ++F+
Sbjct: 373 AFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQSALINMYSKCGSIKEASKIFDEA 432
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
NI+++ ++I G HG++ +A + F+ + + GL PD TF A+L AC H GLV+ G
Sbjct: 433 EYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSHAGLVDLGF 492
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F +++ + I +HY M+ LL AG L +A S I S+P D V LL C I
Sbjct: 493 HYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAESMIQSMPFQRDDVVWSTLLRACRI 552
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+G+ D + A ++ + DP + L+N YA G+W + ++R + G+ KE G S
Sbjct: 553 HGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKGKWKEAAEVRKMMKSKGVVKEPGWS 612
Query: 548 WV 549
W+
Sbjct: 613 WI 614
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 206/422 (48%), Gaps = 10/422 (2%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKP 102
LV+ LNN AR LFDK QR W +II Y +A SLF + + L
Sbjct: 11 LVKTGHLNN----ARQLFDKMLQRDEISWTTIISGYVNGMNTTEALSLFSKMWVEPGLHM 66
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D F + +AC N + +HG ++ + SALV Y K+ +DE VF
Sbjct: 67 DPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIGKVDEGCIVF 126
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD--WMLRLGKTPDEYTLVGLISGLWEPSL 220
+ ++V ++I+G G+ ++L F W+ ++G D YT + +
Sbjct: 127 KEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVG--CDTYTFSSALKACADSGA 184
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L+ G+ IH LK F + +V++ L +MY +C ++ +F S+ D+V+W+ +I
Sbjct: 185 LNYGREIHCQTLKKGFTAVSFVANTLATMYNKCGKLDYGLRLFESMTQRDVVSWTTIIMS 244
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Q G A+ FR++ + A+V++ A + G +H +VI+ G S
Sbjct: 245 NVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDS 304
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ V+++++ MYSKC L L VF+ +S R+II+++++I G G +AF++ +
Sbjct: 305 LSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQGGCGEEAFDYLSWMRR 364
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+G P+E F+++L C + ++ G+++ + G++ T ++ + G+++
Sbjct: 365 EGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVL-CVGLEQNTMVQSALINMYSKCGSIK 423
Query: 461 EA 462
EA
Sbjct: 424 EA 425
>gi|307136370|gb|ADN34182.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
melo]
Length = 1131
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/529 (31%), Positives = 271/529 (51%), Gaps = 4/529 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH ++ K + F A LV +YA + L AR F+ WN+II Y
Sbjct: 431 QLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEE 490
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
++A +F+ ++ + PD + A I AC+ + + H + GL + S
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGS 550
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+ Y K ++ A VF + ++V N++I+G+ ++++ LF + +G P
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHL-EEAIHLFQEIQMVGLKP 609
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-DSYDYVSSVLVSMYARCNCMNSAYHV 262
E T GL+ G +L++G+ IHG +K F S + V L+ MY + +
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETL 669
Query: 263 FNSLFHPD-LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F+ L +P LV W+ALI+GY+QQ + KAL +++ + D ASVL A A ++
Sbjct: 670 FSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSS 729
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN-IITYNSVIL 380
+ G +H + GF + + S+L+DMY+KCG + +QVF M RN +I++NS+I+
Sbjct: 730 LQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRNSVISWNSMIV 789
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
GL +G+ +A E F+ + ++ + PDE TF +L AC H G V++GR++F M Y +Q
Sbjct: 790 GLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNNYKLQ 849
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+ +H MV +LG G L EA FI L DP + LL C +G+ + A++
Sbjct: 850 PRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKRAANK 909
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L E P+ + V+LS YAE W LR ++ G++K G SW+
Sbjct: 910 LMELKPQSSSSYVLLSGLYAESENWSGADSLRREMKLKGVKKLPGYSWI 958
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 127/408 (31%), Positives = 203/408 (49%), Gaps = 2/408 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D ++ Y L AR LF + P +V WN +I +A +A S F L
Sbjct: 242 DQIALVTVINAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+T LK + + A + S L VH AI GL + SALV Y+K S +D
Sbjct: 302 KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMD 361
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +VF+ + + ++VL N+M+ GFA G + ++ F +M R G PDE+T + S
Sbjct: 362 AAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACA 421
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
L G +H +K+ F S +V++ LV MYA+ + A F + D V+W+A
Sbjct: 422 SLHYLDFGGQLHTVMIKNKFTSNLFVANALVDMYAKSGALKEARKQFEFMKIHDNVSWNA 481
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I GY Q+ +A + FR++ G D V +AS+++A A G H +++ G
Sbjct: 482 IIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVKEFKQGQQCHCLLVKVG 541
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ S S+L+DMY KCG + VF +M RN+++ N++I G + +A F+
Sbjct: 542 LDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPYRNVVSINALIAGYTMSHLE-EAIHLFQ 600
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+I GL P E TF+ LL C ++N GR+I ++ ++G + +E
Sbjct: 601 EIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM-KWGFLSSSE 647
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 201/419 (47%), Gaps = 35/419 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+LS K +H+ K + +V LY + A+ F + ++ VF WNS++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y F F + ++P+ FT+A + ACS D+ + VH G G G
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFG 174
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S L+ Y+K + +A VFDG + D V ++I+G+ GF +++++FD M
Sbjct: 175 FRSFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKM 234
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R+G PD+ LV +I+ Y +
Sbjct: 235 QRVGHVPDQIALVTVINA-----------------------------------YVALGRL 259
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F + +P++V W+ +I+G++++G +A+ +F +L G KA + SVL+A
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + + G+++H I+ G + +V V SALV+MY+KC + QVF ++ ERNI+ +N
Sbjct: 320 ASLSMLNYGSMVHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWN 379
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+++ G +G + EFF + G PDE TF+++ AC ++ G ++ T M +
Sbjct: 380 AMLGGFAQNGLAQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIK 438
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 197/409 (48%), Gaps = 3/409 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K L + + + LV +YA + + +A+ +F+ +R++ LWN+++ +A
Sbjct: 331 VHAQAIKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL 390
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ F + R +PD FT+ I AC+ L +H I + + ++A
Sbjct: 391 AQEVMEFFSYMKRHGPQPDEFTFTSIFSACASLHYLDFGGQLHTVMIKNKFTSNLFVANA 450
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K + EA K F+ + D V N++I G+ + D++ +F M+ G PD
Sbjct: 451 LVDMYAKSGALKEARKQFEFMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
E +L ++S GQ H +K D+ S L+ MY +C + +A VF
Sbjct: 511 EVSLASIVSACANVKEFKQGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S+ + ++V+ +ALI GY+ +A++ F+++ M G K V A +L + +
Sbjct: 571 SMPYRNVVSINALIAGYTMS-HLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629
Query: 325 GAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGL 382
G IHG V++ GF S MV +L+ MY +F E + ++ + ++I G
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCMYMNSQRFADSETLFSELQYPKGLVVWTALISGY 689
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+A +F++ + + PD++TF+++L AC + G+E+ +
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQATFASVLRACAGMSSLQTGQEVHS 738
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 5/251 (1%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
LS + IH LK + +V+V +Y +C ++ A F+ L D+ W+++++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y G + + F + G + + A VL+A + ++ G +H V + GF
Sbjct: 117 YLDHGLFATVVQSFVCMWNHGVRPNEFTFAMVLSACSGLQDINYGKQVHCGVFKMGFGFR 176
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
L+DMY+KC L VF+ + +++ ++I G GF +A + F +
Sbjct: 177 SFCQGGLIDMYAKCRNLRDARLVFDGALNLDTVSWTTLIAGYVRDGFPMEAVKVFDKMQR 236
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G PD+ ++ A G + D R++FT++ + + M+ G E
Sbjct: 237 VGHVPDQIALVTVINAYVALGRLADARKLFTQIPNPNVVA-----WNVMISGHAKRGFAE 291
Query: 461 EAYSFIWSLPK 471
EA SF L K
Sbjct: 292 EAISFFLELKK 302
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR- 67
VL SL +E+H+L+ D + L+ +YA + + +F + P+R
Sbjct: 720 VLRACAGMSSLQTGQEVHSLIFHTGFNMDEITCSSLIDMYAKCGDVKGSLQVFHEMPRRN 779
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
SV WNS+I A +A +FK + + + PD T+ + ACS
Sbjct: 780 SVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACS 827
>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
Length = 820
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 271/536 (50%), Gaps = 3/536 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ--RSVFLWNS 74
+SL ++H + + PF L+ LYA L A +LF T +++ W S
Sbjct: 156 RSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHFKTIVTWTS 215
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I + + A SLF + + P+ FT++ I A + + + +H G
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ +ALV Y+K + + A++VFD + + +LV NSMI GF H +D+++ +F
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDRAVGVFK 335
Query: 195 WMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
+LR P+E ++ ++S L+ G+ +HG +K YV + L+ MY +C
Sbjct: 336 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMNSLMDMYFKC 395
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ +F + D+VTW+ L+ G+ Q + +A YF + +G D ++VL
Sbjct: 396 RFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVL 455
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
++A A + G IH +I+ G+ ++ + +L+ MY+KCG L QVFE + + N+I
Sbjct: 456 HSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVI 515
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++ ++I LHG Q E F ++ +G+ P TF +L AC H G V +G F M
Sbjct: 516 SWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSM 575
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+ + + EHY MV LLG AG L+EA FI S+P P+V GALL C YGN +
Sbjct: 576 KKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKM 635
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +LFE +P V+L+N GR ++ ++R + NG+RKE G SW+
Sbjct: 636 GREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWI 691
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/456 (24%), Positives = 199/456 (43%), Gaps = 38/456 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S + + ++LH+L+ K + F T LV +YA + SA +FD+ P+R+
Sbjct: 251 ILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPERN 310
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVH 127
+ WNS+I + + ++ A +FK++LR + + P+ + + + AC+ L R VH
Sbjct: 311 LVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVH 370
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + GL + ++L+ Y K DE +K+F V D D+V N ++ GF ++
Sbjct: 371 GVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFE 430
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++ F M R G PDE + ++ + L G IH +K + + L+
Sbjct: 431 EACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLI 490
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+C + AY VF + ++++W+A+I+ Y G + + F + +G + V
Sbjct: 491 TMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHV 550
Query: 308 LIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
VL+A + + V G A + H + +VD+ + G+L + E+
Sbjct: 551 TFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIES 610
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M + P S + ALL AC G + G
Sbjct: 611 MP----------------------------------MKPTPSVWGALLGACRKYGNLKMG 636
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
RE R+ E Y+ + + +G LEEA
Sbjct: 637 REAAERLFEMEPYNPGN--YVLLANMCTRSGRLEEA 670
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 3/162 (1%)
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-- 369
+L A ++ ++ IH +I + + + + L+++Y+KCG L + +F
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ I+T+ S+I L QA F + G P++ TFS++L A +V G+++
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ + ++G A +V + ++ A +P+
Sbjct: 268 HS-LIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQMPE 308
>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g06540-like [Vitis vinifera]
Length = 623
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/468 (32%), Positives = 249/468 (53%), Gaps = 35/468 (7%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSAL----VTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
SDL L+ +H I + + D +S L V S SLID A ++F + +P+L +
Sbjct: 28 SDLTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIF 87
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+MI G + D++ + R G PD T L+ + +S+G HG +K
Sbjct: 88 NAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIK 147
Query: 234 SSFDSYDYVSSVLVSMYA-------------------------------RCNCMNSAYHV 262
F+ YV + LV MYA +C + SA +
Sbjct: 148 HGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKL 207
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + +LVTWS +I+GY+Q + KA+ F+ L QG +A+ ++ SV+++ A +
Sbjct: 208 FDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGAL 267
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G H YV+++G L++++ +ALVDMY++CG + + VFE + ER+ +++ ++I GL
Sbjct: 268 ELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGL 327
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+HG++ ++ ++F ++E GL P + TF+A+L AC HGGLV G +IF M ++ ++ +
Sbjct: 328 AMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPR 387
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV LLG AG LEEA F+ +P + V GALL C I+ N+++ E V L
Sbjct: 388 LEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKNAEIGERVGKILI 447
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ P+ Y V+LSN YA W+ V ++R + GL+K G S +
Sbjct: 448 QLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPGHSLIE 495
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/483 (23%), Positives = 208/483 (43%), Gaps = 83/483 (17%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRL----YALNNVLPSARILFDKTPQRSVFLWNS 74
L+ K +HA + + ++ D F A++L+ + +++ A +F + ++F++N+
Sbjct: 30 LTHLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNPNLFIFNA 89
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+IR ++ + + A + R L PDN T+ + ++C++ + HG I G
Sbjct: 90 MIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHG 149
Query: 135 LGRDSITSSALVTAYS-------------------------------KLSLIDEAIKVFD 163
+D ++LV Y+ K ++ A K+FD
Sbjct: 150 FEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFD 209
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ + +LV ++MISG+A +DK+++LF + G +E +V +IS L +
Sbjct: 210 QMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALEL 269
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ H + +K+ + + LV MYARC ++ A VF L D ++W+ALI G +
Sbjct: 270 GERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPERDTLSWTALIAGLAM 329
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G ++L YF + G + +VL+A + HG +++ GF
Sbjct: 330 HGYSERSLKYFATMVEAGLTPRDITFTAVLSACS-----------HGGLVERGF------ 372
Query: 344 SSALVDMYSKCGYLGLGIQVFETMS-----ERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
Q+FE+M E + Y ++ LG G +A F +
Sbjct: 373 ------------------QIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERF---V 411
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
++ + P+ + ALL AC ++ EI R+ + IQ +H Y V L + N
Sbjct: 412 LKMPVKPNAPVWGALLGAC----RIHKNAEIGERVGKIL-IQLLPQHSGYYVLLSNIYAN 466
Query: 459 LEE 461
+E
Sbjct: 467 AKE 469
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 32/249 (12%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
FLV +K H +S + H + K +D + LV +YA +A ++F +
Sbjct: 124 FLVKSCTKLH-CISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYY 182
Query: 67 RSVFLWNSIIR-------------------------------AYALAHRFNDAKSLFKNL 95
V W S+IR YA + F+ A LFK L
Sbjct: 183 VDVVSWTSMIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVL 242
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
++ + + +C+ L H + +G+ + I +ALV Y++ I
Sbjct: 243 QSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSI 302
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+A+ VF+ + + D + ++I+G A G+ ++SL+ F M+ G TP + T ++S
Sbjct: 303 DKAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSAC 362
Query: 216 WEPSLLSVG 224
L+ G
Sbjct: 363 SHGGLVERG 371
>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 574
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 147/444 (33%), Positives = 244/444 (54%), Gaps = 1/444 (0%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
YA + ++C + + +H G+ + + ++ LV Y + + A +FD +S
Sbjct: 4 YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+L L N MI G+A G ++ ++ L+ M G PD++T ++ S + G+
Sbjct: 64 KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IH ++S +S +V + L+ MYA+C C+ SA VF+ + D+V W++++ YSQ G
Sbjct: 124 IHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQ 183
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
++L R + G K +AA+A + + G +HGY +HGFE + V +A
Sbjct: 184 PDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTA 243
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+DMY+K G + + +FE + E+ ++++N++I G +HG +A + F+++ K L PD
Sbjct: 244 LMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGKVL-PD 302
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
TF +L AC HGGL+N+G+ F M ++ I +HY M+ LLG G LEEAY I
Sbjct: 303 HITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLI 362
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
+ D V GALL C I+GN ++ E+ +L E +P G V+LSN YA+ G+WD
Sbjct: 363 MEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAGKWD 422
Query: 527 DVMKLRDDIVDNGLRKEAGVSWVS 550
V +LRD +++ GL+K SW+
Sbjct: 423 GVARLRDLMMNKGLKKSIACSWIE 446
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/395 (30%), Positives = 204/395 (51%), Gaps = 9/395 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++ K+LHA + + + +P ATKLV LY + N L +A +LFD+ +R++FLWN +I
Sbjct: 15 KAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRISKRNLFLWNVMI 74
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R YA + A SL+ + L PD FT+ + +ACS S + + +H I SGL
Sbjct: 75 RGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLE 134
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +AL+ Y+K ++ A +VFD + + D+V NSM++ ++ G D+SL L M
Sbjct: 135 SDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQNGQPDESLALCRVM 194
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G P E T V I+ + LL G+ +HG+ + F+S D V + L+ MYA+ +
Sbjct: 195 AFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKVKTALMDMYAKSGSV 254
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK-ADPVLIASVLAA 315
N A +F L +V+W+A+ITGY+ G +AL F++ M+GK D + VLAA
Sbjct: 255 NVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKE--MKGKVLPDHITFVGVLAA 312
Query: 316 AAKSANVWPGAVIHGYVIQHGFEL--SVMVSSALVDMYSKCGYLGLGIQ-VFETMSERNI 372
+ + G +H + F + +V + ++D+ CG L + + E E +
Sbjct: 313 CSHGGLLNEGK-MHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAYKLIMEMRVEPDA 371
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+ +++ +HG ++E L PD+
Sbjct: 372 GVWGALLHSCKIHGNVEMGELALEKLVE--LEPDD 404
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 171/369 (46%), Gaps = 25/369 (6%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ + ++ K++H V ++ L D F L+ +YA + SAR +FDK +R
Sbjct: 107 FVLKACSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDER 166
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V WNS++ Y+ + +++ +L + + LKP T+ A ++N LP + +H
Sbjct: 167 DVVCWNSMLATYSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELH 226
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + G + +AL+ Y+K ++ A +F+ + + +V N+MI+G+A G +
Sbjct: 227 GYSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHAN 286
Query: 188 KSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--S 244
++L LF M GK PD T VG+++ LL+ G+ +H + S F+ + V +
Sbjct: 287 EALDLFKEM--KGKVLPDHITFVGVLAACSHGGLLNEGK-MHFRSMISDFNIWPTVQHYT 343
Query: 245 VLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLN--MQG 301
++ + C + AY + + PD W AL+ G+ KL
Sbjct: 344 CMIDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPD 403
Query: 302 KKADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ V+++++ A A K W G A + ++ G + S+ C ++ +G
Sbjct: 404 DGGNYVILSNMYAQAGK----WDGVARLRDLMMNKGLKKSI-----------ACSWIEVG 448
Query: 361 IQVFETMSE 369
+V +SE
Sbjct: 449 NKVHAFLSE 457
>gi|15218851|ref|NP_171853.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180299|sp|Q9LR69.1|PPR8_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g03540
gi|9280645|gb|AAF86514.1|AC002560_7 F21B7.16 [Arabidopsis thaliana]
gi|91805735|gb|ABE65596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189463|gb|AEE27584.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 609
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 270/529 (51%), Gaps = 7/529 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ HA V K+ L D L+ LY L + R +FD + W S++ Y
Sbjct: 82 QFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTG 141
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A +F ++ L + FT + +ACSE ++ R HG I G + S
Sbjct: 142 KEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFIS 201
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGK 201
S L Y +A +VFD + +PD++ +++S F+ ++++L LF M R G
Sbjct: 202 STLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGL 261
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD T +++ L G+ IHG + + S V S L+ MY +C + A
Sbjct: 262 VPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQ 321
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VFN + + V+WSAL+ GY Q G++ KA+ FR++ ++ D +VL A A A
Sbjct: 322 VFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREM----EEKDLYCFGTVLKACAGLAA 377
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G IHG ++ G +V+V SAL+D+Y K G + +V+ MS RN+IT+N+++
Sbjct: 378 VRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSA 437
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
L +G +A FF D+++KG+ PD +F A+L AC H G+V++GR F M + YGI+
Sbjct: 438 LAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKP 497
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN-SDLAEIVAHQ 500
TEHY M+ LLG AG EEA + + D ++ G LL C + S +AE +A +
Sbjct: 498 GTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKR 557
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ E +P+ V+LSN Y GR D + +R +V G+ K G SW+
Sbjct: 558 MMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWI 606
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H + + + L+ LY + + SA ++ K R++ WN+++ A A
Sbjct: 382 KEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQN 441
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
R +A S F ++++ +KPD ++ I AC
Sbjct: 442 GRGEEAVSFFNDMVKKGIKPDYISFIAILTAC 473
>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
mitochondrial [Vitis vinifera]
gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 168/542 (30%), Positives = 280/542 (51%), Gaps = 5/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L + ++L+ +L+A + +L R + + Y L A F+ +
Sbjct: 18 LLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFEN 77
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+I+ +++ F D LFK +L+ D+F +AC S G + H
Sbjct: 78 LHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHS 137
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI L D + AL+ Y++L ++EA KVF+ V + V+ MI G H F ++
Sbjct: 138 LAIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKG--HLNFSEE 195
Query: 189 --SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-DSYDYVSSV 245
+LF M R G D + + GLI G+ HG C+K +F DS ++ +
Sbjct: 196 FGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTS 255
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MY +C ++ A +F + + D+V WSA+I G+++ G +++ FR++ +
Sbjct: 256 LVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPN 315
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V AS++ A + ++ G +HGY+I++G EL V ++ +DMY+KCG + +VF
Sbjct: 316 SVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFC 375
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ E+N+ +++++I G G+HG +A F ++ P+ TF ++L AC H G + +
Sbjct: 376 QIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSVTFVSVLSACSHSGRIEE 435
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G F M+ +YGI EHY MV LLG AG ++EA SFI ++P + GALL C
Sbjct: 436 GWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINNMPTEPGASAWGALLGAC 495
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+ ++LAE VA +L + + VMLSN YA+ G W+ V K R + + G+ K G
Sbjct: 496 RIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMVKKTRLKMCEKGIHKIVG 555
Query: 546 VS 547
+
Sbjct: 556 FT 557
>gi|224112156|ref|XP_002316102.1| predicted protein [Populus trichocarpa]
gi|222865142|gb|EEF02273.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 163/541 (30%), Positives = 281/541 (51%), Gaps = 5/541 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ ++ +++H + K D F T LV +YA + +R +FD+ R+
Sbjct: 109 VLKACSESRNFDEGRKVHCQIVKFGN-PDSFVFTGLVDMYAKCGEIECSRSVFDENLDRN 167
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
VF W+S+I Y + D LF + ++ + T + AC + L +++HG
Sbjct: 168 VFSWSSMIAGYVQNNLAQDGLVLFNRMREELIEANQITLGILVHACKKLGALHQGKWLHG 227
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G+ S +AL+ Y+K ++ +A VFD + D+V +MI G+ G ++
Sbjct: 228 YLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGIDIVSWTAMIVGYTQNGCPEE 287
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLV 247
+L+LF ++ P++ T+ + S + L++G+ IHG +K S D V++ LV
Sbjct: 288 ALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIHGLSIK--LGSRDPIVTNSLV 345
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
YA+C A +VF ++ D+V W+++I+ +SQ G +AL F ++ M D V
Sbjct: 346 DFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAYEALELFHQMRMGSVLPDAV 405
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVFET 366
+ SVL+A A + G+ H Y ++ G S V V +AL+ Y+KCG +F+
Sbjct: 406 TLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTALLTFYAKCGDAESARVIFDG 465
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M +++ +T++++I G G+ G + F D+++ L P+E F+++L AC H G++ +G
Sbjct: 466 MDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPNEEIFTSILSACSHTGMIGEG 525
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+FT + ++Y + T+HY MV LL AG L+EA FI +P D ++ GA L C
Sbjct: 526 WRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFIQKMPVQPDVSLFGAFLHGCG 585
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++ DL E+ ++ E P Y V++ N YA D RW V ++R+ + GL K G
Sbjct: 586 LHSRFDLGELAIKRMLELHPGDACYYVLMCNLYASDARWSKVKQVRELMKQRGLMKTPGC 645
Query: 547 S 547
S
Sbjct: 646 S 646
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/395 (32%), Positives = 199/395 (50%), Gaps = 4/395 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA + L RD +TKLV LY L AR++FD P W IIR Y L
Sbjct: 23 EMHAYLVVQGLTRDLSCSTKLVSLYGSFGRLDLARLVFDTIPHPDFLSWKVIIRWYFLNS 82
Query: 84 RFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F D F N +R LK DN ++ + +ACSE+ + R VH + G DS
Sbjct: 83 EFRDIVG-FYNRMRVCLKECDNVVFSHVLKACSESRNFDEGRKVHCQIVKFG-NPDSFVF 140
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ LV Y+K I+ + VFD D ++ +SMI+G+ L LF+ M
Sbjct: 141 TGLVDMYAKCGEIECSRSVFDENLDRNVFSWSSMIAGYVQNNLAQDGLVLFNRMREELIE 200
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
++ TL L+ + L G+ +HG+ +K + Y+ + L+ +YA+C + A V
Sbjct: 201 ANQITLGILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSV 260
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ L D+V+W+A+I GY+Q G +AL F + + V IASV ++ ++ N+
Sbjct: 261 FDELHGIDIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNL 320
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IHG I+ G +V+++LVD Y+KC VFET+S+R+++ +NS+I
Sbjct: 321 NLGRSIHGLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAF 379
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+G Y+A E F + + PD T ++L AC
Sbjct: 380 SQNGSAYEALELFHQMRMGSVLPDAVTLVSVLSAC 414
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 203/412 (49%), Gaps = 8/412 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+++ K +L + K LH + K + + T L+ LYA V+ AR +FD+
Sbjct: 208 ILVHACKKLGALHQGKWLHGYLIKCGIELGSYLVTALLDLYAKCGVVRDARSVFDELHGI 267
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W ++I Y +A LF + + P++ T A + +CS+ +L R +H
Sbjct: 268 DIVSWTAMIVGYTQNGCPEEALKLFLQKEQVAVLPNDVTIASVFSSCSQLLNLNLGRSIH 327
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G +I G RD I +++LV Y+K + +A VF+ +SD D+V NS+IS F+ G
Sbjct: 328 GLSIKLG-SRDPIVTNSLVDFYAKCQMNRDARYVFETISDRDVVAWNSIISAFSQNGSAY 386
Query: 188 KSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSV 245
++L+LF M R+G PD TLV ++S + L VG H + +K S + YV +
Sbjct: 387 EALELFHQM-RMGSVLPDAVTLVSVLSACASLNALQVGSSFHAYAVKRGLLSSNVYVGTA 445
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L++ YA+C SA +F+ + VTWSA+I+GY QG+ +L F + K +
Sbjct: 446 LLTFYAKCGDAESARVIFDGMDQKSTVTWSAMISGYGIQGNGRGSLSIFGDMLKAELKPN 505
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ S+L+A + + + G + + Q + S + +VD+ ++ G L +
Sbjct: 506 EEIFTSILSACSHTGMIGEGWRLFTMICQDYNLVPSTKHYTCMVDLLARAGRLKEALDFI 565
Query: 365 ETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ M + ++ + + + G GLH + ++E L+P ++ + L+C
Sbjct: 566 QKMPVQPDVSLFGAFLHGCGLHSRFDLGELAIKRMLE--LHPGDACYYVLMC 615
>gi|334184142|ref|NP_178563.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334302883|sp|Q9SJ73.3|PP148_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g04860
gi|330250783|gb|AEC05877.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 692
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 277/532 (52%), Gaps = 7/532 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+S+ + +H + AK+ L D L+ Y+ L SA +LF + +S WN++I A
Sbjct: 167 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 226
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+ + +A ++FKN+ ++ T + A + L H + G+ D
Sbjct: 227 YSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVND 280
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++LV AYS+ + A +++ +V S++S +A G D ++ F +
Sbjct: 281 ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQ 340
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
L D LVG++ G + S + +G +HG+ +KS + V + L++MY++ + + +
Sbjct: 341 LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 400
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK-ADPVLIASVLAAAA 317
+F L L++W+++I+G Q G A F ++ + G D + IAS+LA +
Sbjct: 401 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 460
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G +HGY +++ FE V +AL+DMY+KCG VF+++ T+NS
Sbjct: 461 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 520
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G L G ++A + ++ EKGL PDE TF +L AC HGG V++G+ F M +E+
Sbjct: 521 MISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEF 580
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI +HY MV LLG A EA IW + D AV GALLS C I+ ++ E V
Sbjct: 581 GISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYV 640
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++F D + G V++SN YA + WDDV+++R+ + DNG GVS +
Sbjct: 641 ARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 127/459 (27%), Positives = 218/459 (47%), Gaps = 20/459 (4%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ +++ + K+ L R + T L+ LY + SA++LFD+ P+R +WN++I Y+
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYS 127
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
DA LF +L+ P T + C + + R VHG A SGL DS
Sbjct: 128 RNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQ 187
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+AL++ YSK + + A +F + D V N+MI ++ G ++++ +F M
Sbjct: 188 VKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKN 247
Query: 201 KTPDEYTLVGLISG--LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
T++ L+S EP +H +K + V + LV Y+RC C+ S
Sbjct: 248 VEISPVTIINLLSAHVSHEP--------LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVS 299
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A ++ S +V +++++ Y+++GD A+ YF K K D V + +L K
Sbjct: 300 AERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKK 359
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S+++ G +HGY I+ G +V + L+ MYSK + + +FE + E +I++NSV
Sbjct: 360 SSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSV 419
Query: 379 ILGLGLHGFTYQAFEFFRD-IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
I G G AFE F ++ GL PD T ++LL C +N G+E+ Y
Sbjct: 420 ISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKEL-----HGY 474
Query: 438 GIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKP 472
++ E+ + ++ + GN +A S S+ P
Sbjct: 475 TLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 513
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 171/362 (47%), Gaps = 8/362 (2%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE- 116
RI T R + ++S++++ + ++F++LLR+ L P++FT + +A +
Sbjct: 2 RITKPITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTS 61
Query: 117 -NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
NS + V SGL R ++L+ Y K + A +FD + + D V+ N+
Sbjct: 62 FNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNA 121
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
+I G++ G+ + +LF ML+ G +P TLV L+ + +S G+ +HG KS
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
+ V + L+S Y++C + SA +F + V+W+ +I YSQ G +A+ F+
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 241
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + + PV I ++L+A +H V++ G + V ++LV YS+CG
Sbjct: 242 NMFEKNVEISPVTIINLLSAHVSHEP------LHCLVVKCGMVNDISVVTSLVCAYSRCG 295
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
L +++ + + +I+ S++ G A +F + + D +L
Sbjct: 296 CLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILH 355
Query: 416 AC 417
C
Sbjct: 356 GC 357
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 14/270 (5%)
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL---WEPSLLSVGQ 225
DL +S++ H + +F +LR TP+ +T+ + + L V Q
Sbjct: 12 DLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQ 71
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
+ KS D + YV + L+++Y + C+ SA +F+ + D V W+ALI GYS+ G
Sbjct: 72 -VQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNG 130
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
A F + QG + ++L + V G +HG + G EL V +
Sbjct: 131 YECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKN 190
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
AL+ YSKC LG +F M +++ +++N++I G +A F+++ EK +
Sbjct: 191 ALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEI 250
Query: 406 DESTFSALL----------CACCHGGLVND 425
T LL C G+VND
Sbjct: 251 SPVTIINLLSAHVSHEPLHCLVVKCGMVND 280
>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 796
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 271/540 (50%), Gaps = 10/540 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +HAL + F + LV +YA + AR +FD +R WN+++
Sbjct: 130 LREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSG 189
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGL 135
Y A +D +F + R+ + ++F + + C+ SD P + VHG + +G
Sbjct: 190 YVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCA-GSDDPVMDIAAAVHGCVVKAGF 248
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH------CGFWDKS 189
D +SA+V Y+K + EA+ +F V DP++V+ N+MI+G ++
Sbjct: 249 DSDVFLASAMVGMYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREA 308
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L L+ + G P E+T +I + G+ IHG LK F D++ S L+ +
Sbjct: 309 LSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDL 368
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y CM + F S+ D+VTW+A+I+G Q + +AL F +L G K DP I
Sbjct: 369 YLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTI 428
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+SV+ A A A G I + + GF + ++ + MY++ G + ++ F+ M
Sbjct: 429 SSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQEMES 488
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+I+++++VI HG A FF ++++ + P+E TF +L AC HGGLV++G +
Sbjct: 489 HDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDEGLKY 548
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
+ M EEY + +H +V LLG AG L +A +FI +P + +LL+ C I+
Sbjct: 549 YETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASCRIHR 608
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ + ++VA ++ E P A V L N Y + G K+RD + + G++KE G+SW+
Sbjct: 609 DMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPGLSWI 668
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 215/427 (50%), Gaps = 14/427 (3%)
Query: 16 HQSLSRTKELHALVAKASLLR---DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLW 72
H S + HA A ++R P + L A + AR L D+ P+ + +
Sbjct: 22 HHLRSCSAPRHAAAVHAHIVRAHPSPSLFLRNTLLAAYCRLGGHARRLLDEMPRTNAVSF 81
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
N +I AY+ A + + F R+ ++ D FTYA ACS L + VH ++
Sbjct: 82 NLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGRLREGKAVHALSV 141
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+ G+ S++LV+ Y++ + +A +VFD + D V N+++SG+ G D L+
Sbjct: 142 LEGIAGGVFVSNSLVSMYARCGDMGQARQVFDAADERDDVSWNALVSGYVRAGAQDDMLR 201
Query: 192 LFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+F M R G + + L +I +G +P ++ + +HG +K+ FDS +++S +V
Sbjct: 202 VFAMMRRSGIGLNSFALGSVIKCCAGSDDP-VMDIAAAVHGCVVKAGFDSDVFLASAMVG 260
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ-QGDYG-----KALYYFRKLNMQGK 302
MYA+ ++ A +F S+ P++V ++A+I G + + G +AL + ++ +G
Sbjct: 261 MYAKKGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGM 320
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ +SV+ A + ++ G IHG V++H F+ + SAL+D+Y G + G +
Sbjct: 321 EPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYLNSGCMEDGFR 380
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
F ++ +++++T+ ++I G + +A F +++ GL PD T S+++ AC +
Sbjct: 381 CFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPDPFTISSVMNACASLAV 440
Query: 423 VNDGREI 429
G +I
Sbjct: 441 ARTGEQI 447
>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/440 (34%), Positives = 246/440 (55%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
I + C++ L + H ++ GL D +TS+ L+ YSK +D A +VFD +
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
LV N+MI G +++L L M R G E+T+ ++ LS Q +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
F +K++ D +V++ L+ +YA+C M A VF S+ +VTWS++ GY Q Y +
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL FRK G K D L++SV+ A A A + G ++ + + GF ++ V+S+L+D
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
MY+KCG + +VF + +RN++ +N++I GL H + + F + + GL+P++ T
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 410 FSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL 469
F ++L AC H GLV G++ F MT+E+ + HY MV L AG + EAY I L
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKL 429
Query: 470 PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P ++ G+LL+ C +GN +LAE+ A +LF+ +P ++LSN YA +G+WD+V
Sbjct: 430 PFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVA 489
Query: 530 KLRDDIVDNGLRKEAGVSWV 549
K+R + ++ ++KE G SW+
Sbjct: 490 KMRKLLKESDVKKERGKSWI 509
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 7/370 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L + K HA + L D + L+ +Y+ + AR +FD+ P RS
Sbjct: 70 ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPSRS 129
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I + N+A L + R FT + + AC+ L + +H
Sbjct: 130 LVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLHA 189
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI + + + ++AL+ Y+K L+ +A+ VF+ + D +V +SM +G+ +++
Sbjct: 190 FAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNEMYEQ 249
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF G D++ + +I + + G+ ++ KS F S +V+S L+
Sbjct: 250 ALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASSLID 309
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + +Y VF + ++V W+A+I+G S+ + + F K+ G + V
Sbjct: 310 MYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSPNDVT 369
Query: 309 IASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SVL+A V G + +H +V S +VD S+ G Q+FE
Sbjct: 370 FVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAG------QIFEAY 423
Query: 368 SERNIITYNS 377
+ + +N+
Sbjct: 424 DLISKLPFNA 433
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ +L AK + G H ++ G + ++ S+ L++MYSKCG + QVF+ M
Sbjct: 66 FVHEILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEM 125
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
R+++++N++I L +G +A + + +G E T S++LCAC
Sbjct: 126 PSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCAC 175
>gi|326524926|dbj|BAK04399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 584
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 159/536 (29%), Positives = 275/536 (51%), Gaps = 9/536 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH- 83
+HA + +P +AT+L+ A + L AR +FD P+R ++WN+++RA+A A
Sbjct: 42 IHARAVLLGVAANPAFATRLLAAAAPCS-LAYARRVFDAAPRRDAYMWNTLLRAHAHAQA 100
Query: 84 ----RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A L+K + + PD +TY + AC+ R HG A+ L D
Sbjct: 101 PAGSTAGGALQLYKRMRAAGVAPDCYTYPIVLPACAAARAPRLGRAAHGDAVRFALAEDG 160
Query: 140 ITSSALVTAYSKLSLIDEAIKVF---DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
SAL+ Y + + +A +VF V +V +M++G+A + +++ +F M
Sbjct: 161 FVHSALIAMYCQEGDVADAEQVFLAAAAVGARTVVSWTAMVAGYAQNCLFGQAVTVFGAM 220
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+E TL+ + L L+ G+ +HGF +K FD+ + + L++MY +C +
Sbjct: 221 VAQGMLPNEITLISFLPCLQGQECLAAGEMVHGFVVKLGFDANLPLVNALIAMYGKCGSI 280
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+A +F+ + +V+W+ ++ Y Q GD +A+ +F ++ + D V + SVL+A
Sbjct: 281 AAAKELFDGMAAHTVVSWNTMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLSAC 340
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ + G +H G + + + LVDMY+KCG + Q F+ + E +++++
Sbjct: 341 TRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSWS 400
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I HG +A F + ++G+ P+ T +A+L AC H GLV++G IF + +
Sbjct: 401 AMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSIVRD 460
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y I E+Y MV +LG AG L EAY I + D + GA L C ++GN +LAE
Sbjct: 461 YHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAEF 520
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
VA LF++ + V+++N Y E G +D + R + + L+K AG S V S
Sbjct: 521 VAKDLFQSGSNDVTFYVLMANMYFEAGMLEDAERTRRAMKEMELKKTAGHSLVCTS 576
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 127/294 (43%), Gaps = 10/294 (3%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
+ + L+ + +H V K + L+ +Y + +A+ LFD +V WN
Sbjct: 240 QGQECLAAGEMVHGFVVKLGFDANLPLVNALIAMYGKCGSIAAAKELFDGMAAHTVVSWN 299
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
+++ Y A F +L ++ D T + AC+ L ++VH A
Sbjct: 300 TMVAMYEQNGDGVRAIKFFHRMLSEKVGFDAVTLVSVLSACTRQGALETGKWVHELARSR 359
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL D+ + LV Y+K I A + FDG+ +P +V ++MIS +A+ G +++L LF
Sbjct: 360 GLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPGVVSWSAMISAYANHGEPEEALNLF 419
Query: 194 DWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
M G P+ +TL ++ SGL + L + + + + ++Y + +V
Sbjct: 420 SAMKDQGVKPNSFTLTAVLVACGHSGLVDEGLAIFNSIVRDYHISPTLENY----ACMVD 475
Query: 249 MYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
M R + AY + + PD W A + G G+ A + + L G
Sbjct: 476 MLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGGCRLHGNLELAEFVAKDLFQSG 529
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 73/178 (41%), Gaps = 12/178 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L K +H L L D LV +YA + AR FD +
Sbjct: 336 VLSACTRQGALETGKWVHELARSRGLDTDARIGNVLVDMYAKCGEIAYARQAFDGLREPG 395
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W+++I AYA +A +LF + +KP++FT + AC + + G
Sbjct: 396 VVSWSAMISAYANHGEPEEALNLFSAMKDQGVKPNSFTLTAVLVACGHSGLVD-----EG 450
Query: 129 GAIVSGLGRDSITSSAL------VTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISG 179
AI + + RD S L V + + EA ++ G+S PD + + + G
Sbjct: 451 LAIFNSIVRDYHISPTLENYACMVDMLGRAGRLVEAYEIIRGMSMQPDKCIWGAFLGG 508
>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial [Vitis vinifera]
Length = 875
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 169/542 (31%), Positives = 276/542 (50%), Gaps = 3/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V E SL + +H V + + + L+ +Y L SA LF+ P R
Sbjct: 207 VTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRM 266
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
W +I Y + F +A ++F + +++P+ T + AC+ + R VHG
Sbjct: 267 TAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHG 326
Query: 129 GAIVSGLGRD-SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
I + + AL+ Y+ + + KVF+ + + ++ N++IS F G +
Sbjct: 327 FVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPE 386
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++L LF M G PD Y+L +S S +G IHG+ +K+ + D+V + L+
Sbjct: 387 EALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALI 445
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MYA+C ++SA +F + LVTW+++I G+SQ G +A+ F ++ M K D +
Sbjct: 446 DMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKL 505
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
SV+ A + + G +H +I +G + +AL DMYSKCG L + VF+ M
Sbjct: 506 TFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRM 565
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
SER+I++++ +I G G+HG F ++ G+ P++ TF +L AC H G V +G+
Sbjct: 566 SERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGK 625
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M+ E+G++ K +H+ MV LL AG+L AY I SLP P + ++ GALL+ C I
Sbjct: 626 LYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRI 684
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ D+ + + L + D Y +LSN YAE+G WD K+R + GLRK G S
Sbjct: 685 HKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYS 744
Query: 548 WV 549
+
Sbjct: 745 TI 746
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 227/456 (49%), Gaps = 3/456 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ LS ++H V K D T L+ +Y + L A FD P R
Sbjct: 106 VLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRD 165
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W+SI+ + + ++ +F ++ ++PD+ T +T ACSE L R VHG
Sbjct: 166 VVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHG 225
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + ++ +++L+ Y KL + A ++F+ V MIS + G + +
Sbjct: 226 YVVRREIESNASLNNSLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQE 285
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDYVSSVLV 247
+L +F M P++ T+VG++ + G+ +HGF ++ + D D++ L+
Sbjct: 286 ALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALM 345
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+YA + + VF ++ +++W+ LI+ +++ G +AL F ++ QG D
Sbjct: 346 ELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSY 405
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+AS L+A + GA IHGY+I+ G + V +AL+DMY+KCG++ ++FE +
Sbjct: 406 SLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNALIDMYAKCGFVHSANKMFEKI 464
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E++++T+NS+I G +G++ +A F + + D+ TF +++ AC H G + G+
Sbjct: 465 KEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEKGK 524
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
+ ++ YG++ + + + G L+ A+
Sbjct: 525 WVHHKLI-MYGLRKDSYLDTALTDMYSKCGELQMAH 559
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 198/385 (51%), Gaps = 2/385 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LHA + L R P +TKL+ YA + S++ +FD P+ F+W +I+ Y
Sbjct: 19 QLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFPKPDSFMWGVLIKCYVWGG 78
Query: 84 RFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F +A SL+ ++ + Q + NF + + +ACS DL VHG I G D++
Sbjct: 79 FFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCGFESDAVVE 138
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y ++S +D+A K FD + D+V +S++ F G + L +F M+
Sbjct: 139 TSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVE 198
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T++ + E L +G+ +HG+ ++ +S +++ L+ MY + + SA +
Sbjct: 199 PDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLGDLYSAERL 258
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++ W+ +I+ Y+Q G + +AL F K+ + + V + VL A A+ V
Sbjct: 259 FENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRV 318
Query: 323 WPGAVIHGYVIQHGFELSV-MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G +HG+VI+ + + + AL+++Y+ G L +VFET+ E+ I+++N++I
Sbjct: 319 KEGRSVHGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISI 378
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPD 406
+G +A F + +GL PD
Sbjct: 379 FTRNGQPEEALLLFVQMQTQGLMPD 403
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y + R C+ ++ L L H ++GL R S+ L+ +Y+++ + + + +VFD
Sbjct: 4 YMPLFRRCATSTTLTQL---HAHLFITGLHRHPPASTKLIESYAQIGIFESSKRVFDTFP 60
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQ 225
PD + +I + GF+++++ L+ M+ +T + ++ LSVG
Sbjct: 61 KPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGG 120
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
+HG +K F+S V + L+ MY +C++ A F+++ D+V WS+++ + Q G
Sbjct: 121 KVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNG 180
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
+ L F ++ + + D V + SV A ++ ++ G +HGYV++ E + +++
Sbjct: 181 QASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNN 240
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
+L+ MY K G L ++FE + R + +I G +A F + E + P
Sbjct: 241 SLIVMYGKLGDLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEP 300
Query: 406 DESTFSALLCACCHGGLVNDGREI 429
++ T +LCAC G V +GR +
Sbjct: 301 NQVTMVGVLCACARLGRVKEGRSV 324
>gi|296088765|emb|CBI38215.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 275 bits (702), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 278/537 (51%), Gaps = 60/537 (11%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L+ + L AL A+ SL DP YA L+ A++ +TP ++ L+N+IIR
Sbjct: 70 QLTISTRLSALCAQ-SLPIDPRYALSLL-----------AQL---RTP--NLPLYNAIIR 112
Query: 78 AYALAHRFNDAKS---LFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
A ++ ND+ ++K +L + PDN+T + +AC+E+ + VHG AI G
Sbjct: 113 GLATSN--NDSIEGLVVYKQMLSKGIVPDNYTIPFVLKACAESRAVREGEEVHGQAIKMG 170
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L D S+ L+ Y+ +I A KVFD DLV +MI G+ GF
Sbjct: 171 LASDVYVSNTLMRMYAVCDVIRSARKVFDTSPQRDLVSWTTMIQGYVKMGF--------- 221
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARC 253
+G+ + +++S + D +V + LV MY +C
Sbjct: 222 ----------------------------AREGVGLYIIRNSNVNLDVFVGNALVDMYLKC 253
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
N A VF + ++V+W+++I+G +Q+G + ++LY FRK+ G K D V + +VL
Sbjct: 254 GDANFARKVFQEMPVKNVVSWNSMISGLAQKGQFKESLYMFRKMQRLGVKPDDVTLVAVL 313
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ A + G +H Y+ ++ + +ALVDMY+KCG + VF+ M+ +++
Sbjct: 314 NSCANLGVLELGKWVHAYLDRNQIRADGFIGNALVDMYAKCGSIDQACWVFQAMNRKDVY 373
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+Y ++I+GL +HG +A + F ++ + G+ PDE TF +L AC H GLV +GR+ F M
Sbjct: 374 SYTAMIVGLAMHGQGGKALDLFSEMPKMGIEPDEVTFVGVLTACSHVGLVEEGRKYFEDM 433
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+ Y ++ + EHY MV LLG AG + EA FI ++P D V GALL C I+G +L
Sbjct: 434 STIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGKVEL 493
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E V ++ + +PRK V++SN Y+ RW D +KLR + + L K G S +
Sbjct: 494 GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGCSSIE 550
>gi|302141863|emb|CBI19066.3| unnamed protein product [Vitis vinifera]
Length = 521
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 267/532 (50%), Gaps = 34/532 (6%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LHA + K + D F+A L+ +Y ++L AR LFD+T +R+V W ++I AY+ +
Sbjct: 23 RSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERNVATWTTMISAYSSS 82
Query: 83 HRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
R + A + +L ++ + P+ F Y+ + +AC DL + +HG + LG D++
Sbjct: 83 GRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIHGRVFRANLGFDTVL 142
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L+ Y K + A KVFD + P N+MISG+ G ++++ LF M
Sbjct: 143 MNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLMEEAVNLFYQM----- 197
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P EP +S I GF +L+ +YA + A
Sbjct: 198 -P-------------EPDTVSWNSIIAGF-------------GILIDLYANDGKIKDALR 230
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F L D+V WS+LI+ ++ G FR + + D +I+SVL A +
Sbjct: 231 LFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQFIISSVLKACSSLVG 290
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +H + ++ G+E + ++L+D+Y+KCG + G+ +F SER+ + Y +I+G
Sbjct: 291 LGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTSERDTVCYTGIIMG 350
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G +G +A FF+++IE GL P+E TF +L AC H GLV + IF M EY ++
Sbjct: 351 CGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSACRHAGLVEEAWTIFKYMKTEYKMEP 410
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY +V+LL AG +EA I +P D + +LL C + ++L +A +L
Sbjct: 411 HIEHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTIWNSLLGACGTHKKTELVNFIAERL 470
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
P + V LSN YA WDD K+R+ I G+ KEAG SW+ S
Sbjct: 471 LTTLPEDPSILVTLSNVYATLEMWDDSRKMREVIKKVGM-KEAGKSWIQIKS 521
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/376 (20%), Positives = 166/376 (44%), Gaps = 34/376 (9%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ R C R +H I G+ D ++ L+ Y +SL+ +A ++FD + +
Sbjct: 9 VIRQCGRFRAFRHGRSLHAHIIKLGVFNDVFFANNLLAMYVDISLLKDARRLFDETLERN 68
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
+ +MIS ++ G D +L+ + ML +TP+ + ++ L G+ IH
Sbjct: 69 VATWTTMISAYSSSGRPDTALKFYVQMLESKSETPNGFLYSAVLKACGLVGDLESGKLIH 128
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
G +++ + + L+ MY +C ++SA VF+ + P +W+ +I+GY ++G
Sbjct: 129 GRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISGYGKEGLME 188
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+A+ F Q + D V S++A GF + L+
Sbjct: 189 EAVNLF----YQMPEPDTVSWNSIIA---------------------GFGI-------LI 216
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
D+Y+ G + +++F + E++I+ ++S+I G F FRD++ + D+
Sbjct: 217 DLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVNLDIEVDQF 276
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
S++L AC + G+++ + + G +++ ++ L G +E+ + +
Sbjct: 277 IISSVLKACSSLVGLGSGKQVHSFCVKS-GYESERITVTSLIDLYAKCGEIEDGLALFYC 335
Query: 469 LPKPVDPAVSGALLSC 484
+ +G ++ C
Sbjct: 336 TSERDTVCYTGIIMGC 351
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 165/397 (41%), Gaps = 35/397 (8%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +H V +A+L D L+ +Y L SAR +FD S WN++I
Sbjct: 121 LESGKLIHGRVFRANLGFDTVLMNTLLDMYVKCGSLSSARKVFDDILCPSSTSWNTMISG 180
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y +A +LF + +PD ++ +I++G G
Sbjct: 181 YGKEGLMEEAVNLFYQM----PEPDTVSW---------------------NSIIAGFG-- 213
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
L+ Y+ I +A+++F + + D+V+ +S+IS G LF M+
Sbjct: 214 -----ILIDLYANDGKIKDALRLFYRLPEKDIVVWSSLISWCTKMGLNSLVFSLFRDMVN 268
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
L D++ + ++ L G+ +H FC+KS ++S + L+ +YA+C +
Sbjct: 269 LDIEVDQFIISSVLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIED 328
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
+F D V ++ +I G Q G +A+ +F+++ G K + + VL+A
Sbjct: 329 GLALFYCTSERDTVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSACRH 388
Query: 319 SANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYN 376
+ V I Y+ ++ E + +V++ S+ G ++ M E + +N
Sbjct: 389 AGLVEEAWTIFKYMKTEYKMEPHIEHYYCIVELLSQAGCFKEAEELIAEMPFEPDQTIWN 448
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
S++ G H T + F + + L D S L
Sbjct: 449 SLLGACGTHKKT-ELVNFIAERLLTTLPEDPSILVTL 484
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 44/106 (41%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S L K++H+ K+ + T L+ LYA + LF T +R
Sbjct: 281 VLKACSSLVGLGSGKQVHSFCVKSGYESERITVTSLIDLYAKCGEIEDGLALFYCTSERD 340
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
+ II R +A F+ ++ LKP+ T+ + AC
Sbjct: 341 TVCYTGIIMGCGQNGRAMEAVGFFQEMIELGLKPNEITFLGVLSAC 386
>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 265/537 (49%), Gaps = 14/537 (2%)
Query: 16 HQSLSRTKELHALVAKASLLRDP--FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
H+ + RT +++P F ++++Y L AR +FD+ +R++ WN
Sbjct: 33 HEQMQRT------------VKNPPEFLENSVLKMYCKCGSLADARKVFDEMRERNLVSWN 80
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
+II AYA F+ +F N+L + KP+ TY R+ S L + +H AI S
Sbjct: 81 TIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRS 140
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GLG ++ ++A+ Y K ++ A VF+ +S+ + V ++ G+ +L LF
Sbjct: 141 GLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTGIMVGYTQAERQMDALALF 200
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M+ G DEY ++ L+ G+ IHG +K +S V + LV Y +C
Sbjct: 201 AKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKC 260
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ + SA F + P+ V+WSALITGY Q G++ +AL F L + + S+
Sbjct: 261 SNLESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIF 320
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A + A+ GA H I+ SA++ MYS+CG L +VFE++ + + +
Sbjct: 321 QACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAV 380
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ ++I G G +A + FR + + G+ P+ TF A+L AC H GLV +GR+ M
Sbjct: 381 AWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESM 440
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+ YG+ +HY MV + AG L+EA I S+P D LL C Y N ++
Sbjct: 441 SSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEI 500
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E+ A LF+ DP A +++ N YA G+W + +R + + LRKE SW++
Sbjct: 501 GELAAENLFQLDPEDTAGYILMFNLYASFGKWKEAANVRKMMAERNLRKELSCSWIT 557
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 133/279 (47%), Gaps = 10/279 (3%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL+ + L+ +++H + K L + T LV Y + L SA F+ +
Sbjct: 217 IVLKACAGLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEP 276
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W+++I Y F +A F++L + ++FTY I +ACS +D H
Sbjct: 277 NDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAH 336
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
AI S L SA++T YS+ +D A +VF+ + DPD V ++I+G+A+ G
Sbjct: 337 ADAIKSSLVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAP 396
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYV 242
++L+LF M G P+ T + +++ L+ G+ + + ++ D YD
Sbjct: 397 EALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYD-- 454
Query: 243 SSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
+V +Y+R + A + S+ F PD ++W L+ G
Sbjct: 455 --CMVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLLGG 491
>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 174/535 (32%), Positives = 276/535 (51%), Gaps = 13/535 (2%)
Query: 25 LHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
L+ LV K + + D F + + +YA + AR +FD +R+ +WN++I Y
Sbjct: 240 LYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYVQN 299
Query: 83 HRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ +A LF ++ + Q D+ T+ A S+ L R +H + S +
Sbjct: 300 NCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQVVI 359
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+A++ YS+ I + KVF + + D+V N+M+S F G D+ L L M + G
Sbjct: 360 LNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQKQGF 419
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D TL L+S +G+ H + ++ ++ + S L+ MYA+ + +A
Sbjct: 420 MVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ-FEGMDSYLIDMYAKSGLITTAQQ 478
Query: 262 VF--NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F NS + D TW+A+I GY+Q G + FRK+ Q + + V +AS+L A
Sbjct: 479 LFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTLASILPACNPM 538
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G IHG+ I+ +V V +AL+DMYSK G + VF E+N +TY ++I
Sbjct: 539 GTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMI 598
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G HG +A F ++ G+ PD TF A+L AC + GLV++G IF M EY I
Sbjct: 599 SSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILSACSYAGLVDEGLRIFQSMEREYKI 658
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVA 498
Q EHY + +LG G + EAY F+ L + + + G+LL C I+G +L ++VA
Sbjct: 659 QPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNTFGIWGSLLGACRIHGEFELGKVVA 718
Query: 499 HQLFENDPRKGA----YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++L E + KG+ Y V+LSN YA +G WD+V ++R ++ GL KEAG SWV
Sbjct: 719 NKLLEME--KGSSLTGYHVLLSNIYAAEGNWDNVDRVRKEMRQKGLMKEAGCSWV 771
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 198/379 (52%), Gaps = 10/379 (2%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
R +FD +R+V WN++I Y R +A +F+ ++R ++P ++ + A
Sbjct: 172 RRVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRM 231
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITS----SALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
SD ++G +V LG D + S+ + Y++L +D A ++FD + + +
Sbjct: 232 SDYDNANVLYG--LVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVW 289
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+MI G+ +++ LF ++ + D+ T + ++ + + L +G+ +H + L
Sbjct: 290 NTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYIL 349
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
KSS + + ++ MY+RC + +++ VF+++ D+VTW+ +++ + Q G + L
Sbjct: 350 KSSTILQVVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLM 409
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
+ QG D V + ++L+ A+ + G H Y+I+HG + M S L+DMY+
Sbjct: 410 LVFAMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQFEGM-DSYLIDMYA 468
Query: 353 KCGYLGLGIQVFETMS--ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
K G + Q+FE S +R+ T+N++I G +G + + F FR +IE+ + P+ T
Sbjct: 469 KSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNAVTL 528
Query: 411 SALLCACCHGGLVNDGREI 429
+++L AC G + G++I
Sbjct: 529 ASILPACNPMGTIGLGKQI 547
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 177/374 (47%), Gaps = 21/374 (5%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP--DNFTYACITRACSEN 117
LFD P+ + LWN+II + + DA LF +R P D++T++ +AC++
Sbjct: 59 LFDSIPRPTTVLWNTIIIGFICNNMPIDAL-LFYARMRASPSPKFDSYTFSSTLKACAQA 117
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK-------------LSLIDEAIKVFDG 164
L + +H + S G I ++L+ YS + D +VFD
Sbjct: 118 RSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRRVFDT 177
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ ++V N+MIS + ++ ++F M+R+G P + V + +W S
Sbjct: 178 MRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMSDYDNA 237
Query: 225 QGIHGFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
++G +K D D +V S + MYA C++ A +F+ + W+ +I GY
Sbjct: 238 NVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTMIGGYV 297
Query: 283 QQGDYGKALYYFRKLNMQGKK--ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Q +A+ F ++ M+ ++ D V S L A ++ + G +H Y+++ L
Sbjct: 298 QNNCPIEAIDLFVQV-MESEQFVLDDVTFLSALTAISQLQWLELGRQLHAYILKSSTILQ 356
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V++ +A++ MYS+CG +G +VF M ER+++T+N+++ +G + + +
Sbjct: 357 VVILNAIIVMYSRCGSIGTSFKVFSNMLERDVVTWNTMVSAFVQNGLDDEGLMLVFAMQK 416
Query: 401 KGLNPDESTFSALL 414
+G D T +ALL
Sbjct: 417 QGFMVDSVTLTALL 430
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP--DEYTLVGLISG 214
+A+ +FD + P VL N++I GF C LF +R +P D YT +
Sbjct: 55 QALHLFDSIPRPTTVLWNTIIIGFI-CNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--------------NCMNSAY 260
+ L +G+ +H L+S F S V + L++MY+ C NC +
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNC-DLVR 172
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+++ ++V W+ +I+ Y + +A FR + G + PV +V A + +
Sbjct: 173 RVFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSFVNVFPAVWRMS 232
Query: 321 NVWPGAVIHGYVIQHG--FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ V++G V++ G F V S+ + MY++ G + ++F+ ERN +N++
Sbjct: 233 DYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDFAREIFDCCLERNTEVWNTM 292
Query: 379 ILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREI 429
I G + +A + F ++E + D+ TF + L A + GR++
Sbjct: 293 IGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLELGRQL 344
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 84/168 (50%), Gaps = 14/168 (8%)
Query: 257 NSAYHVFNSLFHPDLVTWSALITGY-SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A H+F+S+ P V W+ +I G+ L+Y R K D +S L A
Sbjct: 54 HQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKFDSYTFSSTLKA 113
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC----GYLG---------LGIQ 362
A++ ++ G +H +V++ F S +V ++L++MYS C YLG L +
Sbjct: 114 CAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTAYDFNNCDLVRR 173
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
VF+TM +RN++ +N++I +AF+ FR ++ G+ P +F
Sbjct: 174 VFDTMRKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H + L R+ F T L+ +Y+ + + A +F +T +++ + ++I +Y
Sbjct: 545 KQIHGFAIRCFLNRNVFVGTALLDMYSKSGAITYAENVFAETLEKNSVTYTTMISSYGQH 604
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A SLF +L + +KPD+ T+ I ACS
Sbjct: 605 GMGERALSLFHAMLGSGIKPDSVTFVAILSACS 637
>gi|449447569|ref|XP_004141540.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
gi|449481506|ref|XP_004156203.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g71490-like [Cucumis sativus]
Length = 712
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 176/583 (30%), Positives = 286/583 (49%), Gaps = 39/583 (6%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
++ L++ +KS SL K+LH + + L+ D F +KLV Y+ LP A L +
Sbjct: 81 SISILLVSCTKS-SSLPPGKQLHGHIISSGLVEDSFLVSKLVMFYSSLEFLPEAHTLVET 139
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSL-FKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ WN +I +Y + H+ +A L +K ++ ++PDNFT+ I +AC E +L
Sbjct: 140 SNLFRPCSWNILITSY-VKHKLYEAAILAYKQMVSKGVRPDNFTFPSILKACGETQNLKF 198
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VH +AL++ Y + +D A +FD + + D V NSMIS ++
Sbjct: 199 GLEVHKSINSWSTPWSLFVHNALISMYGRCGEVDTARNLFDNMLERDAVSWNSMISCYSS 258
Query: 183 CGFWDKSLQLFDWM-------------------LRLGKTPDEYTL-------------VG 210
G W ++ +LF+ M LR+G L V
Sbjct: 259 RGMWREAFELFESMQSKCLEINVVTWNIIAGGCLRVGNFTQALKLLSQMRNFGIHLDDVA 318
Query: 211 LISGLWEPS---LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
+I GL S + +G+ IHGF ++ V + LV+MYARC + AY +F
Sbjct: 319 MIIGLGACSHIGAIRLGKEIHGFTIRHYHHMLSTVQNALVTMYARCKDIRHAYMLFRLND 378
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
+TW+++++G + G +AL FR+L + G + D V AS+L A+ A++ G
Sbjct: 379 DKSRITWNSMLSGLTHLGRVEEALCLFRELLLFGVEPDYVTFASILPLCARVADLQHGRE 438
Query: 328 IHGYVIQH-GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
H Y+ +H F +++ +ALVDMY++ G + ++F ++S+++ +TY S+I G G+ G
Sbjct: 439 FHCYITKHRDFRDHLLLWNALVDMYARAGKVSEAKRIFYSLSKKDEVTYTSLIAGYGMQG 498
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
+A F ++ + PD T A+L AC H GLVN +F M +G+ + EHY
Sbjct: 499 EGGKAVRLFEEMKRFQIKPDHITMIAVLSACSHSGLVNQAELLFAEMQSVHGLSPRLEHY 558
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP 506
M L G G L +A I +P A+ L+ C I+GN D+ E A +L E P
Sbjct: 559 ACMADLFGRVGLLNKAKEIITRMPYRPTSAIWATLIGACCIHGNMDIGEWAAEKLLEMRP 618
Query: 507 RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y V+++N YA G W + ++R + D+G+ K G SWV
Sbjct: 619 EHSGYYVLIANMYAAAGSWSKLAEIRTLMRDSGVAKIPGCSWV 661
>gi|255559100|ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540232|gb|EEF41805.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 164/519 (31%), Positives = 272/519 (52%), Gaps = 7/519 (1%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F + + +YA L R +FD ++S +WN++I + + F + LF +
Sbjct: 136 DLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMIGGHIQNNSFLEGVYLFLQAM 195
Query: 97 RTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+T+ D+ T+ A S+ L + +H + + +A++ YS+ + +
Sbjct: 196 KTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSV 255
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+ +VF+ + + D+V N+MISGF G ++ L L M + G D T+ L+S
Sbjct: 256 QTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAA 315
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF--NSLFHPDLVT 273
+G+ H + ++ +D + S L+ MYA+ + + VF N++ + D T
Sbjct: 316 SNLRNREIGKQTHAYLIRHGI-KFDGMDSYLIDMYAKSGLIRISQRVFENNNIQNRDQAT 374
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+A+I GY+Q G +A FR + Q + + V +AS+L A + ++ G +HG I
Sbjct: 375 WNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSI 434
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
++ + ++ V +ALVDMYSK G + VF SERN +TY ++ILG G HG A
Sbjct: 435 RYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALS 494
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F + + G+ PD TF A+L AC + GLV++G IF M ++ IQ T HY + +L
Sbjct: 495 LFHSMKKSGIQPDAITFVAVLSACSYAGLVDEGLRIFESMKRDFKIQPSTAHYCCVADML 554
Query: 454 GLAGNLEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVAHQLFENDP--RKGA 510
G G + EAY F+ L + + G+LL C ++G+ +L E V+++L E + R
Sbjct: 555 GRVGRVIEAYEFVKQLGEEGHVIEIWGSLLGACRLHGHIELGEEVSNRLLEMNSVDRLAG 614
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y+V+LSN YAE+ W+ V KLR + + GLRKE G SW+
Sbjct: 615 YQVLLSNMYAEEANWETVDKLRKSMREKGLRKEVGCSWI 653
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/376 (28%), Positives = 197/376 (52%), Gaps = 8/376 (2%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F +R V WN+++ Y R+ +A F+ +++ +KP ++ + A S D
Sbjct: 56 VFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSVGD 115
Query: 120 LPGLRFVHGGAIVSG--LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
++G + G D S+ ++ Y++L +D KVFD + + N+MI
Sbjct: 116 FKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNTMI 175
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-S 235
G + + + LF ++ T D+ T + ++ + + L +GQ +H F +K+ +
Sbjct: 176 GGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAFTMKNHT 235
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
S ++++LV MY+RCN + +++ VF + D+V+W+ +I+G+ Q G + L
Sbjct: 236 VLSVTVLNAILV-MYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEGLMLVY 294
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ QG AD V + S+L+AA+ N G H Y+I+HG + M S L+DMY+K G
Sbjct: 295 EMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIKFDGM-DSYLIDMYAKSG 353
Query: 356 YLGLGIQVFE--TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
+ + +VFE + R+ T+N+VI G +G QAF FR ++E+ L P+ T +++
Sbjct: 354 LIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNAVTLASI 413
Query: 414 LCACCHGGLVNDGREI 429
L AC G +N G+++
Sbjct: 414 LPACSSLGSINLGKQL 429
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 180/429 (41%), Gaps = 51/429 (11%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q L +++HA K + ++ +Y+ N + ++ +F+K P++ V WN++I
Sbjct: 218 QCLGLGQQMHAFTMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMI 277
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ + L + + D+ T + A S + + H I G+
Sbjct: 278 SGFIQNGLDEEGLMLVYEMQKQGFIADSVTVTSLLSAASNLRNREIGKQTHAYLIRHGIK 337
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFD--GVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D + S L+ Y+K LI + +VF+ + + D N++I+G+ G +++ F
Sbjct: 338 FDGM-DSYLIDMYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFR 396
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
ML P+ TL ++ +++G+ +HG ++ S D +V + LV MY++
Sbjct: 397 LMLEQNLRPNAVTLASILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSG 456
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+N A VF + VT++ +I GY Q G AL F + G + D + +VL+
Sbjct: 457 AINYAESVFTQSSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLS 516
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL---GIQVFETMS--- 368
A C Y GL G+++FE+M
Sbjct: 517 A--------------------------------------CSYAGLVDEGLRIFESMKRDF 538
Query: 369 --ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ + Y V LG G +A+EF + + E+G + + +LL AC G + G
Sbjct: 539 KIQPSTAHYCCVADMLGRVGRVIEAYEFVKQLGEEGHVIE--IWGSLLGACRLHGHIELG 596
Query: 427 REIFTRMTE 435
E+ R+ E
Sbjct: 597 EEVSNRLLE 605
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 132/265 (49%), Gaps = 13/265 (4%)
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
KVF + D++ N+M+S + + ++++ F M++ G P + V + P+
Sbjct: 55 KVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVF-----PA 109
Query: 220 LLSVG-----QGIHGFCLK--SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+ SVG ++G LK + + + +V S +SMYA C++ VF+S
Sbjct: 110 ISSVGDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAE 169
Query: 273 TWSALITGYSQQGDYGKALYYF-RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
W+ +I G+ Q + + +Y F + + + D V S L A ++ + G +H +
Sbjct: 170 VWNTMIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTAVSQLQCLGLGQQMHAF 229
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+++ LSV V +A++ MYS+C + +VFE M E++++++N++I G +G +
Sbjct: 230 TMKNHTVLSVTVLNAILVMYSRCNSVQTSFEVFEKMPEKDVVSWNTMISGFIQNGLDEEG 289
Query: 392 FEFFRDIIEKGLNPDESTFSALLCA 416
++ ++G D T ++LL A
Sbjct: 290 LMLVYEMQKQGFIADSVTVTSLLSA 314
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+ VF ++ D++ W+ +++ Y + Y +A+ FR + G K PV +V A +
Sbjct: 54 HKVFKTMHKRDVIAWNTMVSWYVKTERYVEAIRQFRLMMKWGIKPSPVSFVNVFPAISSV 113
Query: 320 ANVWPGAVIHGYVIQHGFELS--VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ V++G +++ G E + + V S+ + MY++ G L L +VF++ E++ +N+
Sbjct: 114 GDFKNANVLYGMLLKLGNEYANDLFVVSSAISMYAELGCLDLCRKVFDSCLEKSAEVWNT 173
Query: 378 VILG-LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+I G + + F + F + + + D+ TF + L A
Sbjct: 174 MIGGHIQNNSFLEGVYLFLQAMKTEHTILDDVTFLSALTA 213
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 57/107 (53%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S S++ K+LH + + SL ++ F T LV +Y+ + + A +F ++ +R+
Sbjct: 413 ILPACSSLGSINLGKQLHGVSIRYSLDQNIFVRTALVDMYSKSGAINYAESVFTQSSERN 472
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ ++I Y +A SLF ++ ++ ++PD T+ + ACS
Sbjct: 473 SVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDAITFVAVLSACS 519
>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
Length = 707
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/545 (30%), Positives = 281/545 (51%), Gaps = 3/545 (0%)
Query: 9 VLELSKSHQSLSRTKELHA--LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
+L+LS ++L K +H+ +V + L+ YA N + A LFD+ P+
Sbjct: 35 LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMPE 94
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRF 125
R+V W++++ Y L L K+++ + P+ + A +C + + R
Sbjct: 95 RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
HG + +G + +ALV+ YSK S++ +A+ V++ V D+V NS++S G+
Sbjct: 155 CHGLLLKTGFSFHNYVRNALVSMYSKCSIVQDAMGVWNEVPVNDIVAYNSILSSLVENGY 214
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ L++ M+ D+ T V S L +G +HG L S + YVSS
Sbjct: 215 LREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVSSA 274
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
+++MY +C A VF+ L ++V W+A++ Q G + +AL F K+ + K++
Sbjct: 275 IINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQENVKSN 334
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
A +L A A + G+++HG+ + GF+ VMV +AL++MY+K G + +VF
Sbjct: 335 EFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAAKKVFS 394
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M R+IIT+N++I G HG +A F+D++ +P+ TF+ +L AC H GLV +
Sbjct: 395 DMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHLGLVQE 454
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G + +++G+Q EHY +V LL G L EA +F+ + P D LL+ C
Sbjct: 455 GFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRTLLNAC 514
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
H++ N L VA + E DP +LSN YA++ RWD V+K+R + D ++KE G
Sbjct: 515 HVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKIKKEPG 574
Query: 546 VSWVS 550
VSW+
Sbjct: 575 VSWIE 579
>gi|357494773|ref|XP_003617675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519010|gb|AET00634.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 758
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/526 (30%), Positives = 272/526 (51%), Gaps = 4/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH LV K + + ++ +Y V A F + + + W S+IR YA
Sbjct: 236 LHGLVVKNGIGCLLDIQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGM 295
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+D F +L Q+ PD CI + D+ G + HG I D + ++
Sbjct: 296 MSDCVRFFWEMLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNS 355
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y K ++ A ++F S + N MI G+ G K +QLF M LG +
Sbjct: 356 LLSMYCKFGMLSFAERLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSE 414
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+V I+ + +++G+ IH +K D V++ L+ MY +C+ MN ++ +FN
Sbjct: 415 SVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFN 474
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
D++ W+ALI+ + Y +A+ F + M+ + + + VL+A + A +
Sbjct: 475 R-SERDVILWNALISAHIHVKHYEEAISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEK 533
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H Y+ + GF+L++ + +ALVDMY+KCG L +VF++M E+++I +N++I G G+
Sbjct: 534 GERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVFDSMMEKDVICWNAMISGYGM 593
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+G+ A E F + E + P+E TF +LL AC H GLV +G+ +F +M + Y ++ +
Sbjct: 594 NGYAESAIEIFNLMEESNVKPNEITFLSLLSACAHAGLVEEGKNVFAKM-QSYSVKPNLK 652
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV LLG + NLEEA + S+P P D V GALLS C + ++ + ++
Sbjct: 653 HYTCMVDLLGRSCNLEEAEELVLSMPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDS 712
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN-GLRKEAGVSWV 549
+P Y +M++N Y+ GRWD+ +R + D + K+AG S V
Sbjct: 713 EPENDGYYIMVANMYSSIGRWDEAENVRRTMKDRCSMGKKAGWSMV 758
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 200/428 (46%), Gaps = 5/428 (1%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H ++ LSK +L HA+ +PF A KL+ LY N S+ LF P
Sbjct: 11 HGELISLSKRITTLQSLLPFHAVTVTTGNSTNPFIAAKLISLYDTLNHPTSSSTLFHSLP 70
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ FLWNS ++ + S + + + P++FT+ + + + +
Sbjct: 71 FKDTFLWNSFLKTLFSRSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMN 130
Query: 126 VHGGAIVSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H A G +S S+ V+ YS+ +++A+KVFD + D+V +++ G+ G
Sbjct: 131 LHALACKVGFFPENSAVGSSFVSLYSRCDEMNDAVKVFDEIPVRDVVAWTALVIGYVQNG 190
Query: 185 FWDKSLQLFDWMLRLG---KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
+ L+ M R+G + P+ TL G L G+ +HG +K+
Sbjct: 191 ESEMGLECISEMYRVGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLD 250
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ S ++SMY +C AY F+ + + DL++W+++I Y++ G + +F ++
Sbjct: 251 IQSSVLSMYCKCGVPREAYQSFSEVINKDLLSWTSMIRVYARFGMMSDCVRFFWEMLENQ 310
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D ++I +L+ S +V+ G HG +I+ + MV ++L+ MY K G L
Sbjct: 311 VCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKFGMLSFAE 370
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
++F+ S+ +I +N +I+G G G + + FR++ G+ + + + +C G
Sbjct: 371 RLFQR-SQGSIEYWNFMIVGYGRIGKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLG 429
Query: 422 LVNDGREI 429
+N GR I
Sbjct: 430 EINLGRSI 437
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 4 NLHFLVLELSK-SHQS-LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
N LV+ LS SH + L + + LH + + + T LV +YA L +R +F
Sbjct: 514 NTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREVF 573
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
D ++ V WN++I Y + A +F + + +KP+ T+ + AC+
Sbjct: 574 DSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNEITFLSLLSACA 627
>gi|224077710|ref|XP_002305373.1| predicted protein [Populus trichocarpa]
gi|222848337|gb|EEE85884.1| predicted protein [Populus trichocarpa]
Length = 676
Score = 275 bits (702), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 278/533 (52%), Gaps = 3/533 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LH L + F L+ +Y + AR +FD ++SV WN++I Y
Sbjct: 142 RVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKN 201
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
N A +F ++ + ++ D + + AC +L R VHG LG+ I S
Sbjct: 202 GFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLGK-KIVS 260
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y+K +DEA VFD + + D+V SMI+G+ G +L LF M G
Sbjct: 261 NALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLR 320
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T+ ++ + L G+ +HG+ +K S V + L+ MYA+CNC+ ++ V
Sbjct: 321 PNSVTIALILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSV 380
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F V W+AL++G +A+ F+K+ M+G + + S+L A A++
Sbjct: 381 FTRTSRKKTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADL 440
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM--SERNIITYNSVIL 380
P I+ Y+++ GF ++ V+++L+D+YSKCG L ++F T+ ++I ++ +I
Sbjct: 441 QPVNNINSYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIA 500
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G+HG A F+ +++ G+ P++ TF+++L +C H G+V+DG +F M +++
Sbjct: 501 GYGMHGHGETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTI 560
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+HY MV LLG AG ++EAY I ++P AV GALL C ++ N +L E+ A
Sbjct: 561 PNDDHYTCMVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALLGACVMHENVELGEVAARW 620
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
LFE +P V+L+ YA GRW+D +R + D GLRK S + +
Sbjct: 621 LFELEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIEAGT 673
Score = 212 bits (539), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 146/495 (29%), Positives = 257/495 (51%), Gaps = 15/495 (3%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
QSL+ TK+LHA + + LL + LV YA + +AR LFD+ QR L+N +I
Sbjct: 35 QSLTSTKQLHAHLITSGLLSIDIRSV-LVATYAHCGYVHNARKLFDELRQRGTLLYNFMI 93
Query: 77 RAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ Y + +A +F +L ++ PDN+TY + +ACSE + R +HG +VS
Sbjct: 94 KMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSELLLVEYGRVLHGLTLVSKF 153
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
G ++L+ Y ++EA KVFD + + +V N+MI+G+ GF + +L +F+
Sbjct: 154 GSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMINGYFKNGFANTALVVFNQ 213
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G D ++V ++ L VG+ +HG ++ VS+ LV MYA+C
Sbjct: 214 MVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGL-VEEKVLGKKIVSNALVDMYAKCGS 272
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M+ A VF+++ D+V+W+++I GY GD AL F+ + ++G + + V IA +L A
Sbjct: 273 MDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIMQIEGLRPNSVTIALILLA 332
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A N+ G +HG+V++ V V ++L+DMY+KC LGL VF S + + +
Sbjct: 333 CASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRKKTVPW 392
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL-----VNDGREIF 430
N+++ G + +A F+ ++ +G+ + +T ++LL A +G L VN+
Sbjct: 393 NALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPA--YGILADLQPVNNINSYL 450
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV-DPAVSGALLSCCHIYG 489
R IQ T ++ + G+LE A+ ++P V D V +++ ++G
Sbjct: 451 MRSGFVSNIQVATS----LIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHG 506
Query: 490 NSDLAEIVAHQLFEN 504
+ + A + Q+ ++
Sbjct: 507 HGETAVSLFKQMVQS 521
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 3/329 (0%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L P Y + + L + +H I SGL I S LV Y+ + A
Sbjct: 17 LAPKTTQYQSLLKHYGAAQSLTSTKQLHAHLITSGLLSIDI-RSVLVATYAHCGYVHNAR 75
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEP 218
K+FD + +L N MI + G + +++++F ML PD YT +I E
Sbjct: 76 KLFDELRQRGTLLYNFMIKMYIAKGDYFEAMKVFLEMLGSKDCCPDNYTYPFVIKACSEL 135
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
L+ G+ +HG L S F S+ +V + L++MY C + A VF+++ +V+W+ +I
Sbjct: 136 LLVEYGRVLHGLTLVSKFGSHLFVLNSLLAMYMNCGEVEEARKVFDAMKEKSVVSWNTMI 195
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GY + G AL F ++ G + D + SVL A + G +HG V +
Sbjct: 196 NGYFKNGFANTALVVFNQMVDSGVEIDGASVVSVLPACGYLKELEVGRRVHGLVEEKVLG 255
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ VS+ALVDMY+KCG + VF+ M ER+++++ S+I G L+G A F+ +
Sbjct: 256 KKI-VSNALVDMYAKCGSMDEARLVFDNMVERDVVSWTSMINGYILNGDAKSALSLFKIM 314
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGR 427
+GL P+ T + +L AC + DGR
Sbjct: 315 QIEGLRPNSVTIALILLACASLNNLKDGR 343
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 6/276 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+L S +L + LH V K L + T L+ +YA N L + +F +T ++
Sbjct: 328 LILLACASLNNLKDGRCLHGWVMKQRLYSEVAVETSLIDMYAKCNCLGLSFSVFTRTSRK 387
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
WN+++ +A LFK +L ++ + T + A +DL + ++
Sbjct: 388 KTVPWNALLSGCVHNKLATEAIGLFKKMLMEGVEINAATCNSLLPAYGILADLQPVNNIN 447
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG--VSDPDLVLCNSMISGFAHCGF 185
+ SG + +++L+ YSK ++ A K+F+ V D+ + + +I+G+ G
Sbjct: 448 SYLMRSGFVSNIQVATSLIDIYSKCGSLESAHKIFNTIPVDVQDIFVWSIIIAGYGMHGH 507
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK--SSFDSYDYVS 243
+ ++ LF M++ G P++ T ++ ++ G + F LK + + D+ +
Sbjct: 508 GETAVSLFKQMVQSGVKPNDVTFTSVLQSCSHAGMVDDGLYLFKFMLKDHQTIPNDDHYT 567
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+V + R M+ AY + ++ F P W AL+
Sbjct: 568 C-MVDLLGRAGRMDEAYDLIKTMPFMPGHAVWGALL 602
>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Vitis vinifera]
Length = 808
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 156/561 (27%), Positives = 280/561 (49%), Gaps = 70/561 (12%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H V K D + L+ +YA+ + AR LFD++P WNSI+ Y
Sbjct: 161 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKK 220
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+AK +F + + R+ + S
Sbjct: 221 GDVEEAKLIFDQMPQ---------------------------------------RNIVAS 241
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++++ K+ + EA K+F+ + + D+V +++ISG+ G ++++L +F M G
Sbjct: 242 NSMIVLLGKMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMR 301
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA----------- 251
DE +V ++S S++ G+ IHG ++ +SY + + L+ MY+
Sbjct: 302 LDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKL 361
Query: 252 --------------------RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
+C + A +F+ + D+V+WSA+I+GY+Q + + L
Sbjct: 362 FNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCFSETL 421
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F ++ + + D ++ SV++A A + G +H Y+ ++G +++V++ + L+DMY
Sbjct: 422 ALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMY 481
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
KCG + ++VF M E+ + ++N++I+GL ++G ++ + F ++ G+ P+E TF
Sbjct: 482 MKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFM 541
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+L AC H GLV++GR F M E++GI+ +HY MV LLG AG L EA I S+P
Sbjct: 542 GVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPM 601
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
D A GALL C +G++++ E V +L E P + V+LSN +A G W+DV+++
Sbjct: 602 APDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEV 661
Query: 532 RDDIVDNGLRKEAGVSWVSGS 552
R + G+ K G S + +
Sbjct: 662 RGMMKQQGVVKTPGCSLIEAN 682
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 194/426 (45%), Gaps = 72/426 (16%)
Query: 35 LRDPFYATKLVRLYALNNV--LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLF 92
+ D F A++L++ + L + +FD+ + F+WN+++RAY ++ A L+
Sbjct: 70 ISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLY 129
Query: 93 KNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL 152
K +++ + PDN+TY + +AC+ G + +H + G D + L+ Y+
Sbjct: 130 KLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVC 189
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
+ +A K+FD D V NS+++G+ G +++ +FD M P +
Sbjct: 190 GNMRDARKLFDESPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM------PQRNIVA--- 240
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
S+ ++ + + + A+ +FN + D+V
Sbjct: 241 ------------------------------SNSMIVLLGKMGQVMEAWKLFNEMDEKDMV 270
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+WSALI+GY Q G Y +AL F ++N G + D V++ SVL+A A + V G +IHG V
Sbjct: 271 SWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLV 330
Query: 333 IQHGFELSVMVSSALVDMYS-------------------------------KCGYLGLGI 361
I+ G E V + +AL+ MYS KCG +
Sbjct: 331 IRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKAR 390
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+F+ M E++I+++++VI G H + F ++ + PDE+ +++ AC H
Sbjct: 391 ALFDVMPEKDIVSWSAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLA 450
Query: 422 LVNDGR 427
++ G+
Sbjct: 451 ALDQGK 456
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 35/210 (16%)
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ + +F+ + + + W+ ++ Y Q KAL ++ + D V+ A
Sbjct: 91 LDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQA 150
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC--------------------- 354
A + G IH +V++ GF+ V V + L++MY+ C
Sbjct: 151 CAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSW 210
Query: 355 -----GYLGLG-----IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
GY+ G +F+ M +RNI+ NS+I+ LG G +A++ F ++ EK
Sbjct: 211 NSILAGYVKKGDVEEAKLIFDQMPQRNIVASNSMIVLLGKMGQVMEAWKLFNEMDEK--- 267
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMT 434
D ++SAL+ G+ + +F M
Sbjct: 268 -DMVSWSALISGYEQNGMYEEALVMFIEMN 296
>gi|255584337|ref|XP_002532904.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527338|gb|EEF29484.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 169/538 (31%), Positives = 281/538 (52%), Gaps = 18/538 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ KE+HA + K +L D + A KL+ ++L + + A +F++ +V L+N++IRA
Sbjct: 36 FNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLIRA 95
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + A + F ++ + L DNFTY + +AC+ LP ++ +H G D
Sbjct: 96 HVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFFGD 155
Query: 139 SITSSALVTAYSKLSL--IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
++L+ +YSK L ++ A+K+F + + DLV NSMI G G ++ +LFD M
Sbjct: 156 LFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRARKLFDEM 215
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYARCNC 255
L G + G+ F L + VS S +VS Y +
Sbjct: 216 AERDAVSWNTILDGYVKA---------GEMSQAFNLFEKMPERNVVSWSTMVSGYCKTGD 266
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M A +F+ + +LVTW+ +I+G++++G +A + ++ G K D + S+LAA
Sbjct: 267 MEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISILAA 326
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A+S + G +H + + + SV VS+ALVDMY+KCG + + +F MS R+++++
Sbjct: 327 CAESGLLVLGKKVHASIKKIRIKCSVNVSNALVDMYAKCGRVDKALSIFNEMSMRDLVSW 386
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N ++ GL +HG +A + F + ++G PD+ T A+LCAC H G V+ G F M
Sbjct: 387 NCMLQGLAMHGHGEKAIQLFSKMQQEGFKPDKVTLIAILCACTHAGFVDQGLSYFNSMER 446
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
++GI EHY M+ LLG G LEEA+ + S+P + + G LL C ++ LAE
Sbjct: 447 DHGIVPHIEHYGCMIDLLGRGGRLEEAFRLVQSMPMEPNDVIWGTLLGACRVHNAVPLAE 506
Query: 496 IVAHQLF---ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V +L ++DP G Y MLSN +A G W+ V +R + G++K +G S +
Sbjct: 507 KVLDRLITLEQSDP--GNYS-MLSNIFAAAGDWNSVANMRLQMKSTGVQKPSGASSIE 561
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 146/315 (46%), Gaps = 12/315 (3%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
+D ++ VH I L D + L++A+S ++ A+ VF+ + DP++ L N++I
Sbjct: 34 TDFNHIKEVHAQIIKRNLHNDLYVAPKLISAFSLCHQMNLAVNVFNQIQDPNVHLYNTLI 93
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
K+ F M + G D +T L+ L Q IH K F
Sbjct: 94 RAHVQNSQSLKAFATFFDMQKNGLFADNFTYPFLLKACNGKGWLPTVQMIHCHVEKYGFF 153
Query: 238 SYDYVSSVLVSMYARCNCM--NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
+V + L+ Y++C + N A +F + DLV+W+++I G + GD G+A R
Sbjct: 154 GDLFVPNSLIDSYSKCGLLGVNYAMKLFMEMGEKDLVSWNSMIGGLVKAGDLGRA----R 209
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY-VIQHGFELSVMVSSALVDMYSKC 354
KL + + D V ++L K+ G + + + + E +V+ S +V Y K
Sbjct: 210 KLFDEMAERDAVSWNTILDGYVKA-----GEMSQAFNLFEKMPERNVVSWSTMVSGYCKT 264
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G + + +F+ M +N++T+ +I G G +A + + GL PD+ T ++L
Sbjct: 265 GDMEMARMLFDKMPFKNLVTWTIIISGFAEKGLAKEATTLYNQMEAAGLKPDDGTLISIL 324
Query: 415 CACCHGGLVNDGREI 429
AC GL+ G+++
Sbjct: 325 AACAESGLLVLGKKV 339
>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 1000
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 276/543 (50%), Gaps = 3/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
++ + S S +H+L ++SL LV +Y+ L A LF +R
Sbjct: 252 LMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRD 311
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I +Y DA L T P++ T++ ACS L + VH
Sbjct: 312 LISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA 371
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ L R+ + ++L+T Y K + +++A KVF + D+V N +I G+A K
Sbjct: 372 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTK 431
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPS--LLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++Q+F WM G P+ T++ I G + S L + G+ +H + +++ F S +YV++ L
Sbjct: 432 AMQVFSWMRSAGIKPNYITMIN-IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSL 490
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MYA+C + S+ ++FNS+ + ++V+W+A+I Q G +AL F + G K D
Sbjct: 491 ITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDR 550
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V +A L++ A A++ G +HG ++ G + V +A +DMY KCG + +QV
Sbjct: 551 VCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPD 610
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ R +N++I G +G+ +A E F+ ++ G PD TF ALL AC H GLV+ G
Sbjct: 611 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 670
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+ + M +G+ +H + +V LLG G EA FI +P + + +LLS
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSR 730
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+ N ++ A +L E DP + V+LSN YA + RW DV KLR + + K
Sbjct: 731 THKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPAC 790
Query: 547 SWV 549
SW+
Sbjct: 791 SWL 793
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 197/383 (51%), Gaps = 2/383 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HAL +A L+ + + T L+ LY ++ A+ LF + P+R+V W +++ A +
Sbjct: 66 IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 125
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRAC-SENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A ++ + R + + +A + C S +++PGL+ V IVSGL ++
Sbjct: 126 LEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQ-VASQVIVSGLQNQVSVAN 184
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+T + L + +A K+FD + + D + N+MIS ++H G K +F M G P
Sbjct: 185 SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D TL L+S S G GIH CL+SS DS V + LV+MY+ ++ A +F
Sbjct: 245 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
++ DL++W+ +I+ Y Q + AL +L + + + +S L A + +
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 364
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H V+Q + +++V ++L+ MY KC + +VF++M +I++YN +I G
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 424
Query: 384 LHGFTYQAFEFFRDIIEKGLNPD 406
+ +A + F + G+ P+
Sbjct: 425 VLEDGTKAMQVFSWMRSAGIKPN 447
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 11/395 (2%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
A L+ ++ + A LFD+ + WN++I Y+ + +F ++ L
Sbjct: 183 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 242
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS-----ALVTAYSKLSLI 155
+PD T + C+ + F HG I S R S+ SS ALV YS +
Sbjct: 243 RPDATTLCSLMSVCASSD-----HFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A +F +S DL+ N+MIS + +L+ + ++P+ T +
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC 357
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
P L G+ +H L+ S V + L++MY +CN M A VF S+ D+V+++
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYN 417
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQ 334
LI GY+ D KA+ F + G K + + + ++ + A S ++ G +H Y+I+
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIR 477
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF V+++L+ MY+KCG L +F +++ +NI+++N++I G +A +
Sbjct: 478 TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKL 537
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
F D+ G D + L +C + +G ++
Sbjct: 538 FIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL 572
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/414 (20%), Positives = 181/414 (43%), Gaps = 8/414 (1%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+ D+TP W + + R A + + + + F A + AC
Sbjct: 1 MADRTPS----TWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGR 56
Query: 120 LPGLR---FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
G+ +H +GL + +AL+ Y ++ +A ++F + + ++V ++
Sbjct: 57 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTAL 116
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
+ + G+ +++L+ + M R G + ++S G + + S
Sbjct: 117 MVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 176
Query: 237 DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+ V++ L++M+ ++ A +F+ + D ++W+A+I+ YS QG K F
Sbjct: 177 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 236
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ G + D + S+++ A S + G+ IH ++ + SV V +ALV+MYS G
Sbjct: 237 MRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 296
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
L +F MS R++I++N++I + + A + + +P+ TFS+ L A
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGA 356
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
C G + DG+ + + + +Q ++ + G ++E+A S+P
Sbjct: 357 CSSPGALIDGKMVHA-IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 409
>gi|356519887|ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 162/509 (31%), Positives = 275/509 (54%), Gaps = 6/509 (1%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
LV +Y +++ +FD+ +R+V WN+II +++ ++ DA +F+ ++ ++P+
Sbjct: 282 LVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGMRPN 341
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
+ T + + E VHG ++ + D S++L+ Y+K A +F+
Sbjct: 342 SVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIASTIFN 401
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ ++V N+MI+ FA ++++L M G+TP+ T ++ L+V
Sbjct: 402 KMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGFLNV 461
Query: 224 GQGIHGFCLK--SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
G+ IH ++ SS D + VS+ L MY++C C+N A +VFN + D V+++ LI GY
Sbjct: 462 GKEIHARIIRVGSSLDLF--VSNALTDMYSKCGCLNLAQNVFN-ISVRDEVSYNILIIGY 518
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
S+ D ++L F ++ + G + D V V++A A A + G IHG +++ F +
Sbjct: 519 SRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIRQGKEIHGLLVRKLFHTHL 578
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V+++L+D+Y++CG + L +VF + +++ ++N++ILG G+ G A F + E
Sbjct: 579 FVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILGYGMRGELDTAINLFEAMKED 638
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
G+ D +F A+L AC HGGL+ GR+ F +M + I+ HY MV LLG AG +EE
Sbjct: 639 GVEYDSVSFVAVLSACSHGGLIEKGRKYF-KMMCDLNIEPTHTHYACMVDLLGRAGLMEE 697
Query: 462 AYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAE 521
A I L D + GALL C I+GN +L A LFE P+ Y ++LSN YAE
Sbjct: 698 AADLIRGLSIIPDTNIWGALLGACRIHGNIELGLWAAEHLFELKPQHCGYYILLSNMYAE 757
Query: 522 DGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
RWD+ K+R+ + G +K G SWV
Sbjct: 758 AERWDEANKVRELMKSRGAKKNPGCSWVQ 786
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 128/431 (29%), Positives = 223/431 (51%), Gaps = 7/431 (1%)
Query: 9 VLELSKSHQSLSRTKELHAL-VAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP-- 65
+L+L +LS+TK++HA + L R L+ YA ++ +LF +
Sbjct: 40 LLQLCTLCDTLSQTKQVHAYSLLHGFLPRSVSLCASLILQYASFGHPSNSLLLFQHSVAY 99
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
RS FLWN++IRA ++A F D + ++R +KPD TY + + CS+ ++ R
Sbjct: 100 SRSAFLWNTLIRANSIAGVF-DGFGTYNTMVRAGVKPDECTYPFVLKVCSDFVEVRKGRE 158
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG A G D + L+ Y L +A+KVFD + + D V N++I + GF
Sbjct: 159 VHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPERDKVSWNTVIGLCSLHGF 218
Query: 186 WDKSLQLFDWML--RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-DSYDYV 242
++++L F M+ + G PD T+V ++ E + + +H + LK + V
Sbjct: 219 YEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARIVHCYALKVGLLGGHVKV 278
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV +Y +C ++ VF+ + ++++W+A+IT +S +G Y AL FR + +G
Sbjct: 279 GNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRGKYMDALDVFRLMIDEGM 338
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ + V I+S+L + G +HG+ ++ E V +S++L+DMY+K G +
Sbjct: 339 RPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISNSLIDMYAKSGSSRIAST 398
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F M RNI+++N++I + Y+A E R + KG P+ TF+ +L AC G
Sbjct: 399 IFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETPNNVTFTNVLPACARLGF 458
Query: 423 VNDGREIFTRM 433
+N G+EI R+
Sbjct: 459 LNVGKEIHARI 469
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/425 (28%), Positives = 215/425 (50%), Gaps = 4/425 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL++ + + +E+H + K D F L+ Y + A +FD+ P+R
Sbjct: 142 FVLKVCSDFVEVRKGREVHGVAFKLGFDGDVFVGNTLLAFYGNCGLFGDAMKVFDEMPER 201
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ--LKPDNFTYACITRACSENSDLPGLRF 125
WN++I +L + +A F+ ++ + ++PD T + C+E D R
Sbjct: 202 DKVSWNTVIGLCSLHGFYEEALGFFRVMVAAKPGIQPDLVTVVSVLPVCAETEDKVMARI 261
Query: 126 VHGGAIVSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH A+ GL G +ALV Y K + KVFD + + +++ N++I+ F+ G
Sbjct: 262 VHCYALKVGLLGGHVKVGNALVDVYGKCGSEKASKKVFDEIDERNVISWNAIITSFSFRG 321
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+ +L +F M+ G P+ T+ ++ L E L +G +HGF LK + +S ++S+
Sbjct: 322 KYMDALDVFRLMIDEGMRPNSVTISSMLPVLGELGLFKLGMEVHGFSLKMAIESDVFISN 381
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+ MYA+ A +FN + ++V+W+A+I +++ +A+ R++ +G+
Sbjct: 382 SLIDMYAKSGSSRIASTIFNKMGVRNIVSWNAMIANFARNRLEYEAVELVRQMQAKGETP 441
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ V +VL A A+ + G IH +I+ G L + VS+AL DMYSKCG L L VF
Sbjct: 442 NNVTFTNVLPACARLGFLNVGKEIHARIIRVGSSLDLFVSNALTDMYSKCGCLNLAQNVF 501
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+S R+ ++YN +I+G + ++ F ++ G+ PD +F ++ AC + +
Sbjct: 502 -NISVRDEVSYNILIIGYSRTNDSLESLRLFSEMRLLGMRPDIVSFMGVVSACANLAFIR 560
Query: 425 DGREI 429
G+EI
Sbjct: 561 QGKEI 565
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ + KE+H L+ + F A L+ LY + A +F + V WN++I
Sbjct: 559 IRQGKEIHGLLVRKLFHTHLFVANSLLDLYTRCGRIDLATKVFYCIQNKDVASWNTMILG 618
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
Y + + A +LF+ + ++ D+ ++ + ACS HGG I G
Sbjct: 619 YGMRGELDTAINLFEAMKEDGVEYDSVSFVAVLSACS-----------HGGLIEKG 663
>gi|4544411|gb|AAD22320.1| hypothetical protein [Arabidopsis thaliana]
gi|91806147|gb|ABE65802.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 582
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 277/532 (52%), Gaps = 7/532 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+S+ + +H + AK+ L D L+ Y+ L SA +LF + +S WN++I A
Sbjct: 57 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 116
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+ + +A ++FKN+ ++ T + A + L H + G+ D
Sbjct: 117 YSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVND 170
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++LV AYS+ + A +++ +V S++S +A G D ++ F +
Sbjct: 171 ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQ 230
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
L D LVG++ G + S + +G +HG+ +KS + V + L++MY++ + + +
Sbjct: 231 LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 290
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK-ADPVLIASVLAAAA 317
+F L L++W+++I+G Q G A F ++ + G D + IAS+LA +
Sbjct: 291 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 350
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G +HGY +++ FE V +AL+DMY+KCG VF+++ T+NS
Sbjct: 351 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 410
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G L G ++A + ++ EKGL PDE TF +L AC HGG V++G+ F M +E+
Sbjct: 411 MISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEF 470
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI +HY MV LLG A EA IW + D AV GALLS C I+ ++ E V
Sbjct: 471 GISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYV 530
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++F D + G V++SN YA + WDDV+++R+ + DNG GVS +
Sbjct: 531 ARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 193/413 (46%), Gaps = 16/413 (3%)
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P+R +WN++I Y+ DA LF +L+ P T + C + + R
Sbjct: 2 PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 61
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VHG A SGL DS +AL++ YSK + + A +F + D V N+MI ++ G
Sbjct: 62 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISG--LWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++++ +F M T++ L+S EP +H +K + V
Sbjct: 122 LQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP--------LHCLVVKCGMVNDISV 173
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV Y+RC C+ SA ++ S +V +++++ Y+++GD A+ YF K
Sbjct: 174 VTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCM 233
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D V + +L KS+++ G +HGY I+ G +V + L+ MYSK + +
Sbjct: 234 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF 293
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD-IIEKGLNPDESTFSALLCACCHGG 421
+FE + E +I++NSVI G G AFE F ++ GL PD T ++LL C
Sbjct: 294 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYSFIWSLPKP 472
+N G+E+ + E+++ ++ + GN +A S S+ P
Sbjct: 354 CLNLGKELHGYTLRN---NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 403
>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
Length = 672
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 153/521 (29%), Positives = 275/521 (52%), Gaps = 33/521 (6%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F+ + ++ +WN++ R +AL A L+ ++ L P+++++ + ++C+++
Sbjct: 21 IFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAKSKA 80
Query: 120 LPGLRFVHGGAIVSGLG-------------------------------RDSITSSALVTA 148
L + +HG + G R ++ +AL+T
Sbjct: 81 LIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTALITG 140
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y+ I+ A K+FD +S D+V N+MISG+ + ++L+L+ M++ PDE T+
Sbjct: 141 YASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDESTM 200
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
V ++S + + +G+ +H + F S + +VL+ +Y++C + +A +F L
Sbjct: 201 VTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQGLAK 260
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D+++W+ LI G++ Y +AL F+++ G+ + V + SVL A A + G I
Sbjct: 261 KDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWI 320
Query: 329 HGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
H Y+ + G + + ++L+DMY+KCG + QVF++M R++ ++N++I G +HG
Sbjct: 321 HVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHG 380
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
AF+ F + + G++PD+ TF LL AC H G+++ GR IF M+++Y I K EHY
Sbjct: 381 KANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHY 440
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP 506
M+ LLG G +EA I ++P D + +LL C ++ N +L E A L + +P
Sbjct: 441 GCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESYAQNLIKIEP 500
Query: 507 RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
V+LSN YA GRWD V K+R + D G++K G S
Sbjct: 501 ENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCS 541
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 173/337 (51%), Gaps = 32/337 (9%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
AI +F+ + +P+L++ N+M G A +L+L+ M+ LG P+ Y+ L+ +
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
L GQ IHG LK +D YV++ L+SMYA+ + A+ VF+ H +V+++AL
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 278 ITGYSQQG-------------------------------DYGKALYYFRKLNMQGKKADP 306
ITGY+ +G ++ +AL ++ + K D
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ +V++A A+S ++ G +H ++ HGF ++ + + L+D+YSKCG + +F+
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQG 257
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
++++++I++N++I G +A F++++ G +P++ T ++L AC H G ++ G
Sbjct: 258 LAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIG 317
Query: 427 REIFTRMTEEY-GIQAKTEHYIYMVKLLGLAGNLEEA 462
R I + + G+ + ++ + G++E A
Sbjct: 318 RWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAA 354
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 113/244 (46%), Gaps = 32/244 (13%)
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F ++ P+L+ W+ + G++ D AL + + G + +L + AK
Sbjct: 18 AISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKSCAK 77
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S + G IHG+V++ G++L + V+++L+ MY++ G L +VF+ S R++++Y ++
Sbjct: 78 SKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGRLEDAHKVFDRSSHRHVVSYTAL 137
Query: 379 ILGLGLHGFT-------------------------------YQAFEFFRDIIEKGLNPDE 407
I G G+ +A E ++D+++ + PDE
Sbjct: 138 ITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKTNVKPDE 197
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
ST ++ AC G + GR++ + + E++G + + ++ L G +E A
Sbjct: 198 STMVTVVSACAQSGSIELGRQLHSWI-EDHGFGSNIKIVNVLIDLYSKCGEVETACGLFQ 256
Query: 468 SLPK 471
L K
Sbjct: 257 GLAK 260
>gi|357129835|ref|XP_003566566.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g05340-like [Brachypodium distachyon]
Length = 614
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 171/520 (32%), Positives = 258/520 (49%), Gaps = 27/520 (5%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP- 102
LV +YA A +FD+ R WNS+I + DA S F+ +LR+ P
Sbjct: 61 LVSMYARCGRHAEAARVFDEMRIRDSVSWNSLIGSSGA----EDALSQFRRMLRSSSSPG 116
Query: 103 -----DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
D+ T+ + AC+ + LP VHG + G + +ALVTAY +
Sbjct: 117 GGVSCDHATFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGS 176
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A + F G+++ +++ +MISG A + S+ LF M R V S +
Sbjct: 177 AERAFHGMAERNVITWTAMISGMAREELYKDSIVLFQQMRRT---------VDANSATYS 227
Query: 218 PSLLSV--------GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
SLL+ GQ IHG +K+ ++ +V S L+ +Y++C M VF P
Sbjct: 228 SSLLACAGSLALKEGQQIHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQP 287
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D ++ + ++ G++Q G KA F ++ +G D ++++VL A SA G IH
Sbjct: 288 DEISLTVILVGFAQNGLEEKAFELFAEMAGEGILIDTNMVSAVLGAFGASAPFALGKQIH 347
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
VI+ F ++ V + L++MYSKCG L IQVF +N I++NS+I HG
Sbjct: 348 ALVIKKCFGRNIYVCNGLINMYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGS 407
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+ F+ F + G NP + TF +LL C H G G EI M+ EYGI + EHY +
Sbjct: 408 EVFKLFESMKADGANPTDVTFLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEHYACV 467
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
V +LG AG LE+A SFI P + AL+ C GNS++ + A +L DP
Sbjct: 468 VDMLGRAGLLEDARSFIEDGPFKDSALLWQALMGACSFRGNSEIGKYAAEKLLHLDPDSP 527
Query: 510 AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A V+LSN Y+ +GRWDD ++ + + GLRK+ G SW+
Sbjct: 528 AAYVLLSNIYSSEGRWDDRARVMKSMREMGLRKDTGKSWI 567
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 151/350 (43%), Gaps = 2/350 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL SL +H LV + LV Y SA F +R+
Sbjct: 129 VLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESPGSAERAFHGMAERN 188
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I A + D+ LF+ + RT + ++ TY+ AC+ + L + +HG
Sbjct: 189 VITWTAMISGMAREELYKDSIVLFQQMRRT-VDANSATYSSSLLACAGSLALKEGQQIHG 247
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +GL D S L+ YSK L+++ + VF PD + ++ GFA G +K
Sbjct: 248 LVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLTVILVGFAQNGLEEK 307
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +LF M G D + ++ + ++G+ IH +K F YV + L++
Sbjct: 308 AFELFAEMAGEGILIDTNMVSAVLGAFGASAPFALGKQIHALVIKKCFGRNIYVCNGLIN 367
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++C + + VFN + ++W+++I +++ G + F + G V
Sbjct: 368 MYSKCGELEESIQVFNETPSKNSISWNSIIAAFARHGQGSEVFKLFESMKADGANPTDVT 427
Query: 309 IASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
S+L + + G +++ ++G V + +VDM + G L
Sbjct: 428 FLSLLHGCSHVGSAKKGLEILNSMSSEYGILPRVEHYACVVDMLGRAGLL 477
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 139/280 (49%), Gaps = 11/280 (3%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV+ Y++ EA +VFD + D V NS+I + +L F MLR +
Sbjct: 59 NALVSMYARCGRHAEAARVFDEMRIRDSVSWNSLIGSSGA----EDALSQFRRMLRSSSS 114
Query: 203 P------DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
P D T ++S + L +HG + F++ V + LV+ Y C
Sbjct: 115 PGGGVSCDHATFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESP 174
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA F+ + +++TW+A+I+G +++ Y ++ F+++ + A+ +S L A
Sbjct: 175 GSAERAFHGMAERNVITWTAMISGMAREELYKDSIVLFQQMR-RTVDANSATYSSSLLAC 233
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A S + G IHG V++ G E + V S L+D+YSKCG + + VF + + I+
Sbjct: 234 AGSLALKEGQQIHGLVVKAGLETDLHVESGLMDLYSKCGLMEDTLSVFRLCRQPDEISLT 293
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+++G +G +AFE F ++ +G+ D + SA+L A
Sbjct: 294 VILVGFAQNGLEEKAFELFAEMAGEGILIDTNMVSAVLGA 333
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 11/192 (5%)
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL------ 297
+ LVSMYARC A VF+ + D V+W++LI G S D AL FR++
Sbjct: 59 NALVSMYARCGRHAEAARVFDEMRIRDSVSWNSLI-GSSGAED---ALSQFRRMLRSSSS 114
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G D +VL+A A+ A++ A++HG V+ GFE V V +ALV Y +C
Sbjct: 115 PGGGVSCDHATFTTVLSACAREASLPTCAMVHGLVVSRGFEAEVSVGNALVTAYFECESP 174
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G + F M+ERN+IT+ ++I G+ + F+ + + ++ + +T+S+ L AC
Sbjct: 175 GSAERAFHGMAERNVITWTAMISGMAREELYKDSIVLFQQ-MRRTVDANSATYSSSLLAC 233
Query: 418 CHGGLVNDGREI 429
+ +G++I
Sbjct: 234 AGSLALKEGQQI 245
>gi|449522418|ref|XP_004168223.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 274 bits (701), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 258/513 (50%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + +V +Y + AR LF+ R + WNS++ AY+ + L + +
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMK 240
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+KPD T+ A + DL + VHG + GL D SALV Y + +D
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A KVF ++ D+V+ +MISG DK+L +F M+ P TL ++
Sbjct: 301 PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ +G IHG+ L+ + LV+MYA+CN + + +FN + DLV+W+A
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNA 420
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
++ G+++ G K +++F ++ + D + + S+L A + + G IH +V++
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+M +ALVDMY KCG L + F+ M +R+++ ++++I+G G +G A +
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYS 540
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+ + G+ P+ F ++L AC HGGL++ G I+ MT+++ + EH +V LL A
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRA 600
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G ++EAYSF + K V G LL C + G +L +++A +FE P V L+
Sbjct: 601 GKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N+YA RWD V K + GL+K G S +
Sbjct: 661 NSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSI 693
Score = 195 bits (495), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 204/405 (50%), Gaps = 3/405 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH V L D + + L+ YA + R +FD +R+V W +II +Y+
Sbjct: 71 LHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGD 130
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ A S+FK + + ++P + T + S+ LP L +H I+ G D S++
Sbjct: 131 IDIAFSMFKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNS 187
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
+V Y K I +A ++F+ + D+V NS++S ++ G ++ LQL M PD
Sbjct: 188 MVNMYGKCGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPD 247
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+ T +S L +G+ +HG LK + +V S LV +Y RC C++ AY VF
Sbjct: 248 KQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFK 307
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S D+V W+A+I+G Q KAL F ++ K +AS LAA A+
Sbjct: 308 STTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDI 367
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
GA IHGYV++ G L + ++LV MY+KC L +F M E++++++N+++ G
Sbjct: 368 GASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAK 427
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G+ + FF ++ + L PD T ++LL AC G + G+ I
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 5/387 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H L+ K L D + LV LY L A +F T ++ V +W ++I
Sbjct: 268 KLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQN 327
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A +F ++ + +KP T A AC++ +HG + G+ D
Sbjct: 328 DCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQ 387
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LVT Y+K + + ++ +F+ + + DLV N++++G A G+ K + F+ M +
Sbjct: 388 NSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLR 447
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T+ L+ L G+ IH F L+SS + LV MY +C + +A
Sbjct: 448 PDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKC 507
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + DLV WS LI GY G AL + + G + + V+ SVL+A + +
Sbjct: 508 FDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLI 567
Query: 323 WPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETM-SERNIITYNSVI 379
G I+ + + F +S + + +VD+ S+ G + ++ M E +I+ ++
Sbjct: 568 SKGLSIYESMTKD-FRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLL 626
Query: 380 LGLGLHGFTYQAFEFFRDIIE-KGLNP 405
++G RD+ E K ++P
Sbjct: 627 DACRVNGRVELGKVIARDMFELKPVDP 653
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 132/267 (49%), Gaps = 14/267 (5%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
NS++S ++ G + LQ + M + D YT L +L S G +H +
Sbjct: 18 NSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVV 77
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ Y+ S L+S YA+ C++ VF+++ ++V W+ +I YS++GD A
Sbjct: 78 NGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSM 137
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F+++ G + V + S+L +K + +H +I HGFE + +S+++V+MY K
Sbjct: 138 FKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNMYGK 194
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + ++FE++ R+I+++NS++ G T + + + + + + PD+ TF +
Sbjct: 195 CGRIADARRLFESIGCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSA 254
Query: 414 LCACC-----------HGGLVNDGREI 429
L A HG ++ DG I
Sbjct: 255 LSASAIKGDLRLGKLVHGLMLKDGLNI 281
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%)
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+ S+ H ++++L++ S QG + + L + + + D S+ A
Sbjct: 5 IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNL 64
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G +H V+ +G + S+L+ Y+K G + LG +VF+TM +RN++ + ++I
Sbjct: 65 FSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGS 124
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G AF F+ + E G+ P T +LL
Sbjct: 125 YSREGDIDIAFSMFKQMRESGIQPTSVTLLSLL 157
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S +L + K +H V ++SL+ T LV +Y L +A+ FD QR
Sbjct: 456 LLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRD 515
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W+++I Y + A + L T ++P++ + + ACS HG
Sbjct: 516 LVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACS-----------HG 564
Query: 129 GAIVSGL 135
G I GL
Sbjct: 565 GLISKGL 571
>gi|116831059|gb|ABK28484.1| unknown [Arabidopsis thaliana]
Length = 583
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 166/532 (31%), Positives = 277/532 (52%), Gaps = 7/532 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+S+ + +H + AK+ L D L+ Y+ L SA +LF + +S WN++I A
Sbjct: 57 VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGA 116
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+ + +A ++FKN+ ++ T + A + L H + G+ D
Sbjct: 117 YSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPL------HCLVVKCGMVND 170
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++LV AYS+ + A +++ +V S++S +A G D ++ F +
Sbjct: 171 ISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQ 230
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
L D LVG++ G + S + +G +HG+ +KS + V + L++MY++ + + +
Sbjct: 231 LCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVET 290
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK-ADPVLIASVLAAAA 317
+F L L++W+++I+G Q G A F ++ + G D + IAS+LA +
Sbjct: 291 VLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCS 350
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G +HGY +++ FE V +AL+DMY+KCG VF+++ T+NS
Sbjct: 351 QLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNS 410
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G L G ++A + ++ EKGL PDE TF +L AC HGG V++G+ F M +E+
Sbjct: 411 MISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEF 470
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI +HY MV LLG A EA IW + D AV GALLS C I+ ++ E V
Sbjct: 471 GISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYV 530
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++F D + G V++SN YA + WDDV+++R+ + DNG GVS +
Sbjct: 531 ARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 582
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 114/413 (27%), Positives = 193/413 (46%), Gaps = 16/413 (3%)
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P+R +WN++I Y+ DA LF +L+ P T + C + + R
Sbjct: 2 PERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGR 61
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VHG A SGL DS +AL++ YSK + + A +F + D V N+MI ++ G
Sbjct: 62 SVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSG 121
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISG--LWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++++ +F M T++ L+S EP +H +K + V
Sbjct: 122 LQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP--------LHCLVVKCGMVNDISV 173
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV Y+RC C+ SA ++ S +V +++++ Y+++GD A+ YF K
Sbjct: 174 VTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCM 233
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D V + +L KS+++ G +HGY I+ G +V + L+ MYSK + +
Sbjct: 234 KIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLF 293
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD-IIEKGLNPDESTFSALLCACCHGG 421
+FE + E +I++NSVI G G AFE F ++ GL PD T ++LL C
Sbjct: 294 LFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLC 353
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYSFIWSLPKP 472
+N G+E+ + E+++ ++ + GN +A S S+ P
Sbjct: 354 CLNLGKELHGYTLRN---NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAP 403
>gi|15227199|ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g22410, mitochondrial; Flags: Precursor
gi|4544450|gb|AAD22358.1| hypothetical protein [Arabidopsis thaliana]
gi|18086349|gb|AAL57637.1| At2g22410/F14M13.19 [Arabidopsis thaliana]
gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis thaliana]
gi|330252206|gb|AEC07300.1| protein slow growth 1 [Arabidopsis thaliana]
Length = 681
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 174/590 (29%), Positives = 294/590 (49%), Gaps = 48/590 (8%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNN--VLPSARIL 60
F LH +L L + + L K++ A + L+ DPF +++L+ AL+ L + +
Sbjct: 50 FVLHNPLLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKI 109
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR---TQLKPDNFTYACITRACSEN 117
++F WN IR ++ + ++ L+K +LR + +PD+FTY + + C++
Sbjct: 110 LKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCAD- 168
Query: 118 SDLPGLRFVHGGAIVSG------LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
LR G ++ G L S +A + ++ ++ A KVFD DLV
Sbjct: 169 -----LRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLV 223
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N +I+G+ G +K++ ++ M G PD+ T++GL+S L+ G+ + +
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 232 LKSS---------------------------FDSYDYVSSV----LVSMYARCNCMNSAY 260
++ FD+ + + V ++S YARC ++ +
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSR 343
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F+ + D+V W+A+I G Q AL F+++ K D + + L+A ++
Sbjct: 344 KLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLG 403
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G IH Y+ ++ L+V + ++LVDMY+KCG + + VF + RN +TY ++I
Sbjct: 404 ALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIG 463
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
GL LHG A +F ++I+ G+ PDE TF LL ACCHGG++ GR+ F++M + +
Sbjct: 464 GLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLN 523
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+ +HY MV LLG AG LEEA + S+P D AV GALL C ++GN +L E A +
Sbjct: 524 PQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKK 583
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E DP V+L Y E W+D + R + + G+ K G S +
Sbjct: 584 LLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIE 633
>gi|356532311|ref|XP_003534717.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 755
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 161/542 (29%), Positives = 274/542 (50%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L L+ + LH + D + ++ +Y + +R LFD R
Sbjct: 165 VLSLLFGVSELAHVQCLHGCAILYGFMSDINLSNSMLNVYGKCGNIEYSRKLFDYMDHRD 224
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WNS+I AYA + L K + + T+ + + +L R +HG
Sbjct: 225 LVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSVLSVAASRGELKLGRCLHG 284
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G D+ ++L+ Y K ID A ++F+ SD D+VL +MISG G DK
Sbjct: 285 QILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDVVLWTAMISGLVQNGSADK 344
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L +F ML+ G P T+ +I+ + ++G I G+ L+ + LV+
Sbjct: 345 ALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGYILRQELPLDVATQNSLVT 404
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C ++ + VF+ + DLV+W+A++TGY+Q G +AL+ F ++ + D +
Sbjct: 405 MYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQNGYVCEALFLFNEMRSDNQTPDSIT 464
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I S+L A + + G IH +VI++G ++V ++LVDMY KCG L + F M
Sbjct: 465 IVSLLQGCASTGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDTAQRCFNQMP 524
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++++++++I+G G HG A F+ +E G+ P+ F ++L +C H GLV G
Sbjct: 525 SHDLVSWSAIIVGYGYHGKGEAALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLN 584
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS-FIWSLPKPVDPAVSGALLSCCHI 487
I+ MT+++GI EH+ +V LL AG +EEAY+ + P PV V G +L C
Sbjct: 585 IYESMTKDFGIAPDLEHHACVVDLLSRAGRVEEAYNVYKKKFPDPV-LDVLGIILDACRA 643
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
GN++L + +A+ + P V L++ YA +W++V + + GL+K G S
Sbjct: 644 NGNNELGDTIANDILMLRPMDAGNFVQLAHCYASINKWEEVGEAWTYMRSLGLKKIPGWS 703
Query: 548 WV 549
++
Sbjct: 704 FI 705
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 204/405 (50%), Gaps = 3/405 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH + + L D + A+ L+ YA AR +FD P+R+V W +II Y+ R
Sbjct: 83 LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGR 142
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A SLF + R ++P + T + SE L ++ +HG AI+ G D S++
Sbjct: 143 VPEAFSLFDEMRRQGIQPSSVTVLSLLFGVSE---LAHVQCLHGCAILYGFMSDINLSNS 199
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
++ Y K I+ + K+FD + DLV NS+IS +A G + L L M G
Sbjct: 200 MLNVYGKCGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAG 259
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T ++S L +G+ +HG L++ F +V + L+ +Y + ++ A+ +F
Sbjct: 260 PQTFGSVLSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFE 319
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
D+V W+A+I+G Q G KAL FR++ G K +ASV+ A A+ +
Sbjct: 320 RSSDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNL 379
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G I GY+++ L V ++LV MY+KCG+L VF+ M+ R+++++N+++ G
Sbjct: 380 GTSILGYILRQELPLDVATQNSLVTMYAKCGHLDQSSIVFDMMNRRDLVSWNAMVTGYAQ 439
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G+ +A F ++ PD T +LL C G ++ G+ I
Sbjct: 440 NGYVCEALFLFNEMRSDNQTPDSITIVSLLQGCASTGQLHLGKWI 484
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 210/391 (53%), Gaps = 6/391 (1%)
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N+ I ++ + + + ++L+T + D +T+ + +ACS + +H +V
Sbjct: 30 NATINHHSTQGAHHQVLATYASMLKTHVPSDAYTFPSLLKACSFLNLFSLGLTLHQRILV 89
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
SGL D+ +S+L+ Y+K D A KVFD + + ++V ++I ++ G ++ L
Sbjct: 90 SGLSLDAYIASSLINFYAKFGFADVARKVFDYMPERNVVPWTTIIGCYSRTGRVPEAFSL 149
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
FD M R G P T++ L+ G+ E L+ Q +HG + F S +S+ ++++Y +
Sbjct: 150 FDEMRRQGIQPSSVTVLSLLFGVSE---LAHVQCLHGCAILYGFMSDINLSNSMLNVYGK 206
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C + + +F+ + H DLV+W++LI+ Y+Q G+ + L + + +QG +A P SV
Sbjct: 207 CGNIEYSRKLFDYMDHRDLVSWNSLISAYAQIGNICEVLLLLKTMRLQGFEAGPQTFGSV 266
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+ AA + G +HG +++ GF L V ++L+ +Y K G + + ++FE S++++
Sbjct: 267 LSVAASRGELKLGRCLHGQILRAGFYLDAHVETSLIVVYLKGGKIDIAFRMFERSSDKDV 326
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+ + ++I GL +G +A FR +++ G+ P +T ++++ AC G N G I
Sbjct: 327 VLWTAMISGLVQNGSADKALAVFRQMLKFGVKPSTATMASVITACAQLGSYNLGTSILGY 386
Query: 433 -MTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ +E + T++ +V + G+L+++
Sbjct: 387 ILRQELPLDVATQN--SLVTMYAKCGHLDQS 415
>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 828
Score = 274 bits (700), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 163/579 (28%), Positives = 291/579 (50%), Gaps = 32/579 (5%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F FL+ SK + S ++H +V K L++D F A L+ YA + R +FD
Sbjct: 123 FTFPFLLSACSKI-MAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFD 181
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ +R+V W S+I Y++ + +A LF ++ ++P+ T C AC++ DL
Sbjct: 182 EMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLEL 241
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ V G+ +++ +AL+ Y K + ++FD SD +LV+ N+++S +
Sbjct: 242 GKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQ 301
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G + L + D ML+ G+ PD+ T++ I+ + LSVG+ H + ++ + D +
Sbjct: 302 HGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNI 361
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF-------- 294
S+ ++ MY +C +A VF+S+ + +VTW++LI G + G+ AL F
Sbjct: 362 SNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNL 421
Query: 295 -----------------------RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
R++ QG K D V + + +A + I+ Y
Sbjct: 422 VSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTY 481
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+ ++ + + + +ALVDM+S+CG ++VFE M +R++ + + I + G A
Sbjct: 482 IEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGA 541
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
E F +++++ + D+ F ALL A HGG V+ GR++F M + +G+ + HY MV
Sbjct: 542 IELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVD 601
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
LLG AG LEEA+ + S+P + + G+ L+ C + N + A ++ + P K
Sbjct: 602 LLGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGI 661
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+LSN YA G+W+DV ++R + + G +K AG S +
Sbjct: 662 HVLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIE 700
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/451 (25%), Positives = 222/451 (49%), Gaps = 13/451 (2%)
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDL 120
D+ + S++ N++IR YA + +A ++ +++ + PDNFT+ + ACS+
Sbjct: 79 DEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAF 138
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
VHG + GL +D +++L+ Y+ +D KVFD + + ++V S+I+G+
Sbjct: 139 SEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGKVDLGRKVFDEMLERNVVSWTSLINGY 198
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
+ +++ LF M+ +G P+ T+V IS + L +G+ + + S
Sbjct: 199 SVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVCNLMTELGVKSNT 258
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + L+ MY +C M + +F+ +LV ++ +++ Y Q G G+ L ++ +
Sbjct: 259 LVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMYNTIMSNYVQHGLAGEVLVVLDEMLQK 318
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G++ D V + S +AA A+ ++ G H YV ++G E +S+A++DMY KCG
Sbjct: 319 GQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGKREAA 378
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF++MS + ++T+NS+I GL G A F ++ E L +++ ++ A
Sbjct: 379 CKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNL----VSWNTMIGAMVQA 434
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA---YSFIWSLPKPVDPAV 477
+ + ++ M + GI+ + + G G L+ A Y++I +D +
Sbjct: 435 SMFEEAIDLLREMQNQ-GIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQL 493
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
AL+ G+ + A ++FEN ++
Sbjct: 494 GTALVDMFSRCGDP----LNAMRVFENMEKR 520
>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 267/544 (49%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
+VL+ S L KE HA V K + D T LV +Y + AR +FD +
Sbjct: 166 LIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYK 225
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R V +N +I YA + A LF + + KP+ ++ I CS L + V
Sbjct: 226 RDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAV 285
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + +GL D ++AL+ Y I+ A +VFD + D+V MI G+A
Sbjct: 286 HAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNI 345
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ + LF M G PD T + +I+ + LS+ + IH +++ F + V + L
Sbjct: 346 EDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLVDTAL 405
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MYA+C + A VF+++ D+V+WSA+I Y + G +A F + + D
Sbjct: 406 VHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDV 465
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V ++L A + G I+ I+ + V +AL++M K G + +FE
Sbjct: 466 VTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERARYIFEN 525
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M +R+++T+N +I G LHG +A + F ++++ P+ TF +L AC G V +G
Sbjct: 526 MVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAGFVEEG 585
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
R F+ + + GI E Y MV LLG AG L+EA I +P + ++ LL+ C
Sbjct: 586 RRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTLLAACR 645
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
IYGN D+AE A + ++P GA V LS+ YA G W++V K+R + G+RKE G
Sbjct: 646 IYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVRKEQGC 705
Query: 547 SWVS 550
+W+
Sbjct: 706 TWIE 709
Score = 211 bits (537), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 204/389 (52%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L++L+++ + AR FD ++V WN+II YA +A +LF+ ++ ++P
Sbjct: 102 LIKLHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPS 161
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
T+ + ACS + L + H I G D +ALV+ Y K +D A +VFD
Sbjct: 162 IITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFD 221
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
G+ D+ N MI G+A G +K+ QLF M + G P+ + + ++ G P L+
Sbjct: 222 GLYKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAW 281
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +H C+ + V++ L+ MY C + A VF+ + D+V+W+ +I GY++
Sbjct: 282 GKAVHAQCMNTGLVDDVRVATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAE 341
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+ A F + +G + D + ++ A A SA++ IH V++ GF ++V
Sbjct: 342 NSNIEDAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLLV 401
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
+ALV MY+KCG + QVF+ MS R++++++++I +G +AFE F + +
Sbjct: 402 DTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNV 461
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTR 432
PD T+ LL AC H G ++ G EI+T+
Sbjct: 462 EPDVVTYINLLNACGHLGALDLGMEIYTQ 490
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 160/333 (48%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D+ TY + + C D + V I SG + + L+ +S + EA + F
Sbjct: 60 DSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHSICGNMLEARQTF 119
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D V + +V N++I+G+A G ++ LF M+ P T + ++ P+ L
Sbjct: 120 DSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLK 179
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G+ H +K F S + + LVSMY + M+ A VF+ L+ D+ T++ +I GY+
Sbjct: 180 LGKEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGLYKRDVSTFNVMIGGYA 239
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ GD KA F ++ +G K + + S+L + + G +H + G V
Sbjct: 240 KSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVR 299
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V++AL+ MY CG + +VF+ M R+++++ +I G + AF F + E+G
Sbjct: 300 VATALIRMYMGCGSIEGARRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEG 359
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+ PD T+ ++ AC ++ REI +++
Sbjct: 360 IQPDRITYIHIINACASSADLSLAREIHSQVVR 392
>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 878
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 177/561 (31%), Positives = 283/561 (50%), Gaps = 37/561 (6%)
Query: 23 KELHALVAKASLL---RDPFYATKLVRLYALNNVLPSARILFDKTPQR------SVFLWN 73
+E HA K L R+ F L+ +YA ++ A+ LF T V WN
Sbjct: 192 REAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWN 251
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV- 132
++I R +A + +++ ++PD T+A ACS L R +H A+V
Sbjct: 252 TMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMH--AVVL 309
Query: 133 --SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP--DLVLCNSMISGFAHCGFWDK 188
+ L +S +SALV Y+ + A +VFD V +P L + N+MI G+A G ++
Sbjct: 310 KDADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEE 369
Query: 189 SLQLFDWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+L+LF M G P E T+ G++ + + +HG+ +K +V + L+
Sbjct: 370 ALELFSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALM 429
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM-------- 299
MYAR M+ A +F + D+V+W+ LITG QG +A ++ +
Sbjct: 430 DMYARLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSS 489
Query: 300 ------QGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
+ + P + + ++L A A G IHGY ++H E + V SALVDMY
Sbjct: 490 STTEEGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMY 549
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTF 410
+KCG L VF+ + RN+IT+N +I+ G+HG +A F ++ G P+E TF
Sbjct: 550 AKCGCLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTF 609
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
A L AC H GLV+ G E+F M ++G++ + + +V +LG AG L+EAYS I S+
Sbjct: 610 IAALAACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSM- 668
Query: 471 KPVDPAVSG--ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDV 528
+P + VS +LL C ++ N +L E+ A +LFE +P + ++ V+L N Y+ G WD
Sbjct: 669 EPGEQQVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKS 728
Query: 529 MKLRDDIVDNGLRKEAGVSWV 549
+ +R + G+ KE G SW+
Sbjct: 729 VAVRVRMRRQGVAKEPGCSWI 749
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 136/307 (44%), Gaps = 34/307 (11%)
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLI---SGLWEPSLLSVG 224
D V NS+IS W+++L ML G+ +TLV ++ S L +G
Sbjct: 132 DAVSYNSLISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLG 191
Query: 225 QGIHGFCLKSSF---DSYDYVSSVLVSMYARCNCMNSAYHVFNSL---FHP---DLVTWS 275
+ H F LK F + + L+SMYAR ++ A +F + F P D+VTW+
Sbjct: 192 REAHAFALKRGFLDEGRERFPFNALLSMYARLGLVDDAQSLFRTTAAAFSPGGGDVVTWN 251
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I+ Q G +A+ + G + D V AS L A ++ + G +H V++
Sbjct: 252 TMISLLVQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKD 311
Query: 336 G-FELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITYNSVILGLGLHGFTYQAF 392
+ V+SALVDMY+ + +VF+ + E R + +N++I G G +A
Sbjct: 312 ADLAANSFVASALVDMYAGNEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAGMDEEAL 371
Query: 393 EFF-RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
E F R E G P E+T S +L AC G K + Y+VK
Sbjct: 372 ELFSRMEAEAGCAPSETTMSGVLPAC----------------ARSEGFAGKEAMHGYVVK 415
Query: 452 LLGLAGN 458
G+AGN
Sbjct: 416 -RGMAGN 421
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 116/293 (39%), Gaps = 26/293 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + + +H V K + + F L+ +YA + AR +F R
Sbjct: 393 VLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYARLGEMDVARRIFAMIDPRD 452
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK-------------------PDNFTYAC 109
V WN++I + A F+ + QL P+N T
Sbjct: 453 VVSWNTLITGCVVQ---GHAAEAFQLVTEMQLPSPSPSSSSTTEEGEAHRCMPNNITLMT 509
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ C+ + + +HG A+ L D SALV Y+K + + VFD + +
Sbjct: 510 LLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCGCLAASRAVFDRLPRRN 569
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVG-QGI 227
++ N +I + G D+++ LFD M G+ TP+E T + ++ L+ G +
Sbjct: 570 VITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAALAACSHSGLVDRGLELF 629
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF--HPDLVTWSALI 278
HG + + +V + R ++ AY + S+ + WS+L+
Sbjct: 630 HGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQQVSAWSSLL 682
>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Cucumis sativus]
Length = 695
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/575 (29%), Positives = 280/575 (48%), Gaps = 68/575 (11%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLL-RDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
LVLE ++++ +++ K L + + D F +L+ LYA L A+ LFDK +
Sbjct: 28 LVLECVRTNE-INQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLK 86
Query: 67 RSVFLWNSIIRAYALAHRFNDAKS-------------------------------LFKNL 95
R +F WN+++ AYA + + K+ LFK +
Sbjct: 87 RDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRM 146
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R +P +T I A ++ SDL + +HG IV + +AL Y+K I
Sbjct: 147 QREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
++A +FD ++ +LV N MISG+A G +K + L M G PD+ T+
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM------- 259
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S +++ Y +C ++ A VF+ D+V W+
Sbjct: 260 ----------------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVCWT 291
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A++ GY++ G AL F ++ ++ + D ++SV+++ AK A++ G +HG I
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA 351
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G +++VSSAL+DMYSKCG++ VF M RN++++N++I+G +G A E F
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
+++++ PD TF +L AC H + G+E F +T ++G+ +HY MV LLG
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVNLLGR 471
Query: 456 AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
G +E+A + I ++ D + LLS C G+ AE+ A LFE DP +ML
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIML 531
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
SN YA GRW DV +R+ + ++K AG SW+
Sbjct: 532 SNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIE 566
>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 720
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 278/536 (51%), Gaps = 4/536 (0%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
+S+S K + A + K+ + +KLV + AR LFD P+R + WNSI
Sbjct: 60 ERSISGIKNIQAQMLKSGFPVE-LSGSKLVDASLKCGEIGYARQLFDGMPERHIVTWNSI 118
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I Y R +A +++ ++ + PD +T + + +A S+ S + HG A++ GL
Sbjct: 119 IAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILGL 178
Query: 136 GRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
++ SALV Y K EA V D V + D+VL ++I G++ G ++++ F
Sbjct: 179 EVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAFQ 238
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
ML P+EYT ++ + G+ IHG +KS F+S + L++MY RC+
Sbjct: 239 SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCS 298
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ + VF + +P+ VTW++LI+G Q G AL FRK+ K + ++S L
Sbjct: 299 LVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRKMMRDSVKPNSFTLSSALR 358
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+ A G +HG V ++GF+ S L+++Y KCG + VF+T+SE ++I+
Sbjct: 359 GCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCSDMARLVFDTLSEVDVIS 418
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
N++I +GF +A E F +I GL P++ T ++L AC + GLV +G E+F
Sbjct: 419 LNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFR 478
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++ I +HY MV +LG AG LEEA I + P D + LLS C ++ ++A
Sbjct: 479 KD-KIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNP-DLVLWRTLLSACKVHRKVEMA 536
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E + ++ E P ++LSN YA G+W V++++ + + L+K +SWV
Sbjct: 537 ERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMKEMKLKKNPAMSWVE 592
>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
Length = 784
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 252/445 (56%), Gaps = 3/445 (0%)
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
+ +T S+ + G R VH I + + L+ Y+K + +A +V D + +
Sbjct: 15 SVLTECISQTAIREGQR-VHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE 73
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
++V +MISG++ G+ ++L LF ML G P+E+T +++ S +G+ I
Sbjct: 74 RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 133
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
H +K+SF+S+ +V S L+ MYA+ + A VF+ L D+V+ +A+I+GY+Q G
Sbjct: 134 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 193
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
+AL FR+L +G +++ V ASVL A + A + G +H +V++ V++ ++L
Sbjct: 194 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 253
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPD 406
+DMYSKCG L ++F++M ER +I++N++++G HG +A E F+ + E+ + PD
Sbjct: 254 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 313
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEY-GIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
TF A+L C HGG+ + G EIF M + G + + EHY +V L G AG +EEA+ F
Sbjct: 314 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 373
Query: 466 IWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRW 525
I +P A+ G+LL C ++ N + E VA +L E + V+LSN YA GRW
Sbjct: 374 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 433
Query: 526 DDVMKLRDDIVDNGLRKEAGVSWVS 550
DDV +R+ + + + KE G SW+
Sbjct: 434 DDVRTVRELMKEKAVIKEPGRSWIE 458
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 178/362 (49%), Gaps = 3/362 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++ + +HA + K + T+L+ LY L AR + D+ P+R+
Sbjct: 16 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 75
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I Y+ ++A LF +L + P+ FT+A + +C+ +S R +H
Sbjct: 76 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 135
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + S+L+ Y+K I EA +VFDG+ + D+V C ++ISG+A G ++
Sbjct: 136 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 195
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF + R G + T +++ L + L G+ +H L++ Y + + L+
Sbjct: 196 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 255
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MY++C + + +F+S+ +++W+A++ GYS+ G +A+ F+ + + K K D V
Sbjct: 256 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 315
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+VL+ + G I ++ GFE + +VD++ + G + + +
Sbjct: 316 TFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEFIK 375
Query: 366 TM 367
M
Sbjct: 376 KM 377
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 134/300 (44%), Gaps = 5/300 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H+LV K S F + L+ +YA + AR +FD P+R V +II YA
Sbjct: 131 RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQL 190
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF+ L R ++ + TYA + A S + L R VH + + L +
Sbjct: 191 GLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQ 250
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ YSK + + ++FD + + ++ N+M+ G++ G ++++LF M K
Sbjct: 251 NSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKV 310
Query: 203 -PDEYTLVGLISGLWEPSLLSVGQGI--HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
PD T + ++SG + G I K F+ +V ++ R + A
Sbjct: 311 KPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEA 370
Query: 260 YHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKADPVLIASVLAAAA 317
+ + F P W +L+ + + R+ L ++ + A +I S L A+A
Sbjct: 371 FEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASA 430
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ +QG + + SVL + G +H ++I+ +E V + + L+ +Y+KC
Sbjct: 1 MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
LG +V + M ERN++++ ++I G G+ +A F +++ G P+E TF+ +L +
Sbjct: 61 LGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTS 120
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPK 471
C GR+I + + I+ E +I+ ++ + AG + EA LP+
Sbjct: 121 CTSSSGFQLGRQIHSLV-----IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 174
>gi|15231917|ref|NP_188091.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274207|sp|Q9LUC2.1|PP231_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14730
gi|9294394|dbj|BAB02404.1| unnamed protein product [Arabidopsis thaliana]
gi|332642039|gb|AEE75560.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 653
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/533 (30%), Positives = 278/533 (52%), Gaps = 8/533 (1%)
Query: 23 KELHALVAKASLLRD-PFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+++H + + L D P T LV +YA ++ A ++F + +R VF +N++I + +
Sbjct: 80 QQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-ERDVFGYNALISGFVV 138
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
DA ++ + + PD +T+ + + S+ +L ++ VHG A G D
Sbjct: 139 NGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLGFDSDCYV 197
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
S LVT+YSK +++A KVFD + D D VL N++++G++ ++ +L +F M G
Sbjct: 198 GSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEG 257
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+T+ ++S + G+ IHG +K+ S VS+ L+ MY + + A
Sbjct: 258 VGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEAN 317
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F ++ DL TW++++ + GD+ L F ++ G + D V + +VL + A
Sbjct: 318 SIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLA 377
Query: 321 NVWPGAVIHGYVIQHGF----ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
++ G IHGY+I G + + ++L+DMY KCG L VF++M ++ ++N
Sbjct: 378 SLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWN 437
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+I G G+ A + F + G+ PDE TF LL AC H G +N+GR +M
Sbjct: 438 IMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETV 497
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y I ++HY ++ +LG A LEEAY S P +P V ++LS C ++GN DLA +
Sbjct: 498 YNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSILSSCRLHGNKDLALV 557
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L E +P V++SN Y E G++++V+ +RD + ++K G SW+
Sbjct: 558 AGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 5/307 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR-SVFLWNSIIR 77
LS K++H L K D + + LV Y+ + A+ +FD+ P R LWN+++
Sbjct: 176 LSDVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y+ RF DA +F + + T + A + + D+ R +HG A+ +G G
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGS 295
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + S+AL+ Y K ++EA +F+ + + DL NS++ +CG D +L LF+ ML
Sbjct: 296 DIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML 355
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF----DSYDYVSSVLVSMYARC 253
G PD TL ++ + L G+ IHG+ + S S +++ + L+ MY +C
Sbjct: 356 CSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKC 415
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ A VF+S+ D +W+ +I GY Q AL F + G K D + +L
Sbjct: 416 GDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLL 475
Query: 314 AAAAKSA 320
A + S
Sbjct: 476 QACSHSG 482
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 62/105 (59%), Gaps = 2/105 (1%)
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+ L A+ + G IHG++++ GF + S ++LV+MY+KCG + + VF SE
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SE 123
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
R++ YN++I G ++G A E +R++ G+ PD+ TF +LL
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL 168
>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
chloroplastic [Vitis vinifera]
gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
Length = 893
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 168/527 (31%), Positives = 276/527 (52%), Gaps = 4/527 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLP-SARILFDKTPQRSVFLWNSIIRAYALA 82
+LH+ + K D ++ L+ +Y+ V+ S R+ + +++ +W +I A+A +
Sbjct: 370 QLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWAVMISAFAQS 429
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A LF+ +L+ L+PD F C + S L R +H + GL D
Sbjct: 430 GSTGRAVELFQRMLQEGLRPDKF---CSSSVLSIIDSLSLGRLIHCYILKIGLFTDISVG 486
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
S+L T YSK ++E+ VF+ + D D V SMI+GF+ ++++QLF ML
Sbjct: 487 SSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIR 546
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ TL ++ L G+ +HG+ L++ V LV+MY++C + A V
Sbjct: 547 PDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRV 606
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ L D + S+L++GY+Q G AL F ++ M D ++SV+ A A ++
Sbjct: 607 FDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSL 666
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H V + G V V S+LV MYSKCG + +VFE + + ++I++ ++I+
Sbjct: 667 DIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIEKPDLISWTAMIVSY 726
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A + + + ++G PD TF +L AC H G+V +G M +EYGI+
Sbjct: 727 AQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPG 786
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
HY MV LLG +G L+EA FI ++P D + G LL+ C ++G+ +L + A ++
Sbjct: 787 YYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLWGILLAACKVHGDIELGRLAAKRVI 846
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E +P + V LSN A+ G W+DVMK+R + G++KE G S V
Sbjct: 847 ELEPCEAGAYVTLSNICADMGWWEDVMKIRSLMEGTGVKKEPGWSSV 893
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 117/416 (28%), Positives = 206/416 (49%), Gaps = 4/416 (0%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARIL 60
F HF +L TK LHA K ++L+ + F L+ Y +N + A L
Sbjct: 44 FDPFHFFSDYTKSGRCTLRNTKILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRL 103
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSD 119
FDKTP +V WN +I F D+ F + + P+ FTY + AC+ S
Sbjct: 104 FDKTPHPNVISWNILISGCNQNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSP 163
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L G V+ A+ +G + + ++ ++KL ++A++VF V ++V N++ISG
Sbjct: 164 LYG-ELVYSLALKNGFFSNGYVRAGMIDLFAKLCSFEDALRVFQDVLCENVVCWNAIISG 222
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+L LF M P+ +T +++ L G+G+ G+ +K
Sbjct: 223 AVKNRENWVALDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGED 282
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+V + ++ +YA+C M+ A F + ++V+W+ +I+G+ Q+ D A ++F+++
Sbjct: 283 VFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRK 342
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G+K + I SVL A + + +H ++ + GF L VSSAL++MYSK G + L
Sbjct: 343 VGEKINNYTITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDL 402
Query: 360 GIQVFETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+VF M S +N+ + +I G T +A E F+ ++++GL PD+ S++L
Sbjct: 403 SERVFREMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL 458
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 2/371 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SLS + +H + K L D + L +Y+ L + +F++ P + W S+I
Sbjct: 463 SLSLGRLIHCYILKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMIT 522
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
++ A LF+ +L +++PD T ACS L + VHG A+ + +G+
Sbjct: 523 GFSEHDHAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARVGK 582
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ + ALV YSK I A +VFD + D C+S++SG+A G+ + +L LF +
Sbjct: 583 EVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIR 642
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
D +T+ +I + + L +G +H K ++ V S LV+MY++C ++
Sbjct: 643 MADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGSID 702
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+ VF + PDL++W+A+I Y+Q G +AL + + +G K D V VL+A +
Sbjct: 703 ECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSACS 762
Query: 318 KSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITY 375
+ V G + ++ ++G E + +VD+ + G L + M E + + +
Sbjct: 763 HNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDALLW 822
Query: 376 NSVILGLGLHG 386
++ +HG
Sbjct: 823 GILLAACKVHG 833
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 189/409 (46%), Gaps = 35/409 (8%)
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L ++ +++L+ Y K + + A+++FD P+++ N +ISG ++ S + F
Sbjct: 77 LQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHPNVISWNILISGCNQNFSFEDSWRNFC 136
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G P+++T ++S G+ ++ LK+ F S YV + ++ ++A+
Sbjct: 137 KMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLC 196
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
A VF + ++V W+A+I+G + + AL F ++ + + +S+L
Sbjct: 197 SFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILT 256
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A + G + G+VI+ G V V +A++D+Y+KC + ++ F M RN+++
Sbjct: 257 ACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMDQAVKEFLRMPIRNVVS 316
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ ++I G + AF FF+++ + G + T +++L AC ++ + ++
Sbjct: 317 WTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQL----- 371
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+S+I+ +D VS AL++ G DL+
Sbjct: 372 ----------------------------HSWIFKTGFYLDSNVSSALINMYSKIGVVDLS 403
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
E V ++ E+ + VM+S +A+ G ++L ++ GLR +
Sbjct: 404 ERVFREM-ESTKNLAMWAVMIS-AFAQSGSTGRAVELFQRMLQEGLRPD 450
>gi|449484072|ref|XP_004156776.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 754
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 278/532 (52%), Gaps = 6/532 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K LH L K L + ++ +Y+ A F K Q+ + W SII
Sbjct: 225 ALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIA 284
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
++ ++ LF + +++ PD +C+ + + + H +
Sbjct: 285 VHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCAL 344
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
IT +AL++ Y K + A K+F S D ++MI G+++ G +K +
Sbjct: 345 SGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDW---STMILGYSNMGQKEKCISFLRE 401
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
ML LG+ PD +LV +IS + +++G+ IH + +K+S V++ L+ MY +
Sbjct: 402 MLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGH 461
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ + + +F+ D+++W+ LI+ Y Q G +A+ F K+ + + V VL+A
Sbjct: 462 VTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSA 521
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A A++ G IH Y+ ++GFE ++ + +AL+DMY+KCG L ++F + ER++I +
Sbjct: 522 CAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILW 581
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N +I G+HG A E F+ + E + P+ TF +LL AC H G V +GR +F RM +
Sbjct: 582 NVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRM-Q 640
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+YGI+ +HY ++ LLG +G+LE A + + S+P D V G+LLS C I+ ++
Sbjct: 641 KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGV 700
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+A E+DP+ Y ++LS+ Y+ GRWD+V K+RD + G+ K AG S
Sbjct: 701 RLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 752
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 196/408 (48%), Gaps = 6/408 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
H+L+ + F+ATKL+ YA + + LF + +FLWNSII+++
Sbjct: 29 FHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFLWNSIIQSHFSNGD 88
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR---DSIT 141
+ A + + + P+ FT + C+E +HG + S LG +S
Sbjct: 89 YQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHG--LTSKLGLFVGNSAI 146
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
S+ + YSK ++ A +F ++ D+V ++I G+ + L+ M R+G
Sbjct: 147 GSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGLKCLFEMHRIGG 206
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
TP+ T+ + L G+ +HG LK+ F ++ V S ++SMY+RC AY
Sbjct: 207 TPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYR 266
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F L DL++W+++I +S+ G + L+ F ++ D ++I+ +L S
Sbjct: 267 CFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDR 326
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
++ G H +++ LS + +AL+ MY K G+LG ++F + ++ ++++ILG
Sbjct: 327 IFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF-HKSSEDWSTMILG 385
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
G + F R+++ G PD ++ +++ +C G +N GR I
Sbjct: 386 YSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRSI 433
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 146/325 (44%), Gaps = 2/325 (0%)
Query: 114 CSENSDLPGLRF-VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
C + D +RF H I +G + ++ L+ Y+ + +F + D+ L
Sbjct: 16 CQGDFDKLLIRFWFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFL 75
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
NS+I G + ++ + M P+++T+ ++S E + + G IHG
Sbjct: 76 WNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHGLTS 135
Query: 233 KSS-FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
K F + S + MY++C + SA +F+ + D+VTW+ALI GY Q + G+ L
Sbjct: 136 KLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGRGL 195
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
+++ G + I S A + G +HG +++GF +V S ++ MY
Sbjct: 196 KCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILSMY 255
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
S+CG + F + ++++I++ S+I G + F ++ + PDE S
Sbjct: 256 SRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIVIS 315
Query: 412 ALLCACCHGGLVNDGREIFTRMTEE 436
+L + + +G+ R+ ++
Sbjct: 316 CMLMGFGNSDRIFEGKAFHARILKQ 340
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL SL +++H + + + T L+ +YA L ++R LF+ T +R
Sbjct: 517 IVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEER 576
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V LWN +I Y + A +F+ + + +KP+ T+ + AC+
Sbjct: 577 DVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACN 624
>gi|449442767|ref|XP_004139152.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Cucumis sativus]
Length = 743
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 257/513 (50%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D + +V +Y + AR LF R + WNS++ AY+ + L + +
Sbjct: 181 DLALSNSMVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMK 240
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+KPD T+ A + DL + VHG + GL D SALV Y + +D
Sbjct: 241 IEDIKPDKQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLD 300
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A KVF ++ D+V+ +MISG DK+L +F M+ P TL ++
Sbjct: 301 PAYKVFKSTTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACA 360
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
+ +G IHG+ L+ + LV+MYA+CN + + +FN + DLV+W+A
Sbjct: 361 QLGCCDIGASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNA 420
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
++ G+++ G K +++F ++ + D + + S+L A + + G IH +V++
Sbjct: 421 IVAGHAKNGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWIHNFVLRSS 480
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+M +ALVDMY KCG L + F+ M +R+++ ++++I+G G +G A +
Sbjct: 481 LIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYS 540
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+ + G+ P+ F ++L AC HGGL++ G I+ MT+++ + EH +V LL A
Sbjct: 541 EFLGTGMEPNHVIFISVLSACSHGGLISKGLSIYESMTKDFRMSPNLEHRACVVDLLSRA 600
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G ++EAYSF + K V G LL C + G +L +++A +FE P V L+
Sbjct: 601 GKVDEAYSFYKMMFKEPSIVVLGMLLDACRVNGRVELGKVIARDMFELKPVDPGNFVQLA 660
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N+YA RWD V K + GL+K G S +
Sbjct: 661 NSYASMSRWDGVEKAWTQMRSLGLKKYPGWSSI 693
Score = 194 bits (493), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 124/405 (30%), Positives = 203/405 (50%), Gaps = 3/405 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH V L D + + L+ YA + R +FD +R+V W +II +Y+
Sbjct: 71 LHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGD 130
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ A S+FK + + ++P + T + S+ LP L +H I+ G D S++
Sbjct: 131 IDIAFSMFKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNS 187
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
+V Y K I +A ++F + D+V NS++S ++ G ++ LQL M PD
Sbjct: 188 MVNMYGKCGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPD 247
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+ T +S L +G+ +HG LK + +V S LV +Y RC C++ AY VF
Sbjct: 248 KQTFCSALSASAIKGDLRLGKLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFK 307
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S D+V W+A+I+G Q KAL F ++ K +AS LAA A+
Sbjct: 308 STTEKDVVMWTAMISGLVQNDCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDI 367
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
GA IHGYV++ G L + ++LV MY+KC L +F M E++++++N+++ G
Sbjct: 368 GASIHGYVLRQGIMLDIPAQNSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAK 427
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G+ + FF ++ + L PD T ++LL AC G + G+ I
Sbjct: 428 NGYLSKGIFFFNEMRKSFLRPDSITVTSLLQACGSAGALCQGKWI 472
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 177/387 (45%), Gaps = 5/387 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H L+ K L D + LV LY L A +F T ++ V +W ++I
Sbjct: 268 KLVHGLMLKDGLNIDQHVESALVVLYLRCRCLDPAYKVFKSTTEKDVVMWTAMISGLVQN 327
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A +F ++ + +KP T A AC++ +HG + G+ D
Sbjct: 328 DCADKALGVFYQMIESNVKPSTATLASGLAACAQLGCCDIGASIHGYVLRQGIMLDIPAQ 387
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LVT Y+K + + ++ +F+ + + DLV N++++G A G+ K + F+ M +
Sbjct: 388 NSLVTMYAKCNKLQQSCSIFNKMVEKDLVSWNAIVAGHAKNGYLSKGIFFFNEMRKSFLR 447
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T+ L+ L G+ IH F L+SS + LV MY +C + +A
Sbjct: 448 PDSITVTSLLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKC 507
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + DLV WS LI GY G AL + + G + + V+ SVL+A + +
Sbjct: 508 FDCMLQRDLVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACSHGGLI 567
Query: 323 WPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETM-SERNIITYNSVI 379
G I+ + + F +S + + +VD+ S+ G + ++ M E +I+ ++
Sbjct: 568 SKGLSIYESMTKD-FRMSPNLEHRACVVDLLSRAGKVDEAYSFYKMMFKEPSIVVLGMLL 626
Query: 380 LGLGLHGFTYQAFEFFRDIIE-KGLNP 405
++G RD+ E K ++P
Sbjct: 627 DACRVNGRVELGKVIARDMFELKPVDP 653
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 132/267 (49%), Gaps = 14/267 (5%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
NS++S ++ G + LQ + M + D YT L +L S G +H +
Sbjct: 18 NSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNLFSHGLSLHQSVVV 77
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ Y+ S L+S YA+ C++ VF+++ ++V W+ +I YS++GD A
Sbjct: 78 NGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGSYSREGDIDIAFSM 137
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F+++ G + V + S+L +K + +H +I HGFE + +S+++V+MY K
Sbjct: 138 FKQMRESGIQPTSVTLLSLLPGISK---LPLLLCLHCLIILHGFESDLALSNSMVNMYGK 194
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + ++F+++ R+I+++NS++ G T + + + + + + PD+ TF +
Sbjct: 195 CGRIADARRLFQSIDCRDIVSWNSLLSAYSKIGATEEILQLLQAMKIEDIKPDKQTFCSA 254
Query: 414 LCACC-----------HGGLVNDGREI 429
L A HG ++ DG I
Sbjct: 255 LSASAIKGDLRLGKLVHGLMLKDGLNI 281
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%)
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+ S+ H ++++L++ S QG + + L + + + D S+ A
Sbjct: 5 IHESIAHGCTKSFNSLVSRLSYQGAHHQVLQTYISMQKTHTQLDAYTFPSLFKACTNLNL 64
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G +H V+ +G + S+L+ Y+K G + LG +VF+TM +RN++ + ++I
Sbjct: 65 FSHGLSLHQSVVVNGLSHDSYIGSSLISFYAKFGCIHLGRKVFDTMLKRNVVPWTTIIGS 124
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G AF F+ + E G+ P T +LL
Sbjct: 125 YSREGDIDIAFSMFKQMRESGIQPTSVTLLSLL 157
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 11/127 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S +L + K +H V ++SL+ T LV +Y L +A+ FD QR
Sbjct: 456 LLQACGSAGALCQGKWIHNFVLRSSLIPCIMTETALVDMYFKCGNLENAQKCFDCMLQRD 515
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W+++I Y + A + L T ++P++ + + ACS HG
Sbjct: 516 LVAWSTLIVGYGFNGKGEIALRKYSEFLGTGMEPNHVIFISVLSACS-----------HG 564
Query: 129 GAIVSGL 135
G I GL
Sbjct: 565 GLISKGL 571
>gi|15221304|ref|NP_177599.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169837|sp|Q9CA56.1|PP121_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74600, chloroplastic; Flags: Precursor
gi|12324789|gb|AAG52351.1|AC011765_3 hypothetical protein; 84160-81473 [Arabidopsis thaliana]
gi|332197493|gb|AEE35614.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 895
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 176/530 (33%), Positives = 273/530 (51%), Gaps = 10/530 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++HA V K+ D A L+ +Y+ + ++ S ++ D + + N +I +++ +
Sbjct: 372 QVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQS 431
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRDS 139
+ A LF +L+ L+ D F+ CS S L L VHG + SGL D
Sbjct: 432 KKPGKAIRLFTRMLQEGLRTDEFS------VCSLLSVLDCLNLGKQVHGYTLKSGLVLDL 485
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
S+L T YSK ++E+ K+F G+ D SMISGF G+ +++ LF ML
Sbjct: 486 TVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDD 545
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G +PDE TL +++ L G+ IHG+ L++ D + S LV+MY++C + A
Sbjct: 546 GTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLA 605
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
V++ L D V+ S+LI+GYSQ G FR + M G D I+S+L AAA S
Sbjct: 606 RQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALS 665
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
GA +H Y+ + G V S+L+ MYSK G + + F ++ ++I + ++I
Sbjct: 666 DESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALI 725
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
HG +A + + + EKG PD+ TF +L AC HGGLV + M ++YGI
Sbjct: 726 ASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGI 785
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ + HY+ MV LG +G L EA SFI ++ D V G LL+ C I+G +L ++ A
Sbjct: 786 EPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAK 845
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ E +P + LSN AE G WD+V + R + G++KE G S V
Sbjct: 846 KAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 121/476 (25%), Positives = 215/476 (45%), Gaps = 12/476 (2%)
Query: 18 SLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+L TK L A + + LL D F L+ Y+ + + A LFD PQ V N +I
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMI 122
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y F ++ F + + + +Y + ACS V I G
Sbjct: 123 SGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYF 182
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ SAL+ +SK ++A KVF ++ N++I+G + LF M
Sbjct: 183 FYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEM 242
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ PD YT +++ L G+ + +K + +V + +V +YA+C M
Sbjct: 243 CVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDLYAKCGHM 301
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+ + +P +V+W+ +++GY++ D AL F+++ G + + + SV++A
Sbjct: 302 AEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISAC 361
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE---RNII 373
+ + V + +H +V + GF L V++AL+ MYSK G + L QVFE + + +NI+
Sbjct: 362 GRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV 421
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
N +I +A F ++++GL DE + +LL +N G+++
Sbjct: 422 --NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGKQVHG-Y 475
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
T + G+ + L G+LEE+Y +P D A +++S + YG
Sbjct: 476 TLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-DNACWASMISGFNEYG 530
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 191/457 (41%), Gaps = 37/457 (8%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
F V L L+ K++H K+ L+ D + L LY+ L + LF P
Sbjct: 453 EFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIP 512
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ W S+I + +A LF +L PD T A + CS + LP +
Sbjct: 513 FKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKE 572
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG + +G+ + SALV YSK + A +V+D + + D V C+S+ISG++ G
Sbjct: 573 IHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGL 632
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
LF M+ G T D + + ++ S+G +H + K + V S
Sbjct: 633 IQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSS 692
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L++MY++ ++ F+ + PDL+ W+ALI Y+Q G +AL + + +G K D
Sbjct: 693 LLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPD 752
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVF 364
V VL+A + HG +++ F L+ MV ++ ++
Sbjct: 753 KVTFVGVLSACS-----------HGGLVEESYFHLNSMVKDYGIEPENR----------- 790
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
Y ++ LG G +A F ++ + PD + LL AC G V
Sbjct: 791 ---------HYVCMVDALGRSGRLREAESFINNM---HIKPDALVWGTLLAACKIHGEVE 838
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
G+ + E A YI + +L G +E
Sbjct: 839 LGKVAAKKAIELEPSDAGA--YISLSNILAEVGEWDE 873
>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 748
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 175/610 (28%), Positives = 286/610 (46%), Gaps = 64/610 (10%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + +L+L + ++ K LH+ + K + F L+ YA +P A +FD+
Sbjct: 10 NHYCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQ 69
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ------------------------ 99
P +++ WN+I+ AY+ R ++ + LF + R
Sbjct: 70 MPHPNLYSWNTILSAYSKLGRVSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAY 129
Query: 100 ---LKPD------NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS 150
LK D T++ + S+ + R +HG + G S LV YS
Sbjct: 130 NLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYS 189
Query: 151 KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF---------DW------ 195
K+ +I A KVFD + + ++V+ N++I G CG + S +LF W
Sbjct: 190 KMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITG 249
Query: 196 ------------MLRLGKTP----DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ R K D+YT +++ L G+ +H + +++ +
Sbjct: 250 FTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDN 309
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+V+S LV MY +C + SA VF + ++V+W+A++ GY Q G +A+ F +
Sbjct: 310 IFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQK 369
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G + D + SV+++ A A++ GA H + G + VS+ALV +Y KCG +
Sbjct: 370 YGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIED 429
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++F +S ++ +T+ +++ G G + F ++ GL PD+ TF +L AC
Sbjct: 430 SHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACSR 489
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV G +IF M E+GI +HY M+ L AG +EEA +FI +P D
Sbjct: 490 AGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMPFSPDAISWA 549
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
LLS C YGN D+ + A L E DP A V+LS+ YA G+W++V +LR D+ D G
Sbjct: 550 TLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLRKDMRDKG 609
Query: 540 LRKEAGVSWV 549
LRKE G SW+
Sbjct: 610 LRKEPGCSWI 619
>gi|147818712|emb|CAN65041.1| hypothetical protein VITISV_009461 [Vitis vinifera]
Length = 1072
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 289/603 (47%), Gaps = 62/603 (10%)
Query: 7 FLVLELSKSHQSLSRT------KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
F L S+S S R +LHA + L R P +TKL+ YA + S++ +
Sbjct: 343 FFTLNSSRSLTSHKRCATSTTLTQLHAHLFITGLHRHPPASTKLIESYAQIGIFESSKRV 402
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSL----------------------------- 91
FD P+ F+W +I+ Y F +A SL
Sbjct: 403 FDTFPKPDSFMWGVLIKCYVWGGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGD 462
Query: 92 ----------------FKNLLRTQLKPDNFTYACITRACSENSDL--------PGLRFVH 127
F ++ ++PD+ T +T ACSE L R VH
Sbjct: 463 LSVGGKNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRLGRVKEGRSVH 522
Query: 128 GGAIVSGLGRD-SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
G I + + AL+ Y+ + + KVF+ + + ++ N++IS F G
Sbjct: 523 GFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQP 582
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+++L LF M G PD Y+L +S S +G IHG+ +K+ + D+V + L
Sbjct: 583 EEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTG-NFNDFVQNAL 641
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+C ++SA +F + LVTW+++I G+SQ G +A+ F ++ M K D
Sbjct: 642 IDMYAKCGFVHSANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDK 701
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ SV+ A + + G +H +I +G + +AL DMYSKCG L + VF+
Sbjct: 702 LTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 761
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
MSER+I++++ +I G G+HG F ++ G+ P++ TF +L AC H G V +G
Sbjct: 762 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEG 821
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+ F M+ E+G++ K +H+ MV LL AG+L AY I SLP P + ++ GALL+ C
Sbjct: 822 KLYFNSMS-EFGVEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCR 880
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
I+ D+ + + L + D Y +LSN YAE+G WD K+R + GLRK G
Sbjct: 881 IHKRIDIIKSIEKNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGY 940
Query: 547 SWV 549
S +
Sbjct: 941 STI 943
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 5 LHFLVLELSKSHQS-LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
L FL + + SH L + K +H + L +D + T L +Y+ L A +FD+
Sbjct: 702 LTFLSVIQACSHLGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDR 761
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+RS+ W+ +I Y + + N SLF +L + +KP++ T+ I ACS
Sbjct: 762 MSERSIVSWSVMIAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACS-------- 813
Query: 124 RFVHGGAIVSG 134
H GA+ G
Sbjct: 814 ---HAGAVEEG 821
>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g30700; AltName: Full=Protein DYW9
gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 792
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/509 (31%), Positives = 264/509 (51%), Gaps = 4/509 (0%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-L 100
+ +V++Y + AR +FD+ P++ LWN++I Y + ++ +F++L+
Sbjct: 158 SNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCT 217
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+ D T I A +E +L +H A +G + ++ YSK I
Sbjct: 218 RLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSA 277
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
+F PD+V N+MI G+ G + SL LF ++ G TLV L+ L
Sbjct: 278 LFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLML 337
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ IHG+CLKS+F S+ VS+ L ++Y++ N + SA +F+ L +W+A+I+G
Sbjct: 338 I---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISG 394
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y+Q G A+ FR++ +PV I +L+A A+ + G +H V FE S
Sbjct: 395 YTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ VS+AL+ MY+KCG + ++F+ M+++N +T+N++I G GLHG +A F +++
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G+ P TF +L AC H GLV +G EIF M YG + +HY MV +LG AG+L+
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
A FI ++ +V LL C I+ +++LA V+ +LFE DP Y V+LSN ++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
D + +R L K G + +
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLI 663
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 214/420 (50%), Gaps = 5/420 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+ K S+S + HA + D TKL + + + AR +F + V
Sbjct: 24 LDFFKRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDV 83
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHG 128
FL+N ++R +++ + + S+F +L + T LKP++ TYA A S D R +HG
Sbjct: 84 FLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHG 143
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+V G + + S +V Y K +++A KVFD + + D +L N+MISG+ + +
Sbjct: 144 QAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVE 203
Query: 189 SLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
S+Q+F ++ T D TL+ ++ + E L +G IH K+ S+DYV + +
Sbjct: 204 SIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
S+Y++C + +F PD+V ++A+I GY+ G+ +L F++L + G +
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ S++ + ++ IHGY ++ F VS+AL +YSK + ++F+
Sbjct: 324 TLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDES 380
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E+++ ++N++I G +G T A FR++ + +P+ T + +L AC G ++ G+
Sbjct: 381 PEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK 440
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 121/260 (46%), Gaps = 10/260 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H K++ L +T L +Y+ N + SAR LFD++P++S+ WN++I Y
Sbjct: 341 IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGL 400
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
DA SLF+ + +++ P+ T CI AC++ L ++VH + S+A
Sbjct: 401 TEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTA 460
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K I EA ++FD ++ + V N+MISG+ G ++L +F ML G TP
Sbjct: 461 LIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPT 520
Query: 205 EYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
T + ++ L+ G IH + + S Y + +V + R + A
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHY----ACMVDILGRAGHLQRA 576
Query: 260 YHVFNSL-FHPDLVTWSALI 278
++ P W L+
Sbjct: 577 LQFIEAMSIEPGSSVWETLL 596
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 50/98 (51%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+LS K +H LV + +T L+ +YA + AR LFD +++ WN++I
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y L + +A ++F +L + + P T+ C+ ACS
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACS 532
>gi|449460752|ref|XP_004148109.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39952,
mitochondrial-like [Cucumis sativus]
Length = 784
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 278/532 (52%), Gaps = 6/532 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K LH L K L + ++ +Y+ A F K Q+ + W SII
Sbjct: 255 ALVEGKCLHGLALKNGFLCFEVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIA 314
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
++ ++ LF + +++ PD +C+ + + + H +
Sbjct: 315 VHSKFGLMSECLHLFWEMQASEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQCCAL 374
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
IT +AL++ Y K + A K+F S D ++MI G+++ G +K +
Sbjct: 375 SGITHNALLSMYCKFGHLGTANKIFHSFHKSSEDW---STMILGYSNMGQKEKCISFLRE 431
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
ML LG+ PD +LV +IS + +++G+ IH + +K+S V++ L+ MY +
Sbjct: 432 MLLLGREPDLNSLVSVISSCSQVGAINIGRSIHCYAIKNSIIENVSVANSLMDMYGKSGH 491
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ + + +F+ D+++W+ LI+ Y Q G +A+ F K+ + + V VL+A
Sbjct: 492 VTATWRIFHRTLQRDVISWNTLISSYKQSGILAEAIILFDKMVKEKVYPNKVTCIIVLSA 551
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A A++ G IH Y+ ++GFE ++ + +AL+DMY+KCG L ++F + ER++I +
Sbjct: 552 CAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEERDVILW 611
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N +I G+HG A E F+ + E + P+ TF +LL AC H G V +GR +F RM +
Sbjct: 612 NVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACNHTGHVLEGRHLFDRM-Q 670
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+YGI+ +HY ++ LLG +G+LE A + + S+P D V G+LLS C I+ ++
Sbjct: 671 KYGIEPSLKHYASIIDLLGRSGSLEAAEALVLSMPITPDGTVWGSLLSACKIHNEFEVGV 730
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+A E+DP+ Y ++LS+ Y+ GRWD+V K+RD + G+ K AG S
Sbjct: 731 RLARYAIESDPKNDGYYIILSDLYSCLGRWDEVEKVRDMMKKRGVEKRAGWS 782
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 201/421 (47%), Gaps = 6/421 (1%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
SK + + + H+L+ + F+ATKL+ YA + + LF + +FL
Sbjct: 46 FSKPNLTFQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHLFRLIHSKDIFL 105
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WNSII+++ + A + + + P+ FT + C+E +HG +
Sbjct: 106 WNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMFNHGMNIHG--L 163
Query: 132 VSGLGR---DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
S LG +S S+ + YSK ++ A +F ++ D+V ++I G+ +
Sbjct: 164 TSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVGYVQNNESGR 223
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+ M R+G TP+ T+ + L G+ +HG LK+ F ++ V S ++S
Sbjct: 224 GLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCFEVVKSTILS 283
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY+RC AY F L DL++W+++I +S+ G + L+ F ++ D ++
Sbjct: 284 MYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQASEIIPDEIV 343
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I+ +L S ++ G H +++ LS + +AL+ MY K G+LG ++F +
Sbjct: 344 ISCMLMGFGNSDRIFEGKAFHARILKQCCALSGITHNALLSMYCKFGHLGTANKIFHSF- 402
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++ ++++ILG G + F R+++ G PD ++ +++ +C G +N GR
Sbjct: 403 HKSSEDWSTMILGYSNMGQKEKCISFLREMLLLGREPDLNSLVSVISSCSQVGAINIGRS 462
Query: 429 I 429
I
Sbjct: 463 I 463
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 149/336 (44%), Gaps = 4/336 (1%)
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
P+N ++ ++ N L H I +G + ++ L+ Y+ + +
Sbjct: 38 PNNCLHSFFSKP---NLTFQSLLQFHSLIITTGNSNNVFFATKLMAFYAYHRKPAFSTHL 94
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
F + D+ L NS+I G + ++ + M P+++T+ ++S E +
Sbjct: 95 FRLIHSKDIFLWNSIIQSHFSNGDYQRAFDFYLQMRASSSLPNQFTVPMVVSTCAELMMF 154
Query: 222 SVGQGIHGFCLKSS-FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ G IHG K F + S + MY++C + SA +F+ + D+VTW+ALI G
Sbjct: 155 NHGMNIHGLTSKLGLFVGNSAIGSSFIYMYSKCGHVESASIMFSEITVKDVVTWTALIVG 214
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y Q + G+ L +++ G + I S A + G +HG +++GF
Sbjct: 215 YVQNNESGRGLKCLFEMHRIGGTPNYKTIGSGFQACVDLDALVEGKCLHGLALKNGFLCF 274
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+V S ++ MYS+CG + F + ++++I++ S+I G + F ++
Sbjct: 275 EVVKSTILSMYSRCGSPEEAYRCFCKLDQKDLISWTSIIAVHSKFGLMSECLHLFWEMQA 334
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+ PDE S +L + + +G+ R+ ++
Sbjct: 335 SEIIPDEIVISCMLMGFGNSDRIFEGKAFHARILKQ 370
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 52/108 (48%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL SL +++H + + + T L+ +YA L ++R LF+ T +R
Sbjct: 547 IVLSACAHLASLDEGEKIHQYIKENGFESNITIRTALIDMYAKCGELETSRKLFNSTEER 606
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V LWN +I Y + A +F+ + + +KP+ T+ + AC+
Sbjct: 607 DVILWNVMISNYGMHGHVESAMEIFQLMEESNIKPNAQTFLSLLSACN 654
>gi|224107543|ref|XP_002314516.1| predicted protein [Populus trichocarpa]
gi|222863556|gb|EEF00687.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/547 (31%), Positives = 296/547 (54%), Gaps = 12/547 (2%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
+H+SL T++ HA + ++PF ATKL+ YA+ V +R++FD +SV+LWNS
Sbjct: 39 THKSLKLTQQCHARILSLGFTQNPFLATKLISAYAIFGVPALSRLVFDSLHFKSVYLWNS 98
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I + +N+A F + + D++T A +++ C E DL + +HG ++ +G
Sbjct: 99 LINGFVKNRAYNEAFGWFYQMCCRGVLLDDYTLATMSKVCHEIGDLNAGKLIHGKSLKTG 158
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG--FWDKSLQL 192
D I +++L++ YSK E +K+FD + + ++ N ++SG+A G +DK +
Sbjct: 159 FVLDVIVANSLMSMYSKCGGFGECLKLFDEMPERNVGSWNVILSGYADSGDRNFDKEVSG 218
Query: 193 FDWMLRL-GKTPDEYTLVGLISGLWEPSL--LSVGQGIHGFCLKSSF----DSYDYVSSV 245
F +++ G PD +T+ L++ L + G+ +HGF ++ + ++
Sbjct: 219 FVKDMQIEGLKPDAFTVSSLLT-LCNGHMGKRDHGRELHGFIVRIELAVGSGTEVHLGCC 277
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKA 304
L+ MY+R N ++ VF+ + ++ W+A+I G+ Q G + L F ++ ++ G +
Sbjct: 278 LIDMYSRSNRVDVGRRVFDRMECRNVYAWTAMINGHVQNGALEEGLVLFHEMQVRDGVEP 337
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ V + SVL A + A + IHGY I+ F V + +AL+DMYSKCG L QVF
Sbjct: 338 NKVSLVSVLPACSAVAGLTGVKQIHGYAIRKQFNNDVSLCNALIDMYSKCGSLDHAKQVF 397
Query: 365 ETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
E S R+ I+++S+I G GLHG +A + +++ G PD T +L AC GLV
Sbjct: 398 EFGSFRRDPISWSSMISGYGLHGKGEEAVFVYNKMLQLGNKPDMITIVGVLSACSRAGLV 457
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
++G I+ +Y I+ E +V +LG +G L +A +I ++P P+V GA++S
Sbjct: 458 DEGLCIYKSAINKYRIKPTVEICACVVDMLGRSGQLGQALDYIKTMPMEPSPSVWGAVVS 517
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
I+GNS++ ++ L + +P + V LSN +A RWD V ++R + D L K
Sbjct: 518 ASIIHGNSEMQDLAYRFLVQLEPENPSNYVSLSNLHASSRRWDVVSEVRTMMKDRCLTKT 577
Query: 544 AGVSWVS 550
G SW+S
Sbjct: 578 PGCSWIS 584
>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
Length = 1215
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/543 (30%), Positives = 276/543 (50%), Gaps = 3/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
++ + S S +H+L ++SL LV +Y+ L A LF +R
Sbjct: 554 LMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRD 613
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I +Y DA L T P++ T++ ACS L + VH
Sbjct: 614 LISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA 673
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ L R+ + ++L+T Y K + +++A KVF + D+V N +I G+A K
Sbjct: 674 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDGTK 733
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPS--LLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++Q+F WM G P+ T++ I G + S L + G+ +H + +++ F S +YV++ L
Sbjct: 734 AMQVFSWMRSAGIKPNYITMIN-IHGSFASSNDLHNYGRPLHAYIIRTGFLSDEYVANSL 792
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MYA+C + S+ ++FNS+ + ++V+W+A+I Q G +AL F + G K D
Sbjct: 793 ITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKLFIDMQHAGNKLDR 852
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V +A L++ A A++ G +HG ++ G + V +A +DMY KCG + +QV
Sbjct: 853 VCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMDEMLQVVPD 912
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ R +N++I G +G+ +A E F+ ++ G PD TF ALL AC H GLV+ G
Sbjct: 913 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYVTFVALLSACSHAGLVDKG 972
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+ + M +G+ +H + +V LLG G EA FI +P + + +LLS
Sbjct: 973 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEEMPVLPNDLIWRSLLSSSR 1032
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+ N ++ A +L E DP + V+LSN YA + RW DV KLR + + K
Sbjct: 1033 THKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADVDKLRSHMKTININKRPAC 1092
Query: 547 SWV 549
SW+
Sbjct: 1093 SWL 1095
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 197/383 (51%), Gaps = 2/383 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HAL +A L+ + + T L+ LY ++ A+ LF + P+R+V W +++ A +
Sbjct: 368 IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGY 427
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRAC-SENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A ++ + R + + +A + C S +++PGL+ V IVSGL ++
Sbjct: 428 LEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQ-VASQVIVSGLQNQVSVAN 486
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+T + L + +A K+FD + + D + N+MIS ++H G K +F M G P
Sbjct: 487 SLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRP 546
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D TL L+S S G GIH CL+SS DS V + LV+MY+ ++ A +F
Sbjct: 547 DATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 606
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
++ DL++W+ +I+ Y Q + AL +L + + + +S L A + +
Sbjct: 607 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALI 666
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H V+Q + +++V ++L+ MY KC + +VF++M +I++YN +I G
Sbjct: 667 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYA 726
Query: 384 LHGFTYQAFEFFRDIIEKGLNPD 406
+ +A + F + G+ P+
Sbjct: 727 VLEDGTKAMQVFSWMRSAGIKPN 749
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 183/395 (46%), Gaps = 11/395 (2%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
A L+ ++ + A LFD+ + WN++I Y+ + +F ++ L
Sbjct: 485 ANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGL 544
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS-----ALVTAYSKLSLI 155
+PD T + C+ + F HG I S R S+ SS ALV YS +
Sbjct: 545 RPDATTLCSLMSVCASSD-----HFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 599
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A +F +S DL+ N+MIS + +L+ + ++P+ T +
Sbjct: 600 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGAC 659
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
P L G+ +H L+ S V + L++MY +CN M A VF S+ D+V+++
Sbjct: 660 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYN 719
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQ 334
LI GY+ D KA+ F + G K + + + ++ + A S ++ G +H Y+I+
Sbjct: 720 VLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLHAYIIR 779
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF V+++L+ MY+KCG L +F +++ +NI+++N++I G +A +
Sbjct: 780 TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGEEALKL 839
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
F D+ G D + L +C + +G ++
Sbjct: 840 FIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL 874
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/452 (20%), Positives = 194/452 (42%), Gaps = 7/452 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARI---LFDKTPQRSVFLWNSIIRAYAL 81
+H L + +L F+ L+ Y +A LFD+ R+ W + +
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVR 320
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR---FVHGGAIVSGLGRD 138
A + + + + F A + AC G+ +H +GL +
Sbjct: 321 CGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGN 380
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+AL+ Y ++ +A ++F + + ++V +++ + G+ +++L+ + M R
Sbjct: 381 VYIGTALLHLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRR 440
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G + ++S G + + S + V++ L++M+ ++
Sbjct: 441 DGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHD 500
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+ + D ++W+A+I+ YS QG K F + G + D + S+++ A
Sbjct: 501 AEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCAS 560
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S + G+ IH ++ + SV V +ALV+MYS G L +F MS R++I++N++
Sbjct: 561 SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRDLISWNTM 620
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I + + A + + +P+ TFS+ L AC G + DG+ + + +
Sbjct: 621 ISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMVHA-IVLQLS 679
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+Q ++ + G ++E+A S+P
Sbjct: 680 LQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP 711
>gi|326495056|dbj|BAJ85624.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 673
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 275/542 (50%), Gaps = 1/542 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L L+ S + LH KA D F LV +YA L +AR +FD+ R
Sbjct: 128 LALKASVRSADFRYGRRLHCNAVKAGG-ADGFVMNCLVDMYAKAGDLENARKVFDRILGR 186
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W S++ + +LF + ++ P +T A + AC+ L R+VH
Sbjct: 187 NVVSWTSMLSGCLQNGFAEEGLALFNEMREERVLPSEYTMASVLMACTMLGSLHQGRWVH 246
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G I G+ + ++A++ Y K +++A ++FD + DLVL +MI G+ G
Sbjct: 247 GSVIKHGMVFNPFITAAVLDMYVKCGEVEDARRLFDELGFVDLVLWTTMIVGYTQNGSPL 306
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+L LF + P+ T+ ++S + LS+G+ IH +K D V + LV
Sbjct: 307 DALLLFSDKKFVHIVPNSVTIATVLSASAQLRNLSLGRLIHAMSVKLLVIENDVVMNALV 366
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MYA+C ++ A +F + + D+VTW++LI GY + +AL F ++ +QG D +
Sbjct: 367 DMYAKCKALSEANGIFGRISNKDVVTWNSLIAGYVENDMGNEALMLFSQMRVQGSSPDAI 426
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
I + L+A ++ G H Y ++ F +V V++AL+++Y+KC L +VF M
Sbjct: 427 SIVNALSACVCLGDLLIGKCFHTYAVKRAFLSNVYVNTALLNLYNKCADLPSAQRVFSEM 486
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
SERN +T+ ++I G G+ G + + + +++ + P+E F+++L C H G+V+ G+
Sbjct: 487 SERNSVTWGAMIGGYGMQGDSAGSIDLLNKMLKDNIQPNEVVFTSILSTCSHTGMVSVGK 546
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M + + I +HY MV +L AGNLEEA FI +P P D ++ GA L C +
Sbjct: 547 MCFDSMAQYFNITPSMKHYACMVDVLARAGNLEEALEFIQKMPMPADISIWGAFLHGCKL 606
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ + E +++ P K + V++SN Y GRWD + +R + + GL K G S
Sbjct: 607 HSRLEFGEEAINRMMVLHPDKPDFYVLMSNLYTSYGRWDKSLAIRRLMQERGLVKLPGCS 666
Query: 548 WV 549
V
Sbjct: 667 SV 668
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/409 (29%), Positives = 201/409 (49%), Gaps = 4/409 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + LHA + LLR TKL+ YA L SAR + D+TP+ + + +
Sbjct: 35 TLPSLRALHARLLAHGLLRALRARTKLLSCYAALGDLASARRVLDETPRPDPYTYRVALG 94
Query: 78 AYALAHRFNDAKSLFKNLLR--TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+A A R DA +L + + R + D + +A ++D R +H A+ +G
Sbjct: 95 WHAAAGRHADALALHRGMRRRCPEAHDDVVLLSLALKASVRSADFRYGRRLHCNAVKAG- 153
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
G D + LV Y+K ++ A KVFD + ++V SM+SG GF ++ L LF+
Sbjct: 154 GADGFVMNCLVDMYAKAGDLENARKVFDRILGRNVVSWTSMLSGCLQNGFAEEGLALFNE 213
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M P EYT+ ++ L G+ +HG +K ++++ ++ MY +C
Sbjct: 214 MREERVLPSEYTMASVLMACTMLGSLHQGRWVHGSVIKHGMVFNPFITAAVLDMYVKCGE 273
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A +F+ L DLV W+ +I GY+Q G AL F + V IA+VL+A
Sbjct: 274 VEDARRLFDELGFVDLVLWTTMIVGYTQNGSPLDALLLFSDKKFVHIVPNSVTIATVLSA 333
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+A+ N+ G +IH ++ + +V +ALVDMY+KC L +F +S ++++T+
Sbjct: 334 SAQLRNLSLGRLIHAMSVKLLVIENDVVMNALVDMYAKCKALSEANGIFGRISNKDVVTW 393
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLV 423
NS+I G + +A F + +G +PD + L AC C G L+
Sbjct: 394 NSLIAGYVENDMGNEALMLFSQMRVQGSSPDAISIVNALSACVCLGDLL 442
>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 944
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 272/529 (51%), Gaps = 3/529 (0%)
Query: 24 ELHALVAKASLLRDPFYAT--KLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++HA K + F L++ Y L A +LF++ + +N++I Y
Sbjct: 162 QVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSVTFNTLITGYEK 221
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ +A LF + ++ KP +FT++ + +A D + +HG ++ +G RD+
Sbjct: 222 DGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASV 281
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ ++ YSK + E +F+ + + D V N +IS ++ +++SL LF M +G
Sbjct: 282 GNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESLNLFREMQCMGF 341
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ ++S S L VG+ +H + ++ DS +V + LV MYA+C + A
Sbjct: 342 DRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAEL 401
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F SL V+W+ALI+GY Q+G +G L F K+ +AD A+VL A+A A+
Sbjct: 402 IFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFAS 461
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +H ++I+ G +V S LVDMY+KCG + +QVFE M +RN +++N++I
Sbjct: 462 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 521
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G A F +I+ GL PD + +L AC H G V G E F M+ YGI
Sbjct: 522 YADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITP 581
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
K +HY M+ LLG G EA + +P D + ++L+ C IY N LAE A QL
Sbjct: 582 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQL 641
Query: 502 FENDP-RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
F + R A V +SN YA G+W++V ++ + + G++K SWV
Sbjct: 642 FSMEKLRDAAAYVSMSNIYAAAGKWENVRHVKKAMRERGIKKVPAYSWV 690
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/529 (23%), Positives = 243/529 (45%), Gaps = 57/529 (10%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L SAR LFD P R+V W ++ YA + F++A LF+ + R+ PD T+ +
Sbjct: 91 LSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFTTLLPG 150
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITS--SALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
C++ + VH A+ G + + + L+ +Y ++ +D A +F+ + D D V
Sbjct: 151 CNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEILDKDSV 210
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N++I+G+ G + +++ LF M + G P ++T G++ + ++GQ +HG
Sbjct: 211 TFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLS 270
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
+ + F V + ++ Y++ + + ++FN + D V+++ +I+ YSQ Y ++L
Sbjct: 271 VTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQYEESL 330
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
FR++ G A++L+ AA +++ G +H I + + V ++LVDMY
Sbjct: 331 NLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATADSILHVGNSLVDMY 390
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGL---GLHGFTYQAFEFFRDIIEKGLNPDES 408
+KC +F+++S+R+ +++ ++I G GLHG + F + L D+S
Sbjct: 391 AKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHG---AGLKLFTKMRGANLRADQS 447
Query: 409 TFSALLCACC-----------HG------------------------GLVNDGREIFTRM 433
TF+ +L A H G + D ++F M
Sbjct: 448 TFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEM 507
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAY----SFIWSLPKPVDPAVSGALLSCCH--- 486
+ + + ++ G+ E A I S +P ++ G L++C H
Sbjct: 508 PDRNAVS-----WNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGF 562
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ ++ + ++ ++ P+K Y ML + +GR+ + KL D++
Sbjct: 563 VEQGTEFFQAMS-PIYGITPKKKHYACML-DLLGRNGRFAEAEKLMDEM 609
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 175/402 (43%), Gaps = 47/402 (11%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LH L RD +++ Y+ ++ + R LF++ P+ +N +I +Y+ A
Sbjct: 264 QQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQA 323
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI-- 140
++ ++ +LF+ + NF +A + + S L R VH AIV+ DSI
Sbjct: 324 EQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQVHCQAIVATA--DSILH 381
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++LV Y+K + DEA +F +S V ++ISG+ G L+LF M
Sbjct: 382 VGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGAN 441
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D+ T ++ + L +G+ +H F ++S + S LV MYA+C + A
Sbjct: 442 LRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 501
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + V+W+ALI+ Y+ GD A+ F K+ G + D V I VL A
Sbjct: 502 QVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQPDSVSILGVLIAC---- 557
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT-----Y 375
S CG++ G + F+ MS IT Y
Sbjct: 558 -------------------------------SHCGFVEQGTEFFQAMSPIYGITPKKKHY 586
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++ LG +G +A + E PDE +S++L AC
Sbjct: 587 ACMLDLLGRNGRFAEAEKLMD---EMPFEPDEIMWSSVLNAC 625
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 135/295 (45%), Gaps = 2/295 (0%)
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+++++++ +++ Y K+ + A +FD + D +V ++ +A +D++ +LF M
Sbjct: 73 KNTVSTNTMISGYVKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQM 132
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS--YDYVSSVLVSMYARCN 254
R PD T L+ G + + +H F +K FD+ + V +VL+ Y
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVR 192
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ A +F + D VT++ LITGY + G Y +A++ F K+ G K + VL
Sbjct: 193 RLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLK 252
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + G +HG + GF V + ++ YSK + +F M E + ++
Sbjct: 253 AVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVS 312
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
YN VI ++ FR++ G + F+ +L + + GR++
Sbjct: 313 YNVVISSYSQAEQYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVGRQV 367
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 143/328 (43%), Gaps = 23/328 (7%)
Query: 9 VLELSKSHQSLSRTKELH--ALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+L ++ + SL +++H A+VA A S+L LV +YA + A ++F
Sbjct: 351 MLSIAANLSSLQVGRQVHCQAIVATADSILH---VGNSLVDMYAKCEMFDEAELIFKSLS 407
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
QRS W ++I Y LF + L+ D T+A + +A + + L +
Sbjct: 408 QRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQ 467
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I SG + + S LV Y+K I +A++VF+ + D + V N++IS +A G
Sbjct: 468 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGD 527
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG-------QGIHGFCLKSSFDS 238
+ ++ F M++ G PD +++G++ + G I+G K
Sbjct: 528 GEAAIGAFTKMIQSGLQPDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKH-- 585
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITG---YSQQGDYGKALYYF 294
+ ++ + R A + + + F PD + WS+++ Y Q +A
Sbjct: 586 ----YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQL 641
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANV 322
+ A V ++++ AAA K NV
Sbjct: 642 FSMEKLRDAAAYVSMSNIYAAAGKWENV 669
>gi|449475590|ref|XP_004154496.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 974
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 172/534 (32%), Positives = 276/534 (51%), Gaps = 12/534 (2%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH ++ K + F A LV +YA + L AR F+ WN+II Y
Sbjct: 431 QLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEE 490
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
++A +F+ ++ + PD + A I AC+ +L + H + GL + S
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+ Y K ++ A VF + ++V N++I+G+ G ++++ LF + +G P
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQEIQMVGLKP 609
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV- 262
E T GL+ G +L++G+ IHG +K F S SS +V + C MNS V
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLS----SSEMVCVSLLCLYMNSQRFVD 665
Query: 263 ----FNSLFHPD-LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
F+ L +P LV W+ALI+GY+QQ + KAL +++ + D ASVL A A
Sbjct: 666 SETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACA 725
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN-IITYN 376
+++ G IH + GF + + S+L+DMY+KCG + +QVF M RN +I++N
Sbjct: 726 GMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWN 785
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I+GL +G+ +A E F+ + ++ + PDE TF +L AC H G V++GR++F M
Sbjct: 786 SMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNN 845
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y +Q + +H MV +LG G L EA FI L DP + LL C +G+ +
Sbjct: 846 YKLQPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKR 905
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A +L E P+ + V+LS+ YAE W + LR ++ G++K G SW+
Sbjct: 906 AADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWIE 959
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 204/408 (50%), Gaps = 2/408 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D +V Y L AR LF + P +V WN +I +A +A S F L
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+T LK + + A + S L VH A GL + SALV Y+K S +D
Sbjct: 302 KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMD 361
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +VF+ + + ++VL N+M+ GFA G + ++ F M R G PDE+T + S
Sbjct: 362 AAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACA 421
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
L+ G +H +K+ F S +V++ LV MYA+ + A F + D V+W+A
Sbjct: 422 SLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNA 481
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I GY Q+ +A + FR++ G D V +AS+++A A + G H +++ G
Sbjct: 482 IIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVG 541
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ S S+L+DMY KCG + VF +M RN+++ N++I G + G +A F+
Sbjct: 542 LDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQ 600
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+I GL P E TF+ LL C ++N GR+I ++ ++G + +E
Sbjct: 601 EIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM-KWGFLSSSE 647
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 35/419 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+LS K +H+ K + +V LY + A+ F + ++ VF WNS++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y F F + +++P+ FT+A + ACS D+ R VH G +G G
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S L+ Y+K + +A VFDG + D V ++I+G+ GF +++++FD M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R+G PD+ TLV +V+ Y +
Sbjct: 235 QRVGHAPDQITLV-----------------------------------TVVNAYVALGRL 259
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F + +P++V W+ +I+G++++G +A+ +F +L G KA + SVL+A
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + + G+++H + G + +V V SALV+MY+KC + QVF ++ ERNI+ +N
Sbjct: 320 ASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWN 379
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+++ G +G + EFF + G PDE TF+++ AC +N G ++ T M +
Sbjct: 380 AMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK 438
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 198/421 (47%), Gaps = 35/421 (8%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL Q ++ +++H V K F L+ +YA L AR++FD
Sbjct: 147 MVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNL 206
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
W ++I Y +A +F + R PD
Sbjct: 207 DTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQ----------------------- 243
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
IT +V AY L + +A K+F + +P++V N MISG A GF +
Sbjct: 244 ------------ITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ F + + G +L ++S + S+L+ G +H K D YV S LV
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV 351
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+C+ M++A VFNSL ++V W+A++ G++Q G + + +F + G + D
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
S+ +A A + G +H +I++ F ++ V++ALVDMY+K G L + FE M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ +++N++I+G + +AF FR ++ G+ PDE + ++++ AC + + G+
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531
Query: 428 E 428
+
Sbjct: 532 Q 532
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 198/409 (48%), Gaps = 3/409 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K L + + + LV +YA + + +A+ +F+ +R++ LWN+++ +A
Sbjct: 331 VHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL 390
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ F + R +PD FT+ I AC+ L +H I + + ++A
Sbjct: 391 AQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANA 450
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K + EA K F+ + D V N++I G+ + D++ +F M+ G PD
Sbjct: 451 LVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
E +L ++S L GQ H +K D+ S L+ MY +C + +A VF
Sbjct: 511 EVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S+ ++V+ +ALI GY+ G +A++ F+++ M G K V A +L + +
Sbjct: 571 SMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629
Query: 325 GAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGL 382
G IHG V++ GF S MV +L+ +Y +F E + ++ + ++I G
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGY 689
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+A +F++ + + PD++ F+++L AC + +G+EI +
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHS 738
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
LS + IH LK + +V+V +Y +C ++ A F+ L D+ W+++++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y G + + F + + + A VL+A + +V G +H V + GF
Sbjct: 117 YLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
L+DMY+KC YL VF+ + +++ ++I G GF +A + F +
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G PD+ T ++ A G + D R++FT++ + + M+ G E
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVA-----WNVMISGHAKRGFAE 291
Query: 461 EAYSFIWSLPK 471
EA SF L K
Sbjct: 292 EAISFFLELKK 302
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR- 67
VL SL +E+H+L+ D + L+ +YA + + +F + P+R
Sbjct: 720 VLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRN 779
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+V WNS+I A +A +FK + + + PD T+ + ACS
Sbjct: 780 NVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACS 827
>gi|242032375|ref|XP_002463582.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
gi|241917436|gb|EER90580.1| hypothetical protein SORBIDRAFT_01g002460 [Sorghum bicolor]
Length = 610
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 163/524 (31%), Positives = 278/524 (53%), Gaps = 14/524 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + L+ + +HA + L + AT L +Y AR +FD+ P R
Sbjct: 65 LLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARRVFDRMPARD 124
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-----LKPDNFTYACITRACSENSDLPGL 123
WN+++ YA R + ++R Q +PD+ T + AC++ L
Sbjct: 125 RVAWNALVAGYA---RNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADARVLGAC 181
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R VH A+ +GL S+A++ AY K ++ A VFD + + V N+MI G+A
Sbjct: 182 REVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMIDGYAEN 241
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++L LF M++ G + ++ + E L + +H ++ S V
Sbjct: 242 GNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLKSNVSVM 301
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++ Y++C + A H FN L ++W+A+I G++Q G A F ++ ++
Sbjct: 302 NALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFARMQLENV 361
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D + SV+ A A ++ IHGY I+H + + V +AL+DMYSKCG + + +
Sbjct: 362 KPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDIYVLTALIDMYSKCGRVTIARK 421
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F++ +R++IT+N++I G G HGF A E F ++ G P+E+TF ++L AC H GL
Sbjct: 422 LFDSARDRHVITWNAMIHGYGSHGFGQVAVELFEEMKGTGSLPNETTFLSVLAACSHAGL 481
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GA 480
V++GR+ F M ++YG++ EHY +V LLG AG ++EA+SFI ++ P++P +S GA
Sbjct: 482 VDEGRKYFASM-KDYGLEPGMEHYGTLVDLLGRAGKVDEAWSFIQNM--PIEPGISVYGA 538
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGR 524
+L C ++ N +LAE A ++FE P +G+ ++ + E R
Sbjct: 539 MLGACKLHKNVELAEESAQKIFELGPEEGSLSQTMNASMEELAR 582
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 171/356 (48%), Gaps = 8/356 (2%)
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+P T+ + + C+ +DL R VH GL +S+ ++AL Y K +A +
Sbjct: 56 RPVLRTFTALLKLCAARADLATGRAVHAQLTARGLASESLAATALANMYFKCRRPVDARR 115
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML--RLGKTPDEYTLVGLISGLWEP 218
VFD + D V N++++G+A G +++ M G+ PD TLV ++ +
Sbjct: 116 VFDRMPARDRVAWNALVAGYARNGLPALAMEAVVRMQGEEGGEQPDSITLVSVLPACADA 175
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+L + +H F L++ D VS+ ++ Y +C + +A VF+ + + V+W+A+I
Sbjct: 176 RVLGACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVEAARAVFDWMPVRNSVSWNAMI 235
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GY++ G+ +AL F ++ +G + + L A + + +H +++ G +
Sbjct: 236 DGYAENGNASEALALFWRMVQEGVDVTDAAVLAALQACRELGCLDEARRVHELLVRVGLK 295
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+V V +AL+ YSKC L F + ++ I++N++ILG +G + A F
Sbjct: 296 SNVSVMNALITTYSKCKRADLAAHAFNELGIKKTRISWNAMILGFTQNGCSEDAERLFAR 355
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
+ + + PD T +++ A + + + R Y I+ + + IY++ L
Sbjct: 356 MQLENVKPDSFTLVSVIPA-----VADISDPLQARWIHGYSIRHQLDQDIYVLTAL 406
>gi|449521645|ref|XP_004167840.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like, partial [Cucumis sativus]
Length = 735
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 296/579 (51%), Gaps = 40/579 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQR 67
+E ++ +S+ + K++ + + + L D KL+ A +++ L A +F+
Sbjct: 101 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 160
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
S+F++N +++ YA LF+ L L PD FTY + +A D+ V
Sbjct: 161 SLFVYNVMVKIYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVR 220
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + +G+ D+ ++L+ Y +LS ++ A K+FD ++ D V N MISG+ C ++
Sbjct: 221 GFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFE 280
Query: 188 KSLQLFDWMLRLG-KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ F M + G + PDE T+V +S L +G IH + ++ + + L
Sbjct: 281 DAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNAL 339
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD-------------------- 286
+ MYA+C C+N A ++F+ + +++ W+++I+GY GD
Sbjct: 340 LDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 399
Query: 287 -----------YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+ A+ FR++ +Q K D + ++L A+ + G IHGY+ ++
Sbjct: 400 AMINGYVQFHHFDDAVALFREMQIQKIKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN 459
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
+ V+V +AL++MYSKCG + +++F + +++ ++ S+I GL ++G T +A F
Sbjct: 460 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLF 519
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
++ G PD+ TF +L AC HGGLV +GR F M + + I+ K EHY ++ LLG
Sbjct: 520 SEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGR 579
Query: 456 AGNLEEAYSFIWSLP----KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
AG L+EA I +P + V P + GALLS C I+ N D+ E +A +L + +
Sbjct: 580 AGLLDEAEELIQEIPIENCEIVVP-LYGALLSACRIHNNVDMGERLAKKLENIESCDSSI 638
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L+N YA RW+D K+R + + G++K G S +
Sbjct: 639 HTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIE 677
>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
Length = 670
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 276/531 (51%), Gaps = 35/531 (6%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
LP A +F+ + ++ +WN++ R +AL+ A L+ ++ L P+++T+ + ++
Sbjct: 13 LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72
Query: 114 CSE-NSDLPGLRFVHGGAIVSGLG-------------------------------RDSIT 141
C++ + GL+ +HG + G RD ++
Sbjct: 73 CAKLKASKEGLQ-IHGHVLKLGYELDLYVHTSLISMYVQNERLEDAHKVFDRSSHRDVVS 131
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ALVT Y+ I+ A +FD + D+V N+MISG+ G + ++L+LF M++
Sbjct: 132 YTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKTNV 191
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PDE T+V +IS + +G+ +H + F S + + L+ Y++C M +A
Sbjct: 192 RPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACG 251
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F L + D+++W+ LI GY+ Y +AL F+++ G+ + V + S+L A A
Sbjct: 252 LFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGA 311
Query: 322 VWPGAVIHGYVIQH--GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G IH Y+ + G + + ++L+DMYSKCG + QVF +M +++ +N++I
Sbjct: 312 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMI 371
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +HG AF+ F + + + PD+ TF LL AC H G+++ GR IF MT Y I
Sbjct: 372 FGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKI 431
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
K EHY M+ LLG +G +EA I ++ D + +LL C ++GN +L E A
Sbjct: 432 TPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQ 491
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
LF+ +P V+LSN YA GRW++V ++R + D G++K G S +
Sbjct: 492 NLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIE 542
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 151/352 (42%), Gaps = 19/352 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ S S+ +++H+ +A + L+ Y+ + +A LF +
Sbjct: 201 VISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMETACGLFLGLSYKD 260
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN +I Y + + +A LF+ +LR+ P++ T I AC+ + R++H
Sbjct: 261 VISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAHLGAIDIGRWIHV 320
Query: 129 --GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
+ G+ S ++L+ YSK I+ A +VF+ + L N+MI GFA G
Sbjct: 321 YIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRA 380
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDY 241
+ + +F M + PD+ T VGL+S +L +G+ I H + + + Y
Sbjct: 381 NAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHNYKITPKLEHY-- 438
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
++ + A + +++ PD V W +L+ G+ + + L +
Sbjct: 439 --GCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEKFAQNL-FK 495
Query: 301 GKKADP---VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
+ +P VL++++ A A + V A I G + G + SS +D
Sbjct: 496 IEPNNPGSYVLLSNIYATAGRWNEV---ARIRGLLNDKGMKKVPGCSSIEID 544
>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g01510
gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 825
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/529 (31%), Positives = 269/529 (50%), Gaps = 3/529 (0%)
Query: 24 ELHALVAKASLLRDPFYATK--LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++HA K +PF L++ Y L A +LF++ P++ +N++I Y
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ ++ LF + ++ +P +FT++ + +A D + +H ++ +G RD+
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ ++ YSK + E +FD + + D V N +IS ++ ++ SL F M +G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF 347
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ ++S S L +G+ +H L ++ DS +V + LV MYA+C A
Sbjct: 348 DRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAEL 407
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F SL V+W+ALI+GY Q+G +G L F K+ +AD A+VL A+A A+
Sbjct: 408 IFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFAS 467
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +H ++I+ G +V S LVDMY+KCG + +QVFE M +RN +++N++I
Sbjct: 468 LLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISA 527
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G A F +IE GL PD + +L AC H G V G E F M+ YGI
Sbjct: 528 HADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITP 587
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
K +HY M+ LLG G EA + +P D + ++L+ C I+ N LAE A +L
Sbjct: 588 KKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKL 647
Query: 502 FENDP-RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
F + R A V +SN YA G W+ V ++ + + G++K SWV
Sbjct: 648 FSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWV 696
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 186/370 (50%), Gaps = 10/370 (2%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ--LKPDNFTYACIT 111
+ SAR LFD P R+V W ++ YA F++A LF+ + R+ PD+ T+ +
Sbjct: 95 VSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLL 154
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSI--TSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
C++ + VH A+ G + S+ L+ +Y ++ +D A +F+ + + D
Sbjct: 155 PGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKD 214
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
V N++I+G+ G + +S+ LF M + G P ++T G++ + ++GQ +H
Sbjct: 215 SVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA 274
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+ + F V + ++ Y++ + + +F+ + D V+++ +I+ YSQ Y
Sbjct: 275 LSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEA 334
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
+L++FR++ G A++L+ AA +++ G +H + + + V ++LVD
Sbjct: 335 SLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVD 394
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGL---GLHGFTYQAFEFFRDIIEKGLNPD 406
MY+KC +F+++ +R +++ ++I G GLHG + F R L D
Sbjct: 395 MYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRG---SNLRAD 451
Query: 407 ESTFSALLCA 416
+STF+ +L A
Sbjct: 452 QSTFATVLKA 461
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 190/449 (42%), Gaps = 54/449 (12%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHAL RD +++ Y+ ++ + R+LFD+ P+ +N +I +Y+ A
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI-- 140
++ + F+ + NF +A + + S L R +H A+++ DSI
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATA--DSILH 387
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++LV Y+K + +EA +F + V ++ISG+ G L+LF M
Sbjct: 388 VGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSN 447
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D+ T ++ + L +G+ +H F ++S + S LV MYA+C + A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + V+W+ALI+ ++ GD A+ F K+ G + D V I VL A
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTAC---- 563
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT-----Y 375
S CG++ G + F+ MS IT Y
Sbjct: 564 -------------------------------SHCGFVEQGTEYFQAMSPIYGITPKKKHY 592
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ LG +G +A + + E PDE +S++L AC ++ + + R E
Sbjct: 593 ACMLDLLGRNGRFAEAEKL---MDEMPFEPDEIMWSSVLNAC----RIHKNQSLAERAAE 645
Query: 436 EYGIQAKTEH---YIYMVKLLGLAGNLEE 461
+ K Y+ M + AG E+
Sbjct: 646 KLFSMEKLRDAAAYVSMSNIYAAAGEWEK 674
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 136/297 (45%), Gaps = 4/297 (1%)
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+++++++ +++ + K + A +FD + D +V ++ +A +D++ +LF M
Sbjct: 77 KNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 197 LRLGKT--PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY--VSSVLVSMYAR 252
R PD T L+ G + + +H F +K FD+ + VS+VL+ Y
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCE 196
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
++ A +F + D VT++ LITGY + G Y ++++ F K+ G + + V
Sbjct: 197 VRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGV 256
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A + G +H + GF V + ++D YSK + +F+ M E +
Sbjct: 257 LKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDF 316
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++YN VI + FFR++ G + F+ +L + + GR++
Sbjct: 317 VSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQL 373
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 20/283 (7%)
Query: 9 VLELSKSHQSLSRTKELH--ALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+L ++ + SL ++LH AL+A A S+L LV +YA + A ++F P
Sbjct: 357 MLSIAANLSSLQMGRQLHCQALLATADSILH---VGNSLVDMYAKCEMFEEAELIFKSLP 413
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
QR+ W ++I Y LF + + L+ D T+A + +A + + L +
Sbjct: 414 QRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQ 473
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I SG + + S LV Y+K I +A++VF+ + D + V N++IS A G
Sbjct: 474 LHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGD 533
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG-------QGIHGFCLKSSFDS 238
+ ++ F M+ G PD +++G+++ + G I+G K
Sbjct: 534 GEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH-- 591
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITG 280
+ ++ + R A + + + F PD + WS+++
Sbjct: 592 ----YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>gi|297738941|emb|CBI28186.3| unnamed protein product [Vitis vinifera]
Length = 760
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 160/492 (32%), Positives = 268/492 (54%), Gaps = 17/492 (3%)
Query: 69 VFLWNSIIRAYALAHRFNDAKS---------LFKNLLRTQLKPDNFTYACITRACSENSD 119
VF+ N++I Y+ R +A+ +F +L+ +K D+ ++ AC +
Sbjct: 211 VFVGNALITMYSRCCRLVEARRGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKE 270
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
R +H A+ G + L++ YSK I++A VF+ + D ++V +MIS
Sbjct: 271 FELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISI 330
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ + LF+ M R G P++ T VGLI + +L+ GQ IHG C+K+SF S
Sbjct: 331 SE-----EDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSE 385
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
VS+ L++MYA+ M+ + VF L + ++++W++LI+GY+Q G + +AL F M
Sbjct: 386 LNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGLWQEALQTFLSALM 445
Query: 300 QGKKADPVLIASVLA--AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ + + SVL+ A+A++ ++ G H ++++ G + +VSSAL+DMY+K G +
Sbjct: 446 ESR-PNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSI 504
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ VF +N + + ++I HG F+D+ +G+ PD TF A++ AC
Sbjct: 505 CESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITAC 564
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
G+V+ G ++F M +++ I+ EHY MV +LG AG L+EA F+ +P +V
Sbjct: 565 GRKGMVDTGYQLFNSMVKDHLIEPSPEHYSSMVDMLGRAGRLKEAEEFVGQIPGGAGLSV 624
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
+LL C I+GN D+A+ VA L E +P V++SN YAE G W+ V K+R + +
Sbjct: 625 LQSLLGACRIHGNVDMAKRVADDLIEMEPMGSGSYVLMSNLYAEKGEWEKVAKIRKGMRE 684
Query: 538 NGLRKEAGVSWV 549
G+RKE G SWV
Sbjct: 685 RGVRKEIGFSWV 696
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 106/413 (25%), Positives = 183/413 (44%), Gaps = 54/413 (13%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH +V + S+ F+++K V P D++PQ ++ S+ R+ A
Sbjct: 9 KILHRVVQQRSIQFKYFHSSKHVHQ-------P-----LDQSPQTTI---ASLNRSMLTA 53
Query: 83 HRFN---DAKSLFKNLLRTQL--KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
R N +A LFK L+ D T A + +AC +S L G + +H AI SG
Sbjct: 54 LRRNLSLEALDLFKKQLQWGFVGNIDQVTVAIVLKACCGDSKL-GCQ-IHAFAISSGFIS 111
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++L+ Y K L D A+ VF+ +++PD+V N+++SGF D +L M
Sbjct: 112 HVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSWNTVLSGFQRS---DDALNFALRMN 168
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G D T +++ + G +H LK D +V + L++MY+RC +
Sbjct: 169 FTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLV 228
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIASVLAAA 316
A ++G+ G +A+ F ++ +G K D V ++A
Sbjct: 229 EA-----------------------RRGNSGLEAILVFLEMLKEGMKLDHVSFTGAISAC 265
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
G IH ++ G++ V V + L+ YSKC + VFE++ +RN++++
Sbjct: 266 GHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWT 325
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++I A F ++ G+ P++ TF L+ A LV +G+ I
Sbjct: 326 TMI-----SISEEDATSLFNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMI 373
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 94/202 (46%), Gaps = 3/202 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + K S L + + L+ +YA + + +F++ R + WNS+I YA
Sbjct: 373 IHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNGL 432
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACI--TRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A F + L + +P+ FT+ + + A +E + + H + GL + I S
Sbjct: 433 WQEALQTFLSAL-MESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVS 491
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL+ Y+K I E++ VF + V ++IS A G ++ + LF M R G
Sbjct: 492 SALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDMEREGVK 551
Query: 203 PDEYTLVGLISGLWEPSLLSVG 224
PD T + +I+ ++ G
Sbjct: 552 PDSITFLAVITACGRKGMVDTG 573
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 51/97 (52%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ + H+ + K L +P ++ L+ +YA + + +F +TP ++ W +II
Sbjct: 468 SMRHGQRCHSHILKLGLNTNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIIS 527
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
A+A + +LFK++ R +KPD+ T+ + AC
Sbjct: 528 AHARHGDYEAVMNLFKDMEREGVKPDSITFLAVITAC 564
>gi|225217042|gb|ACN85326.1| EMB2261 putative [Oryza brachyantha]
Length = 626
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 174/532 (32%), Positives = 266/532 (50%), Gaps = 6/532 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+HA A+ LL D + A L+ Y L LP A FD P+R V +SI+ A+ A
Sbjct: 59 IHARAARGGLLADRYLANALLSFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 118
Query: 84 RFNDAKSLFKNLLRT--QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
A + +++L + P+ ++ +ACS D +HG +V G G D I
Sbjct: 119 MPRRALASLRSMLAEADDVSPNAHAFSAAVKACSVLRDRNAGACLHGSILVRGFGDDDIV 178
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-G 200
SALV Y S +A K F+ + PD + S+IS F +++++++ F ML + G
Sbjct: 179 LSALVDMYGHASAPSDAQKAFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMNG 238
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD T +++ L + G+ H + V S + MYA+C M A
Sbjct: 239 VRPDGCTFGSMMTALGNLKRENQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGSMVEAR 298
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+ + + V+W AL+ GY Q G+Y K + FR+ M K D + +VL A A +
Sbjct: 299 KVFDRMLVRNEVSWCALLGGYCQNGEYEKVVALFRE--MDKKDGDWYSLGTVLRACAGLS 356
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+V PG IH ++ G V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 357 SVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYTVFEASTVRNTITWNAMIG 416
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +G +A F ++ +G PD +F ++L AC H G+V GR+ F M+ Y I
Sbjct: 417 GFAQNGHGERAINLFDRMVREGPRPDYISFVSVLFACSHTGMVEQGRKYFNSMSNNYTIA 476
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY MV LL LEEA I P D ++ A+L + N D+AE VA +
Sbjct: 477 PGIEHYNCMVDLLSRVELLEEAEDLINKSPFRGDSSLWAAILGASATHSNPDVAERVAKK 536
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
+ E P+ V+L N Y GRW+D +++R + ++KE G+SW+ +
Sbjct: 537 MMELQPQYHLSYVLLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWIDAN 588
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 119/262 (45%), Gaps = 12/262 (4%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++ HA V L + + + +YA + AR +FD+ R+ W +++ Y
Sbjct: 263 RQAHAQVVTRGLCGNVIVESSTLDMYAKCGSMVEARKVFDRMLVRNEVSWCALLGGYCQN 322
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +LF+ + + D ++ + RAC+ S + + +H + G RD +
Sbjct: 323 GEYEKVVALFREM--DKKDGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGGWRDVVVE 380
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y+K +D A VF+ + + + N+MI GFA G ++++ LFD M+R G
Sbjct: 381 SALVDLYAKCGAVDYAYTVFEASTVRNTITWNAMIGGFAQNGHGERAINLFDRMVREGPR 440
Query: 203 PDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD + V ++ +G+ E + + + + Y+ +V + +R +
Sbjct: 441 PDYISFVSVLFACSHTGMVEQGRKYFNSMSNNYTIAPGIEHYN----CMVDLLSRVELLE 496
Query: 258 SAYHVFN-SLFHPDLVTWSALI 278
A + N S F D W+A++
Sbjct: 497 EAEDLINKSPFRGDSSLWAAIL 518
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + RD + LV LYA + A +F+ + R+
Sbjct: 348 VLRACAGLSSVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYTVFEASTVRN 407
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
WN++I +A A +LF ++R +PD ++ + ACS
Sbjct: 408 TITWNAMIGGFAQNGHGERAINLFDRMVREGPRPDYISFVSVLFACS 454
>gi|255539585|ref|XP_002510857.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223549972|gb|EEF51459.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 641
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/573 (30%), Positives = 284/573 (49%), Gaps = 35/573 (6%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQRSV 69
++ KS S+ KE HA + + ++P + +++ YAL+ L A F + Q ++
Sbjct: 62 QIIKSGFSIKSIKEQHAHLIRTHHHKNPKSMSNVIKSYALSRSHLNKANFAFIQIGQPTL 121
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHG 128
++N +IR + + N+A ++ +L+ Q + DN T+ + +ACS D+ + H
Sbjct: 122 LIFNYLIRGLSQSENPNEAIVMYSDLMYNQGILGDNLTFIYLFKACSRVKDVLHGQVFHV 181
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G G ++L+ Y + A KVFD + D DLV NS+I G++ C + +
Sbjct: 182 QVLKLGFGSYLFIENSLIRMYGYFGELGYAQKVFDKMDDRDLVSWNSLICGYSQCNRFKE 241
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L LF+ M T D T+V +I V + + D Y+ + L+
Sbjct: 242 VLDLFNLMREANVTADSVTMVKVILACSYLCEDGVVDSMVKYIEDKHVDIDVYLGNSLID 301
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY--------------------- 287
MY R ++ A VF+ + ++V+W+A++TGY+ GD
Sbjct: 302 MYGRRGLVDLARRVFDRMQEKNIVSWNAMLTGYATAGDLVAAKKLFNEMPIRNVISWTCM 361
Query: 288 ----------GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
AL F+++ K D + ++SVL+A + + G +H Y+ +H
Sbjct: 362 ISGCAQANQCSDALKLFQEMMDANVKPDEITVSSVLSACSHLGLLDTGQTVHEYMCRHDI 421
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ V V +AL+DMY KCG + ++VF M +++ +++ S+ILGL ++GF FE F
Sbjct: 422 KSDVYVGNALIDMYCKCGVVDKALEVFHDMKKKDSVSWTSMILGLAVNGFVDNVFELFSQ 481
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
++ GL P +F +L AC H GLV+ G E F M YG++ + +HY +V LL +G
Sbjct: 482 MLRDGLQPTHGSFIGILLACTHAGLVDKGLEYFESMEHVYGLRPEMKHYGCVVDLLSRSG 541
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L+ AY FI +P D + LLS C ++ N LAEI +L E DP V+LSN
Sbjct: 542 ELDRAYEFIKQMPVVPDVVLWRILLSACKLHRNLVLAEIATSKLLELDPSNSGNYVLLSN 601
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
TYA RWDD ++RD +V ++K + SW S
Sbjct: 602 TYAGSDRWDDASRMRDLMVVGDVQKPS--SWSS 632
>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 835
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/527 (29%), Positives = 266/527 (50%), Gaps = 1/527 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA + K+ + D + A LV +Y +P A ++F + + WNS++ +
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+++A F +L LKPD + I A L + +H AI +G + + +
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ Y+K + + FD ++ DL+ + +G+A + ++L+L + G
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D + ++ + L + IHG+ ++ S + + ++ +Y C ++ A +F
Sbjct: 361 DATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGIIDYAVRIF 419
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
S+ D+V+W+++I+ Y G KAL F + G + D V + S+L+A + +
Sbjct: 420 ESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLK 479
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IHG++I+ GF L +S+ LVDMY++CG + ++F RN+I + ++I G
Sbjct: 480 KGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRNLILWTAMISAYG 539
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+HG+ A E F + ++ + PD TF ALL AC H GLVN+G+ M EY ++
Sbjct: 540 MHGYGEAAVELFMRMKDEKIIPDHITFLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWP 599
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY +V LLG LEEAY + S+ P V ALL C I+ N ++ E+ A +L E
Sbjct: 600 EHYTCLVDLLGRRNCLEEAYQIVKSMQNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLE 659
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
D V++SN +A +GRW DV ++R + +GL K G SW+
Sbjct: 660 LDLDNPGNYVLVSNVFAANGRWKDVEEVRMRMKGSGLTKNPGCSWIE 706
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 137/472 (29%), Positives = 238/472 (50%), Gaps = 4/472 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS-VFLWNSIIRAYALA 82
E+H L K F LV LYA N + AR LFD+ R+ V WNSII AY+
Sbjct: 79 EIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGN 138
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A LF +L+ + + +T+A +AC ++S + +H + SG D +
Sbjct: 139 GMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRVLDVYVA 198
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ALV Y + + EA +F + D+V NSM++GF G + ++L+ F +
Sbjct: 199 NALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLK 258
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ +++ +I L G+ IH + +K+ FDS V + L+ MYA+C CM+
Sbjct: 259 PDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCCCMSYGGRA 318
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + H DL++W+ GY+Q Y +AL R+L M+G D +I S+L A +
Sbjct: 319 FDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDVDATMIGSILLACRGLNCL 378
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
IHGY I+ G V+ + ++D+Y +CG + +++FE++ ++++++ S+I
Sbjct: 379 GKIKEIHGYTIRGGLSDPVL-QNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCY 437
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+G +A E F + E GL PD T ++L A C + G+EI + + G +
Sbjct: 438 VHNGLANKALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRK-GFILE 496
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+V + G++E+AY I++ K + + A++S ++G + A
Sbjct: 497 GSISNTLVDMYARCGSVEDAYK-IFTCTKNRNLILWTAMISAYGMHGYGEAA 547
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/372 (30%), Positives = 196/372 (52%), Gaps = 1/372 (0%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y + A ++FDK +RS+F WN+++ Y A +++ + + D++T
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV- 165
+ + +AC DL +HG AI G ++LV Y+K + I+ A K+FD +
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
D+V NS+IS ++ G ++L LF ML+ G + YT + + S + +G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
IH LKS YV++ LV+MY R M A +F +L D+VTW++++TG+ Q G
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNG 240
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
Y +AL +F L K D V I S++ A+ + + G IH Y I++GF+ +++V +
Sbjct: 241 LYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFDSNILVGN 300
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
L+DMY+KC + G + F+ M+ +++I++ + G + QA E R + +G++
Sbjct: 301 TLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQLQMEGMDV 360
Query: 406 DESTFSALLCAC 417
D + ++L AC
Sbjct: 361 DATMIGSILLAC 372
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 150/282 (53%), Gaps = 1/282 (0%)
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y K + +A +FD +S+ + N+M+ G+ G +L+++ M LG + D YT
Sbjct: 2 YGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYTF 61
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF- 267
L+ L G IHG +K DS+ +V + LV++YA+CN +N A +F+ ++
Sbjct: 62 PVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMYV 121
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
D+V+W+++I+ YS G +AL F ++ G + A+ L A S+ + G
Sbjct: 122 RNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGMQ 181
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IH +++ G L V V++ALV MY + G + +F + ++I+T+NS++ G +G
Sbjct: 182 IHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWNSMLTGFIQNGL 241
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+A EFF D+ L PD+ + +++ A G + +G+EI
Sbjct: 242 YSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEI 283
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 111/230 (48%), Gaps = 10/230 (4%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + A +F+ + + TW+A++ GY G+ AL +R++ G D
Sbjct: 1 MYGKCGSVLDAEMIFDKMSERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSYT 60
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+L A +++ GA IHG I++G + V V ++LV +Y+KC + ++F+ M
Sbjct: 61 FPVLLKACGIVEDLFCGAEIHGLAIKYGCDSFVFVVNSLVALYAKCNDINGARKLFDRMY 120
Query: 369 ERN-IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
RN ++++NS+I +G +A F ++++ G+ + TF+A L AC + G
Sbjct: 121 VRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIKLGM 180
Query: 428 EIFT------RMTEEYGIQAKTEHYIYMVKLLGLA---GNLEEAYSFIWS 468
+I R+ + Y A Y+ K+ A GNLE W+
Sbjct: 181 QIHAAILKSGRVLDVYVANALVAMYVRFGKMPEAAVIFGNLEGKDIVTWN 230
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +L + KE+H + + + + + LV +YA + A +F T R+
Sbjct: 468 ILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYKIFTCTKNRN 527
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ LW ++I AY + A LF + ++ PD+ T+ + ACS
Sbjct: 528 LILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHITFLALLYACS 574
>gi|147780613|emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
Length = 654
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 165/524 (31%), Positives = 259/524 (49%), Gaps = 49/524 (9%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
HA+ K RD F + L+ +Y + P AR +FD P+R+ W ++I YA
Sbjct: 131 HAVAIKMDSCRDVFVGSSLMNMYCKAGLTPEARKVFDTMPERNSVSWATMISGYASQKLA 190
Query: 86 NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSAL 145
+A LF+ + R + + F + + A + + + +H A+ +GL +AL
Sbjct: 191 AEALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNAL 250
Query: 146 VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDE 205
VT Y+K +D+A++ F+ SD + + ++MI+G A G DK+L+LF M G P E
Sbjct: 251 VTMYAKCGSLDDALQTFETSSDKNSITWSAMITGXAQSGDSDKALKLFSSMHLSGIRPSE 310
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
+T VG+I+ + G+ +H + LK F+S YV + LV MYA+C+ + A F+
Sbjct: 311 FTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDY 370
Query: 266 LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG 325
L PD+V W+++I GY Q G+ AL + ++ M+G + + +ASVL A + A + G
Sbjct: 371 LQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQG 430
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
IH +++GF L V + SAL MY+KCG L G VF M R++I++N++I GL +
Sbjct: 431 KQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQN 490
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEH 445
G +A E F ++ +G PD TF +L AC H GLV G F M +E+G+ + EH
Sbjct: 491 GCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRVEH 550
Query: 446 YIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEND 505
Y MV +L AG L+EA F S
Sbjct: 551 YACMVDILSRAGKLKEAIEFTES------------------------------------- 573
Query: 506 PRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ G W+DV ++R + G+ KE G SW+
Sbjct: 574 ------------ATIDHGMWEDVERVRRMMKLRGVSKEPGCSWI 605
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H + K + T LV +YA + + AR FD + + LW S+I Y
Sbjct: 330 KQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGFDYLQEPDIVLWTSMIGGYVQN 389
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
DA SL+ + + P+ T A + +ACS + L + +H + G G +
Sbjct: 390 GENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLEVPIG 449
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL T Y+K + + VF + D++ N+MISG + G ++L+LF+ M G
Sbjct: 450 SALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLSQNGCGKEALELFEEMQLEGTK 509
Query: 203 PDEYTLVGLISGLWEPSLLSVGQG 226
PD T V ++S L+ G G
Sbjct: 510 PDYVTFVNILSACSHMGLVERGWG 533
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S +L + K++HA K + + L +YA L ++F + P R
Sbjct: 417 VLKACSSLAALEQGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARD 476
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V WN++I + +A LF+ + KPD T+ I ACS
Sbjct: 477 VISWNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACS 523
>gi|297816218|ref|XP_002875992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321830|gb|EFH52251.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 721
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/512 (32%), Positives = 268/512 (52%), Gaps = 8/512 (1%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
+V+ YA ++ + AR LFD+ PQ +N++I YA A A LFK + + D
Sbjct: 80 IVKAYAKDSKIHIARQLFDENPQPDTVSYNTLISGYADARETVAAMVLFKRMRELGFEVD 139
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FT + + AC + DL ++ +H A+ G S ++A VT YSK L+ EA+ VF
Sbjct: 140 GFTLSGLIAACCDRVDL--IKQLHCFAVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFY 197
Query: 164 GVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
G+ D V NSMI + K+L L+ M+ G D +TL +++ L L
Sbjct: 198 GMDGLRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLI 257
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARC---NCMNSAYHVFNSLFHPDLVTWSALIT 279
G+ HG +K+ F +V S L+ Y++C + M+ + VF + PDLV W+ +I+
Sbjct: 258 GGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGRDGMSDSEKVFQEILSPDLVLWNTMIS 317
Query: 280 GYSQQGDYGK-ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GYS ++ + A+ FR++ G + D V +A + ++ G IHG I+
Sbjct: 318 GYSMNEEHSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQGKQIHGLAIKSNIP 377
Query: 339 LS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ + V++AL+ +Y K G L +VF+ M E N +++N +I G HG +A ++
Sbjct: 378 SNRISVNNALISLYYKSGNLLDARRVFDRMPELNAVSFNCMIKGYAQHGHGTEALRLYQR 437
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+++ G+ P+ TF A+L AC H G V++G++ F M E + I+ + EHY M+ LLG AG
Sbjct: 438 MLDSGIAPNNITFVAILSACAHCGKVDEGQKYFNTMKETFKIEPEAEHYSCMIDLLGRAG 497
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
LEEA FI ++P ALL C + N LAE A +L P VML+N
Sbjct: 498 KLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAAKELMVMQPLAATPYVMLAN 557
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA+ G+W+++ +R + +RK+ G SW+
Sbjct: 558 MYADAGKWEEMASVRKSMRGKRIRKKPGCSWI 589
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 53/124 (42%), Gaps = 4/124 (3%)
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
+L + +++ G +H ++ S +S+ V++YSKCG L F++ E N
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGCLSYARAAFDSTEEPN 73
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +YN ++ + A R + ++ PD +++ L+ +F
Sbjct: 74 VFSYNVIVKAYAKDSKIHIA----RQLFDENPQPDTVSYNTLISGYADARETVAAMVLFK 129
Query: 432 RMTE 435
RM E
Sbjct: 130 RMRE 133
>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
Length = 1084
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/532 (29%), Positives = 262/532 (49%), Gaps = 24/532 (4%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + +LH+ + KA + D L+ LY + +A ++F+ + +V LWN I+ A
Sbjct: 260 LQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVA 319
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + + LF + ++P+ FTY CI R C+ ++ +H ++ +G D
Sbjct: 320 FGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESD 379
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S L+ YSK +++A +V + + + D+V SMI+G+ + +L F M +
Sbjct: 380 MYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQK 439
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD L ISG + G IH S + + + LV++YARC +
Sbjct: 440 CGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIRE 499
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ F + H D +TW+ L++G++Q G + +AL F +++ G K + S L+A+A
Sbjct: 500 AFSSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASAN 559
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IH VI+ G V +AL+ +Y KCG F MSERN +++N++
Sbjct: 560 LAEIKQGKQIHARVIKTGHSFETEVGNALISLYGKCGSFEDAKMEFSEMSERNEVSWNTI 619
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A +FF + ++GL+ F M+++YG
Sbjct: 620 ITSCSQHGRGLEALDFFDQMKKEGLS------------------------YFKSMSDKYG 655
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + +HY ++ + G AG L+ A F+ +P D V LLS C ++ N ++ E+ A
Sbjct: 656 IRPRPDHYACVIDIFGRAGQLDRAKKFVEEMPIAADAMVWRTLLSACKVHKNIEVGELAA 715
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E +P A V+LSN YA G+W + ++R + D G+RKE G SW+
Sbjct: 716 KHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMRDRGVRKEPGRSWIE 767
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 175/347 (50%), Gaps = 9/347 (2%)
Query: 90 SLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-----VHGGAIVSGLGRDSITSSA 144
SLF + R +AC RAC N G R+ +H AI GLG+D I +
Sbjct: 27 SLFADKARQHGGLGPLDFACALRACRGN----GRRWQVVPEIHAKAITRGLGKDRIVGNL 82
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ YSK L+ A +VF+ +S D V +M+SG+A G +++L L+ M R G P
Sbjct: 83 LIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPT 142
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
Y L ++S + L + G+ +H K F S +V + L+++Y RC A VF
Sbjct: 143 PYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFY 202
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ H D VT++ LI+G++Q AL F ++ G D V I+S+LAA A ++
Sbjct: 203 DMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQK 262
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H Y+ + G ++ +L+D+Y KCG + + +F + N++ +N +++ G
Sbjct: 263 GTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQ 322
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++FE F + G+ P++ T+ +L C G ++ G +I +
Sbjct: 323 INDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEIDLGEQIHS 369
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 113/444 (25%), Positives = 207/444 (46%), Gaps = 1/444 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
++ + +HA K + F L+ LY A +F P R +N++I
Sbjct: 159 FAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISG 218
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+A A +F+ + + L PD T + + AC+ DL +H +G+ D
Sbjct: 219 HAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSD 278
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
I +L+ Y K ++ A+ +F+ + ++VL N ++ F KS +LF M
Sbjct: 279 YIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQT 338
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G P+++T ++ + +G+ IH +K+ F+S YVS VL+ MY++ +
Sbjct: 339 AGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEK 398
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A V L D+V+W+++I GY Q AL F+++ G D + +AS ++ A
Sbjct: 399 ARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAG 458
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH V G+ V + +ALV++Y++CG + FE + ++ IT+N +
Sbjct: 459 IKAMRQGLQIHARVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGL 518
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ G G +A + F + + G+ + TF + L A + + G++I R+ + G
Sbjct: 519 VSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-G 577
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEA 462
+TE ++ L G G+ E+A
Sbjct: 578 HSFETEVGNALISLYGKCGSFEDA 601
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 201/441 (45%), Gaps = 1/441 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
E+HA L +D L+ LY+ N ++ AR +F++ R W +++ YA
Sbjct: 63 EIHAKAITRGLGKDRIVGNLLIDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNG 122
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A L++ + R + P + + + +C++ R VH G ++ +
Sbjct: 123 LGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGN 182
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+T Y + A +VF + D V N++ISG A C + +L++F+ M G +P
Sbjct: 183 ALITLYLRCGSFRLAERVFYDMPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSP 242
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D T+ L++ L G +H + K+ S + L+ +Y +C + +A +F
Sbjct: 243 DCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETALVIF 302
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
N ++V W+ ++ + Q D K+ F ++ G + + +L + +
Sbjct: 303 NLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRTCTCTGEID 362
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH ++ GFE + VS L+DMYSK G+L +V E + E++++++ S+I G
Sbjct: 363 LGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYV 422
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
H + A F+++ + G+ PD ++ + C + G +I R+ G
Sbjct: 423 QHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHARVYVS-GYSGDV 481
Query: 444 EHYIYMVKLLGLAGNLEEAYS 464
+ +V L G + EA+S
Sbjct: 482 SIWNALVNLYARCGRIREAFS 502
>gi|449457225|ref|XP_004146349.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Cucumis sativus]
Length = 781
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 296/579 (51%), Gaps = 40/579 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV--LPSARILFDKTPQR 67
+E ++ +S+ + K++ + + + L D KL+ A +++ L A +F+
Sbjct: 147 IECLRNCKSMDQLKQIQSQIFRIGLEGDRDTINKLMAFCADSSLGNLRYAEKIFNYVQDP 206
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
S+F++N +++ YA LF+ L L PD FTY + +A D+ V
Sbjct: 207 SLFVYNVMVKMYAKRGILRKVLLLFQQLREDGLWPDGFTYPFVLKAIGCLRDVRQGEKVR 266
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + +G+ D+ ++L+ Y +LS ++ A K+FD ++ D V N MISG+ C ++
Sbjct: 267 GFIVKTGMDLDNYVYNSLIDMYYELSNVENAKKLFDEMTTRDSVSWNVMISGYVRCRRFE 326
Query: 188 KSLQLFDWMLRLG-KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ F M + G + PDE T+V +S L +G IH + ++ + + L
Sbjct: 327 DAINTFREMQQEGNEKPDEATVVSTLSACTALKNLELGDEIHNY-VRKELGFTTRIDNAL 385
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD-------------------- 286
+ MYA+C C+N A ++F+ + +++ W+++I+GY GD
Sbjct: 386 LDMYAKCGCLNIARNIFDEMSMKNVICWTSMISGYINCGDLREARDLFDKSPVRDVVLWT 445
Query: 287 -----------YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+ A+ FR++ +Q K D + ++L A+ + G IHGY+ ++
Sbjct: 446 AMINGYVQFHHFDDAVALFREMQIQRVKPDKFTVVTLLTGCAQLGALEQGKWIHGYLDEN 505
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
+ V+V +AL++MYSKCG + +++F + +++ ++ S+I GL ++G T +A F
Sbjct: 506 RITMDVVVGTALIEMYSKCGCVDKSLEIFYELEDKDTASWTSIICGLAMNGKTSEALRLF 565
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
++ G PD+ TF +L AC HGGLV +GR F M + + I+ K EHY ++ LLG
Sbjct: 566 SEMERVGAKPDDITFIGVLSACSHGGLVEEGRRFFNSMKKVHRIEPKVEHYGCVIDLLGR 625
Query: 456 AGNLEEAYSFIWSLP----KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
AG L+EA I +P + V P + GALLS C I+ N D+ E +A +L + +
Sbjct: 626 AGLLDEAEELIQEIPIENCEIVVP-LYGALLSACRIHNNVDMGERLAKKLENIESCDSSI 684
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L+N YA RW+D K+R + + G++K G S +
Sbjct: 685 HTLLANIYASVDRWEDAKKVRRKMKELGVKKMPGCSLIE 723
>gi|255565124|ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537116|gb|EEF38749.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 611
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 181/613 (29%), Positives = 295/613 (48%), Gaps = 76/613 (12%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + +SL K++H + + +DPF TKL+++YA + L SA+ LFDK PQ +
Sbjct: 1 MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKMPQPN 60
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V+ W +I Y ++ + + + + PDN+ + + RAC++ G ++H
Sbjct: 61 VYAWTAIFGFYLRHGMYDKCVQNYGFMKYSDVLPDNYVFPKVLRACTQLLWFEGGIWIHK 120
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
IV G + ++L+ Y K A VF+ + + DL NSMISG+ G D
Sbjct: 121 DVIVCGCESNLQVCNSLIDMYVKCGNARSARLVFEEMEERDLFSWNSMISGYVSNGLADL 180
Query: 189 SLQLFDWMLRLGKTP---------DEYTLVGLISGLWE-------PSLLSVGQ------- 225
+++L + M G P D Y +G WE P+++S
Sbjct: 181 AVELLNCMRLDGFEPDVVTWNTLMDAYCQMGRFDEAWEVLKQIEQPNIISWTTLISSYSK 240
Query: 226 -GIHGFCLKSSFD---------SYDYVSSVLVS--------------------------- 248
G H L+ D D + SVLVS
Sbjct: 241 IGEHDMSLRVFQDMIIREVVSPDLDCLCSVLVSCRHIGALRSGKEIHGYGTKMETNTVFY 300
Query: 249 ---------MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
MYA+C + A +VF + D+VTW+A+I G+ + +A+ FR++
Sbjct: 301 SSAGAALLTMYAKCGRIQDAINVFELMDKSDIVTWNAMILGFVELDLGKQAIECFREMQR 360
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS--VMVSSALVDMYSKCGYL 357
K D I+++L ++ G IH YV + LS V V +A++ MY KCG +
Sbjct: 361 MDIKNDQTTISTILPV----CDLQYGNPIHAYV-RKSITLSSVVTVWNAVIHMYCKCGCV 415
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+F +M ++++++N++I G G+HG A + +++I G+ P+ +TF+++L AC
Sbjct: 416 RSAYTIFCSMPNKDVVSWNTMIGGFGMHGHGQAALKLLKEMILSGIFPNSTTFTSVLSAC 475
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H GLV++G +F MTE+Y I + EHY +V +L AG +A +FI +P D ++
Sbjct: 476 SHSGLVDEGFRLFRSMTEDYSITPRMEHYSCIVDMLARAGQFADAVTFIHKMPLEPDKSI 535
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
GALL+ C Y N D + A QL +P+ + V LSN YA GRWDD ++R +I
Sbjct: 536 WGALLAACRAYQNLDFGRLAAEQLIRMEPKCAGHYVTLSNIYARAGRWDDAGRVRKEIEG 595
Query: 538 NGLRKEAGVSWVS 550
GL K +G S +
Sbjct: 596 KGLVKPSGQSLIE 608
>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Vitis vinifera]
Length = 1053
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/445 (34%), Positives = 252/445 (56%), Gaps = 3/445 (0%)
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
+ +T S+ + G R VH I + + L+ Y+K + +A +V D + +
Sbjct: 482 SVLTECISQTAIREGQR-VHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPE 540
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
++V +MISG++ G+ ++L LF ML G P+E+T +++ S +G+ I
Sbjct: 541 RNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQI 600
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
H +K+SF+S+ +V S L+ MYA+ + A VF+ L D+V+ +A+I+GY+Q G
Sbjct: 601 HSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLD 660
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
+AL FR+L +G +++ V ASVL A + A + G +H +V++ V++ ++L
Sbjct: 661 EEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSL 720
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPD 406
+DMYSKCG L ++F++M ER +I++N++++G HG +A E F+ + E+ + PD
Sbjct: 721 IDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPD 780
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEY-GIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
TF A+L C HGG+ + G EIF M + G + + EHY +V L G AG +EEA+ F
Sbjct: 781 SVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAFEF 840
Query: 466 IWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRW 525
I +P A+ G+LL C ++ N + E VA +L E + V+LSN YA GRW
Sbjct: 841 IKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRW 900
Query: 526 DDVMKLRDDIVDNGLRKEAGVSWVS 550
DDV +R+ + + + KE G SW+
Sbjct: 901 DDVRTVRELMKEKAVIKEPGRSWIE 925
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 213/458 (46%), Gaps = 37/458 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++ + +HA + K + T+L+ LY L AR + D+ P+R+
Sbjct: 483 VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMPERN 542
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++I Y+ ++A LF +L + P+ FT+A + +C+ +S R +H
Sbjct: 543 VVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHS 602
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + S+L+ Y+K I EA +VFDG+ + D+V C ++ISG+A G ++
Sbjct: 603 LVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLGLDEE 662
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF + R G + T +++ L + L G+ +H L++ Y + + L+
Sbjct: 663 ALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQNSLID 722
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MY++C + + +F+S+ +++W+A++ GYS+ G +A+ F+ + + K K D V
Sbjct: 723 MYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSV 782
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+VL+ + HG + G E+ + + K G+
Sbjct: 783 TFLAVLSGCS-----------HGGMEDRGLEIFYEM------VNQKDGF----------- 814
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E I Y V+ G G +AFEF + + P + + +LL AC V+ G
Sbjct: 815 -EPEIEHYGCVVDLFGRAGRVEEAFEFIKKM---PFEPTAAIWGSLLGACRVHQNVHIGE 870
Query: 428 EIFTRMTEEYGIQAKTE-HYIYMVKLLGLAGNLEEAYS 464
+ R+ E I+++ +Y+ + L AG ++ +
Sbjct: 871 FVARRLLE---IESENAGNYVILSNLYASAGRWDDVRT 905
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ +QG + + SVL + G +H ++I+ +E V + + L+ +Y+KC
Sbjct: 467 EMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCR 526
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
LG +V + M ERN++++ ++I G G+ +A F +++ G P+E TF+ +L
Sbjct: 527 CLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 586
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPK 471
+C GR+I + + I+ E +I+ ++ + AG + EA LP+
Sbjct: 587 SCTSSSGFQLGRQIHSLV-----IKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPE 641
>gi|449450760|ref|XP_004143130.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
gi|449496662|ref|XP_004160192.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g59600-like [Cucumis sativus]
Length = 547
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 273/545 (50%), Gaps = 36/545 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
++E ++ L+ + LHA + R +A K + YA + ARILFDK P+ +
Sbjct: 34 LIETCGRNRDLNFGRSLHARLIIDGSARLTHFAAKFIAFYAACGKIKDARILFDKIPRTN 93
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
W +I AY+ + +A S+F L R L+P + + +AC S+ R +H
Sbjct: 94 PRRWIVLIGAYSRCGYYPEALSVFCELQRGGLRPSEYIIPSVLKACGHLSEKTTGRKLHT 153
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + L D+ SAL+ Y+K +++A +VF+ ++ DLV N+M+SG+AH G ++
Sbjct: 154 LILKNSLESDAYVCSALIDMYAKSGEVEKARRVFESMAGKDLVALNAMVSGYAHHGLAEE 213
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L L + M LG P+ T L++G S + V +
Sbjct: 214 ALNLVEEMQVLGIKPNLVTWNTLVTGF------------------SQIGEEEMVRELFKE 255
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
M A + PD+V+W+++I+G+ Q +A FR++ G
Sbjct: 256 MEA-------------NGIEPDVVSWTSVISGFVQNFRNEEAFDTFRRMLNAGFHPTSAT 302
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
I+S+L A A N G IHG+ + G E V V +ALVDMY+KCGY +F MS
Sbjct: 303 ISSLLPACASVGNGRCGKEIHGHSLALGVEKDVYVRTALVDMYAKCGYFYEAKILFWRMS 362
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFF---RDIIEKGLNPDESTFSALLCACCHGGLVND 425
ERN T+NS+I G HG+ +A E F +D EK L D TF+A+L AC H GLV+
Sbjct: 363 ERNSATWNSMIFGYANHGYCNEAIELFHQMKDDDEKKL--DHLTFTAILTACAHAGLVDL 420
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR +F M +YGI + EHY MV + G AG L EAY I ++P D V GALL C
Sbjct: 421 GRSLFQLMQSKYGIVPRVEHYACMVDVFGRAGKLAEAYDLIKTMPVKPDLYVWGALLGAC 480
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
+G +LAE A L E +P ++LS+ YA G W V+KL+ + ++K G
Sbjct: 481 RKHGEIELAEEAAKHLSELEPGSVGNSLLLSDIYANAGSWGHVVKLKKMMKKRKMKKFPG 540
Query: 546 VSWVS 550
SW+
Sbjct: 541 CSWIE 545
>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 752
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 159/526 (30%), Positives = 261/526 (49%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K+ L+ F ++ L+ +Y + +F K +R+V W +II A
Sbjct: 179 LHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGY 238
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A F + +++ D+ T+A +A +++S L + +H I G S +
Sbjct: 239 NMEALLYFSEMWISKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 298
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L T Y+K D +++F+ + PD+V ++I+ + G + +++ F M + +P+
Sbjct: 299 LATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPN 358
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+YT +IS ++ G+ IHG L+ V++ +V++Y++ + SA VF+
Sbjct: 359 KYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFH 418
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+++WS +I YSQ G +A Y + +G K + ++SVL+ A +
Sbjct: 419 GITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 478
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H +V+ G + MV SAL+ MYSKCG + ++F M NII++ ++I G
Sbjct: 479 GKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAE 538
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG++ +A F I GL PD TF +L AC H G+V+ G F MT EY I E
Sbjct: 539 HGYSQEAINLFEKISSVGLKPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKE 598
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY ++ LL AG L EA I S+P D V LL C ++G+ D A QL
Sbjct: 599 HYGCIIDLLCRAGRLSEAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRL 658
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
DP + L+N YA GRW + +R + G+ KE G SWV+
Sbjct: 659 DPNSAGTHIALANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVN 704
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 210/412 (50%), Gaps = 6/412 (1%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITR 112
L +R +FDK R W ++I Y A +A LF N+ ++ L+ D F + +
Sbjct: 106 LCKSRYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVQPGLQRDQFMISVALK 165
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
AC ++ +HG ++ SGL SSAL+ Y K+ I++ +VF ++ ++V
Sbjct: 166 ACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKVGKIEQGCRVFKKMTKRNVVS 225
Query: 173 CNSMISGFAHCGFWDKSLQLFD--WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
++I+G H G+ ++L F W+ ++G D +T + + SLL G+ IH
Sbjct: 226 WTAIIAGLVHAGYNMEALLYFSEMWISKVGY--DSHTFAIALKASADSSLLHHGKAIHTQ 283
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
+K FD +V + L +MY +C + +F + PD+V+W+ LIT Y Q+G+ A
Sbjct: 284 TIKQGFDESSFVINTLATMYNKCGKADYVMRLFEKMKMPDVVSWTTLITTYVQKGEEEHA 343
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
+ F+++ + A+V++A A A G IHG+V++ G ++ V++++V +
Sbjct: 344 VEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDALSVANSIVTL 403
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
YSK G L VF ++ ++II+++++I G+ +AF++ + +G P+E
Sbjct: 404 YSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYAKEAFDYLSWMRREGPKPNEFAL 463
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
S++L C L+ G+++ + GI + + ++ + G++EEA
Sbjct: 464 SSVLSVCGSMALLEQGKQVHAHVL-CIGIDHEAMVHSALISMYSKCGSVEEA 514
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 136/281 (48%), Gaps = 10/281 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V + L+ A +V LY+ + +L SA ++F ++ + W++II Y+
Sbjct: 379 EQIHGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQG 438
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A + R KP+ F + + C + L + VH + G+ +++
Sbjct: 439 GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVH 498
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL++ YSK ++EA K+F+G+ +++ +MI+G+A G+ +++ LF+ + +G
Sbjct: 499 SALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLK 558
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS-----VLVSMYARCNCMN 257
PD T +G+++ ++ + G + F L + + Y S ++ + R ++
Sbjct: 559 PDYVTFIGVLTACSHAGMVDL--GFYYFMLMT--NEYQISPSKEHYGCIIDLLCRAGRLS 614
Query: 258 SAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
A H+ S+ + D V WS L+ GD + + +L
Sbjct: 615 EAEHMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQL 655
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S L + K++HA V + + + L+ +Y+ + A +F+ +
Sbjct: 466 VLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSALISMYSKCGSVEEASKIFNGMKINN 525
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ W ++I YA +A +LF+ + LKPD T+ + ACS
Sbjct: 526 IISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLTACS 572
>gi|357122034|ref|XP_003562721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g25970-like [Brachypodium distachyon]
Length = 689
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 172/531 (32%), Positives = 276/531 (51%), Gaps = 7/531 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+L +L K+ L + F A+ L+ +YA + AR +FD P+R+ WN++I Y +
Sbjct: 112 QLQSLAFKSGLADNVFAASALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESG 171
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ A LF N+ +L PD T+A + A ++S+ + +HG + G S+
Sbjct: 172 KVLQALELFINMETERLVPDEATFAALLTAF-DDSNYFLMHQLHGKIVKYGSALGLTVSN 230
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GK 201
A +TAYS+ + E+ ++FD + D DL+ N+M+ + + G ++ F M+R G
Sbjct: 231 AAITAYSQCGALAESRRIFDQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGV 290
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--NCM-NS 258
D Y+ +IS E G+ IHG +K+ + V + L++MY R NCM
Sbjct: 291 QLDMYSFTSIISTCPEHDDHQ-GRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMED 349
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A F+SL D V+W++++TGYSQ AL +FR + + D ++ L + ++
Sbjct: 350 ACKCFDSLLIKDTVSWNSMLTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSE 409
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G IHG +I GF + VSS+L+ MYSK G L + FE + + + +NS+
Sbjct: 410 LAVLQLGRQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSM 469
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G HG + F +++E + D TF L+ +C H GLV++G EI M YG
Sbjct: 470 IFGYAQHGHAHIVHSLFNEMVELKVPLDHVTFVGLITSCSHAGLVDEGSEILNAMETRYG 529
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I + EHY V L G AG LE+A I S+P D V LL C I+GN +LA VA
Sbjct: 530 IPLRMEHYACGVDLYGRAGQLEKAKELIDSMPFEPDAMVWMTLLGACRIHGNMELASEVA 589
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L ++P++ + ++LS+ Y+ G W D ++ ++ + GL K G SW+
Sbjct: 590 SHLLVSEPKQHSTYILLSSMYSGLGMWSDRAIVQREMKNRGLSKVPGWSWI 640
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 204/411 (49%), Gaps = 11/411 (2%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
HA + K+ ++ P +L+ Y+L+ + L +AR +FD+ P+ WNS++ A+ A
Sbjct: 13 HATLLKSCII-SPTRWNQLLTAYSLSPLGLAAARRVFDEIPRPDAASWNSLLTAHVSAGA 71
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFVHGGAIVSGLGRDSITSS 143
A L + + + + F R+ + + P L + A SGL + +S
Sbjct: 72 HPAAWCLLRAMHAQGVAANTFALGSSLRSAAA-ARCPALGAQLQSLAFKSGLADNVFAAS 130
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+ Y+K + +A +VFDG+ + + V N++I+G+ G ++L+LF M P
Sbjct: 131 ALLHMYAKCGRVRDARRVFDGMPERNTVSWNALIAGYVESGKVLQALELFINMETERLVP 190
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
DE T L++ + + + Q +HG +K VS+ ++ Y++C + + +F
Sbjct: 191 DEATFAALLTAFDDSNYFLMHQ-LHGKIVKYGSALGLTVSNAAITAYSQCGALAESRRIF 249
Query: 264 NSLFHP-DLVTWSALITGYSQQG-DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+ + DL++W+A++ Y+ G DY ++ R + G + D S+++ + +
Sbjct: 250 DQIGDSRDLISWNAMLGAYTYHGMDYDAMGFFVRMIRESGVQLDMYSFTSIISTCPEHDD 309
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG---YLGLGIQVFETMSERNIITYNSV 378
G IHG VI++G E + V +AL+ MY++ + + F+++ ++ +++NS+
Sbjct: 310 -HQGRAIHGLVIKNGLEGATPVCNALIAMYTRISGNCMMEDACKCFDSLLIKDTVSWNSM 368
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ G H + A FFR + + DE FSA L +C ++ GR+I
Sbjct: 369 LTGYSQHNLSADALRFFRCMQSANIRCDEYAFSAALRSCSELAVLQLGRQI 419
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 48/93 (51%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H + + + F ++ L+ +Y+ + +L A+ F++ + S WNS+I YA
Sbjct: 417 RQIHGSIIHSGFASNNFVSSSLIFMYSKSGILDDAKKSFEEADKGSSVPWNSMIFGYAQH 476
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ SLF ++ ++ D+ T+ + +CS
Sbjct: 477 GHAHIVHSLFNEMVELKVPLDHVTFVGLITSCS 509
>gi|242075862|ref|XP_002447867.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
gi|241939050|gb|EES12195.1| hypothetical protein SORBIDRAFT_06g017170 [Sorghum bicolor]
Length = 688
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 185/611 (30%), Positives = 293/611 (47%), Gaps = 71/611 (11%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVF 70
+L +S +LS + HA + K+ + + F LV YA L AR +FD+ P R+ F
Sbjct: 25 DLLRSAPNLSGARAAHARILKSPVAGETFLLNTLVSTYARLGRLRDARRVFDEIPLRNTF 84
Query: 71 LWNSIIRAYALAHRFNDAKSLFK--------------------------NLLR--TQLKP 102
+N+++ AYA R ++A++LF+ + LR +
Sbjct: 85 SYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAADALRFLAAMHA 144
Query: 103 DNF-----TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
D+F ++A AC+ D VHG S D SALV Y+K ++
Sbjct: 145 DDFVLNAYSFASALSACAAEKDSRTGEQVHGLVARSPHADDVHIRSALVDMYAKCERPED 204
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +VFD + + ++V NS+I+ + G ++L LF M+ G +PDE TL ++S
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALMLFVEMMAAGFSPDEVTLSSVMSACAG 264
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARC------NCM-------------- 256
+ G+ +H +K D V ++ LV MYA+C C+
Sbjct: 265 LAADREGRQVHAHMVKCDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSIVSETS 324
Query: 257 -----------NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
A VF+ + +++ W+ LI Y+Q G+ +A+ F +L
Sbjct: 325 ILTGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGL 359
+VL A A++ G H +V++ GF E V V ++LVDMY K G +
Sbjct: 385 HYTYGNVLNACGNIADLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
G +VFE M+ R+ +++N++I+G +G A F ++ NPD T +L AC H
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV++GR F MTE++GI +HY MV LLG AG+L+EA I +P D +
Sbjct: 505 SGLVDEGRRYFHSMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELINDMPMEPDSVLWA 564
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
+LL C ++ N +L E A +LFE DP+ V+LSN YAE G+W +V ++R + D G
Sbjct: 565 SLLGACRLHKNVELGEWTAGRLFELDPQNSGPYVLLSNMYAEMGKWAEVFRVRRSMKDRG 624
Query: 540 LRKEAGVSWVS 550
+ K+ G SW+
Sbjct: 625 VSKQPGCSWIE 635
>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
Length = 897
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 269/534 (50%), Gaps = 2/534 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L KELH+ K++ D T + +YA + A+ + P+ S+ +N+II
Sbjct: 297 ALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIV 356
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLG 136
YA + R A F+ LL+T L D T + AC+ DL G R VHG A+ S
Sbjct: 357 GYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEG-RQVHGLAVKSISM 415
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ ++A++ Y K + EA +FD + D V N++I+ G +++L F M
Sbjct: 416 SNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETLAHFASM 475
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ PD++T ++ L+ G IH +KS +V + LV MY +C +
Sbjct: 476 IHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMI 535
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A + + +V+W+A+I+G+S A +F ++ G D A+VL
Sbjct: 536 EKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTC 595
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A V G IH +I+ + V + S LVDMYSKCG + +FE R+ +T+N
Sbjct: 596 ANLATVGLGKQIHAQIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWN 655
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+++ G HG +A + F + + P+ +TF ++L AC H GLV+ G F M E
Sbjct: 656 AMLCGYAHHGLGEEALKLFESMQLVNVKPNHATFVSVLRACAHMGLVDKGLHYFDVMLSE 715
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
YG+ ++EHY MV +LG +G ++EA + + +P D + LLS C I+GN ++AE
Sbjct: 716 YGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEK 775
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L + DP+ + V+LSN YA+ G W +V ++R + N L+KE G SW+
Sbjct: 776 ATRALLQLDPQDSSACVLLSNIYADAGMWGNVSEMRKMMRHNKLKKEPGCSWIE 829
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 216/449 (48%), Gaps = 5/449 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H LV K D + L+ +YA L + +F + P+++ W+++I
Sbjct: 202 QVHGLVVKFGFDCDVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQND 261
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + LFK + + YA + R+C+ S L + +H A+ S G D I +
Sbjct: 262 RNVEGLELFKEMQGVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGT 321
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A + Y+K + +A KV + L N++I G+A ++L+ F +L+ G
Sbjct: 322 ATLDMYAKCGRMADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGF 381
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
DE TL G ++ G+ +HG +KS S V++ ++ MY +C + A +F
Sbjct: 382 DEITLSGALNACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLF 441
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + D V+W+A+I Q G+ + L +F + + D SVL A A +
Sbjct: 442 DMMERRDAVSWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALN 501
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH +I+ G V +ALVDMY KCG + ++ + ++ ++++N++I G
Sbjct: 502 TGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFS 561
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
L + A +FF ++E G+NPD T++A+L C + V G++I ++ ++ + ++
Sbjct: 562 LLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQ---ELQS 618
Query: 444 EHYI--YMVKLLGLAGNLEEAYSFIWSLP 470
+ YI +V + GN++++ P
Sbjct: 619 DVYICSTLVDMYSKCGNMQDSQLMFEKAP 647
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 111/403 (27%), Positives = 194/403 (48%), Gaps = 4/403 (0%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
LRD ++ YA + AR F + P+R V WNS+I + + +F
Sbjct: 112 LRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVISGFLQNGECRKSIDVFLE 171
Query: 95 LLRTQLKPDNFTYACITRACS--ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL 152
+ R + D + A + +AC E D+ G++ VHG + G D +T SAL+ Y+K
Sbjct: 172 MGRCGVGFDRASLAVVLKACGALEECDM-GVQ-VHGLVVKFGFDCDVVTGSALLGMYAKC 229
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
+D+++ VF + + + V ++MI+G + L+LF M +G + L
Sbjct: 230 KRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQGVGVGVSQSIYASLF 289
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
S L +G+ +H LKS+F S V + + MYA+C M A V +S+ L
Sbjct: 290 RSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMADAQKVLSSMPKCSLQ 349
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+++A+I GY++ +AL F+ L G D + ++ L A A G +HG
Sbjct: 350 SYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACASIRGDLEGRQVHGLA 409
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
++ ++ V++A++DMY KC L +F+ M R+ +++N++I +G +
Sbjct: 410 VKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAVSWNAIIAACEQNGNEEETL 469
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
F +I + PD+ T+ ++L AC +N G EI TR+ +
Sbjct: 470 AHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRIIK 512
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/449 (26%), Positives = 202/449 (44%), Gaps = 53/449 (11%)
Query: 92 FKNLLRTQLKPDN--FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY 149
F L + Q +P T++ I + CS+ + L + H I G + S+ L+ Y
Sbjct: 35 FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94
Query: 150 SKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD---------------------- 187
K +D A KVFD + D+V NS+ISG+A CG D
Sbjct: 95 IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154
Query: 188 ---------KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
KS+ +F M R G D +L ++ +G +HG +K FD
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDC 214
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
S L+ MYA+C ++ + VF+ L + V+WSA+I G Q + L F+++
Sbjct: 215 DVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQ 274
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
G + AS+ + A + + G +H + ++ F ++V +A +DMY+KCG +
Sbjct: 275 GVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKCGRMA 334
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL--CA 416
+V +M + ++ +YN++I+G +QA + F+ +++ GL DE T S L CA
Sbjct: 335 DAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNACA 394
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYI------YMVKLLGLAGNLEEAYSFIWSLP 470
G L +GR++ +G+ K+ ++ + G L EA S ++ +
Sbjct: 395 SIRGDL--EGRQV-------HGLAVKSISMSNICVANAILDMYGKCKALAEA-SDLFDMM 444
Query: 471 KPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ D A+++ C GN + E +AH
Sbjct: 445 ERRDAVSWNAIIAACEQNGNEE--ETLAH 471
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 152/321 (47%), Gaps = 10/321 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ Q+L+ E+H + K+ + D F LV +Y ++ A + D+T Q++
Sbjct: 490 VLKACAGRQALNTGMEIHTRIIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKT 549
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+II ++L + DA F +L + PDNFTYA + C+ + + + +H
Sbjct: 550 MVSWNAIISGFSLLQQSEDAHKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHA 609
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I L D S LV YSK + ++ +F+ + D V N+M+ G+AH G ++
Sbjct: 610 QIIKQELQSDVYICSTLVDMYSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEE 669
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS---SV 245
+L+LF+ M + P+ T V ++ L V +G+H F + S D S S
Sbjct: 670 ALKLFESMQLVNVKPNHATFVSVLRACAHMGL--VDKGLHYFDVMLSEYGLDPQSEHYSC 727
Query: 246 LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY---GKALYYFRKLNMQG 301
+V + R ++ A ++ + F D V W L++ G+ KA +L+ Q
Sbjct: 728 MVDILGRSGRIDEALNLVQKMPFEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQD 787
Query: 302 KKADPVLIASVLAAAAKSANV 322
A VL++++ A A NV
Sbjct: 788 SSA-CVLLSNIYADAGMWGNV 807
>gi|356502573|ref|XP_003520093.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Glycine max]
Length = 503
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 247/465 (53%), Gaps = 10/465 (2%)
Query: 93 KNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL 152
+ LLR +L D+F Y + C ++ + H +V G +D ++ L+ YS
Sbjct: 9 QQLLRPKLHKDSFYYTELLNLCKTTDNV---KKAHAQVVVRGHEQDPFIAARLIDKYSHF 65
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
S +D A KVFD +S+PD+ CN +I +A+ + ++L+++D M G TP+ YT ++
Sbjct: 66 SNLDHARKVFDNLSEPDVFCCNVVIKVYANADPFGEALKVYDAMRWRGITPNYYTYPFVL 125
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
G+ IHG +K D +V + LV+ YA+C + + VF+ + H D+V
Sbjct: 126 KACGAEGASKKGRVIHGHAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIV 185
Query: 273 TWSALITGYSQQGDYGKALYYF----RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
+W+++I+GY+ G A+ F R ++ G D +VL A A++A++ G I
Sbjct: 186 SWNSMISGYTVNGYVDDAILLFYDMLRDESVGG--PDHATFVTVLPAFAQAADIHAGYWI 243
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
H Y+++ L V + L+ +YS CGY+ + +F+ +S+R++I ++++I G HG
Sbjct: 244 HCYIVKTRMGLDSAVGTGLISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLA 303
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
+A FR ++ GL PD F LL AC H GL+ G +F M E YG+ HY
Sbjct: 304 QEALALFRQLVGAGLRPDGVVFLCLLSACSHAGLLEQGWHLFNAM-ETYGVAKSEAHYAC 362
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
+V LLG AG+LE+A FI S+P + GALL C I+ N +LAE+ A +LF DP
Sbjct: 363 IVDLLGRAGDLEKAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDN 422
Query: 509 GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
V+L+ Y + RW D ++R + D ++K G S V S
Sbjct: 423 AGRYVILAQMYEDAERWQDAARVRKVVKDKEIKKPIGYSSVELES 467
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 175/363 (48%), Gaps = 2/363 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
F EL ++ K+ HA V +DPF A +L+ Y+ + L AR +FD +
Sbjct: 21 FYYTELLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLIDKYSHFSNLDHARKVFDNLSE 80
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
VF N +I+ YA A F +A ++ + + P+ +TY + +AC R +
Sbjct: 81 PDVFCCNVVIKVYANADPFGEALKVYDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVI 140
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG A+ G+ D +ALV Y+K ++ + KVFD + D+V NSMISG+ G+
Sbjct: 141 HGHAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMISGYTVNGYV 200
Query: 187 DKSLQLFDWMLRLGKT--PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
D ++ LF MLR PD T V ++ + + + G IH + +K+ V +
Sbjct: 201 DDAILLFYDMLRDESVGGPDHATFVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGT 260
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+S+Y+ C + A +F+ + ++ WSA+I Y G +AL FR+L G +
Sbjct: 261 GLISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRP 320
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D V+ +L+A + + + G + + +G S + +VD+ + G L ++
Sbjct: 321 DGVVFLCLLSACSHAGLLEQGWHLFNAMETYGVAKSEAHYACIVDLLGRAGDLEKAVEFI 380
Query: 365 ETM 367
++M
Sbjct: 381 QSM 383
>gi|357484403|ref|XP_003612489.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513824|gb|AES95447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 955
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/511 (33%), Positives = 270/511 (52%), Gaps = 12/511 (2%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ +Y+ NV+ A +LF T Q + WN++I Y+ + A++LFK LL
Sbjct: 447 LIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCS 506
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF- 162
+ T I +C+ + L + VH + SG ++ ++L+ Y + +
Sbjct: 507 SSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQ 566
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT--PDEYTLVGLISGLWEPSL 220
+ S D+ N++I G + ++L+ F ++R G + D TLV ++S + L
Sbjct: 567 ENSSIADIASWNTIIVGCVRGDQFQEALETF-MLMRQGPSFNYDSITLVNVLSAVANIEL 625
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP--DLVTWSALI 278
L+ G+ +H LKS F S V + L++MY RC +NSA VF FH +L TW+ +I
Sbjct: 626 LNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFK--FHSISNLCTWNCMI 683
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+ S + +AL FR L K + I SVL+A + + G +HGY ++G++
Sbjct: 684 SALSHNKESREALELFRHLQF---KPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQ 740
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ +S+ALVD+YS CG L ++VF S+++ +NS+I G HG +A E F ++
Sbjct: 741 QNSFISAALVDLYSTCGRLDNAVKVFR-HSQKSESAWNSMIAAYGNHGNGEKAIELFHEM 799
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ G+ +STF +LL AC H GLVN G + + M E+YGI+ + EH +Y+V +L +G
Sbjct: 800 CDLGIKVTKSTFVSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGR 859
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
++EAY F L V G LLS C+ +G +L + VA +LFE +P+ Y + L+N
Sbjct: 860 IDEAYQFTKGLQSNASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANM 919
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y G W D LR I D GLRK AG S +
Sbjct: 920 YVAAGSWKDATDLRQYIHDQGLRKCAGYSLI 950
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 210/433 (48%), Gaps = 6/433 (1%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F+L ++LS ++ +H K L +T L LY+ S+R+LF+
Sbjct: 97 FDLVVDCIKLSLEKPNIFTATVVHCAALKTGALAYLPTSTSLFTLYSKAGDFTSSRVLFE 156
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
R V WN+II A + A F+ +++ Q + D+ T + S +
Sbjct: 157 HIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQ 216
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK--VFDGVSDPDLVLCNSMISGF 180
R +H +I SG+ D +AL+ Y+K ++ + +F+ + D+V NS++ G
Sbjct: 217 GRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNSSDSECLFEEMEYKDVVSWNSIMRGC 276
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF--DS 238
+ G +KSL F M + D +L IS L+ G+ IHG +K + +S
Sbjct: 277 LYNGDLEKSLCYFRRMNFSEERADHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNS 336
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+ V++ L+S+Y++C ++ A VF + + D+V+W+A++ GY+ + +A ++
Sbjct: 337 FVSVANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQ 396
Query: 299 MQGK-KADPVLIASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGY 356
G + D V + ++L A+ G IHGY I +H + + + L+DMYSKC
Sbjct: 397 TTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNV 456
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ +F + ++ +++++N++I G + + +A F++++ G N ST A+L +
Sbjct: 457 VEKAELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSS 516
Query: 417 CCHGGLVNDGREI 429
C +N G+ +
Sbjct: 517 CNSANSLNFGKSV 529
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 111/428 (25%), Positives = 204/428 (47%), Gaps = 12/428 (2%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ- 99
A L+ LY+ + A +F + + + WN+++ YA ++A L + T
Sbjct: 341 ANSLISLYSQCEAVDVAETVFREMAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGC 400
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT-SSALVTAYSKLSLIDEA 158
+PD T + C+E R +HG AI + D + + L+ YSK +++++A
Sbjct: 401 FQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLIDMYSKCNVVEKA 460
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F + DLV N+MISG++ +++K+ LF +L G+ T+ ++S
Sbjct: 461 ELLFHSTAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSA 520
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF--NSLFHPDLVTWSA 276
+ L+ G+ +H + LKS F ++ + + L+ MY + S + + NS D+ +W+
Sbjct: 521 NSLNFGKSVHIWQLKSGFLNHTLLVNSLMQMYINSGDLTSGFSILQENSSI-ADIASWNT 579
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGK--KADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+I G + + +AL F L QG D + + +VL+A A + G +H ++
Sbjct: 580 IIVGCVRGDQFQEALETFM-LMRQGPSFNYDSITLVNVLSAVANIELLNQGKSLHSLALK 638
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
F V ++L+ MY +C + +VF+ S N+ T+N +I L + + +A E
Sbjct: 639 SPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISALSHNKESREALEL 698
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
FR + K P+E T ++L AC G++ G+++ T YG Q + +V L
Sbjct: 699 FRHLQFK---PNEFTIVSVLSACTRIGVLIHGKQVHG-YTFRYGYQQNSFISAALVDLYS 754
Query: 455 LAGNLEEA 462
G L+ A
Sbjct: 755 TCGRLDNA 762
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 17/250 (6%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ K LH+L K+ D L+ +Y + SAR +F ++ WN +I A
Sbjct: 626 LNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVFKFHSISNLCTWNCMISA 685
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ +A LF++L Q KP+ FT + AC+ L + VHG G ++
Sbjct: 686 LSHNKESREALELFRHL---QFKPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQN 742
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S S+ALV YS +D A+KVF + NSMI+ + + G +K+++LF M
Sbjct: 743 SFISAALVDLYSTCGRLDNAVKVFRHSQKSESAW-NSMIAAYGNHGNGEKAIELFHEMCD 801
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIH-------GFCLKSSFDSYDYVSSVLVSMYA 251
LG + T V L+S L V QG+ + +K + YV V+M A
Sbjct: 802 LGIKVTKSTFVSLLSACSHSGL--VNQGLQYYECMLEKYGIKPEAEHQVYV----VNMLA 855
Query: 252 RCNCMNSAYH 261
R ++ AY
Sbjct: 856 RSGRIDEAYQ 865
>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 736
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/564 (28%), Positives = 289/564 (51%), Gaps = 39/564 (6%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALN--NVLPSARILFDKTPQR--SVFLWNSIIRA 78
K++H+L+ K+ L F +KL+ AL+ L A LF + ++F+WN++IRA
Sbjct: 42 KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWNTLIRA 101
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG-- 136
++L + LF +L + L P++ T+ + ++C+++ + +H A+ L
Sbjct: 102 HSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLALHLH 161
Query: 137 -----------------------------RDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
RD+++ +AL+T Y +D+A ++FD +
Sbjct: 162 PHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDEIPA 221
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
D+V N+MI+G+ G ++++L F M +P++ T+V ++S L +G+ I
Sbjct: 222 KDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLELGKWI 281
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
+ F + + LV MY++C + +A +F+ + D++ W+ +I GY Y
Sbjct: 282 GSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCHLSLY 341
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH----GFELSVMV 343
+AL F + + + V +VL A A + G +H Y+ ++ G +V +
Sbjct: 342 EEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVNNVSL 401
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
++++ MY+KCG + + QVF +M R++ ++N++I GL ++G +A F ++I +G
Sbjct: 402 WTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMINEGF 461
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
PD+ TF +L AC G V G F+ M ++YGI K +HY M+ LL +G +EA
Sbjct: 462 QPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKFDEAK 521
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDG 523
+ ++ D A+ G+LL+ C I+G + E VA +LFE +P V+LSN YA G
Sbjct: 522 VLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIYAGAG 581
Query: 524 RWDDVMKLRDDIVDNGLRKEAGVS 547
RWDDV K+R + D G++K G +
Sbjct: 582 RWDDVAKIRTKLNDKGMKKVPGCT 605
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 156/344 (45%), Gaps = 35/344 (10%)
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVT--AYSKLSLIDEAIKVFDGV--SDPDLVLCN 174
D+P L+ +H I SGL S L+ A S + A+ +F + P++ + N
Sbjct: 37 DIPSLKQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSYALSLFHSIHHQPPNIFIWN 96
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
++I + SL LF ML G P+ +T L + + +H LK
Sbjct: 97 TLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKL 156
Query: 235 SFDSYDYVSSVLVSMYARCNCM-------------------------------NSAYHVF 263
+ + +V + L+ MY++ + + A +F
Sbjct: 157 ALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLF 216
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + D+V+W+A+I GY Q G + +AL F ++ + + SVL+A ++
Sbjct: 217 DEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLE 276
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G I +V GF ++ + +ALVDMYSKCG +G ++F+ M ++++I +N++I G
Sbjct: 277 LGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYC 336
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+A F ++ + + P++ TF A+L AC G ++ G+
Sbjct: 337 HLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGK 380
>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
Length = 673
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/527 (29%), Positives = 274/527 (51%), Gaps = 33/527 (6%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
P A +F + + +WN+++R YAL+ A L+ ++ L P+++T+ + ++
Sbjct: 16 FPYAISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKS 75
Query: 114 CSENSDLPGLRFVHGGAIVSGLG-------------------------------RDSITS 142
C+++ + +HG + G RD ++
Sbjct: 76 CAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSY 135
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+T Y+ I A ++FD + D+V N+MISG+A G + ++L+LF M++
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PDE T+V ++S + + +G+ +H + F S + + L+ +Y++C + +A +
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F L D+V+W+ LI GY+ Y +AL F+++ G+ + V I S+L A A +
Sbjct: 256 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315
Query: 323 WPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G IH Y+ + +++ S ++L+DMY+KCG + QVF +M +++ ++N++I
Sbjct: 316 DIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +HG F+ F + + G+ PD+ TF LL AC H G ++ GR IF MT++Y I
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDIT 435
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
K EHY M+ LLG +G +EA I ++P D + +LL C +GN +LAE A
Sbjct: 436 PKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARN 495
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
L + +P V+LSN YA G WD+V K+R + G++K G S
Sbjct: 496 LMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCS 542
>gi|356528513|ref|XP_003532847.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 651
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 164/544 (30%), Positives = 282/544 (51%), Gaps = 2/544 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ L ++ +HA V K+ + F T V +Y L A +F + P R
Sbjct: 58 FVLKACAKLSHLRNSQIIHAHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVR 117
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN+++ +A + + L +++ + ++PD T + + L L V+
Sbjct: 118 DIASWNAMLLGFAQSGFLDRLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVY 177
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD--PDLVLCNSMISGFAHCGF 185
I G+ D ++ L+ AYSK + A +FD ++ +V NSMI+ +A+
Sbjct: 178 SFGIRIGVHMDVSVANTLIAAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEK 237
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
K++ + ML G +PD T++ L+S +P L G +H +K DS V +
Sbjct: 238 HVKAVNCYKGMLDGGFSPDISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNT 297
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MY++C ++SA +FN + V+W+ +I+ Y+++G +A+ F + G+K D
Sbjct: 298 LICMYSKCGDVHSARFLFNGMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPD 357
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V + ++++ ++ + G I Y I +G + +V+V +AL+DMY+KCG ++F
Sbjct: 358 LVTVLALISGCGQTGALELGKWIDNYSINNGLKDNVVVCNALIDMYAKCGGFNDAKELFY 417
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
TM+ R ++++ ++I L+G A E F ++E G+ P+ TF A+L AC HGGLV
Sbjct: 418 TMANRTVVSWTTMITACALNGDVKDALELFFMMLEMGMKPNHITFLAVLQACAHGGLVER 477
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G E F MT++YGI +HY MV LLG G+L EA I S+P D + ALLS C
Sbjct: 478 GLECFNMMTQKYGINPGIDHYSCMVDLLGRKGHLREALEIIKSMPFEPDSGIWSALLSAC 537
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++G ++ + V+ QLFE +P+ V ++N YA W+ V +R ++ +RK G
Sbjct: 538 KLHGKMEMGKYVSEQLFELEPQVAVPYVEMANIYASAEMWEGVAAIRRNMKYLQVRKSPG 597
Query: 546 VSWV 549
S +
Sbjct: 598 QSII 601
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 174/364 (47%), Gaps = 2/364 (0%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
++F WNS R +A LF+ + ++ + P+N T+ + +AC++ S L + +H
Sbjct: 17 TLFTWNSNFRHLVNQGHAQNALILFRQMKQSGITPNNSTFPFVLKACAKLSHLRNSQIIH 76
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ S + +A V Y K +++A VF + D+ N+M+ GFA GF D
Sbjct: 77 AHVLKSCFQSNIFVQTATVDMYVKCGRLEDAHNVFVEMPVRDIASWNAMLLGFAQSGFLD 136
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ L M G PD T++ LI + L+ ++ F ++ V++ L+
Sbjct: 137 RLSCLLRHMRLSGIRPDAVTVLLLIDSILRVKSLTSLGAVYSFGIRIGVHMDVSVANTLI 196
Query: 248 SMYARCNCMNSAYHVFNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
+ Y++C + SA +F+ + +V+W+++I Y+ + KA+ ++ + G D
Sbjct: 197 AAYSKCGNLCSAETLFDEINSGLRSVVSWNSMIAAYANFEKHVKAVNCYKGMLDGGFSPD 256
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
I ++L++ + ++ G ++H + ++ G + V V + L+ MYSKCG + +F
Sbjct: 257 ISTILNLLSSCMQPKALFHGLLVHSHGVKLGCDSDVCVVNTLICMYSKCGDVHSARFLFN 316
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
MS++ +++ +I G+ +A F + G PD T AL+ C G +
Sbjct: 317 GMSDKTCVSWTVMISAYAEKGYMSEAMTLFNAMEAAGEKPDLVTVLALISGCGQTGALEL 376
Query: 426 GREI 429
G+ I
Sbjct: 377 GKWI 380
>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
Length = 710
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/577 (28%), Positives = 294/577 (50%), Gaps = 36/577 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQ 66
L L + ++L + +HA + K L + ++L+ L+ + LP A +F+ +
Sbjct: 6 LSLLHNCKTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQE 65
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
++ +WN++ R +AL+ A L+ ++ L P+++T+ + ++C++ + +
Sbjct: 66 PNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQI 125
Query: 127 HGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLI 155
HG + G RD ++ +AL+T Y+ I
Sbjct: 126 HGHVLKLGYELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYI 185
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+ A K+FD + D+V N++ISG+A G ++L LF M++ PDE T+V ++S
Sbjct: 186 ESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVKPDESTMVTVVSAC 245
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ + +G+ +H + S + + L+ +Y++C + +A +F L + D+++W+
Sbjct: 246 AQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWN 305
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I GY+ Y +AL F+++ G+ + V + S+L A A+ + G IH Y+ +
Sbjct: 306 TMIGGYTHLNLYKEALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKR 365
Query: 336 --GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
G + + ++L+DMY+KCG + QVF +M R + N++I G +HG AF+
Sbjct: 366 IKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFD 425
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F + + G+ PD+ TF LL AC H G+++ GR IF MT+ Y I K EHY M+ LL
Sbjct: 426 IFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLL 485
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G G +EA I ++ D + +LL C ++GN +L E A +L + +P V
Sbjct: 486 GHLGLFKEAEEMINTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYV 545
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+LSN YA GRW++V +R + D G++K G S +
Sbjct: 546 LLSNIYATAGRWNEVANIRALLNDKGMKKVPGCSSIE 582
>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 938
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 171/550 (31%), Positives = 283/550 (51%), Gaps = 4/550 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L + S L K +H L K L + L+ +Y+ A ++F + P+R
Sbjct: 266 ILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDAGRSKDAELIFRRMPER 325
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WNS++ Y R A +F +L + + + T+ AC + + +H
Sbjct: 326 DLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSALAACLDPEFFTNGKILH 385
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G +V GL + I + L+T Y K + EA KVF + D V N++I GFA+ +
Sbjct: 386 GFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVTWNALIGGFANNAELN 445
Query: 188 KSLQLFDWMLRLGKTP--DEYTLVGLI-SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+++ F ++R G T D T+V ++ S L L+ G IH + + FD +V S
Sbjct: 446 EAVAAFK-LMREGSTSGVDYITIVNILGSCLTHEDLIKYGIPIHAHTVVTGFDLDQHVQS 504
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L++MYA+C ++S+ ++F+ L W+A+I ++ G +AL ++ G +
Sbjct: 505 SLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGEEALKLVVRMRSAGIEF 564
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D ++ L+ AA A + G +HG I+ GFEL + +A +DMY KCG L +++
Sbjct: 565 DQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHFIINAAMDMYGKCGELDDALRIL 624
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
++R+ +++N++I HG ++A E F D+++ G+ P+ +F LL AC HGGLV+
Sbjct: 625 PQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLGVKPNHVSFVCLLSACSHGGLVD 684
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+G + MT YGIQ EH + M+ LLG +G L EA +FI +P P + V +LL+
Sbjct: 685 EGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEAEAFITEMPIPPNDLVWRSLLAS 744
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C IY N DL A L E DP + V+ SN +A GRW+DV +R + + ++K+
Sbjct: 745 CRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATIGRWEDVEDVRGQMGAHKIQKKP 804
Query: 545 GVSWVSGSSN 554
SWV N
Sbjct: 805 AHSWVKWKGN 814
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 198/429 (46%), Gaps = 2/429 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + LV +KS + H K L+ D F T V YA ++ +A+ +F+
Sbjct: 59 FMIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFN 118
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P R+V W S++ +Y+ + + +K + + + A + +C D+
Sbjct: 119 EMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIIL 178
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ G A+ GL +++L+ + I+EA +F+ +++ D + NS+IS A
Sbjct: 179 GHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQ 238
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++S + F WM + + + TL L+S L G+G+HG +K +S +
Sbjct: 239 NTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICL 298
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+S+Y+ A +F + DL++W++++ Y Q G AL F ++ K
Sbjct: 299 CNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKK 358
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ + V S LAA G ++HG+V+ G + +++ + L+ Y KC + +
Sbjct: 359 EINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKK 418
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP-DESTFSALLCAC-CHG 420
VF+ M + + +T+N++I G + +A F+ + E + D T +L +C H
Sbjct: 419 VFQRMPKLDKVTWNALIGGFANNAELNEAVAAFKLMREGSTSGVDYITIVNILGSCLTHE 478
Query: 421 GLVNDGREI 429
L+ G I
Sbjct: 479 DLIKYGIPI 487
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/444 (22%), Positives = 206/444 (46%), Gaps = 7/444 (1%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
A+++FD+ +R+ WN ++ Y + +A F+++ +KP F A + AC++
Sbjct: 11 AQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNK 70
Query: 117 NSDL--PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCN 174
+S + G +F HG AI GL D ++ V Y+ ++ A K+F+ + D ++V
Sbjct: 71 SSIMAKEGFQF-HGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPDRNVVSWT 129
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
S++ ++ G + + + M G +E + +IS + +G + G LK
Sbjct: 130 SLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKF 189
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
++ ++ L+ M+ C +N A +FN + D ++W+++I+ +Q + ++ YF
Sbjct: 190 GLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYF 249
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
+ + ++ + ++ +L+ + G +HG +++G E ++ + + L+ +YS
Sbjct: 250 HWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDA 309
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G +F M ER++I++NS++ G A + F +++ + TF++ L
Sbjct: 310 GRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSAL 369
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC +G+ I G+Q + ++ G + EA +PK +D
Sbjct: 370 AACLDPEFFTNGK-ILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPK-LD 427
Query: 475 PAVSGALLSCCHIYGNSDLAEIVA 498
AL+ N++L E VA
Sbjct: 428 KVTWNALIG--GFANNAELNEAVA 449
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 139/273 (50%), Gaps = 7/273 (2%)
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
YSK I+ A VFD +S+ + N M+SG+ G + +++ F + +G P + +
Sbjct: 2 YSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMI 61
Query: 209 VGLISGLWEPSLLSV-GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
L++ + S+++ G HGF +K +V + V YA +++A +FN +
Sbjct: 62 ASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMP 121
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
++V+W++L+ YS G + + ++++ +G + IA V+++ ++ G
Sbjct: 122 DRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQ 181
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG---L 384
+ G+ ++ G E V +++L+ M+ CG + +F M+ER+ I++NS+I L
Sbjct: 182 LLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTL 241
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
H +++ F + R + E+ + +T S LL C
Sbjct: 242 HEESFRYFHWMRLVHEE---INYTTLSILLSIC 271
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 113/220 (51%), Gaps = 8/220 (3%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++ +N A VF+ + + +W+ +++GY + G Y +A+ +FR + G K +
Sbjct: 1 MYSKFGRINYAQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFM 60
Query: 309 IASVLAAAAKSANVWP-GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
IAS++ A KS+ + G HG+ I+ G V V ++ V Y+ G + ++F M
Sbjct: 61 IASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEM 120
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND-- 425
+RN++++ S+++ +G + ++ + +G+ +E+ + ++ +C G + D
Sbjct: 121 PDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSC---GFLMDII 177
Query: 426 -GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
G ++ ++G++ K ++ + G G++ EA S
Sbjct: 178 LGHQLLGHAL-KFGLETKVSAANSLIFMFGGCGDINEACS 216
>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g11460-like [Vitis vinifera]
Length = 629
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 260/487 (53%), Gaps = 2/487 (0%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
Q + WN+ +R A F +A +L+ +L + P+ FT+ ++C+ S
Sbjct: 18 QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLC-NSMISGFAHC 183
+HG I +G + ++L++ Y K S I A KVFD +L +C N++I+G++
Sbjct: 78 LHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLN 137
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+ ++ LF M + G + + T++GLI P L G +H ++ D V
Sbjct: 138 SRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVG 197
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L++MY RC ++ A +F+ + L+TW+A+I+GY+Q G G L +RK+ G
Sbjct: 198 NCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIV 257
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
DPV + VL++ A G + + GF + + +AL++MY++CG L +
Sbjct: 258 PDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARAI 317
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ M+E+N+I++ ++I G G+HG A + F ++I PD + F ++L AC H GL
Sbjct: 318 FDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGLT 377
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
G FT M +YG+Q EHY +V LLG AG LEEA I S+ D AV GALL
Sbjct: 378 EKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLG 437
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+ N +LAE+ ++ E +P Y V+LSN ++E G + ++++R + + L+KE
Sbjct: 438 ACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRERKLKKE 497
Query: 544 AGVSWVS 550
G S+V
Sbjct: 498 PGCSYVE 504
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 179/385 (46%), Gaps = 12/385 (3%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT--PQRSVFLWNSIIRAYAL 81
+LH V K +PF T L+ +Y + + SAR +FD+ + +N++I Y+L
Sbjct: 77 QLHGHVIKTGCEPEPFVQTSLISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSL 136
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
RF+DA LF+ + + + + T + C+ L +H ++ GL D
Sbjct: 137 NSRFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSV 196
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ L+T Y + +D A K+FDG+ + L+ N+MISG+A G L L+ M G
Sbjct: 197 GNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGI 256
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD TLVG++S + G+ + S F ++ + L++MYARC + A
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARA 316
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+ + ++++W+A+I GY G A+ F ++ + D SVL+A + +
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGL 376
Query: 322 VWPG-----AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITY 375
G A+ Y +Q G E S +VD+ + G L ++ +MS E + +
Sbjct: 377 TEKGLYYFTAMERDYGLQPGPEH----YSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVW 432
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIE 400
+++ +H A F +IE
Sbjct: 433 GALLGACKIHRNVELAELAFEKVIE 457
>gi|147805932|emb|CAN74403.1| hypothetical protein VITISV_043633 [Vitis vinifera]
Length = 841
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 274/537 (51%), Gaps = 28/537 (5%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL K++H L K + D + L+ +Y+ N L S+ LF+ P R LWNS+I
Sbjct: 277 SLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNRDAPLWNSMIS 336
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLG 136
AYA +A LF + +K D T + C E S L + +H I SG+
Sbjct: 337 AYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMCEELASGLLKGKSLHAHVIKSGMR 396
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ +AL++ Y++L+ ++ K+FD + D++ N+MI A ++ +LF+ M
Sbjct: 397 IDASLGNALLSMYTELNCVESVQKIFDRMKGVDIISWNTMILALARNTLRAQACELFERM 456
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
P+ YT++ +++ + + L G+ IHG+ +K S + + + L MY C
Sbjct: 457 RESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVMKHSIEINQPLRTALADMYMNCGDE 516
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLA 314
+A +F DL++W+A+I KA+P V I +VL+
Sbjct: 517 ATARDLFEGCPDRDLISWNAMIX-----------------------KAEPNSVTIINVLS 553
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMSERNI 372
+ A + G +H YV + GF L + +S +A + MY++CG L +F+T+ +RNI
Sbjct: 554 SFTHLATLPQGQSLHAYVTRRGFSLGLDLSLANAFITMYARCGSLQSAENIFKTLPKRNI 613
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
I++N++I G G++G A F ++E G P+ TF ++L AC H G + G ++F
Sbjct: 614 ISWNAMIAGYGMNGRGSDAMLAFSQMLEDGFRPNGVTFVSVLSACSHSGFIEMGLQLFHS 673
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
M +++ + + HY +V LL G ++EA FI S+P D +V ALLS C Y ++
Sbjct: 674 MVQDFNVTPELVHYSCIVDLLARGGCIDEAREFIDSMPIEPDASVWRALLSSCRAYSDAK 733
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A+ + +L + +P V+LSN YA G W +V ++R + + GLRK G+SW+
Sbjct: 734 QAKTIFEKLDKLEPMNAGNYVLLSNVYATAGLWLEVRRIRTWLKEKGLRKPPGISWI 790
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/424 (26%), Positives = 213/424 (50%), Gaps = 3/424 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
LVL+ + ++ R K +H + L+ D T +V Y + AR +FD R
Sbjct: 65 LVLKACAAQNAVERGKSIHRSIQGTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDR 124
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V LWN+++ Y + +A L + + R L+P++ T + AC S+L R VH
Sbjct: 125 DVVLWNAMVYGYVGWGCYEEAMLLVREMGRENLRPNSRTMVALLLACEGASELRLGRGVH 184
Query: 128 GGAIVSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
G + +G+ + ++AL+ Y + + + +FD + ++V N+MISG+ G +
Sbjct: 185 GYCLRNGMFDSNPHVATALIGFYLRFDMRVLPL-LFDLMVVRNIVSWNAMISGYYDVGDY 243
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
K+L+LF ML D T++ + E L +G+ IH +K F Y+ + L
Sbjct: 244 FKALELFVQMLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNAL 303
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MY+ + S++ +F S+ + D W+++I+ Y+ G + +A+ F ++ +G K D
Sbjct: 304 LNMYSNNGSLESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDE 363
Query: 307 VLIASVLAAAAKSAN-VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ +L+ + A+ + G +H +VI+ G + + +AL+ MY++ + ++F+
Sbjct: 364 RTVVIMLSMCEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFD 423
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M +II++N++IL L + QA E F + E + P+ T ++L AC ++
Sbjct: 424 RMKGVDIISWNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDF 483
Query: 426 GREI 429
GR I
Sbjct: 484 GRSI 487
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 2/347 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WNS+I+ A S + + + P+N T + +AC+ + + + +H
Sbjct: 28 WNSVIKHQANLKNDQAILSAYTQMESLGVLPNNTTLPLVLKACAAQNAVERGKSIHRSIQ 87
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+ L D +A+V Y K +++A VFD +SD D+VL N+M+ G+ G +++++
Sbjct: 88 GTDLMDDVRVGTAVVDFYCKCGFVEDARCVFDAMSDRDVVLWNAMVYGYVGWGCYEEAML 147
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS-FDSYDYVSSVLVSMY 250
L M R P+ T+V L+ S L +G+G+HG+CL++ FDS +V++ L+ Y
Sbjct: 148 LVREMGRENLRPNSRTMVALLLACEGASELRLGRGVHGYCLRNGMFDSNPHVATALIGFY 207
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
R + M +F+ + ++V+W+A+I+GY GDY KAL F ++ + K D V +
Sbjct: 208 LRFD-MRVLPLLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQMLVDEVKFDCVTML 266
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+ A A+ ++ G IH I+ F + + +AL++MYS G L Q+FE++ R
Sbjct: 267 VAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGSLESSHQLFESVPNR 326
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ +NS+I G +A + F + +G+ DE T +L C
Sbjct: 327 DAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSMC 373
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 6/346 (1%)
Query: 37 DPFYATKLVRLYALNN--VLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+P AT L+ Y + VLP +LFD R++ WN++I Y + A LF
Sbjct: 196 NPHVATALIGFYLRFDMRVLP---LLFDLMVVRNIVSWNAMISGYYDVGDYFKALELFVQ 252
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+L ++K D T +AC+E L + +H AI D +AL+ YS
Sbjct: 253 MLVDEVKFDCVTMLVAVQACAELGSLKLGKQIHQLAIKFEFVEDLYILNALLNMYSNNGS 312
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
++ + ++F+ V + D L NSMIS +A G ++++ LF M G DE T+V ++S
Sbjct: 313 LESSHQLFESVPNRDAPLWNSMISAYAAFGCHEEAMDLFIRMQSEGVKKDERTVVIMLSM 372
Query: 215 LWE-PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
E S L G+ +H +KS + + L+SMY NC+ S +F+ + D+++
Sbjct: 373 CEELASGLLKGKSLHAHVIKSGMRIDASLGNALLSMYTELNCVESVQKIFDRMKGVDIIS 432
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+ +I ++ +A F ++ K + I S+LAA + G IHGYV+
Sbjct: 433 WNTMILALARNTLRAQACELFERMRESEIKPNSYTIISILAACEDVTCLDFGRSIHGYVM 492
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+H E++ + +AL DMY CG +FE +R++I++N++I
Sbjct: 493 KHSIEINQPLRTALADMYMNCGDEATARDLFEGCPDRDLISWNAMI 538
>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
Length = 903
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 161/540 (29%), Positives = 278/540 (51%), Gaps = 12/540 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++ + + +H +V ++ L + +T L YA L A+ +FD+ +R V WN+++
Sbjct: 240 TIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLG 299
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AYA ++A LF +L + P T + CS L R +HG A+ GL R
Sbjct: 300 AYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCS---SLRFGRMIHGCALEKGLDR 356
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + +AL+ Y++ +EA +F + + V N+MI+G + G ++++LF M
Sbjct: 357 DIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTMIAGSSQKGQMKRAVELFQRMQ 415
Query: 198 RLGKTPDEYTLVGLISGL----WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
G P T + L+ + E ++ G+ +H + + S + + +V MYA C
Sbjct: 416 LEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASC 475
Query: 254 NCMNSAYHVFNSLF---HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
++ A F D+V+W+A+I+ SQ G +AL +FR++++ G + +
Sbjct: 476 GAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCV 535
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-E 369
+VL A A +A + G ++H ++ G E ++ V++AL MY +CG L ++FE ++ E
Sbjct: 536 AVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVE 595
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
R+++ +N++I +G +A + F + ++G PDE +F ++L AC HGGL ++G EI
Sbjct: 596 RDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEI 655
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M + YGI +HY V +LG AG L +A I + V LL C Y
Sbjct: 656 FRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYR 715
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ D + + E DP + V+LSN A G+WD+ ++R ++ GLRKEAG SW+
Sbjct: 716 DVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKWDEAAEVRTEMESRGLRKEAGKSWI 775
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 212/448 (47%), Gaps = 15/448 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
LS+ + +HA + SL + L+RLY L +F + R W +II A
Sbjct: 45 LSQGRRIHARIV--SLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRDEASWTTIITA 102
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + A +F + + ++ D T+ + +AC+ DL R +H + SGL
Sbjct: 103 YTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGK 162
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+ ++ L+ Y + A+ +F+ + + DLV N+ I+ A G +L+LF M
Sbjct: 163 SVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGIALELFQRMQL 221
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G P TLV L + + Q IH +S + VS+ L S YAR +
Sbjct: 222 EGVRPARITLV---IALTVCATIRQAQAIHFIVRESGLEQTLVVSTALASAYARLGHLYQ 278
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ D+V+W+A++ Y+Q G +A F ++ +G V +++ A+
Sbjct: 279 AKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKV---TLVNASTG 335
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+++ G +IHG ++ G + +++ +AL+DMY++CG +F+ + N +++N++
Sbjct: 336 CSSLRFGRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEARHLFKRIP-CNAVSWNTM 394
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC----HGGLVNDGREIFTRMT 434
I G G +A E F+ + +G+ P +T+ LL A + +GR++ +R+
Sbjct: 395 IAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHSRIV 454
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
G ++ +VK+ G ++EA
Sbjct: 455 -SCGYASEPAIGTAVVKMYASCGAIDEA 481
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 151/301 (50%), Gaps = 6/301 (1%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ RA ++ L R +H A + LG + + L+ Y K + + +VF + D
Sbjct: 35 LLRAAGDDRLLSQGRRIH--ARIVSLGLEEELGNHLLRLYLKCESLGDVEEVFSRLEVRD 92
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
++I+ + G +++ +F M + G D T + ++ LS G+ IH
Sbjct: 93 EASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHA 152
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+ ++S ++++L+ +Y C C+ SA +F + DLV+W+A I +Q GD G
Sbjct: 153 WIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGDLGI 211
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
AL F+++ ++G + P I V+A A + IH V + G E +++VS+AL
Sbjct: 212 ALELFQRMQLEGVR--PARITLVIALTV-CATIRQAQAIHFIVRESGLEQTLVVSTALAS 268
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
Y++ G+L +VF+ +ER+++++N+++ HG +A F ++ +G++P + T
Sbjct: 269 AYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVT 328
Query: 410 F 410
Sbjct: 329 L 329
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 106/210 (50%), Gaps = 3/210 (1%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
LV L+ + LLS G+ IH + S + + + L+ +Y +C + VF+ L
Sbjct: 32 LVRLLRAAGDDRLLSQGRRIHARIV--SLGLEEELGNHLLRLYLKCESLGDVEEVFSRLE 89
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
D +W+ +IT Y++ G +A+ F ++ +G + D V +VL A A+ ++ G
Sbjct: 90 VRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRS 149
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IH ++++ G + ++++ L+ +Y CG + + +FE M ER+++++N+ I G
Sbjct: 150 IHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKM-ERDLVSWNAAIAANAQSGD 208
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
A E F+ + +G+ P T L C
Sbjct: 209 LGIALELFQRMQLEGVRPARITLVIALTVC 238
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 144/333 (43%), Gaps = 24/333 (7%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
+ NL V + ++++ ++LH+ + +P T +V++YA + A F
Sbjct: 426 YLNLLEAVASNPEEARAMAEGRKLHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASF 485
Query: 62 DK---TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
+ + V WN+II + + A F+ + + P+ T + AC+ +
Sbjct: 486 QRGAMEDRHDVVSWNAIISSLSQHGHGKRALGFFRRMDLHGVAPNQITCVAVLDACAGAA 545
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMI 177
L VH SG+ + ++AL + Y + ++ A ++F+ V+ + D+V+ N+MI
Sbjct: 546 ALTEGEIVHDHLRHSGMESNLFVATALASMYGRCGSLESAREIFEKVAVERDVVIFNAMI 605
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCL 232
+ ++ G ++L+LF M + G PDE + V ++S L G I + +
Sbjct: 606 AAYSQNGLAGEALKLFWRMQQEGSRPDEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGI 665
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKAL 291
S D Y + V + R + A + + P ++ W L+ + D +
Sbjct: 666 APSEDHY----ACAVDVLGRAGWLADAEELIRCMDVKPTVLVWKTLLGACRKYRDVDRG- 720
Query: 292 YYFRKLNMQGKKADP------VLIASVLAAAAK 318
R N ++ DP V+++++LA A K
Sbjct: 721 ---RLANSMVRELDPGDESAYVVLSNILAGAGK 750
>gi|224104375|ref|XP_002313416.1| predicted protein [Populus trichocarpa]
gi|222849824|gb|EEE87371.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 157/462 (33%), Positives = 256/462 (55%), Gaps = 6/462 (1%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
LL + P TY + +C+ + L + VH + +G +D ++ L+ YS
Sbjct: 61 LLSLEPNPAQHTYELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDS 120
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT----LVG 210
ID A KVFD + + + N++ + G ++ L ++ M +G D +T L
Sbjct: 121 IDNARKVFDKTRNRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKA 180
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++ SLL+ G+ IH L+ +D Y ++ + LV MYA+ C+++A VFN + +
Sbjct: 181 CVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKN 240
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVI 328
+V+WSA+I Y++ G +AL FR+L ++ + P V + SVL A A A + G +I
Sbjct: 241 VVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLI 300
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
HGY+++ G + + V SALV MY++CG L LG +VF+ M +R+++++NS+I G+HGF
Sbjct: 301 HGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFG 360
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
+A F ++ G+ P +F ++L AC H GLV++G+ +F M +GI EHY
Sbjct: 361 KKAIGIFEEMTYNGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYAC 420
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
MV LLG A LEEA I ++ P V G+LL C I+ N +LAE + +LF+ +P
Sbjct: 421 MVDLLGRANRLEEAAKIIENMRIEPGPKVWGSLLGSCRIHCNVELAERASIRLFDLEPTN 480
Query: 509 GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L++ YAE G WD V +++ + GL+K G SW+
Sbjct: 481 AGNYVLLADIYAEAGMWDGVKRVKKLLEARGLQKVPGRSWIE 522
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/369 (28%), Positives = 188/369 (50%), Gaps = 8/369 (2%)
Query: 7 FLVLELSKSHQ-SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+ +L LS +HQ SL + +H + + +DPF ATKL+ +Y+ + + +AR +FDKT
Sbjct: 73 YELLILSCTHQNSLLDAQRVHRHLLENGFDQDPFLATKLINMYSFFDSIDNARKVFDKTR 132
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-- 123
R+++++N++ RA +LA + ++++ + + D FTY + +AC + L
Sbjct: 133 NRTIYVYNALFRALSLAGHGEEVLNMYRRMNSIGIPSDRFTYTYVLKACVASECFVSLLN 192
Query: 124 --RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
R +H + G + LV Y+K + A VF+ + ++V ++MI+ +A
Sbjct: 193 KGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVFNQMPVKNVVSWSAMIACYA 252
Query: 182 HCGFWDKSLQLF-DWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
G ++L+LF + ML P+ T+V ++ + L G+ IHG+ L+ DS
Sbjct: 253 KNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAALEQGRLIHGYILRKGLDSI 312
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
V S LV+MYARC + VF+ + D+V+W++LI+ Y G KA+ F ++
Sbjct: 313 LPVISALVTMYARCGKLELGQRVFDQMDKRDVVSWNSLISSYGVHGFGKKAIGIFEEMTY 372
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLG 358
G + P+ SVL A + + V G ++ + + HG SV + +VD+ + L
Sbjct: 373 NGVEPSPISFVSVLGACSHAGLVDEGKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLE 432
Query: 359 LGIQVFETM 367
++ E M
Sbjct: 433 EAAKIIENM 441
>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
Length = 1309
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/433 (33%), Positives = 238/433 (54%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
++L +R VH A V G+ ++ I ++ LV YS +D+A +FDG+ D V + M+
Sbjct: 749 TNLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 808
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
GFA G + F ++R G PD YTL +I + L +G+ IH K D
Sbjct: 809 GGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 868
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+V + LV MY +C + A +F+ + DLVTW+ +I GY++ G+ ++L F K+
Sbjct: 869 LDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKM 928
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+G D V + +V+ A AK + I Y+ + F+L V++ +A++DM++KCG +
Sbjct: 929 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCV 988
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++F+ M E+N+I+++++I G HG +A + F ++ G+ P++ T +LL AC
Sbjct: 989 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYAC 1048
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H GLV +G F+ M E+Y ++ +HY +V LLG AG L+EA I S+ D +
Sbjct: 1049 SHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGL 1108
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
GA L C + + LAE A L E P+ + ++LSN YA GRW+DV K+RD +
Sbjct: 1109 WGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQ 1168
Query: 538 NGLRKEAGVSWVS 550
L+K G +W+
Sbjct: 1169 RRLKKIPGWTWIE 1181
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 236/432 (54%)
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
+L +R VH A V G+ + + ++ L+ YS +D+A +FDG+ D V + M+
Sbjct: 74 NLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 133
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
GFA G + F ++R G PD YTL +I + L +G+ IH K D
Sbjct: 134 GFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 193
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+V + LV MY +C + A +F+ + DLVTW+ +I GY++ G ++L F K+
Sbjct: 194 DHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKMR 253
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+G D V + +V+ A AK + +I Y+ + F+L V++ +A++DMY+KCG +
Sbjct: 254 EEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCVE 313
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
++F+ M E+N+I+++++I G HG +A + F ++ G+ PD+ T ++LL AC
Sbjct: 314 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACS 373
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H GLV +G F+ M E+Y ++ +HY +V LLG AG L+EA I S+ D +
Sbjct: 374 HAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMTIEKDEGLW 433
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
GA L C + + LAE A L E + + V+LSN YA GRW+DV K+RD +
Sbjct: 434 GAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQR 493
Query: 539 GLRKEAGVSWVS 550
L+K G +W+
Sbjct: 494 RLKKTPGWTWIE 505
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 171/353 (48%), Gaps = 1/353 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L++ +++HA + +L + A KL+ Y+ L A LFD R W+ ++
Sbjct: 73 RNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDSVSWSVMV 132
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+A + + F+ L+R +PDN+T + RAC + +L R +H GL
Sbjct: 133 GGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLD 192
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +ALV Y K I++A +FD + + DLV MI G+A CG ++SL LF+ M
Sbjct: 193 LDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVLFEKM 252
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G PD+ +V ++ + + + I + + F + + ++ MYA+C C+
Sbjct: 253 REEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAKCGCV 312
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
SA +F+ + ++++WSA+I Y G KAL F + G D + +AS+L A
Sbjct: 313 ESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYAC 372
Query: 317 AKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ + V G + + + V + +VD+ + G L +++ ++M+
Sbjct: 373 SHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAGRLDEALKLIKSMT 425
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 168/352 (47%), Gaps = 1/352 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L++ +++H + +L++ A KLV Y+ L A LFD R W+ ++
Sbjct: 750 NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+A + + F+ L+R +PDN+T + RAC + +L R +H GL
Sbjct: 810 GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D +ALV Y K I++A +FD + + DLV MI G+A CG ++SL LFD M
Sbjct: 870 DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G PD+ +V ++ + + + I + + F + + ++ M+A+C C+
Sbjct: 930 EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 989
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
SA +F+ + ++++WSA+I Y G KAL F + G + + + S+L A +
Sbjct: 990 SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 1049
Query: 318 KSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ V G + + + V + +VD+ + G L +++ +M+
Sbjct: 1050 HAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMT 1101
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 139/324 (42%), Gaps = 14/324 (4%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
V+ + ++L + +H +V K L D F LV +Y + AR LFDK +R
Sbjct: 165 FVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQER 224
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W +I YA + N++ LF+ + + PD + AC++ + R +
Sbjct: 225 DLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIID 284
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
D I +A++ Y+K ++ A ++FD + + +++ ++MI+ + + G
Sbjct: 285 DYIQRKKFQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 344
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
K+L LF ML G PD+ TL L+ +GL E L + +++ Y
Sbjct: 345 KALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHY--- 401
Query: 243 SSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY---GKALYYFRKLN 298
+ +V + R ++ A + S+ D W A + D KA +L
Sbjct: 402 -TCVVDLLGRAGRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQ 460
Query: 299 MQGKKADPVLIASVLAAAAKSANV 322
Q VL++++ A A + +V
Sbjct: 461 SQN-PGHYVLLSNIYANAGRWEDV 483
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 122/285 (42%), Gaps = 10/285 (3%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
V+ + ++L + +H +V K L D F LV +Y + AR LFDK +R
Sbjct: 841 FVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMXER 900
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W +I YA N++ LF + + PD + AC++ + R +
Sbjct: 901 DLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTID 960
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
D I +A++ ++K ++ A ++FD + + +++ ++MI+ + + G
Sbjct: 961 DYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGR 1020
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
K+L LF MLR G P++ TLV L+ +GL E L + ++ Y
Sbjct: 1021 KALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHY--- 1077
Query: 243 SSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
+ +V + R ++ A + S+ D W A + D
Sbjct: 1078 -TCVVDLLGRAGRLDEALKLIXSMTXEKDEGLWGAFLGACRTHKD 1121
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
++A N+ +H HG +++V++ L+ YS L +F+ M R+
Sbjct: 66 ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMCVRDS 125
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++++ ++ G G F FR++I G PD T ++ AC
Sbjct: 126 VSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRAC 170
>gi|15241714|ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g39350
gi|10177683|dbj|BAB11009.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 273/534 (51%), Gaps = 4/534 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + ++ RD + L+ +Y + AR +FD R V WN++I Y
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
NDA +F ++ + D+ T + C DL R VH LG +A
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y K +DEA VFD + D++ MI+G+ G + +L+L M G P+
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T+ L+S + ++ G+ +HG+ ++ S + + L+SMYA+C ++ + VF+
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
WSA+I G Q AL F+++ + + + + S+L A A A++
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER----NIITYNSVIL 380
IH Y+ + GF S+ ++ LV +YSKCG L ++F + E+ +++ + ++I
Sbjct: 439 AMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G+HG + A + F +++ G+ P+E TF++ L AC H GLV +G +F M E Y
Sbjct: 499 GYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
A++ HY +V LLG AG L+EAY+ I ++P V GALL+ C + N L E+ A++
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANK 618
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
LFE +P V+L+N YA GRW D+ K+R + + GLRK+ G S + SN
Sbjct: 619 LFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRSN 672
Score = 202 bits (514), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 131/479 (27%), Positives = 235/479 (49%), Gaps = 7/479 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
QS+S+TK LH V + +T L YAL + AR LF++ PQ S+ +N +I
Sbjct: 29 QSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQSSLLSYNIVI 87
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLK--PDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
R Y ++DA S+F ++ +K PD +TY + +A E + VHG + S
Sbjct: 88 RMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSW 147
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
GRD +AL+ Y ++ A VFD + + D++ N+MISG+ G+ + +L +FD
Sbjct: 148 FGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
WM+ D T+V ++ L +G+ +H + V + LV+MY +C
Sbjct: 208 WMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCG 267
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
M+ A VF+ + D++TW+ +I GY++ GD AL R + +G + + V IAS+++
Sbjct: 268 RMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
+ V G +HG+ ++ +++ ++L+ MY+KC + L +VF S+ +
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++++I G + A F+ + + + P+ +T ++LL A + I +T
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLT 447
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF---IWSLPKPVDPAVSGALLSCCHIYGN 490
+ G + + +V + G LE A+ I K D + GAL+S ++G+
Sbjct: 448 KT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
Length = 1027
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 277/535 (51%), Gaps = 3/535 (0%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
HQ R +H LV K L+R+YA A ++F + P + + WNS+
Sbjct: 366 HQKWGRG--IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 423
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ ++ R DA L +++ + + T+ AC R +HG +VSGL
Sbjct: 424 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 483
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+ I +ALV+ Y K+ + E+ +V + D+V N++I G+A DK+L F
Sbjct: 484 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 543
Query: 196 MLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G + + T+V ++S P LL G+ +H + + + F+S ++V + L++MYA+C
Sbjct: 544 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 603
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++S+ +FN L + +++TW+A++ + G + L K+ G D + L+
Sbjct: 604 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 663
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
AAAK A + G +HG ++ GFE + +A DMYSKCG +G +++ R++ +
Sbjct: 664 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 723
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N +I LG HG+ + F +++E G+ P TF +LL AC HGGLV+ G + +
Sbjct: 724 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 783
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++G++ EH I ++ LLG +G L EA +FI +P + V +LL+ C I+GN D
Sbjct: 784 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 843
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A L + +P + V+ SN +A GRW+DV +R + ++K+ SWV
Sbjct: 844 RKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 898
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 181/376 (48%), Gaps = 5/376 (1%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
A +FD+ +R WNSI AYA ++ +F + R + ++ T + +
Sbjct: 304 ANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGH 363
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSI--TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCN 174
R +HG +V +G DS+ + L+ Y+ EA VF + DL+ N
Sbjct: 364 VDHQKWGRGIHG--LVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWN 421
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
S+++ F + G +L L M+ GK+ + T ++ + P G+ +HG + S
Sbjct: 422 SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 481
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
+ + LVSMY + M+ + V + D+V W+ALI GY++ D KAL F
Sbjct: 482 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 541
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFELSVMVSSALVDMYSK 353
+ + ++G ++ + + SVL+A ++ G +H Y++ GFE V ++L+ MY+K
Sbjct: 542 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAK 601
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG L +F + RNIIT+N+++ HG + + + G++ D+ +FS
Sbjct: 602 CGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEG 661
Query: 414 LCACCHGGLVNDGREI 429
L A ++ +G+++
Sbjct: 662 LSAAAKLAVLEEGQQL 677
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 192/428 (44%), Gaps = 26/428 (6%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + LV +S ++H VAK+ LL D + +T ++ LY + ++ +R +F+
Sbjct: 174 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 233
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P R+V W S++ Y+ + ++K D
Sbjct: 234 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYK-------------------------DESL 268
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R + G + SGL ++L++ + +D A +FD +S+ D + NS+ + +A
Sbjct: 269 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 328
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++S ++F M R + T+ L+S L G+GIHG +K FDS V
Sbjct: 329 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 388
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+ MYA A VF + DL++W++L+ + G AL + GK
Sbjct: 389 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 448
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V S LAA G ++HG V+ G + ++ +ALV MY K G + +
Sbjct: 449 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 508
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGG 421
V M R+++ +N++I G +A F+ + +G++ + T ++L AC G
Sbjct: 509 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 568
Query: 422 LVNDGREI 429
L+ G+ +
Sbjct: 569 LLERGKPL 576
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 199/451 (44%), Gaps = 29/451 (6%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +HAL K + + L+ +Y + AR LFD P R+ WN+++
Sbjct: 92 RAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRV 151
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL--PGLRFVHGGAIVSGLGRDSI 140
+ + F+ + +KP +F A + AC + + G++ VHG SGL D
Sbjct: 152 GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVY 210
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
S+A++ Y L+ + KVF+ + D ++V S++ G++ G ++ + ++
Sbjct: 211 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY------- 263
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
DE S+G+ I G +KS +S V + L+SM ++ A
Sbjct: 264 --KDE----------------SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYAN 305
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
++F+ + D ++W+++ Y+Q G ++ F + + + ++++L+
Sbjct: 306 YIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVD 365
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G IHG V++ GF+ V V + L+ MY+ G VF+ M +++I++NS++
Sbjct: 366 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMA 425
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G + A +I G + + TF++ L AC GR I + G+
Sbjct: 426 SFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLF 484
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+V + G G + E+ + +P+
Sbjct: 485 YNQIIGNALVSMYGKIGEMSESRRVLLQMPR 515
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 37/211 (17%)
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H ++ LSV+ ++ L++MY+K G + +F+ M RN +++N+++ G+
Sbjct: 91 GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVR 150
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
G + EFFR + + G+ P ++L+ AC G +F + +G AK+
Sbjct: 151 VGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG------SMFREGVQVHGFVAKS- 203
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
G L + Y VS A+L H+YG L + ++FE
Sbjct: 204 ------------GLLSDVY-------------VSTAIL---HLYGVYGLVS-CSRKVFEE 234
Query: 505 DPRKGAYK-VMLSNTYAEDGRWDDVMKLRDD 534
P + L Y++ G ++V+ + D
Sbjct: 235 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKD 265
>gi|15221400|ref|NP_172104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174948|sp|Q9LND4.1|PPR14_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06140, mitochondrial; Flags: Precursor
gi|8810476|gb|AAF80137.1|AC024174_19 Contains similarity to a hypothetical protein F24K9.13 gi|6006885
from Arabidopsis thaliana gb|AC008153 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|332189825|gb|AEE27946.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 558
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 286/544 (52%), Gaps = 5/544 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP--Q 66
+L + ++L+ T+++HA V + + L Y +N L A F++ P +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 67 RSVFLWNSIIRAYALAHR--FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
R+ WN+I+ Y+ + ++D L+ + R D+F +AC L
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGI 129
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG A+ +GL +D + +LV Y++L ++ A KVFD + + VL ++ G+
Sbjct: 130 LIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYS 189
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-DSYDYVS 243
+ +LF M G D TL+ L+ VG+ +HG ++ SF D DY+
Sbjct: 190 KDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQ 249
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ ++ MY +C +++A +F + ++V W+ LI+G+++ +A FR++ +
Sbjct: 250 ASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESIL 309
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ +A++L + + ++ G +HGY+I++G E+ + ++ +DMY++CG + + V
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ M ERN+I+++S+I G++G +A + F + + + P+ TF +LL AC H G V
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNV 429
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+G + F MT +YG+ + EHY MV LLG AG + EA SFI ++P + GALLS
Sbjct: 430 KEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLS 489
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+ DLA +A +L +P K + V+LSN YA+ G W+ V +R + G RK
Sbjct: 490 ACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKH 549
Query: 544 AGVS 547
G S
Sbjct: 550 VGQS 553
>gi|449524410|ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 277/542 (51%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L +S + + T+ +H K L LV Y + + +F++T +++
Sbjct: 118 LLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKN 177
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNSII A R DA + F+ ++ +P++ T + I E + +HG
Sbjct: 178 EVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHG 237
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
++ G D +++L+ Y+K EA +F + ++V N+MI+ +A +
Sbjct: 238 FSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLE 297
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++ M G+ P+ T ++ L G+ IH ++ S +VS+ L+
Sbjct: 298 AIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLID 357
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C C++SA +VFN+ D V+++ LI GYS+ D ++L F ++ + GKK D V
Sbjct: 358 MYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVS 416
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
V++A A A + G +HG +++ + VS++L+D Y+KCG + + ++F +
Sbjct: 417 FVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQIL 476
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+++ ++N++ILG G+ G A F + + + D ++ A+L AC HGGLV G +
Sbjct: 477 FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQ 536
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F+ M + ++ HY MV LLG AG +EEA I LP D + GALL C IY
Sbjct: 537 YFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIY 595
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +L A LFE P+ Y ++LSN YAE GRWD+ K+R+ + G +K G SW
Sbjct: 596 GNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSW 655
Query: 549 VS 550
V
Sbjct: 656 VQ 657
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 211/424 (49%), Gaps = 4/424 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+L + + E+H +V K D + L+ LY L AR LFD+ P+R
Sbjct: 15 FVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPER 74
Query: 68 SVFLWNSIIRAYALAHRFNDAKSL-FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
V WN+II ++ + +A++ F +LR+ +KP+ + + + D R +
Sbjct: 75 DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRI 134
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG-F 185
H ++ GL T +ALV AY K + +VF+ + + V NS+I+G A G
Sbjct: 135 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRC 194
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
WD +L F M+ G P+ T+ ++ L E G+ IHGF ++ ++ ++++
Sbjct: 195 WD-ALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANS 253
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MYA+ A +F++L ++V+W+A+I Y+ +A+ + ++ G+ +
Sbjct: 254 LIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPN 313
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V +VL A A+ + PG IH ++ G + VS++L+DMY+KCG L VF
Sbjct: 314 AVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN 373
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
T S ++ ++YN +I+G Q+ F ++ G PD +F ++ AC + +
Sbjct: 374 T-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 432
Query: 426 GREI 429
G+E+
Sbjct: 433 GKEV 436
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 170/338 (50%), Gaps = 5/338 (1%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
++R ++ D+ T+ + + CS++ D+ VHG G D + L+ Y
Sbjct: 1 MVRRGVQLDDHTFPFVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGF 60
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGL-- 211
+++A ++FD + + D+V N++I + G + ++ + WM LR P+ +++ L
Sbjct: 61 LNDARRLFDEMPERDVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLP 120
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
IS E ++ + IH + +K DS + LV Y +C + + + VFN +
Sbjct: 121 ISAALEDEEMT--RRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNE 178
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
V+W+++I G + +G AL FR + G + + V I+S+L + G IHG+
Sbjct: 179 VSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGF 238
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
++ G E + ++++L+DMY+K G+ +F + RNI+++N++I L+ +A
Sbjct: 239 SMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEA 298
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
F + E G P+ TF+ +L AC G + G+EI
Sbjct: 299 IRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEI 336
>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 678
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/493 (31%), Positives = 257/493 (52%), Gaps = 1/493 (0%)
Query: 59 ILFDKTPQRS-VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
++F KTP S FL+N++IR RFN+A L+ ++ + + PD+FT++ + +AC+
Sbjct: 58 LVFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARL 117
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
+ +H +G D + +V YSK + +A KVFD + ++V MI
Sbjct: 118 NLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMI 177
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G G + +++ LF +L G PD + +V ++ L G+ I +
Sbjct: 178 CGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLS 237
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+V++ LV MY +C M A VF+ + D+V WSA+I GY+ G +A+ F ++
Sbjct: 238 RNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEM 297
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ D + L++ A + G G + F + ++ ++L+D Y+KCG +
Sbjct: 298 RKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSM 357
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ V++ M E++ + +N+VI GL ++G AF F + + G+ P+E TF LLC C
Sbjct: 358 EEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGC 417
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H GLV+DGR F M+ ++ + EHY MV LL AG L+EA++ I +P + V
Sbjct: 418 THAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIV 477
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
G+LL C ++ + LAE V QL E +P + V+LSN Y+ RWD+ K+R + +
Sbjct: 478 WGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNE 537
Query: 538 NGLRKEAGVSWVS 550
G++K G SWV
Sbjct: 538 KGMQKLPGYSWVE 550
Score = 149 bits (375), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 183/394 (46%), Gaps = 8/394 (2%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H+LV K D F T +V Y+ L A +FD ++V W +I +
Sbjct: 126 IHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTGMICGCIEFGK 185
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F +A LF+ LL + L+PD F + RAC+ DL R++ GL R+ +++
Sbjct: 186 FREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATS 245
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K ++EA VFDG+ + D+V ++MI G+A G ++++LF M ++ PD
Sbjct: 246 LVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFEMRKVNVRPD 305
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
Y +VG +S L +G G F S + + L+ YA+C M A V+
Sbjct: 306 CYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYK 365
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D V ++A+I+G + G G A F ++ G + +L + V
Sbjct: 366 MMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDD 425
Query: 325 GAVIHGY-VIQHGFELSVMVS--SALVDMYSKCGYLGLGIQVFETMSER-NIITYNSVIL 380
G H + + H F ++ + +VD+ ++ G+L + + M + N+I + S++
Sbjct: 426 GR--HYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLG 483
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G LH T A + +IE L P S LL
Sbjct: 484 GCRLHRETQLAEHVLKQLIE--LEPWNSGHYVLL 515
>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 773
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 135/395 (34%), Positives = 225/395 (56%)
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+D K+F+ + + DLV N++I+G A G + ++L + M PD +TL ++
Sbjct: 250 VDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPL 309
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ E +S G+ IHG ++ D+ YV+S L+ MYA+C + +Y VF L D ++W
Sbjct: 310 IAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISW 369
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+++I G Q G + + L +FR++ M K +S++ A A + G +HGY+ +
Sbjct: 370 NSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITR 429
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+GF+ ++ ++S+LVDMY+KCG + Q+F+ M R+++++ ++I+G LHG A E
Sbjct: 430 NGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIEL 489
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F + +G+ P+ F A+L AC H GLV++ + F MT ++GI EHY + LLG
Sbjct: 490 FEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLG 549
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG LEEAY FI +P +V LLS C ++ N D+AE VA+++ E DP+ ++
Sbjct: 550 RAGRLEEAYDFICGMPIGPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYIL 609
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L+N Y+ RW + K R + G+RK SW+
Sbjct: 610 LANIYSAARRWKEAAKWRASLRRTGIRKTPACSWI 644
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 144/267 (53%)
Query: 56 SARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
S R +F+ P++ + WN+II A + + ++ + + LKPD+FT + + +
Sbjct: 252 SVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANLKPDSFTLSSVLPLIA 311
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
EN D+ + +HG +I GL + +S+L+ Y+K + + ++ +VF +++ D + NS
Sbjct: 312 ENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNS 371
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
+I+G G +D+ L+ F ML P Y+ ++ + L +G+ +HG+ ++
Sbjct: 372 IIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNG 431
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
FD +++S LV MYA+C + +A +F+ + D+V+W+A+I G + G A+ F
Sbjct: 432 FDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFE 491
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANV 322
++ +G + + V +VL A + + V
Sbjct: 492 QMKTEGIEPNYVAFMAVLTACSHAGLV 518
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 230/507 (45%), Gaps = 41/507 (8%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +S S+ ++LHA V K + L+ +Y+ N+L + LF+ W S
Sbjct: 20 SIKSRSQAQQLHAQVLKFQASSL-CNLSLLLSIYSHINLLHDSLRLFNTLHFPPALAWKS 78
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+IR Y + + F +L + L PD+ + + +AC+ DL +HG I G
Sbjct: 79 VIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVG 138
Query: 135 LGRDSITSSALVTAYSKLSLIDE-------AIKVFDGVSDPDL-VLCNSMISGFAHCGFW 186
L D T +AL+ YSKL + + A +V D +++ V S++ G + G
Sbjct: 139 LDFDLYTGNALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVG--NQGRK 196
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGL----ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++ F++ + E ++ + S E ++GQ I S D
Sbjct: 197 VSDIEAFNYDVSCRSREFEAQVLEIDYKPRSEYREMEACNLGQQIKDISHSMSVD----- 251
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
S +F + DLV+W+ +I G ++ G YG+ L R++
Sbjct: 252 ---------------SVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGGANL 296
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D ++SVL A++ ++ G IHG I+ G + V V+S+L+DMY+KC + +
Sbjct: 297 KPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYR 356
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF ++ER+ I++NS+I G +G + +FFR ++ + P +FS+++ AC H
Sbjct: 357 VFTLLTERDGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTT 416
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
++ G+++ +T G +V + GN+ A I+ + D A++
Sbjct: 417 LHLGKQLHGYITRN-GFDENIFIASSLVDMYAKCGNIRTARQ-IFDRMRLRDMVSWTAMI 474
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKG 509
C ++G++ + A +LFE +G
Sbjct: 475 MGCALHGHA----LDAIELFEQMKTEG 497
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 102/207 (49%), Gaps = 2/207 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQR 67
VL L + +S+ KE+H + L + + A+ L+ +YA V+ S R+ F +R
Sbjct: 306 VLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCTRVVDSYRV-FTLLTER 364
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
WNSII F++ F+ +L ++KP +++++ I AC+ + L + +H
Sbjct: 365 DGISWNSIIAGCVQNGLFDEGLKFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLH 424
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G +G + +S+LV Y+K I A ++FD + D+V +MI G A G
Sbjct: 425 GYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHAL 484
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISG 214
+++LF+ M G P+ + +++
Sbjct: 485 DAIELFEQMKTEGIEPNYVAFMAVLTA 511
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+LH + + + F A+ LV +YA + +AR +FD+ R + W ++I AL
Sbjct: 421 KQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALH 480
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
DA LF+ + ++P+ + + ACS
Sbjct: 481 GHALDAIELFEQMKTEGIEPNYVAFMAVLTACS 513
>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
lyrata]
Length = 1038
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 161/535 (30%), Positives = 278/535 (51%), Gaps = 3/535 (0%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
HQ R +H LV K L+R+YA A ++F + P + + WNS+
Sbjct: 377 HQKWGRG--IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSL 434
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ ++ R DA + +++RT + T+ AC R +HG +VSGL
Sbjct: 435 MASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGL 494
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+ I +ALV+ Y K+ + + +V + D+V N++I G+A DK+L F
Sbjct: 495 FDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQT 554
Query: 196 MLRLGKTPDEYTLVGLISGLWEP-SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G + + T+V ++S P LL G+ +H + + + F+S ++V + L++MYA+C
Sbjct: 555 LRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 614
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++S+ +FN L + ++TW+A++ + G + L K+ G D + L+
Sbjct: 615 DLSSSQDLFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLS 674
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
AAAK A + G +HG ++ GFEL + +A DMYSKCG +G +++ R++ +
Sbjct: 675 AAAKLAVLEEGQQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 734
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N +I LG HG+ + E F +++E G+ P TF +LL AC HGGLV+ G + +
Sbjct: 735 WNILISALGRHGYFEEVCETFHEMLEMGIKPGHVTFVSLLTACSHGGLVDQGLAYYDMIA 794
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+++G++ EH I ++ LLG +G L EA +FI +P + V +LL+ C I+ + D
Sbjct: 795 KDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHRDLDRG 854
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A L + +P + V+ SN +A GRW+DV +R + ++K+ SWV
Sbjct: 855 RKAAENLSKLEPEDDSVFVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 909
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 207/428 (48%), Gaps = 1/428 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + LV +S ++H VAK+ LL D + +T ++ LY + ++ +R +F+
Sbjct: 160 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 219
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P R+V W S++ Y+ + ++K++ ++ + + + + +C D
Sbjct: 220 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESL 279
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R + G I SGL ++L++ + + +D A +F+ +S+ D + NS+++ +A
Sbjct: 280 GRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQ 339
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++S ++F+ M R + T+ L+S L + G+GIHG +K FDS V
Sbjct: 340 NGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMGFDSVVCV 399
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+ MYA A VF + DL++W++L+ + G AL + GK
Sbjct: 400 CNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGK 459
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V S LAA G ++HG V+ G + ++ +ALV MY K G + +
Sbjct: 460 SVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKIGGMSTSRR 519
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGG 421
V M R+++ +N++I G + +A F+ + +G++ + T ++L AC G
Sbjct: 520 VLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVSANYITVVSVLSACLVPGD 579
Query: 422 LVNDGREI 429
L+ G+ +
Sbjct: 580 LLERGKPL 587
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 194/407 (47%), Gaps = 3/407 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LHAL K + + L+ +Y + AR LFDK P R+ WN+++
Sbjct: 78 RALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEVSWNTMMSGIVRV 137
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL--PGLRFVHGGAIVSGLGRDSI 140
+ + F+ + +KP +F A + AC + + G++ VHG SGL D
Sbjct: 138 GLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVY 196
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
S+A++ Y L+ + KVF+ + D ++V S++ G++ G ++ + ++ M G
Sbjct: 197 VSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEG 256
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+E ++ +IS S+G+ I G +KS +S V + L+SM+ ++ A
Sbjct: 257 VECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNMGNVDYAN 316
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
++FN + D ++W++++ Y+Q G ++ F + + + ++++L+
Sbjct: 317 YIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVD 376
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G IHG V++ GF+ V V + L+ MY+ G VF+ M +++I++NS++
Sbjct: 377 HQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDLISWNSLMA 436
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
G + A +I G + + TF++ L AC + GR
Sbjct: 437 SFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGR 483
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 139/254 (54%), Gaps = 8/254 (3%)
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+G + + + G+ +H C+K ++ L++MY + + A ++F+ + + V
Sbjct: 66 TGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEV 125
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW-PGAVIHGY 331
+W+ +++G + G Y + + +F+K+ G K +IAS++ A +S +++ G +HG+
Sbjct: 126 SWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 185
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
V + G V VS+A++ +Y G + +VFE M +RN++++ S+++G G +
Sbjct: 186 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEV 245
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVND---GREIFTRMTEEYGIQAKTEHYIY 448
+ ++ + +G+ +E++ S ++ +C GL+ D GR+I ++ + G+++K
Sbjct: 246 IDIYKSMRGEGVECNENSMSLVISSC---GLLKDESLGRQIIGQVIKS-GLESKLAVENS 301
Query: 449 MVKLLGLAGNLEEA 462
++ + G GN++ A
Sbjct: 302 LISMFGNMGNVDYA 315
>gi|125537150|gb|EAY83638.1| hypothetical protein OsI_38867 [Oryza sativa Indica Group]
Length = 914
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 176/544 (32%), Positives = 275/544 (50%), Gaps = 63/544 (11%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD--KTPQRSVFLWNSIIRAYA 80
+ELHA V K L +P A +LV YAL +LPS+R +FD + P FL N+++RAYA
Sbjct: 369 RELHAQVLKQGLHLNPRAAARLVSAYALLRLLPSSRRVFDAIRDPHADAFLANTMLRAYA 428
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
L DA + F + R D+FTY+ + +A S P +R VH + G D+
Sbjct: 429 LGGAPRDALAAFSAMPRR----DSFTYSFLIKALSAAGVAP-VRAVHSHVVKLGSVEDTF 483
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+AL+ AYSK +A KVFD + + D+V N+ ++ G + +LFD M
Sbjct: 484 VGNALIDAYSKNGGFSDARKVFDEMPERDVVSWNTAMAAMVREGELAGARKLFDEM---- 539
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
P++ T+ W + ++ Y + + +A+
Sbjct: 540 --PEKDTVS------W---------------------------NTILDGYTKAGEVEAAF 564
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK--------------KADP 306
+F + ++V+WS +++GY ++GD A F K M GK + D
Sbjct: 565 ELFQRMPERNVVSWSTMVSGYCKKGDLEMARVIFDK--MPGKNLVTWTIMMKEASVELDV 622
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ S+LAA A+S ++ G IH YV + S V +AL+DM+ KCG + VF+T
Sbjct: 623 AAVVSILAACAESGSLSLGKRIHRYVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDT 682
Query: 367 MS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ +++ +++NS+I G +HG +A E F + ++G NPD T +L AC H G V++
Sbjct: 683 ETVQKDSVSWNSIIGGFAMHGHGDKALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDE 742
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR F+ M +YGI + EHY M+ LLG G ++EA I S+P + + G+LLS C
Sbjct: 743 GRRYFSNMERDYGIMPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSAC 802
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++ N + AEI ++L + P +LSN YAE G+W D+ K R + G +K AG
Sbjct: 803 RLHKNVEYAEIAVNELSKLQPSNAGNYAVLSNIYAEAGQWSDMAKARMQMKGTGSQKTAG 862
Query: 546 VSWV 549
SWV
Sbjct: 863 SSWV 866
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 175/398 (43%), Gaps = 56/398 (14%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F FL+ LS + ++ + +H+ V K + D F L+ Y+ N AR +FD
Sbjct: 449 FTYSFLIKALSAA--GVAPVRAVHSHVVKLGSVEDTFVGNALIDAYSKNGGFSDARKVFD 506
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R V WN+ + A A+ LF + P+
Sbjct: 507 EMPERDVVSWNTAMAAMVREGELAGARKLFDEM------PE------------------- 541
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+D+++ + ++ Y+K ++ A ++F + + ++V ++M+SG+
Sbjct: 542 --------------KDTVSWNTILDGYTKAGEVEAAFELFQRMPERNVVSWSTMVSGYCK 587
Query: 183 CGFWDKSLQLFD---------WMLRLGKTP---DEYTLVGLISGLWEPSLLSVGQGIHGF 230
G + + +FD W + + + D +V +++ E LS+G+ IH +
Sbjct: 588 KGDLEMARVIFDKMPGKNLVTWTIMMKEASVELDVAAVVSILAACAESGSLSLGKRIHRY 647
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS-LFHPDLVTWSALITGYSQQGDYGK 289
K + +V + L+ M+ +C C+N A +VF++ D V+W+++I G++ G K
Sbjct: 648 VRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHGDK 707
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALV 348
AL F ++ QG D V + +VL+A V G + + +G + ++
Sbjct: 708 ALELFAQMKQQGFNPDAVTMINVLSACTHMGFVDEGRRYFSNMERDYGIMPQIEHYGCMI 767
Query: 349 DMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLH 385
D+ + G + + + ++M E N + + S++ LH
Sbjct: 768 DLLGRGGLIKEAVDLIKSMPWEPNEVIWGSLLSACRLH 805
>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 937
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 277/535 (51%), Gaps = 3/535 (0%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
HQ R +H LV K L+R+YA A ++F + P + + WNS+
Sbjct: 276 HQKWGRG--IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ ++ R DA L +++ + + T+ AC R +HG +VSGL
Sbjct: 334 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 393
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+ I +ALV+ Y K+ + E+ +V + D+V N++I G+A DK+L F
Sbjct: 394 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 453
Query: 196 MLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G + + T+V ++S P LL G+ +H + + + F+S ++V + L++MYA+C
Sbjct: 454 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++S+ +FN L + +++TW+A++ + G + L K+ G D + L+
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
AAAK A + G +HG ++ GFE + +A DMYSKCG +G +++ R++ +
Sbjct: 574 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 633
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N +I LG HG+ + F +++E G+ P TF +LL AC HGGLV+ G + +
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++G++ EH I ++ LLG +G L EA +FI +P + V +LL+ C I+GN D
Sbjct: 694 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 753
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A L + +P + V+ SN +A GRW+DV +R + ++K+ SWV
Sbjct: 754 RKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 808
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 200/428 (46%), Gaps = 1/428 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + LV +S ++H VAK+ LL D + +T ++ LY + ++ +R +F+
Sbjct: 59 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P R+V W S++ Y+ + ++K + + + + + + +C D
Sbjct: 119 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 178
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R + G + SGL ++L++ + +D A +FD +S+ D + NS+ + +A
Sbjct: 179 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 238
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++S ++F M R + T+ L+S L G+GIHG +K FDS V
Sbjct: 239 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 298
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+ MYA A VF + DL++W++L+ + G AL + GK
Sbjct: 299 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V S LAA G ++HG V+ G + ++ +ALV MY K G + +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGG 421
V M R+++ +N++I G +A F+ + +G++ + T ++L AC G
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 422 LVNDGREI 429
L+ G+ +
Sbjct: 479 LLERGKPL 486
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 196/427 (45%), Gaps = 4/427 (0%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y + AR LFD P R+ WN+++ + + F+ + +KP +F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 107 YACITRACSENSDL--PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG 164
A + AC + + G++ VHG SGL D S+A++ Y L+ + KVF+
Sbjct: 61 IASLVTACGRSGSMFREGVQ-VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ D ++V S++ G++ G ++ + ++ M G +E ++ +IS S+G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ I G +KS +S V + L+SM ++ A ++F+ + D ++W+++ Y+Q
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
G ++ F + + + ++++L+ + G IHG V++ GF+ V V
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+ L+ MY+ G VF+ M +++I++NS++ G + A +I G +
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKS 359
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
+ TF++ L AC GR I + G+ +V + G G + E+
Sbjct: 360 VNYVTFTSALAACFTPDFFEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 465 FIWSLPK 471
+ +P+
Sbjct: 419 VLLQMPR 425
>gi|356557931|ref|XP_003547263.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g04370-like [Glycine max]
Length = 764
Score = 272 bits (695), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/533 (29%), Positives = 270/533 (50%), Gaps = 4/533 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ + LH + D + ++ +Y + +R LFD QR + WNS++ A
Sbjct: 183 LAHVQCLHGSAILYGFMSDINLSNSMLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSA 242
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
YA + L K + +PD T+ + + +L R +HG + + D
Sbjct: 243 YAQIGYICEVLLLLKTMRIQGFEPDPQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLD 302
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ ++L+ Y K ID A ++F+ D D+VL +MISG G DK+L +F ML+
Sbjct: 303 AHVETSLIVMYLKGGNIDIAFRMFERSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLK 362
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G T+ +I+ + ++G +HG+ + + LV+M+A+C ++
Sbjct: 363 FGVKSSTATMASVITACAQLGSYNLGTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQ 422
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
+ VF+ + +LV+W+A+ITGY+Q G KAL+ F ++ + D + I S+L A
Sbjct: 423 SSIVFDKMNKRNLVSWNAMITGYAQNGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCAS 482
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ + G IH +VI++G ++V ++LVDMY KCG L + + F M ++++++++
Sbjct: 483 TGQLHLGKWIHSFVIRNGLRPCILVDTSLVDMYCKCGDLDIAQRCFNQMPSHDLVSWSAI 542
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I+G G HG A F+ +E G+ P+ F ++L +C H GLV G I+ MT ++G
Sbjct: 543 IVGYGYHGKGETALRFYSKFLESGMKPNHVIFLSVLSSCSHNGLVEQGLNIYESMTRDFG 602
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA--VSGALLSCCHIYGNSDLAEI 496
I EH+ +V LL AG +EEAY+ K DP V G +L C GN++L +
Sbjct: 603 IAPNLEHHACVVDLLSRAGRVEEAYNLYKK--KFSDPVLDVLGIILDACRANGNNELGDT 660
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+A+ + P V L++ YA +W++V + + GL+K G S++
Sbjct: 661 IANDILMLKPMDAGNFVQLAHCYASINKWEEVGEAWTHMRSLGLKKIPGWSFI 713
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/407 (30%), Positives = 213/407 (52%), Gaps = 3/407 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH + + L D + A+ L+ YA AR +FD P+R+V W SII Y+ R
Sbjct: 91 LHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGR 150
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A SLF + R ++P + T + SE L ++ +HG AI+ G D S++
Sbjct: 151 VPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSE---LAHVQCLHGSAILYGFMSDINLSNS 207
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
+++ Y K I+ + K+FD + DLV NS++S +A G+ + L L M G PD
Sbjct: 208 MLSMYGKCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPD 267
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T ++S L +G+ +HG L++ FD +V + L+ MY + ++ A+ +F
Sbjct: 268 PQTFGSVLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFE 327
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
D+V W+A+I+G Q G KAL FR++ G K+ +ASV+ A A+ +
Sbjct: 328 RSLDKDVVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNL 387
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +HGY+ +H + + ++LV M++KCG+L VF+ M++RN++++N++I G
Sbjct: 388 GTSVHGYMFRHELPMDIATQNSLVTMHAKCGHLDQSSIVFDKMNKRNLVSWNAMITGYAQ 447
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+G+ +A F ++ PD T +LL C G ++ G+ I +
Sbjct: 448 NGYVCKALFLFNEMRSDHQTPDSITIVSLLQGCASTGQLHLGKWIHS 494
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 192/362 (53%), Gaps = 3/362 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
+N+II ++ + + ++L+T + D +T+ + +ACS + +H +
Sbjct: 37 FNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACSSLNLFSLGLSLHQRIL 96
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
VSGL D+ +S+L+ Y+K D A KVFD + + ++V S+I ++ G ++
Sbjct: 97 VSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSIIGCYSRTGRVPEAFS 156
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LFD M R G P T++ L+ G+ E L+ Q +HG + F S +S+ ++SMY
Sbjct: 157 LFDEMRRQGIQPSSVTMLSLLFGVSE---LAHVQCLHGSAILYGFMSDINLSNSMLSMYG 213
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+C + + +F+ + DLV+W++L++ Y+Q G + L + + +QG + DP S
Sbjct: 214 KCRNIEYSRKLFDYMDQRDLVSWNSLVSAYAQIGYICEVLLLLKTMRIQGFEPDPQTFGS 273
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
VL+ AA + G +HG +++ F+L V ++L+ MY K G + + ++FE +++
Sbjct: 274 VLSVAASRGELKLGRCLHGQILRTCFDLDAHVETSLIVMYLKGGNIDIAFRMFERSLDKD 333
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++ + ++I GL +G +A FR +++ G+ +T ++++ AC G N G +
Sbjct: 334 VVLWTAMISGLVQNGSADKALAVFRQMLKFGVKSSTATMASVITACAQLGSYNLGTSVHG 393
Query: 432 RM 433
M
Sbjct: 394 YM 395
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 84/173 (48%), Gaps = 15/173 (8%)
Query: 265 SLFHPD-----LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
SL HP + +++A+I +S QG + + L + + +D S+L A + S
Sbjct: 23 SLPHPSSASATINSFNAIINHHSSQGAHRQVLATYASMLKTHVPSDAYTFPSLLKACS-S 81
Query: 320 ANVWP-GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
N++ G +H ++ G L ++S+L++ Y+K G+ + +VF+ M ERN++ + S+
Sbjct: 82 LNLFSLGLSLHQRILVSGLSLDAYIASSLINFYAKFGFADVARKVFDFMPERNVVPWTSI 141
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL--------CACCHGGLV 423
I G +AF F ++ +G+ P T +LL C HG +
Sbjct: 142 IGCYSRTGRVPEAFSLFDEMRRQGIQPSSVTMLSLLFGVSELAHVQCLHGSAI 194
>gi|357116106|ref|XP_003559825.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Brachypodium distachyon]
Length = 739
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 173/538 (32%), Positives = 278/538 (51%), Gaps = 21/538 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHAL +++ L+ D F LV Y+ +L +AR +FD+ P R + WN++I A
Sbjct: 160 RQLHALASRSGLVADVFVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLA-- 217
Query: 83 HRFNDAKS----LFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ D + +F LL+ ++PD + + AC + R VH + G+
Sbjct: 218 -QDGDCPTEVILVFLRLLKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGV 276
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+ LV Y K A K+ + + D++ + IS + +++LF+
Sbjct: 277 EGKVSIGNVLVAMYYKSGAAGCARKLLKSMDERDVISWTTAISMDGE----EDAIELFNG 332
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M + G P+E T V L+S L GQ IH CLK+ ++ L++MYA+
Sbjct: 333 MRQDGVPPNEVTFVALMSALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRR 392
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M+ A VF+ + P+++ W+ALI+GY+Q +AL F + ++ + + ASVL+A
Sbjct: 393 MDDARTVFDRMPRPEIIAWNALISGYAQNELCNEALQVFSCM-VRCLRPNETTFASVLSA 451
Query: 316 --AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A ++ ++ G + H ++ G ++S VS AL+DMY+K G L + F+ R++I
Sbjct: 452 VTAVETVSMAYGEMYHCQSLKLGLKVSEYVSGALIDMYAKRGSLEESRKAFDVTVHRSLI 511
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ ++I HG F D++ G+ PD ++L AC H G VN GREIF M
Sbjct: 512 AWTAIISAHAKHGNYDTVMNLFDDMVCSGVAPDGVVLLSVLTACRHSGAVNTGREIFDSM 571
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIYGNS 491
E+ ++ EHY ++ +LG AG LEEA + L P P+VS +LL C I+GN+
Sbjct: 572 PAEHHVEPWPEHYACVIDMLGRAGRLEEAEELM--LQMPTGPSVSALQSLLGACRIHGNT 629
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+AE VA L E +P + V+LSN YAE G W V K+R ++ + G+RKE G SWV
Sbjct: 630 SIAERVAGILTETEPTESGAYVLLSNIYAEKGDWGGVAKVRREMREKGVRKEIGFSWV 687
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 134/530 (25%), Positives = 234/530 (44%), Gaps = 61/530 (11%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LH L + L F L YA + + PSA +F R V +N+I+ A L
Sbjct: 59 LHGLAIASGLDAFSFVTNSLAARYAKSASSFPSAAKVFHTARARDVSSYNTILSA--LPD 116
Query: 84 RFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGL---RFVHGGAIVSGLGRDS 139
R +A + +LR+ ++PD T + + G+ R +H A SGL D
Sbjct: 117 R-GEALAFAAWMLRSGDVRPDAVTLTVALSLAASRGEADGVWIVRQLHALASRSGLVADV 175
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ALVTAYS+ +L+ A +VFD + DLV N+MI G A G D ++ LRL
Sbjct: 176 FVGNALVTAYSRGALLGAARRVFDEMPARDLVSWNAMICGLAQDG--DCPTEVILVFLRL 233
Query: 200 GK------TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
K PD ++ +I + +G+ +H F +K + + +VLV+MY +
Sbjct: 234 LKDGGAAVRPDRISVCSVIPACGSEGKIELGRQVHSFTVKLGVEGKVSIGNVLVAMYYKS 293
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
A + S+ D+++W+ T S G+ A+ F + G + V +++
Sbjct: 294 GAAGCARKLLKSMDERDVISWT---TAISMDGEE-DAIELFNGMRQDGVPPNEVTFVALM 349
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+A A G +IH ++ G +++L+ MY+K + VF+ M II
Sbjct: 350 SALAAGCPARYGQMIHTVCLKTGVSDEAAAANSLITMYAKLRRMDDARTVFDRMPRPEII 409
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG-REIFTR 432
+N++I G + +A + F ++ + L P+E+TF+++L A V+ E++
Sbjct: 410 AWNALISGYAQNELCNEALQVFSCMV-RCLRPNETTFASVLSAVTAVETVSMAYGEMYHC 468
Query: 433 MTEEYGIQAKTEHYI--YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
+ + G+ K Y+ ++ + G+LEE+ K D V +L+
Sbjct: 469 QSLKLGL--KVSEYVSGALIDMYAKRGSLEESR-------KAFDVTVHRSLI-------- 511
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
A+ ++S +A+ G +D VM L DD+V +G+
Sbjct: 512 -------------------AWTAIIS-AHAKHGNYDTVMNLFDDMVCSGV 541
>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 928
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 162/535 (30%), Positives = 277/535 (51%), Gaps = 3/535 (0%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
HQ R +H LV K L+R+YA A ++F + P + + WNS+
Sbjct: 259 HQKWGRG--IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ ++ R DA L +++ + + T+ AC R +HG +VSGL
Sbjct: 317 MASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGL 376
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+ I +ALV+ Y K+ + E+ +V + D+V N++I G+A DK+L F
Sbjct: 377 FYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT 436
Query: 196 MLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G + + T+V ++S P LL G+ +H + + + F+S ++V + L++MYA+C
Sbjct: 437 MRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++S+ +FN L + +++TW+A++ + G + L K+ G D + L+
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
AAAK A + G +HG ++ GFE + +A DMYSKCG +G +++ R++ +
Sbjct: 557 AAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPS 616
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N +I LG HG+ + F +++E G+ P TF +LL AC HGGLV+ G + +
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 676
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++G++ EH I ++ LLG +G L EA +FI +P + V +LL+ C I+GN D
Sbjct: 677 RDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRG 736
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A L + +P + V+ SN +A GRW+DV +R + ++K+ SWV
Sbjct: 737 RKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWV 791
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 200/428 (46%), Gaps = 1/428 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + LV +S ++H VAK+ LL D + +T ++ LY + ++ +R +F+
Sbjct: 42 FVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFE 101
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P R+V W S++ Y+ + ++K + + + + + + +C D
Sbjct: 102 EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESL 161
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R + G + SGL ++L++ + +D A +FD +S+ D + NS+ + +A
Sbjct: 162 GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQ 221
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++S ++F M R + T+ L+S L G+GIHG +K FDS V
Sbjct: 222 NGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCV 281
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+ MYA A VF + DL++W++L+ + G AL + GK
Sbjct: 282 CNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V S LAA G ++HG V+ G + ++ +ALV MY K G + +
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGG 421
V M R+++ +N++I G +A F+ + +G++ + T ++L AC G
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 422 LVNDGREI 429
L+ G+ +
Sbjct: 462 LLERGKPL 469
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 188/409 (45%), Gaps = 4/409 (0%)
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL--PG 122
P R+ WN+++ + + F+ + +KP +F A + AC + + G
Sbjct: 2 PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREG 61
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
++ VHG SGL D S+A++ Y L+ + KVF+ + D ++V S++ G++
Sbjct: 62 VQ-VHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++ + ++ M G +E ++ +IS S+G+ I G +KS +S V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+SM ++ A ++F+ + D ++W+++ Y+Q G ++ F +
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ + ++++L+ + G IHG V++ GF+ V V + L+ MY+ G
Sbjct: 241 EVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANL 300
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF+ M +++I++NS++ G + A +I G + + TF++ L AC
Sbjct: 301 VFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
GR I + G+ +V + G G + E+ + +P+
Sbjct: 361 FEKGR-ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPR 408
>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 147/485 (30%), Positives = 266/485 (54%), Gaps = 22/485 (4%)
Query: 88 AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVT 147
A + + + + ++ D+F + +ACS+ S + +HG ++ +GL D +AL+
Sbjct: 93 ALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNALMQ 152
Query: 148 AYSKL----------------------SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
YS+ ++I I +F G S +V +MI+G+ C
Sbjct: 153 MYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAGYIRCND 212
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++ +LF M+ P++ T++ LI + +G+ +H + L++ F +++
Sbjct: 213 LEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGMSLALATA 272
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MY +C + SA +F+S+ + D++TW+A+I+ Y+Q A F ++ G + +
Sbjct: 273 LVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMRDNGVRPN 332
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ + S+L+ A + + G H Y+ + G E+ V++ +AL+DMY+KCG + ++F
Sbjct: 333 ELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFS 392
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+R+I T+N ++ G G+HG+ +A + F ++ G+ P++ TF L AC H GLV +
Sbjct: 393 EAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACSHAGLVVE 452
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G+ +F +M ++G+ K EHY MV LLG AG L+EAY I S+P + A+ GA+L+ C
Sbjct: 453 GKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAAC 512
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+ NS++ E+ A +L +P+ YKV++SN YA RW+DV +R + D G++KE G
Sbjct: 513 KIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDTGIKKEPG 572
Query: 546 VSWVS 550
+S +
Sbjct: 573 MSSIE 577
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 190/426 (44%), Gaps = 29/426 (6%)
Query: 15 SHQSLSRT-KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
S S++R KE+H K L+ D F L+++Y+ L SAR+LFDK +R V W+
Sbjct: 120 SQISVARMGKEIHGFSVKNGLVSDVFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWS 179
Query: 74 SIIRAY-------------------ALAHRFND---AKSLFKNLLRTQLKPDNFTYACIT 111
++IRAY A R ND + LF ++ + P++ T +
Sbjct: 180 TMIRAYITLFYGFSQRSIVSWTAMIAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLI 239
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
+C + + +H + +G G ++ALV Y K I A +FD + + D++
Sbjct: 240 ISCGFVGAVQLGKRLHAYILRNGFGMSLALATALVDMYGKCGEIRSARAIFDSMKNKDVM 299
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
+MIS +A D + QLF M G P+E T+V L+S L +G+ H +
Sbjct: 300 TWTAMISAYAQANCIDYAFQLFVQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYI 359
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
K + + + L+ MYA+C ++ A +F+ D+ TW+ ++ GY G KAL
Sbjct: 360 DKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKAL 419
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS--SALVD 349
F ++ G K + + L A + + V G + +I H F L V +VD
Sbjct: 420 KLFTEMETLGVKPNDITFIGALHACSHAGLVVEGKGLFEKMI-HDFGLVPKVEHYGCMVD 478
Query: 350 MYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+ + G L ++ E+M NI + +++ +H + R+++ L P
Sbjct: 479 LLGRAGLLDEAYKMIESMPVTPNIAIWGAMLAACKIHKNSNMGELAARELL--ALEPQNC 536
Query: 409 TFSALL 414
+ L+
Sbjct: 537 GYKVLM 542
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 24/184 (13%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L + +L K HA + K + D T L+ +YA + A+ LF + R
Sbjct: 339 LLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDISGAQRLFSEAIDRD 398
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN ++ Y + A LF + +KP++ T+ ACS H
Sbjct: 399 ICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACS-----------HA 447
Query: 129 GAIVSGLG--RDSITSSALVTAYS----------KLSLIDEAIKVFDGVS-DPDLVLCNS 175
G +V G G I LV + L+DEA K+ + + P++ + +
Sbjct: 448 GLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIWGA 507
Query: 176 MISG 179
M++
Sbjct: 508 MLAA 511
>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Glycine max]
Length = 821
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 268/516 (51%), Gaps = 9/516 (1%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ + +V L A+ +FD P++ V WNSII Y F ++ +F ++
Sbjct: 181 YVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGG 240
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFV----HGGAIVSGLGRDSITSSALVTAYSKLSL 154
L+P T A + +AC ++ GL+ V H + G+G D ++LV YS L
Sbjct: 241 GLRPSPVTMANLLKACGQS----GLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNLGD 296
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
A VFD + L+ N+MISG+ G +S LF +++ G D TLV LI G
Sbjct: 297 TGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRG 356
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ S L G+ +H ++ +S+ +S+ +V MY++C + A VF + +++TW
Sbjct: 357 CSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITW 416
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+A++ G SQ G AL F ++ + A+ V + S++ A ++ G +H + I+
Sbjct: 417 TAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIR 476
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFET-MSERNIITYNSVILGLGLHGFTYQAFE 393
HG+ +++SAL+DMY+KCG + ++F +++I NS+I+G G+HG A
Sbjct: 477 HGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALG 536
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
+ +IE+ L P+++TF +LL AC H GLV +G+ +F M ++ ++ + +HY +V L
Sbjct: 537 VYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLH 596
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
AG LEEA + +P V ALLS C + N+++ +A +L D V
Sbjct: 597 SRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYV 656
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
MLSN YAE +W+ V +R + G++K G S +
Sbjct: 657 MLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLI 692
Score = 185 bits (470), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 214/419 (51%), Gaps = 2/419 (0%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L + +L K +HA + K + + F A KL+R+Y+ L AR +FD+ +
Sbjct: 53 LHQFSNTLIHVKSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAV 112
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN-SDLPGLRFVHGGA 130
N++I + + + LF+ + ++ +++T +AC++ D G+ + A
Sbjct: 113 CNAMIAGFLRNQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRA-A 171
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ G S++V K + +A KVFDG+ + D+V NS+I G+ G + +S+
Sbjct: 172 VRRGFHLHLYVGSSMVNFLVKRGYLADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESI 231
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
Q+F M+ G P T+ L+ + L VG H + L + +V + LV MY
Sbjct: 232 QMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMY 291
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+ SA VF+S+ L++W+A+I+GY Q G ++ FR+L G D +
Sbjct: 292 SNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMIPESYALFRRLVQSGSGFDSGTLV 351
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S++ ++++++ G ++H +I+ E +++S+A+VDMYSKCG + VF M ++
Sbjct: 352 SLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKK 411
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
N+IT+ ++++GL +G+ A + F + E+ + + T +L+ C H G + GR +
Sbjct: 412 NVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTV 470
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 164/344 (47%), Gaps = 2/344 (0%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
H+ V + D F T LV +Y+ SA ++FD RS+ WN++I Y
Sbjct: 269 HSYVLALGMGNDVFVLTSLVDMYSNLGDTGSAALVFDSMCSRSLISWNAMISGYVQNGMI 328
Query: 86 NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSAL 145
++ +LF+ L+++ D+ T + R CS+ SDL R +H I L + S+A+
Sbjct: 329 PESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESHLVLSTAI 388
Query: 146 VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDE 205
V YSK I +A VF + +++ +M+ G + G+ + +L+LF M +
Sbjct: 389 VDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANS 448
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
TLV L+ L+ G+ +H ++ + ++S L+ MYA+C ++SA +FN+
Sbjct: 449 VTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNN 508
Query: 266 LFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
FH D++ +++I GY G AL + ++ + K + S+L A + S V
Sbjct: 509 EFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVEE 568
Query: 325 G-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
G A+ H H + LVD++S+ G L ++ + M
Sbjct: 569 GKALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQM 612
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 3/265 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + LH+ + + L +T +V +Y+ + A I+F + +++V W +++
Sbjct: 363 LENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITWTAMLVG 422
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ DA LF + ++ ++ T + C+ L R VH I G D
Sbjct: 423 LSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGYAFD 482
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDG-VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
++ +SAL+ Y+K I A K+F+ D++LCNSMI G+ G +L ++ M+
Sbjct: 483 AVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMI 542
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGI-HGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
P++ T V L++ L+ G+ + H + LV +++R +
Sbjct: 543 EERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLHSRAGRL 602
Query: 257 NSAYHVFNSL-FHPDLVTWSALITG 280
A + + F P AL++G
Sbjct: 603 EEADELVKQMPFQPSTDVLEALLSG 627
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ-RSVFLWNSII 76
SL++ + +HA + D + L+ +YA + SA LF+ + V L NS+I
Sbjct: 463 SLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMI 522
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y + A ++ ++ +LKP+ T+ + ACS + + G A+ +
Sbjct: 523 MGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLTACSHSGLVE-----EGKALFHSME 577
Query: 137 RDSITS------SALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFAHCGFWDKS 189
RD + LV +S+ ++EA ++ + P + +++SG +
Sbjct: 578 RDHDVRPQHKHYACLVDLHSRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMG 637
Query: 190 LQLFDWMLRL 199
+Q+ D ++ L
Sbjct: 638 IQIADRLISL 647
>gi|356561794|ref|XP_003549163.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19191,
mitochondrial-like [Glycine max]
Length = 615
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/550 (29%), Positives = 281/550 (51%), Gaps = 11/550 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+L+ + S+ LH V K D F T LV +Y+ + + SAR +FD+ PQR
Sbjct: 51 LLLKACANLPSIQHGTMLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQR 110
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-- 125
SV WN+++ AY+ + A SL K + +P T+ I S S+L F
Sbjct: 111 SVVSWNAMVSAYSRRSSMDQALSLLKEMWVLGFEPTASTFVSI---LSGYSNLDSFEFHL 167
Query: 126 ----VHGGAIVSGLGRDSIT-SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+H I G+ ++ +++L+ Y + L+DEA KVFD + + ++ +MI G+
Sbjct: 168 LGKSIHCCLIKLGIVYLEVSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGY 227
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G ++ LF M D + LISG + L + +H LK + D
Sbjct: 228 VKIGHAVEAYGLFYQMQHQSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKD 287
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V ++L++MYA+C + SA +F+ + +++W+++I GY G G+AL FR++
Sbjct: 288 PVENLLITMYAKCGNLTSARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRT 347
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ + +A+V++A A ++ G I Y+ +G E V ++L+ MYSKCG +
Sbjct: 348 DIRPNGATLATVVSACADLGSLSIGQEIEEYIFLNGLESDQQVQTSLIHMYSKCGSIVKA 407
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCH 419
+VFE ++++++ + S+I +HG +A F + +G+ PD ++++ AC H
Sbjct: 408 REVFERVTDKDLTVWTSMINSYAIHGMGNEAISLFHKMTTAEGIMPDAIVYTSVFLACSH 467
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV +G + F M +++GI EH ++ LLG G L+ A + I +P V V G
Sbjct: 468 SGLVEEGLKYFKSMQKDFGITPTVEHCTCLIDLLGRVGQLDLALNAIQGMPPDVQAQVWG 527
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
LLS C I+GN +L E+ +L ++ P V+++N Y G+W + +R+ + G
Sbjct: 528 PLLSACRIHGNVELGELATVRLLDSSPGSSGSYVLMANLYTSLGKWKEAHMMRNSMDGKG 587
Query: 540 LRKEAGVSWV 549
L KE+G S V
Sbjct: 588 LVKESGWSQV 597
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 202/407 (49%), Gaps = 17/407 (4%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+RS++ WN +IR F +++ ++ + + +N TY + +AC+ +
Sbjct: 8 RRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGTM 67
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG + G D+ +ALV YSK S + A +VFD + +V N+M+S ++
Sbjct: 68 LHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRSS 127
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGL-----WEPSLLSVGQGIHGFCLKSSFDSYD 240
D++L L M LG P T V ++SG +E LL G+ IH +K +
Sbjct: 128 MDQALSLLKEMWVLGFEPTASTFVSILSGYSNLDSFEFHLL--GKSIHCCLIKLGIVYLE 185
Query: 241 Y-VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+++ L+ MY + M+ A VF+ + +++W+ +I GY + G +A F ++
Sbjct: 186 VSLANSLMGMYVQFCLMDEARKVFDLMDEKSIISWTTMIGGYVKIGHAVEAYGLFYQMQH 245
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
Q D V+ ++++ + ++ + +H V++ G V + L+ MY+KCG L
Sbjct: 246 QSVGIDFVVFLNLISGCIQVRDLLLASSVHSLVLKCGCNEKDPVENLLITMYAKCGNLTS 305
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++F+ + E++++++ S+I G G +A + FR +I + P+ +T + ++ AC
Sbjct: 306 ARRIFDLIIEKSMLSWTSMIAGYVHLGHPGEALDLFRRMIRTDIRPNGATLATVVSACAD 365
Query: 420 GGLVNDGREIFTRMTEEY----GIQAKTEHYIYMVKLLGLAGNLEEA 462
G ++ G+EI EEY G+++ + ++ + G++ +A
Sbjct: 366 LGSLSIGQEI-----EEYIFLNGLESDQQVQTSLIHMYSKCGSIVKA 407
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%)
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGA 326
F L TW+ +I + G + + L + + G + + +L A A ++ G
Sbjct: 7 FRRSLYTWNLMIRDSTNNGFFTQTLNIYSSMAHSGVHGNNLTYPLLLKACANLPSIQHGT 66
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
++HG+V++ GF+ V +ALVDMYSKC ++ QVF+ M +R+++++N+++
Sbjct: 67 MLHGHVLKLGFQADTFVQTALVDMYSKCSHVASARQVFDEMPQRSVVSWNAMVSAYSRRS 126
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALL 414
QA +++ G P STF ++L
Sbjct: 127 SMDQALSLLKEMWVLGFEPTASTFVSIL 154
>gi|449445027|ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/542 (30%), Positives = 277/542 (51%), Gaps = 2/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L +S + + T+ +H K L LV Y + + +F++T +++
Sbjct: 267 LLPISAALEDEEMTRRIHCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKN 326
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNSII A R DA + F+ ++ +P++ T + I E + +HG
Sbjct: 327 EVSWNSIINGLACKGRCWDALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHG 386
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
++ G D +++L+ Y+K EA +F + ++V N+MI+ +A +
Sbjct: 387 FSMRMGTETDIFIANSLIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLE 446
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++ M G+ P+ T ++ L G+ IH ++ S +VS+ L+
Sbjct: 447 AIRFVIQMQETGECPNAVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLID 506
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C C++SA +VFN+ D V+++ LI GYS+ D ++L F ++ + GKK D V
Sbjct: 507 MYAKCGCLHSARNVFNT-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVS 565
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
V++A A A + G +HG +++ + VS++L+D Y+KCG + + ++F +
Sbjct: 566 FVGVISACANLAALKQGKEVHGVALRNHLYSHLFVSNSLLDFYTKCGRIDIACRLFNQIL 625
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+++ ++N++ILG G+ G A F + + + D ++ A+L AC HGGLV G +
Sbjct: 626 FKDVASWNTMILGYGMIGELETAISMFEAMRDDTVQYDLVSYIAVLSACSHGGLVERGWQ 685
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F+ M + ++ HY MV LLG AG +EEA I LP D + GALL C IY
Sbjct: 686 YFSEMLAQR-LEPTEMHYTCMVDLLGRAGFVEEAAKLIQQLPIAPDANIWGALLGACRIY 744
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN +L A LFE P+ Y ++LSN YAE GRWD+ K+R+ + G +K G SW
Sbjct: 745 GNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSW 804
Query: 549 VS 550
V
Sbjct: 805 VQ 806
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 118/424 (27%), Positives = 211/424 (49%), Gaps = 4/424 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+L + + E+H +V K D + L+ LY L AR LFD+ P+R
Sbjct: 164 FVLKLCSDSFDICKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPER 223
Query: 68 SVFLWNSIIRAYALAHRFNDAKSL-FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
V WN+II ++ + +A++ F +LR+ +KP+ + + + D R +
Sbjct: 224 DVVSWNTIIGLLSVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMTRRI 283
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG-F 185
H ++ GL T +ALV AY K + +VF+ + + V NS+I+G A G
Sbjct: 284 HCYSVKVGLDSQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRC 343
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
WD +L F M+ G P+ T+ ++ L E G+ IHGF ++ ++ ++++
Sbjct: 344 WD-ALNAFRMMIDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANS 402
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MYA+ A +F++L ++V+W+A+I Y+ +A+ + ++ G+ +
Sbjct: 403 LIDMYAKSGHSTEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPN 462
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V +VL A A+ + PG IH ++ G + VS++L+DMY+KCG L VF
Sbjct: 463 AVTFTNVLPACARLGFLGPGKEIHAMGVRIGLTSDLFVSNSLIDMYAKCGCLHSARNVFN 522
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
T S ++ ++YN +I+G Q+ F ++ G PD +F ++ AC + +
Sbjct: 523 T-SRKDEVSYNILIIGYSETDDCLQSLNLFSEMRLLGKKPDVVSFVGVISACANLAALKQ 581
Query: 426 GREI 429
G+E+
Sbjct: 582 GKEV 585
Score = 178 bits (451), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 217/432 (50%), Gaps = 9/432 (2%)
Query: 5 LHFLVLELSKSHQSLSRTKELHAL-VAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
+H +L L QSL +TK++HAL + L R L+ YA S LF++
Sbjct: 56 IHINLLTLCSKVQSLLQTKQVHALGILNGFLPRSVSLCASLILNYAKFQHPGSFCSLFNQ 115
Query: 64 TPQ--RSVFLWNSIIRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
T Q R+ FLWN++IRA+++A D + ++R ++ D+ T+ + + CS++ D+
Sbjct: 116 TFQNCRTAFLWNTLIRAHSIAWNGTFDGFETYNRMVRRGVQLDDHTFPFVLKLCSDSFDI 175
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
VHG G D + L+ Y +++A ++FD + + D+V N++I
Sbjct: 176 CKGMEVHGVVFKLGFDTDVYVGNTLLMLYGNCGFLNDARRLFDEMPERDVVSWNTIIGLL 235
Query: 181 AHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGL--ISGLWEPSLLSVGQGIHGFCLKSSFD 237
+ G + ++ + WM LR P+ +++ L IS E ++ + IH + +K D
Sbjct: 236 SVNGDYTEARNYYFWMILRSVIKPNLVSVISLLPISAALEDEEMT--RRIHCYSVKVGLD 293
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
S + LV Y +C + + + VFN + V+W+++I G + +G AL FR +
Sbjct: 294 SQVTTCNALVDAYGKCGSVKALWQVFNETVEKNEVSWNSIINGLACKGRCWDALNAFRMM 353
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + + V I+S+L + G IHG+ ++ G E + ++++L+DMY+K G+
Sbjct: 354 IDAGAQPNSVTISSILPVLVELECFKAGKEIHGFSMRMGTETDIFIANSLIDMYAKSGHS 413
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+F + RNI+++N++I L+ +A F + E G P+ TF+ +L AC
Sbjct: 414 TEASTIFHNLDRRNIVSWNAMIANYALNRLPLEAIRFVIQMQETGECPNAVTFTNVLPAC 473
Query: 418 CHGGLVNDGREI 429
G + G+EI
Sbjct: 474 ARLGFLGPGKEI 485
>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 269/503 (53%), Gaps = 17/503 (3%)
Query: 48 YALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTY 107
+A N + AR +FD+ ++ WN ++ AY R DA+ LF + + ++ ++
Sbjct: 163 FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEI----VSW 218
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
C+ L R + V RD I+ + ++T Y++ L+ EA ++F+ +
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPV----RDKISWNIMITGYAQNGLLSEARRLFEELPI 274
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
D+ +M+SGF G D++ ++F+ M +E + +I+G + + + +
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAGYVQSQQIEKAREL 330
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
+ S++ +V+ YA+C ++ A +F+ + D ++W+A+I+GY+Q G
Sbjct: 331 FDQMPSRNTSSWN----TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQS 386
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
+AL+ F K+ G + +A L++ A+ A + G +HG +++ GF+ + +AL
Sbjct: 387 EEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNAL 446
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+ MY KCG + VFE ++E++I+++N++I G HGF +A F + ++ + PD+
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDD 505
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
T +L AC H GLV+ G E F M + YGI A +HY M+ LLG AG L+EA + +
Sbjct: 506 VTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMK 565
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
S+P D A GALL I+G+++L E A ++FE +P V+LSN YA GRW +
Sbjct: 566 SMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWRE 625
Query: 528 VMKLRDDIVDNGLRKEAGVSWVS 550
V ++R + D G++K G SWV
Sbjct: 626 VREMRSKMRDKGVKKVPGYSWVE 648
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 182/405 (44%), Gaps = 45/405 (11%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+RD F T +V + N +L A +F++ P+++ WN++I Y + + A+ LF
Sbjct: 274 IRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF-- 331
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+P R++ + + +VT Y++
Sbjct: 332 -----------------------DQMP--------------SRNTSSWNTMVTGYAQCGN 354
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
ID+A +FD + D + +MISG+A G +++L LF M R G + L +S
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
E + L +G+ +HG +K+ F + + L++MY +C + A+ VF + D+V+W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ +I GY++ G +AL F + M K D V + VL+A + + V G + Q
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQ 533
Query: 335 -HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAF 392
+G + + ++D+ + G L + + ++M + T+ +++ +HG T
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593
Query: 393 EFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREIFTRMTEE 436
+ + E + PD S LL G + RE+ ++M ++
Sbjct: 594 KAAEKVFE--MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 137/276 (49%), Gaps = 15/276 (5%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q + + +EL + R+ +V YA + A+ILFD+ PQR W ++I
Sbjct: 322 QQIEKARELFDQMPS----RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA + + +A LF + R + AC +C+E + L + +HG + +G
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
I +AL+ Y K I+EA VF+ +++ D+V N+MI+G+A GF ++L LF+ M
Sbjct: 438 TGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM 497
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-----SVLVSMYA 251
++ PD+ TLVG++S L V +G+ F S + +Y + + ++ +
Sbjct: 498 -KMTIKPDDVTLVGVLSACSHTGL--VDKGMEYF--NSMYQNYGITANAKHYTCMIDLLG 552
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
R ++ A ++ S+ F+PD TW AL+ GD
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 195/449 (43%), Gaps = 79/449 (17%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
+ + Y SA +F+ +RS +N++I Y ++F+ A+ +F+ +
Sbjct: 64 NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM------ 117
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD RD I+ + +++ Y K + A +
Sbjct: 118 PD---------------------------------RDLISWNVMLSGYVKNGNLSAARAL 144
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
F+ + + D+V N+M+SGFA GF +++ ++FD ML +E + GL+S + +
Sbjct: 145 FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRI 200
Query: 222 SVGQGIHGFCLKSSFDS---YDYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
+ + FDS ++ VS + L+ Y R ++ A +F+ + D ++W+ +
Sbjct: 201 EDARRL--------FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIM 252
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA-----SVLAAAAKSANVWP-------G 325
ITGY+Q G +A F +L ++ A +++ +L A + P
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312
Query: 326 AVIHGYV----IQHGFELSVMVSS-------ALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A+I GYV I+ EL + S +V Y++CG + +F+ M +R+ I+
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS 372
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ ++I G G + +A F + G + S + L +C + G+++ R+
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
+ G Q ++ + G G++EEA+
Sbjct: 433 KA-GFQTGYIAGNALLAMYGKCGSIEEAF 460
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 147/338 (43%), Gaps = 33/338 (9%)
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + + ++AY + + A+ VF+G+ V N+MISG+ +D + ++F+
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFE--- 115
Query: 198 RLGKTPDEYTLVG--LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYARCN 254
K PD + ++SG + LS + L + D VS + ++S +A+
Sbjct: 116 ---KMPDRDLISWNVMLSGYVKNGNLSAARA-----LFNQMPEKDVVSWNAMLSGFAQNG 167
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF-RKLNMQGKKADPVLIASVL 313
+ A +F+ + + ++W+ L++ Y Q G A F K++ + + ++ V
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A ++ ++ ++M++ Y++ G L ++FE + R++
Sbjct: 228 KKRLDDAR----SLFDRMPVRDKISWNIMITG-----YAQNGLLSEARRLFEELPIRDVF 278
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ +++ G +G +A F ++ EK +E +++A++ + RE+F +M
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQM 334
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
T + MV GN+++A +P+
Sbjct: 335 PSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+++ D+V W+ I+ Y ++G AL SV + + V
Sbjct: 53 STIVDSDIVKWNRKISAYMRKGQCESAL-------------------SVFNGMRRRSTVT 93
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDM-----------YSKCGYLGLGIQVFETMSERNI 372
A+I GY+ + F+ + V + D Y K G L +F M E+++
Sbjct: 94 YNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV 153
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++N+++ G +GF +A R I ++ L +E +++ LL A G + D R +F
Sbjct: 154 VSWNAMLSGFAQNGFVEEA----RKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
>gi|297735486|emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 249/498 (50%), Gaps = 33/498 (6%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+VF+WN++IR L + LR L+P+ T+ + +A ++
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH + +G S AL+ Y L+ + +VFD + P LVL +I + F
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+K+L+LF M +G TPD + ++S L V + +H F KS + +VSS
Sbjct: 173 PEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 246 LVSMYARCNCMNSAYH-----------VFNSLFHP--------------------DLVTW 274
L+S Y C ++ AY V+N++ H D+V+W
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSW 292
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+++I G+++ G Y +AL +F ++ G + + + S L+A A + GA IH YV +
Sbjct: 293 NSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDK 352
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ + S+L+DMYSKCG + +Q+FE + R++ T+ S++ GL +HG +A +
Sbjct: 353 NDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHY 412
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F + E + PD+ T +L AC H GL++ G F M + +G+ K EHY MV LLG
Sbjct: 413 FSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGCMVDLLG 472
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
G L+EAY I +P + + GA LS C ++ N +L E+ A +L DPR +VM
Sbjct: 473 RMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLDPRDPWARVM 532
Query: 515 LSNTYAEDGRWDDVMKLR 532
LSN YAE+ +WD M LR
Sbjct: 533 LSNMYAEEAKWDRSMGLR 550
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 31/337 (9%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S Q + +E+HA V + F + L+ Y ++ R +FD+ Q + LW
Sbjct: 103 SGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTL 162
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
IIRAY A LF+ + L PD + + AC DL + +H SG
Sbjct: 163 IIRAYVCVTFPEKALELFRTMREVGLTPDMVAISTVVSACGLLGDLGVAKAMHCFIEKSG 222
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIK-------------------------------VFD 163
+ D+ SS L++ Y + +D A + +F
Sbjct: 223 IEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQ 282
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D D+V NSMI GFA G + ++L F M G +P+ TL+ +S L
Sbjct: 283 SMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDT 342
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G IH + K+ + + S L+ MY++C ++ A +F DL TW++++ G +
Sbjct: 343 GAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAM 402
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
G KAL+YF K+ + D V + VL+A A +
Sbjct: 403 HGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAG 439
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 51 NNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI 110
+N L + LF P R V WNS+I +A ++ +A + F + + + P+ T
Sbjct: 271 HNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLST 330
Query: 111 TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDL 170
AC+ + L ++H + + RD S+L+ YSK ID+A+++F+ + DL
Sbjct: 331 LSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDL 390
Query: 171 VLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG----QG 226
S++ G A G +K+L F M PD+ T+VG++S LL G Q
Sbjct: 391 FTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQS 450
Query: 227 IHG-FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
+ F L + Y +V + R C+ AY + + + + W A ++
Sbjct: 451 MEKVFGLVPKVEHY----GCMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLS 501
>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g65570-like [Vitis vinifera]
Length = 751
Score = 272 bits (695), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 159/510 (31%), Positives = 271/510 (53%), Gaps = 2/510 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
KL+ Y + AR +FD+ P R + WNS+I +Y R +A +++ ++ +
Sbjct: 113 GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGI 172
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI-TSSALVTAYSKLSLIDEAI 159
PD FT++ + +A S+ + + HG ++V G+G ++ SALV Y+K + +A
Sbjct: 173 LPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFGKMRDAR 232
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
V D V D+VL ++I G++H G +SLQ+F M + G +EYTL ++
Sbjct: 233 LVSDQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLE 292
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
L+ G+ IHG +K+ +S + L++MY RC ++ + VF +P+ VTW+++I
Sbjct: 293 DLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIV 352
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G Q G AL FR++ + ++SVL A + A + G IH V++ G ++
Sbjct: 353 GLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDI 412
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
V +AL+D Y KCG + VF + E ++++ NS+I +GF ++A + F +
Sbjct: 413 DKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMK 472
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
+ GL P+ T+ +L AC + GL+ +G IF+ I+ +HY MV LLG AG L
Sbjct: 473 DTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRL 532
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
+EA I + D + LLS C I+G+ ++A+ V +++ + P G V+LSN Y
Sbjct: 533 KEAEMLINQVNIS-DVVIWRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLY 591
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A G W V++++ + + L+K +SWV
Sbjct: 592 ASTGNWSKVIEMKSAMREMRLKKNPAMSWV 621
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 179/379 (47%), Gaps = 7/379 (1%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSL--FKNLL 96
F + LV +YA + AR++ D+ + V L+ ++I Y+ H D +SL F+N+
Sbjct: 213 FVGSALVDMYAKFGKMRDARLVSDQVVGKDVVLFTALIVGYS--HHGEDGESLQVFRNMT 270
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ ++ + +T + + C DL R +HG + +GL + ++L+T Y + L+D
Sbjct: 271 KKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVD 330
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+++KVF +P+ V S+I G G + +L F MLR TP+ +TL ++
Sbjct: 331 DSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACS 390
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
++L G+ IH +K D YV + L+ Y +C A VFN L D+V+ ++
Sbjct: 391 SLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNS 450
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I Y+Q G +AL F + G + + V VL+A + + G I G
Sbjct: 451 MIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSG 510
Query: 337 -FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
EL+ + +VD+ + G L + ++ +++ + +++ +HG A
Sbjct: 511 NIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVM 570
Query: 396 RDIIEKGLNPDESTFSALL 414
+I+ L P++ LL
Sbjct: 571 NRVID--LAPEDGGTHVLL 587
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L+ + +H L+ KA L T L+ +Y ++ + +F + + W S+I
Sbjct: 292 EDLTSGRLIHGLIVKAGLESAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVI 351
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R A F+ +LR+ + P++FT + + RACS + L + +H + GL
Sbjct: 352 VGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +AL+ Y K + A VF+G+ + D+V NSMI +A GF ++LQLF M
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 471
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS---SVLVSMYARC 253
G P+ T +G++S LL +G H F + + + + +V + R
Sbjct: 472 KDTGLEPNNVTWLGVLSACNNAGLLE--EGCHIFSSARNSGNIELTKDHYACMVDLLGRA 529
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+ A + N + D+V W L++ GD
Sbjct: 530 GRLKEAEMLINQVNISDVVIWRTLLSACRIHGD 562
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 77/147 (52%), Gaps = 9/147 (6%)
Query: 289 KALYYFRKLNMQGKK-------ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
K+L +F + N++ +K L +S++ ++ I + ++ GF S+
Sbjct: 53 KSLSHFSQSNIKIRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRGFHHSL 112
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+ L+D Y KCG + +VF+ + R+I+ +NS+I +G + +A + ++ ++
Sbjct: 113 --GNKLIDAYLKCGSVVYARKVFDEVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPD 170
Query: 402 GLNPDESTFSALLCACCHGGLVNDGRE 428
G+ PDE TFS++ A GLV++G+
Sbjct: 171 GILPDEFTFSSVFKAFSDLGLVHEGQR 197
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S L + K++HA+V K L D + L+ Y AR +F+ +
Sbjct: 385 VLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGSTEIARSVFNGLLEVD 444
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V NS+I +YA ++A LF + T L+P+N T+ + AC+ L +
Sbjct: 445 VVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFS 504
Query: 129 GAIVSG---LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
A SG L +D + +V + + EA + + V+ D+V+ +++S
Sbjct: 505 SARNSGNIELTKDHY--ACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSA 556
>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15130 [Vitis vinifera]
gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 267/529 (50%), Gaps = 2/529 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA D L+ +Y + + A +FD+ +R+V W +++ Y
Sbjct: 25 QVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRMLERNVVSWTALMCGYLQEG 84
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ +L + + +KP+ FT++ +AC + +HG + SG S+ +
Sbjct: 85 NAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWVSVVGN 144
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A + YSK I A +VF+ + +LV N+MI+G H G KSL LF M G+ P
Sbjct: 145 ATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQGQGEVP 204
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF--DSYDYVSSVLVSMYARCNCMNSAYH 261
DE+T + + G IH + F + ++S +V +YA+C + A
Sbjct: 205 DEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGYLFEAQK 264
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+ + +L++WSALI G++Q+G+ +A+ FR+L D +++ ++ A A
Sbjct: 265 VFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMGVFADLAL 324
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G +H Y+++ L + V+++++DMY KCG ++F M RN++++ +I G
Sbjct: 325 VEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTEEAERLFSEMQVRNVVSWTVMITG 384
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G HG +A F + G+ DE + ALL AC H GL+ + +E F+R+ + ++
Sbjct: 385 YGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYFSRLCNNHQMKP 444
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY MV +LG AG L+EA + I ++ + + LLS C ++GN ++ V L
Sbjct: 445 NIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIWQTLLSACRVHGNLEIGREVGEIL 504
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
F D VM+SN YAE G W + ++R + GL+KEAG SWV
Sbjct: 505 FRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLVKAKGLKKEAGQSWVE 553
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 117/226 (51%)
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+ L L+ + L G +H + F +++ L+ MY +C+ ++ A VF
Sbjct: 3 ERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVF 62
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + ++V+W+AL+ GY Q+G+ +L ++ G K + ++ L A V
Sbjct: 63 DRMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVE 122
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IHG ++ GFE +V +A +DMYSKCG +G+ QVF M RN++++N++I G
Sbjct: 123 NGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNAMIAGHT 182
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
G ++ F+ + +G PDE TF++ L AC G + G +I
Sbjct: 183 HEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQI 228
>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1611
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 162/531 (30%), Positives = 275/531 (51%), Gaps = 7/531 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H +V ++ L + L+ +Y + AR +F + + + WN++I L+
Sbjct: 955 KQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLISWNTMISGCTLS 1014
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF----VHGGAIVSGLGRD 138
+ +F +LLR L PD FT A + RACS L G + +H A+ +G+ D
Sbjct: 1015 GLEECSVGMFVHLLRDSLLPDQFTVASVLRACSS---LEGGYYLATQIHACAMKAGVVLD 1071
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S S+AL+ YSK ++EA +F DL N+++ G+ G + K+L+L+ M
Sbjct: 1072 SFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFPKALRLYILMQE 1131
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G+ D+ TLV L G+ IH +K F+ +V+S ++ MY +C M S
Sbjct: 1132 SGERSDQITLVNAAKAAGGLVGLKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMES 1191
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + PD V W+ +I+G + G AL+ + ++ + + D A+++ A +
Sbjct: 1192 ARRVFSEIPSPDDVAWTTMISGCVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSL 1251
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH +++ V ++LVDMY+KCG + +F+ + R I ++N++
Sbjct: 1252 LTALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAM 1311
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I+GL HG +A +FF+ + +G+ PD TF +L AC H GLV++ E F M + YG
Sbjct: 1312 IVGLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYG 1371
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + EHY +V L AG +EEA I S+P ++ LL+ C + + + + VA
Sbjct: 1372 IEPEIEHYSCLVDALSRAGRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVA 1431
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L +P A V+LSN YA +W++V R+ + ++K+ G SWV
Sbjct: 1432 EKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKVNVKKDPGFSWV 1482
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 114/415 (27%), Positives = 190/415 (45%), Gaps = 32/415 (7%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP- 65
F +L + + LS K HA + + D F L+ +YA L SAR LFD TP
Sbjct: 660 FSILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPD 719
Query: 66 -QRSVFLWNSIIRAYAL-AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
R + WN+I+ A A A + +D LF+ L R+ + T A + + C ++
Sbjct: 720 TNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSAS 779
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+HG A+ GL D + ALV Y+K LI EA +FDG++ D+VL N M+ +
Sbjct: 780 ESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDT 839
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL-WEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+++ LF R G PD+ TL L + + ++L + Q F +Y
Sbjct: 840 CLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQ----------FKAY--- 886
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ + MY D++ W+ ++ + Q+G+ +A+ F +
Sbjct: 887 -ATKLFMYDDDG--------------SDVIVWNKALSRFLQRGEAWEAVDCFVDMINSRV 931
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D + +L A + G IHG V++ G + V V + L++MY K G +
Sbjct: 932 ACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARS 991
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
VF M+E ++I++N++I G L G + F ++ L PD+ T +++L AC
Sbjct: 992 VFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRAC 1046
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 211/487 (43%), Gaps = 34/487 (6%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S S ++ LH K L D F A LV +YA ++ AR+LFD R V LWN +++
Sbjct: 775 SPSASESLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMK 834
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY +A LF RT +PD+ T ++R ++ L+ A
Sbjct: 835 AYVDTCLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYA------- 887
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+KL + D+ DG D+++ N +S F G +++ F M+
Sbjct: 888 ------------TKLFMYDD-----DG---SDVIVWNKALSRFLQRGEAWEAVDCFVDMI 927
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
D T V +++ + + L +G+ IHG ++S D V + L++MY + ++
Sbjct: 928 NSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVS 987
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF + DL++W+ +I+G + G ++ F L D +ASVL A +
Sbjct: 988 RARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACS 1047
Query: 318 K-SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ IH ++ G L VS+AL+D+YSK G + +F ++ ++N
Sbjct: 1048 SLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWN 1107
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV--NDGREIFTRMT 434
+++ G + G +A + + E G D+ T + A GGLV G++I +
Sbjct: 1108 AIMHGYIVSGDFPKALRLYILMQESGERSDQITL--VNAAKAAGGLVGLKQGKQIHAVVV 1165
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+ G ++ + G +E A +P P D A + ++S C G + A
Sbjct: 1166 KR-GFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWT-TMISGCVENGQEEHA 1223
Query: 495 EIVAHQL 501
HQ+
Sbjct: 1224 LFTYHQM 1230
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 12/312 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K++HA+V K D F + ++ +Y + SAR +F + P W ++I
Sbjct: 1154 LKQGKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISG 1213
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ A + + ++++PD +T+A + +ACS + L R +H + D
Sbjct: 1214 CVENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFD 1273
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++LV Y+K I++A +F + + N+MI G A G ++LQ F +M
Sbjct: 1274 PFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKS 1333
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
G PD T +G++S L+S + ++ + Y S LV +R
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHY----SCLVDALSRA 1389
Query: 254 NCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNM--QGKKADPVLIA 310
+ A V +S+ F + L+ Q D KL A VL++
Sbjct: 1390 GRIEEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLS 1449
Query: 311 SVLAAAAKSANV 322
+V AAA + NV
Sbjct: 1450 NVYAAANQWENV 1461
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 3/147 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +++HA + K + DPF T LV +YA + AR LF +T R + WN++I
Sbjct: 1254 ALEQGRQIHANIVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIV 1313
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A +A FK + + PD T+ + ACS +S L + + ++ G
Sbjct: 1314 GLAQHGNAKEALQFFKYMKSRGVMPDRVTFIGVLSACS-HSGLVSEAYENFYSMQKNYGI 1372
Query: 138 DSITS--SALVTAYSKLSLIDEAIKVF 162
+ S LV A S+ I+EA KV
Sbjct: 1373 EPEIEHYSCLVDALSRAGRIEEAEKVI 1399
>gi|357481329|ref|XP_003610950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512285|gb|AES93908.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 831
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 276/543 (50%), Gaps = 39/543 (7%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
F V + S+ + ++ K++H L K RD L+ +YA + SA +F+ +
Sbjct: 255 FGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDK 314
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
SV WN +I Y +R + K+L F+ + +PD+ TY + AC ++ D+
Sbjct: 315 HSVVSWNIMISGYG--NRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVK--- 369
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+GR ++FD +S P L+ N+++SG+
Sbjct: 370 ----------VGR----------------------QIFDCMSSPSLISWNAILSGYNQSA 397
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++++LF M + PD TL ++S E LL G+ +H K F YV+S
Sbjct: 398 DHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVAS 457
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+++Y++C M + HVF+ L D+V W+++I G+S AL F+++ G
Sbjct: 458 SLINVYSKCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDALACFKRMRQFGFFP 517
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
A++ ++ AK ++++ G IH +I+ G+ +V V S+LV+MY KCG +G F
Sbjct: 518 SEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGDVGAARYYF 577
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ M +NI+T+N +I G +G+ +A ++D+I G PD+ TF A+L AC H LV+
Sbjct: 578 DMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDITFVAVLTACSHSALVD 637
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+G EIF+ M +++ + K +HY ++ LG G E + ++P D V +LS
Sbjct: 638 EGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTMPYKDDTIVWEVVLSS 697
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C ++ N LA+ A +L +PR A V+L+N Y+ GRWDD +RD + DN + K+
Sbjct: 698 CRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQVVRDLMSDNQIHKDP 757
Query: 545 GVS 547
G S
Sbjct: 758 GYS 760
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 122/465 (26%), Positives = 217/465 (46%), Gaps = 79/465 (16%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ +++SLS K +HA + + +L D F L+ LY+ N + SA +FDK P ++
Sbjct: 11 LLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKN 70
Query: 69 VFLWNSIIRAYALAHRFNDAKSLF-------------------KN-------------LL 96
+F +N+I+ A+ ++ A LF KN ++
Sbjct: 71 IFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMV 130
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+KP + T+A + AC D+ R HG + G + S+AL+ Y+K L +
Sbjct: 131 YESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNE 190
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV------- 209
+A +VF+G+ +P+ V +M+ G + + L+LF MLR G D +L
Sbjct: 191 DAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICA 250
Query: 210 -GLISGLWEPSL-LSV---GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
G+ G+ + S LS G+ IH +K F+ ++ + L+ MYA+ M+SA +VF
Sbjct: 251 KGVSFGVCDDSRGLSTNAQGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFE 310
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+L +V+W+ +I+GY + D KAL F+++ G + D V ++L A KS +V
Sbjct: 311 NLDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDV-- 368
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
+G Q+F+ MS ++I++N+++ G
Sbjct: 369 ---------------------------------KVGRQIFDCMSSPSLISWNAILSGYNQ 395
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+A E FR + + NPD +T + +L +C GL+ G+++
Sbjct: 396 SADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQV 440
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 200/423 (47%), Gaps = 47/423 (11%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
H LV K + + + L+ +Y + A +F+ + + + +++ + ++
Sbjct: 161 HGLVLKVGFDSNIYVSNALLCMYTKCGLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQV 220
Query: 86 NDAKSLFKNLLRTQLKPDNFTYACITRACSEN------SDLPGL------RFVHGGAIVS 133
+ LF+ +LR + D+ + + I C++ D GL + +H A+
Sbjct: 221 KEGLELFRLMLRKGICVDSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLAVKH 280
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G RD ++L+ Y+K +D A VF+ + +V N MISG+ + +K+L+ F
Sbjct: 281 GFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGNRCDSEKALECF 340
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M G PD+ T + +++ + + VG+ I FD
Sbjct: 341 QRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQI--------FD---------------- 376
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
CM+S P L++W+A+++GY+Q D+G+A+ FRK+ Q + D +A +L
Sbjct: 377 -CMSS----------PSLISWNAILSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIIL 425
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
++ A+ + G +H + GF V V+S+L+++YSKCG + + VF +SE +++
Sbjct: 426 SSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYSKCGKMEVSKHVFSKLSELDVV 485
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+NS+I G ++ A F+ + + G P E +F+ + +C + G++I ++
Sbjct: 486 CWNSMIAGFSINSLEQDALACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQI 545
Query: 434 TEE 436
++
Sbjct: 546 IKD 548
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 46/368 (12%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
++C N L + +H L D+ + L+ YSK + I A VFD + ++
Sbjct: 13 QSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKIPHKNIF 72
Query: 172 LCNSMISGFAHC-------------------------------GFWDKSLQLFDWMLRLG 200
N+++S F G+ ++L +D M+
Sbjct: 73 SYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYDLMMVYE 132
Query: 201 KT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
P T + S ++ G+ HG LK FDS YVS+ L+ MY +C A
Sbjct: 133 SVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGLNEDA 192
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK- 318
+ VF + P+ VT++ ++ G SQ + L FR + +G D V ++++L AK
Sbjct: 193 FRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTILVICAKG 252
Query: 319 ------------SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
S N G IH ++HGFE + + ++L+DMY+K G + VFE
Sbjct: 253 VSFGVCDDSRGLSTNA-QGKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFEN 311
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ + +++++N +I G G + +A E F+ + G PD+ T+ +L AC G V G
Sbjct: 312 LDKHSVVSWNIMISGYGNRCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVG 371
Query: 427 REIFTRMT 434
R+IF M+
Sbjct: 372 RQIFDCMS 379
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 35/260 (13%)
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
L+ L+ LS + IH + + S ++ + L+ +Y++CN + SA+HVF+ +
Sbjct: 7 NLINLLQSCITNKSLSSAKIIHARIFRFTLFSDTFLCNHLIDLYSKCNQITSAHHVFDKI 66
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK------------------------ 302
H ++ +++A+++ + + + A F ++ +
Sbjct: 67 PHKNIFSYNAILSAFCKSNNLQYACRLFLQMPERNTVSLNTIITTMVKNGYERQALDTYD 126
Query: 303 --------KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
K + A+V +A +V G HG V++ GF+ ++ VS+AL+ MY+KC
Sbjct: 127 LMMVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKC 186
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G +VFE + E N +T+ +++ GL + E FR ++ KG+ D + S +L
Sbjct: 187 GLNEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLMLRKGICVDSVSLSTIL 246
Query: 415 CACCHG---GLVNDGREIFT 431
C G G+ +D R + T
Sbjct: 247 VICAKGVSFGVCDDSRGLST 266
>gi|212723118|ref|NP_001131685.1| hypothetical protein [Zea mays]
gi|194692242|gb|ACF80205.1| unknown [Zea mays]
gi|414879040|tpg|DAA56171.1| TPA: hypothetical protein ZEAMMB73_730680 [Zea mays]
Length = 590
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 181/541 (33%), Positives = 282/541 (52%), Gaps = 32/541 (5%)
Query: 26 HALVAKASLLRDPFYATKLVRL-----YALNNVLPSAR----ILFDKTP---QRSVFLWN 73
HAL A LL A +RL AL +V PSA ++F + P R F WN
Sbjct: 25 HALQCHALLLTSGHLAASPLRLSNHLLLALASV-PSAAALADVVFARLPLPAARDPFAWN 83
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR---FVHGGA 130
+ IR +A A R A F + R ++PD +T+ + +AC PG R VH A
Sbjct: 84 TAIRLHAPA-RPRAALLYFARMRRCGVRPDAYTFPAVLKACGCA---PGCRAGLLVHAEA 139
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD---GVSDPDLVLCNSMISGFAHCGFWD 187
+ GL D T +AL++ Y ++ I KVFD GVS DLV NSM++G+ CG
Sbjct: 140 VRRGLAADLFTVNALISFYCRILDIRSGRKVFDEAGGVSR-DLVSWNSMVAGYVGCGEMG 198
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVL 246
+ ++FD M D ++ LI G + V + F D V + +
Sbjct: 199 LAQEMFDEM----PQKDTFSWATLIDGYGKQGGAGVDRARELF---DQMPERDLVCWNSM 251
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ YAR M+ A +F + ++++WS +I G+ G+ +AL YF+ + G + D
Sbjct: 252 IDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVSCGEAKEALEYFQSMLRCGLRPDR 311
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ ++A A+ + G +H Y+ + V+V +AL+DMY KCG L L + +FE+
Sbjct: 312 IAAVGAVSACAQLGALEQGRWLHSYLEKKKLLSDVVVQTALIDMYVKCGCLDLAMLIFES 371
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M+ER+++T+N +I+GLG HGF A F + + + D+ + +L AC H GLV++G
Sbjct: 372 MAERSVVTWNVMIVGLGTHGFGLDAVTLFHRMEAESVAVDDLSVLGMLTACTHAGLVSEG 431
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
EIF RM +++GI K EHY +V LLG AG L++A I ++P P + G+LL+ C
Sbjct: 432 LEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSLLAACR 491
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+ +LAE+ +L + V+LSN YA++G W DV+++R + D G+RK+ G
Sbjct: 492 SHSCVELAELSVERLADLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMRKDIGR 551
Query: 547 S 547
S
Sbjct: 552 S 552
>gi|297800176|ref|XP_002867972.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313808|gb|EFH44231.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 535
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/546 (29%), Positives = 275/546 (50%), Gaps = 43/546 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTP 65
+L ++ +SL ++ HA + K L D F A+KLV A N + A + ++
Sbjct: 12 ILSFTERAKSLLEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIE 71
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ F NS+IRAYA + A ++F+ +L + PD +++ + +AC+ R
Sbjct: 72 SPNGFTHNSVIRAYANSSTPEIALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 131
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG + S L D + L+ Y + + A KV D + D V NS++S + G
Sbjct: 132 IHGLFMKSDLVTDVFVENTLINVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLDKGL 191
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++ LFD M + + +S+++
Sbjct: 192 VEEARALFDEME-----------------------------------ERNVESWNF---- 212
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKA 304
++S YA + A VF+S+ D+V+W+A++T Y+ G Y + L F L+ ++
Sbjct: 213 MISGYAAAGLVKEAREVFDSMPVKDVVSWNAMVTAYAHVGCYNEVLEVFNMMLDDSAERP 272
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + +VL+A A ++ G +H Y+ +HG E+ V++ALVDMYSKCG + ++VF
Sbjct: 273 DGFTLVNVLSACASLGSLSQGEWVHVYIDKHGIEIEGFVATALVDMYSKCGKIDKALEVF 332
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
S+R++ T+NS+I GL +HG A E F +++ +G P+ TF +L AC H GL++
Sbjct: 333 RDTSKRDVSTWNSIITGLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGLLD 392
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
R++F M YGI+ EHY MV LLG G EEA + +P + +LL
Sbjct: 393 QARKLFEMMNSVYGIEPTIEHYGCMVDLLGRMGKFEEAEELVNEVPADEASILLESLLGA 452
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C +G + AE +A++L E++PR+ + V +SN YA GRWD+ M++R + ++K
Sbjct: 453 CKRFGKLEQAERIANRLLESNPRESSGYVQMSNLYASHGRWDEAMEVRGKMRAERVKKNP 512
Query: 545 GVSWVS 550
G S +
Sbjct: 513 GCSMIE 518
>gi|223635620|sp|O49680.2|PP324_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g19220, mitochondrial; Flags: Precursor
Length = 951
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 165/512 (32%), Positives = 274/512 (53%), Gaps = 10/512 (1%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
++ +Y + A +LF T R + WNS+I A++ + AK+LFK ++ ++
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCS 493
Query: 104 NF---TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
F T I +C + L + VH G G + +++++++ Y + A
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGFGDNMLSANSVINMYIGCRDLTSAFL 553
Query: 161 VFDGVSDP-DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEP 218
+ +S+ DL NS+ISG A G +SL+ F M R GK D TL+G IS
Sbjct: 554 RLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNL 613
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
L+ G+ HG +KS + + + L++MY RC + SA VF + P+L +W+ +I
Sbjct: 614 GLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVI 673
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+ SQ + FR L ++ + + +L+A+ + + G H ++I+ GF+
Sbjct: 674 SALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQ 730
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ VS+ALVDMYS CG L G++VF +I +NSVI G HG +A E F+++
Sbjct: 731 ANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKEL 790
Query: 399 IEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ P++S+F +LL AC H G +++G + +M E++G++ TEH +++V +LG AG
Sbjct: 791 SSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAG 850
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L EAY FI + +P V GALLS C+ +G++ L + VA LFE +P +Y + L+N
Sbjct: 851 KLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLAN 910
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
TY G W++ ++LR + DN L+K G S +
Sbjct: 911 TYVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 942
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 189/383 (49%), Gaps = 4/383 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H K LL+D ++KL+ Y L S+ LFD+ ++ V +WNS+I A
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R+ A LF ++ + D+ T A S +H AI +GL DS
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K + A VF + D+V N++++ G KSLQ F M G+
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYARCNCMNSAY 260
D T +IS L++G+ +HG +KS + +VS + ++SMY++C +A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKS 319
VF L D+++ +A++ G++ G + +A ++ K + D + S+ +
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 320 ANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +HGY ++ + + V ++++DMY KCG +F+T + R+++++NS+
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 379 ILGLGLHGFTYQAFEFFRDIIEK 401
I +GFT++A F++++ +
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSE 489
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 158/310 (50%), Gaps = 5/310 (1%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R VH A+ GL +D TSS L+T Y + + + +FD + + D+++ NSMI+
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G + ++ LF M+ G D TL+ S L L +H +++ +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+++YA+ ++SA VF + H D+V+W+ ++T G K+L YF+ + G++
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF--ELSVMVSSALVDMYSKCGYLGLGI 361
AD V + V++A + + G +HG VI+ G+ E V V ++++ MYSKCG
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI--IEKGLNPDESTFSALLCACCH 419
VFE + R++I+ N+++ G +G +AF + ++K + PD +T ++ C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK-IQPDIATVVSITSICGD 405
Query: 420 GGLVNDGREI 429
+GR +
Sbjct: 406 LSFSREGRAV 415
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 16/270 (5%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
H L K+ D L+ +Y + SA +F ++ WN +I A +
Sbjct: 622 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 681
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ LF+NL +L+P+ T+ + A ++ S G++ H I G + S+
Sbjct: 682 GREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQ-AHCHLIRRGFQANPFVSA 737
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-T 202
ALV YS +++ +KVF + NS+IS G +K+++LF + +
Sbjct: 738 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 797
Query: 203 PDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
P++ + + L+S + G Q F +K + ++ V M R +
Sbjct: 798 PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI----VDMLGRAGKLR 853
Query: 258 SAYHVFNSLFHPDLV-TWSALITGYSQQGD 286
AY + P W AL++ + GD
Sbjct: 854 EAYEFITGIGEPQKAGVWGALLSACNYHGD 883
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 12 LSKSHQ--SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
LS S Q S S + H + + +PF + LV +Y+ +L + +F + S+
Sbjct: 705 LSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSI 764
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITRACS 115
WNS+I A+ A LFK L ++++P+ ++ + ACS
Sbjct: 765 SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACS 811
>gi|302142318|emb|CBI19521.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 169/556 (30%), Positives = 275/556 (49%), Gaps = 45/556 (8%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ T + Y + A+ LF++ P+R V WN++I Y+ DA +F +LR
Sbjct: 194 YLTTAFLDFYGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLRE 253
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS----- 153
P T + +C + + +HG I SGL D +AL + Y+K S
Sbjct: 254 GFPPCQRTLVGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKFSWNTMI 313
Query: 154 -------LIDEAIKVFDGVSDP---------------------------------DLVLC 173
L DEA+ VF + +LV
Sbjct: 314 GAYGQNGLFDEAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIESAGLLYNLMPQRNLVSL 373
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
+MISG+A G ++ F ML+L PD +V ++ G +P+ + G GIH + LK
Sbjct: 374 TAMISGYAEKGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLK 433
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ + V + L+SMY++ + + + +F+ + L++W+++I+ Q G A+
Sbjct: 434 TGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMEL 493
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F ++ M G D + IAS+LA ++ + G +H YV+++ ++ + +ALVDMY K
Sbjct: 494 FCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIK 553
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG L +VF+++ E + T+N++I G GL G ++A + ++ E+GL PD TF +
Sbjct: 554 CGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPDRITFLGV 613
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV 473
L AC HGGLV +G+ F M E++G+ +H MV LL AG LEEA F+ ++
Sbjct: 614 LSACTHGGLVWEGKRYFRSMREDFGMIPGLQHNACMVDLLSRAGFLEEAVIFVKNMEVEP 673
Query: 474 DPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
D A+ GALL+ C I+ L E +A +L D G V++SN YA GRWDDV ++R
Sbjct: 674 DSAIWGALLTSCCIHQELKLGECLAKRLLLLDYYSGGLYVLMSNLYASKGRWDDVARVRK 733
Query: 534 DIVDNGLRKEAGVSWV 549
+ D G +G+S +
Sbjct: 734 MMKDTGGDGSSGISLI 749
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 212/495 (42%), Gaps = 78/495 (15%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
+ T L R+ L +LPS P SVF +S+ ++ + A F+ LL +
Sbjct: 93 YVRTTLPRI-GLEFILPS-------IPNISVF--HSLFKSCSETKDSRWAFITFRRLLES 142
Query: 99 QLKPDNFTYACITRACSENS------DLPGLRF----VHGGAIVSGLGRDSITSSALVTA 148
+KP + T++ + +A ++ D P + + SG + ++A +
Sbjct: 143 NVKPSDLTFSLLIKAYVADASSSTVIDSPNTKIEANQIQTHLRKSGFNQYVYLTTAFLDF 202
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y KL I A +F+ + D+V N++I G++ G+ +L++F MLR G P + TL
Sbjct: 203 YGKLGCIYYAQHLFEEMPRRDVVSWNALICGYSRNGYDYDALEVFVQMLREGFPPCQRTL 262
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR---------------- 252
VGL+ P ++ G+ IHGF +KS D V + L SMYA+
Sbjct: 263 VGLVPSCGRPDIIFQGKAIHGFGIKSGLDLDCRVKNALTSMYAKFSWNTMIGAYGQNGLF 322
Query: 253 -----------------------------CNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
C + SA ++N + +LV+ +A+I+GY++
Sbjct: 323 DEAMLVFKQMQKERVEVNYVTIIMCSYAGCGNIESAGLLYNLMPQRNLVSLTAMISGYAE 382
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
+G+ G + F ++ K D V + S+L + G IH Y ++ G +V
Sbjct: 383 KGNMGLVVECFTQMLQLKMKPDAVAMVSILHGFTDPTFIGSGLGIHAYGLKTGLCADCLV 442
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
+ L+ MYSK G + +F M E+ +I++NSVI G T A E F + G
Sbjct: 443 VNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGRTSDAMELFCQMRMYGH 502
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRM------TEEYGIQAKTEHYIYMVKLLGLAG 457
+PD T ++LL C G + G + + E++ A + YI G
Sbjct: 503 SPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETALVDMYIK-------CG 555
Query: 458 NLEEAYSFIWSLPKP 472
LE A S+ +P
Sbjct: 556 RLESAERVFKSIKEP 570
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 112/261 (42%), Gaps = 10/261 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K L D L+ +Y+ + + LF + ++ + WNS+I A R
Sbjct: 427 IHAYGLKTGLCADCLVVNGLISMYSKFGDIETVFSLFSEMGEKQLISWNSVISACIQVGR 486
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+DA LF + PD T A + CSE L +H + + L + +A
Sbjct: 487 TSDAMELFCQMRMYGHSPDAITIASLLAGCSEVGFLQFGERLHNYVLRNNLDMEDFLETA 546
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y K ++ A +VF + +P L N+MISG+ G ++L + M G PD
Sbjct: 547 LVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLSGHEHRALSCYSEMQEQGLKPD 606
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-----SSVLVSMYARCNCMNSA 259
T +G++S L+ G+ +S + + + ++ +V + +R + A
Sbjct: 607 RITFLGVLSACTHGGLVWEGKRY----FRSMREDFGMIPGLQHNACMVDLLSRAGFLEEA 662
Query: 260 Y-HVFNSLFHPDLVTWSALIT 279
V N PD W AL+T
Sbjct: 663 VIFVKNMEVEPDSAIWGALLT 683
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 11/112 (9%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ LH V + +L + F T LV +Y L SA +F + + WN++I Y L+
Sbjct: 526 ERLHNYVLRNNLDMEDFLETALVDMYIKCGRLESAERVFKSIKEPCLATWNTMISGYGLS 585
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+ A S + + LKPD T+ + AC+ HGG + G
Sbjct: 586 GHEHRALSCYSEMQEQGLKPDRITFLGVLSACT-----------HGGLVWEG 626
>gi|359485688|ref|XP_002275048.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
gi|297739328|emb|CBI28979.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 271 bits (694), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 285/548 (52%), Gaps = 10/548 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQR 67
+L L + ++ S+ ++HA + +L+ D F A++L+ + + A ++F + Q
Sbjct: 14 LLSLLQKSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ F+ N++++ Y + A + + R L DN+TY + +AC L V
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRRKGLLGDNYTYPFVLKACGAMCGLLEGGLVQ 133
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G A+ G G D + L++ Y + A VFDG S+ DLV NSM+ G+ CG +
Sbjct: 134 GEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEME 193
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVL 246
+ +FD M D + +I G + +G+ S + D VS + +
Sbjct: 194 NAQNMFDEM----PERDVVSWSIMIDGYGK----KMGEVNRARVFFDSMPTRDLVSWNSM 245
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ YA+ M A +F+ + ++++WS +I GY+Q D +AL FR++ QG K D
Sbjct: 246 IDGYAKVGEMEVAREIFDKMLQKNVISWSIMIDGYAQHRDSKEALNLFRQMLCQGIKPDR 305
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + ++A ++ + G IH Y+ ++ L ++V +ALVDMY KCG ++F +
Sbjct: 306 VSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSRDEARRIFNS 365
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M ERN++++N +I+GLG++GF +A E F + + + D+ F +L AC H LV +G
Sbjct: 366 MPERNVVSWNVMIVGLGMNGFGKEALECFTQMEMERIPMDDLLFLGVLMACSHANLVTEG 425
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
IF +M Y ++ K EHY +V LLG AG L++ + I S+P + A+ G+LL C
Sbjct: 426 LHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACR 485
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
I+ N LAEIV +L E V++SN YA+ G W+ ++++R + + ++K+ G
Sbjct: 486 IHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGR 545
Query: 547 SWVSGSSN 554
S + N
Sbjct: 546 SVIEVDGN 553
>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/536 (31%), Positives = 281/536 (52%), Gaps = 10/536 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
++ + ++H +V K+ L F +V +Y+ + ++ A+ +FD R+ WNS+I
Sbjct: 208 AVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIA 267
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ +A LF + +K +A + + C+ ++ + +H I +G
Sbjct: 268 GFVTNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDF 327
Query: 138 DSITSSALVTAYSKLSLIDEAIKVF---DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D +AL+ AYSK S ID+A K+F GV + +V ++ISG+ G D+++ LF
Sbjct: 328 DLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQN--VVSWTAIISGYVQNGRTDRAMNLFC 385
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M R G P+ +T +++ + +S Q IH +K+++++ V + L Y++
Sbjct: 386 QMRREGVRPNHFTYSTILTA---NAAVSPSQ-IHALVVKTNYENSPSVGTALSDSYSKIG 441
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL- 313
N A +F + D+V WSA+++GY+Q GD A+ F +L +G + + +SVL
Sbjct: 442 DANEAAKIFELIDEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLN 501
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A AA +A+V G H I+ GF ++ VSSALV MY+K G + +VF+ +R+++
Sbjct: 502 ACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLV 561
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++NS+I G HG ++ + F ++ K L D TF ++ AC H GLVN+G+ F M
Sbjct: 562 SWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLM 621
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
++Y I EHY MV L AG LE+A I +P P + LL+ C ++ N L
Sbjct: 622 VKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQL 681
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E+ A +L P+ A V+LSN YA G W + K+R + ++KEAG SW+
Sbjct: 682 GELAAEKLISLQPQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWI 737
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 196/397 (49%), Gaps = 7/397 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H K + D T LV +Y + +FD+ ++V W S++ Y
Sbjct: 112 KQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAGYRQN 171
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A LF + +KP+ FT+A + + + + VH I SGL
Sbjct: 172 GLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVG 231
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+++V YSK ++ +A VFD + + + V NSMI+GF G ++ +LF M G
Sbjct: 232 NSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRLEGVK 291
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+ +I +S + +H +K+ D + + L+ Y++C+ ++ A+ +
Sbjct: 292 LTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKL 351
Query: 263 FNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
F + H ++V+W+A+I+GY Q G +A+ F ++ +G + + +++L A +A
Sbjct: 352 F-CMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA---NA 407
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
V P + IH V++ +E S V +AL D YSK G ++FE + E++I+ +++++
Sbjct: 408 AVSP-SQIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELIDEKDIVAWSAMLS 466
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G G A + F + ++G+ P+E TFS++L AC
Sbjct: 467 GYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNAC 503
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 184/358 (51%), Gaps = 1/358 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
LFD+TPQ+ + N ++ ++ + +A +LF L R+ D + +C+ + C D
Sbjct: 48 LFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFD 107
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ VH I G D ++LV Y K +++ +VFD + ++V S+++G
Sbjct: 108 RIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLAG 167
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G +++L+LF M G P+ +T ++ GL + G +H +KS DS
Sbjct: 168 YRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDST 227
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+V + +V+MY++ ++ A VF+S+ + + V+W+++I G+ G +A F ++ +
Sbjct: 228 IFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMRL 287
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+G K + A+V+ A + +H VI++G + + + +AL+ YSKC +
Sbjct: 288 EGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDD 347
Query: 360 GIQVFETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
++F M +N++++ ++I G +G T +A F + +G+ P+ T+S +L A
Sbjct: 348 AFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREGVRPNHFTYSTILTA 405
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 130/260 (50%)
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
++FD L N ++ F+ ++L LF + R G D +L ++
Sbjct: 47 QLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGCLF 106
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
VG+ +H C+K F V + LV MY + + VF+ + ++V+W++L+
Sbjct: 107 DRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSLLA 166
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
GY Q G +AL F ++ ++G K +P A+VL A V G +H VI+ G +
Sbjct: 167 GYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDS 226
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
++ V +++V+MYSK + VF++M RN +++NS+I G +G +AFE F +
Sbjct: 227 TIFVGNSMVNMYSKSLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFELFYRMR 286
Query: 400 EKGLNPDESTFSALLCACCH 419
+G+ ++ F+ ++ C +
Sbjct: 287 LEGVKLTQTIFATVIKLCAN 306
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 81/173 (46%)
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
+ +F+ L + L+ +S+ +AL F L G D ++ VL
Sbjct: 45 SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +H I+ GF V V ++LVDMY K + G +VF+ M +N++++ S+
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEMRVKNVVSWTSL 164
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ G +G QA + F + +G+ P+ TF+A+L G V G ++ T
Sbjct: 165 LAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHT 217
>gi|242059059|ref|XP_002458675.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
gi|241930650|gb|EES03795.1| hypothetical protein SORBIDRAFT_03g037910 [Sorghum bicolor]
Length = 894
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 170/579 (29%), Positives = 287/579 (49%), Gaps = 32/579 (5%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQ 66
L L +++S + K+LHA + + L + +K++R YAL L A +F++
Sbjct: 313 LALVVTRSFVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIES 372
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+ FLWN+++R A + DA +K +KPDN T+ + +AC++ +
Sbjct: 373 PTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQM 432
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H I G D S++L+ Y+ + A +FD + D+V NS+I G++ +
Sbjct: 433 HSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRF 492
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ L LF+ M D+ T+V +IS S+ + + ++ + Y+ + L
Sbjct: 493 KEVLALFELMQAEEVQADKVTMVKVISACTHLGDWSMADCMVRYIERNHIEVDVYLGNTL 552
Query: 247 VSMYARCNCMNSAYHVF-----------NSLFH--------------------PDLVTWS 275
+ Y R + SA VF N++ H DL++WS
Sbjct: 553 IDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAYAKGGNLVSAKKIFDQIPNKDLISWS 612
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
++I YSQ + +L FR++ K D V+IASVL+A A + G IH YV ++
Sbjct: 613 SMICAYSQASHFSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRN 672
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
+ ++ ++L+DM++KCG + +QVF M E++ +++NS+ILGL +GF +A F
Sbjct: 673 NIKTDTIMENSLIDMFAKCGCMQEALQVFTEMEEKDTLSWNSIILGLANNGFEDEALNIF 732
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
++ +G P+E TF +L AC + LV +G + F RM + ++ + +HY +V +L
Sbjct: 733 YSMLTEGPRPNEVTFLGVLIACANKRLVQEGLDHFERMKTVHNLEPQMKHYGCVVGILSR 792
Query: 456 AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
AG LE+A +FI +P DP V LL C +GN +AE+ +L E DP ++L
Sbjct: 793 AGQLEKAKNFINEMPLAPDPVVWRILLGACKTHGNVAVAEVATKKLSELDPSNSGDYMLL 852
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
SN YA RW D + +R + D +RK S V +S+
Sbjct: 853 SNIYASADRWSDALNVRQWMADTAVRKSPACSVVDSASS 891
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 163/311 (52%), Gaps = 1/311 (0%)
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+V+++ +A + A +F+ + ++V+W+ LI GY++ Y +A+ FR + G
Sbjct: 10 NVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGIS 69
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ + +V+ A + + G ++HGY ++ G V ++L+D+Y+K G + ++V
Sbjct: 70 PSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKV 129
Query: 364 F-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
F E + RN++++ S+I G +HG + +A E F ++ G+ P+ TF +++ AC HGGL
Sbjct: 130 FDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGL 189
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V G F M EY I + +H+ ++ +LG AG L EA I LP V+ V LL
Sbjct: 190 VEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILL 249
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
CC YG ++ + + + + G +LSN E GR+ D + R + + + K
Sbjct: 250 GCCSKYGEVEMGKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVK 309
Query: 543 EAGVSWVSGSS 553
G++ V S
Sbjct: 310 VPGLALVVTRS 320
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 162/351 (46%), Gaps = 8/351 (2%)
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
RF+DA+ K L ++ +TR+ + ++ +H +VSGL S
Sbjct: 291 RFSDAEQARKLLDERKIVKVPGLALVVTRSFVM---MEAVKKLHAHLVVSGLHNCQYAMS 347
Query: 144 ALVTAYS-KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++ +Y+ + S + A KVF+ + P L N+++ G A ++ + G
Sbjct: 348 KVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQSDAPKDAIVFYKKAQEKGMK 407
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T ++ + G+ +H +K F +VS+ L+ +YA C + A +
Sbjct: 408 PDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFVSNSLIHLYAACGDLVCARSI 467
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D+V+W++LI GYSQ+ + + L F + + +AD V + V++A +
Sbjct: 468 FDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEVQADKVTMVKVISACTHLGDW 527
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
+ Y+ ++ E+ V + + L+D Y + G L +VF M ++N +T N++I
Sbjct: 528 SMADCMVRYIERNHIEVDVYLGNTLIDYYCRIGQLQSAEKVFSQMKDKNTVTLNAMIHAY 587
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G A + F I N D ++S+++CA +D E+F +M
Sbjct: 588 AKGGNLVSAKKIFDQIP----NKDLISWSSMICAYSQASHFSDSLELFRQM 634
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 188/438 (42%), Gaps = 47/438 (10%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LH K ++ D L+ LYA + +V S ++ + +R++ W SII +A+
Sbjct: 94 LHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHG 153
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFV--------------HG 128
+A LF + R ++P+ T+ + ACS + GL F H
Sbjct: 154 LSVEALELFAEMRRAGIRPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHF 213
Query: 129 GAIVSGLGRDSITSSA---------------------LVTAYSKLSLIDEAIKVFDGV-- 165
G I+ LGR A + Y ++ + AIK+ +
Sbjct: 214 GCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEMGKRAIKMISDLER 273
Query: 166 -SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
S D + +++++ +++ +L D ++ K P LV S + ++
Sbjct: 274 ESGGDFAVLSNVLNELGRFSDAEQARKLLDER-KIVKVPG-LALVVTRSFV----MMEAV 327
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYA-RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
+ +H + S + Y S ++ YA + + + A+ VF + P W+ L+ G +Q
Sbjct: 328 KKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNTLLRGLAQ 387
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
A+ +++K +G K D + VL A AK+ G +H +VI+ GF L + V
Sbjct: 388 SDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIKLGFLLDIFV 447
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S++L+ +Y+ CG L +F+ M ++++++NS+I G + F + + +
Sbjct: 448 SNSLIHLYAACGDLVCARSIFDEMLVKDVVSWNSLIGGYSQRNRFKEVLALFELMQAEEV 507
Query: 404 NPDESTFSALLCACCHGG 421
D+ T ++ AC H G
Sbjct: 508 QADKVTMVKVISACTHLG 525
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 176/418 (42%), Gaps = 43/418 (10%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR+LFD+ P R+V W +I Y A + +A +LF++++ + P T + A S
Sbjct: 25 ARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHMMAGGISPSEITVLAVVPAISN 84
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNS 175
+ +HG + G+ D+ ++L+ Y+K+ + ++KVFD + D +LV S
Sbjct: 85 LGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTS 144
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
+ISGFA G ++L+LF M R G P+ T + +I+ L V QG+ F KS
Sbjct: 145 IISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINACSHGGL--VEQGLAFF--KSM 200
Query: 236 FDSYDYVSSV-----LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQG--DY 287
Y+ + ++ M R + A + L +++ W L+ S+ G +
Sbjct: 201 VYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVIVWRILLGCCSKYGEVEM 260
Query: 288 GK-------------------------ALYYFRKLNMQGKKADPVLIASV--LAAAAKSA 320
GK L F K D I V LA +
Sbjct: 261 GKRAIKMISDLERESGGDFAVLSNVLNELGRFSDAEQARKLLDERKIVKVPGLALVVTRS 320
Query: 321 NVWPGAV--IHGYVIQHGFELSVMVSSALVDMYS-KCGYLGLGIQVFETMSERNIITYNS 377
V AV +H +++ G S ++ Y+ + L +VFE + +N+
Sbjct: 321 FVMMEAVKKLHAHLVVSGLHNCQYAMSKVIRSYALQQSDLVFAHKVFEQIESPTTFLWNT 380
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ GL A F++ EKG+ PD TF +L AC +G ++ + + +
Sbjct: 381 LLRGLAQSDAPKDAIVFYKKAQEKGMKPDNMTFPFVLKACAKTYAPKEGEQMHSHVIK 438
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 126/248 (50%), Gaps = 4/248 (1%)
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
++ ++ + ++T ++ I+ A +FD + ++V +I G+ + +++ LF M
Sbjct: 4 KNVVSWNVVITGFAGWGEIEYARLLFDQMPCRNVVSWTGLIDGYTRACLYAEAVALFRHM 63
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G +P E T++ ++ + + +G+ +HG+C+K S V + L+ +YA+ +
Sbjct: 64 MAGGISPSEITVLAVVPAISNLGGILMGEMLHGYCVKKGIMSDARVGNSLIDLYAKIGSV 123
Query: 257 NSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ VF+ + +LV+W+++I+G++ G +AL F ++ G + + + SV+ A
Sbjct: 124 QNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIRPNRITFLSVINA 183
Query: 316 AAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNII 373
+ V G A V ++ + + ++DM + G L Q+ E + E N+I
Sbjct: 184 CSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPVEVNVI 243
Query: 374 TYNSVILG 381
+ ++LG
Sbjct: 244 VWR-ILLG 250
>gi|225444329|ref|XP_002264248.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
[Vitis vinifera]
Length = 767
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 298/577 (51%), Gaps = 34/577 (5%)
Query: 6 HFLVLELSKSHQSLSR---TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
+F L K+ +L R T ++HA + + L D F A LV Y A +FD
Sbjct: 52 NFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFD 111
Query: 63 KTPQRSVFL--WNSIIRAYALAHRFNDAKSLFKNLLRTQ-------LKPDNFTYACITRA 113
+ P+ SV + W ++I AY+ ++A F + + D + + A
Sbjct: 112 EMPEGSVDVVSWTALISAYSSNGCVDEAFKAFGRMRWMRGWDGSECCGVDVVSLGALVSA 171
Query: 114 CSENSDLPGLR---FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDP 168
C+ LR VHG + G G + +++V YS + A +VF+G+
Sbjct: 172 CAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQR 231
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT---PDEYTLVGLISGLWEPSLLSVGQ 225
D+V NS+ISGF G +++L+ F+ M+ G + P+ T++ L+ E +
Sbjct: 232 DVVSWNSLISGFTLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSS 291
Query: 226 GIHGFCLKSSFDSYDYVSSVLV-----SMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+H + + S S V+V M+ARC + A +F+ + ++V WSA+I G
Sbjct: 292 WVHEY-ISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAG 350
Query: 281 YSQQGDYGKALYYFRKLNMQGK------KADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
Y Q +AL FR++ M+G K + V + SV+AA ++ ++IH Y +
Sbjct: 351 YEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVA 410
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITYNSVILGLGLHGFTYQAF 392
G + ++SAL+DM +KCG + G QVF M E R +++++S+I G+HG +A
Sbjct: 411 TGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRAL 470
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
E F ++ G P+E T+ ++L AC H GLV G+ F M ++YG+ +HY +V L
Sbjct: 471 ELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDL 530
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG+L+EA++ I ++P D A+ G+LL+ CH++GN L EIV ++ D +
Sbjct: 531 LGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHH 590
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+L+N Y + GRWDDV+++R ++ +GLRK G S++
Sbjct: 591 VLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFI 627
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 5/138 (3%)
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
YH S+ H D W++LI + Q AL +F ++ ++ ++L A A
Sbjct: 9 YHC--SISHKDTFHWNSLIAKNATQNPQ-TALTFFTRMQAHAVPSNNFTFPALLKACAAL 65
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER--NIITYNS 377
+ P +H Y+ + G ++ALVD Y KCG+ QVF+ M E +++++ +
Sbjct: 66 RRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTA 125
Query: 378 VILGLGLHGFTYQAFEFF 395
+I +G +AF+ F
Sbjct: 126 LISAYSSNGCVDEAFKAF 143
>gi|357119036|ref|XP_003561252.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71490-like [Brachypodium distachyon]
Length = 692
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 266/512 (51%), Gaps = 36/512 (7%)
Query: 74 SIIRAYALAHRF-NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
+I+ + L H F A + ++ + R+ + PD FTY + RAC+E DL R VH +
Sbjct: 131 NILISSCLRHGFPRHALAAYQQMARSAVLPDAFTYPSVLRACAEAGDLALGRAVHLHGLA 190
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
+G+G +ALV+ Y+K + A KVF+G++ D+V NSMIS + G W ++++L
Sbjct: 191 TGVGGHLFFQNALVSMYAKSGDLVAARKVFEGMAQKDVVSWNSMISAYVAVGQWVQAVEL 250
Query: 193 FD-------------WMLRLG---KTPDEYTLVGLISGLWEPSL---------------- 220
F+ W G T D VGLI +
Sbjct: 251 FERMRAEEAEVNSVTWNTIAGVYINTRDHRAAVGLIREMVSDGAAVDFVTLVIGSNACSR 310
Query: 221 ---LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
L +G+ IHG ++ + D + V++ L++MYARC M+SA +F L P +VTW+ +
Sbjct: 311 VGWLRLGKEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNTM 370
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I ++ + +A ++ G + + V + ++LA A+ AN+ G +H +++++GF
Sbjct: 371 IASFALSDEAEEASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNGF 430
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ ++ ++L+DMYSK G L + VF+TM +R++I+Y +I G G+ G A F
Sbjct: 431 KGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQ 490
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+I+ G+ PD + +L AC H GLV +G ++F +MT YGI+ + EHY MV L +G
Sbjct: 491 MIDSGIKPDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARSG 550
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
LE+A + P + AL+ CH GN + E A +L E + V+++N
Sbjct: 551 LLEKAEGMLNESSSPPTSMMWAALVGACHDRGNIIIGERAARRLLEMKTENAGHYVLIAN 610
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA G WD++ +R + D G+ K G++WV
Sbjct: 611 MYAAAGCWDELATVRKLMRDLGVTKAPGLAWV 642
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 142/302 (47%), Gaps = 12/302 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H L + + A L+ +YA + SA +LF V WN++I ++AL+
Sbjct: 318 KEIHGLAVRMNCDGVESVANALITMYARCKHMDSACLLFKMLACPGVVTWNTMIASFALS 377
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A L ++ ++P+ T + C+ ++L + +H + +G +
Sbjct: 378 DEAEEASRLVHEMVGAGVQPNYVTVVTLLALCARVANLQHGQELHSHIVKNGFKGYRLLW 437
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ YSK + A VFD + D D++ MI+G+ G +L+LFD M+ G
Sbjct: 438 NSLIDMYSKSGXLSVAQNVFDTMDDRDMISYTXMIAGYGMQGKGTIALRLFDQMIDSGIK 497
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD ++V ++S L++ G+ + + +K + Y S +V +YAR +
Sbjct: 498 PDHISMVTVLSACSHSGLVTEGEKLFDKMTSSYGIKPQMEHY----SCMVDLYARSGLLE 553
Query: 258 SAYHVFN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKADP-VLIASVLA 314
A + N S P + W+AL+ +G+ R+ L M+ + A VLIA++ A
Sbjct: 554 KAEGMLNESSSPPTSMMWAALVGACHDRGNIIIGERAARRLLEMKTENAGHYVLIANMYA 613
Query: 315 AA 316
AA
Sbjct: 614 AA 615
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 76/186 (40%), Gaps = 23/186 (12%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L +L +ELH+ + K L+ +Y+ + L A+ +FD R
Sbjct: 405 LLALCARVANLQHGQELHSHIVKNGFKGYRLLWNSLIDMYSKSGXLSVAQNVFDTMDDRD 464
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ + +I Y + + A LF ++ + +KPD+ + + ACS H
Sbjct: 465 MISYTXMIAGYGMQGKGTIALRLFDQMIDSGIKPDHISMVTVLSACS-----------HS 513
Query: 129 GAIVSGLGR-DSITS-----------SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
G + G D +TS S +V Y++ L+++A + + S P + +
Sbjct: 514 GLVTEGEKLFDKMTSSYGIKPQMEHYSCMVDLYARSGLLEKAEGMLNESSSPPTSMMWAA 573
Query: 177 ISGFAH 182
+ G H
Sbjct: 574 LVGACH 579
>gi|359478617|ref|XP_003632146.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Vitis vinifera]
Length = 628
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 270/531 (50%), Gaps = 7/531 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH+ + K + + + LV +Y + SA+ LFD+ P R+V WNS+I Y
Sbjct: 100 QLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSAQRLFDEMPHRNVVTWNSLISGYLHVG 159
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF +++ + P F+ + + C D VHG ++ G + + +
Sbjct: 160 CPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRMEDTKLGIQVHGLSMKCGFCYNIVVGT 219
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ YSK ID + +FD + + +++ SM++G+AHC ++ L M RLG
Sbjct: 220 CLIDLYSKGWNIDASRLMFDLMPERNIITWTSMVAGYAHCQQPVAAMVLVRDMQRLGIRL 279
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+ T L+S + L + +H ++ +S Y+ LV++Y+ C+ +S+ F
Sbjct: 280 NYVTYNCLLSSFSSSNDLDHCKQVHCRIIREGLESNSYLEVTLVTVYSECS--SSSLEDF 337
Query: 264 NSLFHP----DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
N + D ++W+A+I G S G+ AL F K+ G D SVL A
Sbjct: 338 NKVCSGVTRWDQISWNAVIGGLSNLGNGEAALKCFSKMRQAGIDMDLFTFTSVLRAIGMI 397
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ + G IH V++ G+ ++ V + LV MY++CG + +VF M ++I++NS++
Sbjct: 398 STLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLL 457
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G HG+ +A E F + G+ PD +TF +L AC H GL++ G E F M +Y +
Sbjct: 458 SGCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSACRHVGLLDKGLEYFDLMRNDYSL 517
Query: 440 QA-KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
++ TEHY MV L AG L EA FI ++P P+V ALLS C ++GN ++A A
Sbjct: 518 ESPTTEHYSSMVDLFSRAGYLSEAEDFINTMPIEPGPSVYKALLSACQVHGNVEIAVRCA 577
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L + P V+LSN A G WD+V +R + D G+RKE G SW+
Sbjct: 578 KKLLQMCPNDPVIYVLLSNVQATVGYWDNVASIRKVMCDRGVRKEPGYSWI 628
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 152/313 (48%), Gaps = 11/313 (3%)
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ S A+ T ++L+L F G D CNS I+ L+L + +
Sbjct: 24 LRSRAVTTQTNRLAL-------FPG---NDFFSCNSHIACDTDEKQSSVDLKLLAQLQQH 73
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P + L ++S + + VG +H +K FDS Y+ S LV MY +C ++SA
Sbjct: 74 GSAPTAHILNRMVSSCAKSGSVFVGIQLHSTIIKVGFDSNVYICSALVDMYGKCGAVSSA 133
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F+ + H ++VTW++LI+GY G A+ F ++ G P +++VL +
Sbjct: 134 QRLFDEMPHRNVVTWNSLISGYLHVGCPEIAIELFLEMVKVGIDPTPFSVSAVLVGCWRM 193
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G +HG ++ GF +++V + L+D+YSK + +F+ M ERNIIT+ S++
Sbjct: 194 EDTKLGIQVHGLSMKCGFCYNIVVGTCLIDLYSKGWNIDASRLMFDLMPERNIITWTSMV 253
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G A RD+ G+ + T++ LL + ++ +++ R+ E G+
Sbjct: 254 AGYAHCQQPVAAMVLVRDMQRLGIRLNYVTYNCLLSSFSSSNDLDHCKQVHCRIIRE-GL 312
Query: 440 QAKTEHYIYMVKL 452
++ + + +V +
Sbjct: 313 ESNSYLEVTLVTV 325
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++HALV KA + LV +YA + A+ +F + V WNS++
Sbjct: 399 TLDEGKQIHALVLKAGYGSNLNVQNGLVSMYARCGSINDAKRVFSLMDRHDVISWNSLLS 458
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
A +A LF+ + R+ +KPDN T+ + AC
Sbjct: 459 GCAYHGYGREAVELFEQMRRSGVKPDNTTFLVVLSAC 495
>gi|242067895|ref|XP_002449224.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
gi|241935067|gb|EES08212.1| hypothetical protein SORBIDRAFT_05g006590 [Sorghum bicolor]
Length = 570
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 285/549 (51%), Gaps = 11/549 (2%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
+S S SL +HA + + +AT L+ A + L AR +FD P R ++
Sbjct: 22 VSSSPASLRALLPIHARAIVLGVSANLAFATSLIAGAAPAS-LAYARRVFDAAPVRDAYM 80
Query: 72 WNSIIRAYALAHRFN--------DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
WN+++RA+A +H + DA +L+K + + PD++TY + AC+
Sbjct: 81 WNTLLRAHAHSHSHSQSSHSHAVDALALYKRMRAAGVAPDHYTYPIVLPACAAARQPRLG 140
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFA 181
R VHG A+ L D L+ Y + + +A VF S +V +M++G+
Sbjct: 141 RAVHGDAVRFALDGDGFVRCTLIAMYFQEGEVADAELVFAESHGSSRTVVSWTAMVAGYV 200
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
F+ ++L LF M+ G P+E TL+ + L L G+ +HGF ++S FD+
Sbjct: 201 QNYFFGEALALFSTMVAEGVLPNEITLISFLPCLQGQEWLDAGEMVHGFVIRSGFDANIP 260
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+++ L++MY +C + A +F + LV+W+ ++ Y Q GD +A+ +F ++ +
Sbjct: 261 LANALIAMYGKCGSIPMAEALFEGMAVRSLVSWNTMVAIYEQHGDVVEAIKFFHRMLTEK 320
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D V + SVL+A +S + G +H + HG + + + LVDMY+KCG +
Sbjct: 321 VGFDCVTLVSVLSACGRSGALETGKWVHEFARSHGLDADARIGNVLVDMYAKCGEIADAR 380
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+VF+ + R +++++++I HG + +A + F + +G+ P+ TF+A+L AC H G
Sbjct: 381 KVFDCLHVRGVVSWSAMISAYANHGDSEEALKLFCLMKSEGVRPNSFTFTAVLVACGHSG 440
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LVN+G + F + +Y + EHY +V +LG AG L EAY I + D V GA
Sbjct: 441 LVNEGLKHFNSILSDYQMSPTLEHYACIVDMLGRAGRLVEAYEIIRGMSLCPDKCVWGAF 500
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L C ++ N +LAE VA LF++ + V++SN Y E G +D ++R + + L+
Sbjct: 501 LGGCKLHSNLELAEFVAKDLFQSGSNDVTFYVLMSNMYFEAGMLEDAERIRRAMKEMELK 560
Query: 542 KEAGVSWVS 550
K AG S V+
Sbjct: 561 KTAGHSAVN 569
>gi|297805814|ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316627|gb|EFH47050.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 674
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 277/542 (51%), Gaps = 4/542 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S+S +H + ++ D + L+ +Y + AR +FD R V WN++I
Sbjct: 131 KSISLGLVIHGRILRSWFGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMI 190
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y NDA +F ++ + PD+ T + C L R VH LG
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLG 250
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ALV Y K +DEA VF + D++ MI+G+ G + +L+L M
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLM 310
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G P+ T+ L+S + L+ G+ +HG+ ++ S + + L+SMYA+C +
Sbjct: 311 QFEGVRPNAVTIASLVSACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHI 370
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ + VF+ WSA+I G Q AL F+++ + + + + S+L A
Sbjct: 371 DLCFRVFSGASRNHTGPWSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAY 430
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER----NI 372
A A++ IH Y+ + GF S+ ++ LV +YSKCG L ++F + E+ ++
Sbjct: 431 ATLADLRQTMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDV 490
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+ + ++I G G+HG + A + F +++ G+ P+E TF++ L AC H GLV +G +F+
Sbjct: 491 VLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFSF 550
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
M E Y A++ HY +V LLG AG L+EAY+ I ++P + GALL+ C + N
Sbjct: 551 MLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTIWGALLAACVTHENVQ 610
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
L E+ A++LFE +P V+L+N YA GRW D+ K+R+ + + GLRK+ G S +
Sbjct: 611 LGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIR 670
Query: 553 SN 554
SN
Sbjct: 671 SN 672
Score = 207 bits (527), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 132/479 (27%), Positives = 236/479 (49%), Gaps = 7/479 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
QS+S+TK LH V + +T L YAL + AR LFD+ PQ S+ +N +I
Sbjct: 29 QSISKTKALHCHVITGGRVSGHILST-LSVTYALCGHIAYARKLFDEMPQSSLLSYNIVI 87
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLK--PDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
R Y ++DA ++F ++ +K PD +TY + +A E + +HG + S
Sbjct: 88 RMYVRDGLYHDAINVFIRMVSEGIKCVPDGYTYPFVAKAAGELKSISLGLVIHGRILRSW 147
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
G D +AL+ Y ++ A VFD + + D++ N+MISG+ G+ + +L +FD
Sbjct: 148 FGMDKYVQNALLAMYMNFGRVEMARNVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD 207
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
WM+ G PD T+V ++ L +G+ +H + V + LV+MY +C
Sbjct: 208 WMVNEGVDPDHATIVSMLPVCGHLKGLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCG 267
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
M+ A VF + D++TW+ +I GY + GD AL R + +G + + V IAS+++
Sbjct: 268 RMDEARFVFGRMERRDVITWTCMINGYIEDGDVENALELCRLMQFEGVRPNAVTIASLVS 327
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + + G +HG+ I+ +++ ++L+ MY+KC ++ L +VF S +
Sbjct: 328 ACGDALKLNDGKCLHGWAIRQKVCSDIIIETSLISMYAKCKHIDLCFRVFSGASRNHTGP 387
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++++I G + A + F+ + + + P+ +T ++LL A + I +T
Sbjct: 388 WSAIIAGCVQNELVRDALDLFKRMRREDVEPNIATLNSLLPAYATLADLRQTMNIHCYLT 447
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF---IWSLPKPVDPAVSGALLSCCHIYGN 490
+ G + + +V + G LE A+ I K D + GAL+S ++G+
Sbjct: 448 KT-GFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD 505
>gi|115468780|ref|NP_001057989.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|50725579|dbj|BAD33047.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|113596029|dbj|BAF19903.1| Os06g0597500 [Oryza sativa Japonica Group]
gi|125597760|gb|EAZ37540.1| hypothetical protein OsJ_21869 [Oryza sativa Japonica Group]
Length = 530
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 164/513 (31%), Positives = 260/513 (50%), Gaps = 33/513 (6%)
Query: 71 LW--NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
LW N +IR A F +++ +L L D+FTY + RA R H
Sbjct: 14 LWECNVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHA 73
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
A+ +G D+ T S+L+ Y+ L +D A KVFD + LVL N M+ + CG++
Sbjct: 74 AAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGWYSA 133
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH-------GF----------- 230
++ L + M R G TPD TLV ++ LS+G+ IH GF
Sbjct: 134 AVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDM 193
Query: 231 -----CLKSSFDSYDYVS-------SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
CL+ + ++ + ++LVS Y ++ A +FN DL+ W+A+I
Sbjct: 194 YTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMI 253
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
Q G + +AL FR + MQ + D + ++L A + G IH Y Q +
Sbjct: 254 NACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMK 313
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ ++ +AL+DMYSKCG++ ++VF M R+ + ++I GL +G +A E F+D+
Sbjct: 314 IDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDM 373
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ PD TF +L ACCHGGLV++GR+ F M E Y I+ + EHY +V LLG AG
Sbjct: 374 QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGL 433
Query: 459 LEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L+EA I +P D + GALL+ C +GN +++E + ++ E D + +++SN
Sbjct: 434 LDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSN 493
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
YA RW+DV+++R + ++K AG S +
Sbjct: 494 VYATASRWEDVIRVRGKMAHPTVKKNAGCSLIE 526
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 105/445 (23%), Positives = 182/445 (40%), Gaps = 64/445 (14%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++ HA K D + + L+ +Y + + AR +FD+ P R++ LWN ++R Y
Sbjct: 69 RKAHAAAVKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRC 128
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH---------GGAIVS 133
++ A +L + + R+ + PD T ACS DL R +H + +
Sbjct: 129 GWYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVAN 188
Query: 134 GL---------------------GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
L R+ I+ + LV+ Y +D+A +F+ + DL+L
Sbjct: 189 ALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLIL 248
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
+MI+ G ++++L LF M PD +T+V L++ L G+ IH +
Sbjct: 249 WTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAE 308
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ + + L+ MY++C + + VF + D W+A+I G + G G+AL
Sbjct: 309 QRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALE 368
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F+ + K D V VL+A HG ++ G + A+ ++Y
Sbjct: 369 LFQDMQRSKVKPDGVTFIGVLSACC-----------HGGLVDEGRKQ----FHAMREVYQ 413
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI-IEKGLNPDESTFS 411
E + Y+ ++ LG G +A D+ I K P F
Sbjct: 414 ---------------IEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMP---LFG 455
Query: 412 ALLCACCHGGLVNDGREIFTRMTEE 436
ALL AC G V + R+ E+
Sbjct: 456 ALLTACKAHGNVEMSERLTKRICEQ 480
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 5/292 (1%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
R+ T LV Y L L AR+LF++ ++ + LW ++I A F +A +LF+++
Sbjct: 213 RNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDM 272
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+++PD FT + C+ L ++H A + D++ +AL+ YSK I
Sbjct: 273 QMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHI 332
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+++++VF + D ++I G A G ++L+LF M R PD T +G++S
Sbjct: 333 EKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSAC 392
Query: 216 WEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPD-LV 272
L+ G+ H + S LV++ R ++ A + + + D +
Sbjct: 393 CHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMP 452
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV--LIASVLAAAAKSANV 322
+ AL+T G+ + +++ Q + V L+++V A A++ +V
Sbjct: 453 LFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDV 504
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + + +H + + D T L+ +Y+ + + +F + R W +II
Sbjct: 296 ALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIIC 355
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
A + A LF+++ R+++KPD T+ + AC + G + H V +
Sbjct: 356 GLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIE 415
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGV 165
S LV + L+DEA ++ V
Sbjct: 416 PRVEHYSCLVNLLGRAGLLDEAERLIGDV 444
>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
Length = 659
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 156/528 (29%), Positives = 272/528 (51%), Gaps = 33/528 (6%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+LH ++ + ++P KL+R YA R +FD+ R+V +N +IR+Y
Sbjct: 38 KKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNN 97
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
HR++D +F+ ++ +PDN+TY C+ +ACS + +L +HG + GL +
Sbjct: 98 HRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVG 157
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L+ Y K + EA +VFD + D+V NSM++G+AH +D +L++ M G+
Sbjct: 158 NGLIAMYGKCGCLFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQK 217
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T+ L+ + +S ++ YV + V++ +
Sbjct: 218 PDGCTMASLMPAV----------------ANTSSENVLYVEKIFVNLERK---------- 251
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+L++W+ +I Y + +A+ + ++ + D + ASVL A + +
Sbjct: 252 -------NLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVLPACGDLSAL 304
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH YV + ++++ ++L+DMY++CG L +VF+ M R++ ++ S+I
Sbjct: 305 LLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDRMKFRDVASWTSLISAY 364
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+ G A F +++ G PD F A+L AC H GL+++GR F +MT++Y I +
Sbjct: 365 GMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEGRIYFKQMTDDYRITPR 424
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V LLG AG ++EAY+ I +P + V LLS C ++ N D+ + A L
Sbjct: 425 IEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSCRVFTNMDIGILAADNLL 484
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ P + Y V+LSN YA+ GRW +V ++R + +RK G+S V
Sbjct: 485 QLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPGISNVE 532
>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Cucumis sativus]
Length = 837
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 161/527 (30%), Positives = 265/527 (50%), Gaps = 1/527 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA V ++ D L+ Y + + + LFD+ +++ W ++I Y
Sbjct: 263 KQIHAYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQN 322
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A L + R KPD + + + +C L R +H I L D+ +
Sbjct: 323 SYDWEAVELVGEMFRMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVT 382
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ YSK + +D+A +VFD V+ +V N+MI G++ G+ +L++F M +
Sbjct: 383 NALIDMYSKCNALDDAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVS 442
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P T V L+ L + + IHG +K F + SS L+ +Y++C+C+ A +V
Sbjct: 443 PSFLTFVSLLGLSAALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYV 502
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V W++L +GY+ Q +A + L + ++ + A++ AA+ A++
Sbjct: 503 FEGTTNKDIVVWNSLFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASL 562
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G H V++ G E +++ALVDMY+KCG + ++F + ++ +NS+I
Sbjct: 563 PHGQQFHNQVMKMGLESDPFITNALVDMYAKCGSVEEAEKIFSSSVWKDTACWNSMISMY 622
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A F ++ +NP+ TF ++L AC H G V DG + + M YGI+
Sbjct: 623 AQHGKVEEALRMFETMVSNNINPNYVTFVSVLSACSHVGFVEDGLQHYNSMA-RYGIEPG 681
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY +V LLG AG L EA FI + V +LLS C ++GN +LA+ A
Sbjct: 682 IEHYASVVTLLGRAGRLTEAREFIEKMTIRPAALVWRSLLSACRVFGNVELAKHAAEMAI 741
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP VMLSN +A G W DV +LR + NG+ KE G SW+
Sbjct: 742 SIDPMDSGSYVMLSNIFASKGMWGDVKRLRLKMDVNGVVKEPGQSWI 788
Score = 188 bits (477), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 119/439 (27%), Positives = 222/439 (50%), Gaps = 1/439 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H+ V K+ D + T LV LYA + + AR++FD ++ W +II Y +
Sbjct: 163 QVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSG 222
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + LF ++ + + PD + + I ACS L G + +H + S D T +
Sbjct: 223 RSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYN 282
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ Y+K + +FD + +++ +MI+G+ + ++++L M R+G P
Sbjct: 283 VLIDFYTKCGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKP 342
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
DEY +++ L G+ IH + +K + ++V++ L+ MY++CN ++ A VF
Sbjct: 343 DEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVF 402
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + +V ++A+I GYS+QG AL F+++ ++ + S+L +A +
Sbjct: 403 DVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQ 462
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
IHG +I++GF L SSAL+D+YSKC + VFE + ++I+ +NS+ G
Sbjct: 463 LSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYN 522
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
L + +AF+ + D+ P+E TF+AL A + G++ F + G+++
Sbjct: 523 LQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQ-FHNQVMKMGLESDP 581
Query: 444 EHYIYMVKLLGLAGNLEEA 462
+V + G++EEA
Sbjct: 582 FITNALVDMYAKCGSVEEA 600
Score = 172 bits (435), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 153/596 (25%), Positives = 258/596 (43%), Gaps = 74/596 (12%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S++S+ +++H V L D F + L+ Y + A LFDK P R++ W+S
Sbjct: 52 SNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPNRNLVSWSS 111
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSE-NSDLPGLRFVHGGAIV 132
++ Y A F RT + K + + A I RAC + + PG + VH I
Sbjct: 112 VVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQ-VHSYVIK 170
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
SG G D ++LV Y+K ID+A VFDG+ V ++I+G+ G + SLQL
Sbjct: 171 SGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLKTPVTWTAIITGYTKSGRSEVSLQL 230
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F+ M+ PD+Y L +++ L G+ IH + L+S +VL+ Y +
Sbjct: 231 FNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVSTYNVLIDFYTK 290
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
C + + +F+ L ++++W+ +I GY Q +A+ ++ G K D +SV
Sbjct: 291 CGRVKAGKALFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSV 350
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L + + G IH YVI+ E V++AL+DMYSKC L +VF+ ++ ++
Sbjct: 351 LTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHSV 410
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRD----------------------------------- 397
+ YN++I G G+ A E F++
Sbjct: 411 VYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGL 470
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE-----------YGIQAKTEHY 446
II+ G + D+ T SAL+ + D R +F T + Y +Q K+E
Sbjct: 471 IIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEA 530
Query: 447 IYMVKLLGLA---------GNLEEAYSFIWSLPK-------------PVDPAVSGALLSC 484
+ L L+ L A S + SLP DP ++ AL+
Sbjct: 531 FKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDM 590
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
G+ + AE + D + M+S YA+ G+ ++ +++ + +V N +
Sbjct: 591 YAKCGSVEEAEKIFSSSVWKDT--ACWNSMIS-MYAQHGKVEEALRMFETMVSNNI 643
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 171/362 (47%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L +++H+ V K L D F L+ +Y+ N L A+ +FD S
Sbjct: 350 VLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALDDAKRVFDVVTCHS 409
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +N++I Y+ A +F+ + + P T+ + + L + +HG
Sbjct: 410 VVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHG 469
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G D TSSAL+ YSK S I +A VF+G ++ D+V+ NS+ SG+ ++
Sbjct: 470 LIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEE 529
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +L+ + + P+E+T L + + L GQ H +K +S ++++ LV
Sbjct: 530 AFKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVD 589
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A +F+S D W+++I+ Y+Q G +AL F + + V
Sbjct: 590 MYAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVT 649
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
SVL+A + V G + + ++G E + +++V + + G L + E M+
Sbjct: 650 FVSVLSACSHVGFVEDGLQHYNSMARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMT 709
Query: 369 ER 370
R
Sbjct: 710 IR 711
>gi|225434804|ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 658
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 157/463 (33%), Positives = 256/463 (55%), Gaps = 6/463 (1%)
Query: 94 NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
+L + P TY + +C+ + LP +H I G +D ++ L+ YS+L
Sbjct: 68 QVLSQEPNPTQHTYELLILSCTRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELD 127
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT----LV 209
ID A KVFD + + N++ G+ + L L+ M R+G D +T L
Sbjct: 128 SIDNARKVFDKTRKRTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLK 187
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
++ SLL G+ IHG L+ F+ + ++ + L+ MYAR C+ +A VF+ +
Sbjct: 188 ACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVK 247
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAV 327
++V+WSA+I YS+ G +AL FRK+ ++ + P V + SVL A A A + G +
Sbjct: 248 NVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKL 307
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+HGY+++ G + + V SALV +Y++CG L LG +VFE M +R+++++NS+I G+HGF
Sbjct: 308 MHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGF 367
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
+A + F+++I++GL+P +F ++L AC H GLV +G+ +F M + I EHY
Sbjct: 368 GRKAIQIFKEMIDQGLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYA 427
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPR 507
MV LLG A L+EA I + P V G+LL C I+ N +LAE +LFE +P
Sbjct: 428 CMVDLLGRANRLDEAAKIIDDMRIEPGPKVWGSLLGSCRIHCNVELAERATSRLFELEPT 487
Query: 508 KGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L++ YAE W++V +++ + GL+K G S +
Sbjct: 488 NAGNYVLLADIYAEAKMWNEVKRVKMLLEARGLQKVPGRSCIE 530
Score = 152 bits (383), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 189/368 (51%), Gaps = 8/368 (2%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L ++ + SL + +LH + +DPF ATKL+ +Y+ + + +AR +FDKT +
Sbjct: 83 LLILSCTRQN-SLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVFDKTRK 141
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL--- 123
R++++WN++ RA LA + L++ + R + D FTY + +AC + L
Sbjct: 142 RTIYVWNALFRALTLAGYGREVLDLYRRMNRIGVPSDRFTYTYVLKACVASEAFVSLLLN 201
Query: 124 -RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R +HG + G + L+ Y++ + A +VFD + ++V ++MI+ ++
Sbjct: 202 GREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNVVSWSAMIACYSK 261
Query: 183 CGFWDKSLQLFDWMLRLGKT--PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G ++L+LF M+ + P+ T+V ++ + L G+ +HG+ L+ DS
Sbjct: 262 NGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAALEQGKLMHGYILRRGLDSIL 321
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V S LV++YARC + + VF + D+V+W++LI+ Y G KA+ F+++ Q
Sbjct: 322 PVVSALVTVYARCGNLELGHRVFERMEKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQ 381
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGL 359
G P+ SVL A + + V G V+ +++ H SV + +VD+ + L
Sbjct: 382 GLSPSPISFVSVLGACSHAGLVEEGKVLFESMVRGHKIFPSVEHYACMVDLLGRANRLDE 441
Query: 360 GIQVFETM 367
++ + M
Sbjct: 442 AAKIIDDM 449
>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
Length = 891
Score = 271 bits (692), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 275/540 (50%), Gaps = 5/540 (0%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ +L + +H K + F A L+ +Y+ AR LFD P R + WN
Sbjct: 226 KACGTLVDGRRIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWN 285
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I A + + +K + T I C + D+ +H I
Sbjct: 286 AMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKH 345
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL D S+AL+ Y+K +++A K F + D+V NS+I+ + + F
Sbjct: 346 GLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYAR 252
M G PD TLV L S + + + +HGF ++ + D V + +V MYA+
Sbjct: 406 VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAK 465
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV--LIA 310
++SA+ VF + D+++W+ LITGY+Q G +A+ ++ + + K+ P
Sbjct: 466 LGLLDSAHKVFEIILVKDVISWNTLITGYAQNGLASEAIEVYKMME-ECKEIIPNQGTWV 524
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A A + G IHG VI+ L V V++ L+D+Y KCG L + +F + +
Sbjct: 525 SILPAYAHVGALQQGMRIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 584
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+ +T+N++I G+HG + + F +++++G+ PD TF +LL AC H G V +G+ F
Sbjct: 585 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 644
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
R+ +EYGI+ +HY MV LLG AG LE AY FI +P D ++ GALL C I+GN
Sbjct: 645 -RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGN 703
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L + + +LFE D + Y V+LSN YA G+W+ V K+R + GL+K G S +
Sbjct: 704 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 763
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 266/513 (51%), Gaps = 16/513 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LHAL+ A ++ F +T+LV LYA + +R FD+ PQ+ V+ WNS+I AY
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSMISAYVHN 195
Query: 83 HRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
F++A F LL ++++PD +T+ + +AC D R +H A G +
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLGFQWNVFV 252
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++L+ YS+ A +FD + D+ N+MISG G ++L + D M G
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ T+V ++ + +S IH + +K + +VS+ L++MYA+ + A
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F +F D+V+W+++I Y Q D A +F K+ + G + D + + S+ + A+S +
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432
Query: 322 VWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+HG++++ G+ + V++ +A+VDMY+K G L +VFE + +++I++N++I
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISWNTLIT 492
Query: 381 GLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A E ++ + E K + P++ T+ ++L A H G + G I R+ + +
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVIKT-NL 551
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYGNSDLAEIVA 498
++ + G G L +A S + +P+ + +V+ A++SC I+G+++ +
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ--ESSVTWNAIISCHGIHGHAEKTLKLF 609
Query: 499 HQLFEN--DPRKGAYKVMLS----NTYAEDGRW 525
++ + P + +LS + + E+G+W
Sbjct: 610 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 4/298 (1%)
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
++ P + +H +V+G + S+ LV Y+ L + + FD + D+ NSM
Sbjct: 129 STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYTWNSM 188
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
IS + H G + +++ F +L + + PD YT ++ L G+ IH + K
Sbjct: 189 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRRIHCWAFKLG 245
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
F +V++ L+ MY+R A +F+ + D+ +W+A+I+G Q G+ +AL
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 305
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ ++G K + V + S+L + ++ +IH YVI+HG E + VS+AL++MY+K G
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
L + F+ M +++++NS+I + A FF + G PD T +L
Sbjct: 366 NLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423
>gi|90657601|gb|ABD96900.1| hypothetical protein [Cleome spinosa]
Length = 924
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 175/555 (31%), Positives = 274/555 (49%), Gaps = 29/555 (5%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LHA K+ ++D T + +YA N + A+ LFD + ++ +N++I Y+
Sbjct: 303 QLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKD 362
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF+ L ++ L D + + RAC+ L +HG A S R+ ++
Sbjct: 363 NGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVAN 422
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A + Y K +DEA +VFD + D V N++I+ K+L + MLR G P
Sbjct: 423 AFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEP 482
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
DEYT ++ SL + G IH +K S Y+ S LV MY++C ++ A +
Sbjct: 483 DEYTFGSVLKACAGDSL-NHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIH 541
Query: 264 NSLF-----------HPD----------------LVTWSALITGYSQQGDYGKALYYFRK 296
N +F HP+ +V+W+A+I+GY + A +F +
Sbjct: 542 NKIFIGIGDSNTYSEHPETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNR 601
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
+ G D ++VL A A++ G IH +VI+ + V + S LVDMYSKCG
Sbjct: 602 MMEMGITPDKFTYSTVLDTCANLASIGLGKQIHAHVIKKELQYDVYICSTLVDMYSKCGN 661
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
L +FE R+ +T+N++I G HG +A + F ++ + P+ +TF +LL A
Sbjct: 662 LHDSRLMFEKAPIRDFVTWNAMICGYAHHGMGEEAIKLFESMVLMNIMPNHATFVSLLRA 721
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C H GLV G + F M +EYG+ + EHY MV +LG +G +E+A I +P D
Sbjct: 722 CAHMGLVERGLDYFHMMKKEYGLDPRLEHYSNMVDILGKSGEVEKALELIQEMPFEADDV 781
Query: 477 VSGALLSCCHI-YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ LLS C I N + AE+ A+ L DP+ + ++LSN YA+ G WD +LR +
Sbjct: 782 IWRTLLSACKINRNNVEAAEVAANALLRLDPQDSSTYILLSNIYADAGMWDKASELRTAM 841
Query: 536 VDNGLRKEAGVSWVS 550
+ L+KE G SWV
Sbjct: 842 RSDKLKKEPGCSWVE 856
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 113/403 (28%), Positives = 203/403 (50%), Gaps = 5/403 (1%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
LRD ++ YA +N + A + F+ P R V WNS++ + ++ +F
Sbjct: 112 LRDVVSWNAMIFGYAASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIE 171
Query: 95 LLRTQLKPDNFTYACITRACS--ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL 152
+ R+ ++ DN +++ I + CS EN L G + +HG A+ G D ++ SAL+ Y+K
Sbjct: 172 MGRSGVEFDNKSFSVILKVCSILENYKL-GTQ-IHGIALRMGYDTDVVSGSALLDMYAKC 229
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
+DE+ VF + + + +++I+G F D L++F M ++G + ++
Sbjct: 230 KRLDESFTVFYAMPQKNWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVL 289
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
L +G +H LKS F V + + MYA+CN M A +F+ + +L
Sbjct: 290 KSCATLPDLRLGTQLHAHALKSDFVKDGIVRTATLDMYAKCNNMQDAQRLFDMSENLNLQ 349
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+++A+ITGYSQ+ + +AL FRKL+ D + ++ L A A + G +HG
Sbjct: 350 SYNAMITGYSQKDNGFRALLLFRKLSKSSLGFDEISLSGALRACATVKGLSEGLQLHGLA 409
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+ F ++ V++A +DMY KC L +VF+ M ++ +++N++I + +
Sbjct: 410 TKSNFSRNICVANAFIDMYGKCEALDEACRVFDEMGRKDAVSWNAIIAAHEQNEERSKTL 469
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ G+ PDE TF ++L AC G +N G EI T + +
Sbjct: 470 NILVSMLRSGMEPDEYTFGSVLKACA-GDSLNHGMEIHTTIVK 511
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 221/481 (45%), Gaps = 43/481 (8%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H + + D + L+ +YA L + +F PQ++ W++II +
Sbjct: 202 QIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQKNWISWSAIIAGCVQNN 261
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRDSI 140
+ +FK + + + YA + ++C+ LP LR +H A+ S +D I
Sbjct: 262 FLDGGLKMFKEMQKVGVGVSQSIYASVLKSCAT---LPDLRLGTQLHAHALKSDFVKDGI 318
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+A + Y+K + + +A ++FD + +L N+MI+G++ ++L LF + +
Sbjct: 319 VRTATLDMYAKCNNMQDAQRLFDMSENLNLQSYNAMITGYSQKDNGFRALLLFRKLSKSS 378
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
DE +L G + LS G +HG KS+F V++ + MY +C ++ A
Sbjct: 379 LGFDEISLSGALRACATVKGLSEGLQLHGLATKSNFSRNICVANAFIDMYGKCEALDEAC 438
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+ + D V+W+A+I + Q + K L + G + D SVL A A +
Sbjct: 439 RVFDEMGRKDAVSWNAIIAAHEQNEERSKTLNILVSMLRSGMEPDEYTFGSVLKACAGDS 498
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG------------YLGLG-------- 360
+ G IH +++ G + + S+LVDMYSKCG ++G+G
Sbjct: 499 -LNHGMEIHTTIVKLGMASNPYIGSSLVDMYSKCGMIDEAEKIHNKIFIGIGDSNTYSEH 557
Query: 361 ---IQVFETMSERN----IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
I+ + + +R I+++N++I G + + A FF ++E G+ PD+ T+S +
Sbjct: 558 PETIEEPKGIQDRRVQEMIVSWNAIISGYVMRKQSEDAQRFFNRMMEMGITPDKFTYSTV 617
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSL 469
L C + + G++I + I+ + ++ +Y +V + GNL ++
Sbjct: 618 LDTCANLASIGLGKQIHAHV-----IKKELQYDVYICSTLVDMYSKCGNLHDSRLMFEKA 672
Query: 470 P 470
P
Sbjct: 673 P 673
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 31/227 (13%)
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+G+ H + S F +VS+ L+ +Y C + A +F+ + D+V+W+A+I GY
Sbjct: 66 ELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRDVVSWNAMIFGY 125
Query: 282 S-------------------------------QQGDYGKALYYFRKLNMQGKKADPVLIA 310
+ Q G+ +++ F ++ G + D +
Sbjct: 126 AASNDMVRASLCFEMMPTRDVVSWNSMLSGFLQTGENLESVKVFIEMGRSGVEFDNKSFS 185
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+L + N G IHG ++ G++ V+ SAL+DMY+KC L VF M ++
Sbjct: 186 VILKVCSILENYKLGTQIHGIALRMGYDTDVVSGSALLDMYAKCKRLDESFTVFYAMPQK 245
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
N I+++++I G + F + F+++ + G+ +S ++++L +C
Sbjct: 246 NWISWSAIIAGCVQNNFLDGGLKMFKEMQKVGVGVSQSIYASVLKSC 292
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
V AK G H ++I GF +V VS+ L+ +Y CG LG ++F+ M R+
Sbjct: 55 VFKECAKQRAHELGKQAHAHMIISGFRPTVFVSNCLLQLYINCGNLGYATKLFDGMPLRD 114
Query: 372 IITYNSVILG 381
++++N++I G
Sbjct: 115 VVSWNAMIFG 124
>gi|39546235|emb|CAE04244.3| OSJNBa0089N06.5 [Oryza sativa Japonica Group]
gi|125549842|gb|EAY95664.1| hypothetical protein OsI_17530 [Oryza sativa Indica Group]
gi|215686910|dbj|BAG90780.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 559
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 176/547 (32%), Positives = 272/547 (49%), Gaps = 2/547 (0%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASL-LRDPFYATKLVRLYALNNVLPSARILFDK 63
L+ +L+ S + + K +H VA AS D +TKLV YA + +AR +FD
Sbjct: 13 LYSSLLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLVIFYARFGDVAAARKVFDG 72
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P RSV W +++ YA R +A LF + + +P+ FTY AC+
Sbjct: 73 MPHRSVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSG 132
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
VH A D SAL+ + + +++A ++F + D+V N++I GF
Sbjct: 133 EQVHACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVER 192
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G +L LF ML+ PD YTL + + + IH +K + V
Sbjct: 193 GHDGDALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVI 252
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGK 302
L++ YA+C M+SA +++S+ PDLV+ +ALI+GY+ +Y + A+ F K++ +G
Sbjct: 253 GSLINSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGL 312
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D VL++SVL A A+ G IH Y+ + + + +ALVDMY+K G +
Sbjct: 313 WIDGVLLSSVLCLCASVASARFGTQIHAYMCKKQPMGDIALDNALVDMYAKAGEFSDAKR 372
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
F+ M RN+I++ S+I G +G A F ++E G+ P++ TF +LL AC H GL
Sbjct: 373 AFDEMPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGL 432
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
N G E FT M YGI + EHY + LL G LE+A+ + + ++ GA+L
Sbjct: 433 TNKGMEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAML 492
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C ++GN L E A LF DP +L+N YAE W+D + R+ I + K
Sbjct: 493 GACKLHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGK 552
Query: 543 EAGVSWV 549
E G S +
Sbjct: 553 EVGFSVI 559
>gi|147833186|emb|CAN68635.1| hypothetical protein VITISV_030802 [Vitis vinifera]
Length = 767
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 179/577 (31%), Positives = 298/577 (51%), Gaps = 34/577 (5%)
Query: 6 HFLVLELSKSHQSLSR---TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
+F L K+ +L R T ++HA + + L D F A LV Y A +FD
Sbjct: 52 NFTFPALLKACAALRRLLPTLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFD 111
Query: 63 KTPQRSVFL--WNSIIRAYALAHRFNDAKSLFKNLLRTQ-------LKPDNFTYACITRA 113
+ P+ SV + W ++I AY+ ++A F + + D + + A
Sbjct: 112 EMPEGSVDVVSWTALISAYSSNGCVDEAFXAFGRMRWMRGWDGSECCGVDVVSLGALVSA 171
Query: 114 CSENSDLPGLR---FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDP 168
C+ LR VHG + G G + +++V YS + A +VF+G+
Sbjct: 172 CAVGCGSNCLRRGSAVHGLVVKYGFGVSTHLGNSMVHMYSACKDVGGAWRVFNGIPIEQR 231
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT---PDEYTLVGLISGLWEPSLLSVGQ 225
D+V NS+ISGF G +++L+ F+ M+ G + P+ T++ L+ E +
Sbjct: 232 DVVSWNSLISGFXLNGEAERALRTFEDMVSEGTSAVEPNRVTVIALLKSCAELGCVETSS 291
Query: 226 GIHGFCLKSSFDSYDYVSSVLV-----SMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+H + + S S V+V M+ARC + A +F+ + ++V WSA+I G
Sbjct: 292 WVHEY-ISSRHSSLLVAKDVVVLTALLDMHARCGNLALAREIFDGVEGKNVVCWSAMIAG 350
Query: 281 YSQQGDYGKALYYFRKLNMQGK------KADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
Y Q +AL FR++ M+G K + V + SV+AA ++ ++IH Y +
Sbjct: 351 YEQGSCPEEALRLFRQMLMEGNMVGVEVKPNAVTLVSVIAACSRLGASRSASMIHKYAVA 410
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RNIITYNSVILGLGLHGFTYQAF 392
G + ++SAL+DM +KCG + G QVF M E R +++++S+I G+HG +A
Sbjct: 411 TGLDQDARIASALIDMCAKCGDIEHGRQVFSEMDESTRTVVSWSSMIGAEGIHGEGKRAL 470
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
E F ++ G P+E T+ ++L AC H GLV G+ F M ++YG+ +HY +V L
Sbjct: 471 ELFSEMRTGGYEPNEITYISVLSACSHAGLVEQGKSCFNSMEKDYGMSPTGKHYACLVDL 530
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG+L+EA++ I ++P D A+ G+LL+ CH++GN L EIV ++ D +
Sbjct: 531 LGRAGHLDEAHNVILNMPIKADLALWGSLLAACHLHGNCKLGEIVEKKILSLDSNSVGHH 590
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+L+N Y + GRWDDV+++R ++ +GLRK G S++
Sbjct: 591 VLLANMYEDAGRWDDVVRMRVELRRSGLRKIPGQSFI 627
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 63/133 (47%), Gaps = 3/133 (2%)
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S+ H D W++LI + Q AL +F ++ ++ ++L A A + P
Sbjct: 12 SISHKDTFHWNSLIAKNATQNPQ-TALTFFTRMQAHAVPSNNFTFPALLKACAALRRLLP 70
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER--NIITYNSVILGL 382
+H Y+ + G ++ALVD Y KCG+ QVF+ M E +++++ ++I
Sbjct: 71 TLQVHAYLTRLGLAADRFSAAALVDAYGKCGHAYYAAQVFDEMPEGSVDVVSWTALISAY 130
Query: 383 GLHGFTYQAFEFF 395
+G +AF F
Sbjct: 131 SSNGCVDEAFXAF 143
>gi|297821463|ref|XP_002878614.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324453|gb|EFH54873.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 588
Score = 271 bits (692), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 273/541 (50%), Gaps = 30/541 (5%)
Query: 34 LLRDPFYATKLVRLYALNN--VLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSL 91
L+ DPF +++L+ AL+ L + + F WN IR ++ + DA
Sbjct: 6 LVLDPFASSRLIAFCALSESRYLNYCVKILKGIENPNAFSWNVTIRGFSESENPKDAVLA 65
Query: 92 FKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG------LGRDSITS 142
+K +LR + +PD+FTY + + C++ LR G ++ G L S
Sbjct: 66 YKQMLRRGCCESRPDHFTYPVLFKVCAD------LRLNSLGHMILGHVFKLRLELVSHVH 119
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A + ++ ++ A KVFD DLV N +I+G+ G +K+++++ M G
Sbjct: 120 NASIHMFASCGEMENARKVFDESPVRDLVSWNCLINGYKKIGEGEKAIEVYKVMESEGVK 179
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ T++GL+S L+ G+ + + + +++ L+ M+++C ++ A +
Sbjct: 180 PDDVTMIGLVSSCAMLGDLNRGKEFYEYVKANGLRMTIPLANALMDMFSKCGDIHEARRI 239
Query: 263 FNSLF-------------HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
F++L D+V W+A+I G Q AL F+++ D + +
Sbjct: 240 FDNLEKRTIVSKLFDDMEEKDVVMWNAMIGGSVQAKRSQDALALFQEMQTSNTDPDEITM 299
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
L+A ++ + G IH Y+ +H L+V + ++LVDMY+KCG + + VF +
Sbjct: 300 IHCLSACSQLGALDVGIWIHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQT 359
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
RN +TY ++I GL LHG A +F ++I+ G+ PDE TF LL ACCHGG++ GR+
Sbjct: 360 RNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDY 419
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F++M + + + +HY MV LLG AG LEEA + S+P D AV GALL C ++G
Sbjct: 420 FSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADKLMESMPMEADAAVWGALLFGCRMHG 479
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N L E A +L E DP V+L Y E W+D + R + + G+ K G S +
Sbjct: 480 NVKLGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSI 539
Query: 550 S 550
Sbjct: 540 E 540
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 45/110 (40%), Gaps = 11/110 (10%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + K SL + T LV +YA + A +F R+ + +II AL
Sbjct: 318 IHRYIEKHSLSLNVALGTSLVDMYAKCGNISEALCVFHGIQTRNSLTYTAIIGGLALHGD 377
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+ A S F ++ + PD T+ + AC HGG I +G
Sbjct: 378 ASTAISYFNEMIDAGIAPDEITFIGLLSAC-----------CHGGMIQTG 416
>gi|116312013|emb|CAJ86370.1| OSIGBa0117N13.14 [Oryza sativa Indica Group]
gi|116312056|emb|CAJ86420.1| H0303G06.9 [Oryza sativa Indica Group]
Length = 559
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 270/543 (49%), Gaps = 2/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+L+ S + + K +H VA AS D +TKL+ YA + +AR +FD P R
Sbjct: 17 LLQCCISSCAFRQGKSVHGRVAAASASPPDLHLSTKLIIFYARFGDVAAARKMFDGMPHR 76
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
SV W +++ YA R +A LF + + +P+ FTY AC+ VH
Sbjct: 77 SVVSWTAMVSGYARNGRPREALELFALMRASGARPNQFTYGSAASACAGAGCARSGEQVH 136
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
A D SAL+ + + +++A ++F + D+V N++I GF G
Sbjct: 137 ACAAKGRFAGDMFVQSALMDMHLRCGSVEDARQLFAEMGKKDVVSWNALIRGFVERGHDG 196
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+L LF ML+ PD YTL + + + IH +K + V L+
Sbjct: 197 DALGLFSSMLKEAMIPDHYTLGSALKACGIVGVAVNVELIHSCIIKLGYWDEKVVIGSLI 256
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADP 306
+ YA+C M+SA +++S+ PDLV+ +ALI+GY+ +Y + A+ F K++ +G D
Sbjct: 257 NSYAKCRSMSSARVIYDSISEPDLVSSTALISGYTMDRNYSEDAMELFCKIHRKGLWIDG 316
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
VL++SVL A A+ G IH Y+ + + + +ALVDMY+K G + F+
Sbjct: 317 VLLSSVLCLCASVASARFGTQIHAYMCKKQSMGDIALDNALVDMYAKAGEFSDAKRAFDE 376
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M RN+I++ S+I G +G A F ++E G+ P++ TF +LL AC H GL N G
Sbjct: 377 MPYRNVISWTSLITACGRNGSGEDAVTLFNRMVEDGVRPNDVTFLSLLSACGHCGLTNKG 436
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
E FT M YGI + EHY + LL G LE+A+ + + ++ GA+L C
Sbjct: 437 MEYFTSMMSRYGIDPRAEHYSSAIDLLARGGQLEDAWKLVQKTNLKPNSSMLGAMLGACK 496
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++GN L E A LF DP +L+N YAE W+D + R+ I + KE G
Sbjct: 497 LHGNMLLGETAAKNLFSIDPGSSVNYAVLANMYAECSLWEDAQRTREVIDETTDGKEVGF 556
Query: 547 SWV 549
S +
Sbjct: 557 SVI 559
>gi|125555946|gb|EAZ01552.1| hypothetical protein OsI_23585 [Oryza sativa Indica Group]
Length = 530
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 259/513 (50%), Gaps = 33/513 (6%)
Query: 71 LW--NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
LW N +IR A F +++ +L L D+FTY + RA R H
Sbjct: 14 LWECNVLIRTLARRGSFARVMAVYYDLRARGLVADSFTYPFVLRAVGVLKLSVEGRKAHA 73
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI +G D+ T S+L+ Y+ L +D A KVFD + LVL N M+ + CG +
Sbjct: 74 AAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRCGRYSA 133
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH-------GF----------- 230
++ L + M R G TPD TLV ++ LS+G+ IH GF
Sbjct: 134 AVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVANALLDM 193
Query: 231 -----CLKSSFDSYDYVS-------SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
CL+ + ++ + ++LVS Y ++ A +FN DL+ W+A+I
Sbjct: 194 YTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMI 253
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
Q G + +AL FR + MQ + D + ++L A + G IH Y Q +
Sbjct: 254 NACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMK 313
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+ ++ +AL+DMYSKCG++ ++VF M R+ + ++I GL +G +A E F+D+
Sbjct: 314 IDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDM 373
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ PD TF +L ACCHGGLV++GR+ F M E Y I+ + EHY +V LLG AG
Sbjct: 374 QRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGL 433
Query: 459 LEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L+EA I +P D + GALL+ C +GN +++E + ++ E D + +++SN
Sbjct: 434 LDEAERLIGDVPINKDAMPLFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSN 493
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
YA RW+DV+++R + ++K AG S +
Sbjct: 494 VYATASRWEDVIRVRGKMAHPTVKKTAGCSLIE 526
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/445 (23%), Positives = 183/445 (41%), Gaps = 64/445 (14%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++ HA K D + + L+ +Y + + AR +FD+ P R++ LWN ++R Y
Sbjct: 69 RKAHAAAIKTGFRWDAYTGSSLMEMYTMLGRVDIARKVFDEMPSRALVLWNMMVRCYIRC 128
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH---------GGAIVS 133
R++ A +L + + R+ + PD T ACS DL R +H + +
Sbjct: 129 GRYSAAVALSEQMERSGVTPDRVTLVTAVTACSRARDLSLGRRIHVYMDNVFGFNLPVAN 188
Query: 134 GL---------------------GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
L R+ I+ + LV+ Y +D+A +F+ + DL+L
Sbjct: 189 ALLDMYTKNDCLEEAVKLFEQMPARNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLIL 248
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
+MI+ G ++++L LF M PD +T+V L++ L G+ IH +
Sbjct: 249 WTAMINACVQHGCFEEALTLFRDMQMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAE 308
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ + + L+ MY++C + + VF + D W+A+I G + G G+AL
Sbjct: 309 QRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALE 368
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F+ + K D V VL+A HG ++ G + A+ ++Y
Sbjct: 369 LFQDMQRSKVKPDGVTFIGVLSACC-----------HGGLVDEGRKQ----FHAMREVYQ 413
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI-IEKGLNPDESTFS 411
E + Y+ ++ LG G +A D+ I K P F
Sbjct: 414 ---------------IEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMP---LFG 455
Query: 412 ALLCACCHGGLVNDGREIFTRMTEE 436
ALL AC G V + R+ E+
Sbjct: 456 ALLTACKAHGNVEMSERLTKRICEQ 480
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 136/292 (46%), Gaps = 5/292 (1%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
R+ T LV Y L L AR+LF++ ++ + LW ++I A F +A +LF+++
Sbjct: 213 RNIISWTILVSGYGLAGQLDKARVLFNQCKEKDLILWTAMINACVQHGCFEEALTLFRDM 272
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+++PD FT + C+ L ++H A + D++ +AL+ YSK I
Sbjct: 273 QMQRVEPDRFTVVTLLTCCANLGALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHI 332
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+++++VF + D ++I G A G ++L+LF M R PD T +G++S
Sbjct: 333 EKSLEVFWRMQGRDATAWTAIICGLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSAC 392
Query: 216 WEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPD-LV 272
L+ G+ H + S LV++ R ++ A + + + D +
Sbjct: 393 CHGGLVDEGRKQFHAMREVYQIEPRVEHYSCLVNLLGRAGLLDEAERLIGDVPINKDAMP 452
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV--LIASVLAAAAKSANV 322
+ AL+T G+ + +++ Q + V L+++V A A++ +V
Sbjct: 453 LFGALLTACKAHGNVEMSERLTKRICEQDSQITDVNLLMSNVYATASRWEDV 504
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + + +H + + D T L+ +Y+ + + +F + R W +II
Sbjct: 296 ALDQGEWIHQYAEQRKMKIDAVLGTALIDMYSKCGHIEKSLEVFWRMQGRDATAWTAIIC 355
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
A + A LF+++ R+++KPD T+ + AC + G + H V +
Sbjct: 356 GLATNGQAGRALELFQDMQRSKVKPDGVTFIGVLSACCHGGLVDEGRKQFHAMREVYQIE 415
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGV 165
S LV + L+DEA ++ V
Sbjct: 416 PRVEHYSCLVNLLGRAGLLDEAERLIGDV 444
>gi|359477376|ref|XP_002280144.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 642
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 179/602 (29%), Positives = 300/602 (49%), Gaps = 61/602 (10%)
Query: 9 VLELSKSHQSLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+L + + ++L K +HA L+ ++S+ F KL+RLY+ A +FD+ Q
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ +LW S+I Y ++++A SLF + R + NFT + + +A + + G + V+
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + G D I ++++ + + +D A + FD + + D+V N MISG+ + D
Sbjct: 125 GFVLKYGFAFDLIVQNSVLDLFMRCRKVDTARQAFDEMCEKDIVSWNMMISGYGNNDRVD 184
Query: 188 KSLQLFDWM---------------LRLGKTPDEYTLVG------------LISGLWE--- 217
+ + FD M ++ G + L ++SG +
Sbjct: 185 IARKFFDRMPERNVVSWTSMICGYVKAGDMAEAQVLFDSMPVKDLASWNVMVSGYMDIGD 244
Query: 218 ---PSLLSVGQGIH----------GFC----LKSSFDSYDYVSS-------VLVSMYARC 253
++ IH GFC L+S+ D +D + + +++ Y +
Sbjct: 245 CVNARIIFGKMPIHDTGSWNIMISGFCKAGELESAKDFFDRMPNKNVISWGIMLDGYIKN 304
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
N A +F+ + +LVTWS +I GY++ G KAL F + Q K D I ++
Sbjct: 305 GDTNGARCLFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDETFILGII 364
Query: 314 AAAAKSANVWPG-AVIHGYVIQHGFEL--SVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+A ++ + ++IH YV G L + V ++L+DMY+KCG + +Q+FE +
Sbjct: 365 SACSQLGIIDAAESIIHNYV---GPSLLSDLRVFTSLIDMYAKCGSIEKALQMFEMAHPK 421
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++ Y+++I L HG A F + + PD TF +L AC HGGLV++GR+ F
Sbjct: 422 DLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVDEGRKYF 481
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
+MTEE+GIQ +HY +V LLG G LEEAY+ I ++P V GALL+ C ++ N
Sbjct: 482 KQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAACRVHCN 541
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
LAE+ A +LF+ +P ++LSN YA GRW V K+R I ++ +RK G SW+
Sbjct: 542 VQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNRGSSWIE 601
Query: 551 GS 552
S
Sbjct: 602 LS 603
>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Cucumis sativus]
Length = 776
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/503 (30%), Positives = 268/503 (53%), Gaps = 17/503 (3%)
Query: 48 YALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTY 107
+A N + AR +FD+ ++ WN ++ AY R DA+ LF + + ++ ++
Sbjct: 163 FAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEI----VSW 218
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
C+ L R + V RD I+ + ++T Y++ L+ EA ++F+ +
Sbjct: 219 NCLMGGYVRKKRLDDARSLFDRMPV----RDKISWNIMITGYAQNGLLSEARRLFEELPI 274
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
D+ +M+SGF G D++ ++F+ M +E + +I+G + + + +
Sbjct: 275 RDVFAWTAMVSGFVQNGMLDEATRIFEEM----PEKNEVSWNAMIAGYVQSQQIEKAREL 330
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
+ S++ +V+ YA+C ++ A +F+ + D ++W+A+I+GY+Q G
Sbjct: 331 FDQMPSRNTSSWN----TMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQS 386
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
+AL+ F K+ G + +A L++ A+ A + G +HG +++ GF+ + +AL
Sbjct: 387 EEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNAL 446
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+ MY KCG + VFE ++E++I+++N++I G HGF +A F + ++ + PD+
Sbjct: 447 LAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALF-ESMKMTIKPDD 505
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
T +L AC H G V+ G E F M + YGI A +HY M+ LLG AG L+EA + +
Sbjct: 506 VTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMK 565
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
S+P D A GALL I+G+++L E A ++FE +P V+LSN YA GRW +
Sbjct: 566 SMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWRE 625
Query: 528 VMKLRDDIVDNGLRKEAGVSWVS 550
V ++R + D G++K G SWV
Sbjct: 626 VREMRSKMRDKGVKKVPGYSWVE 648
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 182/405 (44%), Gaps = 45/405 (11%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+RD F T +V + N +L A +F++ P+++ WN++I Y + + A+ LF
Sbjct: 274 IRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQQIEKARELF-- 331
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+P R++ + + +VT Y++
Sbjct: 332 -----------------------DQMP--------------SRNTSSWNTMVTGYAQCGN 354
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
ID+A +FD + D + +MISG+A G +++L LF M R G + L +S
Sbjct: 355 IDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSS 414
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
E + L +G+ +HG +K+ F + + L++MY +C + A+ VF + D+V+W
Sbjct: 415 CAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSW 474
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ +I GY++ G +AL F + M K D V + VL+A + + V G + Q
Sbjct: 475 NTMIAGYARHGFGKEALALFESMKMT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQ 533
Query: 335 -HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAF 392
+G + + ++D+ + G L + + ++M + T+ +++ +HG T
Sbjct: 534 NYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGDTELGE 593
Query: 393 EFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREIFTRMTEE 436
+ + E + PD S LL G + RE+ ++M ++
Sbjct: 594 KAAEKVFE--MEPDNSGMYVLLSNLYAASGRWREVREMRSKMRDK 636
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 136/276 (49%), Gaps = 15/276 (5%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q + + +EL + R+ +V YA + A+ILFD+ PQR W ++I
Sbjct: 322 QQIEKARELFDQMPS----RNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMI 377
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA + + +A LF + R + AC +C+E + L + +HG + +G
Sbjct: 378 SGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQ 437
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
I +AL+ Y K I+EA VF+ +++ D+V N+MI+G+A GF ++L LF+ M
Sbjct: 438 TGYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESM 497
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-----SVLVSMYA 251
++ PD+ TLVG++S V +G+ F S + +Y + + ++ +
Sbjct: 498 -KMTIKPDDVTLVGVLSACSHTGF--VDKGMEYF--NSMYQNYGITANAKHYTCMIDLLG 552
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
R ++ A ++ S+ F+PD TW AL+ GD
Sbjct: 553 RAGRLDEALNLMKSMPFYPDAATWGALLGASRIHGD 588
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 195/449 (43%), Gaps = 79/449 (17%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
+ + Y SA +F+ +RS +N++I Y ++F+ A+ +F+ +
Sbjct: 64 NRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKM------ 117
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD RD I+ + +++ Y K + A +
Sbjct: 118 PD---------------------------------RDLISWNVMLSGYVKNGNLSAARAL 144
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
F+ + + D+V N+M+SGFA GF +++ ++FD ML +E + GL+S + +
Sbjct: 145 FNQMPEKDVVSWNAMLSGFAQNGFVEEARKIFDQML----VKNEISWNGLLSAYVQNGRI 200
Query: 222 SVGQGIHGFCLKSSFDS---YDYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
+ + FDS ++ VS + L+ Y R ++ A +F+ + D ++W+ +
Sbjct: 201 EDARRL--------FDSKMDWEIVSWNCLMGGYVRKKRLDDARSLFDRMPVRDKISWNIM 252
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA-----SVLAAAAKSANVWP-------G 325
ITGY+Q G +A F +L ++ A +++ +L A + P
Sbjct: 253 ITGYAQNGLLSEARRLFEELPIRDVFAWTAMVSGFVQNGMLDEATRIFEEMPEKNEVSWN 312
Query: 326 AVIHGYV----IQHGFELSVMVSS-------ALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A+I GYV I+ EL + S +V Y++CG + +F+ M +R+ I+
Sbjct: 313 AMIAGYVQSQQIEKARELFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCIS 372
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ ++I G G + +A F + G + S + L +C + G+++ R+
Sbjct: 373 WAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLV 432
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
+ G Q ++ + G G++EEA+
Sbjct: 433 KA-GFQTGYIAGNALLAMYGKCGSIEEAF 460
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 147/338 (43%), Gaps = 33/338 (9%)
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + + ++AY + + A+ VF+G+ V N+MISG+ +D + ++F+
Sbjct: 59 DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFE--- 115
Query: 198 RLGKTPDEYTLVG--LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYARCN 254
K PD + ++SG + LS + L + D VS + ++S +A+
Sbjct: 116 ---KMPDRDLISWNVMLSGYVKNGNLSAARA-----LFNQMPEKDVVSWNAMLSGFAQNG 167
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF-RKLNMQGKKADPVLIASVL 313
+ A +F+ + + ++W+ L++ Y Q G A F K++ + + ++ V
Sbjct: 168 FVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYVR 227
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A ++ ++ ++M++ Y++ G L ++FE + R++
Sbjct: 228 KKRLDDAR----SLFDRMPVRDKISWNIMITG-----YAQNGLLSEARRLFEELPIRDVF 278
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ +++ G +G +A F ++ EK +E +++A++ + RE+F +M
Sbjct: 279 AWTAMVSGFVQNGMLDEATRIFEEMPEK----NEVSWNAMIAGYVQSQQIEKARELFDQM 334
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
T + MV GN+++A +P+
Sbjct: 335 PSR-----NTSSWNTMVTGYAQCGNIDQAKILFDEMPQ 367
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+++ D+V W+ I+ Y ++G AL SV + + V
Sbjct: 53 STIVDSDIVKWNRKISAYMRKGQCESAL-------------------SVFNGMRRRSTVT 93
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDM-----------YSKCGYLGLGIQVFETMSERNI 372
A+I GY+ + F+ + V + D Y K G L +F M E+++
Sbjct: 94 YNAMISGYLSNNKFDCARKVFEKMPDRDLISWNVMLSGYVKNGNLSAARALFNQMPEKDV 153
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++N+++ G +GF +A R I ++ L +E +++ LL A G + D R +F
Sbjct: 154 VSWNAMLSGFAQNGFVEEA----RKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLF 207
>gi|449522624|ref|XP_004168326.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial-like [Cucumis sativus]
Length = 616
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/551 (30%), Positives = 282/551 (51%), Gaps = 11/551 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
F VL+ + S+ R LH+LV K L+ + KL+R+Y L SAR LFD+ +
Sbjct: 20 FNVLKAAAPVNSIPRDTLLHSLVVKLGLINELSVQNKLLRVYVKCRDLDSARTLFDEMAR 79
Query: 67 RSVFLWNSIIRAYA-------LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
R+V WN++I R + FK +L + PD T+ + R+C +D
Sbjct: 80 RNVVSWNTVICGLVDGGYGGEFKMRQHSIFLYFKKMLMGLVDPDGITFNGLFRSCVVLND 139
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ R +H + G D SA+V Y+K L ++A F + DLVL N M+
Sbjct: 140 VESGRQLHSFVMKIGFDLDCFVGSAVVDFYAKCGLYEDARLAFSCILYRDLVLWNVMLYC 199
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+++++F M G D++T L+S +G+ +H +K SFD
Sbjct: 200 CVFNSLSREAIEVFRLMQLEGFKGDDFTFSSLLSLCKYKGSGELGKQLHCLLIKQSFDLD 259
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLN 298
V+S LV++YA+ + + A VF+ + + V+W+ +I GY Q +YGK A+ FR++
Sbjct: 260 ILVASSLVNVYAKNDNLYDARKVFDEMPTRNSVSWTTMIVGYGQH-EYGKEAVKLFRRML 318
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+ D + AS+L++ ++ +H +I+ GFE + +++ L+ YSKCG +
Sbjct: 319 RKDYCPDELTFASLLSSCGFTSGASELMQVHSCLIKLGFEAFLSINNGLIYAYSKCGIIA 378
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+Q F ++E +++T+ S+I GL L G A + F ++ G+ PD+ F +L AC
Sbjct: 379 AALQCFRLVAEPDLVTWTSIICGLALCGLEKDAVKLFDKMLSYGIRPDKIAFLGVLSACS 438
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
HGG V+ G F MT +Y + +EH ++ LLG AG+L++A+ + S+PK P
Sbjct: 439 HGGFVSMGLHYFNLMTNQYQLVPDSEHLTCLIDLLGRAGSLDQAFDLLKSMPKEAGPDAL 498
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
A + C +GN LA+ F ++P + ++SN YA +GRW DV ++R I D
Sbjct: 499 RAFIRACRTHGNLRLAKRAME--FASEPDEPVNYSLVSNMYASEGRWSDVARMRKLINDR 556
Query: 539 GLRKEAGVSWV 549
+K G+SWV
Sbjct: 557 CEQKTPGLSWV 567
>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 620
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/488 (29%), Positives = 262/488 (53%), Gaps = 2/488 (0%)
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
K Q + F++N + + H ++ + Q ++ Y + ++C ++ L
Sbjct: 7 KKTQHTSFIFNLFPFSQSFYHSLATHQTASVDSFPPQ-PTTHYGYTSLLQSCIDSKALNP 65
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +H G+ + ++ LV Y+ + + A +FD + +L L N +I G+A
Sbjct: 66 GKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAW 125
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G D ++ L+ ML G PD +TL ++ S + G+ IH + +KS ++ +V
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+ MYA+C C+ A VF+ + D V W++++ Y+Q G +++ R++ G
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGV 245
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ + +V++++A A + G IHG+ +HGF+ + V +AL+DMY+KCG + + +
Sbjct: 246 RPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALA 305
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+FE + E+ ++++N++I G +HG A + F D + K PD TF +L AC G L
Sbjct: 306 LFERLREKRVVSWNAIITGYAMHGLAVGALDLF-DKMRKEDRPDHITFVGVLAACSRGRL 364
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
+++GR ++ M +YGI +HY M+ LLG G L+EAY I ++ D V GALL
Sbjct: 365 LDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALL 424
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
+ C I+GN +LAE+ +L E +P V+L+N YA+ G+W+ V KLR ++D ++K
Sbjct: 425 NSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRIKK 484
Query: 543 EAGVSWVS 550
SW+
Sbjct: 485 NIACSWIE 492
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/394 (33%), Positives = 209/394 (53%), Gaps = 5/394 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L+ K+LHA + + ATKLV LYA++N L +AR LFDK P++++FLWN +I
Sbjct: 61 KALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKIPKQNLFLWNVLI 120
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
R YA ++A L+ +L L+PDNFT + +ACS S + R +H I SG
Sbjct: 121 RGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWE 180
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
RD +AL+ Y+K + +A +VFD + D VL NSM++ +A G D+S+ L M
Sbjct: 181 RDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQNGHPDESISLCREM 240
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G P E TLV +IS + + L G+ IHGF + F S D V + L+ MYA+C +
Sbjct: 241 AANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVKTALIDMYAKCGSV 300
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F L +V+W+A+ITGY+ G AL F K+ + + D + VLAA
Sbjct: 301 KVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKE-DRPDHITFVGVLAAC 359
Query: 317 AKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIIT 374
++ + G ++ +++ +G +V + ++D+ CG L + MS + +
Sbjct: 360 SRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGV 419
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+ +++ +HG A +IE L PD+S
Sbjct: 420 WGALLNSCKIHGNVELAELALEKLIE--LEPDDS 451
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 12/301 (3%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F L F VL+ + ++ + +H V K+ RD F L+ +YA + A +FD
Sbjct: 149 FTLPF-VLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFD 207
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
K R LWNS++ AYA +++ SL + + ++P T + + ++ + LP
Sbjct: 208 KIVVRDAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPY 267
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R +HG G + +AL+ Y+K + A+ +F+ + + +V N++I+G+A
Sbjct: 268 GREIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAM 327
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +L LFD M R PD T VG+++ LL G+ ++ ++ Y
Sbjct: 328 HGLAVGALDLFDKM-RKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVR----DYGIT 382
Query: 243 SSV-----LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+V ++ + C ++ AY + ++ PD W AL+ G+ A K
Sbjct: 383 PTVQHYTCMIDLLGHCGQLDEAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEK 442
Query: 297 L 297
L
Sbjct: 443 L 443
>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 624
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/432 (33%), Positives = 236/432 (54%)
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
+L +R VH +G R+ ++ L+ Y + +++A ++FDG+S + ++
Sbjct: 65 NLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSVIVG 124
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
G+A G + +F +LR G D+Y+ +I + L G+ IH LK D
Sbjct: 125 GYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDY 184
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+V + LV MYARC + A+ +F ++ DL TW+ +I ++ G ++L +F ++
Sbjct: 185 GHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMR 244
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
QG D V + +V+ A AK + IH Y+ G+ L V++ +A++DMY+KCG +
Sbjct: 245 NQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVE 304
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+F+ M RN+IT++++I G HG +A E F ++ G+ P+ TF +LL AC
Sbjct: 305 SARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACS 364
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H GL+ +G+ F+ M +EYG+ +HY MV LLG AG L+EA I +P D +
Sbjct: 365 HAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLW 424
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
GALL C I+ + DLAE VA L + +K + V+LSN YA G+W+D+ K RD +
Sbjct: 425 GALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKG 484
Query: 539 GLRKEAGVSWVS 550
GLRK G +W+
Sbjct: 485 GLRKIPGRTWIE 496
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 175/373 (46%), Gaps = 2/373 (0%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S ++L + +++HA +A R+ A KL+ +Y L A+ LFD +R + W+
Sbjct: 62 SCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGMSKRHPYSWSV 121
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
I+ YA F +F+ LLR+ D+++ + RAC + DL R +H + G
Sbjct: 122 IVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCG 181
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L + LV Y++ ++++A ++F + DL MI A G +SL FD
Sbjct: 182 LDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFD 241
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PD+ LV ++ + ++ + IH + + + + + ++ MYA+C
Sbjct: 242 RMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCG 301
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ SA +F+ + +++TWSA+I Y G KAL F + G + + S+L
Sbjct: 302 SVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLY 361
Query: 315 AAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNI 372
A + + + G + ++G V + +VD+ + G L +++ E M E++
Sbjct: 362 ACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDE 421
Query: 373 ITYNSVILGLGLH 385
+ + +++ +H
Sbjct: 422 VLWGALLGACRIH 434
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 135/319 (42%), Gaps = 12/319 (3%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+V+ + + L + +H + K L F LV +YA V+ A +F K +R
Sbjct: 156 VVIRACRDLKDLKCGRLIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKR 215
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W +I A A + ++ F + + PD + AC++ + + +H
Sbjct: 216 DLATWTVMIGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIH 275
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+G D I +A++ Y+K ++ A +FD + +++ ++MI+ + + G +
Sbjct: 276 AYINGTGYSLDVILGTAMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGE 335
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-- 245
K+L+LF MLR G P+ T V L+ L+ GQ S +D Y V
Sbjct: 336 KALELFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRF----FSSMWDEYGVTPDVKH 391
Query: 246 ---LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQ 300
+V + R ++ A + + D V W AL+ A R L +Q
Sbjct: 392 YTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQ 451
Query: 301 GKKADP-VLIASVLAAAAK 318
+K VL++++ A A K
Sbjct: 452 SQKPGHYVLLSNIYANAGK 470
>gi|15233292|ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein [Arabidopsis thaliana]
gi|332643073|gb|AEE76594.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 820
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 277/523 (52%), Gaps = 11/523 (2%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
++D F + + +YA + S+R +FD +R++ +WN++I Y ++ LF
Sbjct: 248 VKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 307
Query: 95 LLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD--SITSSALVTAYSK 151
+ + ++ D TY A S + R HG VS R+ + ++L+ YS+
Sbjct: 308 AIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHG--FVSKNFRELPIVIVNSLMVMYSR 365
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
+ ++ VF + + D+V N+MIS F G D+ L L M + G D T+ L
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF--NSLFHP 269
+S +G+ H F ++ ++ ++S L+ MY++ + + +F +
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSYLIDMYSKSGLIRISQKLFEGSGYAER 484
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D TW+++I+GY+Q G K FRK+ Q + + V +AS+L A ++ +V G +H
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
G+ I+ + +V V+SALVDMYSK G + +F ERN +TY ++ILG G HG
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+A F + E G+ PD TF A+L AC + GL+++G +IF M E Y IQ +EHY +
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCI 664
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVDPA-VSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
+LG G + EAY F+ L + + A + G+LL C ++G +LAE V+ +L + D K
Sbjct: 665 TDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGK 724
Query: 509 G--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y+V+LSN YAE+ +W V K+R + + GL+KE G S +
Sbjct: 725 NFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGI 767
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 199/383 (51%), Gaps = 18/383 (4%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP------DNFTYACIT 111
R +FD +++V WN++I Y R +A F ++R ++KP + F I+
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSIS 227
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
R+ + + GL G V +D S+ ++ Y++L I+ + +VFD + ++
Sbjct: 228 RSIKKANVFYGLMLKLGDEYV----KDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGK---TPDEYTLVGLISGLWEPSLLSVGQGIH 228
+ N+MI + +S++LF + +G DE T + S + + +G+ H
Sbjct: 284 VWNTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFH 341
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
GF K+ + + + L+ MY+RC ++ ++ VF S+ D+V+W+ +I+ + Q G
Sbjct: 342 GFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDD 401
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+ L ++ QG K D + + ++L+AA+ N G H ++I+ G + M +S L+
Sbjct: 402 EGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLI 460
Query: 349 DMYSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
DMYSK G + + ++FE +ER+ T+NS+I G +G T + F FR ++E+ + P+
Sbjct: 461 DMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPN 520
Query: 407 ESTFSALLCACCHGGLVNDGREI 429
T +++L AC G V+ G+++
Sbjct: 521 AVTVASILPACSQIGSVDLGKQL 543
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 178/373 (47%), Gaps = 15/373 (4%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ--LKPDNFTYACITRAC 114
AR LFD P+ + LWN+II + + ++A + + +T D +TY+ +AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY-SKLSL-----IDEAIKVFDGVSDP 168
+E +L + VH I + ++L+ Y S L+ D KVFD +
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
++V N++IS + G ++ + F M+R+ P + V + + + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 229 GFCLKSSFDSYD---YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
G LK D Y +V S +SMYA + S+ VF+S ++ W+ +I Y Q
Sbjct: 238 GLMLKLG-DEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQND 296
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA--NVWPGAVIHGYVIQHGFELSVMV 343
+++ F + + K+ + +LAA+A SA V G HG+V ++ EL +++
Sbjct: 297 CLVESIELFLEA-IGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
++L+ MYS+CG + VF +M ER+++++N++I +G + ++ ++G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 404 NPDESTFSALLCA 416
D T +ALL A
Sbjct: 416 KIDYITVTALLSA 428
>gi|255556729|ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541465|gb|EEF43015.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 615
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/564 (30%), Positives = 294/564 (52%), Gaps = 22/564 (3%)
Query: 4 NLH-FLVLELSKSHQSLSRTKELHALVAKASLLRD----PFYA--TKLVRLYALNNVLPS 56
N H F L L S +S+ K++HA + KA+ R P + TK+ L + L
Sbjct: 23 NFHEFPQLLLLSSCKSVREIKQIHASIIKANTTRSTTTLPIISLCTKITSLLQQDVHLAD 82
Query: 57 -------ARILFDKTPQRSVFLWNSIIRAYALAHR-FNDAKSLFKNLLRTQLKPDNFTYA 108
A L + Q V+++N+II++ + ++ F SL++ +L L PD +T
Sbjct: 83 SIQNLWYASSLANFCHQNPVYIFNAIIQSLSTSNNTFTHIFSLYRQMLLIGLSPDTYTLP 142
Query: 109 CITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP 168
+ +ACS++ +H +I +GL + + L+ Y+ I+ KVFD
Sbjct: 143 YLLKACSQSHAFIEALQIHAHSIKTGLSSNLFVKNTLMRFYAVSGFIEAVEKVFDQGPHW 202
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
DL+ ++I ++ G+ +++ F R+ T D TLV ++S + ++G+ I
Sbjct: 203 DLISWTTLIQAYSKMGYPSEAIAAF---FRMNCTADRMTLVVVLSACSQLGDFTLGKKIL 259
Query: 229 GFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+ FD + ++ + L+ MY +C + A +F+ + +LV+W+++I+G + QG
Sbjct: 260 AYMDHHLFDVHSDVFLGNALLDMYLKCGQPHLARQLFHLMPVKNLVSWNSMISGLAHQGL 319
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ +AL+ FR++ G K D V + VL + A ++ G +H Y+ ++ + V++A
Sbjct: 320 FKEALHMFRRMQTMGLKPDSVTLVGVLNSCANLGDLELGKWVHSYIDKNHMKADGYVANA 379
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
LVDMY+KCG + VF+ M +++ +Y ++I+G +HG +A F ++ G+ PD
Sbjct: 380 LVDMYAKCGSIDQAFMVFQAMKCKDVYSYTAMIVGFAMHGKADRALAIFSEMPRMGVRPD 439
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
T +L AC H GL+ +GR F M+ Y +Q +TEHY MV LLG AG + EA +F
Sbjct: 440 HVTLVGVLSACSHAGLLEEGRRHFQDMSRLYHLQPQTEHYGCMVDLLGRAGLISEAEAFT 499
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP-RKGAYKVMLSNTYAEDGRW 525
+P D +V G+LL C I+ +L E V +L E +P R GAY +++SN Y+ RW
Sbjct: 500 NKMPIVPDASVWGSLLGACKIHAKVELGETVIQKLIEMEPERDGAY-ILMSNIYSSANRW 558
Query: 526 DDVMKLRDDIVDNGLRKEAGVSWV 549
D +K R + N ++K G S +
Sbjct: 559 RDALKWRKAMKQNNIKKTPGCSSI 582
>gi|414879990|tpg|DAA57121.1| TPA: putative NAC domain and pentatricopeptide repeat containing
protein [Zea mays]
Length = 1467
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/554 (30%), Positives = 278/554 (50%), Gaps = 32/554 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQRSVFLWNSIIR 77
+ K+LHA + + L + +K++RLYAL+ L SA +F + + FLWN+++R
Sbjct: 854 MEAVKKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLR 913
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A + DA +K +KPDN T+ + +AC++ +H I G
Sbjct: 914 GLAQSDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLL 973
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D S++L+ Y+ + A VF+ + D+V NS+I G++ + L LF M
Sbjct: 974 DIFVSNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQ 1033
Query: 198 RLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHG---------------FCLKSSFD 237
D+ T+V +IS G W + V H +C
Sbjct: 1034 AEEVQADKVTMVKVISACTHLGDWSMADCMVRYIEHNHIEVDVYLGNTLIDYYCRIGQLQ 1093
Query: 238 SYDYVSS-----------VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
S + V S +++ YA+ + SA +F+ + + DL++WS++I YSQ
Sbjct: 1094 SAEKVFSQMKDKNTVTLNAMITAYAKGGNLVSAKKIFDQIPNKDLISWSSMICAYSQASH 1153
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ +L FR++ K D V+IASVL+A A + G IH YV ++ + ++ ++
Sbjct: 1154 FSDSLELFRQMQRAKVKPDAVVIASVLSACAHLGALDLGKWIHDYVRRNNIKADTIMENS 1213
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+DM++KCG + +QVF M E++ +++NS+ILGL +GF +A + F ++ +G P+
Sbjct: 1214 LIDMFAKCGCVQEALQVFTDMEEKDTLSWNSIILGLANNGFEDEALDIFHSMLTEGPRPN 1273
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
E TF +L AC + LV +G + F RM + ++ + +HY +V +L AG LE+A SFI
Sbjct: 1274 EVTFLGVLIACANRQLVEEGLDHFERMKSVHNLEPQMKHYGCVVDILSRAGQLEKAVSFI 1333
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
+P DP V LL C +GN +AE+ +L E DP A ++LSN YA RW
Sbjct: 1334 SEMPLAPDPVVWRILLGACRTHGNVAVAEMATKKLSELDPGNSADSMLLSNIYASADRWS 1393
Query: 527 DVMKLRDDIVDNGL 540
D M +R DN +
Sbjct: 1394 DAMNVRRWTADNAV 1407
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 192/426 (45%), Gaps = 37/426 (8%)
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S T+ TA S A+KVFD P + + ++H F ++L LF R
Sbjct: 418 SSTAPVPATARSSTPPSRTALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLFK-HAR 472
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
D + ++ G +H ++ F+ + YV + L+++Y C+
Sbjct: 473 QHLADDTFVFTFVLKACAGLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYVMSRCLVE 532
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGD-------------------------------Y 287
A VF+ + ++V+W+ +ITG++ G+ Y
Sbjct: 533 ARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDGYTRACLY 592
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
+AL R + G + + +V+ A + + G +++GY + G V ++L
Sbjct: 593 AEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSDARVGNSL 652
Query: 348 VDMYSKCGYLGLGIQVFETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
+D+Y+K G + ++VF+ M RN++++ S+I G +HG + +A E F ++ G+ P+
Sbjct: 653 IDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMRRAGIKPN 712
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
TF +++ AC HGGLV G F M EY I + +H+ ++ +LG AG L EA I
Sbjct: 713 RITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQII 772
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
LP V+ V LL CC YG + E + + + G +LSN E GR+
Sbjct: 773 EGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLERESGGDFAVLSNVLTELGRFS 832
Query: 527 DVMKLR 532
D + R
Sbjct: 833 DAEQAR 838
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 190/438 (43%), Gaps = 56/438 (12%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
L+ K ++ D L+ LYA + +V S ++ + +R++ W SII +A+
Sbjct: 633 LNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHG 692
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFV--------------HG 128
+A LF + R +KP+ T+ + ACS + GL F H
Sbjct: 693 LSVEALELFAEMRRAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHF 752
Query: 129 GAIVSGLGRDSITSSA---------------------LVTAYSKLSLIDEAIKVFDGV-- 165
G I+ LGR A + Y ++++ + AIK+ +
Sbjct: 753 GCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAMGERAIKMISDLER 812
Query: 166 -SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
S D + +++++ +++ +L D + +V L + +++
Sbjct: 813 ESGGDFAVLSNVLTELGRFSDAEQARKLLD----------QRKIVKL-----QEAVMEAV 857
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYA-RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
+ +H + S + Y S ++ +YA + + SA+ VF + P W+ L+ G +Q
Sbjct: 858 KKLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQ 917
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
A+ +++K +G K D + VL A AK+ G +H +VI+ GF L + V
Sbjct: 918 SDAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQMHNHVIKLGFLLDIFV 977
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S++L+ +Y+ CG L VF M ++++++NS+I G H + F+ + + +
Sbjct: 978 SNSLIYLYAACGALACARSVFNEMLVKDVVSWNSLIGGYSQHNRLKEVLTLFKLMQAEEV 1037
Query: 404 NPDESTFSALLCACCHGG 421
D+ T ++ AC H G
Sbjct: 1038 QADKVTMVKVISACTHLG 1055
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 168/384 (43%), Gaps = 52/384 (13%)
Query: 39 FYATKLVRLYALNNVLPSARIL--FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
+ +T V A ++ PS L FD++P W + ++AY+ +A LFK+
Sbjct: 417 YSSTAPVPATARSSTPPSRTALKVFDQSPAP----WRAFLKAYSHGPFPLEALHLFKHA- 471
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGA------IVSGLGRDSITSSALVTAYS 150
R L D F + + +AC+ GL + GA + G + +AL+ Y
Sbjct: 472 RQHLADDTFVFTFVLKACA------GLGWHRAGAQLHALVVQKGFEFHAYVHTALINVYV 525
Query: 151 KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD---------W------ 195
+ EA KVFD + ++V N MI+GFA G + + LFD W
Sbjct: 526 MSRCLVEARKVFDEMPVKNVVSWNVMITGFAGWGEVEYARLLFDQMPCRNVVSWTGLIDG 585
Query: 196 ----------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
M+ G +P E T++ +I + + +G+ ++G+C K S
Sbjct: 586 YTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISNLGGILMGEMLNGYCEKKGIMSD 645
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
V + L+ +YA+ + ++ VF+ + +LV+W+++I+G++ G +AL F ++
Sbjct: 646 ARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTSIISGFAMHGLSVEALELFAEMR 705
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G K + + SV+ A + V G A V ++ + + ++DM + G L
Sbjct: 706 RAGIKPNRITFLSVINACSHGGLVEQGLAFFKSMVYEYNIDPEIKHFGCIIDMLGRAGRL 765
Query: 358 GLGIQVFETMSERNIITYNSVILG 381
Q+ E + +T ++LG
Sbjct: 766 CEAEQIIEGLPMEVNVTVWRILLG 789
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 171/404 (42%), Gaps = 36/404 (8%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR+LFD+ P R+V W +I Y A + +A +L ++++ + P T + A S
Sbjct: 564 ARLLFDQMPCRNVVSWTGLIDGYTRACLYAEALTLLRHMMAGGISPSEITVLAVIPAISN 623
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNS 175
+ ++G G+ D+ ++L+ Y+K+ + ++KVFD + D +LV S
Sbjct: 624 LGGILMGEMLNGYCEKKGIMSDARVGNSLIDLYAKIGSVQNSLKVFDEMLDRRNLVSWTS 683
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
+ISGFA G ++L+LF M R G P+ T + +I+ L V QG+ F KS
Sbjct: 684 IISGFAMHGLSVEALELFAEMRRAGIKPNRITFLSVINACSHGGL--VEQGLAFF--KSM 739
Query: 236 FDSYDYVSSV-----LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYG- 288
Y+ + ++ M R + A + L ++ W L+ S+ G+
Sbjct: 740 VYEYNIDPEIKHFGCIIDMLGRAGRLCEAEQIIEGLPMEVNVTVWRILLGCCSKYGEVAM 799
Query: 289 --KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG--------------------A 326
+A+ L + D ++++VL + ++
Sbjct: 800 GERAIKMISDLERES-GGDFAVLSNVLTELGRFSDAEQARKLLDQRKIVKLQEAVMEAVK 858
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYS-KCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
+H +++ G S ++ +Y+ L +VF+ + +N+++ GL
Sbjct: 859 KLHAHLVVSGLHNCQYAMSKVIRLYALHQSDLVSAHKVFKQIESPTTFLWNTLLRGLAQS 918
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
A F++ EKG+ PD TF +L AC +G ++
Sbjct: 919 DAPKDAIVFYKKAQEKGMKPDNLTFPFVLKACAKTCAPKEGEQM 962
>gi|15229194|ref|NP_190540.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183401|sp|Q9M2Y7.1|PP274_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49710
gi|6723416|emb|CAB66909.1| putative protein [Arabidopsis thaliana]
gi|332645058|gb|AEE78579.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 721
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 172/541 (31%), Positives = 277/541 (51%), Gaps = 17/541 (3%)
Query: 25 LHALVAKASLLRDPFYATK---------LVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
L++ + S R FY+T+ +V+ YA ++ + AR LFD+ PQ +N++
Sbjct: 52 LYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTL 111
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I YA A A LFK + + + D FT + + AC + DL ++ +H ++ G
Sbjct: 112 ISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDL--IKQLHCFSVSGGF 169
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFD 194
S ++A VT YSK L+ EA+ VF G+ + D V NSMI + K+L L+
Sbjct: 170 DSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYK 229
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M+ G D +TL +++ L L G+ HG +K+ F +V S L+ Y++C
Sbjct: 230 EMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCG 289
Query: 255 CMNSAY---HVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPVLIA 310
+ Y VF + PDLV W+ +I+GYS + + A+ FR++ G + D
Sbjct: 290 GCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFV 349
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
V +A + ++ IHG I+ H + V++AL+ +Y K G L VF+ M E
Sbjct: 350 CVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPE 409
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
N +++N +I G HG +A ++ +++ G+ P++ TF A+L AC H G V++G+E
Sbjct: 410 LNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEY 469
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M E + I+ + EHY M+ LLG AG LEEA FI ++P ALL C +
Sbjct: 470 FNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHK 529
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N LAE A++L P VML+N YA+ +W+++ +R + +RK+ G SW+
Sbjct: 530 NMALAERAANELMVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWI 589
Query: 550 S 550
Sbjct: 590 E 590
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
+L + +++ G +H ++ S +S+ V++YSKCG L F + E N
Sbjct: 14 LLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPN 73
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +YN ++ + A + F +I + PD +++ L+ D RE F
Sbjct: 74 VFSYNVIVKAYAKDSKIHIARQLFDEIPQ----PDTVSYNTLISG------YADARETFA 123
Query: 432 RMT 434
M
Sbjct: 124 AMV 126
>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 281/533 (52%), Gaps = 9/533 (1%)
Query: 25 LHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+H ++ K + + D + + + +YA L A+ +FD +R+ +WN++I A+
Sbjct: 208 VHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQN 267
Query: 83 HRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ + LF + ++ D T A S +H I +
Sbjct: 268 NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCV 327
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+AL+ YS+ + ID + K+FD + + D+V N+MIS F G D++L LF M +
Sbjct: 328 MNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDL 387
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D T+ L+S + +G+ HG+ L++ ++ + S L+ MYA+ + +A +
Sbjct: 388 MVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQ-FEGMDSYLIDMYAKSGLIEAAQN 446
Query: 262 VFNSLF--HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF F D TW+++++GY+Q G +A R++ Q + V +AS+L A S
Sbjct: 447 VFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPS 506
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G +HG+ I++ + +V V++AL+DMYSK G + VF +E++I+TY+++I
Sbjct: 507 GYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMI 566
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
LG G HG A F + + G+ PD T A+L AC + GLV++G +IF M Y I
Sbjct: 567 LGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNI 626
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVA 498
Q TEH+ + +LG AG +++AY F+ L + + + G+LL+ C I+ +L ++VA
Sbjct: 627 QPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVA 686
Query: 499 HQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L E + G Y V+LSN YAE+ W++V +R + + GL+KE G SW+
Sbjct: 687 KKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWI 739
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 198/379 (52%), Gaps = 10/379 (2%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
R +FD +R+V WN++I Y R+ +A F +++ +KP ++ + A S
Sbjct: 140 RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSL 199
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITS----SALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
D VHG ++ LG + + S+ + Y++L ++ A KVFD + + +
Sbjct: 200 GDFKNANVVHG--MLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 257
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+MIS F F + +QLF + DE TL+ IS + + +H F +
Sbjct: 258 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 317
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
K+ + V + L++MY+RCN +++++ +F+++ D+V+W+ +I+ + Q G +AL
Sbjct: 318 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALM 377
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ Q D V + ++L+AA+ N G HGY++++G + M S L+DMY+
Sbjct: 378 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDMYA 436
Query: 353 KCGYLGLGIQVFET--MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
K G + VFE ER+ T+NS++ G +G QAF R ++++ + P+ T
Sbjct: 437 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 496
Query: 411 SALLCACCHGGLVNDGREI 429
+++L AC G ++ G+++
Sbjct: 497 ASILPACNPSGYIDWGKQL 515
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 216/468 (46%), Gaps = 23/468 (4%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT---QLKPDNFTYACITRA 113
AR LFD P+ S LWN+II + + F D LF + +++ Q+K D++TY+ + +A
Sbjct: 23 ARQLFDALPRPSTVLWNTIIIGL-VCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKA 81
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL-------------SLIDEAIK 160
C++ +L + VH + + I ++L+ YS S D K
Sbjct: 82 CADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRK 141
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VFD + +V N++I+ + + ++++ F M+++G P + V +
Sbjct: 142 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGD 201
Query: 221 LSVGQGIHGFCLK--SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+HG +K S + + YV S + MYA C+ A VF++ + W+ +I
Sbjct: 202 FKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMI 261
Query: 279 TGYSQQGDYGKALY-YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
+ + Q + + +F+ + + D V + S ++AA+ +H +VI++
Sbjct: 262 SAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVA 321
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
V V +AL+ MYS+C + ++F+ M E++++++N++I +G +A F +
Sbjct: 322 VTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYE 381
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ ++ L D T +ALL A + G++ + GIQ + Y++ + +G
Sbjct: 382 MKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRN-GIQFEGMDS-YLIDMYAKSG 439
Query: 458 NLEEAYS-FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
+E A + F S D A +++S G D A ++ Q+ +
Sbjct: 440 LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQ 487
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 51/454 (11%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q ++LHA V K + L+ +Y+ N + ++ +FD P++ V WN++I
Sbjct: 304 QKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMI 363
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A+ ++A LF + + L D+ T + A S+ + + HG + +G+
Sbjct: 364 SAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQ 423
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDG--VSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + S L+ Y+K LI+ A VF+ + D NSM+SG+ G D++ +
Sbjct: 424 FEGM-DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILR 482
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
ML P+ TL ++ + G+ +HGF +++ D +V++ L+ MY++
Sbjct: 483 QMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSG 542
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ A +VF+ +VT+S +I GY Q G AL+ F ++ G + D V + +VL+
Sbjct: 543 SIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLS 602
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL---GIQVFETMS--- 368
A C Y GL G+Q+FE+M
Sbjct: 603 A--------------------------------------CSYAGLVDEGLQIFESMRTVY 624
Query: 369 --ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ + + V LG G +A+EF + EKG N E + +LL AC G
Sbjct: 625 NIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKG-NVME-IWGSLLAACRIHKQFELG 682
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+ + ++ E I KT +++ + + N E
Sbjct: 683 KLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWE 716
>gi|224113417|ref|XP_002316490.1| predicted protein [Populus trichocarpa]
gi|222865530|gb|EEF02661.1| predicted protein [Populus trichocarpa]
Length = 492
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 237/437 (54%)
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C++N + + HG I GL D++TS+ L+ YSK LI A KVFD + + +V
Sbjct: 8 CAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPERSMVSW 67
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N MI G +K++ +F M R G E+T+ ++ + + +H F +K
Sbjct: 68 NIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCRQLHAFAIK 127
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ D+ +V + L+ +YA+C + A VF + + VTWS+++ G+ Q Y + L
Sbjct: 128 AVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNELYEEGLVL 187
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F + G + + +I+SV+ A A A + G +H V + GF + V+SALVDMY+K
Sbjct: 188 FARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVASALVDMYAK 247
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + +F + ++N++ +N++I G H + + F ++ + G+ PDE T+ A+
Sbjct: 248 CGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQPDEVTYVAV 307
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV 473
L AC H GLV+ GR F MT E+ + HY MV +LG G + EA+ + +P
Sbjct: 308 LSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLVHEAHELMTKMPFAA 367
Query: 474 DPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
++ G+LL+ C I+GN +LAEI A LFE +P +G V+L+NTYA +W++ K R
Sbjct: 368 TASMWGSLLASCRIHGNLELAEIAAKNLFEMEPDRGGNYVLLANTYAASKKWEEAAKARK 427
Query: 534 DIVDNGLRKEAGVSWVS 550
+ + + KE G SW+
Sbjct: 428 SLKGSEILKERGKSWIE 444
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 171/354 (48%), Gaps = 2/354 (0%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
LH L+ +K+ + ++ K H V + L D + L+ +Y+ ++ A +FD+
Sbjct: 1 LHSLLQFCAKNREPIT-GKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEI 59
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P+RS+ WN +I A +F + R FT + + AC+ D+ R
Sbjct: 60 PERSMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDVFFCR 119
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H AI + + D +AL+ Y+K I++A VF+G+ + + V +S+++GF
Sbjct: 120 QLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERNDVTWSSIVAGFVQNE 179
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+++ L LF +G +++ + +I + L G+ +H ++ F ++V+S
Sbjct: 180 LYEEGLVLFARGKEMGLENNQFMISSVIRACAGLAALIEGRQVHAIVCRTGFGPNNFVAS 239
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
LV MYA+C + AY +F ++ ++V W+A+I+G+++ + + F ++ G +
Sbjct: 240 ALVDMYAKCGSIEEAYVLFCNIEKKNVVLWNAIISGFAKHACSSEVMNLFEEMQQTGMQP 299
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYL 357
D V +VL+A V G + +H +V+ S +VD+ + G +
Sbjct: 300 DEVTYVAVLSACVHVGLVDKGRSYFDLMTREHNVSPNVLHYSCMVDILGRGGLV 353
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L AK+ G HG VI+ G E + S+ L++MYSKCG + +VF+ + ER
Sbjct: 3 SLLQFCAKNREPITGKACHGQVIRLGLETDTLTSNMLMNMYSKCGLIRRACKVFDEIPER 62
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++++N +I +G +A + F ++ +G E T S+++CAC G V F
Sbjct: 63 SMVSWNIMIGTCVQNGEEEKAIDIFLEMQREGSPCSEFTVSSVVCACAAKGDV-----FF 117
Query: 431 TRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKPVD 474
R + I+A + ++ ++ + G++E+A +P+ D
Sbjct: 118 CRQLHAFAIKAVVDADVFVGTALIDVYAKCGSIEDASCVFEGMPERND 165
>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
Length = 981
Score = 270 bits (691), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 163/543 (30%), Positives = 277/543 (51%), Gaps = 3/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
++ + S S +H+L ++SL LV +Y+ L A LF +R
Sbjct: 252 LMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSRRD 311
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I +Y DA L T P++ T++ ACS L + VH
Sbjct: 312 LISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALIDGKMVHA 371
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ L R+ + ++L+T Y K + +++A KVF + D+V N +I G+A K
Sbjct: 372 IVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYAVLEDGTK 431
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPS--LLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++Q+F W+ G P+ T++ I G + S L + G+ +H + +++ F S +YV++ L
Sbjct: 432 AMQVFSWIRSAGIKPNYITMIN-IHGSFTSSNDLHNYGRPLHAYIIRTGFLSDEYVANSL 490
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MYA+C + S+ ++FNS+ + ++V+W+A+I +Q G +AL F + G K D
Sbjct: 491 ITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKLFIDMQHAGNKLDR 550
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V +A L++ A A++ G +HG ++ G + V +A +DMY KCG + +Q+
Sbjct: 551 VCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAMDMYGKCGKMNEMLQMVPD 610
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ R +N++I G +G+ +A E F+ ++ G PD TF ALL AC H GLV+ G
Sbjct: 611 QAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYVTFVALLSACSHAGLVDKG 670
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+ + M +G+ +H + +V LLG G EA FI +P + + +LLS
Sbjct: 671 IDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEEMPVLPNDLIWRSLLSSSR 730
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+ N ++ A +L E DP + V+LSN YA + RW DV KLR + + K
Sbjct: 731 THKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDVDKLRSHMKTININKRPAC 790
Query: 547 SWV 549
SW+
Sbjct: 791 SWL 793
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 196/383 (51%), Gaps = 2/383 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HAL +A L+ + + T L+ LY ++ AR LF + P+R+V W +++ A +
Sbjct: 66 IHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGY 125
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRAC-SENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ ++ + R + + +A + C S +++PGL+ V IVSGL ++
Sbjct: 126 LEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQ-VASHVIVSGLQNQVSVAN 184
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+T + L + +A K+FD + + D + N+MIS ++H G K +F M G P
Sbjct: 185 SLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRP 244
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D TL L+S S G GIH CL+SS DS V + LV+MY+ ++ A +F
Sbjct: 245 DATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLF 304
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
++ DL++W+ +I+ Y Q + AL +L + + + +S L A + +
Sbjct: 305 WNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACSSPGALI 364
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H V+Q + +++V ++L+ MY KC + +VF++M ++++YN +I G
Sbjct: 365 DGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYNVLIGGYA 424
Query: 384 LHGFTYQAFEFFRDIIEKGLNPD 406
+ +A + F I G+ P+
Sbjct: 425 VLEDGTKAMQVFSWIRSAGIKPN 447
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/395 (25%), Positives = 179/395 (45%), Gaps = 11/395 (2%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
A L+ ++ + A LFD+ + N++I Y+ + +F ++ L
Sbjct: 183 ANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGL 242
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS-----ALVTAYSKLSLI 155
+PD T + C+ F HG I S R S+ SS ALV YS +
Sbjct: 243 RPDATTLCSLMSVCASAD-----HFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A +F +S DL+ N+MIS + +L+ + + P+ T +
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
P L G+ +H L+ S V + L++MY +CN M A VF S+ D+V+++
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYN 417
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQ 334
LI GY+ D KA+ F + G K + + + ++ + S ++ G +H Y+I+
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLHAYIIR 477
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF V+++L+ MY+KCG L +F +++ +NI+++N++I G +A +
Sbjct: 478 TGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGEEALKL 537
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
F D+ G D + L +C + +G ++
Sbjct: 538 FIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQL 572
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 129/300 (43%), Gaps = 4/300 (1%)
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL---LSVGQGIHGFC 231
+ +SG CG + +L M G + L L++ ++ G IH
Sbjct: 11 TAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALT 70
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
++ Y+ + L+ +Y ++ A +F + ++V+W+AL+ S G + L
Sbjct: 71 HRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEMPERNVVSWTALMVALSSNGYLEETL 130
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
+R++ +G + A+V++ N PG + +VI G + V V+++L+ M+
Sbjct: 131 RAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVSVANSLITMF 190
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
G + ++F+ M E + I+ N++I G + F F D+ GL PD +T
Sbjct: 191 GNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLC 250
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+L+ C + G I + + + + +V + AG L +A W++ +
Sbjct: 251 SLMSVCASADHFSHGSGIHS-LCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR 309
>gi|357128066|ref|XP_003565697.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g56570-like [Brachypodium distachyon]
Length = 564
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 159/516 (30%), Positives = 267/516 (51%), Gaps = 10/516 (1%)
Query: 40 YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ 99
+AT L++ L AR +FD+ P R V W +++ YA + A LF+ +L
Sbjct: 5 HATTLIKSLCAGGALRHARAVFDEMPDRDVVAWTAMLSGYASNGCHSYALDLFRRMLAAG 64
Query: 100 LKPDNFTYACITRACSENSDLPGLR--FVHGGAIVSGLGRDSITSSALVTAYSKLSL--- 154
+ P+ FT + + AC + G +H A+ G+ +AL+ AY+
Sbjct: 65 VGPNEFTLSSVLTACRGGAADGGCEPSSLHAVAVRRGVDHMPYVVNALIEAYASCEEGVG 124
Query: 155 IDEAIKVFDGV-SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
++E+ K+FD + S SM++G++ G LQLF M++ G +T +
Sbjct: 125 VEESRKLFDALGSGRTAASWTSMVAGYSRWGQEQTGLQLFQTMIQDGIELSPFTCSIALH 184
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
+ L VGQ +H CL+ +F++ V++ L+ MY C + A +F+ + +LVT
Sbjct: 185 ACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPERNLVT 244
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+ +I YSQ ++ AL R++N+Q + + S+ +A A A++ G +HG +
Sbjct: 245 WNTMIAWYSQ-CNHLMALQLLREMNLQ---PNCFTLTSITSACAGLASLRFGQQVHGAAL 300
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ + + + +ALVDMYSKCG + ++F M ++ +++ S+I G G++G+ ++ +
Sbjct: 301 RRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMNGYANESIQ 360
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F +I G++PD F L+CAC HGGLV++G F MT EY +Q E Y + LL
Sbjct: 361 LFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEIYGCVTNLL 420
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
AG L EA+ I +P D V GALL C ++ N +L + A ++ E +P + V
Sbjct: 421 ARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKIIEINPDRAKTYV 480
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L+N YA +W + R + G RKEAG SW+
Sbjct: 481 LLANIYAAGNKWGEYADTRRLLRGIGSRKEAGTSWI 516
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 150/323 (46%), Gaps = 24/323 (7%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+ L S +L ++LH L + + + A L+ +Y L AR LFD+ P+R
Sbjct: 181 IALHACASIANLCVGQQLHVLCLRKAFNANLTVANSLIDMYCSCANLLDARRLFDEIPER 240
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRF- 125
++ WN++I Y+ + + LLR L+P+ FT IT AC + L LRF
Sbjct: 241 NLVTWNTMIAWYSQCNHL-----MALQLLREMNLQPNCFTLTSITSAC---AGLASLRFG 292
Query: 126 --VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
VHG A+ G+D +ALV YSK I A K+F+ + D + SMI+G+
Sbjct: 293 QQVHGAALRRNYGKDLQMCNALVDMYSKCGSIANAKKMFNMMDYKDKLSWTSMITGYGMN 352
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI-----HGFCLKSSFDS 238
G+ ++S+QLF M+ G PD +GLI L+ G + L+ + +
Sbjct: 353 GYANESIQLFTSMIHAGVHPDHVVFLGLICACNHGGLVDEGWNFFRSMTSEYNLQPNKEI 412
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRK- 296
Y V+++L AR + A+ + + + F PD W AL+ + RK
Sbjct: 413 YGCVTNLL----ARAGRLREAFDLIHRMPFAPDETVWGALLGACKMHKNVELGRLAARKI 468
Query: 297 LNMQGKKADP-VLIASVLAAAAK 318
+ + +A VL+A++ AA K
Sbjct: 469 IEINPDRAKTYVLLANIYAAGNK 491
>gi|20160775|dbj|BAB89716.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
gi|125573261|gb|EAZ14776.1| hypothetical protein OsJ_04704 [Oryza sativa Japonica Group]
Length = 916
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 170/538 (31%), Positives = 274/538 (50%), Gaps = 6/538 (1%)
Query: 16 HQSLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
H L KE+H ++ K + + L+ LY N +ARILF P R + WN+
Sbjct: 380 HGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNT 439
Query: 75 IIRAYALAHRF-NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
+I Y+ +AK++FK LL L T + +C DL + VH +
Sbjct: 440 MISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKY 499
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQL 192
G +++L+ Y A + + ++ D++ N+ I G G + +L+
Sbjct: 500 GFLTGVSAANSLIHMYICCGDSLAAFSLLESITPISDIISWNTAIVGCVQNGLYGDALEA 559
Query: 193 FDWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
F +M L PD TLV ++S L S+G+ IH LK + V + L++MY
Sbjct: 560 FQFMHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYF 619
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
R SA +F+SL +L +W+ +I+G++Q + +A +++K M+ + + + I
Sbjct: 620 RFGDTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRAFQFYKK--MEDFEPNEISIVG 677
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
++ A + ++ G IHG+V++ G + +V +S++LVDMYSKCG L + I+VFE+ +E++
Sbjct: 678 IICACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKS 737
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
I +NS+I G HG ++ E F + G+ STF ALL AC H GL ++G + +
Sbjct: 738 IACWNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYH 797
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M E +GI EH++ +V +LG AG L+EA+ F+ SLP V GALLS C
Sbjct: 798 LMIEHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSEL 857
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ E VA L +P Y V +SN YA W +++RD + D GL K G S +
Sbjct: 858 KMCESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSII 915
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 211/432 (48%), Gaps = 15/432 (3%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L + +SL H + K L D L+ +YA S+ ++F + P R
Sbjct: 169 IMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYR 228
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFV 126
WNS++ + FK ++R+ + D + +C+ ACS DL V
Sbjct: 229 DTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESV 288
Query: 127 HGGAIVSGLGRDSITSS---ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
H I LG + TSS +L+T Y +L + A +VF S+ +LV N+MI G
Sbjct: 289 HSSVI--KLGYEDTTSSVANSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVEN 346
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YV 242
++++ +F M R PD TLV +IS + LL G+ +HG+ +K + V
Sbjct: 347 DRVNEAMCMFQEM-RSKNQPDVATLVTIISACGDHGLLPEGKEVHGYIIKKGHIYEECSV 405
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRKLNMQG 301
+ L+ +Y +CN ++A +F ++ DL++W+ +I+GYS+ G +A F+ L +G
Sbjct: 406 GNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEG 465
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ +V+ + ++ G +H +++++GF V +++L+ MY CG
Sbjct: 466 LSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAF 525
Query: 362 QVFETMSE-RNIITYNSVILGL---GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ E+++ +II++N+ I+G GL+G +AF+F + LNPD T ++L C
Sbjct: 526 SLLESITPISDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLT--LNPDSITLVSVLSVC 583
Query: 418 CHGGLVNDGREI 429
+ L + G+ I
Sbjct: 584 GNLKLQSLGKSI 595
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 210/426 (49%), Gaps = 53/426 (12%)
Query: 19 LSRTKELHALVAKASLLR------------DPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L RT L A V A+ +R DPF +L + ++ A L D+TP+
Sbjct: 2 LRRTPRLLAAVNPATAVRSTAALVQIASPLDPFLLHQLTARF--HHAPADAHHLLDETPR 59
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R+ +SI+RA AC A E +D G+ +
Sbjct: 60 RA----SSIVRALG---------------------------AC-RGASREEAD--GVAAL 85
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGF 185
H A+ SG D ++++TAYS++ + A++VFD + PDL+L N+ IS +C +
Sbjct: 86 HCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRY 145
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D ++ LF WM+ + D ++V ++SG L G HG LK D+ + +
Sbjct: 146 GD-AVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAFHGMALKRCLDTDLSLWNT 204
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MYA+C S+ VF + + D +W+++++G G + YYF+++ +AD
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264
Query: 306 PVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFE-LSVMVSSALVDMYSKCGYLGLGIQV 363
V ++ VL+A + +++ G +H VI+ G+E + V+++L+ Y + G+ +V
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEEV 324
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F + S +N++T+N++I GL + +A F+++ K PD +T ++ AC GL+
Sbjct: 325 FLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDHGLL 383
Query: 424 NDGREI 429
+G+E+
Sbjct: 384 PEGKEV 389
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 226/492 (45%), Gaps = 15/492 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K+ + DP T ++ Y+ + SA +FD+ + LWN+ I A L R
Sbjct: 85 LHCAALKSGAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGRDSITSS 143
+ DA LF+ ++ D+ + + S L G+ F HG A+ L D +
Sbjct: 145 YGDAVVLFRWMVDVLGVIDSTSMVIMLSGASRARSLEHGIAF-HGMALKRCLDTDLSLWN 203
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ Y+K + VF + D NSM+SG G + S F M+R
Sbjct: 204 TLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQA 263
Query: 204 DEYTLVGLISGLWE-PSLLSVGQGIHGFCLKSSF-DSYDYVSSVLVSMYARCNCMNSAYH 261
DE +L ++S L S G+ +H +K + D+ V++ L++ Y +A
Sbjct: 264 DEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVANSLITFYYELGFPEAAEE 323
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF S + +LVTW+A+I G + +A+ F+++ + + D + ++++A
Sbjct: 324 VFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSK-NQPDVATLVTIISACGDHGL 382
Query: 322 VWPGAVIHGYVIQHG--FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G +HGY+I+ G +E V ++L+D+Y KC +F TM R++I++N++I
Sbjct: 383 LPEGKEVHGYIIKKGHIYE-ECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441
Query: 380 LGLGLH-GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
G + +A F+ ++ +GL+ ST A++ +C +N G+ + + + +YG
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFIL-KYG 500
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCH--IYGNSDLA 494
++ + G+ A+S + S+ P+ +S A++ C +YG++ A
Sbjct: 501 FLTGVSAANSLIHMYICCGDSLAAFSLLESI-TPISDIISWNTAIVGCVQNGLYGDALEA 559
Query: 495 EIVAHQLFENDP 506
H +P
Sbjct: 560 FQFMHSTLTLNP 571
>gi|297833228|ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330336|gb|EFH60755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 547
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 279/534 (52%), Gaps = 19/534 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS------ARILFD 62
+L ++ +S+ +LH L+ K+S++R+ L RL P AR +F+
Sbjct: 8 ILSQLENCRSMVELNQLHGLMIKSSVIRN---VIPLSRLIDFCTTCPETMNLSYARSVFE 64
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
SV++WNS+IR Y+ + + A ++ +LR PD FT+ + +ACS D+
Sbjct: 65 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 124
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VHG + +G + S+ L+ Y ++ ++VF+ + ++V S+ISGF +
Sbjct: 125 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNWGLRVFEDIPKLNVVAWGSLISGFVN 184
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+ +++ F M +G P+E +V L L++ G+ +C +S F+ +
Sbjct: 185 NNRFSDAIEAFREMQSIGVKPNETIMVDL--------LVACGRCFDPYC-QSKFEFNVIL 235
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
++ L+ MYA+C M +A ++F+ + +LV+W+++ITGYSQ GD +A+ F + G
Sbjct: 236 ATSLIDMYAKCGDMRTARYLFDGMPERNLVSWNSIITGYSQNGDAEEAMCMFSDMLDLGI 295
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D V SV+ A+ G IH YV + GF + ALV+MY+K G +
Sbjct: 296 APDKVTFFSVIRASMIQGCSQLGQTIHAYVSKTGFVKDAAIVCALVNMYAKTGNAESAKK 355
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGG 421
+FE + +++ I + VI+GL HG +A F+ + E+G PD T+ +L AC H G
Sbjct: 356 MFEDLEKKDTIAWTVVIIGLASHGHGNKALSIFQRMQEEGNATPDGITYLGVLYACSHIG 415
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV +G+ F M + YG++ EHY MV +L AG EEA + ++P + GAL
Sbjct: 416 LVEEGQRYFAEMRDLYGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVQPTANIWGAL 475
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
L+ C I+ N DLA+ + + E++ V+LSN YA+ GRW DV +R+ +
Sbjct: 476 LNGCEIHENLDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRESM 529
>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Vitis vinifera]
Length = 891
Score = 270 bits (690), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 171/540 (31%), Positives = 276/540 (51%), Gaps = 5/540 (0%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
K+ +L +++H K + F A L+ +Y+ AR LFD P R + WN
Sbjct: 226 KACGTLVDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWN 285
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I A + + +K + T I C + D+ +H I
Sbjct: 286 AMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKH 345
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL D S+AL+ Y+K +++A K F + D+V NS+I+ + + F
Sbjct: 346 GLEFDLFVSNALINMYAKFGNLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFF 405
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYAR 252
M G PD TLV L S + + + +HGF ++ + D V + +V MYA+
Sbjct: 406 VKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAK 465
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV--LIA 310
++SA+ VF + D+++W+ LITGY+Q G +A+ ++ + + K+ P
Sbjct: 466 LGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMME-ECKEIIPNQGTWV 524
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A A + G IHG VI+ L V V++ L+D+Y KCG L + +F + +
Sbjct: 525 SILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQE 584
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+ +T+N++I G+HG + + F +++++G+ PD TF +LL AC H G V +G+ F
Sbjct: 585 SSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCF 644
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
R+ +EYGI+ +HY MV LLG AG LE AY FI +P D ++ GALL C I+GN
Sbjct: 645 -RLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGACRIHGN 703
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L + + +LFE D + Y V+LSN YA G+W+ V K+R + GL+K G S +
Sbjct: 704 IELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIE 763
Score = 201 bits (511), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/513 (26%), Positives = 267/513 (52%), Gaps = 16/513 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LHAL+ A ++ F +T+LV LYA + +R FD+ PQ+ V+ WNS+I AY
Sbjct: 136 KCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHN 195
Query: 83 HRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
F++A F LL ++++PD +T+ + +AC D R +H A G +
Sbjct: 196 GHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRKIHCWAFKLGFQWNVFV 252
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++L+ YS+ A +FD + D+ N+MISG G ++L + D M G
Sbjct: 253 AASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGI 312
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ T+V ++ + +S IH + +K + +VS+ L++MYA+ + A
Sbjct: 313 KMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFGNLEDARK 372
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F +F D+V+W+++I Y Q D A +F K+ + G + D + + S+ + A+S +
Sbjct: 373 AFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRD 432
Query: 322 VWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+HG++++ G+ + V++ +A+VDMY+K G L +VFE + +++I++N++I
Sbjct: 433 CKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLIT 492
Query: 381 GLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A E ++ + E K + P++ T+ ++L A H G + G +I R+ + +
Sbjct: 493 GYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKT-NL 551
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYGNSDLAEIVA 498
++ + G G L +A S + +P+ + +V+ A++SC I+G+++ +
Sbjct: 552 HLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQ--ESSVTWNAIISCHGIHGHAEKTLKLF 609
Query: 499 HQLFEN--DPRKGAYKVMLS----NTYAEDGRW 525
++ + P + +LS + + E+G+W
Sbjct: 610 GEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKW 642
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 150/298 (50%), Gaps = 4/298 (1%)
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
++ P + +H +V+G + S+ LV Y+ L + + FD + D+ NSM
Sbjct: 129 STKTPFAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSM 188
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
IS + H G + +++ F +L + + PD YT ++ L G+ IH + K
Sbjct: 189 ISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLG 245
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
F +V++ L+ MY+R A +F+ + D+ +W+A+I+G Q G+ +AL
Sbjct: 246 FQWNVFVAASLIHMYSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLD 305
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ ++G K + V + S+L + ++ +IH YVI+HG E + VS+AL++MY+K G
Sbjct: 306 EMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKFG 365
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
L + F+ M +++++NS+I + A FF + G PD T +L
Sbjct: 366 NLEDARKAFQQMFITDVVSWNSIIAAYEQNDDPVTAHGFFVKMQLNGFQPDLLTLVSL 423
>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 592
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/432 (35%), Positives = 241/432 (55%), Gaps = 2/432 (0%)
Query: 120 LPGLRFVHGGAIVSGLGRD-SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
L L+ +H I++GLGR S+ + L AY+ S I ++F + PD L +S+I+
Sbjct: 32 LKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLIT 91
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
+ F +SL + ML + YT +I + + S+G+ IH +
Sbjct: 92 LTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGYGL 151
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
YV + LVS YA+ + A VF+ + +V W+++I+GY Q G +A+ F +
Sbjct: 152 DAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQ 211
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
G K D S+L+A A+ + G +H Y+ ++ F+L+V++ +AL++MYS+CG +
Sbjct: 212 DLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCGNVS 271
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+VF++M E+NI+ + ++I G G+HG QA E F ++ G P+ TF A+L AC
Sbjct: 272 KAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLSACA 331
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSL-PKPVDPAV 477
H GLV++GR+IFT M +EYG+ EH + MV +LG AG+L EAY FI + PK PAV
Sbjct: 332 HAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKEPAPAV 391
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
A+L C ++ N DL VA L +P + VMLSN YA GR D V K+R+ ++
Sbjct: 392 WTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKIRNIMIR 451
Query: 538 NGLRKEAGVSWV 549
N L+KE G S +
Sbjct: 452 NRLKKEVGYSTI 463
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/358 (28%), Positives = 182/358 (50%), Gaps = 8/358 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRL-YALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L +++HA + L R TKL+ YA + + R LF P+ FL++S+I
Sbjct: 32 LKPLQQIHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSIPKPDTFLFHSLI- 90
Query: 78 AYALAHRFN-DAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
L +F+ +SL ++ +L + N+T++ + ++ ++ + +H + G
Sbjct: 91 --TLTSKFSFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICG 148
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
G D+ +ALV+ Y+K + A KVFD + + +V NSMISG+ GF ++++LF
Sbjct: 149 YGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFF 208
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M LG PD T V L+S + + +G +H + ++ FD + + L++MY+RC
Sbjct: 209 LMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRCG 268
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ A VF+S+ ++V W+A+I+GY G +A+ F +++ G + + V +VL+
Sbjct: 269 NVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVAVLS 328
Query: 315 AAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
A A + V G I + Q +G SV +VDM + G+L Q + S +
Sbjct: 329 ACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPKE 386
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 124/269 (46%), Gaps = 15/269 (5%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ T H + L D + LV YA + + AR +FDK P+++V WNS+I
Sbjct: 135 SIGETIHCHVYICGYGL--DAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMIS 192
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLG 136
Y +A LF + +KPD+ T+ + AC++ + GL F VH +
Sbjct: 193 GYEQNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAI-GLGFWVHEYIARNCFD 251
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ + +AL+ YS+ + +A +VFD + + ++V +MISG+ G ++++LF+ M
Sbjct: 252 LNVVLGTALMNMYSRCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEM 311
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYA 251
G P+ T V ++S L+ G+ I + Y V SV +V M
Sbjct: 312 SFDGPRPNNVTFVAVLSACAHAGLVDEGRQI----FTTMKQEYGLVPSVEHQVCMVDMLG 367
Query: 252 RCNCMNSAYHVF--NSLFHPDLVTWSALI 278
R +N AY S P W+A++
Sbjct: 368 RAGHLNEAYQFIKNTSPKEPAPAVWTAML 396
>gi|302765581|ref|XP_002966211.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
gi|300165631|gb|EFJ32238.1| hypothetical protein SELMODRAFT_85415 [Selaginella moellendorffii]
Length = 969
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 170/517 (32%), Positives = 266/517 (51%), Gaps = 11/517 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VLE S L K +HA V ++ L D LV +YA + AR +FD+ R
Sbjct: 423 MVLEACGSLAELKGGKLVHAHVIESGLEGD-LVGISLVNMYAKCGTVGEARKVFDRINNR 481
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
S LWNS+I AY ++A LF+ + + PD T+ + AC +DL R +H
Sbjct: 482 SRILWNSMITAYQ-EKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIH 540
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ SG D ++AL Y+K + EA VFD + D+V N+MI+ + +
Sbjct: 541 TRIVDSGFAADVRVATALFNMYAKCGSLGEARGVFDSMVFRDVVSWNNMIAAYVQGRDGE 600
Query: 188 KSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ L W ++L G PD+ T L++ +P+ L G+ IH + +S ++ + + L
Sbjct: 601 GAISLC-WAMQLEGMRPDKATFTSLLNACSDPNRLVDGRQIHSWIAESRLENDIVMVTGL 659
Query: 247 VSMYARCNCMNSAYHVFNSLF------HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
++MYA C +N+A +F+++F H DL W+++IT Y Q G+Y KAL + +++ +
Sbjct: 660 ITMYANCGSLNNAREIFDNIFSNSRQHHRDLFLWTSMITAYEQHGEYRKALELYEQMHSR 719
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+AD V SVL A A +++ G IH V++ G V V++++V MY KCG
Sbjct: 720 QVEADRVTFISVLNACAHLSDLRQGQAIHARVMRRGLATDVAVANSIVFMYGKCGSFDEA 779
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
VFE ++I + ++I HG QA FR + + G+ TF A+L AC H
Sbjct: 780 SIVFEKTKHKDISLWTALIASYARHGHGEQALWIFRRLRQDGIELSNLTFVAMLSACSHV 839
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GL+ +G E F M E GI+ EH+ +V LL AG+L A F+ +P + V A
Sbjct: 840 GLIEEGCEFFASMA-ELGIEPNMEHHSCLVDLLARAGHLHTAEEFLSRMPVAANTIVLTA 898
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
LL+ C ++G+ + A VA +L DP A V LSN
Sbjct: 899 LLAACRVHGDVERARRVAEKLEALDPESEAPYVTLSN 935
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 131/448 (29%), Positives = 227/448 (50%), Gaps = 7/448 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARI-LFDKTPQRSVFLWNSIIR 77
L + +++HALV ++SL A L+ +Y+ +R+ F + +R V W +I
Sbjct: 127 LEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIG 186
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY+ +F+ + LF+ +L P++ T+ I C S L R +H + S L
Sbjct: 187 AYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLES 246
Query: 138 --DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D + + Y K +D A++ F + D+V MI ++ G + SLQLF
Sbjct: 247 HLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFRE 306
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
ML G P+ T V ++SG PSLL G+ IH ++SS +S+ V++ L+ MY+RC
Sbjct: 307 MLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRS 366
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPVLIASVLA 314
+ +F+ + D V+WS +I S++ + + AL +R + +G + ++ VL
Sbjct: 367 WEDSRSLFDRMSVRDSVSWSTIIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLE 426
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A + G ++H +VI+ G E +V +LV+MY+KCG +G +VF+ ++ R+ I
Sbjct: 427 ACGSLAELKGGKLVHAHVIESGLE-GDLVGISLVNMYAKCGTVGEARKVFDRINNRSRIL 485
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS+I ++A FR++ +G++PD TF +L AC + + +GR I TR+
Sbjct: 486 WNSMITAYQ-EKDPHEALHLFREMQPEGVSPDRITFMTVLNACVNAADLENGRTIHTRIV 544
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ G A + + G+L EA
Sbjct: 545 DS-GFAADVRVATALFNMYAKCGSLGEA 571
Score = 185 bits (469), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 129/483 (26%), Positives = 233/483 (48%), Gaps = 11/483 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + +++HALV ++SL A L+ +Y+ +R LFD+ R W++II A
Sbjct: 332 LEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWSTIIMA 391
Query: 79 YALAHRF-NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+ DA L++++L + P + + AC ++L G + VH I SGL
Sbjct: 392 CSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEACGSLAELKGGKLVHAHVIESGLEG 451
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + S LV Y+K + EA KVFD +++ +L NSMI+ + ++L LF M
Sbjct: 452 DLVGIS-LVNMYAKCGTVGEARKVFDRINNRSRILWNSMITAYQEKDP-HEALHLFREMQ 509
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G +PD T + +++ + L G+ IH + S F + V++ L +MYA+C +
Sbjct: 510 PEGVSPDRITFMTVLNACVNAADLENGRTIHTRIVDSGFAADVRVATALFNMYAKCGSLG 569
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+S+ D+V+W+ +I Y Q D A+ + ++G + D S+L A +
Sbjct: 570 EARGVFDSMVFRDVVSWNNMIAAYVQGRDGEGAISLCWAMQLEGMRPDKATFTSLLNACS 629
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM------SERN 371
+ G IH ++ + E +++ + L+ MY+ CG L ++F+ + R+
Sbjct: 630 DPNRLVDGRQIHSWIAESRLENDIVMVTGLITMYANCGSLNNAREIFDNIFSNSRQHHRD 689
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ + S+I HG +A E + + + + D TF ++L AC H + G+ I
Sbjct: 690 LFLWTSMITAYEQHGEYRKALELYEQMHSRQVEADRVTFISVLNACAHLSDLRQGQAIHA 749
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
R+ G+ +V + G G+ +EA S ++ K D ++ AL++ +G+
Sbjct: 750 RVMRR-GLATDVAVANSIVFMYGKCGSFDEA-SIVFEKTKHKDISLWTALIASYARHGHG 807
Query: 492 DLA 494
+ A
Sbjct: 808 EQA 810
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 109/401 (27%), Positives = 198/401 (49%), Gaps = 14/401 (3%)
Query: 31 KASLLRDPFYATKL----------VRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+ L++D T+L + +Y L A F + +R V W +I AY+
Sbjct: 28 EGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYS 87
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+F+ + LF+ +L P++ T+ I C S L R +H + S L +
Sbjct: 88 QDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHVV 147
Query: 141 TSSALVTAYSKL-SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+++L+ YS+ S D ++ F + D+V MI ++ G + S+QLF ML
Sbjct: 148 VANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWTVMIGAYSQDGKFSLSIQLFREMLLE 207
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY-DY-VSSVLVSMYARCNCMN 257
G P+ T V ++SG PSLL G+ IH ++SS +S+ D V ++ ++MY +C C++
Sbjct: 208 GTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVESSLESHLDIGVLNLTINMYVKCGCLD 267
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A F + D+V+W+ +I YSQ G + +L FR++ ++G + V S+L+
Sbjct: 268 GAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCE 327
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G IH V++ E V+V+++L+ MYS+C +F+ MS R+ +++++
Sbjct: 328 APSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRSLFDRMSVRDSVSWST 387
Query: 378 VILGLGLH-GFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+I+ A +R ++ +G+ P S +L AC
Sbjct: 388 IIMACSREDSHCRDALPLYRSMLHEGVMPKTLALSMVLEAC 428
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 174/362 (48%), Gaps = 7/362 (1%)
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
R + PD + AC++ L + + + L D + + Y K +D
Sbjct: 3 RRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGCLD 62
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A++ F + D+V MI ++ G + SLQLF ML G P+ T V ++SG
Sbjct: 63 GAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSGCE 122
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC-MNSAYHVFNSLFHPDLVTWS 275
PSLL G+ IH ++SS +S+ V++ L+ MY+RC +S F + D+V+W+
Sbjct: 123 APSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVSWT 182
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I YSQ G + ++ FR++ ++G + V S+L+ + + G IH V++
Sbjct: 183 VMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVES 242
Query: 336 GFE--LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
E L + V + ++MY KCG L +Q F M R+++++ +I G + +
Sbjct: 243 SLESHLDIGVLNLTINMYVKCGCLDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQ 302
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
FR+++ +G P+ TF ++L C L+ GR+I + E + H + LL
Sbjct: 303 LFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVVE----SSLESHVVVANSLL 358
Query: 454 GL 455
G+
Sbjct: 359 GM 360
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 120/241 (49%), Gaps = 1/241 (0%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M R G PD + L++ + L G+ I + + V ++ ++MY +C C
Sbjct: 1 MDRRGIPPDRVMIKTLLTACTKLGALEEGKLIQDRLAGTQLELDIGVRNLTINMYVKCGC 60
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
++ A F + D+V+W+ +I YSQ G + +L FR++ ++G + V S+L+
Sbjct: 61 LDGAVQTFARMKRRDVVSWTVMIGAYSQDGKFSLSLQLFREMLLEGTAPNSVTFVSILSG 120
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC-GYLGLGIQVFETMSERNIIT 374
+ + G IH V++ E V+V+++L+ MYS+C + +Q F M R++++
Sbjct: 121 CEAPSLLEQGRQIHALVVESSLESHVVVANSLLGMYSRCRSWEDSRMQTFARMKRRDVVS 180
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ +I G + + FR+++ +G P+ TF ++L C L+ GR+I +
Sbjct: 181 WTVMIGAYSQDGKFSLSIQLFREMLLEGTAPNSVTFVSILSGCEAPSLLEQGRQIHALVV 240
Query: 435 E 435
E
Sbjct: 241 E 241
>gi|225440783|ref|XP_002275884.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570 [Vitis vinifera]
Length = 561
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 169/543 (31%), Positives = 280/543 (51%), Gaps = 17/543 (3%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L K+ + S +++HA + + L +D F ++ + L + +F+ S L
Sbjct: 31 LLKACTTTSTLEQVHARIIRKGLHQDHFIISQFLTLCNSLSNFSYTTSVFNGVSSPSTVL 90
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WN+ I+ Y+ + + SLF + R+ PD FTY + +ACS+ + HG A+
Sbjct: 91 WNTYIKGYSENYSVSLTVSLFIRMKRSDAVPDKFTYPSLIKACSKVCGVKEGVAFHGSAV 150
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G+G D ++L+ Y K I A KVFD + + ++V +MI+G+A ++ +
Sbjct: 151 RCGVGGDVFVMTSLIDLYGKCGEILCARKVFDEMGERNVVSWTAMIAGYASFSDLVEARK 210
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV----LV 247
LFD M + + +ISG + L + + FD + + V ++
Sbjct: 211 LFDEM----PEKNAVSWNAIISGYVKCGDLRSARKM--------FDEMPHRNVVSFTTMI 258
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
YA+ M SA VF D+V WSALI+GY Q G +A+ F ++ + K D
Sbjct: 259 DGYAKSGDMASARFVFEEAPERDVVAWSALISGYVQNGQPNEAVKIFLEMCSRNVKPDEF 318
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-SVMVSSALVDMYSKCGYLGLGIQVFET 366
++ S+++A ++ ++ + YV + ++ V +AL+DM +KCG + ++FE
Sbjct: 319 IMVSLMSACSQMGSLELAKWVDDYVRKSSIDVHRAHVIAALIDMNAKCGSMDRATKLFEE 378
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M +R++I+Y S++ GL +HG QA F ++ +GL PD+ F+ +L AC GLV++G
Sbjct: 379 MPKRDLISYCSMMQGLSIHGCGPQAVSLFSRMLNEGLTPDDVAFTVILTACSRAGLVDEG 438
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
F M +Y I +HY MV LLG AG L+EAY + S+P GALL C
Sbjct: 439 CYYFESMKTDYSIVPSPDHYACMVDLLGRAGRLKEAYELLKSMPVEPHAGAWGALLGACK 498
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
++ + +L E+VA QLFE +P+ V+LSN YA +W DV LR+ + + G+RK G
Sbjct: 499 LHCDIELGEVVADQLFELEPQNAGNYVLLSNIYAAAEQWLDVSLLRNKMRERGIRKIPGC 558
Query: 547 SWV 549
SW+
Sbjct: 559 SWI 561
>gi|115473985|ref|NP_001060591.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|22831115|dbj|BAC15976.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|50510078|dbj|BAD30730.1| selenium-binding protein-like protein [Oryza sativa Japonica Group]
gi|113612127|dbj|BAF22505.1| Os07g0670000 [Oryza sativa Japonica Group]
gi|125559550|gb|EAZ05086.1| hypothetical protein OsI_27276 [Oryza sativa Indica Group]
Length = 726
Score = 270 bits (690), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 174/540 (32%), Positives = 273/540 (50%), Gaps = 18/540 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHAL ++ L D F LV Y+ L AR +FD P R + WN++I LA
Sbjct: 151 RQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARDLVSWNALI--CGLA 208
Query: 83 HRFN---DAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + +F +LR ++PD + + AC L R VHG A+ G+
Sbjct: 209 QDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGY 268
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ LV Y K A ++FD +S+ D+V + IS + +L LF+ M R
Sbjct: 269 VSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDG-----EDALTLFNGMRR 323
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G P+E T V L+S L Q +H CLK++ S+ L++MYA+ M+
Sbjct: 324 DGVPPNEVTFVALMSALPADCPARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDD 383
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA--A 316
A VF+ + +++ W+A+I+GY+Q G AL F + + + ASVL+A A
Sbjct: 384 ARMVFDLMPRREIIAWNAVISGYAQNGRCNDALELFSSM-ARCLTPNETTFASVLSAVTA 442
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
++ ++ G + H + GF S V+ AL+DMY+K G L + F +R++I +
Sbjct: 443 VETVSMAYGQMYHSRALSMGFGDSEYVAGALIDMYAKRGNLEESRKAFHETEQRSLIAWT 502
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I HG F D+ G+ PD A+L AC +GG+V+ GR+IF M +
Sbjct: 503 AIISANARHGSYGAVMSLFGDMARSGVAPDGVVLLAVLTACRYGGMVDAGRDIFDSMAAD 562
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIYGNSDLA 494
G++ EHY +V +LG AG L EA + +P P+VS +LL C I+G++++
Sbjct: 563 RGVELWPEHYSCVVDMLGRAGRLAEAEELMMRMP--AGPSVSALQSLLGACRIHGDAEIG 620
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
E +A L E +P + V+LSN YA+ G WD V K+R + D G++KE G SWV +
Sbjct: 621 ERIARILTEKEPTESGAYVLLSNIYADVGDWDGVAKVRRKMRDRGVKKEIGFSWVDAGAG 680
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 181/395 (45%), Gaps = 12/395 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA+ L L YA PSA +F R V +N+I+ A+
Sbjct: 54 LHAVAVTTGLHGFAAVTNSLAARYAKTGSFPSAVGVFAAARARDVSSYNTILSAFPDPAE 113
Query: 85 FNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
D S +LR+ ++PD T + + +R +H A SGL D +
Sbjct: 114 ALDFASW---MLRSGAVRPDAVTCTVALSLAAGRGEGFLVRQLHALAWRSGLAADVFVGN 170
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS-LQLFDWMLRLGKT 202
ALVTAYS+ + EA VFD + DLV N++I G A G + +F MLR G
Sbjct: 171 ALVTAYSRGGSLGEARSVFDDMPARDLVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDV 230
Query: 203 -PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD ++ +I L +G+ +HGF +K + Y + +VLV+MY +C SA
Sbjct: 231 QPDRISVCSVIPACGGEGKLELGRQVHGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARR 290
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+++ D+V+W+ T S G+ AL F + G + V ++++A
Sbjct: 291 LFDAMSERDVVSWT---TAISMDGE--DALTLFNGMRRDGVPPNEVTFVALMSALPADCP 345
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
++H ++ S++L+ MY+K + VF+ M R II +N+VI G
Sbjct: 346 ARGAQMVHAACLKAAVSGEAAASNSLITMYAKARRMDDARMVFDLMPRREIIAWNAVISG 405
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+G A E F + + L P+E+TF+++L A
Sbjct: 406 YAQNGRCNDALELFSS-MARCLTPNETTFASVLSA 439
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 155/328 (47%), Gaps = 31/328 (9%)
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
++ P F+ A RA S+ + LP L H A+ +GL + +++L Y+K A
Sbjct: 33 RVNPIAFSAA--VRA-SDPASLPAL---HAVAVTTGLHGFAAVTNSLAARYAKTGSFPSA 86
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWE 217
+ VF D+ N+++S F ++L WMLR G PD T +S
Sbjct: 87 VGVFAAARARDVSSYNTILSAFPDPA---EALDFASWMLRSGAVRPDAVTCTVALS---- 139
Query: 218 PSLLSVGQG-------IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
L+ G+G +H +S + +V + LV+ Y+R + A VF+ + D
Sbjct: 140 ---LAAGRGEGFLVRQLHALAWRSGLAADVFVGNALVTAYSRGGSLGEARSVFDDMPARD 196
Query: 271 LVTWSALITGYSQQGDYGKAL--YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
LV+W+ALI G +Q GD + + R L + D + + SV+ A + G +
Sbjct: 197 LVSWNALICGLAQDGDCPAEVIGVFLRMLRDGDVQPDRISVCSVIPACGGEGKLELGRQV 256
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
HG+ ++ G E V + + LV MY KCG G ++F+ MSER+++++ + I G
Sbjct: 257 HGFAVKLGVEGYVSIGNVLVAMYYKCGAPGSARRLFDAMSERDVVSWTTAISMDG----- 311
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCA 416
A F + G+ P+E TF AL+ A
Sbjct: 312 EDALTLFNGMRRDGVPPNEVTFVALMSA 339
>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/533 (30%), Positives = 281/533 (52%), Gaps = 9/533 (1%)
Query: 25 LHALVAK--ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+H ++ K + + D + + + +YA L A+ +FD +R+ +WN++I A+
Sbjct: 232 VHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMISAFVQN 291
Query: 83 HRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+ + LF + ++ D T A S +H I +
Sbjct: 292 NFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVAVTQVCV 351
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+AL+ YS+ + ID + K+FD + + D+V N+MIS F G D++L LF M +
Sbjct: 352 MNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYEMKKQDL 411
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
D T+ L+S + +G+ HG+ L++ ++ + S L+ MYA+ + +A +
Sbjct: 412 MVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQ-FEGMDSYLIDMYAKSGLIEAAQN 470
Query: 262 VFNSLF--HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF F D TW+++++GY+Q G +A R++ Q + V +AS+L A S
Sbjct: 471 VFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTLASILPACNPS 530
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G +HG+ I++ + +V V++AL+DMYSK G + VF +E++I+TY+++I
Sbjct: 531 GYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANEKSIVTYSTMI 590
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
LG G HG A F + + G+ PD T A+L AC + GLV++G +IF M Y I
Sbjct: 591 LGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQIFESMRTVYNI 650
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVA 498
Q TEH+ + +LG AG +++AY F+ L + + + G+LL+ C I+ +L ++VA
Sbjct: 651 QPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIHKQFELGKLVA 710
Query: 499 HQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L E + G Y V+LSN YAE+ W++V +R + + GL+KE G SW+
Sbjct: 711 KKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGSSWI 763
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 198/379 (52%), Gaps = 10/379 (2%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
R +FD +R+V WN++I Y R+ +A F +++ +KP ++ + A S
Sbjct: 164 RKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSL 223
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITS----SALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
D VHG ++ LG + + S+ + Y++L ++ A KVFD + + +
Sbjct: 224 GDFKNANVVHG--MLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVW 281
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+MIS F F + +QLF + DE TL+ IS + + +H F +
Sbjct: 282 NTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVI 341
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
K+ + V + L++MY+RCN +++++ +F+++ D+V+W+ +I+ + Q G +AL
Sbjct: 342 KNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALM 401
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ Q D V + ++L+AA+ N G HGY++++G + M S L+DMY+
Sbjct: 402 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGM-DSYLIDMYA 460
Query: 353 KCGYLGLGIQVFET--MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
K G + VFE ER+ T+NS++ G +G QAF R ++++ + P+ T
Sbjct: 461 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 520
Query: 411 SALLCACCHGGLVNDGREI 429
+++L AC G ++ G+++
Sbjct: 521 ASILPACNPSGYIDWGKQL 539
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 110/468 (23%), Positives = 216/468 (46%), Gaps = 23/468 (4%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT---QLKPDNFTYACITRA 113
AR LFD P+ S LWN+II + + F D LF + +++ Q+K D++TY+ + +A
Sbjct: 47 ARQLFDALPRPSTVLWNTIIIGL-VCNNFPDEALLFYSNMKSSSPQVKCDSYTYSSVLKA 105
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL-------------SLIDEAIK 160
C++ +L + VH + + I ++L+ YS S D K
Sbjct: 106 CADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRK 165
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VFD + +V N++I+ + + ++++ F M+++G P + V +
Sbjct: 166 VFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGD 225
Query: 221 LSVGQGIHGFCLK--SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+HG +K S + + YV S + MYA C+ A VF++ + W+ +I
Sbjct: 226 FKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEVWNTMI 285
Query: 279 TGYSQQGDYGKALY-YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
+ + Q + + +F+ + + D V + S ++AA+ +H +VI++
Sbjct: 286 SAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVA 345
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
V V +AL+ MYS+C + ++F+ M E++++++N++I +G +A F +
Sbjct: 346 VTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEALMLFYE 405
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ ++ L D T +ALL A + G++ + GIQ + Y++ + +G
Sbjct: 406 MKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRN-GIQFEGMDS-YLIDMYAKSG 463
Query: 458 NLEEAYS-FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
+E A + F S D A +++S G D A ++ Q+ +
Sbjct: 464 LIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQ 511
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 198/454 (43%), Gaps = 51/454 (11%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q ++LHA V K + L+ +Y+ N + ++ +FD P++ V WN++I
Sbjct: 328 QKFELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMI 387
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A+ ++A LF + + L D+ T + A S+ + + HG + +G+
Sbjct: 388 SAFVQNGLNDEALMLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQ 447
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDG--VSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ + S L+ Y+K LI+ A VF+ + D NSM+SG+ G D++ +
Sbjct: 448 FEGM-DSYLIDMYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILR 506
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
ML P+ TL ++ + G+ +HGF +++ D +V++ L+ MY++
Sbjct: 507 QMLDQKVMPNVVTLASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSG 566
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ A +VF+ +VT+S +I GY Q G AL+ F ++ G + D V + +VL+
Sbjct: 567 SIAHAENVFSKANEKSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLS 626
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL---GIQVFETMS--- 368
A C Y GL G+Q+FE+M
Sbjct: 627 A--------------------------------------CSYAGLVDEGLQIFESMRTVY 648
Query: 369 --ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ + + V LG G +A+EF + EKG N E + +LL AC G
Sbjct: 649 NIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKG-NVME-IWGSLLAACRIHKQFELG 706
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
+ + ++ E I KT +++ + + N E
Sbjct: 707 KLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWE 740
>gi|297740913|emb|CBI31095.3| unnamed protein product [Vitis vinifera]
Length = 768
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/527 (30%), Positives = 260/527 (49%), Gaps = 35/527 (6%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L K D L+ +YA N + SA ++F P+ SV WN +I Y
Sbjct: 243 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK 302
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ + A + + +PD TY + AC ++ D+ R
Sbjct: 303 SQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGR------------------ 344
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++FDG+S P L N+++SG++ ++++LF M
Sbjct: 345 -----------------QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVH 387
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD TL ++S L LL G+ +H K+ F + Y++S L+ MY++C + A +
Sbjct: 388 PDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRI 447
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D+V W++++ G S +A +F+K+ +G A+VL+ AK +++
Sbjct: 448 FDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSL 507
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + + G+ V SAL+DMYSKCG + VF+ M +N +T+N +I G
Sbjct: 508 SQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGY 567
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+G +A + D+I G PD TF A+L AC H GLV+ G +IF M +E+G++
Sbjct: 568 AQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPL 627
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY ++ LG AG L EA I +P DP + LLS C +Y + LA A +LF
Sbjct: 628 VDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELF 687
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP+ A V+L+N Y+ GRWDD +R+ + N + K+ G SW+
Sbjct: 688 HLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWI 734
Score = 171 bits (434), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 231/496 (46%), Gaps = 82/496 (16%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +HA + ++ L D F + +L+ YA N + ++R LFD+ P+R ++ WN+I+ AY A
Sbjct: 25 KLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKA 84
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITR--ACSENSDLPGLRFVHGGAIVSGLGRDSI 140
DA LF + + N + +TR AC D+ R HG +I GL +
Sbjct: 85 SELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVDVECGRRCHGISIKIGLDNNIY 144
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+AL+ Y+K I +AI+ F V +P+ V +M+ G A +++ +LF MLR
Sbjct: 145 VGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMGGLADSDQVNEAFRLFRLMLRNR 204
Query: 201 KTPDEYTLVGLIS----------GLWEPS-LLSV---GQGIHGFCLKSSFDSYDYVSSVL 246
D +L ++ GL + + +LS GQ +H +K F+S ++++ L
Sbjct: 205 IHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDVHGQQVHCLTIKHGFESDLHLNNSL 264
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+ M+SA +F ++ +V+W+ +I GY Q+ KA+ Y +++ G + D
Sbjct: 265 LDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQKSQSSKAIEYLQRMQYHGFEPDE 324
Query: 307 VLIASVLAAAAKSANVWPG----------------AVIHGY------------------- 331
+ ++L A KS ++ G ++ GY
Sbjct: 325 ITYVNMLVACIKSGDIEAGRQMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFR 384
Query: 332 --------------------VIQHGFELSVMVSSAL--VDMYSKCGYLG---------LG 360
+++ G ++ + A+ D+Y G +G +
Sbjct: 385 SVHPDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMA 444
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++F+ ++E +I+ +NS++ GL L+ +AF FF+ + EKG+ P + +++ +L C
Sbjct: 445 KRIFDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKL 504
Query: 421 GLVNDGREIFTRMTEE 436
++ GR++ +++ E
Sbjct: 505 SSLSQGRQVHSQIARE 520
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 171/350 (48%), Gaps = 30/350 (8%)
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
A + + C + + +H + S L D+ S+ L+ Y+K + ID + ++FD +
Sbjct: 9 ASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPK 68
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV--GLISGLWEP----SLL 221
D+ N+++ A+C K+ +L D + + P+ + LIS L +L+
Sbjct: 69 RDIYTWNAILG--AYC----KASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALV 122
Query: 222 SV--GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
V G+ HG +K D+ YV + L+ MYA+C C+ A F + P+ V+++A++
Sbjct: 123 DVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEVSFTAMMG 182
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK---------------SANVWP 324
G + +A FR + D V ++SVL ++ S++V
Sbjct: 183 GLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDVLSSDV-H 241
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H I+HGFE + ++++L+DMY+K G + +F M E +++++N +I G G
Sbjct: 242 GQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQ 301
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ +A E+ + + G PDE T+ +L AC G + GR++F M+
Sbjct: 302 KSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMS 351
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 58/109 (53%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL SLS+ +++H+ +A+ + D F + L+ +Y+ + +AR +FD ++
Sbjct: 497 VLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKN 556
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
WN +I YA ++A L+++++ + KPD T+ + ACS +
Sbjct: 557 TVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHS 605
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 54/116 (46%)
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+AS+L G +IH ++++ +S+ L++ Y+KC + ++F+ M
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+R+I T+N+++ A F ++ E+ + + SAL G LV+
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGACGALVD 123
>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g57430, chloroplastic-like [Cucumis sativus]
Length = 863
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 270/526 (51%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H + K DPF A L+ +YA + +A +F + P+ + WN++I L
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ + A L + ++ P FT + +AC+ + R +H + + DS
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGV 328
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ YSK L+ +A VFD + D+++ NS+ISG+++CG+ +++ LF M + G
Sbjct: 329 GLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLEF 388
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
++ TL ++ + +H +KS + YV++ L+ Y +C + A VF
Sbjct: 389 NQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVF 448
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
DLV ++++IT YSQ G +AL + ++ + K D + +S+ A A +
Sbjct: 449 EVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYE 508
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH +V++ G V ++LV+MY+KCG + +F +S R I++++++I GL
Sbjct: 509 QGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLA 568
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG +A + F +++ G+ P+ T ++L AC H GLV + R F M + +GI
Sbjct: 569 QHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQ 628
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY MV +LG G L+EA + +P AV GALL I+ N +L A L
Sbjct: 629 EHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRHAAEMLLT 688
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P K ++L+N YA G WD+V K+R + ++ ++KE G+SW+
Sbjct: 689 LEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWI 734
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 151/293 (51%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LH+ + K + D F L+ +Y+ +L AR++FD P + V +WNSII Y+
Sbjct: 309 RQLHSALMKMDMEPDSFVGVGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNC 368
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A SLF N+ + L+ + T + I ++ + + VH +I SG D +
Sbjct: 369 GYDIEAMSLFTNMYKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVA 428
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ +Y K L+++A KVF+ DLV SMI+ ++ G +++L+++ M
Sbjct: 429 NSLLDSYGKCCLLEDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIK 488
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD + L + S G+ IH LK S + + LV+MYA+C ++ A +
Sbjct: 489 PDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCI 548
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
FN + +V+WSA+I G +Q G KAL F ++ G + + + SVL+A
Sbjct: 549 FNEISWRGIVSWSAMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSA 601
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 185/426 (43%), Gaps = 42/426 (9%)
Query: 45 VRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDN 104
V LY+ AR L + + + W+++I Y R +A + + K +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 105 FTYACITRACSENSDLP-----------------------------------------GL 123
FT++ + + CS +L G+
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ VHG I G D +++AL+ Y+K + AI VF + PD+V N++I+G
Sbjct: 209 K-VHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLH 267
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
D +L+L M P +TL + L+ +G+ +H +K + +V
Sbjct: 268 EKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVG 327
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
L+ MY++C + A VF+ + D++ W+++I+GYS G +A+ F + +G +
Sbjct: 328 VGLIDMYSKCGLLQDARMVFDLMPXKDVIVWNSIISGYSNCGYDIEAMSLFTNMYKEGLE 387
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ ++++L + A S +H I+ G++ V+++L+D Y KC L +V
Sbjct: 388 FNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKV 447
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
FE +++ Y S+I +G +A + + + ++ + PD FS+L AC +
Sbjct: 448 FEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAY 507
Query: 424 NDGREI 429
G++I
Sbjct: 508 EQGKQI 513
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 103/229 (44%), Gaps = 40/229 (17%)
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V++Y++C C A + PDLV+WSALI+GY Q G +AL + ++ + G K +
Sbjct: 89 VNLYSKCQCFRVARKLVIDSSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGNE 148
Query: 307 VLIASVLAAAAKSANVWPGAVI-------------------------------------- 328
+SVL + + N+ G I
Sbjct: 149 FTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYGM 208
Query: 329 --HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
HGY+I+ G++ ++AL+DMY+K G I VF + + +I+++N+VI G LH
Sbjct: 209 KVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHE 268
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
A + + + P T S+ L AC GLV GR++ + + +
Sbjct: 269 KNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMK 317
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 10/276 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + Q+ +++H + K+ D + A L+ Y +L A +F+ P
Sbjct: 396 ILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLLEDAAKVFEVCPAED 455
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ + S+I AY+ +A ++ + +KPD F ++ + AC+ S + +H
Sbjct: 456 LVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHV 515
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ GL D ++LV Y+K ID+A +F+ +S +V ++MI G A G K
Sbjct: 516 HVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQHGHGRK 575
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-----FCLKSSFDSYDYVS 243
+LQLF ML+ G P+ TLV ++S L++ + G F + + + Y
Sbjct: 576 ALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKLFGITPTQEHY---- 631
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ +V + R ++ A + + F W AL+
Sbjct: 632 ACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALL 667
>gi|297829702|ref|XP_002882733.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328573|gb|EFH58992.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 620
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 154/480 (32%), Positives = 257/480 (53%), Gaps = 2/480 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WN +R A F ++ SL++++LR+ PD F++ I ++C+ S + +H I
Sbjct: 18 WNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVI 77
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLC-NSMISGFAHCGFWDKS 189
G + +AL++ Y K L+++A KVF+ L +C N++ISG+ +
Sbjct: 78 RGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSDA 137
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+F M G + D T++GL+ P L +G+ +HG C+K S V + ++M
Sbjct: 138 AFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHGECVKGGTYSEVAVLNSFITM 197
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C + S +F+ + L+TW+A+I+GYSQ G L F ++ G DP +
Sbjct: 198 YMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELFEQMKSSGVCPDPFTL 257
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
SVL++ A G + V +GF +V +S+AL+ MY++CG L VF+ M
Sbjct: 258 VSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALISMYARCGNLAKARAVFDIMPV 317
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++++++ ++I G+HG F D+I++G+ PD + F +L AC H GL + G E+
Sbjct: 318 KSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 377
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M EY ++ EHY +V LLG AG L+EA FI S+P D AV GALL C I+
Sbjct: 378 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIDSMPVEPDGAVWGALLGACKIHK 437
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N D+AE+ ++ E +P Y V++SN Y++ + + ++R + + RK+ G S+V
Sbjct: 438 NVDMAELAFAKVIEFEPMNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 497
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 181/398 (45%), Gaps = 15/398 (3%)
Query: 14 KSHQSLS---RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVF 70
KS SLS ++LH V + +PF T L+ +Y ++ AR +F++ P S
Sbjct: 58 KSCASLSLPVSGQQLHCHVIRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQL 117
Query: 71 --LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I Y + +DA +F+ + T + D+ T + C+ L R +HG
Sbjct: 118 GVCYNALISGYTANSKVSDAAFMFRRMKETGVSVDSVTILGLVPLCTVPEYLWLGRSLHG 177
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G + ++ +T Y K ++ ++FD + L+ N++ISG++ G
Sbjct: 178 ECVKGGTYSEVAVLNSFITMYMKCGSVESGRRLFDEMPVKGLITWNAVISGYSQNGLAYD 237
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L+LF+ M G PD +TLV ++S +GQ + + F ++S+ L+S
Sbjct: 238 VLELFEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGQEVGELVEANGFAPNVFLSNALIS 297
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYARC + A VF+ + LV+W+A+I Y G L F + +G + D +
Sbjct: 298 MYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGETGLTLFDDMIKRGIRPDGAV 357
Query: 309 IASVLAAAAKSANVWPG-----AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
VL+A + S G A+ Y ++ G E S LVD+ + G L ++
Sbjct: 358 FVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEH----YSCLVDLLGRAGRLDEAMEF 413
Query: 364 FETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
++M E + + +++ +H A F +IE
Sbjct: 414 IDSMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIE 451
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 67/147 (45%), Gaps = 2/147 (1%)
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W+ + + Q + +++ +R + G D +L + A + G +H +V
Sbjct: 17 SWNVRLRELAYQSLFTESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV 76
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET--MSERNIITYNSVILGLGLHGFTYQ 390
I+ G E V +AL+ MY KCG + +VFE S + + YN++I G +
Sbjct: 77 IRGGCEAEPFVLTALISMYCKCGLVEDARKVFEENPHSSQLGVCYNALISGYTANSKVSD 136
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCAC 417
A FR + E G++ D T L+ C
Sbjct: 137 AAFMFRRMKETGVSVDSVTILGLVPLC 163
>gi|359483750|ref|XP_002269533.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20770-like [Vitis vinifera]
Length = 847
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 159/527 (30%), Positives = 260/527 (49%), Gaps = 35/527 (6%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L K D L+ +YA N + SA ++F P+ SV WN +I Y
Sbjct: 272 QQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVMIAGYGQK 331
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ + A + + +PD TY + AC ++ D+ R
Sbjct: 332 SQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGR------------------ 373
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++FDG+S P L N+++SG++ ++++LF M
Sbjct: 374 -----------------QMFDGMSSPSLSSWNTILSGYSQNENHKEAVKLFREMQFRSVH 416
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD TL ++S L LL G+ +H K+ F + Y++S L+ MY++C + A +
Sbjct: 417 PDRTTLAIILSSLAGMMLLEGGRQVHAVSQKAVFRTDIYLASGLIGMYSKCGKVEMAKRI 476
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D+V W++++ G S +A +F+K+ +G A+VL+ AK +++
Sbjct: 477 FDRIAELDIVCWNSMMAGLSLNSLDKEAFTFFKKMREKGMFPSQFSYATVLSCCAKLSSL 536
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + + G+ V SAL+DMYSKCG + VF+ M +N +T+N +I G
Sbjct: 537 SQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKNTVTWNEMIHGY 596
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+G +A + D+I G PD TF A+L AC H GLV+ G +IF M +E+G++
Sbjct: 597 AQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHSGLVDTGIKIFNSMQQEHGVEPL 656
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY ++ LG AG L EA I +P DP + LLS C +Y + LA A +LF
Sbjct: 657 VDHYTCIIDSLGRAGRLHEAEVLIDKMPCKYDPIIWEVLLSSCRVYADVSLARRAAEELF 716
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP+ A V+L+N Y+ GRWDD +R+ + N + K+ G SW+
Sbjct: 717 HLDPQNSAPYVLLANIYSSLGRWDDAKAVRELMSYNQVVKDPGYSWI 763
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 119/525 (22%), Positives = 229/525 (43%), Gaps = 111/525 (21%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVF------------ 70
K +HA + ++ L D F + +L+ YA N + ++R LFD+ P+R ++
Sbjct: 25 KLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCKA 84
Query: 71 -------------------LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACIT 111
WN++I A A ++ + R P +FT A +
Sbjct: 85 SELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASVL 144
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
AC D+ R HG +I GL + +AL+ Y+K I +AI+ F V +P+ V
Sbjct: 145 SACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNEV 204
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS----------GLWEPS-L 220
+M+ G A +++ +LF MLR D +L ++ GL + + +
Sbjct: 205 SFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSNDV 264
Query: 221 LSV---GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
LS GQ +H +K F+S ++++ L+ MYA+ M+SA +F ++ +V+W+ +
Sbjct: 265 LSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPEVSVVSWNVM 324
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG------------ 325
I GY Q+ KA+ Y +++ G + D + ++L A KS ++ G
Sbjct: 325 IAGYGQKSQSSKAIEYLQRMQYHGFEPDEITYVNMLVACIKSGDIEAGRQMFDGMSSPSL 384
Query: 326 ----AVIHGY---------------------------------------VIQHGFELSVM 342
++ GY +++ G ++ +
Sbjct: 385 SSWNTILSGYSQNENHKEAVKLFREMQFRSVHPDRTTLAIILSSLAGMMLLEGGRQVHAV 444
Query: 343 VSSAL--VDMYSKCGYLG---------LGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
A+ D+Y G +G + ++F+ ++E +I+ +NS++ GL L+ +A
Sbjct: 445 SQKAVFRTDIYLASGLIGMYSKCGKVEMAKRIFDRIAELDIVCWNSMMAGLSLNSLDKEA 504
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
F FF+ + EKG+ P + +++ +L C ++ GR++ +++ E
Sbjct: 505 FTFFKKMREKGMFPSQFSYATVLSCCAKLSSLSQGRQVHSQIARE 549
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 134/292 (45%), Gaps = 44/292 (15%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA------- 276
G+ IH L+S ++S+ L+ YA+CN ++++ +F+ + D+ TW+A
Sbjct: 24 GKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMPKRDIYTWNAILGAYCK 83
Query: 277 ------------------------LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
LI+ ++ G KAL + +++ +G +ASV
Sbjct: 84 ASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYRMSREGFVPTHFTLASV 143
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+A +V G HG I+ G + ++ V +AL+ MY+KC +G IQ F + E N
Sbjct: 144 LSACGALVDVECGRRCHGISIKIGLDNNIYVGNALLGMYAKCRCIGDAIQAFGDVPEPNE 203
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL----VNDGRE 428
+++ +++ GL +AF FR ++ ++ D + S++L C GG ++D +
Sbjct: 204 VSFTAMMGGLADSDQVNEAFRLFRLMLRNRIHVDSVSLSSVLGVCSRGGCGEFGLHDSND 263
Query: 429 IFTR---------MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ + +T ++G ++ ++ + GN++ A ++P+
Sbjct: 264 VLSSDVHGQQVHCLTIKHGFESDLHLNNSLLDMYAKNGNMDSAEMIFVNMPE 315
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 58/109 (53%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL SLS+ +++H+ +A+ + D F + L+ +Y+ + +AR +FD ++
Sbjct: 526 VLSCCAKLSSLSQGRQVHSQIAREGYMNDAFVGSALIDMYSKCGDVDAARWVFDMMLGKN 585
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
WN +I YA ++A L+++++ + KPD T+ + ACS +
Sbjct: 586 TVTWNEMIHGYAQNGCGDEAVLLYEDMIGSGEKPDGITFVAVLTACSHS 634
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 62/147 (42%), Gaps = 33/147 (22%)
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET-- 366
+AS+L G +IH ++++ +S+ L++ Y+KC + ++F+
Sbjct: 8 LASLLQTCIDKKAHLAGKLIHAHMLRSRLSDDTFLSNRLIEFYAKCNAIDASRRLFDQMP 67
Query: 367 -----------------------------MSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
M ERNI+++N++I L +GF +A +
Sbjct: 68 KRDIYTWNAILGAYCKASELEDAHVLFAEMPERNIVSWNTLISALTRNGFEQKALGVYYR 127
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVN 424
+ +G P T +++L AC G LV+
Sbjct: 128 MSREGFVPTHFTLASVLSAC--GALVD 152
>gi|356519383|ref|XP_003528352.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 614
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 166/579 (28%), Positives = 298/579 (51%), Gaps = 40/579 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS---ARILFDKTPQ 66
+ L KS +S+S+ K++ A + L +D KL+ +++++ L A +F+
Sbjct: 12 ISLLKSCKSMSQLKQIQAHIFCVGLQQDRDTLNKLM-AFSMDSSLGDFNYANRIFNYIHD 70
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
S+F++N +I+A+ + F A SLF+ L + PDN+TY + + ++ V
Sbjct: 71 PSLFIYNLMIKAFVKSGSFRSAISLFQQLREHGVWPDNYTYPYVLKGIGCIGEVREGEKV 130
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + +GL D ++ + Y++L L++ +VF+ + D D V N MISG+ C +
Sbjct: 131 HAFVVKTGLEFDPYVCNSFMDMYAELGLVEGFTQVFEEMPDRDAVSWNIMISGYVRCKRF 190
Query: 187 DKSLQLFDWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++++ ++ M + P+E T+V +S L +G+ IH + + S D + +
Sbjct: 191 EEAVDVYRRMWTESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IASELDLTTIMGNA 249
Query: 246 LVSMYARC------------------NC-------------MNSAYHVFNSLFHPDLVTW 274
L+ MY +C NC ++ A ++F D+V W
Sbjct: 250 LLDMYCKCGHVSVAREIFDAMTVKNVNCWTSMVTGYVICGQLDQARNLFERSPSRDIVLW 309
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+A+I GY Q + + + F ++ ++G K D ++ ++L A+S + G IH Y+ +
Sbjct: 310 TAMINGYVQFNRFEETIALFGEMQIRGVKPDKFIVVTLLTGCAQSGALEQGKWIHNYIDE 369
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ ++ +V +AL++MY+KCG + ++F + E++ ++ S+I GL ++G +A E
Sbjct: 370 NRIKVDAVVGTALIEMYAKCGCIEKSFEIFNGLKEKDTTSWTSIICGLAMNGKPSEALEL 429
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F+ + GL PD+ TF A+L AC H GLV +GR++F M+ Y I+ EHY + LLG
Sbjct: 430 FKAMQTCGLKPDDITFVAVLSACSHAGLVEEGRKLFHSMSSMYHIEPNLEHYGCFIDLLG 489
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVS---GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
AG L+EA + LP + + GALLS C YGN D+ E +A L + +
Sbjct: 490 RAGLLQEAEELVKKLPAQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSL 549
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L++ YA RW+DV K+R+ + D G++K G S +
Sbjct: 550 HTLLASIYASADRWEDVRKVRNKMKDLGIKKVPGYSAIE 588
>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 276/528 (52%), Gaps = 2/528 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + K L+ + L+ +Y+ L A ILF K +SV WNS+I AY+
Sbjct: 335 IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 85 FNDAKSLFKNLLRTQ--LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ L + + + ++ + T + AC E S+L LR +HG ++ + +
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A + AY+K + A VF G++ + N++I G A G K+L + M RLG
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD++++V L+ LL G+ IHGF L++ + +V+ L+S+Y C+
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTY 574
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++ + V W+A+++GYSQ +AL FR++ G + D + IAS+L A ++ + +
Sbjct: 575 FETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSAL 634
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + +++ V+ +L+DMY+K G+LG ++F ++ + + ++N +I G
Sbjct: 635 GLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGF 694
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG +A E F D+ PD TF +L ACCH GLV++G +M Y ++ +
Sbjct: 695 GVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPE 754
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY ++ +LG AG L EA +FI +P+ D + +LLS Y + ++ E A +L
Sbjct: 755 LEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLL 814
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ K ++LSN YA G+WD V +R + D L+K+ G SW+
Sbjct: 815 ALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIE 862
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 236/428 (55%), Gaps = 6/428 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFY-ATKLVRLYALNNVLPSARILFDKTPQ 66
++L+ ++++ ++L ++ +S F T+L+ +Y++ +R++FD+
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRF 125
+++F WN+++ Y +++A F L+ T+ +PDNFT+ C+ +AC+ D+ +
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG A+ GL D +A++ Y K +DEA+++FD + + +L+ NS+I GF+ GF
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291
Query: 186 WDKSLQLFDWMLRLGK--TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
W ++ + F +L G PD T+V L+ + VG IHG +K V
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK- 302
+ L+ MY++C C++ A +F + + +V+W+++I YS++G + RK+ M+ +
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411
Query: 303 -KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ + V I ++L A + + + +HGY ++H F+ ++++A + Y+KCG L
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE 471
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
VF M+ +++ ++N+VI G +G +A +F+ ++ G+ PD+ + +LL AC G
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLG 531
Query: 422 LVNDGREI 429
L+ G+EI
Sbjct: 532 LLQYGKEI 539
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L KE+H K SL+ D F A L+ +YA + L ++ +F++ + V WN +I
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ + + N A LF+++ R+ +PD FT+ + +AC H G + GL
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQAC-----------CHAGLVSEGL 739
>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
Length = 890
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 287/587 (48%), Gaps = 60/587 (10%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAYAL 81
H L+ + F LV +Y+ L A ++FD+ QR V WNSI+ A+
Sbjct: 177 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 236
Query: 82 AHRFNDAKSLFKNL-LRTQLKPDN-----FTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ A LF + L KP N + I AC +P + VHG AI +G
Sbjct: 237 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 296
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD-------- 187
D +AL+ AY+K L++ A+KVF+ + D+V N+M++G++ G ++
Sbjct: 297 FPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKN 356
Query: 188 ---------------------------KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
++L LF M+ G P+ T++ ++S
Sbjct: 357 MRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGA 416
Query: 221 LSVGQGIHGFCLKSSFDSYD----------YVSSVLVSMYARCNCMNSAYHVFNS--LFH 268
S G IH + LK+ + D V + L+ MY++C +A +F+ L
Sbjct: 417 FSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEE 476
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQ--GKKADPVLIASVLAAAAKSANVWPGA 326
++VTW+ +I G++Q GD AL F ++ + G + I+ +L A A A + G
Sbjct: 477 RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGK 536
Query: 327 VIHGYVIQHG-FELSV-MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
IH YV++H +E S V++ L+DMYSKCG + VF++MS+++ I++ S++ G G+
Sbjct: 537 QIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM 596
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + F + + G PD+ TF +L AC H G+V+ G F M+ +YG+ + E
Sbjct: 597 HGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAE 656
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY + LL +G L++A+ + +P V ALLS C ++ N +LAE ++L E
Sbjct: 657 HYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 716
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
+ ++SN YA GRW DV ++R + +G++K G SWV G
Sbjct: 717 NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQG 763
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 208/467 (44%), Gaps = 69/467 (14%)
Query: 29 VAKASLLRDPFYA-----TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
V+ +L +PF + T +V Y A ++ ++ WN +IR +
Sbjct: 75 VSLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQG 134
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRDSI 140
R + A ++ +LR +PD+FT + +AC E LP R HG +G +
Sbjct: 135 RLDSAINVSCRMLRAGTRPDHFTLPHVLKACGE---LPSYRCGSAFHGLICCNGFESNVF 191
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSD---PDLVLCNSMISGFAHCGFWDKSLQLFDWM- 196
+ALV YS+ ++EA +FD ++ D++ NS++S +L LF M
Sbjct: 192 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 251
Query: 197 LRLGKTP-----DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
L + + P D ++V ++ + + +HG +++ +V + L+ YA
Sbjct: 252 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYA 311
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG----------------------- 288
+C M +A VFN + D+V+W+A++ GYSQ G++
Sbjct: 312 KCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTA 371
Query: 289 ------------KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH- 335
+AL FR++ G + V I SVL+A A G IH Y +++
Sbjct: 372 VIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNC 431
Query: 336 ---------GFELSVMVSSALVDMYSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGL 384
G + +MV +AL+DMYSKC +F+ + ERN++T+ +I G
Sbjct: 432 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 491
Query: 385 HGFTYQAFEFFRDIIEK--GLNPDESTFSALLCACCHGGLVNDGREI 429
+G + A + F ++I + G+ P+ T S +L AC H + G++I
Sbjct: 492 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 538
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ +V +Y D A+ V + V+ V N +I G D ++ + MLR G
Sbjct: 93 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 152
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +TL ++ E G HG + F+S ++ + LV+MY+RC + A +
Sbjct: 153 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 212
Query: 263 FNSLFH---PDLVTWSALITGYSQQGDYGKALYYFRKLNM------QGKKADPVLIASVL 313
F+ + D+++W+++++ + + + AL F K+ + +++D + I ++L
Sbjct: 213 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 272
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A V +HG I++G V V +AL+D Y+KCG + ++VF M ++++
Sbjct: 273 PACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 332
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++N+++ G G AFE F+++ ++ + D T++A++ G ++ +F +M
Sbjct: 333 SWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 392
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 94/465 (20%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +++ +TKE+H + D F L+ YA ++ +A +F+ +
Sbjct: 271 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 330
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI-----TRACSENS----- 118
V WN+++ Y+ + F A LFKN+ + + D T+ + R CS +
Sbjct: 331 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 390
Query: 119 ------DLPGL--------------RFVHGGAI---------------VSGLGRDSITSS 143
LP F G I G D + +
Sbjct: 391 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 450
Query: 144 ALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR--L 199
AL+ YSK A +FD + + ++V MI G A G + +L+LF M+
Sbjct: 451 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 510
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYDY-VSSVLVSMYARCNCMN 257
G P+ YT+ ++ + + +G+ IH + L+ ++S Y V++ L+ MY++C ++
Sbjct: 511 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 570
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A HVF+S+ ++W++++TGY G +AL F K+ G D + VL A
Sbjct: 571 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC- 629
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT--- 374
S CG + G+ F++MS +T
Sbjct: 630 ----------------------------------SHCGMVDQGLSYFDSMSADYGLTPRA 655
Query: 375 --YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
Y I L G +A+ +D+ + P + ALL AC
Sbjct: 656 EHYACAIDLLARSGRLDKAWRTVKDM---PMEPTAVVWVALLSAC 697
>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 972
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/520 (30%), Positives = 263/520 (50%), Gaps = 38/520 (7%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W ++I +A S+F+ ++ +KP++ T A AC+ S L R +H
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 128 GGAI-VSGLGRDSITSSALVTAYSKLSLID------------------------------ 156
G I V L D + ++LV Y+K ++
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 157 -EAIKV-----FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
EAI++ F G+ +PD++ N +++GF G +L+ F M +G P+ T+ G
Sbjct: 446 EEAIELLSEMKFQGI-EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++ + L +G+ IHG+ L++ + V S L+SMY+ C+ + A VF+ L D
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
+V W+++I+ +Q G AL R++N+ + + V + S L A +K A + G IH
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ 624
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
++I+ G + + ++L+DMY +CG + ++F+ M +R+++++N +I G+HGF
Sbjct: 625 FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMD 684
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A F+ GL P+ TF+ LL AC H GL+ +G + F M EY + E Y MV
Sbjct: 685 AVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMV 744
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
LL AG E FI +P + AV G+LL C I+ N DLAE A LFE +P+
Sbjct: 745 DLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSG 804
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+++N Y+ GRW+D K+R + + G+ K G SW+
Sbjct: 805 NYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIE 844
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 188/414 (45%), Gaps = 76/414 (18%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR F++ + VF+WN ++ Y +K FK L+ CI
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYT-------SKGEFKKALK-----------CI------ 279
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF---DGVSD--PDLV 171
SD+ +SG+ D +T +A+++ Y++ +EA K F G+ D P++V
Sbjct: 280 -SDMK----------LSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
++I+G G+ ++L +F M+ G P+ T+ +S SLL G+ IHG+C
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388
Query: 232 LK-SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA-------------- 276
+K DS V + LV YA+C + A F + DLV+W+A
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEA 448
Query: 277 ---------------------LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
L+TG++Q GD AL +F++++ G + I+ LAA
Sbjct: 449 IELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAA 508
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ N+ G IHGYV+++ ELS V SAL+ MYS C L + VF +S R+++ +
Sbjct: 509 CGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVW 568
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
NS+I G + A + R++ + + T + L AC + G+EI
Sbjct: 569 NSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEI 622
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 230/512 (44%), Gaps = 38/512 (7%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA + + F ++L+ +Y + AR +FDK +R+VF W +I+ Y
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ + LF ++ ++PD+F + + +ACSE + + V+ + G +S
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+++ + K +D A + F+ + D+ + N M+SG+ G + K+L+ M G P
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D+ T +ISG + GQ ++ S + M +
Sbjct: 290 DQVTWNAIISGYAQS-----GQ-------------FEEASKYFLEMGGLKD--------- 322
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
F P++V+W+ALI G Q G +AL FRK+ ++G K + + IAS ++A + +
Sbjct: 323 ---FKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLR 379
Query: 324 PGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IHGY I+ + ++V ++LVD Y+KC + + + F + + +++++N+++ G
Sbjct: 380 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGY 439
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
L G +A E ++ +G+ PD T++ L+ G E F RM G+
Sbjct: 440 ALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPN 498
Query: 443 TEHYIYMVKLLGLAGNL---EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
T + G NL +E + ++ + V AL+S +Y D E+
Sbjct: 499 TTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALIS---MYSGCDSLEVACS 555
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
E R + + A+ GR + + L
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDL 587
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 164/352 (46%), Gaps = 37/352 (10%)
Query: 83 HR---FNDAKSLFKNLLRTQLKPDNFT--YACITRACSENSDLPGLRFVHGGAIVSGLGR 137
HR N+A L ++ T PD YA I + C + +L VH +V+G+
Sbjct: 65 HRNGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDV 122
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S L+ Y + +++A ++FD +S+ ++ +++ + G ++++++LF M+
Sbjct: 123 CEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMV 182
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G PD + + E VG+ ++ + L F+ V ++ M+ +C M+
Sbjct: 183 NEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMD 242
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A F + D+ W+ +++GY+ +G++ KAL + + G K D V
Sbjct: 243 IARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV---------- 292
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
W A+I GY FE + S ++M G++ F+ N++++ +
Sbjct: 293 ----TW-NAIISGYAQSGQFEEA---SKYFLEMG--------GLKDFKP----NVVSWTA 332
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+I G +G+ ++A FR ++ +G+ P+ T ++ + AC + L+ GREI
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 106/213 (49%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +G +H + + D +++ S L+ +Y + C+ A +F+ + ++ +W+A++
Sbjct: 105 LRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEM 164
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y GDY + + F + +G + D + V A ++ N G ++ Y++ GFE +
Sbjct: 165 YCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGN 224
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V +++DM+ KCG + + + FE + +++ +N ++ G G +A + D+
Sbjct: 225 SCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKL 284
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G+ PD+ T++A++ G + + F M
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEM 317
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 8/308 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L KE+H V + + + L+ +Y+ + L A +F + R V +WNSII
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSII 572
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A A + R +A L + + + ++ + T ACS+ + L + +H I GL
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 632
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ ++L+ Y + I ++ ++FD + DLV N MIS + GF ++ LF
Sbjct: 633 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQF 692
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYARCN 254
+G P+ T L+S L+ G +K+ + V + +V + +R
Sbjct: 693 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMDPAVEQYACMVDLLSRAG 751
Query: 255 CMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALY---YFRKLNMQGKKADPVLIA 310
N + F P+ W +L+ + A Y Y +L Q + VL+A
Sbjct: 752 QFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ-SSGNYVLMA 810
Query: 311 SVLAAAAK 318
++ +AA +
Sbjct: 811 NIYSAAGR 818
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 13/213 (6%)
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS------Q 283
F L S+F +S L ++ R NC A S L ITG+S +
Sbjct: 8 FALNSNFAIQPKGTSPLQTLPTR-NCCIVASTNTKSQNLRKLTNARQRITGFSGGGSVHR 66
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G A +++ + AS+L K N+ G +H ++ +G ++ +
Sbjct: 67 NGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFL 126
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI---LGLGLHGFTYQAFEFFRDIIE 400
S L+++Y + G + ++F+ MSERN+ ++ +++ GLG + T + F ++
Sbjct: 127 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL---MVN 183
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+G+ PD F + AC G++++ M
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216
>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
Length = 897
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 175/587 (29%), Positives = 287/587 (48%), Gaps = 60/587 (10%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAYAL 81
H L+ + F LV +Y+ L A ++FD+ QR V WNSI+ A+
Sbjct: 184 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 243
Query: 82 AHRFNDAKSLFKNL-LRTQLKPDN-----FTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ A LF + L KP N + I AC +P + VHG AI +G
Sbjct: 244 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 303
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD-------- 187
D +AL+ AY+K L++ A+KVF+ + D+V N+M++G++ G ++
Sbjct: 304 FPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKN 363
Query: 188 ---------------------------KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
++L LF M+ G P+ T++ ++S
Sbjct: 364 MRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGA 423
Query: 221 LSVGQGIHGFCLKSSFDSYD----------YVSSVLVSMYARCNCMNSAYHVFNS--LFH 268
S G IH + LK+ + D V + L+ MY++C +A +F+ L
Sbjct: 424 FSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEE 483
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQ--GKKADPVLIASVLAAAAKSANVWPGA 326
++VTW+ +I G++Q GD AL F ++ + G + I+ +L A A A + G
Sbjct: 484 RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGK 543
Query: 327 VIHGYVIQHG-FELSV-MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
IH YV++H +E S V++ L+DMYSKCG + VF++MS+++ I++ S++ G G+
Sbjct: 544 QIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM 603
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + F + + G PD+ TF +L AC H G+V+ G F M+ +YG+ + E
Sbjct: 604 HGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAE 663
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY + LL +G L++A+ + +P V ALLS C ++ N +LAE ++L E
Sbjct: 664 HYACAIDLLARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 723
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
+ ++SN YA GRW DV ++R + +G++K G SWV G
Sbjct: 724 NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQG 770
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/467 (25%), Positives = 208/467 (44%), Gaps = 69/467 (14%)
Query: 29 VAKASLLRDPFYA-----TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
V+ +L +PF + T +V Y A ++ ++ WN +IR +
Sbjct: 82 VSLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQG 141
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRDSI 140
R + A ++ +LR +PD+FT + +AC E LP R HG +G +
Sbjct: 142 RLDSAINVSCRMLRAGTRPDHFTLPHVLKACGE---LPSYRCGSAFHGLICCNGFESNVF 198
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSD---PDLVLCNSMISGFAHCGFWDKSLQLFDWM- 196
+ALV YS+ ++EA +FD ++ D++ NS++S +L LF M
Sbjct: 199 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 258
Query: 197 LRLGKTP-----DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
L + + P D ++V ++ + + +HG +++ +V + L+ YA
Sbjct: 259 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYA 318
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG----------------------- 288
+C M +A VFN + D+V+W+A++ GYSQ G++
Sbjct: 319 KCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTA 378
Query: 289 ------------KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH- 335
+AL FR++ G + V I SVL+A A G IH Y +++
Sbjct: 379 VIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNC 438
Query: 336 ---------GFELSVMVSSALVDMYSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGL 384
G + +MV +AL+DMYSKC +F+ + ERN++T+ +I G
Sbjct: 439 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 498
Query: 385 HGFTYQAFEFFRDIIEK--GLNPDESTFSALLCACCHGGLVNDGREI 429
+G + A + F ++I + G+ P+ T S +L AC H + G++I
Sbjct: 499 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 545
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ +V +Y D A+ V + V+ V N +I G D ++ + MLR G
Sbjct: 100 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 159
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +TL ++ E G HG + F+S ++ + LV+MY+RC + A +
Sbjct: 160 PDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 219
Query: 263 FNSLFH---PDLVTWSALITGYSQQGDYGKALYYFRKLNM------QGKKADPVLIASVL 313
F+ + D+++W+++++ + + + AL F K+ + +++D + I ++L
Sbjct: 220 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 279
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A V +HG I++G V V +AL+D Y+KCG + ++VF M ++++
Sbjct: 280 PACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 339
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++N+++ G G AFE F+++ ++ + D T++A++ G ++ +F +M
Sbjct: 340 SWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFRQM 399
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 94/465 (20%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +++ +TKE+H + D F L+ YA ++ +A +F+ +
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 337
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI-----TRACSENS----- 118
V WN+++ Y+ + F A LFKN+ + + D T+ + R CS +
Sbjct: 338 VVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNLFR 397
Query: 119 ------DLPGL--------------RFVHGGAI---------------VSGLGRDSITSS 143
LP F G I G D + +
Sbjct: 398 QMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 457
Query: 144 ALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR--L 199
AL+ YSK A +FD + + ++V MI G A G + +L+LF M+
Sbjct: 458 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 517
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYDY-VSSVLVSMYARCNCMN 257
G P+ YT+ ++ + + +G+ IH + L+ ++S Y V++ L+ MY++C ++
Sbjct: 518 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGDVD 577
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A HVF+S+ ++W++++TGY G +AL F K+ G D + VL A
Sbjct: 578 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC- 636
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT--- 374
S CG + G+ F++MS +T
Sbjct: 637 ----------------------------------SHCGMVDQGLSYFDSMSADYGLTPRA 662
Query: 375 --YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
Y I L G +A+ +D+ + P + ALL AC
Sbjct: 663 EHYACAIDLLARSGRLDKAWRTVKDM---PMEPTAVVWVALLSAC 704
>gi|225452956|ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
[Vitis vinifera]
gi|296082987|emb|CBI22288.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 273/527 (51%), Gaps = 2/527 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA + D F L+ +Y + AR +FD +R++ WN++I Y
Sbjct: 145 IHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A +F ++ ++PD T + CS +L R VH V LG D ++
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K +DEA +F + D+V +M++G+ G +L L M P+
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TL ++S L G+ +HG+ ++ +S V + L+ MYA+CN +N ++ VF+
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFS 384
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
W+A+I+G G KA+ F+++ M+ + + S+L A A ++
Sbjct: 385 KTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQ 444
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM--SERNIITYNSVILGL 382
+HGY+I+ GF + V++ L+D+YSKCG L +F + +++IIT++++I G
Sbjct: 445 ARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGY 504
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG A F +++ G+ P+E TF+++L AC H GLV++G +F M E+ + +
Sbjct: 505 GMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLR 564
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
T+HY ++ LLG AG LEEAY I ++ + AV GALL C I+ N +L E+ A LF
Sbjct: 565 TDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLF 624
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E +P V+L+N Y+ GRW D +R + + GLRK S +
Sbjct: 625 ELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLI 671
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/502 (27%), Positives = 259/502 (51%), Gaps = 8/502 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPF---YATKLVRLYALNNVLPSARILFDKTP 65
+L+ S +S+ TK++HA LL P+ + L YA+ P AR LFD+
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFDELR 83
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGL- 123
S+F WN++IR Y + DA LF +L + + PDN+TY + +AC + LP +
Sbjct: 84 NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYL-LPEMG 142
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H ++SG D+ ++L+ Y ++ A +VFD + + LV N+MI+G+
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++L +FDWM+ G PD T+V ++ L VG+ +H + V
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVW 262
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+ MYA+C M+ A +F + D+V+W+ ++ GY GD AL + + + K
Sbjct: 263 NSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVK 322
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ V +ASVL+A A ++ G +HG+ I+ E V+V +AL+DMY+KC + L +V
Sbjct: 323 PNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRV 382
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F S++ +N++I G +G + +A E F+ ++ + ++P+++T ++LL A +
Sbjct: 383 FSKTSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDL 442
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALL 482
R + + G ++ E ++ + G+LE A++ +PK ++ A++
Sbjct: 443 QQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAII 501
Query: 483 SCCHIYGNSDLAEIVAHQLFEN 504
+ ++G+ + A + Q+ ++
Sbjct: 502 AGYGMHGHGETAISLFDQMVQS 523
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 45/416 (10%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + L + +HALV +L D L+ +YA + A+++F + +R
Sbjct: 230 VLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +++ Y L A L + + +KP+ T A + AC+ L R +HG
Sbjct: 290 VVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHG 349
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI L + I +AL+ Y+K + ++ + +VF S N++ISG H G K
Sbjct: 350 WAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKTSKQRTAPWNAIISGCIHNGLSRK 409
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++LF ML P++ TL L+ + L + +HG+ ++S F S V+++L+
Sbjct: 410 AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILID 469
Query: 249 MYARCNCMNSAYHVFNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+Y++C + SA+++FN + D++TWSA+I GY G A+ F ++ G K +
Sbjct: 470 IYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNE 529
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ S+L A S G + G+ +F+
Sbjct: 530 ITFTSILHAC-----------------------------------SHAGLVDEGLGLFKF 554
Query: 367 MSERNIIT-----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
M E N ++ Y VI LG G +A+E R + P+ + + ALL +C
Sbjct: 555 MLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTM---AFRPNHAVWGALLGSC 607
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 4/315 (1%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS---SALVTAYSKLSLIDEAIKVFD 163
Y + + C+ +P + +H I GL + S+L AY+ A K+FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMFGCAPHARKLFD 80
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLS 222
+ +P L N+MI + + G +L LF ML G+ PD YT +I + L
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G IH + S FDS +V + L++MY C M A VF+ + LV+W+ +I GY
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G +AL F + +G + D + SVL + + G +H V +
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V ++L+DMY+KCG + +F M +R+++++ +++ G L+G A + + +
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 403 LNPDESTFSALLCAC 417
+ P+ T +++L AC
Sbjct: 321 VKPNFVTLASVLSAC 335
>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
Length = 839
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/537 (31%), Positives = 270/537 (50%), Gaps = 2/537 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
LS ++LHA K D T +V +YA + L AR F P +V N+++
Sbjct: 253 LSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVG 312
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGR 137
+A LF+ + R+ + D + + + AC+E L GL+ VH AI SG
Sbjct: 313 LVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQ-VHCLAIKSGFDV 371
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D +A++ Y K + EA VF + D V N++I+ ++ ++ + ML
Sbjct: 372 DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEML 431
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G PD++T ++ L G +HG +KS +VSS +V MY +C +
Sbjct: 432 RYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMIT 491
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A + + + +LV+W+++I+G+S +A +F ++ G K D A+VL A
Sbjct: 492 EAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCA 551
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G IHG +I+ +SS LVDMY+KCG + + +FE + + +++N+
Sbjct: 552 NLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNA 611
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G LHG ++A E F + + + P+ +TF A+L AC H GL++DG F MT Y
Sbjct: 612 MICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDGCRYFYLMTSRY 671
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
++ + EH+ MV +LG + +EA FI S+P D + LLS C I + ++AE
Sbjct: 672 KLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSICKIRQDVEVAETA 731
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
A + DP + ++LSN YAE G+W DV + R + L+KE G SW+ S
Sbjct: 732 ASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPGCSWIEVQSE 788
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 202/420 (48%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L+ ++HA+ K L D + LV +Y L A F +R+ W + I
Sbjct: 150 EDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGERNSVSWGAAI 209
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
++ LF + R L YA + R+C+ + L R +H AI +
Sbjct: 210 AGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLHAHAIKNKFS 269
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D + +A+V Y+K + +A + F + + + CN+M+ G G ++LQLF +M
Sbjct: 270 ADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFM 329
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R G D +L G+ S E G +H +KS FD V + ++ +Y +C +
Sbjct: 330 TRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKAL 389
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
AY VF + D V+W+A+I Q Y + Y ++ G + D SVL A
Sbjct: 390 VEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKAC 449
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A ++ G+V+HG I+ G L VSS +VDMY KCG + ++ + + + ++++N
Sbjct: 450 AGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQELVSWN 509
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I G L+ + +A +FF ++++ G+ PD T++ +L C + + G++I ++ ++
Sbjct: 510 SIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQ 569
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 197/443 (44%), Gaps = 31/443 (6%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H L +L+ + HA + + + F + L+++YA AR +FD P
Sbjct: 7 HLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMP 66
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFK-------------------------------N 94
R WN+++ AYA A A SLF
Sbjct: 67 HRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVE 126
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+ R + PD T A + +AC DL +H A+ +GL D SALV Y K
Sbjct: 127 MARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRS 186
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+++A++ F G+ + + V + I+G + + L+LF M RLG + +
Sbjct: 187 LEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRS 246
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ LS + +H +K+ F + V + +V +YA+ + + A F SL + +
Sbjct: 247 CAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQAC 306
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+A++ G + G +AL F+ + G D V ++ V +A A+ G +H I+
Sbjct: 307 NAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIK 366
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF++ V V +A++D+Y KC L VF+ M +R+ +++N++I L + +
Sbjct: 367 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAY 426
Query: 395 FRDIIEKGLNPDESTFSALLCAC 417
+++ G+ PD+ T+ ++L AC
Sbjct: 427 LNEMLRYGMEPDDFTYGSVLKAC 449
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 111/242 (45%), Gaps = 31/242 (12%)
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC---------------------NCMN 257
S L+ GQ H L S F +VS+ L+ MYARC N M
Sbjct: 18 SALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTML 77
Query: 258 SAY----------HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+AY +F ++ PD+V+W+AL++GY Q+G + ++ ++ +G D
Sbjct: 78 TAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSVGLSVEMARRGVAPDRT 137
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A +L A ++ G IH ++ G E+ V SALVDMY KC L ++ F M
Sbjct: 138 TLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGM 197
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ERN +++ + I G + + E F + GL + ++++ +C ++ R
Sbjct: 198 GERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTAR 257
Query: 428 EI 429
++
Sbjct: 258 QL 259
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ QSL +H K+ L D F ++ +V +Y ++ A+ L D+ +
Sbjct: 445 VLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVVDMYCKCGMITEAQKLHDRIGGQE 504
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WNSII ++L + +A+ F +L +KPD+FTYA + C+ + + + +HG
Sbjct: 505 LVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHFTYATVLDTCANLATIELGKQIHG 564
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D SS LV Y+K + +++ +F+ D V N+MI G+A G +
Sbjct: 565 QIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKAQKLDFVSWNAMICGYALHGQGFE 624
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+L++F+ M + P+ T V ++ LL G
Sbjct: 625 ALEMFERMQQANVVPNHATFVAVLRACSHVGLLDDG 660
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A A + + G H ++ GF + VS+ L+ MY++CG VF+ M R+
Sbjct: 11 LCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGVFDVMPHRDT 70
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++N+++ G T A F + +PD +++ALL C G+ D +
Sbjct: 71 VSWNTMLTAYAHAGDTGAAASLFGAMP----DPDVVSWNALLSGYCQRGMFRDSVGLSVE 126
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
M +T + LL G LE+
Sbjct: 127 MARRGVAPDRTT----LAVLLKACGGLED 151
>gi|147819295|emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
Length = 676
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 273/527 (51%), Gaps = 2/527 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA + D F L+ +Y + AR +FD +R++ WN++I Y
Sbjct: 145 IHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKNGC 204
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A +F ++ ++PD T + CS +L R VH V LG D ++
Sbjct: 205 VKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNS 264
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K +DEA +F + D+V +M++G+ G +L L M P+
Sbjct: 265 LLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVKPN 324
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
TL ++S L G+ +HG+ ++ +S V + L+ MYA+CN +N ++ VF+
Sbjct: 325 FVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFS 384
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
W+A+I+G G KA+ F+++ M+ + + S+L A A ++
Sbjct: 385 KXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQ 444
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM--SERNIITYNSVILGL 382
+HGY+I+ GF + V++ L+D+YSKCG L +F + +++IIT++++I G
Sbjct: 445 ARNMHGYLIRSGFLSRIEVATILIDIYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGY 504
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG A F +++ G+ P+E TF+++L AC H GLV++G +F M E+ + +
Sbjct: 505 GMHGHGETAISLFDQMVQSGVKPNEITFTSILHACSHAGLVDEGLGLFKFMLEDNQMSLR 564
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
T+HY ++ LLG AG LEEAY I ++ + AV GALL C I+ N +L E+ A LF
Sbjct: 565 TDHYTCVIDLLGRAGRLEEAYELIRTMAFRPNHAVWGALLGSCVIHENVELGEVAAKWLF 624
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E +P V+L+N Y+ GRW D +R + + GLRK S +
Sbjct: 625 ELEPGNTGNYVLLANIYSAVGRWRDAEHVRLMMNNIGLRKTPAHSLI 671
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/468 (29%), Positives = 242/468 (51%), Gaps = 7/468 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPF---YATKLVRLYALNNVLPSARILFDKTP 65
+L+ S +S+ TK++HA LL P+ + L YA+ P AR LFD+
Sbjct: 24 LLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFDELR 83
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGL- 123
S+F WN++IR Y + DA LF +L + + PDN+TY + +AC + LP +
Sbjct: 84 NPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYL-LPEMG 142
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H ++SG D+ ++L+ Y ++ A +VFD + + LV N+MI+G+
Sbjct: 143 ALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYFKN 202
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++L +FDWM+ G PD T+V ++ L VG+ +H + V
Sbjct: 203 GCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDISVW 262
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+ MYA+C M+ A +F + D+V+W+ ++ GY GD AL + + + K
Sbjct: 263 NSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFESVK 322
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ V +ASVL+A A ++ G +HG+ I+ E V+V +AL+DMY+KC + L +V
Sbjct: 323 PNFVTLASVLSACASLYSLKHGRCLHGWAIRQKLESEVIVETALIDMYAKCNNVNLSFRV 382
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F S++ +N++I G +G + +A E F+ ++ + ++P+++T ++LL A +
Sbjct: 383 FSKXSKQRTAPWNAIISGCIHNGLSRKAIELFKQMLMEAVDPNDATLNSLLPAYAFLTDL 442
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
R + + G ++ E ++ + G+LE A++ +PK
Sbjct: 443 QQARNMHGYLIRS-GFLSRIEVATILIDIYSKCGSLESAHNIFNGIPK 489
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 188/416 (45%), Gaps = 45/416 (10%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + L + +HALV +L D L+ +YA + A+++F + +R
Sbjct: 230 VLPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMDEAQMIFYEMDKRD 289
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W +++ Y L A L + + +KP+ T A + AC+ L R +HG
Sbjct: 290 VVSWTTMMNGYILNGDARSALLLCQMMQFESVKPNFVTLASVLSACASLYSLKHGRCLHG 349
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI L + I +AL+ Y+K + ++ + +VF S N++ISG H G K
Sbjct: 350 WAIRQKLESEVIVETALIDMYAKCNNVNLSFRVFSKXSKQRTAPWNAIISGCIHNGLSRK 409
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++LF ML P++ TL L+ + L + +HG+ ++S F S V+++L+
Sbjct: 410 AIELFKQMLMEAVDPNDATLNSLLPAYAFLTDLQQARNMHGYLIRSGFLSRIEVATILID 469
Query: 249 MYARCNCMNSAYHVFNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+Y++C + SA+++FN + D++TWSA+I GY G A+ F ++ G K +
Sbjct: 470 IYSKCGSLESAHNIFNGIPKKDKDIITWSAIIAGYGMHGHGETAISLFDQMVQSGVKPNE 529
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ S+L A S G + G+ +F+
Sbjct: 530 ITFTSILHAC-----------------------------------SHAGLVDEGLGLFKF 554
Query: 367 MSERNIIT-----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
M E N ++ Y VI LG G +A+E R + P+ + + ALL +C
Sbjct: 555 MLEDNQMSLRTDHYTCVIDLLGRAGRLEEAYELIRTM---AFRPNHAVWGALLGSC 607
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 151/315 (47%), Gaps = 4/315 (1%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS---SALVTAYSKLSLIDEAIKVFD 163
Y + + C+ +P + +H I GL + S+L AY+ A K+FD
Sbjct: 21 YQSLLQRCTSRKSIPNTKQIHAHTITLGLLSSPYSHHLLSSLAAAYAMCGCAPHARKLFD 80
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLS 222
+ +P L N+MI + + G +L LF ML G+ PD YT +I + L
Sbjct: 81 ELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTYPFVIKACGDYLLPE 140
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G IH + S FDS +V + L++MY C M A VF+ + LV+W+ +I GY
Sbjct: 141 MGALIHARTVMSGFDSDAFVQNSLMAMYMNCGEMEVARRVFDLMRERTLVSWNTMINGYF 200
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G +AL F + +G + D + SVL + + G +H V +
Sbjct: 201 KNGCVKEALMVFDWMIGKGIEPDCATVVSVLPVCSYLKELEVGRRVHALVEVKNLGEDIS 260
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V ++L+DMY+KCG + +F M +R+++++ +++ G L+G A + + +
Sbjct: 261 VWNSLLDMYAKCGNMDEAQMIFYEMDKRDVVSWTTMMNGYILNGDARSALLLCQMMQFES 320
Query: 403 LNPDESTFSALLCAC 417
+ P+ T +++L AC
Sbjct: 321 VKPNFVTLASVLSAC 335
>gi|297830924|ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329184|gb|EFH59603.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 167/523 (31%), Positives = 276/523 (52%), Gaps = 11/523 (2%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
++D F + + +YA L S+R +FD +R++ +WN++I Y ++ LF
Sbjct: 252 VKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLE 311
Query: 95 LLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD--SITSSALVTAYSK 151
+ + ++ D T+ A S + R HG VS R+ + ++L+ YS+
Sbjct: 312 AIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHG--FVSKNFRELPIVIINSLMVMYSR 369
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
+ ++ VF + + D+V N+MIS F G D+ L L M + G D T+ L
Sbjct: 370 CGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 429
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF--NSLFHP 269
+S +G+ HGF ++ ++ ++S L+ MYA+ + + +F +
Sbjct: 430 LSAASNLRNKEIGKQTHGFLIRQGIQ-FEGMNSYLIDMYAKSGLIRISQKLFEGSGYAER 488
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D TW+++I+GY+Q G + FRK+ Q + + V +AS+L A ++ +V G +H
Sbjct: 489 DQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAVTVASILPACSQVGSVDLGKQLH 548
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
G+ I+ + +V V+SALVDMYSK G + +F ERN +TY ++ILG G HG
Sbjct: 549 GFSIRQYLDQNVFVASALVDMYSKAGAIKYAENMFSQTKERNSVTYTTMILGYGQHGMGE 608
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+A F + E G+ PD F A+L AC + GLV++G +IF M E Y IQ +EHY +
Sbjct: 609 RAISLFLSMQELGIKPDAIAFVAVLSACSYSGLVDEGLKIFEDMREVYNIQPSSEHYCCI 668
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVDPA-VSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
+LG G + EAY F+ L + + A + G+LL C ++G +LAE V+ +L + D K
Sbjct: 669 TDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCRLHGELELAETVSERLAKLDKGK 728
Query: 509 G--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y+V+LSN YAE+ W V ++R + + GL+KE G S +
Sbjct: 729 NFSGYEVLLSNMYAEEQNWKSVDRVRKGMREKGLKKEVGRSGI 771
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 201/381 (52%), Gaps = 14/381 (3%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
R +FD +++V WN++I Y R +A F ++R ++KP ++ + A + +
Sbjct: 172 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATS 231
Query: 118 SDLPGLRFVHGGAIVSGLG----RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
+ +G ++ LG +D S+ ++ Y++L ++ + +VFD + ++ +
Sbjct: 232 RSIKKANVFYG--LMLKLGDEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVW 289
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGK---TPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
N+MI + +S++LF + +G DE T + S + + +G+ HGF
Sbjct: 290 NTMIGVYVQNDCLVESIELF--LEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGF 347
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
K+ + + + L+ MY+RC + ++ VF+S+ D+V+W+ +I+ + Q G +
Sbjct: 348 VSKNFRELPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEG 407
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L ++ QG K D + + ++L+AA+ N G HG++I+ G + M +S L+DM
Sbjct: 408 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQGIQFEGM-NSYLIDM 466
Query: 351 YSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
Y+K G + + ++FE +ER+ T+NS+I G +G T + F FR ++E+ + P+
Sbjct: 467 YAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNAV 526
Query: 409 TFSALLCACCHGGLVNDGREI 429
T +++L AC G V+ G+++
Sbjct: 527 TVASILPACSQVGSVDLGKQL 547
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 181/399 (45%), Gaps = 32/399 (8%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ--LKPDNFTYACITRAC 114
AR LFD P+ + LWN+II + + ++A + + +T K D +TY+ +AC
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTKCDAYTYSSTLKAC 117
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAY--------SKLSLI--DEAIKVFDG 164
+E +L + VH I + ++L+ Y S+L D KVFD
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPGSELDCFEYDVVRKVFDN 177
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ ++V N++IS + G ++ + F M+R+ P + V + + +
Sbjct: 178 MRRKNVVAWNTLISWYVKTGRNAEACRQFAIMMRMEIKPSPVSFVNVFPAVATSRSIKKA 237
Query: 225 QGIHGFCLKSSFDSYD---YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+G LK D Y +V S +SMYA + S+ VF+S ++ W+ +I Y
Sbjct: 238 NVFYGLMLKLG-DEYVKDLFVVSSAISMYAELGDLESSRRVFDSCVERNIEVWNTMIGVY 296
Query: 282 SQQGDYGKALYYFRKLNMQGKK---ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
Q +++ F L G K +D V +A + V G HG+V ++ E
Sbjct: 297 VQNDCLVESIELF--LEAIGSKEIVSDEVTFLLAASAVSGLQQVELGRQFHGFVSKNFRE 354
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
L +++ ++L+ MYS+CG++ VF +M ER+++++N++I +G + ++
Sbjct: 355 LPIVIINSLMVMYSRCGFVQKSFGVFHSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEM 414
Query: 399 IEKGLNPDESTFSALLCAC-----------CHGGLVNDG 426
++G D T +ALL A HG L+ G
Sbjct: 415 QKQGFKIDYITVTALLSAASNLRNKEIGKQTHGFLIRQG 453
>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 258/511 (50%), Gaps = 23/511 (4%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAK-----SLFKNLLRTQLKPDNFT-- 106
LPS IL F N +IR L R N + S+F + + +L P ++
Sbjct: 6 LPSKNILG--------FTANFLIRCKILPRRSNTSSLSRNISVFASYEQEELSPGRYSDE 57
Query: 107 --------YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+ I + C+ N + + HG + L D S+ L+ AYSK ++ A
Sbjct: 58 FNVVQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELA 117
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+VFDG+ + LV N+MI + ++L +F M G E+T+ ++S
Sbjct: 118 RQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGAN 177
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+ +H +K+S D YV + L+ +YA+C +N A VF S+ VTWS+++
Sbjct: 178 CDALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMV 237
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
GY Q +Y +AL +R+ + + ++SV+ A + A + G +H + + GF
Sbjct: 238 AGYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFG 297
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V V+S+ VDMY+KCG L +F + E+NI +N++I G H + F +
Sbjct: 298 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKM 357
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ G++P+E TFS+LL C H GLV +GR F M YG+ HY MV +LG AG
Sbjct: 358 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 417
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
L EAY I S+P ++ G+LL+ C + N +LAE+ A +LFE +P V+LSN
Sbjct: 418 LSEAYELIKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNI 477
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA + +W+++ K R + D ++K G SW+
Sbjct: 478 YAANKQWEEIAKSRKLLRDCDVKKVRGQSWI 508
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 172/360 (47%), Gaps = 1/360 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+L + ++ K H + L D + L+ Y+ + AR +FD +RS
Sbjct: 69 ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGMLERS 128
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I Y ++A +F + K FT + + AC N D + +H
Sbjct: 129 LVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLHC 188
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
++ + L + +AL+ Y+K +I++A++VF+ + D V +SM++G+ +++
Sbjct: 189 LSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSKNYEE 248
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L L+ R+ +++TL +I + L G+ +H KS F S +V+S V
Sbjct: 249 ALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASSAVD 308
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + +Y +F+ + ++ W+ +I+G+++ + + F K+ G + V
Sbjct: 309 MYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVT 368
Query: 309 IASVLAAAAKSANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+S+L+ + V G + +G +V+ S +VD+ + G L ++ +++
Sbjct: 369 FSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 428
>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 823
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 157/526 (29%), Positives = 275/526 (52%), Gaps = 2/526 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K R+ F T L+ Y+L + AR +FD + W +++ Y+
Sbjct: 170 IHACACKLGHDRNAFVGTALIDAYSLCGAVCHARCVFDGIVGKDAVTWTAMVSCYSENDI 229
Query: 85 FNDAKSLFKNLLRTQLKPDNFTY-ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A + F + T KP+ F + + A +S L G + +HG ++ + +
Sbjct: 230 PEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLG-KGIHGCSVKTLYDTEPHVGG 288
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+ Y+K I++A +F+ + D++L + +IS +A +++ ++F M+R P
Sbjct: 289 ALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVP 348
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+E++L G++ + L +G+ IH +K ++S +V + L+ MYA+C M ++ +F
Sbjct: 349 NEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIF 408
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+SL + V+W+ +I GY Q G AL F ++ + V +SVL A A ++++
Sbjct: 409 SSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIK 468
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
IH + + F +V ++L+D Y+KCG++ ++VFE++ E +++++NS+I
Sbjct: 469 HAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYA 528
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
LHG A E F + + + ++ TF +LL C GLVN G +F M ++ I+
Sbjct: 529 LHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSM 588
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY +V+LLG AG L +A FI +P P V ALLS C ++ N L A ++ +
Sbjct: 589 EHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLD 648
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P V+LSN YA G D+V R + + G++KEAG+SWV
Sbjct: 649 IEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLSWV 694
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 198/396 (50%), Gaps = 2/396 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F A L+ YA L +AR LFD P+R+ + ++++ YAL F +A LF+ L
Sbjct: 81 DTFCANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQ 140
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R + ++F I + D PGL +H A G R++ +AL+ AYS +
Sbjct: 141 REGHEVNHFVLTTILKVLV-TMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAV 199
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A VFDG+ D V +M+S ++ + +L F M G P+ + L +
Sbjct: 200 CHARCVFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAA 259
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S +G+GIHG +K+ +D+ +V L+ MYA+C + A+ +F + H D++ WS
Sbjct: 260 VCLSSALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWS 319
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
LI+ Y+Q +A F ++ + ++ VL A A A + G IH I+
Sbjct: 320 FLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKL 379
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G+E + V +AL+DMY+KC + +++F ++ + N +++N++I+G GF A F
Sbjct: 380 GYESELFVGNALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVF 439
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++ + + TFS++L AC + + +I +
Sbjct: 440 HEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHS 475
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 167/348 (47%), Gaps = 4/348 (1%)
Query: 86 NDAKSLFKNLLRTQLKPDNFTYAC--ITRACSENSDLPGLRFVHGGAIVSG--LGRDSIT 141
N+A + L + P +YAC + C D R VH + G D+
Sbjct: 25 NEALQWLDDELASLALPKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFC 84
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++ L+ Y+KL + A ++FDG+ + + V +++ G+A G ++++L+LF + R G
Sbjct: 85 ANVLLNFYAKLGPLATARRLFDGMPERNRVSFVTLMQGYALRGEFEEALELFRRLQREGH 144
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ + L ++ L + GIH K D +V + L+ Y+ C + A
Sbjct: 145 EVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVGTALIDAYSLCGAVCHARC 204
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+ + D VTW+A+++ YS+ AL F K+ M G K +P ++ S L AA ++
Sbjct: 205 VFDGIVGKDAVTWTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSS 264
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G IHG ++ ++ V AL+DMY+KCG + +FE + ++I ++ +I
Sbjct: 265 ALLGKGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISR 324
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
QAFE F ++ + P+E + S +L AC + + G +I
Sbjct: 325 YAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQI 372
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 158/336 (47%), Gaps = 1/336 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H K +P L+ +YA + A +F+ P V LW+ +I YA +
Sbjct: 269 KGIHGCSVKTLYDTEPHVGGALLDMYAKCGDIEDAHAIFEMIPHDDVILWSFLISRYAQS 328
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A +F ++R+ + P+ F+ + + +AC+ + L +H AI G +
Sbjct: 329 CQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVG 388
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K ++ ++++F + D + V N++I G+ GF + +L +F M
Sbjct: 389 NALMDMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHML 448
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+ T ++ S + IH KS+F++ V + L+ YA+C + A V
Sbjct: 449 STQVTFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKV 508
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F S+ D+V+W+++I+ Y+ G AL F ++N KA+ V S+L+ + V
Sbjct: 509 FESIVECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLV 568
Query: 323 WPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + + ++ H + S+ + +V + + G L
Sbjct: 569 NQGLWLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRL 604
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 137/318 (43%), Gaps = 15/318 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + L +++H L K + F L+ +YA + ++ +F +
Sbjct: 356 VLQACANIAFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCRNMENSLEIFSSLQDAN 415
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WN+II Y + DA S+F + + T++ + RAC+ S + +H
Sbjct: 416 EVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHS 475
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
S D+I ++L+ Y+K I +A+KVF+ + + D+V NS+IS +A G
Sbjct: 476 LIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATN 535
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC-------LKSSFDSYDY 241
+L+LFD M + ++ T V L+S L V QG+ F +K S + Y
Sbjct: 536 ALELFDRMNKSDIKANDVTFVSLLSVCGSTGL--VNQGLWLFNSMMMDHRIKPSMEHY-- 591
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRK-LNM 299
+ +V + R + A + P + W AL++ + Y K L++
Sbjct: 592 --TCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVLDI 649
Query: 300 QGKKADPVLIASVLAAAA 317
+ ++ S + AAA
Sbjct: 650 EPHDETTYVLLSNMYAAA 667
>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Glycine max]
Length = 573
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/428 (33%), Positives = 234/428 (54%), Gaps = 1/428 (0%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+R VH + +G +D + ++ L+ Y++ ID+A +FDG++ D + M+ GFA
Sbjct: 19 IRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAK 78
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G F +LR G TPD YTL +I + + L +G+ IH LK S +V
Sbjct: 79 AGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFV 138
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ LV MYA+C + A +F + DLVTW+ +I Y+ Y ++L F ++ +G
Sbjct: 139 CASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAY-ESLVLFDRMREEGV 197
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D V + +V+ A AK + + Y++++GF L V++ +A++DMY+KCG + +
Sbjct: 198 VPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESARE 257
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF+ M E+N+I+++++I G HG A + F ++ + P+ TF +LL AC H GL
Sbjct: 258 VFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGL 317
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
+ +G F M EE+ ++ +HY MV LLG AG L+EA I ++ D + ALL
Sbjct: 318 IEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C I+ +LAE A+ L E P+ + V+LSN YA+ G+W+ V K RD + L+K
Sbjct: 378 GACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRKLKK 437
Query: 543 EAGVSWVS 550
G +W+
Sbjct: 438 IPGWTWIE 445
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 169/360 (46%), Gaps = 2/360 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++HA V L+D A KL+ YA + + A LFD R W+ ++ +A A
Sbjct: 20 RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDSKTWSVMVGGFAKA 79
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ F+ LLR + PDN+T + R C + +DL R +H + GL D
Sbjct: 80 GDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVC 139
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LV Y+K ++++A ++F+ + DLV MI +A C ++ SL LFD M G
Sbjct: 140 ASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCNAYE-SLVLFDRMREEGVV 198
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ +V +++ + + + + + +++ F + + ++ MYA+C + SA V
Sbjct: 199 PDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVESAREV 258
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + ++++WSA+I Y G A+ F + + V S+L A + + +
Sbjct: 259 FDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLI 318
Query: 323 WPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G + +H V + +VD+ + G L +++ E M+ S +LG
Sbjct: 319 EEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLG 378
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 141/324 (43%), Gaps = 15/324 (4%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
V+ + L + +H +V K LL D F LV +YA V+ A+ LF++ +
Sbjct: 106 FVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSK 165
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ W +I AYA + + ++ LF + + PD + AC++ + RF +
Sbjct: 166 DLVTWTVMIGAYADCNAY-ESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFAN 224
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ +G D I +A++ Y+K ++ A +VFD + + +++ ++MI+ + + G
Sbjct: 225 DYIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGK 284
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++ LF ML P+ T V L+ +GL E L ++ Y
Sbjct: 285 DAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHY--- 341
Query: 243 SSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITG---YSQQGDYGKALYYFRKLN 298
+ +V + R ++ A + ++ D WSAL+ +S+ KA +L
Sbjct: 342 -TCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQ 400
Query: 299 MQGKKADPVLIASVLAAAAKSANV 322
Q VL++++ A A K V
Sbjct: 401 PQN-PGHYVLLSNIYAKAGKWEKV 423
>gi|147771783|emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 248/498 (49%), Gaps = 33/498 (6%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+VF+WN++IR L + LR L+P+ T+ + +A ++
Sbjct: 53 NVFVWNTMIRKQVENGLITRDPPLLYYMQGLRAGLRPNGHTFMYLLKALVSGQEVKEGEE 112
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH + +G S AL+ Y L+ + +VFD + P LVL +I + F
Sbjct: 113 VHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTLIIRAYVCVTF 172
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+K+L+LF M +G TPD + ++S L V + +H F KS + +VSS
Sbjct: 173 PEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSGIEVDAFVSST 232
Query: 246 LVSMYARCNCMNSAYH-----------VFNSLFHP--------------------DLVTW 274
L+S Y C ++ AY V+N++ H D+V+W
Sbjct: 233 LISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQSMPDRDVVSW 292
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+++I G+++ G Y +AL +F ++ G + + + S L+A A + GA IH YV +
Sbjct: 293 NSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDK 352
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ + S+L+DMYSKCG + +Q+FE + R++ T+ S++ GL +HG +A +
Sbjct: 353 NDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAMHGRGEKALHY 412
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F + E + PD+ T +L AC H GL++ G F M + +G+ K EHY MV LLG
Sbjct: 413 FSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQSMEKVFGLVPKVEHYGXMVDLLG 472
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
G L+EAY I +P + + GA LS C ++ N +L E+ A +L PR +VM
Sbjct: 473 RMGCLKEAYDLIMGMPMEANEIIWGAFLSACRVHNNVELGEVAARRLLGLXPRDPWARVM 532
Query: 515 LSNTYAEDGRWDDVMKLR 532
LSN YAE+ +WD M LR
Sbjct: 533 LSNMYAEEAKWDRSMGLR 550
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 145/337 (43%), Gaps = 31/337 (9%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S Q + +E+HA V + F + L+ Y ++ R +FD+ Q + LW
Sbjct: 103 SGQEVKEGEEVHASVVRTGFACSEFVSGALLGFYVACGLVGKGRQVFDEMRQPGLVLWTL 162
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
IIRAY A LF+ + L PD + + AC DL + +H SG
Sbjct: 163 IIRAYVCVTFPEKALELFRTMREVGLTPDMVAVSTVVSACGLLGDLGVAKAMHCFIEKSG 222
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIK-------------------------------VFD 163
+ D+ SS L++ Y + +D A + +F
Sbjct: 223 IEVDAFVSSTLISTYGECGSLDYAYRFFQETPMKNIVVWNTMIHQSVEHNNLELGKQLFQ 282
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ D D+V NSMI GFA G + ++L F M G +P+ TL+ +S L
Sbjct: 283 SMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLSTLSACASHGALDT 342
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G IH + K+ + + S L+ MY++C ++ A +F DL TW++++ G +
Sbjct: 343 GAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDLFTWTSIVCGLAM 402
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
G KAL+YF K+ + D V + VL+A A +
Sbjct: 403 HGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAG 439
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 106/235 (45%), Gaps = 10/235 (4%)
Query: 51 NNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI 110
+N L + LF P R V WNS+I +A ++ +A + F + + + P+ T
Sbjct: 271 HNNLELGKQLFQSMPDRDVVSWNSMIGGFARIGQYQEALTWFHEMEFSGVSPNALTLLST 330
Query: 111 TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDL 170
AC+ + L ++H + + RD S+L+ YSK ID+A+++F+ + DL
Sbjct: 331 LSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDIDKAVQIFEESTRRDL 390
Query: 171 VLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG----QG 226
S++ G A G +K+L F M PD+ T+VG++S LL G Q
Sbjct: 391 FTWTSIVCGLAMHGRGEKALHYFSKMKEAQVQPDDVTMVGVLSACAHAGLLDQGWWYFQS 450
Query: 227 IHG-FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
+ F L + Y +V + R C+ AY + + + + W A ++
Sbjct: 451 MEKVFGLVPKVEHY----GXMVDLLGRMGCLKEAYDLIMGMPMEANEIIWGAFLS 501
>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Glycine max]
Length = 733
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 155/526 (29%), Positives = 262/526 (49%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K+ L+ F ++ L+ +Y + +F+K R+V W +II A
Sbjct: 146 LHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGY 205
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ F + R+++ D+ T+A +A +++S L + +H I G S +
Sbjct: 206 NMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTIKQGFDESSFVINT 265
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L T Y+K D +++F+ + PD+V ++IS + G + +++ F M + +P+
Sbjct: 266 LATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPN 325
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+YT +IS + G+ IHG L+ + V++ ++++Y++C + SA VF+
Sbjct: 326 KYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFH 385
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+++WS +I+ YSQ G +A Y + +G K + ++SVL+ A +
Sbjct: 386 GITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQ 445
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H +++ G + MV SA++ MYSKCG + ++F M +II++ ++I G
Sbjct: 446 GKQVHAHLLCIGIDHEAMVHSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAE 505
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG++ +A F I GL PD F +L AC H G+V+ G F MT Y I E
Sbjct: 506 HGYSQEAINLFEKISSVGLKPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKE 565
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY ++ LL AG L EA I S+P D V LL C ++G+ D A QL +
Sbjct: 566 HYGCLIDLLCRAGRLSEAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQL 625
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
DP + L+N YA GRW + +R + G+ KE G SWV+
Sbjct: 626 DPNSAGTHITLANIYAAKGRWKEAAHIRKLMKSKGVIKERGWSWVN 671
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 205/410 (50%), Gaps = 2/410 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITR 112
L AR +FDK R W ++I Y A +A LF N+ + + D F + +
Sbjct: 73 LCKARYMFDKMTHRDEISWTTLIAGYVNASDSYEALILFSNMWVHPGPQRDQFMISVALK 132
Query: 113 ACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
AC+ ++ +HG ++ SGL SSAL+ Y K+ I++ +VF+ + ++V
Sbjct: 133 ACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKVGKIEQGCRVFEKMMTRNVVS 192
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
++I+G H G+ + L F M R D +T + + SLL G+ IH +
Sbjct: 193 WTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIALKASADSSLLHHGKAIHTQTI 252
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
K FD +V + L +MY +C + +F + PD+V+W+ LI+ Y Q G+ A+
Sbjct: 253 KQGFDESSFVINTLATMYNKCGKPDYVMRLFEKMRMPDVVSWTTLISTYVQMGEEEHAVE 312
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F+++ + A+V+++ A A G IHG+V++ G ++ V+++++ +YS
Sbjct: 313 AFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVANSIITLYS 372
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG L VF ++ ++II+++++I G+ +AF++ + +G P+E S+
Sbjct: 373 KCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGPKPNEFALSS 432
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+L C L+ G+++ + GI + + ++ + G+++EA
Sbjct: 433 VLSVCGSMALLEQGKQVHAHLL-CIGIDHEAMVHSAIISMYSKCGSVQEA 481
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 134/281 (47%), Gaps = 10/281 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V + L+ A ++ LY+ +L SA ++F ++ + W++II Y+
Sbjct: 346 EQIHGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQG 405
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A + R KP+ F + + C + L + VH + G+ +++
Sbjct: 406 GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVH 465
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SA+++ YSK + EA K+F+G+ D++ +MI+G+A G+ +++ LF+ + +G
Sbjct: 466 SAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLK 525
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS-----VLVSMYARCNCMN 257
PD +G+++ ++ + G + F L ++ Y S L+ + R ++
Sbjct: 526 PDYVMFIGVLTACNHAGMVDL--GFYYFMLMTNV--YRISPSKEHYGCLIDLLCRAGRLS 581
Query: 258 SAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
A H+ S+ FH D V WS L+ GD + + +L
Sbjct: 582 EAEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQL 622
>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 282/593 (47%), Gaps = 63/593 (10%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
++ K+LH L+ K+ + F L+ Y+ + AR +FDK PQ + F WN+++ AY
Sbjct: 22 TQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNTMLSAY 81
Query: 80 ALAHRFNDAKSLFKNLLRTQ--------------------------------LKPDNFTY 107
+ + + + +F + L + T+
Sbjct: 82 SKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITF 141
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
+ + S + R +HG + G G S+LV Y+K+ L+ A +VFD V +
Sbjct: 142 STMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQE 201
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLF---------DW----------------------M 196
++V+ N+MI+G G S +LF W M
Sbjct: 202 RNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEAEAMDLFRDM 261
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G D+YT +++ L G+ IH ++S ++ +V S LV MY +C +
Sbjct: 262 RQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSV 321
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF + + ++V+W+A++ GY Q G +A+ F + G + D + SV+++
Sbjct: 322 RYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSC 381
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A++ GA H + G + VS+AL+ +Y KCG + Q+F+ MS R+ +++
Sbjct: 382 ANLASLEEGAQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWT 441
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+++ G G + + F ++ +GL PD TF A+L AC GLV G++ F M ++
Sbjct: 442 ALVSGYAQFGKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKD 501
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+GI ++HY M+ L G AG LEEA +FI +P D LLS C +YGN ++ +
Sbjct: 502 HGIIPFSDHYTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKW 561
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A L E DP+ A ++LS+ YA G+W +V +LR + + G RKE G SW+
Sbjct: 562 AAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWI 614
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 169/380 (44%), Gaps = 63/380 (16%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP--- 168
+ C E + + +H I S ++ + L+ AYSKL I A VFD + P
Sbjct: 13 KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72
Query: 169 ----------------------------DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
D V NS+ISG+ G ++++ ++ M++ G
Sbjct: 73 SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132
Query: 201 K-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
+ T ++ + + +G+ IHG +K F +Y +V S LV MYA+ ++ A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192
Query: 260 YHVFNS---------------------------LFH----PDLVTWSALITGYSQQGDYG 288
VF+ LFH D ++W+ +ITG Q G
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+A+ FR + +G D SVL A + G IH +I+ G+ +V V SALV
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALV 312
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
DMY KC + VF+ M+ +N++++ ++++G G +GF+ +A F D+ G+ PD+
Sbjct: 313 DMYCKCRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDF 372
Query: 409 TFSALLCACCHGGLVNDGRE 428
T +++ +C + + +G +
Sbjct: 373 TLGSVISSCANLASLEEGAQ 392
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 152/311 (48%), Gaps = 6/311 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L KE+H L+ ++ + F + LV +Y + A +F + ++V W +++
Sbjct: 284 RALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKRMANKNVVSWTAML 343
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y +A +F ++ R ++PD+FT + +C+ + L H A+VSGL
Sbjct: 344 VGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLI 403
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S+AL+T Y K I+++ ++FD +S D V +++SG+A G ++++ LF+ M
Sbjct: 404 SFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERM 463
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS-SFDSYDYVSSVLVSMYARCNC 255
L G PD T + ++S L+ GQ LK + + ++ ++ R
Sbjct: 464 LVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGR 523
Query: 256 MNSAYHVFNSL-FHPDLVTWSALITGYSQQG--DYGK-ALYYFRKLNMQGKKADPVLIAS 311
+ A + N + F PD + W+ L++ G + GK A +L+ Q A +L++S
Sbjct: 524 LEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQ-NPAGYILLSS 582
Query: 312 VLAAAAKSANV 322
+ AA K +NV
Sbjct: 583 IYAAKGKWSNV 593
>gi|449443954|ref|XP_004139740.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g09040, mitochondrial-like [Cucumis sativus]
Length = 1441
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 171/533 (32%), Positives = 275/533 (51%), Gaps = 12/533 (2%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH ++ K + F A LV +YA + L AR F+ WN+II Y
Sbjct: 431 QLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEE 490
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
++A +F+ ++ + PD + A I AC+ +L + H + GL + S
Sbjct: 491 YNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGS 550
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+ Y K ++ A VF + ++V N++I+G+ G ++++ LF + +G P
Sbjct: 551 SLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKP 609
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV- 262
E T GL+ G +L++G+ IHG +K F S SS +V + C MNS V
Sbjct: 610 TEVTFAGLLDGCDGAFMLNLGRQIHGQVMKWGFLS----SSEMVCVSLLCLYMNSQRFVD 665
Query: 263 ----FNSLFHPD-LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
F+ L +P LV W+ALI+GY+QQ + KAL +++ + D ASVL A A
Sbjct: 666 SETLFSELQYPKGLVVWTALISGYAQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACA 725
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN-IITYN 376
+++ G IH + GF + + S+L+DMY+KCG + +QVF M RN +I++N
Sbjct: 726 GMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRNNVISWN 785
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I+GL +G+ +A E F+ + ++ + PDE TF +L AC H G V++GR++F M
Sbjct: 786 SMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACSHAGRVSEGRKVFDLMVNN 845
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
Y + + +H MV +LG G L EA FI L DP + LL C +G+ +
Sbjct: 846 YKLLPRVDHLGCMVDILGRWGFLNEAEEFINKLGCKADPMLWSTLLGACRKHGDEVRGKR 905
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +L E P+ + V+LS+ YAE W + LR ++ G++K G SW+
Sbjct: 906 AADKLMELKPQSSSSYVLLSSIYAESENWSGAVSLRREMKLKGVKKLPGYSWI 958
Score = 202 bits (514), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 204/408 (50%), Gaps = 2/408 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D +V Y L AR LF + P +V WN +I +A +A S F L
Sbjct: 242 DQITLVTVVNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELK 301
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+T LK + + A + S L VH A GL + SALV Y+K S +D
Sbjct: 302 KTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMD 361
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +VF+ + + ++VL N+M+ GFA G + ++ F M R G PDE+T + S
Sbjct: 362 AAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACA 421
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
L+ G +H +K+ F S +V++ LV MYA+ + A F + D V+W+A
Sbjct: 422 SLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELMKIHDNVSWNA 481
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I GY Q+ +A + FR++ G D V +AS+++A A + G H +++ G
Sbjct: 482 IIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQQCHCLLVKVG 541
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+ S S+L+DMY KCG + VF +M RN+++ N++I G + G +A F+
Sbjct: 542 LDTSTCAGSSLIDMYVKCGVVLAARDVFYSMPSRNVVSVNALIAGYTM-GHLEEAIHLFQ 600
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+I GL P E TF+ LL C ++N GR+I ++ ++G + +E
Sbjct: 601 EIQMVGLKPTEVTFAGLLDGCDGAFMLNLGRQIHGQVM-KWGFLSSSE 647
Score = 188 bits (477), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 35/419 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+LS K +H+ K + +V LY + A+ F + ++ VF WNS++
Sbjct: 55 QALSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVL 114
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y F F + +++P+ FT+A + ACS D+ R VH G +G G
Sbjct: 115 SMYLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFG 174
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S L+ Y+K + +A VFDG + D V ++I+G+ GF +++++FD M
Sbjct: 175 FRSFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRM 234
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R+G PD+ TLV +V+ Y +
Sbjct: 235 QRVGHAPDQITLV-----------------------------------TVVNAYVALGRL 259
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A +F + +P++V W+ +I+G++++G +A+ +F +L G KA + SVL+A
Sbjct: 260 ADARKLFTQIPNPNVVAWNVMISGHAKRGFAEEAISFFLELKKTGLKATRSSLGSVLSAI 319
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + + G+++H + G + +V V SALV+MY+KC + QVF ++ ERNI+ +N
Sbjct: 320 ASLSMLNYGSMVHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWN 379
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+++ G +G + EFF + G PDE TF+++ AC +N G ++ T M +
Sbjct: 380 AMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIK 438
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/421 (26%), Positives = 197/421 (46%), Gaps = 35/421 (8%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL Q ++ +++H V K F L+ +YA L AR++FD
Sbjct: 147 MVLSACSGLQDVNFGRQVHCGVFKTGFGFRSFCQGGLIDMYAKCRYLRDARLVFDGALNL 206
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
W ++I Y +A +F + R PD T +
Sbjct: 207 DTVSWTALIAGYVRDGFPMEAVKVFDRMQRVGHAPDQITLVTV----------------- 249
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
V AY L + +A K+F + +P++V N MISG A GF +
Sbjct: 250 ------------------VNAYVALGRLADARKLFTQIPNPNVVAWNVMISGHAKRGFAE 291
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ F + + G +L ++S + S+L+ G +H K D YV S LV
Sbjct: 292 EAISFFLELKKTGLKATRSSLGSVLSAIASLSMLNYGSMVHAQATKEGLDDNVYVGSALV 351
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+C+ M++A VFNSL ++V W+A++ G++Q G + + +F + G + D
Sbjct: 352 NMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGLAQEVMEFFSCMKRHGPQPDEF 411
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
S+ +A A + G +H +I++ F ++ V++ALVDMY+K G L + FE M
Sbjct: 412 TFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANALVDMYAKSGALKEARKQFELM 471
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ +++N++I+G + +AF FR ++ G+ PDE + ++++ AC + + G+
Sbjct: 472 KIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPDEVSLASIVSACANVQELKRGQ 531
Query: 428 E 428
+
Sbjct: 532 Q 532
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 198/409 (48%), Gaps = 3/409 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA K L + + + LV +YA + + +A+ +F+ +R++ LWN+++ +A
Sbjct: 331 VHAQATKEGLDDNVYVGSALVNMYAKCSKMDAAKQVFNSLGERNIVLWNAMLGGFAQNGL 390
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ F + R +PD FT+ I AC+ L +H I + + ++A
Sbjct: 391 AQEVMEFFSCMKRHGPQPDEFTFTSIFSACASLHYLNFGGQLHTVMIKNKFASNLFVANA 450
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K + EA K F+ + D V N++I G+ + D++ +F M+ G PD
Sbjct: 451 LVDMYAKSGALKEARKQFELMKIHDNVSWNAIIVGYVQEEYNDEAFFMFRRMVSNGVLPD 510
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
E +L ++S L GQ H +K D+ S L+ MY +C + +A VF
Sbjct: 511 EVSLASIVSACANVQELKRGQQCHCLLVKVGLDTSTCAGSSLIDMYVKCGVVLAARDVFY 570
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S+ ++V+ +ALI GY+ G +A++ F+++ M G K V A +L + +
Sbjct: 571 SMPSRNVVSVNALIAGYT-MGHLEEAIHLFQEIQMVGLKPTEVTFAGLLDGCDGAFMLNL 629
Query: 325 GAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGL 382
G IHG V++ GF S MV +L+ +Y +F E + ++ + ++I G
Sbjct: 630 GRQIHGQVMKWGFLSSSEMVCVSLLCLYMNSQRFVDSETLFSELQYPKGLVVWTALISGY 689
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+A +F++ + + PD++ F+++L AC + +G+EI +
Sbjct: 690 AQQNHHEKALQFYQHMRSDNILPDQAAFASVLRACAGMSSLQNGQEIHS 738
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 111/251 (44%), Gaps = 5/251 (1%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
LS + IH LK + +V+V +Y +C ++ A F+ L D+ W+++++
Sbjct: 57 LSTAKVIHSKSLKIGVGLKGLLGNVIVDLYVKCGNVDFAQKAFSRLEKKDVFAWNSVLSM 116
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y G + + F + + + A VL+A + +V G +H V + GF
Sbjct: 117 YLDHGLFATVVQSFVCMWNHEVRPNEFTFAMVLSACSGLQDVNFGRQVHCGVFKTGFGFR 176
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
L+DMY+KC YL VF+ + +++ ++I G GF +A + F +
Sbjct: 177 SFCQGGLIDMYAKCRYLRDARLVFDGALNLDTVSWTALIAGYVRDGFPMEAVKVFDRMQR 236
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G PD+ T ++ A G + D R++FT++ + + M+ G E
Sbjct: 237 VGHAPDQITLVTVVNAYVALGRLADARKLFTQIPNPNVVA-----WNVMISGHAKRGFAE 291
Query: 461 EAYSFIWSLPK 471
EA SF L K
Sbjct: 292 EAISFFLELKK 302
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 1/108 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR- 67
VL SL +E+H+L+ D + L+ +YA + + +F + P+R
Sbjct: 720 VLRACAGMSSLQNGQEIHSLIFHTGFNMDEVTCSSLIDMYAKCGDVKGSLQVFREMPRRN 779
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+V WNS+I A +A +FK + + + PD T+ + ACS
Sbjct: 780 NVISWNSMIVGLAKNGYAEEALEIFKQMEQQSIIPDEVTFLGVLSACS 827
>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
Length = 929
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 263/519 (50%), Gaps = 38/519 (7%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W ++I +A S+F+ ++ +KP++ T A AC+ S L R +H
Sbjct: 326 NVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIH 385
Query: 128 GGAI-VSGLGRDSITSSALVTAYSKLSLID------------------------------ 156
G I V L D + ++LV Y+K ++
Sbjct: 386 GYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSH 445
Query: 157 -EAIKV-----FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
EAI++ F G+ +PD++ N +++GF G +L+ F M +G P+ T+ G
Sbjct: 446 EEAIELLSEMKFQGI-EPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISG 504
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++ + L +G+ IHG+ L++ + V S L+SMY+ C+ + A VF+ L D
Sbjct: 505 ALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRD 564
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
+V W+++I+ +Q G AL R++N+ + + V + S L A +K A + G IH
Sbjct: 565 VVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQ 624
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
++I+ G + + ++L+DMY +CG + ++F+ M +R+++++N +I G+HGF
Sbjct: 625 FIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMD 684
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A F+ GL P+ TF+ LL AC H GL+ +G + F M EY + E Y MV
Sbjct: 685 AVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMMKTEYAMDPAVEQYACMV 744
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
LL AG E FI +P + AV G+LL C I+ N DLAE A LFE +P+
Sbjct: 745 DLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQSSG 804
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+++N Y+ GRW+D K+R + + G+ K G SW+
Sbjct: 805 NYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWI 843
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/414 (27%), Positives = 188/414 (45%), Gaps = 76/414 (18%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR F++ + VF+WN ++ Y +K FK L+ CI
Sbjct: 244 ARRFFEEIEFKDVFMWNIMVSGYT-------SKGEFKKALK-----------CI------ 279
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF---DGVSD--PDLV 171
SD+ +SG+ D +T +A+++ Y++ +EA K F G+ D P++V
Sbjct: 280 -SDMK----------LSGVKPDQVTWNAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVV 328
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
++I+G G+ ++L +F M+ G P+ T+ +S SLL G+ IHG+C
Sbjct: 329 SWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYC 388
Query: 232 LK-SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA-------------- 276
+K DS V + LV YA+C + A F + DLV+W+A
Sbjct: 389 IKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEA 448
Query: 277 ---------------------LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
L+TG++Q GD AL +F++++ G + I+ LAA
Sbjct: 449 IELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAA 508
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ N+ G IHGYV+++ ELS V SAL+ MYS C L + VF +S R+++ +
Sbjct: 509 CGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVW 568
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
NS+I G + A + R++ + + T + L AC + G+EI
Sbjct: 569 NSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEI 622
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/512 (23%), Positives = 230/512 (44%), Gaps = 38/512 (7%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA + + F ++L+ +Y + AR +FDK +R+VF W +I+ Y
Sbjct: 110 QVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLG 169
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ + LF ++ ++PD+F + + +ACSE + + V+ + G +S
Sbjct: 170 DYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKG 229
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+++ + K +D A + F+ + D+ + N M+SG+ G + K+L+ M G P
Sbjct: 230 SILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKP 289
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D+ T +ISG + GQ ++ S + M +
Sbjct: 290 DQVTWNAIISGYAQS-----GQ-------------FEEASKYFLEMGGLKD--------- 322
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
F P++V+W+ALI G Q G +AL FRK+ ++G K + + IAS ++A + +
Sbjct: 323 ---FKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLR 379
Query: 324 PGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IHGY I+ + ++V ++LVD Y+KC + + + F + + +++++N+++ G
Sbjct: 380 HGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAGY 439
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
L G +A E ++ +G+ PD T++ L+ G E F RM G+
Sbjct: 440 ALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFFQRM-HSMGMDPN 498
Query: 443 TEHYIYMVKLLGLAGNL---EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
T + G NL +E + ++ + V AL+S +Y D E+
Sbjct: 499 TTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALIS---MYSGCDSLEVACS 555
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
E R + + A+ GR + + L
Sbjct: 556 VFSELSTRDVVVWNSIISACAQSGRSVNALDL 587
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 164/352 (46%), Gaps = 37/352 (10%)
Query: 83 HR---FNDAKSLFKNLLRTQLKPDNFT--YACITRACSENSDLPGLRFVHGGAIVSGLGR 137
HR N+A L ++ T PD YA I + C + +L VH +V+G+
Sbjct: 65 HRNGVLNNAAMLLSSMDLTN--PDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDV 122
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S L+ Y + +++A ++FD +S+ ++ +++ + G ++++++LF M+
Sbjct: 123 CEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMV 182
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G PD + + E VG+ ++ + L F+ V ++ M+ +C M+
Sbjct: 183 NEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRMD 242
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A F + D+ W+ +++GY+ +G++ KAL + + G K D V
Sbjct: 243 IARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQV---------- 292
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
W A+I GY FE + S ++M G++ F+ N++++ +
Sbjct: 293 ----TW-NAIISGYAQSGQFEEA---SKYFLEMG--------GLKDFKP----NVVSWTA 332
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+I G +G+ ++A FR ++ +G+ P+ T ++ + AC + L+ GREI
Sbjct: 333 LIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREI 384
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 106/213 (49%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L +G +H + + D +++ S L+ +Y + C+ A +F+ + ++ +W+A++
Sbjct: 105 LRLGFQVHAQLVVNGVDVCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEM 164
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y GDY + + F + +G + D + V A ++ N G ++ Y++ GFE +
Sbjct: 165 YCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGN 224
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V +++DM+ KCG + + + FE + +++ +N ++ G G +A + D+
Sbjct: 225 SCVKGSILDMFIKCGRMDIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKL 284
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G+ PD+ T++A++ G + + F M
Sbjct: 285 SGVKPDQVTWNAIISGYAQSGQFEEASKYFLEM 317
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 8/308 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L KE+H V + + + L+ +Y+ + L A +F + R V +WNSII
Sbjct: 513 RNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGCDSLEVACSVFSELSTRDVVVWNSII 572
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
A A + R +A L + + + ++ + T ACS+ + L + +H I GL
Sbjct: 573 SACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLD 632
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ ++L+ Y + I ++ ++FD + DLV N MIS + GF ++ LF
Sbjct: 633 TCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXF 692
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYARCN 254
+G P+ T L+S L+ G +K+ + V + +V + +R
Sbjct: 693 RTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKM-MKTEYAMDPAVEQYACMVDLLSRAG 751
Query: 255 CMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALY---YFRKLNMQGKKADPVLIA 310
N + F P+ W +L+ + A Y Y +L Q + VL+A
Sbjct: 752 QFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ-SSGNYVLMA 810
Query: 311 SVLAAAAK 318
++ +AA +
Sbjct: 811 NIYSAAGR 818
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 94/213 (44%), Gaps = 13/213 (6%)
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS------Q 283
F L S+F +S L ++ R C+ ++ + L ITG+S +
Sbjct: 8 FALNSNFAIQPKGTSPLQTLPTRNCCIVASTNTKTQNLRK-LTNARQRITGFSGGGSVHR 66
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G A +++ + AS+L K N+ G +H ++ +G ++ +
Sbjct: 67 NGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFL 126
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI---LGLGLHGFTYQAFEFFRDIIE 400
S L+++Y + G + ++F+ MSERN+ ++ +++ GLG + T + F ++
Sbjct: 127 GSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYL---MVN 183
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+G+ PD F + AC G++++ M
Sbjct: 184 EGVRPDHFVFPKVFKACSELKNYRVGKDVYDYM 216
>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cucumis sativus]
Length = 816
Score = 269 bits (688), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 282/544 (51%), Gaps = 2/544 (0%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H+ + ++ +L +++H LV K D + A + Y+ + A LFD
Sbjct: 142 HYTFPPVIRACGNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNMM 201
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
R + WN++I + L + +A +F + + D+ T + + C + D+
Sbjct: 202 IRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVL 261
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H AI GL D +AL+ Y+K + A +F+ + D+V NS+++ F
Sbjct: 262 IHVYAIKLGLEFDLFVCNALINMYAKFGELRSAETIFNQMKVRDIVSWNSLLAAFEQNKK 321
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSS 244
+L +++ M +G PD TLV L S E + IHGF + + +D + +
Sbjct: 322 PVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGN 381
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM-QGKK 303
++ MYA+ ++SA VF L D+++W++LITGYSQ G +A+ + + G
Sbjct: 382 AIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAV 441
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ S+L A ++ + G HG +I++ + VS+ LVDMY KCG L + +
Sbjct: 442 PNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSL 501
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F + ++ +++N++I GLHG+ +A + F+++ +G+ PD TF +LL AC H GLV
Sbjct: 502 FYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLV 561
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
++G+ F M E YGI+ +HY MV L G AG+LE+A++F+ ++P D +V GALL
Sbjct: 562 DEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLG 621
Query: 484 CCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
C I+ N +L V+ L + + Y V+LSN YA+ G W+ V ++R D GL+K
Sbjct: 622 ACRIHENVELVRTVSDHLLKVESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKT 681
Query: 544 AGVS 547
G S
Sbjct: 682 PGWS 685
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 130/474 (27%), Positives = 239/474 (50%), Gaps = 16/474 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+LHAL+ + + F + KL+ YA +P AR+ FD+ + V+ WNS+I AYA
Sbjct: 60 KQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTKDVYTWNSMISAYARI 119
Query: 83 HRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
F+ A F L T L+ D++T+ + RAC +L R VH + G D
Sbjct: 120 GHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYI 176
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++ + YS+ + A +FD + D+ N+MISGF G ++L++FD M
Sbjct: 177 AASFIHFYSRFGFVSLACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSV 236
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ D T+ L+ + + G IH + +K + +V + L++MYA+ + SA
Sbjct: 237 SMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKFGELRSAET 296
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+FN + D+V+W++L+ + Q AL + K++ G D + + S+ + AA+ N
Sbjct: 297 IFNQMKVRDIVSWNSLLAAFEQNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGN 356
Query: 322 VWPGAVIHGYVIQHGFEL-SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
IHG+V + + L + + +A++DMY+K G++ +VFE + +++I++NS+I
Sbjct: 357 FLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEGLPVKDVISWNSLIT 416
Query: 381 GLGLHGFTYQAFEFFRDI-IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE--- 436
G +G +A + + + G P++ T+ ++L A G + G + ++ +
Sbjct: 417 GYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLY 476
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYG 489
+ I T +V + G G L +A S + +P +VS A++SC ++G
Sbjct: 477 FDIFVST----CLVDMYGKCGKLADALSLFYEVPH--QSSVSWNAIISCHGLHG 524
>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
Length = 694
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/506 (31%), Positives = 258/506 (50%), Gaps = 4/506 (0%)
Query: 49 ALNNVLPSARILFD--KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR--TQLKPDN 104
A +LP A LF P S +N ++RA+ A DA LF +L + D
Sbjct: 61 ASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQ 120
Query: 105 FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG 164
T AC ++CS L R V A+ GL D S+L+ Y+ + A VFD
Sbjct: 121 HTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDA 180
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ +V+ N++++ + G W + +++F ML +G DE TLV +++ +G
Sbjct: 181 AEESGVVMWNAIVAAYLKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLG 240
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ + G + + + L+ MYA+C + A +F+ + D+V WSA+I+GY+Q
Sbjct: 241 KWVAGHVDEEGLARNPKLVTALMDMYAKCGEIGKARRLFDGMQSRDVVAWSAMISGYTQA 300
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
+AL F ++ + + + V + SVL+A A + G +H YV + L+ ++
Sbjct: 301 DQCREALGLFSEMQLARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILG 360
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+ALVD Y+KCG + ++ FE+M +N T+ ++I G+ +G +A E F + E G+
Sbjct: 361 TALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIKGMATNGRGREALELFSSMREAGIE 420
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
P + TF +L AC H LV +GR F M +YGI+ + EHY MV LLG AG ++EAY
Sbjct: 421 PTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIKPRVEHYGCMVDLLGRAGLVDEAYQ 480
Query: 465 FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGR 524
FI ++P + + ALLS C ++ N + E Q+ +P V+LSN YA G+
Sbjct: 481 FIRTMPIEPNAVIWRALLSSCAVHRNVGIGEEALKQIISLNPSHSGDYVLLSNIYASAGQ 540
Query: 525 WDDVMKLRDDIVDNGLRKEAGVSWVS 550
W D +R ++ D G+ K G S +
Sbjct: 541 WKDAAMVRKEMKDRGIEKTPGCSLIE 566
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 2/166 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K +H+ V + L T LV YA + A F+ P ++ + W ++I+
Sbjct: 337 ALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 396
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
A R +A LF ++ ++P + T+ + ACS + + G R A G+
Sbjct: 397 GMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARDYGIK 456
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFA 181
+V + L+DEA + + +P+ V+ +++S A
Sbjct: 457 PRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCA 502
>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Cucumis sativus]
Length = 990
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 275/528 (52%), Gaps = 2/528 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H + K L+ + L+ +Y+ L A ILF K +SV WNS+I AY+
Sbjct: 335 IHGMAVKLGLVHELMVCNALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGF 394
Query: 85 FNDAKSLFKNLLRTQ--LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ L + + + ++ + T + AC E S+L LR +HG ++ + +
Sbjct: 395 VFETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELIN 454
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A + AY+K + A VF G++ + N++I G A G K+L + M RLG
Sbjct: 455 NAFIAAYAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGIL 514
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD++++V L+ LL G+ IHGF L++ + +V+ L+S+Y C+
Sbjct: 515 PDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTY 574
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + + V W+A+++GYSQ +AL FR++ G + D + IAS+L A ++ + +
Sbjct: 575 FERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSAL 634
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H + +++ V+ +L+DMY+K G+LG ++F ++ + + ++N +I G
Sbjct: 635 GLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGF 694
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG +A E F D+ PD TF +L ACCH GLV++G +M Y ++ +
Sbjct: 695 GVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPE 754
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY ++ +LG AG L EA +FI +P+ D + +LLS Y + ++ E A +L
Sbjct: 755 LEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLL 814
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ K ++LSN YA G+WD V +R + D L+K+ G SW+
Sbjct: 815 ALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIE 862
Score = 215 bits (548), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 236/428 (55%), Gaps = 6/428 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFY-ATKLVRLYALNNVLPSARILFDKTPQ 66
++L+ ++++ ++L ++ +S F T+L+ +Y++ +R++FD+
Sbjct: 112 MLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLN 171
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRF 125
+++F WN+++ Y +++A F L+ T+ +PDNFT+ C+ +AC+ D+ +
Sbjct: 172 KNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKS 231
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG A+ GL D +A++ Y K +DEA+++FD + + +L+ NS+I GF+ GF
Sbjct: 232 VHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGF 291
Query: 186 WDKSLQLFDWMLRLGK--TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
W ++ + F +L G PD T+V L+ + VG IHG +K V
Sbjct: 292 WLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVC 351
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK- 302
+ L+ MY++C C++ A +F + + +V+W+++I YS++G + RK+ M+ +
Sbjct: 352 NALIDMYSKCGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEEL 411
Query: 303 -KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ + V I ++L A + + + +HGY ++H F+ ++++A + Y+KCG L
Sbjct: 412 MEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAE 471
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
VF M+ +++ ++N+VI G +G +A +F+ ++ G+ PD+ + +LL AC G
Sbjct: 472 HVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLG 531
Query: 422 LVNDGREI 429
L+ G+EI
Sbjct: 532 LLQYGKEI 539
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L KE+H K SL+ D F A L+ +YA + L ++ +F++ + V WN +I
Sbjct: 633 ALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMIT 692
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ + + N A LF+++ R+ +PD FT+ + +AC H G + GL
Sbjct: 693 GFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQAC-----------CHAGLVSEGL 739
>gi|297597850|ref|NP_001044616.2| Os01g0815900 [Oryza sativa Japonica Group]
gi|56785064|dbj|BAD82703.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|255673814|dbj|BAF06530.2| Os01g0815900 [Oryza sativa Japonica Group]
Length = 566
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 282/568 (49%), Gaps = 36/568 (6%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIR 77
+ K LHA + L + +K++R YA L L A +FD+ + FLWN +IR
Sbjct: 1 MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 60
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A + DA + +K + PDN T+ I +AC+ + L +H GL
Sbjct: 61 GLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLS 120
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D S++L+ Y+ + A VFD + D+V NS+I G++ C + L LF M
Sbjct: 121 DIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQ 180
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVG----QGIHGFCLKSSFDSY------DY------ 241
G D+ T++ ++S S+ + I +C++ D Y DY
Sbjct: 181 NEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIE--VDVYLGNTLVDYFGRRGQ 238
Query: 242 -----------------VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +++ YA+ + SA +F+ + DL++WS++I+GYSQ
Sbjct: 239 LQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQA 298
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
+ AL FR++ K D ++IASV+++ A + G +H YV ++ + ++
Sbjct: 299 NHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIME 358
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
++L+DMY KCG +QVF+ M E++ +++NS+I+GL +GF ++ F+ ++ +G
Sbjct: 359 NSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFR 418
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
P+ TF +L AC + LV +G + F M Y ++ + +HY +V LLG AG LE+A
Sbjct: 419 PNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALR 478
Query: 465 FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGR 524
FI +P DP V LL C+ +G+ +AEIV +L E +P +LSN YA R
Sbjct: 479 FITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHR 538
Query: 525 WDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
W + M +R + D +RK G S V +
Sbjct: 539 WSEAMNVRQCMADTDVRKSPGCSAVEAA 566
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 200/464 (43%), Gaps = 65/464 (14%)
Query: 4 NLHF-LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
NL F +L+ +L+ +++H + K LL D F + L+ LYA L AR +FD
Sbjct: 87 NLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFD 146
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP- 121
+ + V WNS+I Y+ +RF D +LFK + +K D T + AC+ D
Sbjct: 147 EMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSM 206
Query: 122 ---GLRFVH----------GGAIVSGLG-----------------RDSITSSALVTAYSK 151
+R++ G +V G R+ +T +A++ AY+K
Sbjct: 207 ADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAK 266
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
I A K+FD + DL+ +SMISG++ + +L++F M R PD + +
Sbjct: 267 GQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASV 326
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+S L +G+ +H + +++ + + + L+ MY +C A VF + D
Sbjct: 327 VSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDT 386
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
++W+++I G + G ++L F+ + +G + + V VL A A + V G
Sbjct: 387 LSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG------ 440
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+ H FE ++ +YS E + Y V+ LG G +A
Sbjct: 441 -LDH-FE-------SMKRLYS---------------LEPQMKHYGCVVDLLGRAGQLEKA 476
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
F I E ++PD + LL +C G V + ++ E
Sbjct: 477 LRF---ITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNE 517
>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
Length = 695
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 154/515 (29%), Positives = 259/515 (50%), Gaps = 35/515 (6%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD F ++ LYA + ++ R++FD P R +N++I +A R A +F +
Sbjct: 87 RDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRM 146
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ LKP +T+ + AC++ DL + +HG I+ LG + +AL Y++ I
Sbjct: 147 QKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARCGEI 206
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+A ++FD + ++V N MISG+ +K + LF M PD+ T
Sbjct: 207 DQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVT-------- 258
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+S ++ Y + ++ A VF + D V W+
Sbjct: 259 ---------------------------ASSVLGAYIQAGYIDEARKVFGEIREKDEVCWT 291
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I G +Q G AL F ++ ++ + D I+SV+++ AK A+++ G V+HG
Sbjct: 292 IMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLM 351
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G ++VSSALVDMY KCG +F TM RN++++NS+I G L+G +A +
Sbjct: 352 GVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLY 411
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
+++E+ L PD TF +L AC H GLV +G+E F M++++G++ +HY MV L G
Sbjct: 412 ENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGR 471
Query: 456 AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
+G++++A I S+ + + + +LS C + G+ E+ A L E +P +ML
Sbjct: 472 SGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIML 531
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
SN YA GRW DV +R + ++K + SW+
Sbjct: 532 SNMYAARGRWKDVASIRSLMKSKHVKKFSAYSWIE 566
>gi|125529041|gb|EAY77155.1| hypothetical protein OsI_05121 [Oryza sativa Indica Group]
Length = 916
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 274/535 (51%), Gaps = 6/535 (1%)
Query: 19 LSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L KE+H ++ K + + L+ LY N +ARILF P R + WN++I
Sbjct: 383 LPEGKEVHGYIIKKGHIYEECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMIS 442
Query: 78 AYALAHRF-NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ +AK++FK LL L T + +C DL + VH + G
Sbjct: 443 GYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFILKYGFL 502
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+++L+ Y A + + ++ D++ N+ I G G + +L+ F +
Sbjct: 503 TGVSAANSLIHMYICCGDSLAAFSLLESITPMSDIISWNTAIVGCVQNGLYGDALEAFQF 562
Query: 196 M-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M L PD TLV ++S L S+G+ IH LK + V + L++MY R
Sbjct: 563 MHSTLTLNPDSITLVSVLSVCGNLKLQSLGKSIHCMALKRLIEFNLRVKNALLTMYFRFG 622
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
SA +F+SL +L +W+ +I+G++Q + +AL +++K M+ + + + I ++
Sbjct: 623 DTESAELIFSSLVGRNLCSWNCMISGFAQNNEGLRALQFYKK--MEYFEPNEISIVGIIC 680
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + ++ G IHG+V++ G + +V +S++LVDMYSKCG L + I+VFE+ +E++I
Sbjct: 681 ACTQLGDLRQGKNIHGHVVRFGLQTNVFISASLVDMYSKCGRLDISIRVFESSAEKSIAC 740
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS+I G HG ++ E F + G+ STF ALL AC H GL ++G + + M
Sbjct: 741 WNSMISAFGFHGLGLKSIEIFWKMNNSGVKATRSTFIALLSACSHSGLTDEGLKYYHLMI 800
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
E +GI EH++ +V +LG AG L+EA+ F+ SLP V GALLS C +
Sbjct: 801 EHFGIIPTPEHHVCVVDMLGRAGRLQEAHKFVESLPSKQAHGVWGALLSACSKKSELKMC 860
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E VA L +P Y V +SN YA W +++RD + D GL K G S +
Sbjct: 861 ESVAKHLLCLEPENSGYYVTMSNLYAYQDMWSGAVQVRDILQDKGLMKPRGRSII 915
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 207/423 (48%), Gaps = 15/423 (3%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL H + K L D L+ +YA S+ ++F + P R WNS++
Sbjct: 178 RSLEHGIAFHGMALKRRLDTDLSLWNTLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMV 237
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL-RFVHGGAIVSGL 135
+ FK ++R+ + D + +C+ ACS DL VH I L
Sbjct: 238 SGSLFNGLAEISAYYFKEMVRSSFQADEVSLSCVLSACSHLKDLFSFGESVHSSVI--KL 295
Query: 136 GRDSITSS---ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G + TSS +L+T Y +L + A +VF S+ +LV N+MI G ++++ +
Sbjct: 296 GYEDTTSSVENSLITFYYELGFPEAAEEVFLSTSNKNLVTWNAMIKGLVENDRVNEAMCM 355
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYA 251
F M R PD TLV +IS + LL G+ +HG+ +K + V + L+ +Y
Sbjct: 356 FQEM-RSKNQPDVATLVTIISACGDRGLLPEGKEVHGYIIKKGHIYEECSVGNSLLDLYM 414
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYYFRKLNMQGKKADPVLIA 310
+CN ++A +F ++ DL++W+ +I+GYS+ G +A F+ L +G +
Sbjct: 415 KCNDPSTARILFRTMPMRDLISWNTMISGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVV 474
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE- 369
+V+ + ++ G +H +++++GF V +++L+ MY CG + E+++
Sbjct: 475 AVIPSCFCPQDLNFGKSVHSFILKYGFLTGVSAANSLIHMYICCGDSLAAFSLLESITPM 534
Query: 370 RNIITYNSVILGL---GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+II++N+ I+G GL+G +AF+F + LNPD T ++L C + L + G
Sbjct: 535 SDIISWNTAIVGCVQNGLYGDALEAFQFMHSTLT--LNPDSITLVSVLSVCGNLKLQSLG 592
Query: 427 REI 429
+ I
Sbjct: 593 KSI 595
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/426 (27%), Positives = 207/426 (48%), Gaps = 53/426 (12%)
Query: 19 LSRTKELHALVAKASLLR------------DPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L RT L A V A+ +R DPF L + ++ A L D+TP+
Sbjct: 2 LRRTPRLLAAVNPATAVRSTAALVQIASPLDPFLLHHLTARF--HHAPADAHHLLDETPR 59
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R+ +SI+RA AC A E +D G+ +
Sbjct: 60 RA----SSIVRALG---------------------------AC-RGASREEAD--GVAAL 85
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGF 185
H A+ S D ++++TAYS++ + A++VFD + PDL+L N+ IS +C +
Sbjct: 86 HCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCRY 145
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D ++ LF WM+ + D ++V ++SG L G HG LK D+ + +
Sbjct: 146 GD-AVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAFHGMALKRRLDTDLSLWNT 204
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MYA+C S+ VF + + D +W+++++G G + YYF+++ +AD
Sbjct: 205 LMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQAD 264
Query: 306 PVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFE-LSVMVSSALVDMYSKCGYLGLGIQV 363
V ++ VL+A + +++ G +H VI+ G+E + V ++L+ Y + G+ +V
Sbjct: 265 EVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEEV 324
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F + S +N++T+N++I GL + +A F+++ K PD +T ++ AC GL+
Sbjct: 325 FLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSKN-QPDVATLVTIISACGDRGLL 383
Query: 424 NDGREI 429
+G+E+
Sbjct: 384 PEGKEV 389
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 122/492 (24%), Positives = 226/492 (45%), Gaps = 15/492 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K++ + DP T ++ Y+ + SA +FD+ + LWN+ I A L R
Sbjct: 85 LHCAALKSAAVLDPPVRTSVITAYSRVRDVCSALQVFDEAAAPDLILWNAAISALTLNCR 144
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGRDSITSS 143
+ DA LF+ ++ D+ + + S L G+ F HG A+ L D +
Sbjct: 145 YGDAVVLFRWMVDVLGVFDSTSMVIMLSGASRARSLEHGIAF-HGMALKRRLDTDLSLWN 203
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ Y+K + VF + D NSM+SG G + S F M+R
Sbjct: 204 TLMDMYAKCGDFYSSEVVFQRMPYRDTTSWNSMVSGSLFNGLAEISAYYFKEMVRSSFQA 263
Query: 204 DEYTLVGLISGLWE-PSLLSVGQGIHGFCLKSSF-DSYDYVSSVLVSMYARCNCMNSAYH 261
DE +L ++S L S G+ +H +K + D+ V + L++ Y +A
Sbjct: 264 DEVSLSCVLSACSHLKDLFSFGESVHSSVIKLGYEDTTSSVENSLITFYYELGFPEAAEE 323
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF S + +LVTW+A+I G + +A+ F+++ + + D + ++++A
Sbjct: 324 VFLSTSNKNLVTWNAMIKGLVENDRVNEAMCMFQEMRSK-NQPDVATLVTIISACGDRGL 382
Query: 322 VWPGAVIHGYVIQHG--FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G +HGY+I+ G +E V ++L+D+Y KC +F TM R++I++N++I
Sbjct: 383 LPEGKEVHGYIIKKGHIYE-ECSVGNSLLDLYMKCNDPSTARILFRTMPMRDLISWNTMI 441
Query: 380 LGLGLH-GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
G + +A F+ ++ +GL+ ST A++ +C +N G+ + + + +YG
Sbjct: 442 SGYSRNDSLGEEAKAMFKGLLSEGLSCTLSTVVAVIPSCFCPQDLNFGKSVHSFIL-KYG 500
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS--GALLSCCH--IYGNSDLA 494
++ + G+ A+S + S+ P+ +S A++ C +YG++ A
Sbjct: 501 FLTGVSAANSLIHMYICCGDSLAAFSLLESI-TPMSDIISWNTAIVGCVQNGLYGDALEA 559
Query: 495 EIVAHQLFENDP 506
H +P
Sbjct: 560 FQFMHSTLTLNP 571
>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/495 (32%), Positives = 267/495 (53%), Gaps = 8/495 (1%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENS 118
+F T + V WNS++RA+ ++ A + +L R++ PD FT+ + + C+
Sbjct: 34 VFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
+ + +HG + L D + L+ Y+ + A +F+ + + V+ SMIS
Sbjct: 94 EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
G+ +++L L+ M G +PDE T+ L+S E L VG +H +
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKI 213
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL- 297
+ S LV+MYA+C + +A VF+ L D+ WSALI GY + +AL FR++
Sbjct: 214 CAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVA 273
Query: 298 ---NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
NM + + V I +V++A A+ ++ G +H Y+ + SV ++++L+DM+SKC
Sbjct: 274 GGSNM---RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G + ++F++MS +++I++NS++ G LHG +A FR + L PDE TF +L
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVL 390
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC H GLV +G+++F + YG++ K+EHY MV LL AG L EA FI +P D
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
A+ G++L C +Y N +L E A L + +P ++LSN YA+ W++V K+R+
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRKMWNEVKKVREL 510
Query: 535 IVDNGLRKEAGVSWV 549
+ + G++K G S V
Sbjct: 511 MNEKGIQKTPGCSSV 525
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 168/348 (48%), Gaps = 4/348 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH V K L D + T L+ +YA L SAR LF++ R+ +W S+I Y
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKN 158
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
H N+A L+K + PD T A + AC+E DL +H + ++
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLG 218
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y+K + A +VFD +SD D+ +++I G+ ++LQLF +
Sbjct: 219 SALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 203 -PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+E T++ +IS + L G+ +H + ++ +++ L+ M+++C +++A
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+S+ + DL++W++++ G++ G +AL FR + + D + VL A + +
Sbjct: 339 IFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGL 398
Query: 322 VWPGAVIHGYVIQ--HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
V G + Y I+ +G L +VD+ + G L + M
Sbjct: 399 VQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM 445
>gi|242076494|ref|XP_002448183.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
gi|241939366|gb|EES12511.1| hypothetical protein SORBIDRAFT_06g022570 [Sorghum bicolor]
Length = 549
Score = 269 bits (687), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 261/509 (51%), Gaps = 25/509 (4%)
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
TP W IR A F DA SLF + R P + A + A + L GL
Sbjct: 9 TPWPPPLSWAHQIRMAAAQGHFRDAISLFLRM-RACAAPRSSVPASLPAALKSCAAL-GL 66
Query: 124 RFV----HGGAIVSGLGRDSITSSALVTAYSKL-------------------SLIDEAIK 160
+ H AI SG D T++AL+ Y KL + ++ K
Sbjct: 67 SALGASLHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRK 126
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VFD + + D+V N+++ G A G ++L L M R G PD +TL ++ E +
Sbjct: 127 VFDEMIERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECAD 186
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ G +HGF +++ FD+ +V S L+ MYA C + + VF++L D + W++++ G
Sbjct: 187 VKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAG 246
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
+Q G +AL FR++ G + PV +S++ A++ G +H YVI+ GFE +
Sbjct: 247 CAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDN 306
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V +SS+L+DMY KCG + + +F+ M +++++ ++I+G LHG +A F +
Sbjct: 307 VFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMEL 366
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
P+ TF A+L AC H GLV+ G + F M++ YGI EH + +LG AG L+
Sbjct: 367 GNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELD 426
Query: 461 EAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
EAY+FI + +V LL C ++ N+ LAE VA ++ E +PR V+LSN Y+
Sbjct: 427 EAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYS 486
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
GRW++ LR + G++K+ SW+
Sbjct: 487 ASGRWNEAAHLRKSMRKKGMKKDPACSWI 515
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/397 (26%), Positives = 191/397 (48%), Gaps = 21/397 (5%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYAL-------------------NNVLPSARILFDKTP 65
LHAL ++ D F A L+ LY + L S R +FD+
Sbjct: 73 LHALAIRSGAFADRFTANALLNLYCKLPCSYLHSTGVTSVGGTGSSTALESVRKVFDEMI 132
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R V WN+++ A R ++A L + + R +PD+FT + + +E +D+
Sbjct: 133 ERDVVSWNTLVLGCAEEGRHHEALVLVRKMWREGFRPDSFTLSSVLPIFAECADVKRGSE 192
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG A+ +G D S+L+ Y+ + D ++KVFD + D +L NS+++G A G
Sbjct: 193 VHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDPILWNSVLAGCAQNGS 252
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++L +F ML+ G P T LI + L G+ +H + ++ F+ ++SS
Sbjct: 253 VEEALGIFRRMLQTGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVIRGGFEDNVFISSS 312
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MY +C ++ A+H+F+ + PD+V+W+A+I GY+ G +AL F ++ + K +
Sbjct: 313 LIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPN 372
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQH-GFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ +VL A + + V G + H G ++ +AL D+ + G L
Sbjct: 373 HITFLAVLTACSHAGLVDKGWKYFKSMSDHYGIVPTLEHCAALADILGRAGELDEAYNFI 432
Query: 365 ETMSERNIIT-YNSVILGLGLHGFTYQAFEFFRDIIE 400
M + + +++++ +H T A E + I+E
Sbjct: 433 SKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 469
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 134/341 (39%), Gaps = 50/341 (14%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + R E+H + D F + L+ +YA + +FD P R
Sbjct: 177 VLPIFAECADVKRGSEVHGFAVRNGFDNDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 236
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF--- 125
LWNS++ A +A +F+ +L+T ++P T++ + C +L LRF
Sbjct: 237 PILWNSVLAGCAQNGSVEEALGIFRRMLQTGVRPVPVTFSSLIPVC---GNLASLRFGKQ 293
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I G + SS+L+ Y K I A +FD + PD+V +MI G+A G
Sbjct: 294 LHAYVIRGGFEDNVFISSSLIDMYCKCGEISIAHHIFDRMCSPDVVSWTAMIMGYALHGP 353
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++L LF+ M P+ T + +++ L+ G KS D Y V ++
Sbjct: 354 AREALVLFERMELGNAKPNHITFLAVLTACSHAGLVDKGWKY----FKSMSDHYGIVPTL 409
Query: 246 -----LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITG------------------- 280
L + R ++ AY+ + + P WS L+
Sbjct: 410 EHCAALADILGRAGELDEAYNFISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 469
Query: 281 ---------------YSQQGDYGKALYYFRKLNMQGKKADP 306
YS G + +A + + + +G K DP
Sbjct: 470 LEPRSIGSHVVLSNMYSASGRWNEAAHLRKSMRKKGMKKDP 510
>gi|297737154|emb|CBI26355.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 279/548 (50%), Gaps = 45/548 (8%)
Query: 9 VLELSKSHQSLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+L + + ++L K +HA L+ ++S+ F KL+RLY+ A +FD+ Q
Sbjct: 5 ILHIIHNCKTLKSLKSIHARLLIESSVASSEFVINKLLRLYSRFGATDYAHKVFDEITQP 64
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ +LW S+I Y ++++A SLF + R + NFT + + +A + + G + V+
Sbjct: 65 NAYLWTSLIHGYVENRQYDEAFSLFIQMRREPISVLNFTISSVLKALARLTRFKGGQAVY 124
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G A +D ++ + +++ Y +D A K FD + + ++V SMI G+ G
Sbjct: 125 GFAFDEMCEKDIVSWNMMISGYGNNDRVDIARKFFDRMPERNVVSWTSMICGYVKAGDMA 184
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++ LFD M D + ++SG D DY +
Sbjct: 185 EAQVLFDSM----PVKDLASWNVMVSGY--------------------MDIGDYTNG--- 217
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
ARC +F+ + +LVTWS +I GY++ G KAL F + Q K D
Sbjct: 218 ---ARC--------LFDQMPMKNLVTWSTMIGGYARNGQPLKALELFERFKEQDIKPDET 266
Query: 308 LIASVLAAAAKSANVWPG-AVIHGYVIQHGFEL--SVMVSSALVDMYSKCGYLGLGIQVF 364
I +++A ++ + ++IH YV G L + V ++L+DMY+KCG + +Q+F
Sbjct: 267 FILGIISACSQLGIIDAAESIIHNYV---GPSLLSDLRVFTSLIDMYAKCGSIEKALQMF 323
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
E ++++ Y+++I L HG A F + + PD TF +L AC HGGLV+
Sbjct: 324 EMAHPKDLLCYSTMIAALANHGLGRDAIFLFDKMQRANIKPDSVTFLGVLTACNHGGLVD 383
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+GR+ F +MTEE+GIQ +HY +V LLG G LEEAY+ I ++P V GALL+
Sbjct: 384 EGRKYFKQMTEEFGIQPSEKHYACVVDLLGRVGCLEEAYNLIRNMPIAPHSVVWGALLAA 443
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C ++ N LAE+ A +LF+ +P ++LSN YA GRW V K+R I ++ +RK
Sbjct: 444 CRVHCNVQLAEVAAAELFKIEPDNSGNYILLSNIYAAAGRWGSVAKVRAKIREHRVRKNR 503
Query: 545 GVSWVSGS 552
G SW+ S
Sbjct: 504 GSSWIELS 511
>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 741
Score = 269 bits (687), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 163/576 (28%), Positives = 297/576 (51%), Gaps = 36/576 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQ 66
L L + ++L + +HA + K L + +KL+ L+ LP A +F +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQE 96
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
++ +WN++ R +AL+ A L+ ++ L P+++T+ + ++C+++ + +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQI 156
Query: 127 HGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLI 155
HG + G RD ++ +AL+ Y+ I
Sbjct: 157 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYI 216
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+ A K+FD + D+V N+MISG+A G + ++L+LF M++ PDE T+V ++S
Sbjct: 217 ENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSAC 276
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ + +G+ +H + F S + + L+ +Y++C + +A +F L + D+++W+
Sbjct: 277 AQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWN 336
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
LI GY+ Y +AL F+++ G+ + V + S+L A A + G IH Y+ +
Sbjct: 337 TLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 336 --GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
G + + ++L+DMY+KCG + QVF ++ +++ ++N++I G +HG +F+
Sbjct: 397 LKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFD 456
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F + + G+ PD+ TF LL AC H G+++ GR IF MT++Y + K EHY M+ LL
Sbjct: 457 LFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLL 516
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G +G +EA I + D + +LL C ++GN +L E A L + +P V
Sbjct: 517 GHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYV 576
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+LSN YA GRW++V K R + D G++K G S +
Sbjct: 577 LLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSI 612
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 162/346 (46%), Gaps = 33/346 (9%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ ++ +++H V K D + T L+ +Y N L A +FDK+P R
Sbjct: 139 FVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR 198
Query: 68 -------------------------------SVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
V WN++I YA + +A LFK+++
Sbjct: 199 DVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM 258
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+T ++PD T + AC+++ + R VH G G + +AL+ YSK ++
Sbjct: 259 KTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELE 318
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +F+ + D++ N++I G+ H + ++L LF MLR G+TP++ T++ ++
Sbjct: 319 TACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 217 EPSLLSVGQGIHGFCLK--SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ +G+ IH + K + + + L+ MYA+C + +A+ VFNS+ H L +W
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSW 438
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+A+I G++ G + F ++ G + D + +L+A + S
Sbjct: 439 NAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSG 484
>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Vitis vinifera]
Length = 719
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 289/578 (50%), Gaps = 41/578 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + + LS K LH+L K+ + +++ + LY+ L AR F +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 69 VFLWNSIIRAYA------LAHRFND-------------------------AKSLFKNLLR 97
VF +N+II AYA +AH+ D A LF +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
L D FT + + AC ++ L G +H A+ SG ++AL+T Y K +D+
Sbjct: 134 MGLDMDGFTLSAVITACCDDVGLIGQ--LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 158 AIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +VF G+ D V NSMI + K+L LF M+R G D +TL +++
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC-MNSAYHVFNSLFHPDLVTWS 275
LS G HG +K+ F +V S L+ +Y++C M+ VF + PDLV W+
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 276 ALITGYSQQGDY-GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+++GYSQ ++ AL FR++ G + + V++A + ++ G IH ++
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK 371
Query: 335 HGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ + V +AL+ MYSKCG L ++F+ M+E N ++ NS+I G HG ++
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLH 431
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F+ ++E+ + P TF ++L AC H G V +G F M E++ I+ + EHY M+ LL
Sbjct: 432 LFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLL 491
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
G AG L EA + I + P +P G +LL C +GN +LA A+Q+ + +P A
Sbjct: 492 GRAGKLSEAENLIARM--PFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN YA GRW++V +R + D G++K+ G SW+
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 268 bits (686), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 245/467 (52%), Gaps = 36/467 (7%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI--DEAIKVFDGVSDPDLVLCNSMISGF 180
++ VH I +GL + S + L+ +K+ + + VF V+ P+ L +MI G+
Sbjct: 58 IKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGY 117
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH------------ 228
A G +S + M R G P +T L + +G+ +H
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177
Query: 229 --------------GF--CLKSSFDSY---DYVS-SVLVSMYARCNCMNSAYHVFNSLFH 268
GF C + FD D VS + L+ YA+ M SA +F+ L
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPS 237
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D+V W+A++TGY+Q G +AL YF+K+ G + D V +A V++A A+ V I
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297
Query: 329 HGYVIQHGFELS--VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
+ GF S V+V SAL+DMYSKCG +VFE M ERN+ +Y+S+ILG +HG
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
+ A + F D+++ + P++ TF +L AC H GLV GR++F +M + +G+ +HY
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP 506
MV LLG AG LEEA + ++P + V GALL C I+GN D+A+I A++LF+ +P
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP 477
Query: 507 RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
++LSN YA GRW++V KLR I + G +K G SW G +
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKN 524
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 184/406 (45%), Gaps = 38/406 (9%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSAR--ILFDKTPQRSVFLWNSII 76
S+ K++HA + + L + + TKL+R+ +V + ++F + + FLW ++I
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-- 134
R YAL +++ + + + R + P +FT++ + +AC ++ + VH I+ G
Sbjct: 115 RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGF 174
Query: 135 -------------------LG-----------RDSITSSALVTAYSKLSLIDEAIKVFDG 164
LG RD ++ + L+ AY+K ++ A +FD
Sbjct: 175 ASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDD 234
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ D+V +M++G+A G ++L+ F M +G DE TL G+IS + +
Sbjct: 235 LPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHA 294
Query: 225 QGIHGFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
I +S F V S L+ MY++C + AY VF + ++ ++S++I GY+
Sbjct: 295 NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA 354
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSV 341
G AL F + + + V +L+A + + V G + + + G S
Sbjct: 355 MHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSP 414
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHG 386
+ +VD+ + G L + + +TM E N + +++ +HG
Sbjct: 415 DHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 12/259 (4%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD T+L+ YA + SA LFD P + + W +++ YA R +A F+ +
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR--DSITSSALVTAYSKLS 153
++ D T A + AC++ + ++ A SG G + + SAL+ YSK
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
DEA KVF+ + + ++ +SMI G+A G +LQLF ML+ P++ T +G++S
Sbjct: 327 SPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Query: 214 GLWEPSLLSVGQGIHG-----FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-F 267
L+ G+ + F + S D Y + +V + R C+ A + ++
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY----ACMVDLLGRAGCLEEALDLVKTMPM 442
Query: 268 HPDLVTWSALITGYSQQGD 286
P+ W AL+ G+
Sbjct: 443 EPNGGVWGALLGACRIHGN 461
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH--VFNSLFH 268
L+S L + +L S + +H +++ YV + L+ M + + +Y VF + +
Sbjct: 45 LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
P+ W+A+I GY+ QG ++ ++ ++ G +++ A + N+ G +
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 329 HGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL------- 380
H I GF + V ++++D+Y KCG+LG +VF+ MSER+++++ +I+
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 381 ------------------------GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
G +G +A E+F+ + + G+ DE T + ++ A
Sbjct: 225 MESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 417 CCHGGLVNDG---REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
C G V R+I R +G ++ + G+ +EAY
Sbjct: 285 CAQLGAVKHANWIRDIAER--SGFGPSGNVVVGSALIDMYSKCGSPDEAY 332
>gi|15229764|ref|NP_187753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169981|sp|Q9CAY1.1|PP223_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g11460
gi|12322902|gb|AAG51440.1|AC008153_13 hypothetical protein; 50785-52656 [Arabidopsis thaliana]
gi|332641528|gb|AEE75049.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 623
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 152/480 (31%), Positives = 256/480 (53%), Gaps = 2/480 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WN +R A F+++ SL++++LR+ PD F++ I ++C+ S + +H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLC-NSMISGFAHCGFWDKS 189
G + +AL++ Y K L+ +A KVF+ L +C N++ISG+ +
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+F M G + D T++GL+ P L +G+ +HG C+K DS V + ++M
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y +C + + +F+ + L+TW+A+I+GYSQ G L + ++ G DP +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
SVL++ A G + V +GF +V VS+A + MY++CG L VF+ M
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++++++ ++I G+HG F D+I++G+ PD + F +L AC H GL + G E+
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
F M EY ++ EHY +V LLG AG L+EA FI S+P D AV GALL C I+
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N D+AE+ ++ E +P Y V++SN Y++ + + ++R + + RK+ G S+V
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYV 500
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 175/386 (45%), Gaps = 12/386 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVF--LWNSIIRAYA 80
++LH V K +PF T L+ +Y ++ AR +F++ PQ S +N++I Y
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYT 132
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+ DA +F+ + T + D+ T + C+ L R +HG + GL +
Sbjct: 133 ANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVA 192
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++ +T Y K ++ ++FD + L+ N++ISG++ G L+L++ M G
Sbjct: 193 VLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSG 252
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD +TLV ++S +G + + F +VS+ +SMYARC + A
Sbjct: 253 VCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKAR 312
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+ + LV+W+A+I Y G L F + +G + D + VL+A + S
Sbjct: 313 AVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSG 372
Query: 321 NVWPG-----AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIIT 374
G A+ Y ++ G E S LVD+ + G L ++ E+M E +
Sbjct: 373 LTDKGLELFRAMKREYKLEPGPEH----YSCLVDLLGRAGRLDEAMEFIESMPVEPDGAV 428
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIE 400
+ +++ +H A F +IE
Sbjct: 429 WGALLGACKIHKNVDMAELAFAKVIE 454
>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Brachypodium distachyon]
Length = 1206
Score = 268 bits (686), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 283/541 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+L + +L +HA K R+ F + L+ Y++ V+ AR +FD +
Sbjct: 537 VLKLVVAMDTLGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKD 596
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
W +++ Y+ + +F + K + F + RA S + + +H
Sbjct: 597 AVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHA 656
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
++ + + AL+ Y+K I++A F+ V++ D++L + MIS +A C ++
Sbjct: 657 CSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQ 716
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +LF M+R +P+E++L ++ LL +G+ IH +K +S +V + L+
Sbjct: 717 AFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALID 776
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+YA+C+ M S+ +F+SL + V+W+ +I GYS+ G AL FR++ + V
Sbjct: 777 LYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVT 836
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+SVL A A +A++ +H + + F +VS++L+D Y+KCG + ++FET+
Sbjct: 837 YSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK 896
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E +++++N++I G +HG A E F + + + ++ TF ALL C GLV+ G
Sbjct: 897 ECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLS 956
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
+F M ++GI+ EHY +V+LLG AG L +A +FI +P V ALLS C ++
Sbjct: 957 LFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVH 1016
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N +L A ++ E +P+ V+LSN Y+ G D V R + + G+RKE G+SW
Sbjct: 1017 KNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSW 1076
Query: 549 V 549
V
Sbjct: 1077 V 1077
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 196/389 (50%), Gaps = 2/389 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F A L+ +Y SA +FD P+R++ + ++++ +AL F +A +LF+ L
Sbjct: 464 DLFCANVLLNMYTKVGPFGSAHRVFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLR 523
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ + F + + L GL + VH A G R++ SAL+ AYS ++
Sbjct: 524 WEGHEVNQFVLTTVLKLVVAMDTL-GLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVV 582
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A +VFDG+ D V +M+S ++ + +LQ+F M + + L ++
Sbjct: 583 SDARRVFDGIVGKDAVAWTAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAA 642
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S + +G+GIH +K+ +D+ +V L+ MYA+C + A F + + D++ WS
Sbjct: 643 VCLSSVVLGKGIHACSVKTLYDTERHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWS 702
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I+ Y+Q +A F ++ + ++SVL A A + G IH + I+
Sbjct: 703 LMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKI 762
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G E + V +AL+D+Y+KC + +++F ++ + N +++N++I+G GF A F
Sbjct: 763 GHESELFVGNALIDLYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVF 822
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVN 424
R++ + + T+S++L AC +N
Sbjct: 823 REMRAASVPSTQVTYSSVLRACASTASIN 851
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 167/329 (50%), Gaps = 2/329 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGR-DSITSSALVTAYSKLSLIDEAIK 160
D++ YA + + C D G R VHG + SG L R D ++ L+ Y+K+ A +
Sbjct: 427 DSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGSAHR 486
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VFDG+ + ++V +++ G A G ++++ LF + G +++ L ++ +
Sbjct: 487 VFDGLPERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDT 546
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L + G+H K D +V S L+ Y+ C ++ A VF+ + D V W+A+++
Sbjct: 547 LGLAWGVHACACKLGHDRNAFVGSALIDAYSMCGVVSDARRVFDGIVGKDAVAWTAMVSC 606
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
YS+ L F K+ + K +P + SVL AA ++V G IH ++ ++
Sbjct: 607 YSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLYDTE 666
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V AL+DMY+KCG + FE ++ ++I ++ +I QAFE F ++
Sbjct: 667 RHVYGALLDMYAKCGNIEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMR 726
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREI 429
++P+E + S++L AC + L++ G++I
Sbjct: 727 SSVSPNEFSLSSVLQACANMPLLDLGKQI 755
>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
Length = 693
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 273/532 (51%), Gaps = 5/532 (0%)
Query: 24 ELHA-LVAKASLLRDPFYATKLVRLYALN-NVLPSARILFD--KTPQRSVFLWNSIIRAY 79
+LHA L+ L P L+ A + +LP A LF P S +N ++RA
Sbjct: 34 QLHAALIKSGELTGSPKCFHSLLEAAAASPTLLPYAVSLFRLGPRPPLSTPCYNVLMRAL 93
Query: 80 ALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
A DA LF +L + PD T AC ++CS L R + A+ GL D
Sbjct: 94 LHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGIQAYAVKRGLMAD 153
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S+L+ Y+ + A +FD V + +V+ N++I+ + G W + +++F ML
Sbjct: 154 RFVLSSLIHMYASCRDVAAAQLLFDAVEENGVVMWNAIITAYMKNGNWMEVVEMFKGMLE 213
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+G DE TLV +++ +G+ + + + + + L+ MYA+C +
Sbjct: 214 VGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNLMTALIDMYAKCGELGK 273
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+ + D+V WSA+I+GY+Q +AL F ++ + + + V + SVL+A A
Sbjct: 274 ARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEVEPNDVTMVSVLSACAV 333
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +H Y+ + L++++ +ALVD Y+KCG + ++ FE+M +N T+ ++
Sbjct: 334 LGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTAL 393
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G+ +G +A E F + + + P + TF +L AC H LV +GR F MT++YG
Sbjct: 394 IKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYG 453
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + EHY +V LLG AG ++EAY FI ++P + + ALLS C ++ N ++ E
Sbjct: 454 IKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCAVHKNVEIGEEAL 513
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
Q+ +P ++LSN YA G+W + +R ++ D G+ K G S +
Sbjct: 514 KQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEKTPGCSLIE 565
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 73/166 (43%), Gaps = 2/166 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K +H+ + + L T LV YA + A F+ P ++ + W ++I+
Sbjct: 336 ALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWTALIK 395
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
A R +A LF ++ + ++P + T+ + ACS + + G R G+
Sbjct: 396 GMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMTQDYGIK 455
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFA 181
+ +V + LIDEA + + +P+ V+ +++S A
Sbjct: 456 PRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALLSSCA 501
>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
Length = 785
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 163/539 (30%), Positives = 266/539 (49%), Gaps = 8/539 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +HA+ L F + L +YA + AR +FD + WNS++
Sbjct: 119 LRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSG 178
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG--LRFVHGGAIVSGLG 136
Y A + +F + L ++F I + C+ SD+ VHG + +GL
Sbjct: 179 YVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLD 238
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF----AHCG--FWDKSL 190
D +SA++ Y+K + A+ +F V DP++++ N+MI+GF A G ++L
Sbjct: 239 ADLFLASAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREAL 298
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
L+ M G P E+T ++ G+ IHG LK SF DY+ S L+ +Y
Sbjct: 299 SLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLY 358
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+ CM Y F SL D+VTW+++I+G Q + KAL F++ G K D ++
Sbjct: 359 SDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMS 418
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SV+ A A A G I I++GF + ++ + M ++ G + + F+ M R
Sbjct: 419 SVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEMESR 478
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++++++VI HG A F +++ + P+E TF +L AC HGGLV+DG +
Sbjct: 479 DVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGLRYY 538
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
M EYG+ +H +V LLG AG L +A +FI D V +LL+ C I+G+
Sbjct: 539 EIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRIHGD 598
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ ++VA Q+ + +P A V+L N Y + G K RD + + G++KE G+SW+
Sbjct: 599 MERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLSWI 657
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 120/432 (27%), Positives = 215/432 (49%), Gaps = 13/432 (3%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV---LPSARILFDKTPQ 66
L+L +S +L +HA +A+A F L+ Y V L +AR L D+ P+
Sbjct: 6 LDLLRSCTALPHVAAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAAR-LIDEMPR 64
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRF 125
R+ +N +I +Y+ A A F L+ D FTYA ACS DL +
Sbjct: 65 RNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLRTGKA 124
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VH ++ GLG S++L + Y+ + EA +VFD + D V NS++SG+ G
Sbjct: 125 VHAMTVLDGLGNGVFLSNSLASMYASCGEMGEARRVFDAAEEHDDVSWNSLLSGYVRAGA 184
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS--VGQGIHGFCLKSSFDSYDYVS 243
+++L++F M G + + L +I S + + + +HG +K+ D+ +++
Sbjct: 185 REETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLDADLFLA 244
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ-QGDYGK-----ALYYFRKL 297
S ++ MYA+ + +A +F S+ P+++ ++A+I G+ + + GK AL + ++
Sbjct: 245 SAMIDMYAKRGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSREALSLYSEM 304
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+G + +S+L A + G IHG V++H F + SAL+D+YS G +
Sbjct: 305 QSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGCM 364
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G + F ++ +++I+T+ S+I G + +A F++ I GL PD T S+++ AC
Sbjct: 365 EDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMNAC 424
Query: 418 CHGGLVNDGREI 429
+ G +I
Sbjct: 425 ASLAVARTGEQI 436
>gi|125572419|gb|EAZ13934.1| hypothetical protein OsJ_03861 [Oryza sativa Japonica Group]
Length = 1031
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 282/568 (49%), Gaps = 36/568 (6%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIR 77
+ K LHA + L + +K++R YA L L A +FD+ + FLWN +IR
Sbjct: 466 MEAIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIR 525
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A + DA + +K + PDN T+ I +AC+ + L +H GL
Sbjct: 526 GLAQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLS 585
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D S++L+ Y+ + A VFD + D+V NS+I G++ C + L LF M
Sbjct: 586 DIFVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQ 645
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVG----QGIHGFCLKSSFDSY------DY------ 241
G D+ T++ ++S S+ + I +C++ D Y DY
Sbjct: 646 NEGVKADKVTMIKVVSACTRLGDYSMADYMVRYIEDYCIE--VDVYLGNTLVDYFGRRGQ 703
Query: 242 -----------------VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+ +++ YA+ + SA +F+ + DL++WS++I+GYSQ
Sbjct: 704 LQSAEKVFFNMKVRNIVTMNAMIAAYAKGQDIVSARKIFDQIPKKDLISWSSMISGYSQA 763
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
+ AL FR++ K D ++IASV+++ A + G +H YV ++ + ++
Sbjct: 764 NHFSDALEIFRQMQRAKVKPDAIVIASVVSSCAHLGALDLGKWVHEYVRRNNIKADTIME 823
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
++L+DMY KCG +QVF+ M E++ +++NS+I+GL +GF ++ F+ ++ +G
Sbjct: 824 NSLIDMYMKCGSAKEALQVFKEMKEKDTLSWNSIIIGLANNGFEKESLNLFQAMLTEGFR 883
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
P+ TF +L AC + LV +G + F M Y ++ + +HY +V LLG AG LE+A
Sbjct: 884 PNGVTFLGVLIACANAKLVEEGLDHFESMKRLYSLEPQMKHYGCVVDLLGRAGQLEKALR 943
Query: 465 FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGR 524
FI +P DP V LL C+ +G+ +AEIV +L E +P +LSN YA R
Sbjct: 944 FITEMPIDPDPVVWRILLGSCNTHGDVAIAEIVTKKLNELEPSNSGNYTLLSNAYASAHR 1003
Query: 525 WDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
W + M +R + D +RK G S V +
Sbjct: 1004 WSEAMNVRQCMADTDVRKSPGCSAVEAA 1031
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/410 (27%), Positives = 188/410 (45%), Gaps = 43/410 (10%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL---VGLISG 214
A +VFD P ++++ ++H +LQLF R D Y + +G
Sbjct: 47 AHQVFDRRPTP----WHALLKAYSHGPHPQDALQLFR-HARWHAADDTYAFTFALKACAG 101
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
L P +HG ++ F+ YV + LV++Y C C+ + F + + V+W
Sbjct: 102 LGWPRCC---MQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSW 158
Query: 275 SALITGYSQQGD--YGKALY-----------------------------YFRKLNMQGKK 303
+ +ITG++ G+ Y + L+ FR++ +G
Sbjct: 159 NVVITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGIS 218
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ + +V+ A + + G +HGY + G V V ++L+D+Y+K G + ++V
Sbjct: 219 PSEITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRV 278
Query: 364 F-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
F E + RN++++ S+I G +HG + +A E F D+ G+ P+ TF ++L AC HGGL
Sbjct: 279 FDEMLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGL 338
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V G F M EY I +H+ ++ +LG AG L EA I P V+ V LL
Sbjct: 339 VEQGVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLL 398
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
CC YG ++ E ++ + G V+LSN E R+ D +R
Sbjct: 399 GCCSKYGEVEMGERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVR 448
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/465 (25%), Positives = 201/465 (43%), Gaps = 66/465 (14%)
Query: 4 NLHF-LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
NL F +L+ +L+ +++H + K LL D F + L+ LYA L AR +FD
Sbjct: 552 NLTFPFILKACARINALNEGEQMHNHITKLGLLSDIFVSNSLIHLYAACGNLCYARSVFD 611
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP- 121
+ + V WNS+I Y+ +RF D +LFK + +K D T + AC+ D
Sbjct: 612 EMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNEGVKADKVTMIKVVSACTRLGDYSM 671
Query: 122 ---GLRFVH----------GGAIVSGLG-----------------RDSITSSALVTAYSK 151
+R++ G +V G R+ +T +A++ AY+K
Sbjct: 672 ADYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQSAEKVFFNMKVRNIVTMNAMIAAYAK 731
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
I A K+FD + DL+ +SMISG++ + +L++F M R PD + +
Sbjct: 732 GQDIVSARKIFDQIPKKDLISWSSMISGYSQANHFSDALEIFRQMQRAKVKPDAIVIASV 791
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+S L +G+ +H + +++ + + + L+ MY +C A VF + D
Sbjct: 792 VSSCAHLGALDLGKWVHEYVRRNNIKADTIMENSLIDMYMKCGSAKEALQVFKEMKEKDT 851
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
++W+++I G + G ++L F+ + +G + + V VL A A + V G
Sbjct: 852 LSWNSIIIGLANNGFEKESLNLFQAMLTEGFRPNGVTFLGVLIACANAKLVEEG------ 905
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+ H FE ++ +YS E + Y V+ LG G +A
Sbjct: 906 -LDH-FE-------SMKRLYS---------------LEPQMKHYGCVVDLLGRAGQLEKA 941
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
F I E ++PD + LL +C G V EI T+ E
Sbjct: 942 LRF---ITEMPIDPDPVVWRILLGSCNTHGDVAIA-EIVTKKLNE 982
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 111/552 (20%), Positives = 224/552 (40%), Gaps = 63/552 (11%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+ LH K L+ D L+ LYA + ++ S R+ + +R++ W SII +A+
Sbjct: 241 EALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTSIISGFAM 300
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFV-------------- 126
A LF ++ R ++P+ T+ + ACS + G+ F
Sbjct: 301 HGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQGVAFFKSMIYEYNINPDVK 360
Query: 127 HGGAIVSGLGRDSITSSA---------------------LVTAYSKLSLIDEAIKVFDGV 165
H G I+ LGR A + Y ++ + + +K +
Sbjct: 361 HFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEMGERTMKKILAL 420
Query: 166 SDP---DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D V+ ++M++ L+ F + K D+ V + +
Sbjct: 421 EREFGGDFVVLSNMLT----------ELRRFSDAEIVRKLVDQRNSV---KSFFNIVRME 467
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC-MNSAYHVFNSLFHPDLVTWSALITGY 281
+ +H + + S + Y S ++ YA + A+ VF+ + P W+ LI G
Sbjct: 468 AIKRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGL 527
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
+Q A+ +++K G D + +L A A+ + G +H ++ + G +
Sbjct: 528 AQSDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITKLGLLSDI 587
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
VS++L+ +Y+ CG L VF+ M ++++++NS+I G F+ + +
Sbjct: 588 FVSNSLIHLYAACGNLCYARSVFDEMVVKDVVSWNSLICGYSQCNRFKDILALFKLMQNE 647
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
G+ D+ T ++ AC G + + R E+Y I+ +V G G L+
Sbjct: 648 GVKADKVTMIKVVSACTRLGDYSMA-DYMVRYIEDYCIEVDVYLGNTLVDYFGRRGQLQS 706
Query: 462 AYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG--AYKVMLSNTY 519
A +++ V V+ + + G ++ A ++F+ P+K ++ M+S Y
Sbjct: 707 AEKVFFNM--KVRNIVTMNAMIAAYAKGQDIVS---ARKIFDQIPKKDLISWSSMISG-Y 760
Query: 520 AEDGRWDDVMKL 531
++ + D +++
Sbjct: 761 SQANHFSDALEI 772
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 170/411 (41%), Gaps = 36/411 (8%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR+LF++ P R+V W+ +I Y A R +A +LF+ ++ + P T + A S
Sbjct: 174 ARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSEITVLAVVPALSN 233
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNS 175
+ +HG GL D ++L+ Y+K+ I +++VFD + D +LV S
Sbjct: 234 VGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDEMLDRRNLVSWTS 293
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
+ISGFA G K+++LF M R G P+ T + ++ L V QG+ F KS
Sbjct: 294 IISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGL--VEQGVAFF--KSM 349
Query: 236 FDSYDYVSSV-----LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGK 289
Y+ V ++ M R + A + + W L+ S+ G+
Sbjct: 350 IYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIRDFPVEVNATVWRTLLGCCSKYGEVEM 409
Query: 290 ALYYFRKLNMQGKK--ADPVLIASVLAAAAK--SANVWPGAVIHGYVIQHGFELSVMVSS 345
+K+ ++ D V+++++L + A + V ++ F + M +
Sbjct: 410 GERTMKKILALEREFGGDFVVLSNMLTELRRFSDAEIVRKLVDQRNSVKSFFNIVRMEAI 469
Query: 346 ALVDMY------SKCGY---------------LGLGIQVFETMSERNIITYNSVILGLGL 384
+ Y C Y L +VF+ + +N +I GL
Sbjct: 470 KRLHAYYIVSGLYNCHYAMSKVLRSYAILQPDLVFAHKVFDQIEAPTTFLWNILIRGLAQ 529
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
A F++ G+ PD TF +L AC +N+G ++ +T+
Sbjct: 530 SDAPADAIAFYKKAQGGGMVPDNLTFPFILKACARINALNEGEQMHNHITK 580
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 143/342 (41%), Gaps = 38/342 (11%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
A +FD+ P W+++++AY+ DA LF++ R D + + +AC+
Sbjct: 47 AHQVFDRRPTP----WHALLKAYSHGPHPQDALQLFRHA-RWHAADDTYAFTFALKACAG 101
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
+HG + G + +ALV Y + ++ F+ + + V N +
Sbjct: 102 LGWPRCCMQLHGLVVRKGFEFQTYVHTALVNVYILCGCLADSRMAFEEMPVKNAVSWNVV 161
Query: 177 ISGFAHCG------------------FWD-------------KSLQLFDWMLRLGKTPDE 205
I+GFA G W +++ LF M+ G +P E
Sbjct: 162 ITGFAGWGEVEYARLLFERMPCRNVVSWSGMIDGYTRACRPVEAVALFRRMMAEGISPSE 221
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
T++ ++ L + +G+ +HG+C K V + L+ +YA+ + ++ VF+
Sbjct: 222 ITVLAVVPALSNVGKILIGEALHGYCEKEGLVWDVRVGNSLIDLYAKIGSIQNSLRVFDE 281
Query: 266 LF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ +LV+W+++I+G++ G KA+ F + G + + + SVL A + V
Sbjct: 282 MLDRRNLVSWTSIISGFAMHGLSVKAVELFADMRRAGIRPNRITFLSVLHACSHGGLVEQ 341
Query: 325 G-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
G A + ++ V ++DM + G L Q+
Sbjct: 342 GVAFFKSMIYEYNINPDVKHFGCIIDMLGRAGRLREAEQIIR 383
>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
Length = 719
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 180/578 (31%), Positives = 289/578 (50%), Gaps = 41/578 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + + LS K LH+L K+ + +++ + LY+ L AR F +
Sbjct: 14 LLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQDISDPN 73
Query: 69 VFLWNSIIRAYA------LAHRFND-------------------------AKSLFKNLLR 97
VF +N+II AYA +AH+ D A LF +
Sbjct: 74 VFSFNAIIAAYAKESRPLIAHQLFDQIPEPDLVSYNTLISAYADCGETAPALGLFSGMRE 133
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
L D FT + + AC ++ L G +H A+ SG ++AL+T Y K +D+
Sbjct: 134 MGLDMDXFTLSAVITACCDDVGLIGQ--LHSVAVSSGFDSYVSVNNALLTYYGKNGDLDD 191
Query: 158 AIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
A +VF G+ D V NSMI + K+L LF M+R G D +TL +++
Sbjct: 192 AKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALGLFQEMVRRGLNVDMFTLASVLTAFT 251
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC-MNSAYHVFNSLFHPDLVTWS 275
LS G HG +K+ F +V S L+ +Y++C M+ VF + PDLV W+
Sbjct: 252 CLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKCGGGMSDCRKVFEEITEPDLVLWN 311
Query: 276 ALITGYSQQGDY-GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+++GYSQ ++ AL FR++ G + + V++A + ++ G IH ++
Sbjct: 312 TMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVCVISACSNLSSPSQGKQIHSLALK 371
Query: 335 HGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ + V +AL+ MYSKCG L ++F+ M+E N ++ NS+I G HG ++
Sbjct: 372 SDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEHNTVSLNSMIAGYAQHGIEMESLH 431
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F+ ++E+ + P TF ++L AC H G V +G F M E++ I+ + EHY M+ LL
Sbjct: 432 LFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLL 491
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
G AG L EA + I + P +P G +LL C +GN +LA A+Q+ + +P A
Sbjct: 492 GRAGKLSEAENLIARM--PFNPGSIGWASLLGACRTHGNIELAVKAANQVLQLEPSNAAP 549
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
V+LSN YA GRW++V +R + D G++K+ G SW+
Sbjct: 550 YVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWI 587
>gi|15240444|ref|NP_198063.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635756|sp|O04659.2|PP398_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g27110
gi|332006268|gb|AED93651.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 691
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 164/543 (30%), Positives = 277/543 (51%), Gaps = 4/543 (0%)
Query: 14 KSHQSLSRT---KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVF 70
K++ +L R + +H LV K+ + D A+ LV +YA N+ ++ +FD+ P+R V
Sbjct: 115 KAYGALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVA 174
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
WN++I + + A LF + + +P++ + ACS L + +H
Sbjct: 175 SWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ G D +SALV Y K ++ A +VF + LV NSMI G+ G +
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCV 294
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
++ + M+ G P + TL ++ L G+ IHG+ ++S ++ YV+ L+ +Y
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+C N A VF+ +W+ +I+ Y G++ KA+ + ++ G K D V
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFT 414
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SVL A ++ A + G IH + + E ++ SAL+DMYSKCG ++F ++ ++
Sbjct: 415 SVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKK 474
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++++ +I G HG +A F ++ + GL PD T A+L AC H GL+++G + F
Sbjct: 475 DVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFF 534
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA-VSGALLSCCHIYG 489
++M +YGI+ EHY M+ +LG AG L EAY I P+ D A + L S C ++
Sbjct: 535 SQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHL 594
Query: 490 NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L + +A L EN P + ++L N YA WD ++R + + GLRK+ G SW+
Sbjct: 595 EHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWI 654
Query: 550 SGS 552
S
Sbjct: 655 EMS 657
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 241/469 (51%), Gaps = 9/469 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+ E + S +SL R K +H + L RD L+ +Y SAR +F+ R
Sbjct: 9 LLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIR 68
Query: 68 S-VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSE-NSDLPGLR 124
S V++WNS++ Y+ F+D +FK LL + PD+FT+ + +A + G R
Sbjct: 69 SDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLG-R 127
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H + SG D + +S+LV Y+K +L + +++VFD + + D+ N++IS F G
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+K+L+LF M G P+ +L IS L G+ IH C+K F+ +YV+S
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
LV MY +C+C+ A VF + LV W+++I GY +GD + ++ ++G +
Sbjct: 248 ALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRP 307
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ S+L A ++S N+ G IHGYVI+ + V+ +L+D+Y KCG L VF
Sbjct: 308 SQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVF 367
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ ++N +I G ++A E + ++ G+ PD TF+++L AC +
Sbjct: 368 SKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 425 DGREIFTRMTEEYGIQAKTEHYIY--MVKLLGLAGNLEEAYSFIWSLPK 471
G++I ++E + +T+ + ++ + GN +EA+ S+PK
Sbjct: 428 KGKQIHLSISES---RLETDELLLSALLDMYSKCGNEKEAFRIFNSIPK 473
>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
Length = 635
Score = 268 bits (685), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 145/456 (31%), Positives = 245/456 (53%), Gaps = 1/456 (0%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
LL +L P Y I AC+++ +L G R +H S L D ++L+ Y K
Sbjct: 53 LLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGA 112
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+ +A VFDG+ D+V +I+G+A ++L L MLR P +T +
Sbjct: 113 VSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKA 172
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+G+ +H +K + D YV S L+ MYARC M+ A VF+ L + V+W
Sbjct: 173 AGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSW 232
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ALI G++++GD L F ++ G A +SV +A A+ + G +H ++I+
Sbjct: 233 NALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIK 292
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G +L+ V++ ++ MY+K G + +VF+ + +R+++T+N+++ +G +A
Sbjct: 293 SGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAH 352
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F +I + G+ ++ TF ++L AC HGGLV +G++ F M ++Y ++ + +HY+ V LLG
Sbjct: 353 FEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFD-MMKDYNVEPEIDHYVSFVDLLG 411
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG L+EA F++ +P AV GALL C ++ N+ + + A +FE DP V+
Sbjct: 412 RAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPEDTGPPVL 471
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L N YA G+WDD ++R + G++KE SWV
Sbjct: 472 LYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVE 507
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 176/381 (46%), Gaps = 2/381 (0%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H ++ ++S ++L+ + +H+ ++++ L D F L+ +Y + AR +FD P
Sbjct: 66 HSIITACAQS-KNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCKCGAVSDARHVFDGIP 124
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
R V W +I YA +A L ++LR + +P FT+ +A
Sbjct: 125 TRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQ 184
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H A+ L D SAL+ Y++ +D AI+VFD + + V N++I+GFA G
Sbjct: 185 MHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLDSKNEVSWNALIAGFARKGD 244
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ +L F M R G +T + S L L G+ +H +KS +V++
Sbjct: 245 GETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHMIKSGQKLTAFVANT 304
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
++ MYA+ M A VF+ + DLVTW+ ++T ++Q G +A+ +F ++ G + +
Sbjct: 305 ILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLN 364
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG-IQVF 364
+ SVL A + V G + + E + + VD+ + G L I VF
Sbjct: 365 QITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLLGRAGLLKEALIFVF 424
Query: 365 ETMSERNIITYNSVILGLGLH 385
+ E + +++ +H
Sbjct: 425 KMPMEPTAAVWGALLGACRMH 445
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 114/248 (45%), Gaps = 4/248 (1%)
Query: 190 LQLFDWML--RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
L+ D +L L TP Y +I+ + L+ + IH +S ++ + L+
Sbjct: 47 LRELDLLLTGELAPTPRVYH--SIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLI 104
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY +C ++ A HVF+ + D+V+W+ LITGY+Q +AL + +
Sbjct: 105 HMYCKCGAVSDARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGF 164
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
S L AA G +H +++ + V V SAL+DMY++C + + I+VF+ +
Sbjct: 165 TFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWL 224
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+N +++N++I G G F ++ G T+S++ A G + GR
Sbjct: 225 DSKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGR 284
Query: 428 EIFTRMTE 435
+ M +
Sbjct: 285 WVHAHMIK 292
>gi|356557876|ref|XP_003547236.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
mitochondrial-like [Glycine max]
Length = 912
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 179/630 (28%), Positives = 285/630 (45%), Gaps = 101/630 (16%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S S+ ++LH+LV K L + F L+ +YA + A++LFD P + N ++
Sbjct: 284 SSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPTLNPISCNIMVC 343
Query: 78 AYALAHRFNDAKSLF-------------------------------KNLLRTQLKPDNFT 106
YA A + ++A+ LF K++ + P++ T
Sbjct: 344 GYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDMRSDGVVPNDLT 403
Query: 107 YACITRACSENSDLPGLRFVHGGAI---VSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
+ ACS ++ R +H AI V GL + S+ L+ AY S + EA ++FD
Sbjct: 404 LVNVIYACSHFGEILNCRMIHAIAIKLFVEGL---VLVSTNLMRAYCLCSGVGEARRLFD 460
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFD---------W------------------- 195
+ + +LV N M++G+A G D + +LF+ W
Sbjct: 461 RMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDKDVISWGTMIDGYILMNRLHEALVM 520
Query: 196 ---MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
MLR G +E +V L+S + + G +HG +K FD Y+++ + ++ YA
Sbjct: 521 YRAMLRSGLALNEILVVNLVSACGRLNAIGDGWQLHGMVVKKGFDCYNFIQTTIIHFYAA 580
Query: 253 CNCMN-------------------------------SAYHVFNSLFHPDLVTWSALITGY 281
C M+ A +F+ + D+ +WS +I+GY
Sbjct: 581 CGMMDLACLQFEVGAKDHLESWNALVSGFIKNRMVDQARKIFDDMPERDVFSWSTMISGY 640
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
+Q AL F K+ G K + V + SV +A A + G H Y+ L+
Sbjct: 641 AQTDQSRIALELFHKMVASGIKPNEVTMVSVFSAIATLGTLKEGRWAHEYICNESIPLND 700
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSER--NIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ +AL+DMY+KCG + +Q F + ++ ++ +N++I GL HG + F D+
Sbjct: 701 NLRAALIDMYAKCGSINSALQFFNQIRDKTFSVSPWNAIICGLASHGHASMCLDVFSDMQ 760
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
+ P+ TF +L ACCH GLV GR IF M Y ++ +HY MV LLG AG L
Sbjct: 761 RYNIKPNPITFIGVLSACCHAGLVEPGRRIFRIMKSAYNVEPDIKHYGCMVDLLGRAGLL 820
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
EEA I S+P D + G LL+ C +G+ ++ E A L P G KV+LSN Y
Sbjct: 821 EEAEEMIRSMPMKADIVIWGTLLAACRTHGDVNIGERAAESLAGLAPSHGGGKVLLSNIY 880
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A+ GRW+DV +R I + + + G S V
Sbjct: 881 ADAGRWEDVSLVRRAIQNQRMERMPGCSGV 910
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR---------------- 252
+ L+S L S S G+ +H LK S ++ + L++MYA+
Sbjct: 273 LALVSALKYCSSSSQGRQLHSLVLKLGLHSNTFIQNSLINMYAKRGSIKDAQLLFDACPT 332
Query: 253 -----CNCM----------NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
CN M ++A +F+ + V+++ +I G Q + +AL F+ +
Sbjct: 333 LNPISCNIMVCGYAKAGQLDNARKLFDIMPDKGCVSYTTMIMGLVQNECFREALEVFKDM 392
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + + + +V+ A + + +IH I+ E V+VS+ L+ Y C +
Sbjct: 393 RSDGVVPNDLTLVNVIYACSHFGEILNCRMIHAIAIKLFVEGLVLVSTNLMRAYCLCSGV 452
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
G ++F+ M E N++++N ++ G G A E F + +K
Sbjct: 453 GEARRLFDRMPEVNLVSWNVMLNGYAKAGLVDMARELFERVPDK 496
>gi|297843412|ref|XP_002889587.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335429|gb|EFH65846.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 558
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 161/553 (29%), Positives = 289/553 (52%), Gaps = 5/553 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + +L + ++L T+++HA V + + L Y +N L A FD+
Sbjct: 5 NRNRALLSILSQTKTLHHTQQVHAKVIIHGFQDEVVLGSSLTNAYIQSNRLDFATASFDR 64
Query: 64 TP--QRSVFLWNSIIRAYALAHR--FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
P +R+ WN+I+ Y+ + ++D L+ + R D+F +AC
Sbjct: 65 IPCWKRNRHSWNTILSGYSKSKSCYYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGL 124
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L +HG A+ +GL +D + +LV Y++ ++ A KVFD + + VL ++ G
Sbjct: 125 LENGMLIHGLAMKNGLDKDDYVAPSLVEMYAQFGTMESAQKVFDEMPVRNSVLWGVLMKG 184
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-DS 238
+ + +LF M G D TL+ L+ S G+ +HG ++ SF D
Sbjct: 185 YLKYSKDSEVFRLFYLMRDTGLALDALTLICLVKACGNVSAGKEGKCVHGLSIRRSFIDQ 244
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
Y+ + ++ MY +C +++A +F + ++V W+ LI+G+++ +A+ FR++
Sbjct: 245 SGYLEASIIDMYVKCRLLDNARKLFETSVERNVVMWTTLISGFAKCERAVEAIDLFRQML 304
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+ + +A++L + + ++ G +HGY+I++G E+ + ++ +D Y++CG +
Sbjct: 305 GESILPNHCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDTYARCGNIQ 364
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+ +VF+ M +RN+I+++S+I G++G +A + F ++ + L P+ TF +LL AC
Sbjct: 365 MARKVFDMMPKRNVISWSSMINAFGINGLFEEALDCFDNMKSQNLVPNSVTFVSLLSACS 424
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H G V +G + F MT +YG+ + EHY MV LLG AG + EA SFI ++P +
Sbjct: 425 HSGNVKEGWKQFESMTRDYGLVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAW 484
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
GALLS C I+ DLA +A +L +P + + V+LSN YA+ G W+ V +R +
Sbjct: 485 GALLSACRIHKEVDLAGEIAEKLLSMEPDESSVYVLLSNIYADAGMWEMVNCVRHKMGIK 544
Query: 539 GLRKEAGVSWVSG 551
G RK G+S G
Sbjct: 545 GYRKPMGLSATEG 557
>gi|302805550|ref|XP_002984526.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
gi|300147914|gb|EFJ14576.1| hypothetical protein SELMODRAFT_181046 [Selaginella moellendorffii]
Length = 792
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 268/529 (50%), Gaps = 4/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +HA + +++ D F + L+ +YA + SAR F+K + V W S++ AY
Sbjct: 264 KAIHARIVSSNMESD-FVGSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQT 322
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A L+ + + D TY AC+ L + +H G + +
Sbjct: 323 CHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGF-QSLVVH 381
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLC-NSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+AL+T Y+K +D A VF+ V V C +MIS +A G ++L+L+D M+ G
Sbjct: 382 TALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGT 441
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+EYT +++ L G IHG S S V + LV+MYA+C + A
Sbjct: 442 RPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKS 501
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F + DLV+W+A+I Y+Q G +AL ++ + QG D V IAS L+A A S +
Sbjct: 502 AFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGS 561
Query: 322 VWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G IH V++ F S+MV +ALV+MY +CG L +FE M +R+++++ ++
Sbjct: 562 LQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTS 621
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G Q + + +++ G+ P+E TF+++L C H GL+ G E F M E+ +
Sbjct: 622 AYAQQGHADQVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLARGVECFLEMQSEHEVV 681
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EH++ MV LLG +G L +A + + S+P D +L C + ++D A+ A +
Sbjct: 682 PIREHFLCMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARR 741
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ E DP + +LS+ + G + ++++ + + GL+K G S +
Sbjct: 742 VKELDPENTSLYSLLSSIFTAAGLPQEALEVQLSMKEMGLKKPPGQSLI 790
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 159/561 (28%), Positives = 258/561 (45%), Gaps = 52/561 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ-RSVFLWNSII 76
SL+ K +H + + R+ F L+++Y + AR F ++V +N ++
Sbjct: 57 SLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQML 116
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI-VSGL 135
AY +N A L+ + +PD TY + +CS L R +H I +
Sbjct: 117 SAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQI 176
Query: 136 GRDSIT-SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
RD+++ +ALV Y K ++EA KVFDG+ + D V SMIS +A+ GF D++L L+
Sbjct: 177 IRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYANNGFCDEALDLYQ 236
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PD T S L + L G+ IH + S+ +S D+V S L++MYARC
Sbjct: 237 QMDADGIQPDSITFT---SALLACTKLVDGKAIHARIVSSNMES-DFVGSALINMYARCG 292
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++SA F + + +V W++L+T Y Q Y +AL + +++ +G AD V + L
Sbjct: 293 DVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGVHADGVTYVTALG 352
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNII 373
A A + G IH V + GF+ S++V +AL+ MY+KCG L VF + + RN+
Sbjct: 353 ACASLGALKEGKAIHSRVFECGFQ-SLVVHTALLTMYAKCGELDAARAVFNRVRQKRNVY 411
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ ++I G T +A E + ++ +G P+E TFS +L AC G + G +I +
Sbjct: 412 CWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEYTFSNVLAACSSSGDLEAGMKIHGHV 471
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI----------WS--------------- 468
E + + +V + G+LE A S W+
Sbjct: 472 -ENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKDLVSWNAMIGAYAQHGLGREA 530
Query: 469 ------------LPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM-- 514
LP V A S LS C I G+ L + ++ +N + + V
Sbjct: 531 LDLYQTMTSQGVLPDEVTIASS---LSACAISGSLQLGREIHSRVLKNQSFRSSLMVQTA 587
Query: 515 LSNTYAEDGRWDDVMKLRDDI 535
L N Y GR + + +D+
Sbjct: 588 LVNMYGRCGRLETARSMFEDM 608
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 137/539 (25%), Positives = 253/539 (46%), Gaps = 43/539 (7%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKA-SLLRDPF-YATKLVRLYALNNVLPSARILFDK 63
+F+VL + SL +E+HA + +A ++RD LV +Y + AR +FD
Sbjct: 147 YFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDG 206
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
R W S+I +YA ++A L++ + ++PD+ T+ AC++ L
Sbjct: 207 IKNRDAVSWTSMISSYANNGFCDEALDLYQQMDADGIQPDSITFTSALLACTK---LVDG 263
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +H + S + D + SAL+ Y++ + A + F+ + + +V S+++ +
Sbjct: 264 KAIHARIVSSNMESDFV-GSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQT 322
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+ ++L L+ M G D T V + L G+ IH + F S V
Sbjct: 323 CHYREALDLYGRMDHEGVHADGVTYVTALGACASLGALKEGKAIHSRVFECGFQSL-VVH 381
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++MYA+C +++A VFN + ++ W+A+I+ Y+Q G +AL + ++ +G
Sbjct: 382 TALLTMYAKCGELDAARAVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGT 441
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ + ++VLAA + S ++ G IHG+V +V V +ALV MY+KCG L L
Sbjct: 442 RPNEYTFSNVLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKS 501
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
FE ++++++N++I HG +A + ++ + +G+ PDE T ++ L AC G
Sbjct: 502 AFEASGRKDLVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGS 561
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
+ GREI +R+ + ++ +V + G G LE A S +
Sbjct: 562 LQLGREIHSRVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDM------------- 608
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
G D+ A +++ YA+ G D V+ L ++V +G+R
Sbjct: 609 ------GQRDVLSWTA----------------MTSAYAQQGHADQVLDLYLEMVLHGIR 645
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 185/408 (45%), Gaps = 9/408 (2%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y + + C L + VH + +G GR+ + L+ Y I A F +
Sbjct: 45 YDELLQQCGRLGSLAEGKLVHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFA 104
Query: 167 DPDLVLC-NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
V C N M+S + G W+++L+L+ M G PD+ T ++ L +
Sbjct: 105 SIKAVACYNQMLSAYGKNGLWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAR 164
Query: 226 GIHGFCLKSSFDSYDYVS--SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
IH +++ D +S + LV+MY +C + A VF+ + + D V+W+++I+ Y+
Sbjct: 165 EIHASIIEAPQIIRDNLSLQNALVNMYGKCGSVEEARKVFDGIKNRDAVSWTSMISSYAN 224
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G +AL +++++ G + D + S L A K + G IH ++ E S V
Sbjct: 225 NGFCDEALDLYQQMDADGIQPDSITFTSALLACTK---LVDGKAIHARIVSSNME-SDFV 280
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
SAL++MY++CG + Q FE + ++++ + S++ +A + + + +G+
Sbjct: 281 GSALINMYARCGDVSSARQAFEKIQNKHVVCWTSLMTAYVQTCHYREALDLYGRMDHEGV 340
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
+ D T+ L AC G + +G+ I +R+ E G Q+ H ++ + G L+ A
Sbjct: 341 HADGVTYVTALGACASLGALKEGKAIHSRVF-ECGFQSLVVH-TALLTMYAKCGELDAAR 398
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
+ + + + A++S G++ A + Q+ R Y
Sbjct: 399 AVFNRVRQKRNVYCWTAMISAYAQAGHTQEALELYDQMVAEGTRPNEY 446
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 135/319 (42%), Gaps = 17/319 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S L ++H V + L + LV +YA L A+ F+ + ++
Sbjct: 451 VLAACSSSGDLEAGMKIHGHVENSELASNVAVQNALVTMYAKCGSLELAKSAFEASGRKD 510
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I AYA +A L++ + + PD T A AC+ + L R +H
Sbjct: 511 LVSWNAMIGAYAQHGLGREALDLYQTMTSQGVLPDEVTIASSLSACAISGSLQLGREIHS 570
Query: 129 GAIVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ + R S+ +ALV Y + ++ A +F+ + D++ +M S +A G D
Sbjct: 571 RVLKNQSFRSSLMVQTALVNMYGRCGRLETARSMFEDMGQRDVLSWTAMTSAYAQQGHAD 630
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS--- 244
+ L L+ M+ G P+E T ++ G LL+ +G+ F S +
Sbjct: 631 QVLDLYLEMVLHGIRPNEITFTSILVGCSHAGLLA--RGVECFLEMQSEHEVVPIREHFL 688
Query: 245 VLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+V + R + A + S+ + PD V W ++ D A R++ K+
Sbjct: 689 CMVDLLGRSGRLRDAEALVESMPYQPDSVAWLTVLGSCKTHSDADTAKRAARRV----KE 744
Query: 304 ADP------VLIASVLAAA 316
DP L++S+ AA
Sbjct: 745 LDPENTSLYSLLSSIFTAA 763
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 23/197 (11%)
Query: 289 KALYYFRKLNMQGKKADPVLIASV---------------------LAAAAKSANVWPGAV 327
KA + RKL KK PV SV L + ++ G +
Sbjct: 4 KASFVSRKLVFNLKKKAPVARISVSDALEQLDQRRHGYVELYDELLQQCGRLGSLAEGKL 63
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNIITYNSVILGLGLHG 386
+H ++++ G + + + L+ MY CG + L F+ + + + YN ++ G +G
Sbjct: 64 VHRHLLRTGHGRNQFLGNLLIQMYGNCGEIHLARAAFQNFASIKAVACYNQMLSAYGKNG 123
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG-IQAKTEH 445
+A E + + E+G PD+ T+ +L +C G + + REI + E I+
Sbjct: 124 LWNRALELYHRMCEEGPEPDKITYFIVLGSCSAVGSLREAREIHASIIEAPQIIRDNLSL 183
Query: 446 YIYMVKLLGLAGNLEEA 462
+V + G G++EEA
Sbjct: 184 QNALVNMYGKCGSVEEA 200
>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g68930-like [Cucumis
sativus]
Length = 695
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 169/575 (29%), Positives = 278/575 (48%), Gaps = 68/575 (11%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLL-RDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
LVLE ++++ +++ K L + + D F +L+ LYA L A+ LFDK +
Sbjct: 28 LVLECVRTNE-INQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFDKMLK 86
Query: 67 RSVFLWNSIIRAYALAHRFNDAKS-------------------------------LFKNL 95
R F WN+++ AYA + + K+ LFK +
Sbjct: 87 RDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRM 146
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
R +P +T I A ++ DL + +HG IV + +AL Y+K I
Sbjct: 147 QREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKCGEI 206
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
++A +FD ++ +LV N MISG+A G +K + L M G PD+ T+
Sbjct: 207 EQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM------- 259
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S +++ Y +C ++ A VF+ D+V W+
Sbjct: 260 ----------------------------STIIAAYCQCGRVDEARRVFSEFKEKDIVCWT 291
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A++ GY++ G AL F ++ ++ + D ++SV+++ AK A++ G +HG I
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILA 351
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G +++VSSAL+DMYSKCG++ VF M RN++++N++I+G +G A E F
Sbjct: 352 GLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELF 411
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
+++++ PD TF +L AC H + G+E F ++ ++G+ +HY MV LLG
Sbjct: 412 ENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGR 471
Query: 456 AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
G +E+A + I ++ D + LLS C G+ AE+ A LFE DP +ML
Sbjct: 472 TGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIML 531
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
SN YA GRW DV +R+ + ++K AG SW+
Sbjct: 532 SNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIE 566
>gi|356502400|ref|XP_003520007.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g31430-like [Glycine max]
Length = 591
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 162/579 (27%), Positives = 298/579 (51%), Gaps = 40/579 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS---ARILFDKTPQ 66
+ L KS +S+S+ K++ A + L +D KL+ +++++ L A +F+
Sbjct: 12 ISLLKSCKSMSQLKQIQAHIFCFGLQQDRDILNKLMA-FSMDSSLGDFNYANRIFNHIHH 70
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
S+F++N +I+A+ A SLF+ L + PDN+TY + + ++ +
Sbjct: 71 PSLFIYNLMIKAFVKRGSLRSAISLFQQLRERGVWPDNYTYPYVLKGIGCIGEVREGEKI 130
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + +GL D ++L+ Y++L L++ +VF+ + + D V N MISG+ C +
Sbjct: 131 HAFVVKTGLEFDPYVCNSLMDMYAELGLVEGFTQVFEEMPERDAVSWNIMISGYVRCKRF 190
Query: 187 DKSLQLFDWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++++ ++ M + + P+E T+V +S L +G+ IH + + + D + +
Sbjct: 191 EEAVDVYRRMQMESNEKPNEATVVSTLSACAVLRNLELGKEIHDY-IANELDLTPIMGNA 249
Query: 246 LVSMYARCNCMNSAYHVFNSLF-------------------------------HPDLVTW 274
L+ MY +C C++ A +F+++ D+V W
Sbjct: 250 LLDMYCKCGCVSVAREIFDAMIVKNVNCWTSMVTGYVICGQLDQARYLFERSPSRDVVLW 309
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+A+I GY Q + A+ F ++ ++G + D ++ ++L A+ + G IH Y+ +
Sbjct: 310 TAMINGYVQFNHFEDAIALFGEMQIRGVEPDKFIVVTLLTGCAQLGALEQGKWIHNYIDE 369
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ ++ +VS+AL++MY+KCG + +++F + + + ++ S+I GL ++G T +A E
Sbjct: 370 NRIKMDAVVSTALIEMYAKCGCIEKSLEIFNGLKDMDTTSWTSIICGLAMNGKTSEALEL 429
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F + GL PD+ TF A+L AC H GLV +GR++F M+ Y I+ EHY + LLG
Sbjct: 430 FEAMQTCGLKPDDITFVAVLSACGHAGLVEEGRKLFHSMSSIYHIEPNLEHYGCFIDLLG 489
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVS---GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
AG L+EA + LP + + GALLS C YGN D+ E +A L + +
Sbjct: 490 RAGLLQEAEELVKKLPDQNNEIIVPLYGALLSACRTYGNIDMGERLATALAKVKSSDSSL 549
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L++ YA RW+DV K+R + D G++K G S +
Sbjct: 550 HTLLASIYASADRWEDVRKVRSKMKDLGIKKVPGYSAIE 588
>gi|147807930|emb|CAN62155.1| hypothetical protein VITISV_032407 [Vitis vinifera]
Length = 585
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 163/548 (29%), Positives = 283/548 (51%), Gaps = 10/548 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV-LPSARILFDKTPQR 67
+L L + ++ S+ ++HA + +L+ D F A++L+ + + A ++F + Q
Sbjct: 14 LLSLLQXSKTSSQILQIHAQLITTNLISDTFAASRLLDSVVSKTLNVNYAELVFAQIHQP 73
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ F+ N++++ Y + A + + + L DN+TY + +AC L V
Sbjct: 74 NSFICNTMVKCYTESSTPERALRFYAEMRKKGLLGDNYTYPFVLKACGAMCGLLEGGLVQ 133
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G A+ G G D + L++ Y + A VFDG S+ DLV NSM+ G+ CG +
Sbjct: 134 GEAVKRGFGGDVFVVNGLISMYCRCGETGWARAVFDGFSEKDLVSWNSMLGGYVWCGEME 193
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVL 246
+ +FD M D + +I G + +G+ S + D VS + +
Sbjct: 194 NAQNMFDEM----PERDVVSWSIMIDGYGK----KMGEVNRARVFFDSMPTRDLVSWNSM 245
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ YA+ M A +FB + ++++WS +I GY+ D +AL FR++ QG K D
Sbjct: 246 IDGYAKVGEMEVAREIFBKMLQKNVISWSIMIDGYAXHRDSKEALNLFRQMLCQGIKPDR 305
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + ++A ++ + G IH Y+ ++ L ++V +ALVDMY KCG +F +
Sbjct: 306 VSVVGAVSACSQLGALDQGRWIHLYMKRNRMLLDIVVQTALVDMYLKCGSXDEARXIFNS 365
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M ERN++++N +I+GLG++GF +A E F + + + D+ F +L AC H LV +G
Sbjct: 366 MPERNVVSWNVMIVGLGMNGFGKEALECFXQMEMERIPMDDLLFLGVLMACSHANLVTEG 425
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
IF +M Y ++ K EHY +V LLG AG L++ + I S+P + A+ G+LL C
Sbjct: 426 LHIFNQMKGVYRLEPKLEHYGCLVDLLGRAGQLDQIQNIIQSMPMKPNAALWGSLLLACR 485
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
I+ N LAEIV +L E V++SN YA+ G W+ ++++R + + ++K+ G
Sbjct: 486 IHQNVTLAEIVVERLAELKADDSGVYVLMSNIYADVGMWEGMLRIRKLMKERKMKKDIGR 545
Query: 547 SWVSGSSN 554
S + N
Sbjct: 546 SVIEVDGN 553
>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 624
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 248/448 (55%), Gaps = 1/448 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D Y + + C+ L R VHG I S D + ++ L+ Y+K ++EA KVF
Sbjct: 50 DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + + D V ++ISG++ +L LF+ MLR G +P+E+TL +I
Sbjct: 110 DKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGC 169
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G +HGFC+K FDS +V S L+ +Y R M+ A VF++L + V+W+ALI G++
Sbjct: 170 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 229
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
++ KAL F+ + +G + AS+ A + + + G +H Y+I+ G +L
Sbjct: 230 RRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 289
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+ L+DMY+K G + ++F+ +++R+++++NS++ HGF +A +F ++ G
Sbjct: 290 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGG 349
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ P+E +F ++L AC H GL+++G + M ++ GI + HY+ +V LLG AG+L A
Sbjct: 350 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVLEAWHYVTIVDLLGRAGDLNRA 408
Query: 463 YSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAED 522
FI +P A+ ALL+ C ++ N++L A +FE DP V+L N YA
Sbjct: 409 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 468
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
GRW+D ++R + ++G++KE SWV
Sbjct: 469 GRWNDAARVRKKMKESGVKKEPACSWVE 496
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 194/420 (46%), Gaps = 6/420 (1%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ + +H + ++ D L+ +YA L AR +FDK P+R W ++I
Sbjct: 67 LTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVFDKMPERDFVTWTTLISG 126
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+ R DA LF +LR P+ FT + + +A + +HG + G +
Sbjct: 127 YSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSN 186
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGFWDKSLQLFDWML 197
SAL+ Y++ L+D+A VFD + + V N++I+G A CG +K+L+LF ML
Sbjct: 187 VHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRCGT-EKALELFQGML 245
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G P ++ L L G+ +H + +KS + + L+ MYA+ ++
Sbjct: 246 REGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIH 305
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F+ L D+V+W++L+T Y+Q G +A+ +F ++ G + + + SVL A +
Sbjct: 306 DARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRPNEISFLSVLTACS 365
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYN 376
S + G + + + G L +VD+ + G L ++ E M E +
Sbjct: 366 HSGLLDEGWHYYELMKKDGIVLEAWHYVTIVDLLGRAGDLNRALRFIEEMPIEPTAAIWK 425
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREIFTRMTE 435
+++ +H T + E L+PD+ +L GG ND + +M E
Sbjct: 426 ALLNACRMHKNTELGAYAAEHVFE--LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 483
>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Glycine max]
Length = 1033
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 281/545 (51%), Gaps = 5/545 (0%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLRD-PFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
E S + + +E+HA + + +L+ LV LYA N + +AR +F P +
Sbjct: 362 EFSNLKEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDT 421
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WNSII RF +A + F + R + P F+ +C+ + + +HG
Sbjct: 422 VSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGE 481
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC-GFWDK 188
I GL D S+AL+T Y++ ++E KVF + + D V NS I A +
Sbjct: 482 GIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQ 541
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+++ F M++ G P+ T + ++S + SLL +G+ IH LK S + + + L++
Sbjct: 542 AIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVADDNAIENTLLA 601
Query: 249 MYARCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
Y +C M +F+ + D V+W+A+I+GY G KA+ + +G++ D
Sbjct: 602 FYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDF 661
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A+VL+A A A + G +H I+ E V+V SALVDMY+KCG + + FE M
Sbjct: 662 TLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELM 721
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
RNI ++NS+I G HG +A + F + + G PD TF +L AC H GLV++G
Sbjct: 722 PVRNIYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACSHVGLVDEGF 781
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL-SCCH 486
E F M E Y + + EH+ MV LLG AG++++ FI ++P + + +L +CC
Sbjct: 782 EHFKSMGEVYELAPRIEHFSCMVDLLGRAGDVKKLEEFIKTMPMNPNALIWRTILGACCR 841
Query: 487 IYG-NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
N++L A L E +P V+LSN +A G+W+DV + R + + ++KEAG
Sbjct: 842 ANSRNTELGRRAAKMLIELEPLNAVNYVLLSNMHAAGGKWEDVEEARLAMRNAEVKKEAG 901
Query: 546 VSWVS 550
SWV+
Sbjct: 902 CSWVT 906
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 125/452 (27%), Positives = 219/452 (48%), Gaps = 35/452 (7%)
Query: 4 NLHFLVLELSKSHQSLSRTKE----LHALVAKASLLRDPFYATKLVRLYALNNVLPSARI 59
+LHF L L + S T E LH + K L D F+ LV ++ L SA+
Sbjct: 36 HLHFPPLNLDYNRYRDSCTVEDAHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQK 95
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE--- 116
LFD+ PQ+++ W+ ++ YA ++A LF+ ++ L P+++ RAC E
Sbjct: 96 LFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGP 155
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL-IDEAIKVFDGVSDPDLVLCNS 175
N G+ +HG S D + S+ L++ YS S ID+A +VF+ + NS
Sbjct: 156 NMLKLGME-IHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNS 214
Query: 176 MISGFAHCGFWDKSLQLFDWMLR----LGKTPDEYTLVGLISGLWEPSLLSVG----QGI 227
+IS + G + +LF M R L P+EYT L++ SL+ G + +
Sbjct: 215 IISVYCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVT--VACSLVDCGLTLLEQM 272
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
KSSF YV S LVS +AR ++SA +F + + VT + L+ G ++Q
Sbjct: 273 LARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQG 332
Query: 288 GKALYYFRKLNMQGKKADPVLI-----ASVLAAAAKSANV----WPGAVIHGYVIQHGF- 337
+A F+++ D V I A +L+A + +N+ G +H Y+I++
Sbjct: 333 EEAAKIFKEMK------DLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALV 386
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
++ +++ +ALV++Y+KC + +F+ M ++ +++NS+I GL + +A F
Sbjct: 387 DVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHT 446
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ G+ P + + + L +C G + G++I
Sbjct: 447 MRRNGMVPSKFSVISTLSSCASLGWIMLGQQI 478
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L R E+HA +A L + + LV +YA + A F+ P R+
Sbjct: 666 VLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRN 725
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
++ WNS+I YA A LF + + PD+ T+ + ACS
Sbjct: 726 IYSWNSMISGYARHGHGGKALKLFTQMKQHGQLPDHVTFVGVLSACS 772
>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
Length = 643
Score = 268 bits (684), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 167/506 (33%), Positives = 263/506 (51%), Gaps = 25/506 (4%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV----H 127
W IRA A F DA SLF + R P + A + A + L GL + H
Sbjct: 16 WAQQIRAAAAEGHFCDAVSLFLRM-RASAAPRSSVPASLPAALKSCAAL-GLSALGASLH 73
Query: 128 GGAIVSGLGRDSITSSALVTAYSKL----------SLID--------EAI-KVFDGVSDP 168
AI SG D T++AL+ Y K+ +++D E++ KVFD + +
Sbjct: 74 ALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER 133
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
D+V N+++ G A G ++L M R G PD +TL ++ E + + G +H
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVH 193
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
GF ++ FDS +V S L+ MYA C + + VF++L D + W++L+ G +Q G
Sbjct: 194 GFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVE 253
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+AL FR++ G + PV +S++ A++ G +H YVI GFE +V +SS+L+
Sbjct: 254 EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLI 313
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
DMY KCG + + +F+ MS +++++ ++I+G LHG +A F + P+
Sbjct: 314 DMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHI 373
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
TF A+L AC H GLV+ G + F M+ YGI EH+ + LG AG L+EAY+FI
Sbjct: 374 TFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISK 433
Query: 469 LPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDV 528
+ +V LL C ++ N+ LAE VA ++ E +PR V+LSN Y+ GRW++
Sbjct: 434 MQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEA 493
Query: 529 MKLRDDIVDNGLRKEAGVSWVSGSSN 554
LR+ + G++K+ SW+ S
Sbjct: 494 AHLRESMRKKGMKKDPACSWIEVKSK 519
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 185/397 (46%), Gaps = 21/397 (5%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYAL-------------------NNVLPSARILFDKTP 65
LHAL ++ D F A L+ LY + S R +FD+
Sbjct: 72 LHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMI 131
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R V WN+++ A R ++A + + R +PD+FT + + +E +D+
Sbjct: 132 ERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLE 191
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG A +G D S+L+ Y+ + D ++KVFD + D +L NS+++G A G
Sbjct: 192 VHGFAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGS 251
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+++L +F ML+ G P T LI + L G+ +H + + F+ ++SS
Sbjct: 252 VEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSS 311
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L+ MY +C ++ A+ +F+ + PD+V+W+A+I GY+ G +AL F ++ + K +
Sbjct: 312 LIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPN 371
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQH-GFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ +VL A + + V G + H G ++ +AL D + G L
Sbjct: 372 HITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFI 431
Query: 365 ETMSERNIIT-YNSVILGLGLHGFTYQAFEFFRDIIE 400
M + + +++++ +H T A E + I+E
Sbjct: 432 SKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME 468
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 46/98 (46%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL K+LHA V + F ++ L+ +Y + A +FDK V W ++I
Sbjct: 286 SLRFGKQLHAYVICGGFEDNVFISSSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIM 345
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
YAL +A LF+ + KP++ T+ + ACS
Sbjct: 346 GYALHGPAREALVLFERMELGNAKPNHITFLAVLTACS 383
>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Cucumis sativus]
Length = 654
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 160/495 (32%), Positives = 265/495 (53%), Gaps = 8/495 (1%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENS 118
+F T V WNS++RA+ ++ A + +L R++ PD FT+ + + C+
Sbjct: 34 VFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLL 93
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
+ + +HG + L D + L+ Y+ + A +F+ + + V+ SMIS
Sbjct: 94 EFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMIS 153
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
G+ +++L L+ M G +PDE T+ L+S E L VG +H +
Sbjct: 154 GYMKNHCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKI 213
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL- 297
+ S LV+MYA+C + +A VF+ L D+ WSALI GY + +AL FR++
Sbjct: 214 CAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVA 273
Query: 298 ---NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
NM + + V I +V++A A+ ++ G +H Y+ + SV ++++L+DM+SKC
Sbjct: 274 GGSNM---RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKC 330
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G + ++F++MS +++I++NS++ GL LHG +A F + L PDE TF +L
Sbjct: 331 GDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVL 390
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC H GLV +G+++F + YG++ K+EHY MV LL AG L EA FI +P D
Sbjct: 391 TACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPD 450
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
A+ G++L C +Y N +L E A L E +P ++LSN YA W++V K+R+
Sbjct: 451 GAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRKMWNEVKKVREL 510
Query: 535 IVDNGLRKEAGVSWV 549
+ + G++K G S V
Sbjct: 511 MNEKGIQKTPGCSSV 525
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 166/348 (47%), Gaps = 4/348 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH V K L D + T L+ +YA L SAR LF++ R+ +W S+I Y
Sbjct: 99 KVLHGQVVKYMLHSDLYIETTLLNMYAACGDLKSARFLFERMGHRNKVVWTSMISGYMKN 158
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
H N+A L+K + PD T A + AC+E DL +H + ++
Sbjct: 159 HCPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLG 218
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y+K + A +VFD +SD D+ +++I G+ ++LQLF +
Sbjct: 219 SALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNM 278
Query: 203 -PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+E T++ +IS + L G+ +H + ++ +++ L+ M+++C +++A
Sbjct: 279 RPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDAAKR 338
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F+S+ + DL++W++++ G + G +AL F + + D + VL A + +
Sbjct: 339 IFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGL 398
Query: 322 VWPGAVIHGYVIQ--HGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
V G + Y I+ +G L +VD+ + G L + M
Sbjct: 399 VQEGKKLF-YEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAREFIRVM 445
>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 882
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 271/535 (50%), Gaps = 2/535 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L +++H V + +D F A LV +Y+ + A +F+K P V WN+ I
Sbjct: 219 RDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFI 278
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ A L + + L P+ FT + + +AC+ R +HG + +
Sbjct: 279 SGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVAD 338
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D + LV Y+K +D+A KVFD + DL+L N++ISG +H G + L LF M
Sbjct: 339 FDEFVAVGLVDMYAKHGFLDDARKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRM 398
Query: 197 LRLGKTPD--EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G D TL ++ + + +H K S +V + L+ Y +C
Sbjct: 399 RKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCG 458
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ A VF D+++ + ++T SQ A+ F ++ +G + D +++S+L
Sbjct: 459 QLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLN 518
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + G +H ++I+ F V +ALV Y+KCG + F + ER I++
Sbjct: 519 ACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVS 578
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
++++I GL HG +A + F ++++G+ P+ T +++L AC H GLV+D ++ F M
Sbjct: 579 WSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMK 638
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
E +GI EHY M+ +LG AG LE+A + ++P + AV GALL ++ + +L
Sbjct: 639 ETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELG 698
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ A +LF +P K V+L+NTYA G WD++ K+R + D+ ++KE +SWV
Sbjct: 699 RMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWV 753
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/419 (30%), Positives = 213/419 (50%), Gaps = 6/419 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK----TPQRSVFLWNSIIRAY 79
++HAL L+ D F A LV +Y ++ AR +FD+ +R+ WN++I AY
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ DA +F+ ++ + +P+ F ++C+ AC+ + DL R VHG + +G +D
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDV 240
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
T++ALV YSKL I+ A VF+ + D+V N+ ISG G ++L+L M
Sbjct: 241 FTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSS 300
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P+ +TL ++ ++G+ IHGF +K+ D ++V+ LV MYA+ ++ A
Sbjct: 301 GLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDA 360
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD--PVLIASVLAAAA 317
VF+ + DL+ W+ALI+G S G +G+ L F ++ +G D +ASVL + A
Sbjct: 361 RKVFDFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTA 420
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
S + +H + G V + L+D Y KCG L I+VF+ +II+ +
Sbjct: 421 SSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTT 480
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++ L A + F ++ KGL PD S+LL AC G+++ + +
Sbjct: 481 MMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQGKQVHAHLIKR 539
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/432 (25%), Positives = 212/432 (49%), Gaps = 18/432 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL LH+ + K+ LL ++ L+ LY+ + +AR +FD+ P W+S++
Sbjct: 18 RSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLV 75
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVS 133
AY+ DA F+ + + + F + + C+ P +RF VH A+ +
Sbjct: 76 TAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CA-----PDVRFGAQVHALAVAT 129
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFD---GV-SDPDLVLCNSMISGFAHCGFWDKS 189
L D ++ALV Y ++DEA ++FD GV + + V N+MIS + +
Sbjct: 130 RLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGDA 189
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
+ +F M+ G+ P+E+ +++ L G+ +HG +++ ++ + ++ LV M
Sbjct: 190 IGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVDM 249
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y++ + A VF + D+V+W+A I+G G +AL ++ G + +
Sbjct: 250 YSKLGDIEMAATVFEKMPAADVVSWNAFISGCVTHGHDHRALELLLQMKSSGLVPNVFTL 309
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+SVL A A + G IHG++++ + V+ LVDMY+K G+L +VF+ M
Sbjct: 310 SSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPR 369
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD--ESTFSALLCACCHGGLVNDGR 427
R++I +N++I G G + F + ++GL+ D +T +++L + + R
Sbjct: 370 RDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEAICHTR 429
Query: 428 EIFTRMTEEYGI 439
++ + E+ G+
Sbjct: 430 QVHA-LAEKIGL 440
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 172/350 (49%), Gaps = 13/350 (3%)
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
S+ L+T YS+ L A VFD + DP V +S+++ +++ G +L F M G
Sbjct: 40 SNHLLTLYSRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGV 99
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+E+ L ++ + + G +H + + +V++ LV++Y ++ A
Sbjct: 100 PCNEFALPVVLKCAPD---VRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARR 156
Query: 262 VFNSLF----HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+F+ + V+W+ +I+ Y + G A+ FR++ G++ + + V+ A
Sbjct: 157 MFDEYVGVGGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACT 216
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
S ++ G +HG V++ G+E V ++ALVDMYSK G + + VFE M +++++N+
Sbjct: 217 GSRDLEAGRQVHGAVVRTGYEKDVFTANALVDMYSKLGDIEMAATVFEKMPAADVVSWNA 276
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
I G HG ++A E + GL P+ T S++L AC G N GR+I M +
Sbjct: 277 FISGCVTHGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAV 336
Query: 438 GIQAKTEHYIY--MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
A + ++ +V + G L++A +P+ D + AL+S C
Sbjct: 337 ---ADFDEFVAVGLVDMYAKHGFLDDARKVFDFMPRR-DLILWNALISGC 382
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 134/298 (44%), Gaps = 13/298 (4%)
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+TP+ T+ ++ L G +H LKS S+ L+++Y+RC ++A
Sbjct: 2 RTPE--TIGSALARFGTSRSLFAGAHLHSHLLKSGL--LAGFSNHLLTLYSRCRLPSAAR 57
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+ + P V+WS+L+T YS G AL FR + +G + + VL A
Sbjct: 58 AVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCA---P 114
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM----SERNIITYN 376
+V GA +H + V V++ALV +Y G + ++F+ ERN +++N
Sbjct: 115 DVRFGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWN 174
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++I + + A FR+++ G P+E FS ++ AC + GR++ +
Sbjct: 175 TMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRT 234
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
G + +V + G++E A + +P D A +S C +G+ A
Sbjct: 235 -GYEKDVFTANALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTHGHDHRA 290
>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
Length = 745
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 174/587 (29%), Positives = 286/587 (48%), Gaps = 60/587 (10%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAYAL 81
H L+ + F LV +Y+ L A ++FD+ QR V WNSI+ A+
Sbjct: 32 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 91
Query: 82 AHRFNDAKSLFKNL-LRTQLKPDN-----FTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ A LF + L KP N + I AC +P + VHG AI +G
Sbjct: 92 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 151
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD- 194
D +AL+ AY+K L++ A+KVF+ + D+V N+M++G++ G + + +LF
Sbjct: 152 FLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKN 211
Query: 195 ------------W----------------------MLRLGKTPDEYTLVGLISGLWEPSL 220
W M+ G P+ T++ ++S
Sbjct: 212 MRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGA 271
Query: 221 LSVGQGIHGFCLKSSFDSYD----------YVSSVLVSMYARCNCMNSAYHVFNS--LFH 268
S G IH + LK+ + D V + L+ MY++C +A +F+ L
Sbjct: 272 FSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEE 331
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQ--GKKADPVLIASVLAAAAKSANVWPGA 326
++VTW+ +I G++Q GD AL F ++ + G + I+ +L A A A + G
Sbjct: 332 RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGK 391
Query: 327 VIHGYVIQH-GFELSV-MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
IH YV++H ++ S V++ L++MYSKCG + VF++MS+++ I++ S++ G G+
Sbjct: 392 QIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM 451
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + F + + G PD+ TF +L AC H G+V+ G F M+ +YG+ + E
Sbjct: 452 HGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAE 511
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY Y + LL G L++A+ + +P V ALLS C ++ N +LAE ++L E
Sbjct: 512 HYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 571
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
+ ++SN YA GRW DV ++R + +G++K G SWV G
Sbjct: 572 NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQG 618
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 179/396 (45%), Gaps = 64/396 (16%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRDSITSSALVTAYSK 151
+LR + D+FT + +AC E LP R HG +G + +ALV YS+
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGE---LPSYRCGSAFHGLICCNGFESNVFICNALVAMYSR 57
Query: 152 LSLIDEAIKVFDGVSD---PDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKTP---- 203
++EA +FD ++ D++ NS++S +L LF M L + + P
Sbjct: 58 CGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 117
Query: 204 -DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D ++V ++ + + +HG +++ +V + L+ YA+C M +A V
Sbjct: 118 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKV 177
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYG---------------------------------- 288
FN + D+V+W+A++ GYSQ G++
Sbjct: 178 FNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCS 237
Query: 289 -KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH----------GF 337
+AL FR++ G + V I SVL+A A G IH Y +++ G
Sbjct: 238 HEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGE 297
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGLHGFTYQAFEFF 395
+ +MV +AL+DMYSKC +F+ + ERN++T+ +I G +G + A + F
Sbjct: 298 DEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLF 357
Query: 396 RDIIEK--GLNPDESTFSALLCACCHGGLVNDGREI 429
++I + G+ P+ T S +L AC H + G++I
Sbjct: 358 VEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 393
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 127/247 (51%), Gaps = 9/247 (3%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
MLR G D +TL ++ E G HG + F+S ++ + LV+MY+RC
Sbjct: 1 MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60
Query: 256 MNSAYHVFNSLFH---PDLVTWSALITGYSQQGDYGKALYYFRKLNM------QGKKADP 306
+ A +F+ + D+++W+++++ + + + AL F K+ + +++D
Sbjct: 61 LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ I ++L A V +HG I++G L V V +AL+D Y+KCG + ++VF
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNM 180
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M ++++++N+++ G G AFE F+++ ++ + D T++A++ G ++
Sbjct: 181 MEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEA 240
Query: 427 REIFTRM 433
+F +M
Sbjct: 241 LNVFRQM 247
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 159/368 (43%), Gaps = 51/368 (13%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +++ +TKE+H + D F L+ YA ++ +A +F+ +
Sbjct: 126 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 185
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI-----TRACSENS----- 118
V WN+++ Y+ + F A LFKN+ + + D T+ + R CS +
Sbjct: 186 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 245
Query: 119 ------DLPGL--------------RFVHGGAI---------------VSGLGRDSITSS 143
LP F G I G D + +
Sbjct: 246 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 305
Query: 144 ALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR--L 199
AL+ YSK A +FD + + ++V MI G A G + +L+LF M+
Sbjct: 306 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 365
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYDY-VSSVLVSMYARCNCMN 257
G P+ YT+ ++ + + +G+ IH + L+ +DS Y V++ L++MY++C ++
Sbjct: 366 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 425
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A HVF+S+ ++W++++TGY G +AL F K+ G D + VL A +
Sbjct: 426 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYACS 485
Query: 318 KSANVWPG 325
V G
Sbjct: 486 HCGMVDQG 493
>gi|356495419|ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Glycine max]
Length = 666
Score = 268 bits (684), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 160/508 (31%), Positives = 271/508 (53%), Gaps = 2/508 (0%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F L+ +Y +A+++FD +R+V WN++I Y + DA +++ ++
Sbjct: 147 DTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMM 206
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
++PD T + AC ++ R VH G + + +ALV Y K +
Sbjct: 207 DVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMK 266
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
EA + G+ D D+V ++I+G+ G +L L M G P+ ++ L+S
Sbjct: 267 EAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACG 326
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
L+ G+ +H + ++ +S V + L++MYA+CNC N +Y VF W+A
Sbjct: 327 SLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNA 386
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
L++G+ Q +A+ F+++ ++ + D S+L A A A++ IH Y+I+ G
Sbjct: 387 LLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSG 446
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMS--ERNIITYNSVILGLGLHGFTYQAFEF 394
F + V+S LVD+YSKCG LG Q+F +S +++II ++++I G HG A +
Sbjct: 447 FLYRLEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKL 506
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F +++ G+ P+ TF+++L AC H GLVN+G +F M +++ I + +HY M+ LLG
Sbjct: 507 FNQMVQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLG 566
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG L +AY+ I ++P + AV GALL C I+ N +L E+ A F+ +P V+
Sbjct: 567 RAGRLNDAYNLIRTMPITPNHAVWGALLGACVIHENVELGEVAARWTFKLEPENTGNYVL 626
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
L+ YA GRW D ++RD + + GLRK
Sbjct: 627 LAKLYAAVGRWGDAERVRDMVNEVGLRK 654
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 118/401 (29%), Positives = 198/401 (49%), Gaps = 1/401 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
QS S TK LHAL+ + +KL YA + A LFDK Q +F WN+++
Sbjct: 25 QSHSETKRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMM 84
Query: 77 RAYALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
R Y R DA +LF +L + + PD FTY + +AC + S + +HG G
Sbjct: 85 RMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGY 144
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D+ + L+ Y + A VFD + + ++ N+MI+G+ + ++ ++
Sbjct: 145 DSDTFVQNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGR 204
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ +G PD T+V ++ + +G+ +H + F V + LV MY +C
Sbjct: 205 MMDVGVEPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQ 264
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M A+ + + D+VTW+ LI GY GD AL + +G K + V IAS+L+A
Sbjct: 265 MKEAWLLAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSA 324
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ G +H + I+ E V+V +AL++MY+KC L +VF S++ +
Sbjct: 325 CGSLVYLNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPW 384
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
N+++ G + +A E F+ ++ K + PD +TF++LL A
Sbjct: 385 NALLSGFIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPA 425
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 153/305 (50%), Gaps = 1/305 (0%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +H + G+ S S L T Y++ A +FD +S P L N+M+ +
Sbjct: 31 KRLHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQI 90
Query: 184 GFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G +L LF ML G+T PD++T +I + SL+ VG GIHG K +DS +V
Sbjct: 91 GRPFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFV 150
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++MY +A VF+ + +++W+ +I GY + A+ + ++ G
Sbjct: 151 QNTLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGV 210
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D + SVL A NV G +H V + GF +++V +ALVDMY KCG +
Sbjct: 211 EPDCATVVSVLPACGLLKNVELGREVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWL 270
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+ + M +++++T+ ++I G L+G A + +G+ P+ + ++LL AC
Sbjct: 271 LAKGMDDKDVVTWTTLINGYILNGDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVY 330
Query: 423 VNDGR 427
+N G+
Sbjct: 331 LNHGK 335
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 160/362 (44%), Gaps = 7/362 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+E+H LV + + LV +Y + A +L + V W ++I Y L
Sbjct: 234 REVHTLVQEKGFWGNIVVRNALVDMYVKCGQMKEAWLLAKGMDDKDVVTWTTLINGYILN 293
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A L + +KP++ + A + AC L + +H AI + + I
Sbjct: 294 GDARSALMLCGMMQCEGVKPNSVSIASLLSACGSLVYLNHGKCLHAWAIRQKIESEVIVE 353
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K + + + KVF G S N+++SGF ++++LF ML
Sbjct: 354 TALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSGFIQNRLAREAIELFKQMLVKDVQ 413
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD T L+ + L IH + ++S F V+S+LV +Y++C + A+ +
Sbjct: 414 PDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYRLEVASILVDIYSKCGSLGYAHQI 473
Query: 263 FN--SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
FN SL D++ WSA+I Y + G A+ F ++ G K + V SVL A + +
Sbjct: 474 FNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQMVQSGVKPNHVTFTSVLHACSHAG 533
Query: 321 NVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
V G + +++ QH V + ++D+ + G L + TM IT N +
Sbjct: 534 LVNEGFSLFNFMLKQHQIISHVDHYTCMIDLLGRAGRLNDAYNLIRTMP----ITPNHAV 589
Query: 380 LG 381
G
Sbjct: 590 WG 591
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 6/249 (2%)
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H L S + S L + YA+C+ + A H+F+ L P L +W+A++ Y Q G
Sbjct: 33 LHALILTLGIFSSSNLCSKLATTYAQCHHASYASHLFDKLSQPCLFSWNAMMRMYVQIGR 92
Query: 287 YGKALYYFRKLNMQGKK-ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
AL F ++ G+ D V+ A + + G IHG + G++ V +
Sbjct: 93 PFDALNLFVEMLGSGRTLPDKFTYPVVIKACGDLSLIDVGVGIHGQTFKFGYDSDTFVQN 152
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
L+ MY G VF+ M ER +I++N++I G + A + +++ G+ P
Sbjct: 153 TLLAMYMNAGEKEAAQLVFDPMQERTVISWNTMINGYFRNNCAEDAVNVYGRMMDVGVEP 212
Query: 406 DESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
D +T ++L AC V GRE+ T + +E G +V + G ++EA
Sbjct: 213 DCATVVSVLPACGLLKNVELGREVHT-LVQEKGFWGNIVVRNALVDMYVKCGQMKEA--- 268
Query: 466 IWSLPKPVD 474
W L K +D
Sbjct: 269 -WLLAKGMD 276
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 125/268 (46%), Gaps = 12/268 (4%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ K LHA + + + T L+ +YA N + +F T ++ WN+++
Sbjct: 331 LNHGKCLHAWAIRQKIESEVIVETALINMYAKCNCGNLSYKVFMGTSKKRTAPWNALLSG 390
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ +A LFK +L ++PD+ T+ + A + +DL +H I SG
Sbjct: 391 FIQNRLAREAIELFKQMLVKDVQPDHATFNSLLPAYAILADLQQAMNIHCYLIRSGFLYR 450
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVS--DPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+S LV YSK + A ++F+ +S D D+++ +++I+ + G +++LF+ M
Sbjct: 451 LEVASILVDIYSKCGSLGYAHQIFNIISLKDKDIIIWSAIIAAYGKHGHGKMAVKLFNQM 510
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-----SSFDSYDYVSSVLVSMYA 251
++ G P+ T ++ L++ G + F LK S D Y + ++ +
Sbjct: 511 VQSGVKPNHVTFTSVLHACSHAGLVNEGFSLFNFMLKQHQIISHVDHY----TCMIDLLG 566
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALI 278
R +N AY++ ++ P+ W AL+
Sbjct: 567 RAGRLNDAYNLIRTMPITPNHAVWGALL 594
>gi|449519723|ref|XP_004166884.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 636
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 298/551 (54%), Gaps = 12/551 (2%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
LHFL + + +H+S R + HA V L ++ F TKL+ Y++ L ++FD
Sbjct: 34 LHFL--QHAINHRSQKRIHQSHARVITHGLGQNTFLITKLISAYSICGDLKELNLIFDLA 91
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
++V++WNS+I Y F+ A F + + + PD+FT + + +A +E ++ +
Sbjct: 92 SIKTVYIWNSLISGYVKKGMFHGAFGRFNEMQKCNIVPDDFTLSILAKASNELGNVVVAK 151
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG---FA 181
+HG ++ G D I +++L++ Y K E++K+F+ + + + N +++G F+
Sbjct: 152 SIHGKSLRLGFISDIIVANSLISMYFKYGECKESLKLFNEMPERNSGSWNVLLAGYASFS 211
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFD--- 237
C + ++ + M G PD +T+ L+ P+ LS G+ +H + +K+ D
Sbjct: 212 DCFYVKEAWEAVRNMQIDGIKPDAFTISSLLQFCGHPNGKLSYGKELHCYIVKNELDLDS 271
Query: 238 -SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
S ++ L+ MY+R N ++ +VF+ + ++ W+A+++GY+Q D KAL F +
Sbjct: 272 GSKFHIGCGLIEMYSRENNTIASRYVFDQIKSRNIYVWTAMVSGYAQNEDPDKALILFHE 331
Query: 297 LNMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ M+ G + V + S+L A + A + G IHGY I+ + V + +AL+D YSKCG
Sbjct: 332 MQMKDGIVPNKVSLVSLLPACSLHAGLMNGKQIHGYAIRKEYHNDVTLCNALIDTYSKCG 391
Query: 356 YLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
L +VFE+ S ++ I++ ++I GL+G ++ + D++E+ + PD+ T A+L
Sbjct: 392 SLEYAKKVFESDSFCKDTISWTTLISAYGLYGLAEKSIRLYNDMVERSIKPDQITVLAVL 451
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC GLVN+G +++ +E+ I+ E +V +LG +G LE+A+SFI ++
Sbjct: 452 SACGRSGLVNEGLQLYNTAVQEHKIEPTAEICAAVVYMLGNSGELEQAFSFISTMMVEPG 511
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
P V GAL+S Y N+++ E+ L E +P + + LSN YA RWD V +LR+
Sbjct: 512 PGVWGALVSASIKYRNNEMLELAYRYLVELEPDNPSNFISLSNLYASASRWDAVAELRNT 571
Query: 535 IVDNGLRKEAG 545
+ + K G
Sbjct: 572 MKERENVKVVG 582
>gi|413918370|gb|AFW58302.1| hypothetical protein ZEAMMB73_070872 [Zea mays]
Length = 688
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 186/611 (30%), Positives = 287/611 (46%), Gaps = 71/611 (11%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVF 70
+L +S SL + H V K+ + + F LV YA L AR +FD P R+ F
Sbjct: 25 DLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIPLRNTF 84
Query: 71 LWNSIIRAYALAHRFNDAKSLFK--------------------------NLLR--TQLKP 102
+N+++ AYA R ++A++LF+ + LR +
Sbjct: 85 SYNALLSAYARLGRPDEARALFEAIPDPDQCSYNAVVAALARHGRGHAGDALRFLAAMHA 144
Query: 103 DNF-----TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
D+F ++A AC+ DL VHG S D +ALV Y+K +
Sbjct: 145 DDFVLNAYSFASALSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVD 204
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +VFD + + ++V NS+I+ + G ++L LF M+ G PDE TL ++S
Sbjct: 205 ARRVFDAMPERNVVSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAG 264
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARC------NCM-------------- 256
+ G+ +H +K D V ++ LV MYA+C C+
Sbjct: 265 LAAEREGRQVHAHMVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETS 324
Query: 257 -----------NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
A VF+ + +++ W+ LI Y+Q G+ +A+ F +L
Sbjct: 325 ILAGYAKSANVEDAQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPT 384
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGL 359
+VL A A + G H +V++ GF E V V ++LVDMY K G +
Sbjct: 385 HYTYGNVLNACGNIAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDD 444
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
G +VFE M+ R+ +++N++I+G +G A F ++ NPD T +L AC H
Sbjct: 445 GAKVFERMAARDNVSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGH 504
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV++GR F MTE++GI +HY MV LLG AG+L+EA I +P D +
Sbjct: 505 SGLVDEGRRHFHFMTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWA 564
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
+LL C ++ N +L E A +LFE DP V+LSN YAE G+W DV ++R + D G
Sbjct: 565 SLLGACRLHKNVELGERTAGRLFELDPENSGPYVLLSNMYAEMGKWADVFRVRRSMKDRG 624
Query: 540 LRKEAGVSWVS 550
+ K+ G SW+
Sbjct: 625 VSKQPGCSWIE 635
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 183/416 (43%), Gaps = 40/416 (9%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L + + L +++H LVA++ D T LV +YA AR +FD P+R+V
Sbjct: 158 LSACAAEKDLRTGEQVHGLVARSPHADDVHIGTALVDMYAKCERPVDARRVFDAMPERNV 217
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WNS+I Y +A LF ++ T PD T + + AC+ + R VH
Sbjct: 218 VSWNSLITCYEQNGPVGEALVLFVEMMATGFFPDEVTLSSVMSACAGLAAEREGRQVHAH 277
Query: 130 AIVSGLGRDS--------------------------------ITSSALVTAYSKLSLIDE 157
+ RD ++ ++++ Y+K + +++
Sbjct: 278 MVKRDRLRDDMVLNNALVDMYAKCGRTWEARCIFDSMPSRSVVSETSILAGYAKSANVED 337
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A VF + + +++ N +I+ +A G +++++LF + R P YT +++
Sbjct: 338 AQVVFSQMVEKNVIAWNVLIAAYAQNGEEEEAIRLFVQLKRDSIWPTHYTYGNVLNACGN 397
Query: 218 PSLLSVGQGIHGFCLKSSF------DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
++L +GQ H LK F +S +V + LV MY + ++ VF + D
Sbjct: 398 IAVLQLGQQAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDN 457
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV-IHG 330
V+W+A+I GY+Q G AL+ F ++ + D V + VL+A S V G H
Sbjct: 458 VSWNAMIVGYAQNGRAKDALHLFERMLCSNENPDSVTMIGVLSACGHSGLVDEGRRHFHF 517
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM-SERNIITYNSVILGLGLH 385
HG S + +VD+ + G+L ++ + M +E + + + S++ LH
Sbjct: 518 MTEDHGITPSRDHYTCMVDLLGRAGHLKEAEELIKDMPTEPDSVLWASLLGACRLH 573
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 310 ASVLAAAAKSANVWPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+S LA +SA PGA HG V++ + + LV Y++ G L +VF+ +
Sbjct: 20 SSPLADLLRSAPSLPGARAAHGCVLKSPVAGETFLLNTLVSTYARLGRLREARRVFDGIP 79
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
RN +YN+++ G +A F I + PD+ +++A++ A G
Sbjct: 80 LRNTFSYNALLSAYARLGRPDEARALFEAIPD----PDQCSYNAVVAALARHG 128
>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Glycine max]
Length = 780
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 168/531 (31%), Positives = 272/531 (51%), Gaps = 5/531 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA V K D F T L+ Y++ + +AR +FD + + W ++ YA +
Sbjct: 126 VHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYC 185
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
D+ LF + +P+NFT + ++C+ + VHG A+ RD A
Sbjct: 186 HEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIA 245
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-P 203
L+ Y+K I EA + F+ + DL+ + MIS +A ++L+LF M + P
Sbjct: 246 LLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVP 305
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+ +T ++ LL++G IH LK DS +VS+ L+ +YA+C + ++ +F
Sbjct: 306 NNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLF 365
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSAN 321
+ V W+ +I GY Q GD KAL F NM G P V +SVL A+A
Sbjct: 366 TGSTEKNEVAWNTIIVGYVQLGDGEKALNLFS--NMLGLDIQPTEVTYSSVLRASASLVA 423
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ PG IH I+ + +V+++L+DMY+KCG + F+ M +++ +++N++I G
Sbjct: 424 LEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQDEVSWNALICG 483
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+HG +A F + + P++ TF +L AC + GL++ GR F M ++YGI+
Sbjct: 484 YSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFKSMLQDYGIEP 543
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY MV LLG +G +EA I +P V ALL C I+ N DL ++ A ++
Sbjct: 544 CIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGKVCAQRV 603
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
E +P+ A V+LSN YA RWD+V +R ++ ++KE G+SWV
Sbjct: 604 LEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVENQ 654
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 192/411 (46%), Gaps = 3/411 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH + K D F L+ Y L A LFD+ P + + ++ + ++ +
Sbjct: 23 KSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLFDEMPLTNTVSFVTLAQGFSRS 82
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
H+F A+ L L R + + F + + + VH G D+
Sbjct: 83 HQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLADTCLSVHAYVYKLGHQADAFVG 142
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ AYS +D A +VFDG+ D+V M++ +A + SL LF M +G
Sbjct: 143 TALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYAENYCHEDSLLLFCQMRIMGYR 202
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ +T+ + VG+ +HG LK +D YV L+ +Y + + A
Sbjct: 203 PNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGEIAEAQQF 262
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSA 320
F + DL+ WS +I+ Y+Q +AL F ++ Q P ASVL A A
Sbjct: 263 FEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMR-QSSVVVPNNFTFASVLQACASLV 321
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G IH V++ G + +V VS+AL+D+Y+KCG + +++F +E+N + +N++I+
Sbjct: 322 LLNLGNQIHSCVLKVGLDSNVFVSNALMDVYAKCGEIENSVKLFTGSTEKNEVAWNTIIV 381
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
G G +A F +++ + P E T+S++L A + GR+I +
Sbjct: 382 GYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHS 432
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 155/330 (46%), Gaps = 1/330 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D+ +YA + + N D + +H + G D + L+ Y +++A K+F
Sbjct: 2 DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + + V ++ GF+ + ++ +L + R G +++ L+ L L
Sbjct: 62 DEMPLTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLAD 121
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+H + K + +V + L+ Y+ C +++A VF+ ++ D+V+W+ ++ Y+
Sbjct: 122 TCLSVHAYVYKLGHQADAFVGTALIDAYSVCGNVDAARQVFDGIYFKDMVSWTGMVACYA 181
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ + +L F ++ + G + + I++ L + G +HG ++ ++ +
Sbjct: 182 ENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLY 241
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V AL+++Y+K G + Q FE M + ++I ++ +I + +A E F + +
Sbjct: 242 VGIALLELYTKSGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSDKSKEALELFCRMRQSS 301
Query: 403 -LNPDESTFSALLCACCHGGLVNDGREIFT 431
+ P+ TF+++L AC L+N G +I +
Sbjct: 302 VVVPNNFTFASVLQACASLVLLNLGNQIHS 331
>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Cucumis sativus]
Length = 650
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 162/467 (34%), Positives = 245/467 (52%), Gaps = 36/467 (7%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI--DEAIKVFDGVSDPDLVLCNSMISGF 180
++ VH I +GL + S + L+ +K+ + + VF V+ P+ L +MI G+
Sbjct: 58 IKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMIRGY 117
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH------------ 228
A G +S + M R G P +T L + +G+ +H
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177
Query: 229 --------------GF--CLKSSFDSY---DYVS-SVLVSMYARCNCMNSAYHVFNSLFH 268
GF C + FD D VS + L+ YA+ M SA +F+ L
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPL 237
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D+V W+A++TGY+Q G +AL YF+K+ G + D V +A V++A A+ V I
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297
Query: 329 HGYVIQHGFELS--VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
+ GF S V+V SAL+DMYSKCG +VFE M ERN+ +Y+S+ILG +HG
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYAMHG 357
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
+ A + F D+++ + P++ TF +L AC H GLV GR++F +M + +G+ +HY
Sbjct: 358 RAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY 417
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP 506
MV LLG AG LEEA + ++P + V GALL C I+GN D+A+I A++LF+ +P
Sbjct: 418 ACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELFKLEP 477
Query: 507 RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
++LSN YA GRW++V KLR I + G +K G SW G +
Sbjct: 478 NGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFEGKN 524
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 184/406 (45%), Gaps = 38/406 (9%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSAR--ILFDKTPQRSVFLWNSII 76
S+ K++HA + + L + + TKL+R+ +V + ++F + + FLW ++I
Sbjct: 55 FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-- 134
R YAL +++ + + + R + P +FT++ + +AC ++ + VH I+ G
Sbjct: 115 RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGF 174
Query: 135 -------------------LG-----------RDSITSSALVTAYSKLSLIDEAIKVFDG 164
LG RD ++ + L+ AY+K ++ A +FD
Sbjct: 175 ASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDD 234
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ D+V +M++G+A G ++L+ F M +G DE TL G+IS + +
Sbjct: 235 LPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHA 294
Query: 225 QGIHGFCLKSSFDSYD--YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
I +S F V S L+ MY++C + AY VF + ++ ++S++I GY+
Sbjct: 295 NWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSYSSMILGYA 354
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSV 341
G AL F + + + V +L+A + + V G + + + G S
Sbjct: 355 MHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSP 414
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHG 386
+ +VD+ + G L + + +TM E N + +++ +HG
Sbjct: 415 DHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHG 460
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 120/259 (46%), Gaps = 12/259 (4%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD T+L+ YA + SA LFD P + + W +++ YA R +A F+ +
Sbjct: 207 RDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKM 266
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR--DSITSSALVTAYSKLS 153
++ D T A + AC++ + ++ A SG G + + SAL+ YSK
Sbjct: 267 QDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCG 326
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
DEA KVF+ + + ++ +SMI G+A G +LQLF ML+ P++ T +G++S
Sbjct: 327 SPDEAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILS 386
Query: 214 GLWEPSLLSVGQGIHG-----FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-F 267
L+ G+ + F + S D Y + +V + R C+ A + ++
Sbjct: 387 ACSHAGLVEQGRQLFAKMEKFFGVAPSPDHY----ACMVDLLGRAGCLEEALDLVKTMPM 442
Query: 268 HPDLVTWSALITGYSQQGD 286
P+ W AL+ G+
Sbjct: 443 EPNGGVWGALLGACRIHGN 461
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH--VFNSLFH 268
L+S L + +L S + +H +++ YV + L+ M + + +Y VF + +
Sbjct: 45 LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNY 104
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
P+ W+A+I GY+ QG ++ ++ ++ G +++ A + N+ G +
Sbjct: 105 PNPFLWTAMIRGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQV 164
Query: 329 HGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL------- 380
H I GF + V ++++D+Y KCG+LG +VF+ MSER+++++ +I+
Sbjct: 165 HAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGD 224
Query: 381 ------------------------GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
G +G +A E+F+ + + G+ DE T + ++ A
Sbjct: 225 MESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISA 284
Query: 417 CCHGGLVNDG---REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
C G V R+I R +G ++ + G+ +EAY
Sbjct: 285 CAQLGAVKHANWIRDIAER--SGFGPSGNVVVGSALIDMYSKCGSPDEAY 332
>gi|359492768|ref|XP_002279149.2| PREDICTED: pentatricopeptide repeat-containing protein At1g43980,
mitochondrial-like [Vitis vinifera]
Length = 665
Score = 268 bits (684), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/501 (29%), Positives = 266/501 (53%), Gaps = 12/501 (2%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYAC---- 109
L AR +FD+ P+R V WN++I Y F+DA F + + ++P FTY+
Sbjct: 119 LERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSF 178
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLG-RDSITSSALVTAYSKLSLIDEAIKVFDGVSDP 168
++ AC +H I +G+ + + ++L+ Y K ++D A VF + +
Sbjct: 179 VSSACRGKQ-------IHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEEL 231
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
D+ NS+I G+ + +L+ F M +G +PD++T+ +I+ L G+ I
Sbjct: 232 DITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIF 291
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
C++ F S VSS + ++++CN + + VF ++ D V +A+I+ Y+ G
Sbjct: 292 ALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGE 351
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
AL F + + ++ VL+A + V G+ IH V++ G E V+V+S+LV
Sbjct: 352 NALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLV 411
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+MY+K G + ++ F + R++I++N++I+GL +G +A E F++++ G PDE
Sbjct: 412 EMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEI 471
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
T + +L AC GGLV++G IF+ M +EYG+ EHY +V ++ G L+EA +
Sbjct: 472 TLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVEL 531
Query: 469 LPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDV 528
+P + G+LL C IYG+ E VA ++ E +P+ ++L+ Y GRW+ +
Sbjct: 532 MPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESL 591
Query: 529 MKLRDDIVDNGLRKEAGVSWV 549
+++R + + G+RK G SW+
Sbjct: 592 VRVRRAMKEKGVRKVIGCSWI 612
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 6/354 (1%)
Query: 18 SLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
S R K++HA ++ L + L+ +Y V+ A +F + + WNS+I
Sbjct: 181 SACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDITSWNSLI 240
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ + N A F + PD FT + + CS DL + I G
Sbjct: 241 WSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFL 300
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+SI SSA + +SK + ++++++VF+ + D VLCN+MIS +A GF + +LQLF
Sbjct: 301 SNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLT 360
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQG--IHGFCLKSSFDSYDYVSSVLVSMYARCN 254
LR P E+TL ++S + LL V QG IH +KS +S V+S LV MYA+
Sbjct: 361 LRENLRPTEFTLSIVLSAV--SILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFG 418
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++SA F + DL++W+ +I G + G KAL F++L + G D + +A VL
Sbjct: 419 LIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLL 478
Query: 315 AAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
A V G ++ ++G ++ + +VDM S+ G L + + E M
Sbjct: 479 ACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELM 532
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 146/296 (49%), Gaps = 4/296 (1%)
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ ++ I+ + + A+ + ++ A VFD + D+V N+MISG+ G +D + + F
Sbjct: 99 IDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFS 158
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDYVSSVLVSMYARC 253
M + G P +T L+S + S G+ IH +++ D S V + L+ MY +
Sbjct: 159 EMQKAGIRPSGFTYSTLLSFV---SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKF 215
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
++ A+ VF ++ D+ +W++LI + G AL F + G D +++V+
Sbjct: 216 GVVDYAFGVFITMEELDITSWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVI 275
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ ++ G I I+ GF + +VSSA +D++SKC L ++VFE + + + +
Sbjct: 276 TVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSV 335
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
N++I HGF A + F + + L P E T S +L A V+ G +I
Sbjct: 336 LCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQI 391
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 147/326 (45%), Gaps = 14/326 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ + + Q L + +++ AL + L + ++ + L++ N L + +F++ Q
Sbjct: 274 VITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWD 333
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
L N++I +YA +A LF LR L+P FT + + A S + +H
Sbjct: 334 SVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHS 393
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SGL D I +S+LV Y+K LID A+K F + DL+ N+MI G A+ G K
Sbjct: 394 LVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSK 453
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--- 245
+L++F +L G PDE TL G++ L+ G I S Y + ++
Sbjct: 454 ALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSI----FSSMEKEYGVIPAIEHY 509
Query: 246 --LVSMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYG-KALYYFRKLNMQG 301
+V M +R + A + + H P + W +L+ GD R + ++
Sbjct: 510 ACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEP 569
Query: 302 KKADPVLIASVLAAAAKSANVWPGAV 327
+ + P L VLA A + W V
Sbjct: 570 QSSLPYL---VLAQAYEMRGRWESLV 592
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+H +I+ GF + + +D+YS+ G ++VFE + ++N+I++N + L F
Sbjct: 59 VHAQLIKVGFNTHTFLGNRCLDLYSQLGTGNDSLRVFEDIIDKNLISWN-----IFLKAF 113
Query: 388 T-YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+ E RD+ ++ D +++ ++ GL +D F+ M +
Sbjct: 114 VRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQK 162
>gi|356514095|ref|XP_003525742.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Glycine max]
Length = 700
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 265/536 (49%), Gaps = 2/536 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q L K +H + K + D F + L+ LY+ + A +F + P++ V LW SII
Sbjct: 119 QKLELGKMIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSII 178
Query: 77 RAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
Y A + F ++ Q+ PD T AC++ SD R VHG G
Sbjct: 179 TGYEQNGSPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGF 238
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+++++ Y K I A +F + D++ +SM++ +A G +L LF+
Sbjct: 239 DTKLCLANSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNE 298
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ + T++ + S L G+ IH + F+ VS+ L+ MY +C
Sbjct: 299 MIDKRIELNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFS 358
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+A +FN + D+V+W+ L +GY++ G K+L F + G + D + + +LAA
Sbjct: 359 PKNAIDLFNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAA 418
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+++ V +H +V + GF+ + + ++L+++Y+KC + +VF+ M ++++T+
Sbjct: 419 SSELGIVQQALCLHAFVSKSGFDNNEFIGASLIELYAKCSSIDNANKVFKGMRRKDVVTW 478
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+S+I G HG +A + F + + P++ TF ++L AC H GL+ +G ++F M
Sbjct: 479 SSIIAAYGFHGQGEEALKLFYQMSNHSDVKPNDVTFVSILSACSHAGLIEEGIKMFHVMV 538
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
EY + TEHY MV LLG G L++A I +P P V GALL C I+ N +
Sbjct: 539 NEYQLMPNTEHYGIMVDLLGRMGELDKALDMINEMPMQAGPHVWGALLGACRIHQNIKIG 598
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E+ A LF DP Y +LSN Y D W D KLR I +N +K G S V
Sbjct: 599 ELAALNLFLLDPNHAGYYTLLSNIYCVDKNWHDAAKLRTLIKENRFKKIVGQSMVE 654
Score = 208 bits (529), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/423 (29%), Positives = 224/423 (52%), Gaps = 4/423 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+++L ++ S +LH+ K L D F TKL LYA L A LF++TP +
Sbjct: 6 LLVKLLETCCSKISIPQLHSQCLKVGLAHDSFVVTKLNVLYARYASLCHAHKLFEETPCK 65
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNL---LRTQLKPDNFTYACITRACSENSDLPGLR 124
+V+LWN+++R+Y L ++ + SLF + T+ +PDN+T + ++CS L +
Sbjct: 66 TVYLWNALLRSYFLEGKWVETLSLFHQMNADAITEERPDNYTVSIALKSCSGLQKLELGK 125
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG + D SAL+ YSK +++A+KVF D+VL S+I+G+ G
Sbjct: 126 MIHGFLKKKKIDNDMFVGSALIELYSKCGQMNDAVKVFTEYPKQDVVLWTSIITGYEQNG 185
Query: 185 FWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+ +L F M+ L + +PD TLV S + S ++G+ +HGF + FD+ ++
Sbjct: 186 SPELALAFFSRMVVLEQVSPDPVTLVSAASACAQLSDFNLGRSVHGFVKRRGFDTKLCLA 245
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ ++++Y + + SA ++F + + D+++WS+++ Y+ G AL F ++ + +
Sbjct: 246 NSILNLYGKTGSIRSAANLFREMPYKDIISWSSMVACYADNGAETNALNLFNEMIDKRIE 305
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ V + S L A A S+N+ G IH + +GFEL + VS+AL+DMY KC I +
Sbjct: 306 LNRVTVISALRACASSSNLEEGKHIHKLAVNYGFELDITVSTALMDMYMKCFSPKNAIDL 365
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F M +++++++ + G G +++ F +++ G PD +L A G+V
Sbjct: 366 FNRMPKKDVVSWAVLFSGYAEIGMAHKSLGVFCNMLSYGTRPDAIALVKILAASSELGIV 425
Query: 424 NDG 426
Sbjct: 426 QQA 428
>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Glycine max]
Length = 934
Score = 267 bits (683), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 167/542 (30%), Positives = 276/542 (50%), Gaps = 4/542 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + S Q+L + LH +V K+ L + L+ +Y+ A +F K +R
Sbjct: 267 LLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERD 326
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WNS++ ++ + A L +L+T+ + T+ AC +L L+ VH
Sbjct: 327 LISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACY---NLETLKIVHA 383
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I+ GL + I +ALVT Y K + A +V + D D V N++I G A +
Sbjct: 384 FVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNA 443
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ F+ + G + T+V L+S P LL G IH + + F+ +V S L+
Sbjct: 444 AIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPIHAHIVVAGFELETFVQSSLI 503
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MYA+C +N++ ++F+ L + + TW+A+++ + G +AL K+ G D
Sbjct: 504 TMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEEALKLIIKMRNDGIHLDQF 563
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ A + G +H +I+HGFE + V +A +DMY KCG + ++
Sbjct: 564 SFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMDMYGKCGEIDDVFRILPQP 623
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
R+ ++N +I L HGF QA E F ++++ GL PD TF +LL AC HGGLV++G
Sbjct: 624 RSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVTFVSLLSACSHGGLVDEGL 683
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F+ M+ ++G+ EH + ++ LLG AG L EA +FI +P P V +LL+ C I
Sbjct: 684 AYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKMPVPPTDLVWRSLLAACKI 743
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+GN +LA A +LFE D + V+ SN A RW DV +R + + ++K+ S
Sbjct: 744 HGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVENVRKQMESHNIKKKPACS 803
Query: 548 WV 549
WV
Sbjct: 804 WV 805
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 183/372 (49%), Gaps = 1/372 (0%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y+ + A+ +FDK P+R+ WN+++ + + A F ++L ++P ++
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 107 YACITRACSENSDLPGLRF-VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
A + AC + + F VH I GL D ++L+ Y + E VF +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+P++V S++ G+A+ G + + ++ + R G +E + +I +G
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGY 180
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
+ G +KS D+ V++ L+SM+ C+ + A VF+ + D ++W+++IT G
Sbjct: 181 QVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNG 240
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
K+L YF ++ K D + I+++L + N+ G +HG V++ G E +V V +
Sbjct: 241 HCEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCN 300
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
+L+ MYS+ G VF M ER++I++NS++ +G +A E ++++
Sbjct: 301 SLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKAT 360
Query: 406 DESTFSALLCAC 417
+ TF+ L AC
Sbjct: 361 NYVTFTTALSAC 372
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/393 (26%), Positives = 187/393 (47%), Gaps = 3/393 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA V K L D F T L+ Y + ++F + + ++ W S++ YA
Sbjct: 80 QVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIEEPNIVSWTSLMVGYAYNG 139
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ S+++ L R + + A + R+C D V G I SGL ++
Sbjct: 140 CVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSVAN 199
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L++ + I+EA VFD + + D + NS+I+ H G +KSL+ F M
Sbjct: 200 SLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFSQMRYTHAKT 259
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D T+ L+ L G+G+HG +KS +S V + L+SMY++ A VF
Sbjct: 260 DYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQAGKSEDAEFVF 319
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + DL++W++++ + G+Y +AL ++ K + V + L+A N+
Sbjct: 320 HKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSAC---YNLE 376
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
++H +VI G ++++ +ALV MY K G + +V + M +R+ +T+N++I G
Sbjct: 377 TLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDRDEVTWNALIGGHA 436
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ A E F + E+G+ + T LL A
Sbjct: 437 DNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 159/358 (44%), Gaps = 34/358 (9%)
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
YSK I+ A VFD + + + N+++SGF G++ K++Q F ML G P Y
Sbjct: 2 YSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVA 61
Query: 209 VGLISGLWEPSLLSVGQ-GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
L++ ++ G +H +K +V + L+ Y + VF +
Sbjct: 62 ASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEIE 121
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
P++V+W++L+ GY+ G + + +R+L G + +A+V+ + + G
Sbjct: 122 EPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQ 181
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
+ G VI+ G + +V V+++L+ M+ C + VF+ M ER+ I++NS+I +G
Sbjct: 182 VLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGH 241
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
++ E+F + D T SALL C + GR + +G+ K+
Sbjct: 242 CEKSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGL-------HGMVVKS---- 290
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEND 505
GL N+ V +LLS G S+ AE V H++ E D
Sbjct: 291 ------GLESNV----------------CVCNSLLSMYSQAGKSEDAEFVFHKMRERD 326
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 110/217 (50%), Gaps = 6/217 (2%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++ + A HVF+ + + +W+ L++G+ + G Y KA+ +F + G + +
Sbjct: 1 MYSKFGSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYV 60
Query: 309 IASVLAAAAKSANVWPGAV-IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
AS++ A +S + GA +H +VI+ G V V ++L+ Y G++ VF+ +
Sbjct: 61 AASLVTACDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI 120
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND-- 425
E NI+++ S+++G +G + +R + G+ +E+ + ++ +C G LV+
Sbjct: 121 EEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSC--GVLVDKML 178
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
G ++ + + G+ ++ + G ++EEA
Sbjct: 179 GYQVLGSVIKS-GLDTTVSVANSLISMFGNCDSIEEA 214
>gi|297800128|ref|XP_002867948.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297313784|gb|EFH44207.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 919
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 171/511 (33%), Positives = 266/511 (52%), Gaps = 26/511 (5%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLR--TQLK 101
++ +Y + A LF T R + WNS+I A+A +AK+LF+ ++ T K
Sbjct: 425 VIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSMISAFAQNGFTQEAKNLFREVVSEYTCSK 484
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
T I +C + L + VH + LG L +A+ L +I E
Sbjct: 485 FSLSTVLAILTSCDSSDSLIFGKSVH--CWLQKLGD-------LTSAFLLLEMIFET--- 532
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSL 220
DL NS+I G A G +SL+ F M R GK D TL+G IS L
Sbjct: 533 ------RDLTSWNSVIYGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLRL 586
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ G+ +HG +KS + + + L++MY RC SA VF + P+L +W+ +I+
Sbjct: 587 VLQGRCLHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVFGLISDPNLCSWNCVISA 646
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
SQ + FR L ++ + + +L+A+ + + G H ++I+ GF+ +
Sbjct: 647 LSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQAN 703
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII- 399
VS+ALVDMYS CG L G++VF ++I +NSVI G HG +A E F+++
Sbjct: 704 PFVSAALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYGFHGMGEKAMELFKEMSS 763
Query: 400 -EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
G+ P++STF +LL AC H G +N+G + +M E++G++ TEH + +V +LG AG
Sbjct: 764 GNSGMEPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKPVTEHRVCIVDMLGRAGK 823
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
L+EAY FI + +P V GALLS C+ +G++ L VA LFE +P +Y + L+NT
Sbjct: 824 LKEAYEFIIGIGEPQKAGVWGALLSACNYHGDTKLGTEVAEVLFEMEPDNASYYISLANT 883
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y G WD+ ++LR + DN L+K G S +
Sbjct: 884 YVGLGGWDEAVRLRKIVEDNALKKLPGYSVI 914
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 186/383 (48%), Gaps = 4/383 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H K L+D ++KL+ +Y L S+ LF + ++ V +WNS+I
Sbjct: 97 RSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEKDVIVWNSMITCLNQN 156
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R+ A LF ++ + D+ T A S VH AI +GL DS
Sbjct: 157 GRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALSSLHLSKKCPMVHCLAIETGLVSDSSLC 216
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K + A VF + D+V N++++ G+ SL F M+ G+
Sbjct: 217 NALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPRNSLIYFKSMIGSGQE 276
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYARCNCMNSAY 260
D T +IS L +G+ +HG +KS + +VS + ++SMY++C + +A
Sbjct: 277 ADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANSIISMYSKCGDIEAAE 336
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKS 319
VF L D+++W+A++ G S G + +A +++ K + D + S+ +
Sbjct: 337 TVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDKIQPDISTVVSITSICGDF 396
Query: 320 ANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
G IHGY ++ + + V ++++DMY KCG +F+T + R+++++NS+
Sbjct: 397 CLSREGRAIHGYTVRREMQSRALEVINSVIDMYGKCGLTTQAEFLFKTTTHRDLVSWNSM 456
Query: 379 ILGLGLHGFTYQAFEFFRDIIEK 401
I +GFT +A FR+++ +
Sbjct: 457 ISAFAQNGFTQEAKNLFREVVSE 479
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 193/385 (50%), Gaps = 35/385 (9%)
Query: 50 LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLF-KNLLRTQLKPDNFTYA 108
L+ V PS LFD+ P+R +R +A +F +++LR+ +
Sbjct: 51 LSPVTPSVYNLFDEMPKRD--------------NRTVEASFMFLRDVLRSFMMRIE---- 92
Query: 109 CITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP 168
++ P R +H A+ G +D TSS L+T Y + + ++ +F + +
Sbjct: 93 ---------TETP--RSIHCFALKCGFLQDLATSSKLLTIYGRTGDLVSSLGLFGELKEK 141
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
D+++ NSMI+ G + ++ LF M+ G D TL+ +S L L +H
Sbjct: 142 DVIVWNSMITCLNQNGRYIAAVGLFVEMIHKGNEFDSTTLLLAVSALSSLHLSKKCPMVH 201
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
+++ S + + L+++YA+ ++SA VF + H D+V+W+ ++T G
Sbjct: 202 CLAIETGLVSDSSLCNALMNLYAKGEDLSSAECVFTHMEHRDIVSWNTIMTKCLANGYPR 261
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF--ELSVMVSSA 346
+L YF+ + G++AD V + V++A + + G +HG VI+ G+ E V V+++
Sbjct: 262 NSLIYFKSMIGSGQEADNVTFSCVISACSCLEELPLGESLHGLVIKSGYSPEAHVSVANS 321
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI--IEKGLN 404
++ MYSKCG + VFE + +++I++N+++ GL +G +AF +++ ++K +
Sbjct: 322 IISMYSKCGDIEAAETVFEELLCKDVISWNAILNGLSANGMFEEAFGILKEMQSVDK-IQ 380
Query: 405 PDESTFSALLCACCHGGLVNDGREI 429
PD ST ++ C L +GR I
Sbjct: 381 PDISTVVSITSICGDFCLSREGRAI 405
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 17/271 (6%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH L K+ D L+ +Y SA +F ++ WN +I A +
Sbjct: 593 LHGLAIKSLRELDTQLQNTLITMYGRCKDTESAVKVFGLISDPNLCSWNCVISALSQNKA 652
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ LF+NL +L+P+ T+ + A ++ S G++ H I G + S+
Sbjct: 653 GREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQ-AHCHLIRRGFQANPFVSA 708
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML--RLGK 201
ALV YS +++ +KVF + NS+IS + G +K+++LF M G
Sbjct: 709 ALVDMYSSCGMLETGMKVFRNSGVKSISAWNSVISAYGFHGMGEKAMELFKEMSSGNSGM 768
Query: 202 TPDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
P++ T + L+S ++ G Q F +K + +V M R +
Sbjct: 769 EPNKSTFISLLSACSHSGFINEGLRYYNQMEEKFGVKPVTEH----RVCIVDMLGRAGKL 824
Query: 257 NSAYHVFNSLFHPDLV-TWSALITGYSQQGD 286
AY + P W AL++ + GD
Sbjct: 825 KEAYEFIIGIGEPQKAGVWGALLSACNYHGD 855
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 5/163 (3%)
Query: 12 LSKSHQ--SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
LS S Q S S + H + + +PF + LV +Y+ +L + +F + +S+
Sbjct: 676 LSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVKSI 735
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLL--RTQLKPDNFTYACITRACSENSDL-PGLRFV 126
WNS+I AY A LFK + + ++P+ T+ + ACS + + GLR+
Sbjct: 736 SAWNSVISAYGFHGMGEKAMELFKEMSSGNSGMEPNKSTFISLLSACSHSGFINEGLRYY 795
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ G+ + +V + + EA + G+ +P
Sbjct: 796 NQMEEKFGVKPVTEHRVCIVDMLGRAGKLKEAYEFIIGIGEPQ 838
>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 162/545 (29%), Positives = 265/545 (48%), Gaps = 66/545 (12%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL- 95
D F +L+ LYA + L AR LFDK +R VF WN+++ AY+ + D +++F +
Sbjct: 57 DTFLQNRLLHLYAKSGNLSDARDLFDKMSRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMS 116
Query: 96 ---------------------------LRTQ---LKPDNFTYACITRACSENSDLPGLRF 125
+R Q + ++T+ + ACS+ D+ +
Sbjct: 117 VHDAVSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQ 176
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG + + LG +AL Y+K +D+A +FD + + ++V NSMISG+ G
Sbjct: 177 IHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMVNKNVVSWNSMISGYLQNGQ 236
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ +LF M G PD+ T+ ++S
Sbjct: 237 PETCTKLFCEMQSSGLMPDQVTISNILSA------------------------------- 265
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
Y +C ++ A F + D V W+ ++ G +Q G AL FR++ ++ + D
Sbjct: 266 ----YFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGKEEDALLLFREMLLENVRPD 321
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
I+SV+++ A+ A++ G +HG + G + ++VSSALVDMYSKCG VF+
Sbjct: 322 NFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIVFK 381
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M RN+I++NS+ILG +G +A + +++ + L PD TF +L AC H GLV
Sbjct: 382 RMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLVER 441
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G+ F +++ +G+ +HY M+ LLG AG +++A I S+ + + LLS C
Sbjct: 442 GQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVC 501
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I + + E+ A LFE DP +MLSN YA GRW DV +R + +N ++K A
Sbjct: 502 RINCDVNNGEMAARHLFELDPHNAGPYIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAA 561
Query: 546 VSWVS 550
SW+
Sbjct: 562 YSWIE 566
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 164/379 (43%), Gaps = 43/379 (11%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H VL + R K++H + SL F L +YA L AR LFD+
Sbjct: 158 HVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGALDQARWLFDRMV 217
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
++V WNS+I Y + LF + + L P
Sbjct: 218 NKNVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMP----------------------- 254
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
D +T S +++AY + IDEA K F + + D V +M+ G A G
Sbjct: 255 ------------DQVTISNILSAYFQCGYIDEACKTFREIKEKDKVCWTTMMVGCAQNGK 302
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ +L LF ML PD +T+ ++S + L GQ +HG + D VSS
Sbjct: 303 EEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSA 362
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MY++C A+ VF + ++++W+++I GY+Q G +AL + ++ + K D
Sbjct: 363 LVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPD 422
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQ----HGFELSVMVSSALVDMYSKCGYLGLGI 361
+ VL+A + V G GY HG + S ++++ + GY+ +
Sbjct: 423 NITFVGVLSACMHAGLVERG---QGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAV 479
Query: 362 QVFETMS-ERNIITYNSVI 379
+ ++M+ E N + +++++
Sbjct: 480 DLIKSMTFEPNCLIWSTLL 498
>gi|356521639|ref|XP_003529461.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03380,
mitochondrial-like [Glycine max]
Length = 699
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 290/557 (52%), Gaps = 15/557 (2%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
+ F++ F S+ Q+L+ T H K SL D F T LV YA + A
Sbjct: 134 VLFSIVFKSCAESRDFQTLTIT---HCHFVK-SLPSDSFVLTCLVDAYAKFARVDEATRA 189
Query: 61 FDKTPQRS-VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
FD+ + V W S+I AY + +LF + + + FT + AC++ +
Sbjct: 190 FDEIHENDDVVSWTSMIVAYVQNDCAREGLTLFNRMREAFVDGNEFTVGSLVSACTKLNW 249
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS----DPDLVLCNS 175
L ++VHG I +G+ +S +++L+ Y K I +A KVFD S D DLV +
Sbjct: 250 LHQGKWVHGFVIKNGICVNSYLTTSLLNMYVKCGNIQDACKVFDESSSSSYDRDLVSWTA 309
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
MI G++ G+ +L+LF G P+ T+ L+S + +G+ +HG +K
Sbjct: 310 MIVGYSQRGYPHLALELFKDKKWSGILPNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCG 369
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
D + V + LV MYA+C ++ A VF ++ D+V+W+++I+G+ Q G+ +AL FR
Sbjct: 370 LDDHP-VRNALVDMYAKCGVVSDARCVFEAMLEKDVVSWNSIISGFVQSGEAYEALNLFR 428
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKC 354
++ ++ D V + +L+A A + G +HG ++ G +S + V +AL++ Y+KC
Sbjct: 429 RMGLELFSPDAVTVVGILSACASLGMLHLGCSVHGLALKDGLVVSSIYVGTALLNFYAKC 488
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G VF++M E+N +T+ ++I G G+ G + FRD++E+ + P+E F+ +L
Sbjct: 489 GDARAARMVFDSMGEKNAVTWGAMIGGYGMQGDGNGSLTLFRDMLEELVEPNEVVFTTIL 548
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC H G+V +G +F M E +HY MV +L AGNLEEA FI +P V
Sbjct: 549 AACSHSGMVGEGSRLFNLMCGELNFVPSMKHYACMVDMLARAGNLEEALDFIERMP--VQ 606
Query: 475 PAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
P+VS GA L C ++ +L ++ E P + Y V++SN YA DGRW V ++R
Sbjct: 607 PSVSVFGAFLHGCGLHSRFELGGAAIKKMLELHPDEACYYVLVSNLYASDGRWGMVKQVR 666
Query: 533 DDIVDNGLRKEAGVSWV 549
+ I GL K G S V
Sbjct: 667 EMIKQRGLNKVPGCSSV 683
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 222/423 (52%), Gaps = 11/423 (2%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
LS+ +L K LHA L D +TKL+ LYA L AR +F+ P R ++
Sbjct: 39 LSRLCTNLPSLKTLHASFLIHGLTNDLLLSTKLLSLYASFGQLRHARKIFNHLPTRDLYC 98
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKP---DNFTYACITRACSENSDLPGLRFVHG 128
+ +IRAY L + SL++ L+R L P D ++ + ++C+E+ D L H
Sbjct: 99 FKVMIRAYFLNDTPSGVVSLYR-LMRLSLHPTPHDYVLFSIVFKSCAESRDFQTLTITH- 156
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV-SDPDLVLCNSMISGFAHCGFWD 187
V L DS + LV AY+K + +DEA + FD + + D+V SMI +
Sbjct: 157 CHFVKSLPSDSFVLTCLVDAYAKFARVDEATRAFDEIHENDDVVSWTSMIVAYVQNDCAR 216
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ L LF+ M +E+T+ L+S + + L G+ +HGF +K+ Y+++ L+
Sbjct: 217 EGLTLFNRMREAFVDGNEFTVGSLVSACTKLNWLHQGKWVHGFVIKNGICVNSYLTTSLL 276
Query: 248 SMYARCNCMNSAYHVFN----SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+MY +C + A VF+ S + DLV+W+A+I GYSQ+G AL F+ G
Sbjct: 277 NMYVKCGNIQDACKVFDESSSSSYDRDLVSWTAMIVGYSQRGYPHLALELFKDKKWSGIL 336
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+ V ++S+L++ A+ N G ++HG ++ G + V +ALVDMY+KCG + V
Sbjct: 337 PNSVTVSSLLSSCAQLGNSVMGKLLHGLAVKCGLD-DHPVRNALVDMYAKCGVVSDARCV 395
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
FE M E++++++NS+I G G Y+A FR + + +PD T +L AC G++
Sbjct: 396 FEAMLEKDVVSWNSIISGFVQSGEAYEALNLFRRMGLELFSPDAVTVVGILSACASLGML 455
Query: 424 NDG 426
+ G
Sbjct: 456 HLG 458
>gi|357450559|ref|XP_003595556.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355484604|gb|AES65807.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 1040
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 162/527 (30%), Positives = 276/527 (52%), Gaps = 7/527 (1%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
H V K + L+ LY N L ++ + WN++I + +
Sbjct: 143 HGHVVKLGMDAFDLVGNTLIELYGFLN----GNGLVERKSVTKLNFWNNLIYEAYESGKI 198
Query: 86 NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSAL 145
++ LF + ++P++ T + RA E++ L + +H + S L ++ ++AL
Sbjct: 199 VESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTVNTAL 258
Query: 146 VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDE 205
++ Y+KL + +A +F+ + + D+V+ N MIS ++ G +SL+L M+R G PD
Sbjct: 259 LSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDM 318
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNS 265
+T + IS + + + G+ +H +++ D V + LV MY+ C +NSA +F
Sbjct: 319 FTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGL 378
Query: 266 LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG 325
+ +V+WSA+I GY+ + +AL F ++ + G K D V++ ++L A AK +
Sbjct: 379 IKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYV 438
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF--ETMSERNIITYNSVILGLG 383
+HGY ++ + + ++L++ Y+KCG + + ++F E S ++I+ +NS+I
Sbjct: 439 GYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYS 498
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
HG +Q FE + I + PD TF +L AC + GLV+ G+EIF M + YG Q
Sbjct: 499 NHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSK 558
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG-NSDLAEIVAHQLF 502
EH MV LLG AG ++EA I + D V G LLS C ++G +D AE+ A +L
Sbjct: 559 EHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLI 618
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ +P A V+LSN +A G+WD K+R + D GL+K G SWV
Sbjct: 619 KMEPENPANYVLLSNIFAAAGKWDKFAKMRSFLRDRGLKKTPGCSWV 665
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 203/455 (44%), Gaps = 44/455 (9%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + SL K LH+LV ++L ++ T L+ +YA + L AR++F+K P++
Sbjct: 223 LLRATVESNSLKIGKVLHSLVVASNLCKELTVNTALLSMYAKLDSLKDARLMFEKMPEKD 282
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +WN +I Y+ + ++ L ++R+ ++PD FT + ++ + + +H
Sbjct: 283 VVVWNIMISVYSGSGCPKESLELVYCMVRSGIRPDMFTAIPAISSITKLKSIEWGKQLHA 342
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I +G ++LV YS + ++ A K+F + D +V ++MI G+A +
Sbjct: 343 QVIRNGSDYQVSVHNSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAMHDNCLE 402
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L LF M G D ++ ++ + L +HG+ LK++ DS + + L++
Sbjct: 403 ALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLN 462
Query: 249 MYARCNCMNSAYHVFNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
YA+C C+ A +FN D+V W+++IT YS G++ + + ++ + K D
Sbjct: 463 SYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDH 522
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V +L A S V G I ++ +GF+ S ++ +VD+ + G + ++ E
Sbjct: 523 VTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIE 582
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
T LN D + LL AC GL D
Sbjct: 583 T----------------------------------NQLNSDARVYGPLLSACKMHGLETD 608
Query: 426 GREIFTRMTEEYGIQAKTE---HYIYMVKLLGLAG 457
F + E I+ + E +Y+ + + AG
Sbjct: 609 ----FAELAAEKLIKMEPENPANYVLLSNIFAAAG 639
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 181/406 (44%), Gaps = 8/406 (1%)
Query: 2 FFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
FFN +L L Q L +++HA L ++ ++KL+ Y+ +L + +F
Sbjct: 20 FFNTTSSILNLCTKPQYL---QQIHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIF 76
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
T ++N+ +R + + L+K +++ + PD + ++
Sbjct: 77 SFTENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEK 136
Query: 122 GL-RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
GL HG + G+ + + L+ Y L+ + + S L N++I
Sbjct: 137 GLIMMAHGHVVKLGMDAFDLVGNTLIELYGFLN----GNGLVERKSVTKLNFWNNLIYEA 192
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G +S +LF M P+ TL+ L+ E + L +G+ +H + S+
Sbjct: 193 YESGKIVESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKEL 252
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V++ L+SMYA+ + + A +F + D+V W+ +I+ YS G ++L +
Sbjct: 253 TVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRS 312
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + D +++ K ++ G +H VI++G + V V ++LVDMYS C L
Sbjct: 313 GIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSA 372
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
++F + +R +++++++I G +H +A F ++ G D
Sbjct: 373 RKIFGLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVD 418
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IH HG + +SS L+D YS G L ++F + I YN+ + L + G
Sbjct: 40 IHARFFLHGLHQNSSLSSKLIDSYSNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGE 99
Query: 388 TYQAFEFFRDIIEKGLNPDES-TFSAL-----------LCACCHGGLVNDGREIF 430
+ ++++++K + PDE FS L L HG +V G + F
Sbjct: 100 YEKTLFLYKEMVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHVVKLGMDAF 154
>gi|242051244|ref|XP_002463366.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
gi|241926743|gb|EER99887.1| hypothetical protein SORBIDRAFT_02g042450 [Sorghum bicolor]
Length = 745
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 168/550 (30%), Positives = 280/550 (50%), Gaps = 18/550 (3%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+ L L+ ++LHAL ++A + D F LV Y+ ++ +AR +F++ P R
Sbjct: 153 VTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGNALVTAYSRGGLMDAARKVFEEMPAR 212
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRT----QLKPDNFTYACITRACSENSDLPGL 123
+ WN+++ LA + + + LR ++PD + + AC L
Sbjct: 213 DLVSWNALV--CGLAQDGECSAEVIRVFLRMLKQGDVRPDRISVCSVIPACGAEGKLELG 270
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R +HG A+ G+ ++ LV Y K A ++F+ + + D++ +++S
Sbjct: 271 RQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVISWTTVMSMDG-- 328
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+ ++ LF+ M R G P+E T V ++S + GQ IH CLK+S +
Sbjct: 329 ---EDAVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCPAREGQMIHAVCLKTSLSDKAAAA 385
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L++MYA+ M+ A +F+ + H +++ W+ALI+GY+Q AL F + M+ K
Sbjct: 386 NSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISGYAQNEMCQDALEAFLAM-MKIMK 444
Query: 304 ADPVLIASVLAA--AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ AS+L+A A ++ ++ G + H ++ G S VS AL+DMY+K G L
Sbjct: 445 PNETTFASILSAVTAVETVSMAYGQMYHCQALKLGLGASEYVSGALIDMYAKRGSLEESW 504
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ F R++I + ++I HG F D++ G+ PD ++L AC + G
Sbjct: 505 KAFGETVHRSLIAWTAIISANSKHGNYDAVVSLFNDMVGSGVAPDGVVLLSVLTACRYSG 564
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG-- 479
V+ GREIF M ++G + EHY +V +LG AG LEEA + +P P+VS
Sbjct: 565 FVSLGREIFDSMAAKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPS--GPSVSALQ 622
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
+LL C I+GN+D+ E VA L E +P + V+LSN YAE G W V ++R + + G
Sbjct: 623 SLLGACRIHGNTDVGERVASVLTETEPTESGAYVLLSNIYAEKGDWGAVARVRRQMRERG 682
Query: 540 LRKEAGVSWV 549
++KE G SWV
Sbjct: 683 VKKEVGFSWV 692
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 184/395 (46%), Gaps = 12/395 (3%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
HAL + L L YA N P+A +F R +N+I+ A
Sbjct: 71 FHALAVASGLAAFAPVTNSLAARYAKGNSFPAAARVFAAARSRDTRSYNTILSATP---D 127
Query: 85 FNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+DA + +LRT ++PD T+ + + +R +H A +G+ D +
Sbjct: 128 PDDALAFAARMLRTGDVRPDAVTFTVTLSLAAGRGEAHLVRQLHALASRAGIATDVFVGN 187
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS-LQLFDWMLRLGKT 202
ALVTAYS+ L+D A KVF+ + DLV N+++ G A G +++F ML+ G
Sbjct: 188 ALVTAYSRGGLMDAARKVFEEMPARDLVSWNALVCGLAQDGECSAEVIRVFLRMLKQGDV 247
Query: 203 -PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD ++ +I L +G+ IHGF +K + + +++VLV+MY +C A
Sbjct: 248 RPDRISVCSVIPACGAEGKLELGRQIHGFAVKLGVEGHVSIANVLVAMYYKCGTPGCARR 307
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F + D+++W+ ++ S G+ A+ F + G + V ++L++
Sbjct: 308 LFEFMGERDVISWTTVM---SMDGE--DAVSLFNGMRRDGVAPNEVTFVAMLSSMPGDCP 362
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G +IH ++ +++L+ MY+K + +F M II +N++I G
Sbjct: 363 AREGQMIHAVCLKTSLSDKAAAANSLITMYAKLRRMDDARMIFSLMPHSEIIAWNALISG 422
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ A E F ++ K + P+E+TF+++L A
Sbjct: 423 YAQNEMCQDALEAFLAMM-KIMKPNETTFASILSA 456
>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930 [Vitis vinifera]
gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
Length = 743
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 172/611 (28%), Positives = 297/611 (48%), Gaps = 67/611 (10%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
N + +L+L Q+ ++ K+LH L+ K + F + L+ Y L A +FD
Sbjct: 6 NYYASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDH 65
Query: 64 TPQRSVFLWNSIIRAYA-------LAHRFN------------------------DAKSLF 92
PQ ++F WN+I+ Y+ + FN DA ++
Sbjct: 66 IPQPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVY 125
Query: 93 KNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
K +L+ + + T++ + CS+ + R ++G + G G D S LV Y+K
Sbjct: 126 KLMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF---------DWMLRL--- 199
L LI +A + FD + + ++V+CN+MI+G CG ++S +LF W + +
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245
Query: 200 -------------------GKTPDEYTLVGLISGLWEPSLLSVGQG--IHGFCLKSSFDS 238
G D++T +++ SLL++G+G IH + +++
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTAC--GSLLALGEGKQIHAYVIRTDHKD 303
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+V S LV MY++C + SA VF + ++++W+A++ GY Q G +A+ F ++
Sbjct: 304 NVFVGSALVDMYSKCRSIKSAETVFKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQ 363
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
G + D + SV+++ A A++ GA H + G + VS+AL+ +Y KCG
Sbjct: 364 RNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCGSTE 423
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
++F M+ R+ +++ +++ G G + F ++ GL PD TF +L AC
Sbjct: 424 NSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACS 483
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
GLV G + F M +E+GI +H ++ LLG AG LEEA +FI ++P D
Sbjct: 484 RAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGW 543
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
LLS C ++G+ ++ + A L +P+ A V+LS+ YA G+WD V +LR + D
Sbjct: 544 ATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDK 603
Query: 539 GLRKEAGVSWV 549
+RKE G SW+
Sbjct: 604 RVRKEPGYSWI 614
>gi|255551485|ref|XP_002516788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543876|gb|EEF45402.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 710
Score = 267 bits (683), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 176/636 (27%), Positives = 288/636 (45%), Gaps = 95/636 (14%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+ H LS+ K++H LV+K+ L + F L+ +Y +L A+ +FD P+
Sbjct: 73 LKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLINMYGKCGLLVDAKSIFDVCPRSDP 132
Query: 70 FLWNSIIRAYALAHR-------------------------------FNDAKSLFKNLLRT 98
+N +I Y + + +N A LFK +
Sbjct: 133 VSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTMIMGFSQNECWNQAVELFKQMRNV 192
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+ P+ T A + A S + R +HG I + S+ L+ Y S + EA
Sbjct: 193 GVVPNEVTIATLVSAYSHFGGIWACRMLHGLVIKMLFEEFVLVSTNLLRMYCVCSSLVEA 252
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWD------------------------------- 187
+FD + + ++V N M++G++ GF D
Sbjct: 253 RALFDEMPEKNIVSWNVMLNGYSKAGFVDSARVVFERIPNKDLVTWGTIIDGYVRVERIN 312
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++L ++ M+ G P++ +V LISG ++ GQ + +K FD YD++ S ++
Sbjct: 313 EALMMYRSMISAGWEPNDVMMVDLISGCGRTMAMTEGQQLLSAVVKMGFDCYDFIQSTII 372
Query: 248 SMYARCNCMNS-------------------------------AYHVFNSLFHPDLVTWSA 276
+YA C +N A +FN + D+ +WS
Sbjct: 373 HLYAACGRINEACLQFRIGSKENVASWNALIAGYVRNRMIDRAMELFNEMPERDVFSWST 432
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+GY+Q AL F K+ G K + V + SVL+A A S + G H YV +
Sbjct: 433 MISGYTQNEQPNLALELFHKMVASGIKPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNS 492
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSER--NIITYNSVILGLGLHGFTYQAFEF 394
+S +S+A++DMY+KCG + ++VF + E+ + +N++I GL +HG + +
Sbjct: 493 ITVSDNLSAAIIDMYAKCGSINNALEVFYEIREKASTVSPWNAIICGLAVHGHANLSLKI 552
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F D+ + + + TF +L ACCH GLV G+ F M E+ I +HY MV LLG
Sbjct: 553 FSDLERRHIKLNAITFIGVLTACCHVGLVESGKRHFMSMKSEHSIDPDIKHYGCMVDLLG 612
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG LEEA I S+P D + G LL+ C +GN D+ E A L +P GA +V+
Sbjct: 613 RAGRLEEAEEMIRSMPMKADVVIWGTLLAACRTHGNVDVGERAAENLARLEPSHGASRVL 672
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
LSN YA+ G+W+D +R + + +++ G S V+
Sbjct: 673 LSNMYADAGKWEDAFLVRRAMQSHRMQRLPGYSGVA 708
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/466 (21%), Positives = 195/466 (41%), Gaps = 86/466 (18%)
Query: 92 FKNLLRTQLKPDNFTYACIT----RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVT 147
+LL + +F Y + + CS++ L + +H SGLG ++ ++L+
Sbjct: 50 LNSLLNPKTGQRHFNYELVLVSALKFCSDHLFLSQGKQIHCLVSKSGLGSNNFIQNSLIN 109
Query: 148 AYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG----------------------- 184
Y K L+ +A +FD D V N MISG+ G
Sbjct: 110 MYGKCGLLVDAKSIFDVCPRSDPVSYNVMISGYVKSGQLDYACELFDEMPVKGCVSYTTM 169
Query: 185 --------FWDKSLQLFDWMLRLGKTPDEYTLVGLIS------GLWEPSLLSVGQGIHGF 230
W+++++LF M +G P+E T+ L+S G+W +L HG
Sbjct: 170 IMGFSQNECWNQAVELFKQMRNVGVVPNEVTIATLVSAYSHFGGIWACRML------HGL 223
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCM-------------------------------NSA 259
+K F+ + VS+ L+ MY C+ + +SA
Sbjct: 224 VIKMLFEEFVLVSTNLLRMYCVCSSLVEARALFDEMPEKNIVSWNVMLNGYSKAGFVDSA 283
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF + + DLVTW +I GY + +AL +R + G + + V++ +++ ++
Sbjct: 284 RVVFERIPNKDLVTWGTIIDGYVRVERINEALMMYRSMISAGWEPNDVMMVDLISGCGRT 343
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G + V++ GF+ + S ++ +Y+ CG + F S+ N+ ++N++I
Sbjct: 344 MAMTEGQQLLSAVVKMGFDCYDFIQSTIIHLYAACGRINEACLQFRIGSKENVASWNALI 403
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G + +A E F ++ E+ D ++S ++ N E+F +M GI
Sbjct: 404 AGYVRNRMIDRAMELFNEMPER----DVFSWSTMISGYTQNEQPNLALELFHKMVAS-GI 458
Query: 440 QAKTEHYIYMVKLLGLAGNLEE---AYSFIWSLPKPVDPAVSGALL 482
+ + ++ + +G L+E A+ ++ + V +S A++
Sbjct: 459 KPNEVTMVSVLSAIATSGTLKEGRWAHEYVHNNSITVSDNLSAAII 504
>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial [Vitis vinifera]
gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
Length = 1048
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 267/537 (49%), Gaps = 6/537 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L ++LH+ + K + + F LV +YA L AR F+ R WN+II
Sbjct: 464 ECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAII 523
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y ++A ++F+ ++ + PD + A I C+ L VH + SGL
Sbjct: 524 VGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQ 583
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S+L+ Y K I+ A VF + +V N++I+G+A + ++ LF M
Sbjct: 584 TCLYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLVE-AIDLFQEM 642
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS--FDSYDYVSSVLVSMYARCN 254
G P E T L+ P L++G+ IH K +D D++ L+ MY
Sbjct: 643 QNEGLNPSEITFASLLDACTGPYKLNLGRQIHCLIQKRGLLYDG-DFLGVSLLVMYMNSQ 701
Query: 255 CMNSAYHVFNSLFHPD-LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
A +F+ +P + W+A+I+G++Q G +AL +++++ + D ASVL
Sbjct: 702 RKTDADILFSEFQYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVL 761
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN-I 372
A + A++ G +IH + G + + SA+VDMY+KCG + +QVFE M +N +
Sbjct: 762 RACSILASLGDGRMIHSLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDV 821
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
I++NS+I+G +G+ A + F ++ + PD+ TF +L AC H G V++GREIF
Sbjct: 822 ISWNSMIVGFAKNGYAENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDI 881
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
M Y I + +H M+ LLG G L+EA FI L + + LL C I+G+
Sbjct: 882 MVHSYKIVPRLDHCACMIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDI 941
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +L E +P + V+LSN YA G WD+V +R + + GLRK G SW+
Sbjct: 942 RGRRAAEKLIELEPENSSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWI 998
Score = 211 bits (536), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 199/376 (52%), Gaps = 1/376 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L A LF + P +V WN +I + +A FKN+ +T +K T + A
Sbjct: 299 LDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSA 358
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
+ L VH AI GL + S+L+ Y+K ++ A KVFD + + +LVL
Sbjct: 359 IASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLW 418
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+M+ G+A G+ K ++LF M G PDE+T ++S L +G+ +H F +K
Sbjct: 419 NAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIK 478
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+F+ +V + LV MYA+C + A F + + D V+W+A+I GY Q+ D +A
Sbjct: 479 HNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNM 538
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
FR++ + G D V +AS+L+ A + G +H ++++ G + + S+L+DMY K
Sbjct: 539 FRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVK 598
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + VF M R++++ N++I G + +A + F+++ +GLNP E TF++L
Sbjct: 599 CGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDLV-EAIDLFQEMQNEGLNPSEITFASL 657
Query: 414 LCACCHGGLVNDGREI 429
L AC +N GR+I
Sbjct: 658 LDACTGPYKLNLGRQI 673
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/450 (25%), Positives = 216/450 (48%), Gaps = 44/450 (9%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+ +K +HA K + +V LYA + A F++ +R + WNS++
Sbjct: 95 QASRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVL 154
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ F +L + P+ FTYA + +C+ D+ + VH G I G
Sbjct: 155 SMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFE 214
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+S +L+ YSK + +A K+FD V DPD V +MI+G+ G +++L++F+ M
Sbjct: 215 FNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDM 274
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+LG PD+ V +I+ VG G +
Sbjct: 275 QKLGLVPDQVAFVTVITA-------CVGLGR----------------------------L 299
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ A +F + + ++V W+ +I+G+ ++G +A+ +F+ + G K+ + SVL+A
Sbjct: 300 DDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAI 359
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + G ++H I+ G +V V S+L++MY+KC + +VF+ + ERN++ +N
Sbjct: 360 ASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERNLVLWN 419
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+++ G +G+ + + F ++ G PDE T++++L AC + GR++ +
Sbjct: 420 AMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS----- 474
Query: 437 YGIQAKTEHYIY----MVKLLGLAGNLEEA 462
+ I+ E+ ++ +V + G LEEA
Sbjct: 475 FIIKHNFEYNLFVENTLVDMYAKCGALEEA 504
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 219/487 (44%), Gaps = 42/487 (8%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H V K + F L+ +Y+ L AR +FD W ++I Y
Sbjct: 202 KQVHCGVIKMGFEFNSFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQV 261
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A +F+++ + L PD + + AC GLGR
Sbjct: 262 GLPEEALKVFEDMQKLGLVPDQVAFVTVITAC------------------VGLGR----- 298
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+D+A +F + + ++V N MISG G +++ F M + G
Sbjct: 299 ------------LDDACDLFVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVK 346
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
TL ++S + L+ G +H +K +S YV S L++MYA+C M +A V
Sbjct: 347 STRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKV 406
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F++L +LV W+A++ GY+Q G K + F ++ G D S+L+A A +
Sbjct: 407 FDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECL 466
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H ++I+H FE ++ V + LVDMY+KCG L Q FE + R+ +++N++I+G
Sbjct: 467 EMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGY 526
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+AF FR +I G+ PDE + +++L C + + G ++ + + G+Q
Sbjct: 527 VQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKS-GLQTC 585
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
++ + G +E A +P +++ + Y +DL E + LF
Sbjct: 586 LYAGSSLIDMYVKCGAIEAARYVFSCMPSRSVVSMNAIIAG----YAQNDLVEAI--DLF 639
Query: 503 ENDPRKG 509
+ +G
Sbjct: 640 QEMQNEG 646
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 203/425 (47%), Gaps = 3/425 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S ++L+ +HA K L + + + L+ +YA + +A+ +FD +R+
Sbjct: 355 VLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDALDERN 414
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ LWN+++ YA + LF + PD FTY I AC+ L R +H
Sbjct: 415 LVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHS 474
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + + LV Y+K ++EA + F+ + + D V N++I G+ D+
Sbjct: 475 FIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDE 534
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ +F M+ G PDE +L ++SG L G+ +H F +KS + Y S L+
Sbjct: 535 AFNMFRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLID 594
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + +A +VF+ + +V+ +A+I GY+Q D +A+ F+++ +G +
Sbjct: 595 MYVKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQN-DLVEAIDLFQEMQNEGLNPSEIT 653
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHG--FELSVMVSSALVDMYSKCGYLGLGIQVFET 366
AS+L A + G IH + + G ++ + S LV + I E
Sbjct: 654 FASLLDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEF 713
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
++ I + ++I G +G + +A + ++++ PD++TF+++L AC + DG
Sbjct: 714 QYPKSTILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDG 773
Query: 427 REIFT 431
R I +
Sbjct: 774 RMIHS 778
>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
mitochondrial-like [Cucumis sativus]
Length = 678
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 150/451 (33%), Positives = 246/451 (54%), Gaps = 1/451 (0%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L+P+ Y+ + C+ L R +H S D + + ++ Y+K ++EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
+FD + D+V +ISG++ G ++L LF ML LG P+E+TL L+
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
G+ +H F LK +D +V S L+ MYAR M A +FNSL ++V+W+ALI
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G++++G+ + F ++ QG + +SV A A S ++ G +H +VI+ G +
Sbjct: 281 GHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQP 340
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ + L+DMY+K G + +VF + +++I+++NS+I G HG +A + F ++
Sbjct: 341 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 400
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
+ + P+E TF ++L AC H GL+++G+ F M +++ I+A+ H++ +V LLG AG L
Sbjct: 401 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRL 459
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
EA FI +P AV GALL C ++ N DL A Q+FE DP V+LSN Y
Sbjct: 460 NEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 519
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A GR D K+R + ++G++KE SWV
Sbjct: 520 ASAGRLSDAAKVRKMMKESGVKKEPACSWVE 550
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/436 (23%), Positives = 199/436 (45%), Gaps = 21/436 (4%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L + + +HA + ++ D ++ +YA L A+ LFDK P + + W +I
Sbjct: 119 RKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLI 178
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + + ++A +LF +L +P+ FT + + +A R +H ++ G
Sbjct: 179 SGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ S+L+ Y++ + + EA +F+ ++ ++V N++I+G A G + ++LF M
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQM 298
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
LR G P +T + + L G+ +H +KS Y+ + L+ MYA+ +
Sbjct: 299 LRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 358
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF L D+V+W+++I+GY+Q G +AL F ++ + + + SVL A
Sbjct: 359 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 418
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ S + G + +H E V +VD+ + G L + E M +
Sbjct: 419 SHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVW 478
Query: 377 SVILG---------LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDG 426
+LG LG+ Y A + F L+P +S LL G ++D
Sbjct: 479 GALLGSCRMHKNMDLGV----YAAEQIFE------LDPHDSGPHVLLSNIYASAGRLSDA 528
Query: 427 REIFTRMTEEYGIQAK 442
++ +M +E G++ +
Sbjct: 529 AKV-RKMMKESGVKKE 543
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 3/313 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S + S ++LHA K + + L+ +YA + A+++F+ ++
Sbjct: 212 LLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN 271
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I +A LF +LR +P +FTY+ + AC+ + L ++VH
Sbjct: 272 VVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHA 331
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I SG + + L+ Y+K I +A KVF + D+V NS+ISG+A G +
Sbjct: 332 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 391
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+LQLF+ ML+ P+E T + +++ LL GQ K ++ +V
Sbjct: 392 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 451
Query: 249 MYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGKKADP 306
+ R +N A + P W AL+ + +Y ++ + + P
Sbjct: 452 LLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQIFELDPHDSGP 511
Query: 307 -VLIASVLAAAAK 318
VL++++ A+A +
Sbjct: 512 HVLLSNIYASAGR 524
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%)
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
LY +N + + L + +L + G IH ++ FE +++ + +++M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
Y+KCG L +F+ M ++++++ +I G G +A F ++ G P+E T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 411 SALLCACCHGGLVNDGREI 429
S+LL A G + GR++
Sbjct: 210 SSLLKASGTGPSDHHGRQL 228
>gi|414884271|tpg|DAA60285.1| TPA: hypothetical protein ZEAMMB73_421255 [Zea mays]
Length = 686
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 157/487 (32%), Positives = 252/487 (51%), Gaps = 35/487 (7%)
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ + PD FTY + RAC+E +DL R VH A +G+ +ALV+ Y+K +
Sbjct: 152 KDAVPPDAFTYPKVLRACAETADLVLGRAVHVRAAAAGMDGHLFFQNALVSMYAKCGDLA 211
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF-------------DW-------- 195
A +VFDG+ + D+V NSMISG+A G W ++++LF W
Sbjct: 212 AARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAEGAEANSVTWNTIAGGYI 271
Query: 196 --------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
M+R G D TLV + L +G+ IHG ++ D
Sbjct: 272 QMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDS 331
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V + +++MYARCN M A +F ++ P LV W+ ++ G++ D A FR++
Sbjct: 332 VVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALLDDAEAASRLFREMVCSD 391
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ + V + + LA A+ AN+ G +H ++I+ GF+ ++ ++L+DMYSK G L +
Sbjct: 392 VQPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQ 451
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
VF+TM +R++I++ S+I G G+ G + FF+ +I+ G+ PD +L AC H G
Sbjct: 452 NVFDTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACSHSG 511
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV++G E+F +M YGI+ + EHY MV L AG LE+A + P P + AL
Sbjct: 512 LVDEGEELFDKMVSSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAAL 571
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
+ CH GN + E A +L E + V+++N YA G W+++ +R + D G+
Sbjct: 572 VGACHEQGNVIIGERSARRLLEMKTENAGHYVLIANMYAAAGCWNELATVRKLMRDMGVM 631
Query: 542 KEAGVSW 548
K G++W
Sbjct: 632 KAPGLAW 638
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 195/462 (42%), Gaps = 78/462 (16%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
F+ LV +YA L +AR +FD R V WNS+I YA + ++ +A LF+ +
Sbjct: 195 FFQNALVSMYAKCGDLAAARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAE 254
Query: 99 QLKPDNFTYACI-----------------------------------TRACSENSDLPGL 123
+ ++ T+ I + ACS L
Sbjct: 255 GAEANSVTWNTIAGGYIQMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLG 314
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +HG A+ +A++T Y++ + ++ A+ +F + P LV N+M++GFA
Sbjct: 315 KEIHGLAVRMQCHEIDSVVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALL 374
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+ + +LF M+ P+ T+V ++ + L GQ +H ++ F Y +
Sbjct: 375 DDAEAASRLFREMVCSDVQPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLW 434
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+ MY++ ++ A +VF+++ D+++++++I GY QG +L +F+++ G
Sbjct: 435 NSLIDMYSKSGRLSVAQNVFDTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIM 494
Query: 304 ADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D +++ +VL+A + S V G + V +G + + S +VD+Y++ G L
Sbjct: 495 PDAIIMVTVLSACSHSGLVDEGEELFDKMVSSYGIKPQMEHYSCMVDLYARAGLL----- 549
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
E +++ + P ST A L CH
Sbjct: 550 ------------------------------EKAEELLNQTPFPPTSTMVAALVGACH--- 576
Query: 423 VNDGREIFTRMTEEYGIQAKTE---HYIYMVKLLGLAGNLEE 461
G I + ++ KTE HY+ + + AG E
Sbjct: 577 -EQGNVIIGERSARRLLEMKTENAGHYVLIANMYAAAGCWNE 617
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 171/396 (43%), Gaps = 43/396 (10%)
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS----ENSDLPGLRFVHGGAIVSGLGR 137
A R A L + LR L PD T + S SD+ +HG ++ +GL
Sbjct: 32 AIRLLPAPLLVFSQLRRLLPPDAATQLLLHPIASLLHLHRSDIRIGLQLHGLSLSAGLSC 91
Query: 138 DSITSSALVTAYSK-LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S L++ YS SL+ A + G + P+ N +IS + G +L + M
Sbjct: 92 YSHLLPHLLSFYSHHPSLLPTASSLAAGSTSPEPY--NVLISACLNHGLPRHALAAYQKM 149
Query: 197 L-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
+ + PD +T ++ E + L +G+ +H + D + + + LVSMYA+C
Sbjct: 150 VDKDAVPPDAFTYPKVLRACAETADLVLGRAVHVRAAAAGMDGHLFFQNALVSMYAKCGD 209
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV-------- 307
+ +A VF+ + + D+V+W+++I+GY+ G + +A+ FR++ +G +A+ V
Sbjct: 210 LAAARRVFDGMDNRDVVSWNSMISGYAASGQWREAVELFRQMQAEGAEANSVTWNTIAGG 269
Query: 308 -------------------------LIASVLAAAAKSANVW--PGAVIHGYVIQHGFELS 340
+ V+ + A S W G IHG ++
Sbjct: 270 YIQMRDYRAALGLIRDMVRGGAEVDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEI 329
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V +A++ MY++C + + +F TM ++ +N+++ G L A FR+++
Sbjct: 330 DSVVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALLDDAEAASRLFREMVC 389
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+ P+ T L C + G+E+ + +
Sbjct: 390 SDVQPNYVTVVTYLALCARVANLQHGQELHAHIIRQ 425
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 136/302 (45%), Gaps = 12/302 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
KE+H L + ++ +YA N + A +LF + WN+++ +AL
Sbjct: 315 KEIHGLAVRMQCHEIDSVVNAVITMYARCNDMERALMLFRTMRCPGLVAWNTMLAGFALL 374
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A LF+ ++ + ++P+ T C+ ++L + +H I G R +
Sbjct: 375 DDAEAASRLFREMVCSDVQPNYVTVVTYLALCARVANLQHGQELHAHIIRQGFKRYCLLW 434
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ YSK + A VFD + D D++ SMI+G+ G SL+ F M+ G
Sbjct: 435 NSLIDMYSKSGRLSVAQNVFDTMDDRDMISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIM 494
Query: 203 PDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
PD +V ++S L+ G+ + + +K + Y S +V +YAR +
Sbjct: 495 PDAIIMVTVLSACSHSGLVDEGEELFDKMVSSYGIKPQMEHY----SCMVDLYARAGLLE 550
Query: 258 SAYHVFN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKADP-VLIASVLA 314
A + N + F P +AL+ +QG+ R+ L M+ + A VLIA++ A
Sbjct: 551 KAEELLNQTPFPPTSTMVAALVGACHEQGNVIIGERSARRLLEMKTENAGHYVLIANMYA 610
Query: 315 AA 316
AA
Sbjct: 611 AA 612
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/254 (19%), Positives = 96/254 (37%), Gaps = 46/254 (18%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L L +L +ELHA + + R L+ +Y+ + L A+ +FD R +
Sbjct: 403 LALCARVANLQHGQELHAHIIRQGFKRYCLLWNSLIDMYSKSGRLSVAQNVFDTMDDRDM 462
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
+ S+I Y + + + FK ++ + + PD + ACS H G
Sbjct: 463 ISFTSMIAGYGMQGKGIVSLRFFKQMIDSGIMPDAIIMVTVLSACS-----------HSG 511
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-----PDLVLCNSMISGFAHCG 184
L+DE ++FD + P + + M+ +A G
Sbjct: 512 ------------------------LVDEGEELFDKMVSSYGIKPQMEHYSCMVDLYARAG 547
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYDYVS 243
+K+ +L + + P + L+ E + +G+ L+ + ++ YV
Sbjct: 548 LLEKAEELLN---QTPFPPTSTMVAALVGACHEQGNVIIGERSARRLLEMKTENAGHYV- 603
Query: 244 SVLVSMYARCNCMN 257
++ +MYA C N
Sbjct: 604 -LIANMYAAAGCWN 616
>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
Length = 852
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 174/587 (29%), Positives = 286/587 (48%), Gaps = 60/587 (10%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAYAL 81
H L+ + F LV +Y+ L A ++FD+ QR V WNSI+ A+
Sbjct: 139 FHGLICCNGFESNVFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVK 198
Query: 82 AHRFNDAKSLFKNL-LRTQLKPDN-----FTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ A LF + L KP N + I AC +P + VHG AI +G
Sbjct: 199 SSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGT 258
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD- 194
D +AL+ AY+K L++ A+KVF+ + D+V N+M++G++ G + + +LF
Sbjct: 259 FLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKN 318
Query: 195 ------------W----------------------MLRLGKTPDEYTLVGLISGLWEPSL 220
W M+ G P+ T++ ++S
Sbjct: 319 MRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGA 378
Query: 221 LSVGQGIHGFCLKSSFDSYD----------YVSSVLVSMYARCNCMNSAYHVFNS--LFH 268
S G IH + LK+ + D V + L+ MY++C +A +F+ L
Sbjct: 379 FSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEE 438
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQ--GKKADPVLIASVLAAAAKSANVWPGA 326
++VTW+ +I G++Q GD AL F ++ + G + I+ +L A A A + G
Sbjct: 439 RNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGK 498
Query: 327 VIHGYVIQH-GFELSV-MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
IH YV++H ++ S V++ L++MYSKCG + VF++MS+++ I++ S++ G G+
Sbjct: 499 QIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGM 558
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG +A + F + + G PD+ TF +L AC H G+V+ G F M+ +YG+ + E
Sbjct: 559 HGRGSEALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAE 618
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY Y + LL G L++A+ + +P V ALLS C ++ N +LAE ++L E
Sbjct: 619 HYAYAIDLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEM 678
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
+ ++SN YA GRW DV ++R + +G++K G SWV G
Sbjct: 679 NAENDGSYTLISNIYATAGRWKDVARIRHLMKKSGIKKRPGCSWVQG 725
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 118/467 (25%), Positives = 207/467 (44%), Gaps = 69/467 (14%)
Query: 29 VAKASLLRDPFYA-----TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
V+ +L +PF + T +V Y A ++ ++ WN +IR +
Sbjct: 37 VSLPALPSEPFISPRSLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQG 96
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRDSI 140
R + A ++ +LR + D+FT + +AC E LP R HG +G +
Sbjct: 97 RLDSAINVSCRMLRAGTRLDHFTLPHVLKACGE---LPSYRCGSAFHGLICCNGFESNVF 153
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSD---PDLVLCNSMISGFAHCGFWDKSLQLFDWM- 196
+ALV YS+ ++EA +FD ++ D++ NS++S +L LF M
Sbjct: 154 ICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMT 213
Query: 197 LRLGKTP-----DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
L + + P D ++V ++ + + +HG +++ +V + L+ YA
Sbjct: 214 LIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYA 273
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG----------------------- 288
+C M +A VFN + D+V+W+A++ GYSQ G++
Sbjct: 274 KCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTA 333
Query: 289 ------------KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH- 335
+AL FR++ G + V I SVL+A A G IH Y +++
Sbjct: 334 VIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNC 393
Query: 336 ---------GFELSVMVSSALVDMYSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGL 384
G + +MV +AL+DMYSKC +F+ + ERN++T+ +I G
Sbjct: 394 LLTLDNDFGGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQ 453
Query: 385 HGFTYQAFEFFRDIIEK--GLNPDESTFSALLCACCHGGLVNDGREI 429
+G + A + F ++I + G+ P+ T S +L AC H + G++I
Sbjct: 454 YGDSNDALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQI 500
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ +V +Y D A+ V + V+ V N +I G D ++ + MLR G
Sbjct: 55 TGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTR 114
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D +TL ++ E G HG + F+S ++ + LV+MY+RC + A +
Sbjct: 115 LDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEASMI 174
Query: 263 FNSLFH---PDLVTWSALITGYSQQGDYGKALYYFRKLNM------QGKKADPVLIASVL 313
F+ + D+++W+++++ + + + AL F K+ + +++D + I ++L
Sbjct: 175 FDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNIL 234
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A V +HG I++G L V V +AL+D Y+KCG + ++VF M ++++
Sbjct: 235 PACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKDVV 294
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++N+++ G G AFE F+++ ++ + D T++A++ G ++ +F +M
Sbjct: 295 SWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFRQM 354
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 188/465 (40%), Gaps = 94/465 (20%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S +++ +TKE+H + D F L+ YA ++ +A +F+ +
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFKD 292
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI-----TRACSENS----- 118
V WN+++ Y+ + F A LFKN+ + + D T+ + R CS +
Sbjct: 293 VVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALNVFR 352
Query: 119 ------DLPGL--------------RFVHGGAI---------------VSGLGRDSITSS 143
LP F G I G D + +
Sbjct: 353 QMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLMVYN 412
Query: 144 ALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR--L 199
AL+ YSK A +FD + + ++V MI G A G + +L+LF M+
Sbjct: 413 ALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISEPY 472
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK-SSFDSYDY-VSSVLVSMYARCNCMN 257
G P+ YT+ ++ + + +G+ IH + L+ +DS Y V++ L++MY++C ++
Sbjct: 473 GVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCGDVD 532
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A HVF+S+ ++W++++TGY G +AL F K+ G D + VL A
Sbjct: 533 TARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYAC- 591
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT--- 374
S CG + G+ F++MS +T
Sbjct: 592 ----------------------------------SHCGMVDQGLSYFDSMSADYGLTPRA 617
Query: 375 --YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
Y I L G +A++ +D+ + P + ALL AC
Sbjct: 618 EHYAYAIDLLARFGRLDKAWKTVKDM---PMEPTAVVWVALLSAC 659
>gi|449462493|ref|XP_004148975.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 613
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 164/551 (29%), Positives = 298/551 (54%), Gaps = 12/551 (2%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
LHFL + + +H+S R + HA V L ++ F TKL+ Y++ L ++FD
Sbjct: 34 LHFL--QHAINHRSQKRIHQSHARVITHGLGQNTFLITKLISAYSICGDLKELNLIFDLA 91
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
++V++WNS+I Y F+ A F + + + PD+FT + + +A +E ++ +
Sbjct: 92 SIKTVYIWNSLISGYVKKGMFHGAFGRFNEMQKCNIVPDDFTLSILAKASNELGNVVVAK 151
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG---FA 181
+HG ++ G D I +++L++ Y K E++K+F+ + + + N +++G F+
Sbjct: 152 SIHGKSLRLGFISDIIVANSLMSMYFKYGECKESLKLFNEMPERNSGSWNVLLAGYASFS 211
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS-LLSVGQGIHGFCLKSSFD--- 237
C + ++ + M G PD +T+ L+ P+ LS G+ +H + +K+ D
Sbjct: 212 DCFYVKEAWEAVRNMQLDGIKPDAFTISSLLQFCGHPNGKLSYGKELHCYIVKNELDLDS 271
Query: 238 -SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
S ++ L+ MY+R N ++ +VF+ + ++ W+A+++GY+Q D KAL F +
Sbjct: 272 GSKFHIGCGLIEMYSRENNTIASRYVFDQIKSRNIYVWTAMVSGYAQNEDPDKALILFHE 331
Query: 297 LNMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ M+ G + V + S+L A + A + G IHGY I+ + V + +AL+D YSKCG
Sbjct: 332 MQMKDGIVPNKVSLVSLLPACSLHAGLMNGKQIHGYAIRKEYHNDVTLCNALIDTYSKCG 391
Query: 356 YLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
L +VFE+ S ++ I++ ++I GL+G ++ + D++E+ + PD+ T A+L
Sbjct: 392 SLEYAKKVFESDSFCKDTISWTTLISAYGLYGLAEKSIRLYNDMVERSIKPDQITVLAVL 451
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC GLVN+G +++ +E+ I+ E +V +LG +G LE+A+SFI ++
Sbjct: 452 SACGRSGLVNEGLQLYNTAVQEHKIEPTAEICAAVVYMLGNSGELEQAFSFISTMMVEPG 511
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
P V GAL+S Y N+++ E+ L E +P + + LSN YA RWD V +LR+
Sbjct: 512 PGVWGALVSASIKYRNNEMLELAYRYLVELEPDNPSNFISLSNLYASASRWDAVAELRNT 571
Query: 535 IVDNGLRKEAG 545
+ + K G
Sbjct: 572 MKERENVKVVG 582
>gi|357113878|ref|XP_003558728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g15300-like [Brachypodium distachyon]
Length = 532
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 167/549 (30%), Positives = 287/549 (52%), Gaps = 53/549 (9%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLV--RLYALNNVLPSARILFDKTPQRSVFLWNS 74
+SL + K++HAL+ L DP +L+ A+ + A ++FD+ P+ +F++N+
Sbjct: 19 RSLRQIKQVHALMVLRGFLSDPSALRELLFASAVAVRGAIAHAYLVFDQIPRPDLFMYNT 78
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQ----LKPDNFTYACITRACSENSDLPGLRFVHGGA 130
+IR A DA SL+ + R ++PD T+ + RAC+ VH
Sbjct: 79 LIRGAAHTAAPRDAVSLYARMARRGSCGGVRPDKITFPFVLRACTAMGAGGTGAQVHAHV 138
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ +G D+ +AL+ ++ + A +FDG + D V ++MI+G A G +
Sbjct: 139 VKAGCESDAFVRNALIGMHASCGELGVASALFDGRAREDAVAWSAMITGCARRGDIVAAR 198
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSM 249
+LFD + P + D+VS +V+++
Sbjct: 199 KLFD------ECPVK----------------------------------DHVSWNVMITA 218
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+ M A +FN + D+V+W+A+I+G+ + G + A+ F ++ G+K D V +
Sbjct: 219 YAKRGEMAPARVLFNRIPERDVVSWNAMISGHVRCGSHVYAMELFEQMQRMGQKPDVVTM 278
Query: 310 ASVLAAAAKSANVWPGAVIHGYV----IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
S+L+A A S ++ G +H + ++ GF +V++ +AL+DMY+KCG + +QVF
Sbjct: 279 LSLLSACADSGDIDVGRRLHSSLSEMFLRTGF--TVILGNALIDMYAKCGSMKSALQVFW 336
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M ++++ T+NS+I GL LHG ++ + F+ ++++ + PDE TF A+L AC HGG+V+
Sbjct: 337 VMRDKDVSTWNSIIGGLALHGHVLESIDVFKKMLKEKVRPDEITFVAVLIACSHGGMVDK 396
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GRE F M Y I+ +HY MV +LG AG L+EA+ FI ++ + + LL C
Sbjct: 397 GREYFNLMQHHYRIEPNVKHYGCMVDMLGRAGLLKEAFEFIDTMKVEPNSVIWRTLLGAC 456
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++G +LAE QL + + V+LSN YA G W + K+R + D+G+ K+AG
Sbjct: 457 RVHGEIELAEHANRQLLKARNDESGDYVLLSNIYASAGEWSESEKMRKLMDDSGVNKQAG 516
Query: 546 VSWVSGSSN 554
+ V GS+
Sbjct: 517 RTVVDGSAK 525
>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 158/439 (35%), Positives = 235/439 (53%), Gaps = 3/439 (0%)
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSITSSALV---TAYSKLSLIDEAIKVFDGVSDPDLV 171
S+ + L L+ + I + L D + L+ T S +D A +FD + D D++
Sbjct: 37 SKCTSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDII 96
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
L N M G+A + LF +L G PD+YT L+ L G G+H F
Sbjct: 97 LFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFA 156
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
+K + Y+ L++MYA CN MN+A VF+ + P +V+++A+ITGY++ +AL
Sbjct: 157 VKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEAL 216
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
FR+L + V + SV+ + A + G IH YV + GF+ V V++AL+DM+
Sbjct: 217 SLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMF 276
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+KCG L I +FE M R+ ++++I+ HG +A F ++ +G+ PDE TF
Sbjct: 277 AKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFL 336
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
LL AC H GLV GR F M++ YGI +HY MV LLG AG+L+EAY+F+ L
Sbjct: 337 GLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEI 396
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
P + LLS C +GN ++A+ V ++FE D G V+LSN YA GRW+DV L
Sbjct: 397 KATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHL 456
Query: 532 RDDIVDNGLRKEAGVSWVS 550
R + D G+ K G S V
Sbjct: 457 RKLMKDRGVVKVPGCSSVE 475
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 194/410 (47%), Gaps = 11/410 (2%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARIL 60
LH L L LSK SL+ K++ A K +L D TKL+ LN + + A L
Sbjct: 29 QLHPLSL-LSKC-TSLNELKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHL 86
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FD+ + + L+N + R YA ++ A SLF LL + L PD++T++ + +AC+ + L
Sbjct: 87 FDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKAL 146
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+H A+ GL + L+ Y++ + ++ A VFD + P +V N++I+G+
Sbjct: 147 REGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGY 206
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
A +++L LF + P + T++ +I L +G+ IH + K FD Y
Sbjct: 207 ARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYV 266
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V++ L+ M+A+C + A +F + D WSA+I ++ GD KA+ F ++ +
Sbjct: 267 KVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKRE 326
Query: 301 GKKADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G + D + +L A + + V G + +G + +VD+ + G+L
Sbjct: 327 GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDE 386
Query: 360 GIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+ + + I + +++ HG E + +IE+ D++
Sbjct: 387 AYNFVDKLEIKATPILWRTLLSACSTHG----NVEMAKRVIERIFELDDA 432
>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
Length = 1286
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 246/457 (53%), Gaps = 2/457 (0%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSITSSALVTAYSKLS 153
+ R L PD Y+ + + C+ + R VH + S L + + +V Y+K
Sbjct: 78 IQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCG 137
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
+D+A ++FD + D+V ++I+GF+ +L LF MLRLG P+ +TL L+
Sbjct: 138 CLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLSSLLK 197
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
L G +H FCLK + S YV S LV MYARC M++A F+ + V+
Sbjct: 198 ASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVS 257
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+ALI+G++++G+ AL+ K+ + + +SVL+A A + G +H ++I
Sbjct: 258 WNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQGKWVHAHMI 317
Query: 334 QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ G +L + + L+DMY+K G + +VF+ + + +++++N+++ G HG + +
Sbjct: 318 KSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLD 377
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F ++ G+ P+E +F +L AC H GL+++G F M ++Y ++ HY+ V LL
Sbjct: 378 RFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLL 436
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G G L+ A FI +P AV GALL C ++ N +L A + FE DP ++
Sbjct: 437 GRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRM 496
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+LSN YA GRW DV K+R + ++G++K+ SWV
Sbjct: 497 LLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVM 342
Q D G LY + D L + +L + V G ++H +++ H + ++
Sbjct: 65 QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV 124
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+ + +V+MY+KCG L ++F+ M ++++T+ ++I G + A F ++ G
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
P+ T S+LL A ++ G ++ +YG Q+ +V + G+++ A
Sbjct: 185 FQPNHFTLSSLLKASGSEHGLDPGTQLHA-FCLKYGYQSSVYVGSALVDMYARCGHMDAA 243
>gi|449445041|ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 269/529 (50%), Gaps = 1/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H + K L+ D F + L+ +YA + A LFD+ PQR V WN++I Y
Sbjct: 126 RRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKD 185
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A F + +P++ T+ + +C+ +L + VH I + D+
Sbjct: 186 GKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVL 245
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SALV Y K ++ A +VF+ + + + N+MI+G++ G ++L M G
Sbjct: 246 SALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTK 305
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P TL +I L G+ IHG+ L++ D ++ L+ Y +C ++SA +
Sbjct: 306 PTLMTLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETI 365
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F ++ ++V+W+ +I+G+ G++ +AL+ + + K D + +S L+A ++ A +
Sbjct: 366 FRTISKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAAL 425
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H +I H E + +V AL+DMY+KCG + ++F + +R+++++ S+I
Sbjct: 426 DKGRELHYCIINHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAY 485
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G HG +A F ++ + + D TF A+L AC H GLV++G F M +Y I+
Sbjct: 486 GSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPG 545
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIW-SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY ++ LLG AG L EAY + S D + L S C ++ N L + L
Sbjct: 546 IEHYSCLIDLLGRAGRLHEAYEILQRSKETRSDIGLLSTLFSACLLHNNFVLGIQIGKML 605
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E DP + ++LSN YA +WD+V K+R + + GL+K G SW+
Sbjct: 606 IEVDPDDPSTYILLSNMYASVNKWDEVRKVRRKMKELGLKKSPGCSWIE 654
Score = 201 bits (511), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 132/468 (28%), Positives = 230/468 (49%), Gaps = 11/468 (2%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP-QRS 68
L S + L + K +H + + + L+ Y + SA ++F
Sbjct: 10 LRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVFQTNDCPLD 69
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V LWN+++ AY RF +A LF L + ++PD +TY + +AC + R +H
Sbjct: 70 VSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGRVIYGRRIH 129
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ +GL D S+L+ Y+K +AIK+FD D+ N++IS + G +
Sbjct: 130 NHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISCYFKDGKAE 189
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+L+ FD M LG P+ T ++S L G+ +H ++ +V S LV
Sbjct: 190 MALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLDAFVLSALV 249
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY +C C+ A VF + + +TW+A+ITGYS +GD + ++N +G K +
Sbjct: 250 DMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMNDEGTKPTLM 309
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ S++ A+++S + G IHGY++++ ++ + + +L+D Y KCGY+ +F T+
Sbjct: 310 TLTSIIYASSRSVQLRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTI 369
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
S+ ++++N +I G + G QA + ++ E + PD TFS+ L AC ++ GR
Sbjct: 370 SKNEVVSWNVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGR 429
Query: 428 EIFTRMTEEYGIQAKTE-HYIYMVKLLGL---AGNLEEAYSFIWSLPK 471
E+ + I K E + I M LL + G+++EA LPK
Sbjct: 430 ELHYCI-----INHKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPK 472
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 190/403 (47%), Gaps = 11/403 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L R KE+H + + +L D F + LV +Y L A+ +F+K P+++ WN++I
Sbjct: 222 NLERGKEVHRELIERRILLDAFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMIT 281
Query: 78 AYALAHRFNDAKSLFKNLLRTQ---LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
Y+L D++S + L+R KP T I A S + L +F+HG + +
Sbjct: 282 GYSLK---GDSRSCIELLMRMNDEGTKPTLMTLTSIIYASSRSVQLRHGKFIHGYILRNR 338
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ D +L+ Y K + A +F +S ++V N MISG G ++L ++D
Sbjct: 339 IDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSWNVMISGHVMVGNHIQALHIYD 398
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M PD T +S + + L G+ +H + ++ + V L+ MYA+C
Sbjct: 399 NMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIINHKLEANEIVMGALLDMYAKCG 458
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ A +F+ L DLV+W+++I Y G +AL F ++ +AD V +VL+
Sbjct: 459 DVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLS 518
Query: 315 AAAKSANVWPGAV-IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE--RN 371
A + + V G + + V+Q+ + + S L+D+ + G L ++ + E +
Sbjct: 519 ACSHAGLVDEGYMYFNEMVVQYDIKPGIEHYSCLIDLLGRAGRLHEAYEILQRSKETRSD 578
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
I +++ LH + + +IE ++PD+ + LL
Sbjct: 579 IGLLSTLFSACLLHNNFVLGIQIGKMLIE--VDPDDPSTYILL 619
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 152/329 (46%), Gaps = 2/329 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D T R C+ + L + +H G + + S +L+ Y A VF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 163 DGVSDP-DLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGLISGLWEPSL 220
P D+ L N+++S + + + ++LQLFD + PD YT ++
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ G+ IH LK+ +V S L++MYA+C+ A +F+ D+ W+A+I+
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y + G AL F K+ G + + V V+++ + N+ G +H +I+ L
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIERRILLD 241
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V SALVDMY KCG L + +VFE + +N IT+N++I G L G + E + +
Sbjct: 242 AFVLSALVDMYGKCGCLEMAKEVFEKIPRKNAITWNAMITGYSLKGDSRSCIELLMRMND 301
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREI 429
+G P T ++++ A + G+ I
Sbjct: 302 EGTKPTLMTLTSIIYASSRSVQLRHGKFI 330
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 122/272 (44%), Gaps = 7/272 (2%)
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D TL+ + LL G+ IH F S +S L+ Y C+ SA VF
Sbjct: 2 DYVTLLSALRTCTSSKLLKQGKLIHQRIFSCGFQSNIVLSKSLIGFYFSCHDYASAELVF 61
Query: 264 NSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSAN 321
+ P D+ W+AL++ Y+ + +AL F +LN + D VL A
Sbjct: 62 QTNDCPLDVSLWNALLSAYTNNFRFVEALQLFDQLNCNSYVRPDFYTYPVVLKACGGLGR 121
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V G IH ++++ G V V S+L++MY+KC I++F+ +R++ +N+VI
Sbjct: 122 VIYGRRIHNHLLKTGLIWDVFVGSSLMNMYAKCDQFVDAIKLFDEFPQRDVGCWNAVISC 181
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G A + F + E G P+ TF+ ++ +C + G+E+ + E +
Sbjct: 182 YFKDGKAEMALKTFDKMKELGFEPNSVTFTVVVSSCTRLLNLERGKEVHRELIER---RI 238
Query: 442 KTEHYIY--MVKLLGLAGNLEEAYSFIWSLPK 471
+ ++ +V + G G LE A +P+
Sbjct: 239 LLDAFVLSALVDMYGKCGCLEMAKEVFEKIPR 270
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 10/257 (3%)
Query: 13 SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLW 72
S+S Q L K +H + + + D F L+ Y + SA +F + V W
Sbjct: 319 SRSVQ-LRHGKFIHGYILRNRIDVDIFIDVSLIDFYFKCGYVSSAETIFRTISKNEVVSW 377
Query: 73 NSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
N +I + + A ++ N+ +KPD T++ ACS+ + L R +H I
Sbjct: 378 NVMISGHVMVGNHIQALHIYDNMKEHHVKPDALTFSSTLSACSQLAALDKGRELHYCIIN 437
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
L + I AL+ Y+K +DEA K+F + DLV SMI + G ++L+L
Sbjct: 438 HKLEANEIVMGALLDMYAKCGDVDEARKLFHQLPKRDLVSWTSMIFAYGSHGQASEALRL 497
Query: 193 FDWMLRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
FD M +L D T + ++S GL + + + + + +K + Y S L+
Sbjct: 498 FDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMYFNEMVVQYDIKPGIEHY----SCLI 553
Query: 248 SMYARCNCMNSAYHVFN 264
+ R ++ AY +
Sbjct: 554 DLLGRAGRLHEAYEILQ 570
>gi|242079743|ref|XP_002444640.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
gi|241940990|gb|EES14135.1| hypothetical protein SORBIDRAFT_07g025280 [Sorghum bicolor]
Length = 690
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 175/541 (32%), Positives = 278/541 (51%), Gaps = 25/541 (4%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR-----SVFLWN 73
L +ELHA V + L RDP A+KL+ YAL +P+ R +F + L N
Sbjct: 117 LRHVQELHAQVLRQGLHRDPRAASKLIASYALLRRVPACRCVFSAAAAPPFAPSTALLAN 176
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
+++RAYAL + A ++F ++ Q D FTY+ + +A + P +R H
Sbjct: 177 TLLRAYALNSLPHAALAVFVDMPLRQR--DTFTYSFLIKALATAGVTP-VRAAHTHVFKL 233
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D+ +AL+ AYSK + +A KVFD ++ D+V N+ ++ G D + +F
Sbjct: 234 GSVEDTFVGNALIDAYSKNDGLSDAKKVFDEMTTRDVVSWNTAMAAMVRKGEVDAARSMF 293
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSL---LSVGQGIHGFCLKSSFDSYDYVS-SVLVSM 249
D M P++ T+ W L G+ F L + VS S +VS
Sbjct: 294 DEM------PEKDTVS------WNTMLDGYAKAGEAEEAFELFQRMPGRNVVSWSTVVSA 341
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y + M A +F+ + +LVTW+ +++ +Q+G G+A F ++ + D V +
Sbjct: 342 YCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVGEAGRLFTEMKEAAIELDVVAV 401
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET-MS 368
S+LAA A+S + G IH +V Q S +V +AL+DM+ KCG + +F+T +
Sbjct: 402 VSILAACAESGCLALGKRIHRHVRQRKLGRSTLVCNALMDMFCKCGCVNRADYIFDTEIV 461
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E++ +++N +I G +HG +A F + ++G +PD T +L AC H GLV +GR
Sbjct: 462 EKDSVSWNIIIGGFAMHGHGEKALNLFTQMKQQGFHPDAVTLINVLSACTHMGLVEEGRR 521
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F M +YGI+ + EHY MV LLG G ++EA I S+P + + G+LLS C ++
Sbjct: 522 FFANMETDYGIKPEIEHYGCMVDLLGRGGLIKEAVDMIKSMPWEPNEVIWGSLLSACRLH 581
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
N + AE+ A++L P +LSN YAE G+W D+ K R + G +K AG SW
Sbjct: 582 KNVEYAELAANELSNLQPSNAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAGSSW 641
Query: 549 V 549
+
Sbjct: 642 I 642
>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g13650-like [Cucumis sativus]
Length = 1037
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 271/532 (50%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +LH+ KA + D L+ LY+ + +A F T ++ LWN ++
Sbjct: 377 ALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLV 436
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY +D+ +F+ + + P+ FTY I R C+ L +H I +G
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL 496
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ S L+ Y+K + A+++ + + D+V +MI+G+ + ++LQLF+ M
Sbjct: 497 NVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME 556
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G D IS L GQ IH + F + +++ L+S+YARC +
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY F + + ++W++L++G +Q G + +AL F ++ + + S ++AAA
Sbjct: 617 EAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAA 676
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
AN+ G IH V++ G++ VS++L+ +Y+K G + + F MSERN+I++N+
Sbjct: 677 SLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNA 736
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G HG +A F ++ G+ P+ TF +L AC H GLV +G + F M + +
Sbjct: 737 MITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIH 796
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
+ K+EHY+ +V LLG AG L+ A +I +P P D + LLS C I+ N ++ E
Sbjct: 797 DLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERA 856
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
AH L E +P A V++SN YA +W R + D G++KE G SW+
Sbjct: 857 AHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDRGVKKEPGRSWI 908
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 227/471 (48%), Gaps = 4/471 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+LE + SL T LH ++K+ +P LV Y + A +FD+ RS
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC-SENSDLPGLRFVH 127
VF WN +I + LF+ +L + P+ +T+A + +AC + ++ VH
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + ++ L+ YSK I+ A KVF+ + D+V +MISG + G +
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ LF M P Y L ++S + L +G+ +H +K F S YV + LV
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
++Y+R + SA +F+++ D V++++LI+G QQG +AL F K+ K D +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+AS+L+A A + G +H + I+ G +++ +L+D+YSKC + + F T
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTT 423
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
NI+ +N +++ G +FE FR + +G+ P++ T+ ++L C G + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
+I T + + G Q ++ + G L A + LP+ D VS
Sbjct: 484 QIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE--DDVVS 531
Score = 174 bits (442), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 214/455 (47%), Gaps = 1/455 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S Q ++LH LV K + + LV LY+ + L SA +F R
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+NS+I + A LF + R LKPD T A + AC+ L +H
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI +G+ D I +L+ YSK + ++ A K F ++VL N M+ +
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNLSD 446
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S ++F M G P+++T ++ L +G+ IH +K+ F YV SVL+
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLID 506
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ + A + L D+V+W+A+I GY Q + +AL F ++ +G + D +
Sbjct: 507 MYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIG 566
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
AS ++A A + G IH GF + +++AL+ +Y++CG + FE +
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++N I++NS++ GL G+ +A + F ++ + T+ + + A + G++
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
I + M + G ++ E ++ L +G++ +A+
Sbjct: 687 IHS-MVLKTGYDSEREVSNSLISLYAKSGSISDAW 720
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 14/263 (5%)
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K +QL ++M G + + L+ G L +H KS FD + LV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
Y R + A VF+ + + +W+ +I + Q + FR++ +G +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQ-------HGFELSVMVSSALVDMYSKCGYLGLG 360
A VL A G + YV Q +GF+ S +V++ L+D+YSK GY+
Sbjct: 161 TFAGVLKACV------GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF + ++I+T+ ++I GL +G +A F D+ + P S++L A
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 421 GLVNDGREIFTRMTEEYGIQAKT 443
L G ++ + ++G ++T
Sbjct: 275 QLFELGEQLHC-LVIKWGFHSET 296
>gi|356530090|ref|XP_003533617.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Glycine max]
Length = 566
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 154/550 (28%), Positives = 281/550 (51%), Gaps = 32/550 (5%)
Query: 33 SLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSL 91
+L DP L++ YAL+ + + A LF + + ++ WN +IR ++++ + N+A +
Sbjct: 5 NLRTDPSTIYNLIKSYALSPSTILKAHNLFQQIHRPTLPFWNIMIRGWSVSDQPNEAIRM 64
Query: 92 FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
+ + R L +N TY + +AC+ D+ +H + G S+AL+ Y
Sbjct: 65 YNLMYRQGLLGNNLTYLFLFKACARVPDVSCGSTIHARVLKLGFESHLYVSNALINMYGS 124
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
+ A KVFD + + DLV NS++ G+ C + + L +F+ M G D T+V +
Sbjct: 125 CGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKRFREVLGVFEAMRVAGVKGDAVTMVKV 184
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN-------------- 257
+ V + + +++ + Y+ + L+ MY R ++
Sbjct: 185 VLACTSLGEWGVADAMVDYIEENNVEIDVYLGNTLIDMYGRRGLVHLARGVFDQMQWRNL 244
Query: 258 -----------------SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+A +F+++ D+++W+ +IT YSQ G + +AL F+++
Sbjct: 245 VSWNAMIMGYGKAGNLVAARELFDAMSQRDVISWTNMITSYSQAGQFTEALRLFKEMMES 304
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
K D + +ASVL+A A + ++ G H Y+ ++ + + V +AL+DMY KCG +
Sbjct: 305 KVKPDEITVASVLSACAHTGSLDVGEAAHDYIQKYDVKADIYVGNALIDMYCKCGVVEKA 364
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++VF+ M +++ +++ S+I GL ++GF A ++F ++ + + P F +L AC H
Sbjct: 365 LEVFKEMRKKDSVSWTSIISGLAVNGFADSALDYFSRMLREVVQPSHGAFVGILLACAHA 424
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV+ G E F M + YG++ + +HY +V LL +GNL+ A+ FI +P D +
Sbjct: 425 GLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIKEMPVTPDVVIWRI 484
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLS ++GN LAEI +L E DP V+ SNTYA RW+D +K+R+ + + +
Sbjct: 485 LLSASQVHGNIPLAEIATKKLLELDPSNSGNYVLSSNTYAGSNRWEDAVKMRELMEKSNV 544
Query: 541 RKEAGVSWVS 550
+K +G S +
Sbjct: 545 QKPSGSSCIE 554
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/440 (24%), Positives = 182/440 (41%), Gaps = 85/440 (19%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA V K + + L+ +Y L A+ +FD+ P+R + WNS++ Y R
Sbjct: 99 IHARVLKLGFESHLYVSNALINMYGSCGHLGLAQKVFDEMPERDLVSWNSLVCGYGQCKR 158
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACS----------------ENS---------- 118
F + +F+ + +K D T + AC+ EN+
Sbjct: 159 FREVLGVFEAMRVAGVKGDAVTMVKVVLACTSLGEWGVADAMVDYIEENNVEIDVYLGNT 218
Query: 119 --DLPGLR-FVH--GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
D+ G R VH G R+ ++ +A++ Y K + A ++FD +S D++
Sbjct: 219 LIDMYGRRGLVHLARGVFDQMQWRNLVSWNAMIMGYGKAGNLVAARELFDAMSQRDVISW 278
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
+MI+ ++ G + ++L+LF M+ PDE T+ ++S L VG+ H + K
Sbjct: 279 TNMITSYSQAGQFTEALRLFKEMMESKVKPDEITVASVLSACAHTGSLDVGEAAHDYIQK 338
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ YV + L+ MY +C + A VF + D V+W+++I+G + G AL Y
Sbjct: 339 YDVKADIYVGNALIDMYCKCGVVEKALEVFKEMRKKDSVSWTSIISGLAVNGFADSALDY 398
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ--HGFELSVMVSSALVDMY 351
F ++ + V+Q HG A V +
Sbjct: 399 FSRMLRE-------------------------------VVQPSHG---------AFVGIL 418
Query: 352 SKCGYLGL---GIQVFETMS-----ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
C + GL G++ FE+M + + Y V+ L G +AFEF + E +
Sbjct: 419 LACAHAGLVDKGLEYFESMEKVYGLKPEMKHYGCVVDLLSRSGNLQRAFEFIK---EMPV 475
Query: 404 NPDESTFSALLCAC-CHGGL 422
PD + LL A HG +
Sbjct: 476 TPDVVIWRILLSASQVHGNI 495
>gi|218197313|gb|EEC79740.1| hypothetical protein OsI_21088 [Oryza sativa Indica Group]
Length = 1068
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 264/533 (49%), Gaps = 17/533 (3%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH L +R A L+ +YA + + A +F ++ V W+S+I + H
Sbjct: 420 KLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNH 479
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R DA F+ +L +KP++ T+ AC+ L + +H + G+G + +
Sbjct: 480 RSFDALYYFRYML-GHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPN 538
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+ Y K A F S+ D+V N M+SGF G D +L LF+ M+
Sbjct: 539 ALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMM------ 592
Query: 204 DEYTLVGLISGLWEPSL------LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
YT +G + + L VG +H F Y V++ L+ MYA+ ++
Sbjct: 593 --YTSLGRMGACSALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHID 650
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF + D+V+WS++I G+ ALYYFR + + K + V + L+A A
Sbjct: 651 KAIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACA 709
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G IH YV++ G V +AL+D+Y KCG F SE++++++N
Sbjct: 710 ATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNI 769
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
++ G HG A F ++E G +PDE TF L+CAC G+V G E+F R TE++
Sbjct: 770 MLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF-VLMCACSRAGMVIQGWELFHRRTEKF 828
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I +HY MV LL G L EAY+ I +P D AV GALL+ C I+ + +L E+
Sbjct: 829 SIVPNLKHYACMVDLLSRVGKLTEAYNLINRMPIKPDAAVWGALLNGCRIHRHVELGELA 888
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A + E +P AY V+L + Y + G+W V ++R + + GL ++ G SWV
Sbjct: 889 AKVILELEPNDVAYHVLLCDLYTDAGKWAQVARVRKTMREKGLEQDNGCSWVE 941
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/370 (30%), Positives = 188/370 (50%), Gaps = 1/370 (0%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F K P+R VF WN ++ Y +A L+ +L ++PD +T+ C+ R C D
Sbjct: 153 VFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMRPDVYTFPCVLRTCGGIPD 212
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
R VH + G G + +ALVT Y+K I A KVFDG++ D + N+MI+G
Sbjct: 213 WRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAG 272
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ L+LF ML P+ T+ + S + + +HGF +K F
Sbjct: 273 HFENHECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAID 332
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ L+ MY M A +F+ + D ++W+A+I+GY + G KAL + + +
Sbjct: 333 VAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMEL 392
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
D V IAS LAA A + G +H GF V+V++AL++MY+K ++
Sbjct: 393 HNVNPDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDK 452
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
I+VF+ M+E+++++++S+I G + ++ A +FR ++ + P+ TF A L AC
Sbjct: 453 AIEVFKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYMLGH-VKPNSVTFIAALSACAA 511
Query: 420 GGLVNDGREI 429
G + G+EI
Sbjct: 512 TGALRSGKEI 521
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 180/381 (47%), Gaps = 1/381 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+E+HA V + + LV +YA + +AR +FD WN++I +
Sbjct: 217 REVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKVFDGMAMTDCISWNAMIAGHFEN 276
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
H LF +L +++P+ T +T A S++ + +HG A+ G D
Sbjct: 277 HECEAGLELFLTMLENEVQPNLMTITSVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFC 336
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+ L + +A K+F + D + +MISG+ GF DK+L+++ M
Sbjct: 337 NSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMISGYEKNGFPDKALEVYALMELHNVN 396
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+ T+ ++ L VG +H F Y V++ L+ MYA+ ++ A V
Sbjct: 397 PDDVTIASALAACACLGRLDVGIKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEV 456
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V+WS++I G+ ALYYFR + + K + V + L+A A + +
Sbjct: 457 FKFMAEKDVVSWSSMIAGFCFNHRSFDALYYFRYM-LGHVKPNSVTFIAALSACAATGAL 515
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH YV++ G V +AL+D+Y KCG F SE++++++N ++ G
Sbjct: 516 RSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGF 575
Query: 383 GLHGFTYQAFEFFRDIIEKGL 403
HG A F ++ L
Sbjct: 576 VAHGLGDIALSLFNQMMYTSL 596
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 135/270 (50%), Gaps = 4/270 (1%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A+++ + I A +VF + + D+ N M+ G+ GF +++L L+ ML G
Sbjct: 135 NAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAGMR 194
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD YT ++ +G+ +H L+ F V + LV+MYA+C + +A V
Sbjct: 195 PDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAARKV 254
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL--IASVLAAAAKSA 320
F+ + D ++W+A+I G+ + + L F L M + P L I SV A+ +
Sbjct: 255 FDGMAMTDCISWNAMIAGHFENHECEAGLELF--LTMLENEVQPNLMTITSVTVASGMLS 312
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
V +HG+ ++ GF + V ++L+ MY+ G +G ++F M ++ +++ ++I
Sbjct: 313 EVGFAKEMHGFAVKRGFAIDVAFCNSLIQMYTSLGRMGDAGKIFSRMETKDAMSWTAMIS 372
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
G +GF +A E + + +NPD+ T
Sbjct: 373 GYEKNGFPDKALEVYALMELHNVNPDDVTI 402
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 188/408 (46%), Gaps = 24/408 (5%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L KE+HA V + + + + L+ LY A F ++ V WN ++
Sbjct: 514 ALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLS 573
Query: 78 AYALAHRFND-AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ +AH D A SLF ++ T L A AC D+ G++ +H A G
Sbjct: 574 GF-VAHGLGDIALSLFNQMMYTSLGRMGACSALAACACLGRLDV-GIK-LHELAQNKGFI 630
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA--HCGFWDKSLQLFD 194
R + ++AL+ Y+K ID+AI+VF +++ D+V +SMI+GF H F +L F
Sbjct: 631 RYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFNHRSF--DALYYFR 688
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ML K P+ T + +S L G+ IH + L+ S YV + L+ +Y +C
Sbjct: 689 YMLGHVK-PNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGYVPNALLDLYVKCG 747
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ A+ F+ D+V+W+ +++G+ G AL F ++ G+ D V VL
Sbjct: 748 QTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMGEHPDEVTF--VLM 805
Query: 315 AAAKSANVWPGAVIHGYVIQH--GFELSVMVS----SALVDMYSKCGYLGLGIQVFETMS 368
A A G VI G+ + H + S++ + + +VD+ S+ G L + M
Sbjct: 806 CACSRA----GMVIQGWELFHRRTEKFSIVPNLKHYACMVDLLSRVGKLTEAYNLINRMP 861
Query: 369 -ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + + +++ G +H + I+E L P++ + LLC
Sbjct: 862 IKPDAAVWGALLNGCRIHRHVELGELAAKVILE--LEPNDVAYHVLLC 907
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 87/175 (49%)
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+ + ++SM R + A+ VF + D+ +W+ ++ GY + G +AL + ++ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D VL + G +H +V++ GF V V +ALV MY+KCG +
Sbjct: 193 MRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGDEVDVLNALVTMYAKCGDIVAAR 252
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+VF+ M+ + I++N++I G + E F ++E + P+ T +++ A
Sbjct: 253 KVFDGMAMTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTITSVTVA 307
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+ +A++ M + G + +VF M ER++ ++N ++ G G GF +A + + ++ G
Sbjct: 133 LGNAMLSMLVRFGEIWHAWRVFAKMPERDVFSWNVMVGGYGKVGFLEEALDLYYRMLWAG 192
Query: 403 LNPDESTFSALLCACCHGGLVN--DGREI 429
+ PD TF +L C GG+ + GRE+
Sbjct: 193 MRPDVYTFPCVLRTC--GGIPDWRMGREV 219
>gi|356505262|ref|XP_003521411.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g37570-like [Glycine max]
Length = 566
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 286/551 (51%), Gaps = 12/551 (2%)
Query: 3 FNLHFL--VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLV-RLYALNNVLPSARI 59
F LH + L K+ + +++HA + L +D F + R + L + L A
Sbjct: 24 FRLHSAASITTLLKACKKREHLEQVHACIIHRGLEQDHFLVFLFISRAHTLLSTLSYASS 83
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
+F + S LWN++I+++ + F+ S F + PD+FTY + +ACS
Sbjct: 84 VFHRVLAPSTVLWNTLIKSHCQKNLFSHTLSAFARMKAHGALPDSFTYPSVIKACSGTCK 143
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+ +HG A G+ +D ++L+ Y K I +A KVFDG+SD ++V +M+ G
Sbjct: 144 AREGKSLHGSAFRCGVDQDLYVGTSLIDMYGKCGEIADARKVFDGMSDRNVVSWTAMLVG 203
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G ++ +LFD M + + ++ G + LS +G+ + + S+
Sbjct: 204 YVAVGDVVEARKLFDEM----PHRNVASWNSMLQGFVKMGDLSGARGVFDAMPEKNVVSF 259
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+ ++ YA+ M +A +F+ D+V WSALI+GY Q G +AL F ++ +
Sbjct: 260 ----TTMIDGYAKAGDMAAARFLFDCSLEKDVVAWSALISGYVQNGLPNQALRVFLEMEL 315
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV-MVSSALVDMYSKCGYLG 358
K D ++ S+++A+A+ ++ + YV + +L V +AL+DM +KCG +
Sbjct: 316 MNVKPDEFILVSLMSASAQLGHLELAQWVDSYVSKICIDLQQDHVIAALLDMNAKCGNME 375
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+++F+ R+++ Y S+I GL +HG +A F ++ +GL PDE F+ +L AC
Sbjct: 376 RALKLFDEKPRRDVVLYCSMIQGLSIHGRGEEAVNLFNRMLMEGLTPDEVAFTVILTACS 435
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
GLV++GR F M ++Y I +HY MV LL +G++ +AY I +P
Sbjct: 436 RAGLVDEGRNYFQSMKQKYCISPLPDHYACMVDLLSRSGHIRDAYELIKLIPWEPHAGAW 495
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
GALL C +YG+S+L EIVA++LFE +P A V+LS+ YA RW DV +R + +
Sbjct: 496 GALLGACKLYGDSELGEIVANRLFELEPLNAANYVLLSDIYAAAERWIDVSLVRSKMRER 555
Query: 539 GLRKEAGVSWV 549
+RK G S +
Sbjct: 556 RVRKIPGSSKI 566
>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Brachypodium distachyon]
Length = 861
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 175/560 (31%), Positives = 280/560 (50%), Gaps = 34/560 (6%)
Query: 23 KELHALVAKASLL---RDPFYATKLVRLYALNNVLPSARILFDKTPQR--SVFLWNSIIR 77
+E HA K L R+ F L+ +YA ++ A+ LF + + WN++I
Sbjct: 174 REAHAFALKHGFLDKGRERFPFNALLSMYARLGLVDDAQRLFFSSGAGVGDLVTWNTMIS 233
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LG 136
R +A + +++ ++PD T+A ACS L R VH + L
Sbjct: 234 LLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLA 293
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSD--PDLVLCNSMISGFA-HCGFWDKSLQLF 193
+S +SALV Y+ + A +VFD V + L + N+MI G+A H G +++++LF
Sbjct: 294 ANSFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELF 353
Query: 194 DWM-LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
M G P E T+ G++ + + + +HG+ +K S +V + L+ MYAR
Sbjct: 354 SRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNALMDMYAR 413
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM------------- 299
M+ A+ +F + D+V+W+ LITG QG +A R++ +
Sbjct: 414 LGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLEG 473
Query: 300 -----QGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
G++ P + + ++L A A G IHGY ++H E + V SALVDMY+
Sbjct: 474 DDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMYA 533
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFS 411
KCG L L VF+ + RN+IT+N +I+ G+HG +A F ++ G P+E TF
Sbjct: 534 KCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEATPNEVTFI 593
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
A L AC H GLV+ G E+F M +YG + + +V +LG AG L+EAY I S+
Sbjct: 594 AALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYGIISSM-A 652
Query: 472 PVDPAVSG--ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVM 529
P + VS +L C ++ N L I A +LFE +P + ++ V+L N Y+ G W++
Sbjct: 653 PGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENST 712
Query: 530 KLRDDIVDNGLRKEAGVSWV 549
++R + G+ KE G SW+
Sbjct: 713 EVRGMMRQRGVAKEPGCSWI 732
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 30/219 (13%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
+R KE+H + +L D + LV +YA L AR +FD+ P+R+V WN +I AY
Sbjct: 504 ARGKEIHGYAVRHALESDLAVGSALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAY 563
Query: 80 ALAHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGR 137
+ ++A +LF ++ + P+ T+ ACS + + GL G G
Sbjct: 564 GMHGLGDEALALFDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEP 623
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL--FDW 195
+ +V + +DEA + +SM G W L
Sbjct: 624 TPYLHACVVDVLGRAGRLDEAYGII-----------SSMAPGEHQVSAWSTMLGACRLHR 672
Query: 196 MLRLGK---------TPDE---YTLVGLI---SGLWEPS 219
++LG+ PDE Y L+ I +GLWE S
Sbjct: 673 NVKLGRIAAERLFELEPDEASHYVLLCNIYSAAGLWENS 711
>gi|357468777|ref|XP_003604673.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
gi|355505728|gb|AES86870.1| hypothetical protein MTR_4g015760 [Medicago truncatula]
Length = 838
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/530 (29%), Positives = 264/530 (49%), Gaps = 2/530 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H + K + D F + L+ LY + A +F + P+ V LW SII Y +
Sbjct: 262 KVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQS 321
Query: 83 HRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
A + F ++ ++ + PD T + AC++ S+ R VHG GL
Sbjct: 322 GSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCL 381
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++L+ Y K I A +F +SD D++ ++M++ +A G L LF+ ML
Sbjct: 382 ANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRI 441
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ T+V ++ S L G IH + F+ VS+ L+ MY +C A
Sbjct: 442 KPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSPEKAVD 501
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+FN + D++ W+ L +GY+ G ++++ FR + G + D + + +L ++
Sbjct: 502 LFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGI 561
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ +H +VI++GFE + + ++L+++Y+KC + +VF+ M+ ++++T++S+I
Sbjct: 562 LQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDANKVFKGMTYKDVVTWSSIIAA 621
Query: 382 LGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G HG +A + F + P+ TF ++L AC H GL+ +G +F M +Y ++
Sbjct: 622 YGFHGQGEEALKLFYQMANHSDTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLK 681
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+EHY MV LLG G L+ A I ++P P + GALL C I+ N + E+ A
Sbjct: 682 PNSEHYAIMVDLLGRMGELDMALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKN 741
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
LF DP Y ++LSN Y+ D W KLR + + L K G S V
Sbjct: 742 LFSLDPNHAGYYILLSNIYSVDENWHSATKLRRLVKEKRLNKIVGQSVVE 791
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/442 (28%), Positives = 223/442 (50%), Gaps = 20/442 (4%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
NL +LE S S+S +LH+ KA L+ D F TKL LYA + A LF +
Sbjct: 140 NLLVKLLETCCSKLSIS---QLHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQE 196
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-----LRTQLKPDNFTYACITRACSENS 118
TP R+V+LWN+++R+Y + + SLF+ + + + +PDN++ + ++C+
Sbjct: 197 TPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLR 256
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
L + +HG + D SAL+ Y+K +++A+KVF PD+VL S+IS
Sbjct: 257 KLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIIS 316
Query: 179 GFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G+ G + +L F M+ K +PD TLV + S + S +G+ +HGF + D
Sbjct: 317 GYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLD 376
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ +++ L+ +Y + + +A ++F + D+++WS ++ Y+ G L F ++
Sbjct: 377 NKLCLANSLLHLYGKTGSIKNASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEM 436
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ K + V + SVL A A +N+ G IH + +GFE+ VS+AL+DMY KC
Sbjct: 437 LDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMYMKCFSP 496
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL--- 414
+ +F M ++++I + + G +G +++ FR+++ G PD +L
Sbjct: 497 EKAVDLFNRMPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDAIALVKILTTI 556
Query: 415 --------CACCHGGLVNDGRE 428
C H ++ +G E
Sbjct: 557 SELGILQQAVCLHAFVIKNGFE 578
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 176/352 (50%), Gaps = 7/352 (1%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H + +GL DS + L Y++ + I A K+F + L N+++ + G
Sbjct: 158 LHSQCLKAGLVHDSFIVTKLNVLYARYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGE 217
Query: 186 WDKSLQLFDWM-----LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
W ++L LF M + + + PD Y++ + L +G+ IHGF K D
Sbjct: 218 WVETLSLFRQMNNVSSVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDM 277
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+V S L+ +Y +C MN A VF PD+V W+++I+GY Q G AL +F ++ +
Sbjct: 278 FVGSALIDLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELALAFFSRMVVS 337
Query: 301 GK-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
K DPV + SV +A A+ +N G +HG+V + G + + ++++L+ +Y K G +
Sbjct: 338 EKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKN 397
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+F MS+++II++++++ +G + F ++++K + P+ T ++L AC
Sbjct: 398 ASNLFREMSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWVTVVSVLRACAC 457
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+ +G +I + YG + +T ++ + + E+A +PK
Sbjct: 458 ISNLEEGMKIH-ELAVNYGFEMETTVSTALMDMYMKCFSPEKAVDLFNRMPK 508
>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g39530-like [Brachypodium distachyon]
Length = 822
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 262/531 (49%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L ++ H + ++ D L+ LY + L AR LFD R++ W ++I
Sbjct: 231 LEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAG 290
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y +A ++F L + +PD F A I +C + + R VH AI + L D
Sbjct: 291 YMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESD 350
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++L+ Y+K + EA VF+ +++ D + N+MI G++ G ++ +F M
Sbjct: 351 EYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRY 410
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
P T V L+ S + + + IHG +KS Y S L+ +Y++ + +
Sbjct: 411 CSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVED 470
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VFN + + D+V W+A+I G +Q +A+ F +L + G + +++ A+
Sbjct: 471 AKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVAST 530
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+++ G H +I+ G + VS+AL+DMY+KCG++ G +FE+ +++I +NS+
Sbjct: 531 LVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGKDVICWNSM 590
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I HG +A FR + G+ P+ TF +L AC H GLV++G F M +Y
Sbjct: 591 ISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYA 650
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ TEHY +V L G +G L A FI +P AV +LLS CH++GN ++
Sbjct: 651 IEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFGNVEIGRYAT 710
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP V++SN YA G W D KLR + G+ KE G SW+
Sbjct: 711 EMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCAGVVKEPGYSWI 761
Score = 186 bits (472), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 116/391 (29%), Positives = 196/391 (50%), Gaps = 2/391 (0%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
HA L D F A L+R Y+ + AR LFD+ P +++ W S I +A
Sbjct: 34 HARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQHGCE 93
Query: 86 NDAKSLFKNLLRTQ--LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
DA +LF R P+ F A RAC+++ + + VHG A+ GL + +
Sbjct: 94 EDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGT 153
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
AL+ Y+K+ ID A+ VFD + + V ++I+G++ G +L+LF M G P
Sbjct: 154 ALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRP 213
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D + L +S L G+ HG+ + + ++ V + L+ +Y +C+ ++ A +F
Sbjct: 214 DRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLARKLF 273
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + + +LV+W+ +I GY Q +A+ F +L+ +G + D AS+L + A +W
Sbjct: 274 DCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIW 333
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +H + I+ E V ++L+DMY+KC +L VFE ++E + I+YN++I G
Sbjct: 334 QGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYS 393
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G A + F + L P TF +LL
Sbjct: 394 RLGDLAGAIDVFSKMRYCSLKPSPLTFVSLL 424
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 203/398 (51%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++S +++H + + L + + T L+ LYA + +A ++FD P ++ W ++I
Sbjct: 128 RAVSFGQQVHGVAVRIGLDGNVYVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVI 187
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + A LF + ++PD F A ACS L G R HG A +
Sbjct: 188 TGYSQIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVE 247
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ +AL+ Y K S + A K+FD + + +LV +MI+G+ +++ +F +
Sbjct: 248 TDASVINALIDLYCKCSRLSLARKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQL 307
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G PD + +++ + + G+ +H +K++ +S +YV + L+ MYA+C +
Sbjct: 308 SQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHL 367
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF +L D ++++A+I GYS+ GD A+ F K+ K P+ S+L +
Sbjct: 368 TEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVS 427
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ + + IHG +++ G L + S+L+D+YSK + VF M R+++ +N
Sbjct: 428 SSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWN 487
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
++I GL + +A + F + GL P+E TF AL+
Sbjct: 488 AMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALV 525
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/362 (29%), Positives = 186/362 (51%), Gaps = 13/362 (3%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
L H A+V+G D ++ L+ AYSKL + +A ++FD + +LV S IS A
Sbjct: 30 LPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHKNLVSWGSAISMHAQ 89
Query: 183 CGFWDKSLQLFDWMLRL--GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G + ++ LF R G+ P+E+ L + + +S GQ +HG ++ D
Sbjct: 90 HGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNV 149
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
YV + L+++YA+ C+++A VF++L + VTW+A+ITGYSQ G G AL F K+ +
Sbjct: 150 YVGTALINLYAKVGCIDAAMLVFDALPVKNPVTWTAVITGYSQIGQGGVALELFGKMGLD 209
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + D ++AS ++A + + G HGY + E V +AL+D+Y KC L L
Sbjct: 210 GVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDASVINALIDLYCKCSRLSLA 269
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++F+ M RN++++ ++I G + +A F + ++G PD +++L +C
Sbjct: 270 RKLFDCMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSL 329
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
+ GR++ + I+A E Y ++ + +L EA + +L + D A
Sbjct: 330 AAIWQGRQVHA-----HAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAE--DDA 382
Query: 477 VS 478
+S
Sbjct: 383 IS 384
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 182/362 (50%), Gaps = 5/362 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S ++ + +++HA KA+L D + L+ +YA L AR +F+ +
Sbjct: 322 ILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHLTEARAVFEALAEDD 381
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+N++I Y+ A +F + LKP T+ + S S + + +HG
Sbjct: 382 AISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHG 441
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SG D S+L+ YSK SL+++A VF+ + + D+V+ N+MI G A ++
Sbjct: 442 LIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEE 501
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV--GQGIHGFCLKSSFDSYDYVSSVL 246
+++LF+ + G P+E+T V L++ +L+S+ GQ H +K+ DS +VS+ L
Sbjct: 502 AVKLFNQLQVSGLAPNEFTFVALVT--VASTLVSMFHGQQFHAQIIKAGADSDHHVSNAL 559
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+C + +F S D++ W+++I+ Y+Q G +ALY FR + G + +
Sbjct: 560 IDMYAKCGFIKEGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNY 619
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V VL+A A + V G ++ ++ E +++V+++ + G L + E
Sbjct: 620 VTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIE 679
Query: 366 TM 367
M
Sbjct: 680 RM 681
>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g13650-like [Cucumis sativus]
Length = 1037
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 271/532 (50%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +LH+ KA + D L+ LY+ + +A F T ++ LWN ++
Sbjct: 377 ALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLV 436
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY +D+ +F+ + + P+ FTY I R C+ L +H I +G
Sbjct: 437 AYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQL 496
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ S L+ Y+K + A+++ + + D+V +MI+G+ + ++LQLF+ M
Sbjct: 497 NVYVCSVLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEME 556
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G D IS L GQ IH + F + +++ L+S+YARC +
Sbjct: 557 YRGIQFDNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQ 616
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY F + + ++W++L++G +Q G + +AL F ++ + + S ++AAA
Sbjct: 617 EAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAA 676
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
AN+ G IH V++ G++ VS++L+ +Y+K G + + F MSERN+I++N+
Sbjct: 677 SLANIKQGQQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMSERNVISWNA 736
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G HG +A F ++ G+ P+ TF +L AC H GLV +G + F M + +
Sbjct: 737 MITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFVGVLSACSHIGLVKEGLDYFESMFKIH 796
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
+ K+EHY+ +V LLG AG L+ A +I +P P D + LLS C I+ N ++ E
Sbjct: 797 DLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPIPADAMIWRTLLSACVIHKNIEIGERA 856
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
AH L E +P A V++SN YA +W R + D G++KE G SW+
Sbjct: 857 AHHLLELEPEDSATYVLISNIYAVSRQWIHRDWSRKLMKDXGVKKEPGRSWI 908
Score = 184 bits (468), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 226/471 (47%), Gaps = 4/471 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+LE + SL T LH ++K+ +P LV Y + A +FD+ RS
Sbjct: 64 LLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLVDNYFRHGDQHGAVKVFDENSNRS 123
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC-SENSDLPGLRFVH 127
VF WN +I + LF+ +L + P+ +T+A + +AC + ++ VH
Sbjct: 124 VFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVH 183
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G + ++ L+ YSK I+ A KVF+ + D+V +MISG + G +
Sbjct: 184 SRTFYYGFDSSPLVANLLIDLYSKNGYIESAKKVFNCICMKDIVTWVAMISGLSQNGLEE 243
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ LF M P Y L ++S + L +G+ +H +K F S YV + LV
Sbjct: 244 EAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLV 303
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
++Y+R + SA +F+++ D V++++LI+G QQG +AL F K+ K D +
Sbjct: 304 ALYSRSRKLISAERIFSTMNSRDGVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCI 363
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+AS+L+A A + G +H + I+ G +++ +L+D+YSKC + + F
Sbjct: 364 TVASLLSACASVGALHKGMQLHSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXT 423
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
NI+ +N +++ G +FE FR + +G+ P++ T+ ++L C G + G
Sbjct: 424 ETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGE 483
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
+I T + + G Q ++ + G L A + LP+ D VS
Sbjct: 484 QIHTHVIKT-GFQLNVYVCSVLIDMYAKYGQLALALRILRRLPE--DDVVS 531
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/455 (26%), Positives = 214/455 (47%), Gaps = 1/455 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S Q ++LH LV K + + LV LY+ + L SA +F R
Sbjct: 267 VLSASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSRKLISAERIFSTMNSRD 326
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+NS+I + A LF + R LKPD T A + AC+ L +H
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI +G+ D I +L+ YSK + ++ A K F ++VL N M+ +
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNLSD 446
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
S ++F M G P+++T ++ L +G+ IH +K+ F YV SVL+
Sbjct: 447 SFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVLID 506
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ + A + L D+V+W+A+I GY Q + +AL F ++ +G + D +
Sbjct: 507 MYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDNIG 566
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
AS ++A A + G IH GF + +++AL+ +Y++CG + FE +
Sbjct: 567 FASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEKIG 626
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++N I++NS++ GL G+ +A + F ++ + T+ + + A + G++
Sbjct: 627 DKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQ 686
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
I + M + G ++ E ++ L +G++ +A+
Sbjct: 687 IHS-MVLKTGYDSEREVSNSLISLYAKSGSISDAW 720
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 14/263 (5%)
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K +QL ++M G + + L+ G L +H KS FD + LV
Sbjct: 41 KRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGEPLLIDSLV 100
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
Y R + A VF+ + + +W+ +I + Q + FR++ +G +
Sbjct: 101 DNYFRHGDQHGAVKVFDENSNRSVFSWNKMIHVFVAQKSNFQVFCLFRRMLAEGITPNGY 160
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQ-------HGFELSVMVSSALVDMYSKCGYLGLG 360
A VL A G + YV Q +GF+ S +V++ L+D+YSK GY+
Sbjct: 161 TFAGVLKACV------GGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNGYIESA 214
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF + ++I+T+ ++I GL +G +A F D+ + P S++L A
Sbjct: 215 KKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKI 274
Query: 421 GLVNDGREIFTRMTEEYGIQAKT 443
L G ++ + ++G ++T
Sbjct: 275 QLFELGEQLHC-LVIKWGFHSET 296
>gi|449450476|ref|XP_004142988.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g33680-like [Cucumis sativus]
Length = 692
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 169/526 (32%), Positives = 257/526 (48%), Gaps = 18/526 (3%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+ HAL K S D F + L+ +Y + AR +FD P+R+ W +II YA+
Sbjct: 134 QAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMER 193
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A LF + R + D F Y + A + + + +H A+ +GL + +
Sbjct: 194 MAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGN 253
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
ALVT Y K +D+A K F+ D D + ++MI+G+A G ++L LF M G P
Sbjct: 254 ALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKP 313
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
E+T VG+I+ + L G+ IHG+ LK+ ++ Y + A+C + A F
Sbjct: 314 SEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGF 373
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L PD+V W++ ++ M+ + +ASVL A + A +
Sbjct: 374 DYLKEPDIVLWTSC------------------RMQMERIMPHELTMASVLRACSSLAALE 415
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IH I++GF L V + SAL MY+KCG L G VF M R+I+T+N++I GL
Sbjct: 416 QGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRDIMTWNAMISGLS 475
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+G +A E F ++ PD TF +L AC H GLV G+ F M +E+GI +
Sbjct: 476 QNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMMLDEFGIIPRV 535
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY MV +L AG L E FI S + LL C Y N +L +L E
Sbjct: 536 EHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRNYELGAYAGEKLME 595
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ + ++LS+ Y GR DDV ++R + G+ KE G SW+
Sbjct: 596 LGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWI 641
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 114/457 (24%), Positives = 206/457 (45%), Gaps = 21/457 (4%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
+ L + K +HA + + + LV LYA + A+++F+ + V WN +
Sbjct: 23 QKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLVFESITNKDVVSWNCL 82
Query: 76 IRAYALAHR--FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
I Y+ ++ LF+ + P+ T++ + A S + + G H AI +
Sbjct: 83 INGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPETFGGLQAHALAIKT 142
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
D S+L+ Y K+ + +A KVFD + + + V ++ISG+A ++ +LF
Sbjct: 143 SNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIISGYAMERMAFEAWELF 202
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
M R D++ ++S L P L+ G+ IH LK+ S V + LV+MY +C
Sbjct: 203 LLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLLSIASVGNALVTMYGKC 262
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
C++ A+ F D +TWSA+ITGY+Q GD +AL F +++ G K V+
Sbjct: 263 GCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYNMHLNGNKPSEFTFVGVI 322
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A + + G IHGY ++ G+E + + +KCG L + F+ + E +I+
Sbjct: 323 NACSDIGALEEGKQIHGYSLKAGYECQIYFRKGFDYLKAKCGSLVDARKGFDYLKEPDIV 382
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ S + + + + P E T +++L AC + G++I +
Sbjct: 383 LWTSCRMQM------------------ERIMPHELTMASVLRACSSLAALEQGKQIHAQ- 423
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
T +YG + + + G+LE+ +P
Sbjct: 424 TIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMP 460
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/355 (27%), Positives = 172/355 (48%), Gaps = 9/355 (2%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L P + ++ + C+ DL + +H + +G +++LV Y+K I +A
Sbjct: 6 LPPQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAK 65
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKS--LQLFDWMLRLGKTPDEYTLVGLISGLWE 217
VF+ +++ D+V N +I+G++ G S ++LF M P+ +T G+ +
Sbjct: 66 LVFESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASS 125
Query: 218 PSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
G H +K+S + YD +V S L++MY + CM A VF+++ + V+W+
Sbjct: 126 SPETFGGLQAHALAIKTS-NFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWAT 184
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+GY+ + +A F + + D + SVL+A V G IH +++G
Sbjct: 185 IISGYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
V +ALV MY KCG L + FE +++ IT++++I G G +++A F
Sbjct: 245 LLSIASVGNALVTMYGKCGCLDDAFKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFY 304
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
++ G P E TF ++ AC G + +G++I Y ++A E IY K
Sbjct: 305 NMHLNGNKPSEFTFVGVINACSDIGALEEGKQI-----HGYSLKAGYECQIYFRK 354
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 134/263 (50%), Gaps = 3/263 (1%)
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P + V L+ L G+ IH L++ S Y+++ LV++YA+C + A V
Sbjct: 8 PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKA--LYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
F S+ + D+V+W+ LI GYSQ+G G + + F+++ + + + V AA+ S
Sbjct: 68 FESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSP 127
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G H I+ V V S+L++MY K G + +VF+T+ ERN +++ ++I
Sbjct: 128 ETFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTIPERNTVSWATIIS 187
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G + ++A+E F + + D+ ++++L A LV+ G++I + + G+
Sbjct: 188 GYAMERMAFEAWELFLLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHC-LALKNGLL 246
Query: 441 AKTEHYIYMVKLLGLAGNLEEAY 463
+ +V + G G L++A+
Sbjct: 247 SIASVGNALVTMYGKCGCLDDAF 269
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 46/107 (42%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L + K++HA K + + L +YA L ++F + P R
Sbjct: 404 VLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 463
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ WN++I + A LF+ L KPD T+ + ACS
Sbjct: 464 IMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACS 510
>gi|297823163|ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325303|gb|EFH55723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 713
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 167/555 (30%), Positives = 280/555 (50%), Gaps = 37/555 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+ + S QS + ++ HALV K S D + T LV +Y K +
Sbjct: 126 IFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYC-------------KAGLKY 172
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD-------------NFTYACITRACS 115
+++ + + L ++ K++LR QLK ++ + + + +
Sbjct: 173 LYM---VYYGFWLCYK--------KDVLRRQLKSSICFLEEKEKESDSDYVFTAVLSSLA 221
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
+ R +HG + +GL S+ALVT YSK ++EA K+FD D + + ++
Sbjct: 222 ATVYVGLGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSA 281
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
M++G++ G ++++LF M G P EYT+VG+++ + L G+ +H F LK
Sbjct: 282 MVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHSFLLKLG 341
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
F+ + + ++ LV MYA+ C+ A F+ L D+ W++LI+GY Q D +AL +R
Sbjct: 342 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 401
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ G + +ASVL A + A + G +HG+ I+HGF L V + SAL MY+KCG
Sbjct: 402 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYTKCG 461
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
L G VF ++++++N++I GL +G +A E F +++ +G PD+ TF ++
Sbjct: 462 SLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIIS 521
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H G V G F M++++G+ K +HY MV +L AG L+E FI S
Sbjct: 522 ACSHKGFVERGWSYFHMMSDQFGLDPKVDHYACMVDVLSRAGQLKETKEFIESASIDHGL 581
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ LLS C +GN +L +L R+ + V L+ Y GR DV ++ +
Sbjct: 582 CLWRILLSACKNHGNCELGVYAGEKLMSLGSRESSTYVQLAGIYTALGRMRDVERVWKLM 641
Query: 536 VDNGLRKEAGVSWVS 550
NG+ KE G SW++
Sbjct: 642 RTNGVSKEVGCSWIA 656
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 194/419 (46%), Gaps = 18/419 (4%)
Query: 16 HQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
H++L + +HA + + +A LV YA L A +F+ + V WNS+
Sbjct: 29 HRNLVAGRAVHAQIIRTGTSTCTQHANVLVNFYAKCGQLAKAHSIFNAIICKDVVSWNSL 88
Query: 76 IRAYALAHRFNDAKS---LFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
I Y+ + + + LF+ + + P+ +T A I +A S R H +
Sbjct: 89 ITGYSQNGGISSSHTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSCTVGRQAHALVVK 148
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDG--VSDPDLVLCNSMISGFAHCGFWDKSL 190
D ++LV Y K L V+ G + VL + S C +K
Sbjct: 149 MSSFGDIYVDTSLVGMYCKAGL-KYLYMVYYGFWLCYKKDVLRRQLKSSI--CFLEEKEK 205
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+ + +Y ++S L + +G+ IHG +K+ + +S+ LV+MY
Sbjct: 206 E----------SDSDYVFTAVLSSLAATVYVGLGRQIHGITVKNGLLGFVALSNALVTMY 255
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
++C +N A +F+S + +TWSA++TGYSQ G+ +A+ F ++ G K I
Sbjct: 256 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAIKLFSRMFSAGIKPSEYTIV 315
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
VL A + + G +H ++++ GFE + ++ALVDMY+K G L + F+ + ER
Sbjct: 316 GVLNACSDICYLVEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 375
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ + S+I G + +A +R + G+ P++ T +++L AC + G+++
Sbjct: 376 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQV 434
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 163/348 (46%), Gaps = 20/348 (5%)
Query: 91 LFKNLLRTQLKPDNFTYACITRAC--SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
++ + +T++ P + T + S++ +L R VH I +G + ++ LV
Sbjct: 1 MYPSTFQTEINPFSHTSTLLKALTHHSQHRNLVAGRAVHAQIIRTGTSTCTQHANVLVNF 60
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS---LQLFDWMLRLGKTPDE 205
Y+K + +A +F+ + D+V NS+I+G++ G S +QLF M P+
Sbjct: 61 YAKCGQLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSHTVMQLFREMRAQDILPNA 120
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC--MNSAYHVF 263
YTL G+ +VG+ H +K S YV + LV MY + + Y+ F
Sbjct: 121 YTLAGIFKAESSLQSCTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLKYLYMVYYGF 180
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ D++ K+ F + + +D V A VL++ A + V
Sbjct: 181 WLCYKKDVLRRQL------------KSSICFLEEKEKESDSDYVFTA-VLSSLAATVYVG 227
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IHG +++G V +S+ALV MYSKC L ++F++ +RN IT+++++ G
Sbjct: 228 LGRQIHGITVKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYS 287
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+G + +A + F + G+ P E T +L AC + +G+++ +
Sbjct: 288 QNGESLEAIKLFSRMFSAGIKPSEYTIVGVLNACSDICYLVEGKQLHS 335
>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 159/528 (30%), Positives = 263/528 (49%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHA V K D F T L+ Y++ + AR +FD + + W ++ YA
Sbjct: 158 LHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCF 217
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ ++ LF + KP+NFT + ++C + VHG A+ D A
Sbjct: 218 YEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIA 277
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K I +A ++F+ + DL+ + MI+ +A ++L LF M + P+
Sbjct: 278 LLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+T ++ L +G+ IH LK +S +VS+ ++ +YA+C + ++ +F
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFE 397
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L + VTW+ +I GY Q GD +A+ F + + V +SVL A+A A + P
Sbjct: 398 ELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEP 457
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH I+ + +V+++L+DMY+KCG + F+ M++R+ +++N++I G +
Sbjct: 458 GLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSM 517
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG + +A F + P++ TF +L AC + GL+ G+ F M+++Y I+ E
Sbjct: 518 HGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIE 577
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV LLG G +EA I + V ALL C I+ DL + A + E
Sbjct: 578 HYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEM 637
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
+P A V+LSN YA GRWD+V +R + +RKE G+SWV
Sbjct: 638 EPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVENQ 685
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 205/410 (50%), Gaps = 2/410 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH + K D F L+ Y +N L A LFD+ PQ + + ++ + Y+
Sbjct: 55 KHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRD 114
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSIT 141
H+F+ A + + + + F + + + + DL L + +H G D+
Sbjct: 115 HQFHQALHFILRIFKEGHEVNPFVFTTLLKLLV-SMDLAHLCWTLHACVYKLGHHADAFV 173
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+AL+ AYS +D A VFD + D+V M++ +A F+++SLQLF+ M +G
Sbjct: 174 GTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAENCFYEESLQLFNQMRIMGY 233
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ +T+ G + +VG+ +HG LK +D +V L+ +YA+ + A
Sbjct: 234 KPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQR 293
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F + DL+ WS +I Y+Q +AL F ++ + ASVL A A S +
Sbjct: 294 LFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVS 353
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IH V++ G +V VS+A++D+Y+KCG + +++FE + +RN +T+N++I+G
Sbjct: 354 LDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVG 413
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
G +A F ++E + P E T+S++L A + G +I +
Sbjct: 414 YVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHS 463
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 154/303 (50%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K +H K D F L+ LYA + + A+ LF++ P+ + W+ +I YA +
Sbjct: 257 KSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQS 316
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R +A LF + +T + P+NFT+A + +AC+ + L + +H + GL + S
Sbjct: 317 DRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVS 376
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A++ Y+K I+ ++K+F+ + D + V N++I G+ G ++++ LF ML
Sbjct: 377 NAIMDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQ 436
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P E T ++ + L G IH +K+ ++ V++ L+ MYA+C +N A
Sbjct: 437 PTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLT 496
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D V+W+A+I GYS G +AL F + K + + VL+A + + +
Sbjct: 497 FDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLL 556
Query: 323 WPG 325
+ G
Sbjct: 557 YKG 559
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 154/320 (48%), Gaps = 8/320 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S SL K++H+ V K L + F + ++ +YA + ++ LF++ P R+
Sbjct: 344 VLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRN 403
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
WN+II Y A +LF ++L ++P TY+ + RA + + L PGL+ +H
Sbjct: 404 DVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQ-IH 462
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
I + +D++ +++L+ Y+K I++A FD ++ D V N+MI G++ G
Sbjct: 463 SLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKRDEVSWNAMICGYSMHGMSM 522
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SV 245
++L LFD M P++ T VG++S LL GQ H + +D + +
Sbjct: 523 EALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQA-HFESMSKDYDIKPCIEHYTC 581
Query: 246 LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITG--YSQQGDYGKALYYFRKLNMQGK 302
+V + R + A + + + P ++ W AL+ ++ D G+
Sbjct: 582 MVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHD 641
Query: 303 KADPVLIASVLAAAAKSANV 322
A VL++++ A A + NV
Sbjct: 642 DATHVLLSNMYATAGRWDNV 661
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/373 (18%), Positives = 169/373 (45%), Gaps = 2/373 (0%)
Query: 103 DNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
D+ +YA + + N P + +H + G D + L+ Y + + + +A K+
Sbjct: 33 DSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKL 92
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FD + + + ++ G++ + ++L + + G + + L+ L L
Sbjct: 93 FDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDLA 152
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+ +H K + +V + L+ Y+ ++ A HVF+ + D+V+W+ ++ Y
Sbjct: 153 HLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACY 212
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
++ Y ++L F ++ + G K + I+ L + G +HG ++ ++ +
Sbjct: 213 AENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDL 272
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V AL+++Y+K G + ++FE M + ++I ++ +I + +A + F + +
Sbjct: 273 FVGIALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQT 332
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
+ P+ TF+++L AC ++ G++I + + ++G+ + ++ + G +E
Sbjct: 333 SVVPNNFTFASVLQACASSVSLDLGKQIHSCVL-KFGLNSNVFVSNAIMDVYAKCGEIEN 391
Query: 462 AYSFIWSLPKPVD 474
+ LP D
Sbjct: 392 SMKLFEELPDRND 404
>gi|224106537|ref|XP_002314200.1| predicted protein [Populus trichocarpa]
gi|222850608|gb|EEE88155.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 276/530 (52%), Gaps = 6/530 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H L+ ++ L L+ +Y N + S ++F K R V WN++ +++
Sbjct: 276 RQIHGLIIRSELELSAPVMNALMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQH 335
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE--NSDLPGLRFVHGGAIVSGLGRDSI 140
D SLF + L T ++P++ T++ + R C + N DL GL+F A+ GL ++
Sbjct: 336 EDPKDIASLFHSFLLTSMRPNHITFSILFRECGKLLNLDL-GLQFC-CLALHFGLFDEAN 393
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+SAL+ +S+ ++ A VF ++++ N +ISG+ ++L+ F +L+LG
Sbjct: 394 ITSALINMFSRCGKMEMAHLVFKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLG 453
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+EYT ++ + + IHG KS F S+ YV S L+ Y +C ++ +
Sbjct: 454 VEANEYTFSNVLETCSRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSL 513
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VFN L PD+ W +I+ + QG +A+ L G+K D ++ S+L++ A +
Sbjct: 514 KVFNMLDRPDMAAWGTMISAFVHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSCASTV 573
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVI 379
+H +I+ GFE V V+SA++D Y+KCG + F ++ +++ YN++I
Sbjct: 574 AYCQTKSVHSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAKMAFNQSCKSSDVVIYNAMI 633
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
+ HG +A + + + L P ++TF +++ AC H G V G +F M + YG+
Sbjct: 634 IAYAHHGRVVEALDTYDKMKLANLQPSQATFVSVIAACGHIGHVEKGCRLFKSM-DLYGM 692
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ + Y +V + G LE+A I SLP P PA+ +LLS C +YGN +L E A
Sbjct: 693 EPSPDIYGCLVDMFSRNGYLEDAKQIIESLPYPAWPAILRSLLSGCRMYGNRELGEWAAK 752
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L + P A +L Y+E G W+D K+R ++ + GLRK+ G SW+
Sbjct: 753 KLLQLVPHNDAAHALLFKVYSELGNWEDAAKMRREMAERGLRKDPGHSWI 802
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 190/411 (46%), Gaps = 5/411 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L ++ +S ++H + K D F + L++ YA VL +FD +R+V
Sbjct: 60 LSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNV 119
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---V 126
W ++ +F ++R P+ F + +AC + + G F V
Sbjct: 120 VSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKAC--GNSVEGRVFGLCV 177
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H A+ G+ R+ S ++++ Y+KL I A +VF+ + + D+ N+MI G+A CG+
Sbjct: 178 HCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYG 237
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+++ M R G D+YT + +I G + G+ IHG ++S + V + L
Sbjct: 238 FEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNAL 297
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY + M S VF + D+VTW+ + +SQ D F + + +
Sbjct: 298 MDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPNH 357
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ + + K N+ G + G ++SAL++M+S+CG + + VF++
Sbjct: 358 ITFSILFRECGKLLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLVFKS 417
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
NII +N +I G L+ +A + F D+++ G+ +E TFS +L C
Sbjct: 418 KVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETC 468
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 176/395 (44%), Gaps = 4/395 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H K + R+PF + ++ YA + +A +F+ + V WN++I YA
Sbjct: 177 VHCFALKIGMERNPFVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGY 236
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A + R + D +T+ + + CS D R +HG I S L + +A
Sbjct: 237 GFEAIVTASLMRRKGIFMDKYTFINVIQGCSLLGDFNFGRQIHGLIIRSELELSAPVMNA 296
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K + + VF + D D+V N++ F+ LF L P+
Sbjct: 297 LMDMYFKNGGMKSGLVVFKKMHDRDVVTWNTVFGSFSQHEDPKDIASLFHSFLLTSMRPN 356
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY--VSSVLVSMYARCNCMNSAYHV 262
T L + LL++ G+ CL F +D ++S L++M++RC M A+ V
Sbjct: 357 HITFSILFRECGK--LLNLDLGLQFCCLALHFGLFDEANITSALINMFSRCGKMEMAHLV 414
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F S +++ W+ LI+GY +AL F L G +A+ ++VL ++S N
Sbjct: 415 FKSKVSENIIIWNELISGYKLNCCDAEALKTFYDLLQLGVEANEYTFSNVLETCSRSENQ 474
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
IHG + GF V S+L+ Y KCG L ++VF + ++ + ++I
Sbjct: 475 LMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPDMAAWGTMISAF 534
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G+ +A +IE G PDE ++L +C
Sbjct: 535 VHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSC 569
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G IHG+ +K F S +VS+ L+ YA+ + ++VF+ + ++V+W+ ++ G
Sbjct: 71 LGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVFDGMLERNVVSWTLMVCGAI 130
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFELSV 341
Q + L F ++ G + + SV+ A S G +H + ++ G E +
Sbjct: 131 QCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKACGNSVEGRVFGLCVHCFALKIGMERNP 190
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
VS +++ Y+K G +G +VFE++ E ++ +N++I G G+ ++A + K
Sbjct: 191 FVSCSVLSFYAKLGDIGAAERVFESLEEVDVGCWNAMIGGYAQCGYGFEAIVTASLMRRK 250
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREI 429
G+ D+ TF ++ C G N GR+I
Sbjct: 251 GIFMDKYTFINVIQGCSLLGDFNFGRQI 278
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 116/278 (41%), Gaps = 18/278 (6%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VLE ++ +++H + K+ + + L++ Y +L + +F+ +
Sbjct: 464 VLETCSRSENQLMNRQIHGVAFKSGFASHGYVCSSLIKGYIKCGLLDDSLKVFNMLDRPD 523
Query: 69 VFLWNSIIRAYALAHRFNDAKSL--FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+ W ++I A+ H+ D +++ L+ KPD F I +C+ + V
Sbjct: 524 MAAWGTMISAF--VHQGWDCEAIRSLNLLIEAGEKPDEFILGSILSSCASTVAYCQTKSV 581
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD-GVSDPDLVLCNSMISGFAHCGF 185
H I G +SA++ AY+K I A F+ D+V+ N+MI +AH G
Sbjct: 582 HSLIIKLGFEGHVFVASAVLDAYAKCGDIQSAKMAFNQSCKSSDVVIYNAMIIAYAHHGR 641
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS- 244
++L +D M P + T V +I+ +G G L S D Y S
Sbjct: 642 VVEALDTYDKMKLANLQPSQATFVSVIAACGH-----IGHVEKGCRLFKSMDLYGMEPSP 696
Query: 245 ----VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
LV M++R + A + SL +P W A++
Sbjct: 697 DIYGCLVDMFSRNGYLEDAKQIIESLPYP---AWPAIL 731
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%)
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D V ++ L+ S + G IHGY+I+ GF V VS+ L+ Y+K L G VF
Sbjct: 52 DSVALSKALSFCENSKSFILGTQIHGYIIKLGFSSDVFVSNNLIKFYAKGAVLRYGFNVF 111
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ M ERN++++ ++ G E F ++I G P+E +++ AC
Sbjct: 112 DGMLERNVVSWTLMVCGAIQCEEVELGLEVFLEMIRDGFVPNEFGLGSVMKAC 164
>gi|225454363|ref|XP_002276073.1| PREDICTED: pentatricopeptide repeat-containing protein At2g46050,
mitochondrial [Vitis vinifera]
Length = 673
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/544 (29%), Positives = 272/544 (50%), Gaps = 4/544 (0%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L++S L K+LHA V K +++ +Y +FD+ P ++V
Sbjct: 80 LKISAKLGFLHGGKQLHAHVIKLGNCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNV 139
Query: 70 FLWNSIIRAYALAH-RFNDAK---SLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
WN++I + +F + F+ ++ + P+ T + RA E +D+ R
Sbjct: 140 VSWNTLICGVVEGNCKFALVRLGFHYFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQ 199
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H + SG + SALV +Y+K L+DEA FD VS DLVL N M+S +A G
Sbjct: 200 LHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGV 259
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
K+ +F M G D +T +I+ +G+ +HG ++ SFD V+S
Sbjct: 260 QGKAFGVFKLMRLEGVKGDNFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASA 319
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MY++ + A F+ + ++V+W+ +I GY Q GD +A+ +++ D
Sbjct: 320 LVDMYSKNENIEDARKAFDGMIVKNIVSWTTMIVGYGQHGDGKEAMRLLQEMIRVYTYPD 379
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ +AS+L++ + +H YV+++GFE + +++ALV YSKCG +G Q F
Sbjct: 380 ELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFS 439
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+++E +II++ S++ HG + + E F ++ + PD+ F +L AC HGG V +
Sbjct: 440 SVAEPDIISWTSLMGAYAFHGLSKEGVEVFEKMLFSNVRPDKVAFLGVLSACAHGGFVLE 499
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G F M Y I +EHY ++ LLG AG L+EA + + S+P GA L C
Sbjct: 500 GLHYFNLMINVYQIMPDSEHYTCIIDLLGRAGFLDEAINLLTSMPVEPRSDTLGAFLGAC 559
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++ N LA + +LF +P + A ++SN YA G W DV ++R + + K G
Sbjct: 560 KVHRNVGLARWASEKLFVMEPNEPANYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPG 619
Query: 546 VSWV 549
SW+
Sbjct: 620 CSWM 623
>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
Length = 720
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/558 (30%), Positives = 281/558 (50%), Gaps = 23/558 (4%)
Query: 2 FFNLHFLVLE-----LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS 56
+ + HF++L L+ +H + ++T E + F L+ YA +++
Sbjct: 44 YLSNHFILLYSKCNLLTTAHHAFNQTHE-----------PNVFSFNALIAAYAKESLIHV 92
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
A LFD+ PQ + +N++I AYA A SLF + L D FT++ + AC
Sbjct: 93 AHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTFSGVITACCN 152
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP--DLVLCN 174
+ L +R +H A SG ++L+T YSK +++EA VF+G+ + D V N
Sbjct: 153 HVGL--IRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGEEVRDEVSWN 210
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
SMI + K+L L+ M+ G D +TL +++ LS G H +K+
Sbjct: 211 SMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVEDLSGGLQFHAKAIKT 270
Query: 235 SFDSYDYVSSVLVSMYARCNC-MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALY 292
F+ +V S L+ MYA+C M+ + VF + DLV W+ +I+GYSQ + +AL
Sbjct: 271 GFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVVWNTMISGYSQNKELSVEALE 330
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMY 351
FR++ G D ++A + ++ G H ++ + + V++ALV MY
Sbjct: 331 CFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALAMKSEIPSNQISVNNALVTMY 390
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
SKCG L ++F+ M + N +T NS+I G HG ++ F ++ + P T
Sbjct: 391 SKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTESLNLFEQMLAASIAPTSITLV 450
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
++L AC H G V +G++ F M + +GI+ + EHY M+ LLG AG L EA I ++P
Sbjct: 451 SILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMIDLLGRAGKLSEAERLIDTMPF 510
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
A ALL C YGN +LAE A+Q + +P +ML++ Y+ +W++ ++
Sbjct: 511 SPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVPYIMLASMYSAARKWEEAARI 570
Query: 532 RDDIVDNGLRKEAGVSWV 549
R + D G+RK+ G SW+
Sbjct: 571 RKLMRDRGIRKKPGCSWI 588
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 103/227 (45%), Gaps = 35/227 (15%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN---------------- 264
L G+ +H LKS S Y+S+ + +Y++CN + +A+H FN
Sbjct: 24 LLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFNQTHEPNVFSFNALIAA 83
Query: 265 ----SLFH-----------PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
SL H PDLV+++ LI Y+ +GD AL F ++ G D
Sbjct: 84 YAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLVMDGFTF 143
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+ V+ A + +H GF+ V V ++L+ YSK G L VF M E
Sbjct: 144 SGVITACCNHVGLIRQ--LHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMVFNGMGE 201
Query: 370 --RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
R+ +++NS+I+ G H +A +RD++ +G D T +++L
Sbjct: 202 EVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVL 248
>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
Length = 1026
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/529 (31%), Positives = 266/529 (50%), Gaps = 4/529 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH+++ K + F LV +YA + L AR F+ R WN II Y
Sbjct: 449 QLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEE 508
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+A LF+ + + PD + A I AC+ L + VH ++ +G + S
Sbjct: 509 DEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGS 568
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+L+ Y+K ID A K+ + + +V N++I+G+A ++++ LF ML G
Sbjct: 569 SLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINS 627
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCNCMNSAYHV 262
E T L+ E L++G+ IH LK D ++ L+ MY A +
Sbjct: 628 TEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVL 687
Query: 263 FNSLFHPD-LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F+ +P V W+A+I+G SQ AL ++++ D S L A A ++
Sbjct: 688 FSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSS 747
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVIL 380
+ G H + GF+ + SSALVDMY+KCG + +QVF+ MS ++++I++NS+I+
Sbjct: 748 IKDGTETHSLIFHTGFDSDELTSSALVDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIV 807
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G +G+ A F ++ + + PD+ TF +L AC H G V++GR IF M YG+Q
Sbjct: 808 GFAKNGYAEDALRVFDEMKQSHVTPDDVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQ 867
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+ +H MV LLG G+L+EA FI L D V +L C I+G+ + A +
Sbjct: 868 PRADHCACMVDLLGRWGSLKEAEEFINKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEK 927
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L E +P+ + V+LSN YA G WD+V LR ++ + G++K G SW+
Sbjct: 928 LIELEPQNSSPYVLLSNIYAASGNWDEVNTLRREMREKGVKKLPGCSWI 976
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 214/405 (52%), Gaps = 4/405 (0%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L +A LF + P R+V WN +I +A +A F+N+ + +K T + A
Sbjct: 277 LDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSA 336
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
+ + L VH A+ GL + S+LV+ Y+K ++ A KVFD +++ ++VL
Sbjct: 337 IASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLW 396
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+M+ G+ G+ ++ ++LF M G PD++T ++S L +G +H +K
Sbjct: 397 NAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK 456
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ F S +V + LV MYA+ + A F + + D V+W+ +I GY Q+ D +A +
Sbjct: 457 NKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHL 516
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
FR++N+ G D V +AS+L+A A + G +H ++ G E + S+L+DMY+K
Sbjct: 517 FRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAK 576
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + ++ M ER++++ N++I G QA FRD++ +G+N E TF++L
Sbjct: 577 CGAIDSAHKILACMPERSVVSMNALIAGYAQINLE-QAVNLFRDMLVEGINSTEITFASL 635
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
L AC +N GR+I + + + G+Q E V LLG+ N
Sbjct: 636 LDACHEQQKLNLGRQIHS-LILKMGLQLDDE--FLGVSLLGMYMN 677
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 203/449 (45%), Gaps = 36/449 (8%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H V K + L+ +YA N L AR +FD + W S+I Y
Sbjct: 180 RQVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKV 239
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A +F+ + + +PD + +
Sbjct: 240 GLPEEAVKVFQEMEKVGQEPDQVAFVTV-------------------------------- 267
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ AY L +D A +F + + ++V N MISG A G+ ++++ F M + G
Sbjct: 268 ---INAYVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIK 324
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
TL ++S + + L G +H LK S YV S LVSMYA+C M +A V
Sbjct: 325 STRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKV 384
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F++L ++V W+A++ GY Q G + + F + G D +S+L+A A +
Sbjct: 385 FDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYL 444
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H +I++ F ++ V +ALVDMY+K G L Q FE + R+ +++N +I+G
Sbjct: 445 DLGHQLHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGY 504
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+AF FR + G+ PDE + +++L AC + G+++ ++ + G + K
Sbjct: 505 VQEEDEVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHC-LSVKTGQETK 563
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
++ + G ++ A+ + +P+
Sbjct: 564 LYSGSSLIDMYAKCGAIDSAHKILACMPE 592
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 195/413 (47%), Gaps = 36/413 (8%)
Query: 6 HFLVLELSKSHQSLSRT-KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT 64
H L E+ + S T K +HA K +V LYA + A F +
Sbjct: 61 HSLFDEIPQRLSQFSTTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQL 120
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
+ + WNSI+ ++ + F L + + P+ FT+A + +C+ + R
Sbjct: 121 EDKDILAWNSILSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGR 180
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH + G S AL+ Y+K + + +A +FDG + D V SMI G+ G
Sbjct: 181 QVHCNVVKMGFESISYCEGALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVG 240
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++++++F M ++G+ PD+ V +I+
Sbjct: 241 LPEEAVKVFQEMEKVGQEPDQVAFVTVINA------------------------------ 270
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
Y +++A +F+ + + ++V W+ +I+G+++ G +A+ +F+ + G K+
Sbjct: 271 -----YVDLGRLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKS 325
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ SVL+A A A + G ++H ++ G +V V S+LV MY+KCG + +VF
Sbjct: 326 TRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVF 385
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+T++E+N++ +N+++ G +G+ + E F ++ G PD+ T+S++L AC
Sbjct: 386 DTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSAC 438
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 180/411 (43%), Gaps = 8/411 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S + L + K++H L K + + L+ +YA + SA + P+RS
Sbjct: 535 ILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERS 594
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V N++I YA + A +LF+++L + T+A + AC E L R +H
Sbjct: 595 VVSMNALIAGYAQIN-LEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHS 653
Query: 129 GAIVSGLG-RDSITSSALVTAYSKLSLIDEAIKVFDGVSDP-DLVLCNSMISGFAHCGFW 186
+ GL D +L+ Y +A +F S+P V+ +MISG +
Sbjct: 654 LILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCS 713
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+LQL+ M PD+ T V + S + G H + FDS + SS L
Sbjct: 714 VVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSAL 773
Query: 247 VSMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
V MYA+C + S+ VF + D+++W+++I G+++ G AL F ++ D
Sbjct: 774 VDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPD 833
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
V VL A + S V G +I ++ +G + + +VD+ + G L +
Sbjct: 834 DVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFI 893
Query: 365 ETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
++ E + + +++ +HG + + +IE L P S+ LL
Sbjct: 894 NKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIE--LEPQNSSPYVLL 942
>gi|242035545|ref|XP_002465167.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
gi|241919021|gb|EER92165.1| hypothetical protein SORBIDRAFT_01g033280 [Sorghum bicolor]
Length = 564
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 164/493 (33%), Positives = 257/493 (52%), Gaps = 3/493 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYAT-KLVRLYALNNVLPSARILFDKTP 65
F L ++ + + HA + LL +A+ LV Y + A +FD+ P
Sbjct: 70 FTFPPLVRAAPGPASAAQFHACALRLGLLHPNVFASGSLVHAYLRFGRVAEAYRVFDEMP 129
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R V WN+++ R DA +LF ++ + D T + + C D
Sbjct: 130 ERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLLGDRALALV 189
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H A+ GL + +AL+ Y KL ++ EA VF G++ DLV NS+IS + G
Sbjct: 190 MHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSIISAYEQGGK 249
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-S 244
+++LF M++ G +PD TLV L S + + + +H + + +D D ++ +
Sbjct: 250 VAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWDVGDIIAGN 309
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGKK 303
+V MYA+ + +++A VF++L D+V+W+ LITGY Q G +A+ + + N +G K
Sbjct: 310 AVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYNDMQNHEGLK 369
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
S+L A + + G +H I+ G L V VS+ L+D+Y+KCG L + +
Sbjct: 370 PIQGTFVSILPAYSNLGALQQGMRMHALSIKTGLNLDVYVSTCLIDLYAKCGKLVEAMLL 429
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
FE M R+ +N++I GLG+HG +A F + ++G+ PD TF +LL AC H GLV
Sbjct: 430 FEHMPRRSTGPWNAIIAGLGVHGHGAKALNLFSQMQQEGIKPDNVTFVSLLAACSHAGLV 489
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
+ GR F M YGI +HY MV +LG AG L+EA+ FI +P D AV GALL
Sbjct: 490 DQGRSFFDLMQTVYGIVPIAKHYACMVDMLGRAGQLDEAFEFIQGMPIKPDSAVWGALLG 549
Query: 484 CCHIYGNSDLAEI 496
C I+GN +LA I
Sbjct: 550 ACRIHGNVELAAI 562
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 181/375 (48%), Gaps = 7/375 (1%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI-TSSALVTAYSKLSLIDEA 158
L+PD+FT+ + RA + +F H A+ GL ++ S +LV AY + + EA
Sbjct: 65 LRPDSFTFPPLVRAAPGPAS--AAQF-HACALRLGLLHPNVFASGSLVHAYLRFGRVAEA 121
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+VFD + + D+ N+M+SG ++ LF M+ G D TL ++
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNARAVDAVALFGRMVGEGVAGDAVTLSSVLPMCVLL 181
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
++ +H + +K +V + L+ +Y + + A VF + DLVTW+++I
Sbjct: 182 GDRALALVMHVYAVKRGLSGELFVCNALIDVYGKLGMLVEARWVFGGMALRDLVTWNSII 241
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+ Y Q G A+ F + G D + + S+ +A A+ + +H YV + G++
Sbjct: 242 SAYEQGGKVAAAVELFHGMMKSGVSPDVLTLVSLASAVAQCGDERGAKSVHCYVRRRGWD 301
Query: 339 LS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ ++ +A+VDMY+K + VF+ + +R+++++N++I G +G + +A + D
Sbjct: 302 VGDIIAGNAVVDMYAKLSKIDAAQMVFDNLPDRDVVSWNTLITGYMQNGLSNEAVRIYND 361
Query: 398 II-EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+ +GL P + TF ++L A + G + G + ++ + G+ ++ L
Sbjct: 362 MQNHEGLKPIQGTFVSILPAYSNLGALQQGMRMHA-LSIKTGLNLDVYVSTCLIDLYAKC 420
Query: 457 GNLEEAYSFIWSLPK 471
G L EA +P+
Sbjct: 421 GKLVEAMLLFEHMPR 435
>gi|224122888|ref|XP_002318941.1| predicted protein [Populus trichocarpa]
gi|222857317|gb|EEE94864.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 160/513 (31%), Positives = 273/513 (53%), Gaps = 4/513 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
AT L++ Y + AR LFD+ P+R V W ++I Y + + A S+F ++++
Sbjct: 47 ATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVKNGN 106
Query: 101 KPDN-FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI-TSSALVTAYSKLSL-IDE 157
P N FT + + +AC + R VHG AI I +AL+ Y+ + + +
Sbjct: 107 DPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVGMRD 166
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A VF + + ++V ++I+G+ H G +++LQ+F ML G + +++ +
Sbjct: 167 ACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRACAS 226
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
+ G+ IH +K F+S V++ ++ MY RC C++ A FN + DL+TW+ L
Sbjct: 227 IGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITWNTL 286
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I GY ++ D + + F ++ +G + S++AA A +A + G +HG + + G
Sbjct: 287 IAGY-ERSDSIEPFFIFSQMESEGFSPNCFTFTSLVAACANAAALQCGQQVHGGIFRRGL 345
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ ++ +++AL+DMY+KCG + + F MS N++++ S+++G G HG+ +A E F +
Sbjct: 346 DGNLELANALIDMYAKCGNIIDSQKNFSEMSCTNLVSWTSMMIGYGTHGYGKEAVELFDE 405
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
++ G+ PD+ F A+L AC H GLV+ G M +Y I+ E Y +V LLG G
Sbjct: 406 MVRSGIRPDQVVFMAVLHACSHAGLVDQGLRYINCMINDYHIKPNQEIYGCVVDLLGRPG 465
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
+E+AY I S+P D +V GALL C + S L ++ A + P VMLSN
Sbjct: 466 RVEDAYQLIRSMPFMADESVWGALLGACKAHNFSRLGKLAAKKALALRPNMVETYVMLSN 525
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
YA +G+W + ++R + G RK AG SW+
Sbjct: 526 IYAAEGKWGEAARMRKLMKRAGCRKVAGRSWIE 558
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 157/279 (56%), Gaps = 4/279 (1%)
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
SI ++ L+ +Y + L +A +FD + + D+V +MISG+ HC + ++ +F M++
Sbjct: 44 SILATDLLKSYFERGLTSQARNLFDEMPERDVVAWTTMISGYTHCNEYTQAWSVFVDMVK 103
Query: 199 LGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF-DSYDYVSSVLVSMYARCNC- 255
G P+ +T+ ++ + G+ +HG +K F + + YV + L+ MYA C
Sbjct: 104 NGNDPPNAFTISSVLKACKGMKRVFCGRLVHGLAIKRRFMEGFIYVDNALMDMYASCGVG 163
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M A VF+ + ++V+W+ LI GY+ +G+ +AL FR++ + G +P I+ + A
Sbjct: 164 MRDACVVFHDIKEKNVVSWTTLIAGYTHRGNGNRALQIFREMLLDGVALNPHSISIAVRA 223
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
A + G IH VI+HGFE + V+++++DMY +CG L + F M+E+++IT+
Sbjct: 224 CASIGSQNFGRQIHTAVIKHGFESDLPVTNSILDMYCRCGCLSEANKYFNDMTEKDLITW 283
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
N++I G + + F F + +G +P+ TF++L+
Sbjct: 284 NTLIAGYE-RSDSIEPFFIFSQMESEGFSPNCFTFTSLV 321
>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Brachypodium distachyon]
Length = 682
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 267/537 (49%), Gaps = 4/537 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L K +HA + +A+ D L+ Y L AR +FD P R+ N ++
Sbjct: 26 ELCTGKAIHAQMIRAAHF-DVIQHNHLIAFYGKCGRLGLARQMFDAMPSRNAVSGNLLMS 84
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
YA A R +DA +L K + + + A + R HG A+ SGL
Sbjct: 85 GYASAGRHSDALALLK---AADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQE 141
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+A++ Y + + +++A+KVF+ VS D+ NSMI+GF G +D S+++ M+
Sbjct: 142 HPYVCNAVLHMYCQCAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMV 201
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ D + V ++ L +G +H LK + YV S LV MY +C+C
Sbjct: 202 GEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCDCAR 261
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A+ F L ++V+W+A++T Y+Q + AL F L ++G + + A L + A
Sbjct: 262 DAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALNSCA 321
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G + ++ G ++ V +AL++MYSK G + +VF +M R+++++NS
Sbjct: 322 GLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVSWNS 381
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
VI+G HG +A F D++ + P TF +L AC GLV++G M +E
Sbjct: 382 VIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMMKEM 441
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI+ EHY MV LL AG L+EA FI S D +LLS C +Y N L V
Sbjct: 442 GIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLGHRV 501
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
A Q+ + P V+LSN YA+ RWD V+K+R + + G+RKE GVSW+ S
Sbjct: 502 AEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSE 558
>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 939
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/528 (29%), Positives = 265/528 (50%), Gaps = 2/528 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LHA K D T + +YA L A+ +F+ P+ S+ +N+II
Sbjct: 298 QLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNE 357
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A F+ LL++ L + + + AC+ DL G R +H ++ S L + +
Sbjct: 358 KGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDG-RQLHSLSVKSTLRSNICVA 416
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++++ Y K + EA +FD + D V N++I+ G +++L LF MLRL
Sbjct: 417 NSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLFASMLRLRME 476
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD++T ++ L+ G IH +KS +V L+ MY +C + A +
Sbjct: 477 PDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKI 536
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+ + +V+W+A+I G++ A +F ++ K D A VL A A A+V
Sbjct: 537 HDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASV 596
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IHG +I+ V ++S LVDMYSKCG + VFE ++ +T+N++I G
Sbjct: 597 GLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGY 656
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A +F + + + P+ +TF ++L AC H G ++ G F M EYG++ +
Sbjct: 657 AQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQ 716
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY M+ ++G +G + EA I +P D + LLS C I+GN ++AE + +
Sbjct: 717 IEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLSICKIHGNIEIAEKATNAIL 776
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ +P + ++LSN YA+ G W V ++R + N L+KE G SW+
Sbjct: 777 QLEPEDSSACILLSNIYADAGMWGKVSEMRKMMRYNKLKKEPGCSWIE 824
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 199/394 (50%), Gaps = 4/394 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LH+L K++L + A ++ +Y L A +FD+ +R WN++I A+
Sbjct: 398 RQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQN 457
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +LF ++LR +++PD FTY + +ACS L +H I SGLG DS
Sbjct: 458 GNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDSFVG 517
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
AL+ Y K +I+EA K+ D + +V N++I+GF + + F ML++
Sbjct: 518 GALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVK 577
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +T ++ + + +G+ IHG +K S Y++S LV MY++C M + V
Sbjct: 578 PDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALV 637
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D VTW+A+I GY+Q G +AL YF ++ ++ + + S+L A A +
Sbjct: 638 FEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFI 697
Query: 323 WPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVIL 380
G + + ++G E + S ++D+ + G + +++ + M E + + + +++
Sbjct: 698 DKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+HG A + I++ L P++S+ LL
Sbjct: 758 ICKIHGNIEIAEKATNAILQ--LEPEDSSACILL 789
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 112/460 (24%), Positives = 206/460 (44%), Gaps = 34/460 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+++ + SL K+ HA + + + D + + L+++Y + L A +F+K QR
Sbjct: 49 IIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRD 108
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLR------------------------------- 97
V +N++I YA A N A F + +
Sbjct: 109 VISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGR 168
Query: 98 -TQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
++ D T+A + +ACS D GL VHG + G +D +T SAL+ Y+K +
Sbjct: 169 SEEVGFDQTTFAVVLKACSVLED-GGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRL 227
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+++K+F + + V +++I+G L+LF M ++G + +
Sbjct: 228 DDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSC 287
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S L VG +H LK F S V + + MYA+C + A +FNSL L ++
Sbjct: 288 AGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYN 347
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A+I G + +AL +F+ L G + + ++ +A A G +H ++
Sbjct: 348 AIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHSLSVKS 407
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
++ V+++++DMY KC L +F+ M R+ +++N+VI +G + F
Sbjct: 408 TLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAHEQNGNEEETLNLF 467
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
++ + PD+ T+ ++L AC +N G EI R+ +
Sbjct: 468 ASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIK 507
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 184/396 (46%), Gaps = 38/396 (9%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
S L+N +R + F +L +N +T+L T++ I + CS+ + L + H
Sbjct: 13 SRILYNKTLRIFT----FCTISTLQQN--QTKLPTKIRTFSHIIQECSDYNSLKPGKQAH 66
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG--- 184
IVSG D S+ L+ Y + S ++ A KVF+ +S D++ N+MISG+A G
Sbjct: 67 ARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYADAGEMN 126
Query: 185 ---------------FWDKSLQLF----------DWMLRLGKTP----DEYTLVGLISGL 215
W+ L F D L +G++ D+ T ++
Sbjct: 127 LANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKAC 186
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+G +HG ++ F S L+ MYA+C ++ + +F+ + + V WS
Sbjct: 187 SVLEDGGLGIQVHGLIVRMGFYKDVVTGSALLDMYAKCKRLDDSLKIFSEIPVKNWVCWS 246
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A+I G Q ++ L F+++ G + ASV + A + + G +H + ++
Sbjct: 247 AIIAGCVQNDEHILGLELFKEMQKVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKC 306
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
F + V +A +DMY+KCG L ++F ++ + ++ YN++I+G + ++A +FF
Sbjct: 307 DFGSDITVGTATLDMYAKCGSLADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFF 366
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+ +++ GL +E + S AC DGR++ +
Sbjct: 367 QLLLKSGLGFNEISLSGAFSACASIKGDLDGRQLHS 402
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 132/279 (47%), Gaps = 14/279 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S Q+L+ E+H + K+ L D F L+ +Y ++ A+ + D+ Q++
Sbjct: 485 VLKACSSQQALNSGMEIHNRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQT 544
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+II + L DA S F +L+ +KPDNFTYA + AC+ + + + +HG
Sbjct: 545 MVSWNAIIAGFTLLKHSEDAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHG 604
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I L D +S LV YSK + ++ VF+ + D V N+MI G+A G ++
Sbjct: 605 QIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEE 664
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGF-------CLKSSFDSYDY 241
+L F+ M P+ T V ++ + +G+H F L+ + Y
Sbjct: 665 ALGYFERMQLENVRPNHATFVSILRACAHMGF--IDKGLHYFNAMLTEYGLEPQIEHY-- 720
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
S ++ + R ++ A + + F D V W L++
Sbjct: 721 --SCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 6/122 (4%)
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
PG H +I GF V +S+ L+ MY +C +L +VFE MS+R++I+YN++I G
Sbjct: 61 PGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFEKMSQRDVISYNTMISGYA 120
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM--TEEYGIQA 441
G A EFF D ++ D +++++L G ++F M +EE G
Sbjct: 121 DAGEMNLANEFFYDTPKR----DVVSWNSMLSGFLQNGECRKSIDVFLDMGRSEEVGFDQ 176
Query: 442 KT 443
T
Sbjct: 177 TT 178
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 81/173 (46%), Gaps = 2/173 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL+ + S+ K++H + K L D + + LV +Y+ + + ++F+K P +
Sbjct: 585 IVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLVDMYSKCGNMQDSALVFEKAPNK 644
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFV 126
WN++I YA +A F+ + ++P++ T+ I RAC+ + GL +
Sbjct: 645 DFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRACAHMGFIDKGLHYF 704
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMIS 178
+ GL S ++ + I EA+K+ + + D V+ +++S
Sbjct: 705 NAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQEMPFEADAVIWRTLLS 757
>gi|147812109|emb|CAN61522.1| hypothetical protein VITISV_010801 [Vitis vinifera]
Length = 674
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 269/544 (49%), Gaps = 4/544 (0%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L++S L K+LHA V K +++ +Y +FD+ P ++V
Sbjct: 80 LKISAKLGFLHGGKQLHAHVIKLGXCNLLSLQNQVLHVYVKCKEFNDVCKMFDEMPLKNV 139
Query: 70 FLWNSIIRAYALAH-RFNDAK---SLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
WN++I + +F + F+ ++ + P+ T + RA E +D+ R
Sbjct: 140 VSWNTLICGVVEGNCKFALVRLGFHCFRQMVLEMMAPNCITLNGLLRASIELNDVGICRQ 199
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H + SG + SALV +Y+K L+DEA FD VS DLVL N M+S +A G
Sbjct: 200 LHCFILKSGFDSNCFVGSALVDSYAKFGLVDEAQSAFDEVSSRDLVLWNVMVSCYALNGV 259
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
K+ +F M G D +T +I+ +G+ +HG ++ SFD V+S
Sbjct: 260 QGKAFGVFKLMRLEGVKGDXFTFTSMINSCGVLGSCGLGKQVHGLIIRLSFDLDVLVASA 319
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MY++ + A F+ + ++V+W+ + GY Q GD + + +++ D
Sbjct: 320 LVDMYSKNENIEDARKAFDGMJVKNIVSWTTMXVGYGQHGDGKEXMRLLQEMIRVYTYPD 379
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
+ +AS+L++ + +H YV+++GFE + +++ALV YSKCG +G Q F
Sbjct: 380 ELALASILSSCGNLSATSEVVQVHAYVVENGFEAFLSIANALVSAYSKCGSIGSAFQSFS 439
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+++E +II++ S++ HG + Q + F I+ + PD+ F +L AC HGG V +
Sbjct: 440 SVAEPDIISWTSLMGAYAFHGLSKQGVDVFEKILSSNVRPDKVAFLGVLSACAHGGFVLE 499
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G F M Y I +EHY ++ LLG AG L+EA + + S+P GA L C
Sbjct: 500 GLHYFNLMINVYQIMPDSEHYTSIIDLLGRAGFLDEAVNLLTSMPVEPRSDTLGAFLGAC 559
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
+Y N LA + +LF +P + ++SN YA G W DV ++R + + K G
Sbjct: 560 KVYRNVGLARWASEKLFVMEPNEPGKYSLMSNMYASVGHWFDVARVRKLMRERCDFKVPG 619
Query: 546 VSWV 549
SW+
Sbjct: 620 CSWM 623
>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
Length = 871
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 181/578 (31%), Positives = 284/578 (49%), Gaps = 51/578 (8%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV---FLWNSIIRAYAL 81
+HA+V + + F LV +Y +AR +FD+ +R V WNSI+ AY
Sbjct: 167 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 226
Query: 82 AHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A +F+ + ++PD + + AC+ + VHG A+ SGL D
Sbjct: 227 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 286
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD------ 194
+A+V Y+K +++EA KVF+ + D+V N+M++G++ G +D +L LF+
Sbjct: 287 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 346
Query: 195 -------W----------------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
W ML G P+ TLV L+SG L G+
Sbjct: 347 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGK 406
Query: 226 GIHGFCLK--SSFDSYD-----YVSSVLVSMYARCNCMNSAYHVFNSLFHPD--LVTWSA 276
H +K + D D V + L+ MY++C +A +F+ + D +VTW+
Sbjct: 407 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 466
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVIQ 334
LI G +Q G+ +AL F ++ P I+ L A A+ + G IH YV++
Sbjct: 467 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 526
Query: 335 HGFELSVM-VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ FE +++ V++ L+DMYSK G + VF+ M +RN +++ S++ G G+HG +A +
Sbjct: 527 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 586
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F ++ + L PD TF +L AC H G+V+ G F M +++G+ EHY MV LL
Sbjct: 587 IFYEMQKVXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLL 646
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
AG L+EA I +P PAV ALLS C +Y N +L E A+QL E +
Sbjct: 647 SRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYT 706
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
+LSN YA W DV ++R + + G++K G SWV G
Sbjct: 707 LLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQG 744
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 211/468 (45%), Gaps = 61/468 (13%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQ-RSVFLWNS 74
+SL+ + H + L DP T ++ +Y N+ + +L P +VF WN
Sbjct: 59 KSLASAELTHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQ 115
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAI 131
+IR D L++ + R +PD++T+ + +AC E +P R VH
Sbjct: 116 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE---IPSFRCGASVHAVVF 172
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP---DLVLCNSMISGFAHCGFWDK 188
SG + + LV+ Y + + A +VFD + + DLV NS+++ + G +
Sbjct: 173 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 232
Query: 189 SLQLFDWMLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++++F+ M LG PD +LV ++ S G+ +HG+ L+S +V + +V
Sbjct: 233 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 292
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ------- 300
MYA+C M A VF + D+V+W+A++TGYSQ G + AL F K+ +
Sbjct: 293 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 352
Query: 301 ----------------------------GKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
G + + V + S+L+ A + + G H +
Sbjct: 353 TWSAVIAGYAQRGLGFEALDVFRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHA 412
Query: 333 IQHGFEL-------SVMVSSALVDMYSKCGYLGLGIQVFETM--SERNIITYNSVILGLG 383
I+ L +MV +AL+DMYSKC +F+ + +R+++T+ +I G
Sbjct: 413 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 472
Query: 384 LHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVNDGREI 429
HG +A E F +++ + P+ T S L AC G + GR+I
Sbjct: 473 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQI 520
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 155/321 (48%), Gaps = 11/321 (3%)
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMI 177
L H +V GL D + +++ Y + +A+ V + S + N +I
Sbjct: 61 LASAELTHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLI 117
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
H GF + LQL+ M RLG PD YT ++ E G +H S F+
Sbjct: 118 RRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFE 177
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP---DLVTWSALITGYSQQGDYGKALYYF 294
+V + LVSMY RC +A VF+ + DLV+W++++ Y Q GD +A+ F
Sbjct: 178 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 237
Query: 295 RKLNMQ-GKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFELSVMVSSALVDMYS 352
++ G + D V + +VL A A S W G +HGY ++ G V V +A+VDMY+
Sbjct: 238 ERMTEDLGIRPDAVSLVNVLPACA-SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 296
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG + +VFE M ++++++N+++ G G A F I E+ + + T+SA
Sbjct: 297 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 356
Query: 413 LLCACCHGGLVNDGREIFTRM 433
++ GL + ++F +M
Sbjct: 357 VIAGYAQRGLGFEALDVFRQM 377
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 173/407 (42%), Gaps = 48/407 (11%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S + SR K++H ++ L D F +V +YA ++ A +F++ +
Sbjct: 256 VLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD 315
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL---------------------------- 100
V WN+++ Y+ RF+DA LF+ + ++
Sbjct: 316 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 375
Query: 101 -------KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL-------GRDSITSSALV 146
+P+ T + C+ L + H AI L G D + +AL+
Sbjct: 376 QMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 435
Query: 147 TAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK--T 202
YSK A +FD + D +V +I G A G +++L+LF ML+
Sbjct: 436 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 495
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS-YDYVSSVLVSMYARCNCMNSAYH 261
P+ +T+ + L G+ IH + L++ F+S +V++ L+ MY++ +++A
Sbjct: 496 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARV 555
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+++ + V+W++L+TGY G +AL F ++ D V VL A + S
Sbjct: 556 VFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSGM 615
Query: 322 VWPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
V G +G G + +VD+ S+ G L +++ M
Sbjct: 616 VDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 662
>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
Length = 785
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 268/535 (50%), Gaps = 8/535 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +HAL L F + LV +Y+ + AR +FD +R WNS++ Y A
Sbjct: 129 RAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRA 188
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD--LPGLRFVHGGAIVSGLGRDSI 140
+ +F + R + ++F + + CS D + VHG I +GL D
Sbjct: 189 GAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG------FWDKSLQLFD 194
SA++ Y+K + EA +F V +P++V+ N+MI+GF ++L L+
Sbjct: 249 LVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYS 308
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G P E+T ++ L G+ IHG +K +F D++ S L+ +Y
Sbjct: 309 EVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSG 368
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
CM + F S D+VTW+A+++G Q + KAL F + G K D I+SV+
Sbjct: 369 CMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A A G I + + GF+ ++ ++ V MY++ G + + F+ M ++++
Sbjct: 429 ACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVS 488
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+++VI HG A FF ++++ + P+E TF +L AC HGGLV++G + MT
Sbjct: 489 WSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMT 548
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++YG+ +H +V LLG AG L +A +FI + DP + +LL+ C I+ + +
Sbjct: 549 KDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNSIFHADPVIWRSLLASCRIHRDLERG 608
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++VA+++ E +P A V+L N Y + G K RD + G++KE G+SW+
Sbjct: 609 QLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWI 663
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 194/389 (49%), Gaps = 11/389 (2%)
Query: 50 LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYAC 109
L LP AR L D+ P+R+ +N +I AY+ + R + D F+YA
Sbjct: 56 LGGPLP-ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAA 114
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
ACS L R VH AI+ GL S++LV+ YSK + EA +VFD + D
Sbjct: 115 ALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERD 174
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQG 226
V NS++SG+ G ++ +++F M R G + + L +I SG + + + + +
Sbjct: 175 DVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGT-MDIAEA 233
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ-QG 285
+HG +K+ DS ++ S ++ MYA+ + A +F S+ P++V ++ +I G+ + +
Sbjct: 234 VHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTET 293
Query: 286 DYGK-----ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
GK AL + ++ +G + +SVL A + + G IHG VI++ F+
Sbjct: 294 VIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED 353
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ SAL+D+Y G + G + F + + +I+T+ +++ G + +A F + +
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREI 429
GL PD T S+++ AC + G +I
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQI 442
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 7/236 (2%)
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
++ + L++ Y R A + + + + V+++ LI YS++G +L +
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G D A+ LAA +++ ++ G +H I G V VS++LV MYSKCG +G
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF+ ER+ +++NS++ G G + F + G+ + +++ CC G
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVI-KCCSG 222
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKP 472
DG I+A + ++ M+ + G L EA + S+ +P
Sbjct: 223 R--GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEP 276
>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Glycine max]
Length = 986
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 185/579 (31%), Positives = 278/579 (48%), Gaps = 54/579 (9%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV---FLWNSIIRAYALA 82
HA V+++ + F +V +Y L A +FD R + WNS++ AY A
Sbjct: 282 HATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWA 341
Query: 83 HRFNDAKSLF-KNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
N A +LF K R + PD + I AC+ + R VHG +I SGL D
Sbjct: 342 SDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFV 401
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD------- 194
+A+V Y+K ++EA KVF + D+V N+M++G++ G + +L LF+
Sbjct: 402 GNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461
Query: 195 ------W----------------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
W M G P+ TLV L+S L G+
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKE 521
Query: 227 IHGFCLKS--SFDSYD------YVSSVLVSMYARCNCMNSAYHVFNSLFHPD--LVTWSA 276
H + +K + D D V + L+ MYA+C A +F+S+ D +VTW+
Sbjct: 522 THCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTV 581
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+I GY+Q GD AL F + K P ++ L A A+ A + G +H YV++
Sbjct: 582 MIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLR 641
Query: 335 HGFELSVM--VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+ F SVM V++ L+DMYSK G + VF+ M +RN +++ S++ G G+HG A
Sbjct: 642 N-FYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGEDAL 700
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
F ++ + L PD TF +L AC H G+V+ G F RM++++G+ EHY MV L
Sbjct: 701 RVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMVDL 760
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
G AG L EA I +P P V ALLS C ++ N +L E A++L E +
Sbjct: 761 WGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDGSY 820
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
+LSN YA RW DV ++R + G++K G SW+ G
Sbjct: 821 TLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQG 859
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 147/577 (25%), Positives = 249/577 (43%), Gaps = 94/577 (16%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFY-ATKLVRLYALNNVLPSARILFDKTPQR--SVF 70
K SL+ K LH LL F+ AT L+ Y +N A +L ++ P SVF
Sbjct: 169 KECNSLAHAKLLHQQSIMQGLL---FHLATNLIGTYIASNSTAYAILLLERLPPSPSSVF 225
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
WN +IR D +L++ + PD++T+ + +AC+ S L +H
Sbjct: 226 WWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATV 285
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD---PDLVLCNSMISGFAHCGFWD 187
SG + +A+V+ Y K + A +FD + DLV NS++S + +
Sbjct: 286 SRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDAN 345
Query: 188 KSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+L LF M R +PD +LV ++ + G+ +HGF ++S +V + +
Sbjct: 346 TALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNAV 405
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V MYA+C M A VF + D+V+W+A++TGYSQ G AL F ++ + + D
Sbjct: 406 VDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENIELDV 465
Query: 307 VLIASVLAAAAK------------------------------SANVWPGAVIHG-----Y 331
V +V+ A+ SA V GA++HG Y
Sbjct: 466 VTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLHGKETHCY 525
Query: 332 VIQHGFEL--------SVMVSSALVDMYSKCGYLGLGIQVFETMS--ERNIITYNSVILG 381
I+ L + V + L+DMY+KC + ++F+++S +R+++T+ +I G
Sbjct: 526 AIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVTWTVMIGG 585
Query: 382 LGLHGFTYQAFEFFRDI--IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
HG A + F + ++K + P++ T S L AC + GR++ + +
Sbjct: 586 YAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAYVLRNF-- 643
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
Y +L +A L + YS G+ D A+IV
Sbjct: 644 --------YGSVMLFVANCLIDMYS----------------------KSGDVDTAQIV-- 671
Query: 500 QLFENDPRKGAYK-VMLSNTYAEDGRWDDVMKLRDDI 535
F+N P++ A L Y GR +D +++ D++
Sbjct: 672 --FDNMPQRNAVSWTSLMTGYGMHGRGEDALRVFDEM 706
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 183/396 (46%), Gaps = 30/396 (7%)
Query: 55 PSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL--LRTQLKPDNFT----YA 108
P+ RI+F Q+ L HR+ + S+ ++++L FT +
Sbjct: 113 PAIRIVFVSVLQQ-------------LHHRYRCSISMLLRCFPIKSKLLQSQFTNTRLLS 159
Query: 109 CIT---RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
C T A E + L + +H +I+ GL T+ L+ Y + AI + + +
Sbjct: 160 CATIPITALKECNSLAHAKLLHQQSIMQGLLFHLATN--LIGTYIASNSTAYAILLLERL 217
Query: 166 --SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
S + N +I H G L+ M LG TPD YT + S LS+
Sbjct: 218 PPSPSSVFWWNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSL 277
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH---PDLVTWSALITG 280
G +H +S F S +V + +VSMY +C + A+++F+ L H DLV+W+++++
Sbjct: 278 GASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGIQDLVSWNSVVSA 337
Query: 281 YSQQGDYGKALYYFRKLNMQG-KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
Y D AL F K+ + D + + ++L A A A G +HG+ I+ G
Sbjct: 338 YMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVD 397
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
V V +A+VDMY+KCG + +VF+ M ++++++N+++ G G A F +
Sbjct: 398 DVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMT 457
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
E+ + D T++A++ G + ++F +M +
Sbjct: 458 EENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCD 493
>gi|225216998|gb|ACN85287.1| EMB2261 putative [Oryza australiensis]
Length = 626
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/535 (31%), Positives = 266/535 (49%), Gaps = 7/535 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LHA A+A L D + A L+ Y L LP A FD P R V +SI+ A+ A
Sbjct: 60 LHARAARAGFLADRYLANALLAFYVRLPRHLPHALRAFDDLPHRDVVAHSSILAAFLRAG 119
Query: 84 RFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A + + +L + P+ + +AC+ D +HG +V G+G D +
Sbjct: 120 MPRRALASLRAMLAGADDDVSPNAHALSAAVKACAVLRDRKAGACLHGSVLVRGMGDDDV 179
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
S+LV Y ++ +A K F+ + PD + S+IS F +++++++ F ML +
Sbjct: 180 VLSSLVDMYGHVAAPGDARKAFEEMRGPDGICYTSLISAFVRNDWFEEAVRWFRSMLTMN 239
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD T +++ L S G+ H + V S + MYA+C M A
Sbjct: 240 GVRPDGCTFGSMMTALGNLKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEA 299
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + + V+ AL+ GY Q G+Y K + FR+ M + D + +VL A A
Sbjct: 300 RKVFDRMEVRNEVSRCALLGGYCQNGEYEKVIALFRE--MDKEDGDWYSLGTVLRACAGL 357
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++V PG IH ++ G V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 358 SSVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYACSVFEASTVRNTITWNAMI 417
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A F ++ +G PD +F +L AC H G+V GR F M ++YGI
Sbjct: 418 SGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFDSMCKDYGI 477
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV LL LEEA I P D ++ A+L + N D+AE VA
Sbjct: 478 APGIEHYNCMVDLLSRVELLEEAEDLINESPFRNDSSLWAAILGASATHSNPDVAERVAK 537
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
++ E +P+ ++L N Y GRW+D +++R + ++KE G+SW+ + +
Sbjct: 538 KMMELEPQYHLSYILLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWIDANRS 592
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 122/265 (46%), Gaps = 12/265 (4%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S+ ++ HA V L + + + +YA ++ AR +FD+ R+ +++ Y
Sbjct: 262 SQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMEVRNEVSRCALLGGY 321
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +LF+ + + D ++ + RAC+ S + + +H + G RD
Sbjct: 322 CQNGEYEKVIALFREMDKED--GDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGGWRDV 379
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ SALV Y+K +D A VF+ + + + N+MISGFA G ++++ LF+ M+R
Sbjct: 380 VVESALVDLYAKCGAVDYACSVFEASTVRNTITWNAMISGFAQNGHGERAINLFNRMVRE 439
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYARCN 254
G PD + +G++ ++ G+ + + + Y+ +V + +R
Sbjct: 440 GPRPDYISFIGVLFACSHTGMVEQGRNYFDSMCKDYGIAPGIEHYN----CMVDLLSRVE 495
Query: 255 CMNSAYHVFN-SLFHPDLVTWSALI 278
+ A + N S F D W+A++
Sbjct: 496 LLEEAEDLINESPFRNDSSLWAAIL 520
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + RD + LV LYA + A +F+ + R+
Sbjct: 350 VLRACAGLSSVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYACSVFEASTVRN 409
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
WN++I +A A +LF ++R +PD ++ + ACS
Sbjct: 410 TITWNAMISGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACS 456
>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
Length = 779
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/548 (31%), Positives = 274/548 (50%), Gaps = 5/548 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ + L + +HA A L D F +T L+ LY A +F K P R
Sbjct: 104 FVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMR 163
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDLPGLRFV 126
V WN+++ YA ++ A + ++ R L+P+ T + +++ L V
Sbjct: 164 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223
Query: 127 HGGAIVSGLGRDS---ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
H + + L ++ + +AL+ Y+K + A +VF G++ + V +++I GF C
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLC 283
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVG-LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++ LF ML G T V + + L +G +H KS +
Sbjct: 284 DRMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTA 343
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L+SMYA+ +N A +F+ + D +++ AL++GY Q G +A F+K+
Sbjct: 344 GNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNV 403
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D + S++ A + A + G HG VI G L + ++L+DMY+KCG + L Q
Sbjct: 404 QPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRIDLSRQ 463
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF+ M R+I+++N++I G G+HG +A F + +G PD+ TF L+ AC H GL
Sbjct: 464 VFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSHSGL 523
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V +G+ F MT +YGI + EHYI MV LL G L+EAY FI S+P D V GALL
Sbjct: 524 VTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVWGALL 583
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
C I+ N DL + V+ + + P V+LSN ++ GR+D+ ++R G +K
Sbjct: 584 GACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVKGFKK 643
Query: 543 EAGVSWVS 550
G SW+
Sbjct: 644 SPGCSWIE 651
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 194/379 (51%), Gaps = 5/379 (1%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L AR +FD+ P +N++IRAY+ F+ A L++++L ++ P+ +T+ + +A
Sbjct: 49 LALARQVFDRIPAPDARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFVLKA 108
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
CS +DL R +H A GL D S+AL+ Y + + A VF + D+V
Sbjct: 109 CSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANVFAKMPMRDVVAW 168
Query: 174 NSMISGFAHCGFWDKSL-QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+M++G+A+ G + ++ L D R G P+ TLV L+ L + L G +H +CL
Sbjct: 169 NAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCL 228
Query: 233 KSSFDSYD---YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
++ D + + + L+ MYA+C + A VF+ + + VTWSALI G+ +
Sbjct: 229 RAYLDQNEEQVLIGTALLDMYAKCKHLVYACRVFHGMTVRNEVTWSALIGGFVLCDRMTE 288
Query: 290 ALYYFRKLNMQGKK-ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
A F+ + ++G +AS L A A++ G +H + + G + ++L+
Sbjct: 289 AFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHADLTAGNSLL 348
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
MY+K G + +F+ ++ ++ I+Y +++ G +G +AF F+ + + PD +
Sbjct: 349 SMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIA 408
Query: 409 TFSALLCACCHGGLVNDGR 427
T +L+ AC H + GR
Sbjct: 409 TMVSLIPACSHLAALQHGR 427
>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
Length = 630
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 145/460 (31%), Positives = 246/460 (53%), Gaps = 1/460 (0%)
Query: 93 KNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
KNL+R + D FT + + C++ L + HG AI GL D++T + L+ Y+K
Sbjct: 44 KNLVRVERDLIDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTK 103
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
D A +VFD +S ++ N+MI+G+ H ++L+LF M R G E+TL
Sbjct: 104 CGQNDCARRVFDAMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSST 163
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
+ + + +H +K + DS +V + + +YA+CN + A VF ++
Sbjct: 164 LCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTS 223
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
VTWS+L G+ Q G + + L F+ +G + ++S+L+ A A + G +H
Sbjct: 224 VTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAV 283
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
+++HGF ++ V+++LVD+Y+KCG + +VF M E+N++ +N++I H +++A
Sbjct: 284 IVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEA 343
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
F + + G+ P+E T+ ++L AC H GLV +GR F + + + HY MV
Sbjct: 344 MILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVD 403
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
+LG +G +EA+ + +P ++ G+LL I+ N LA I A QLF +P G
Sbjct: 404 VLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQLFRLEPENGGN 463
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
V+LSN YA G W++V+ R + D+G +KE G SW+
Sbjct: 464 HVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEA 503
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 165/366 (45%), Gaps = 2/366 (0%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F LH L L+L +SL K H L L+ D L+ LY AR +FD
Sbjct: 57 FTLHEL-LQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRVFD 115
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
RS+ WN++I Y +A LF + R + FT + AC+ +
Sbjct: 116 AMSVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIE 175
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +H AI L S +A + Y+K ++I +A VF+ + + V +S+ +GF
Sbjct: 176 CKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACWVFENMPEKTSVTWSSLFAGFVQ 235
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G ++ L LF R G E+T+ ++S +L+ G +H +K F +V
Sbjct: 236 NGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFHRNLFV 295
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
++ LV +YA+C + +Y VF + ++V W+A+I +S+ +A+ F K+ G
Sbjct: 296 ATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGI 355
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ V S+L+A + + V G ++ E +V+ S +VD+ + G
Sbjct: 356 FPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAW 415
Query: 362 QVFETM 367
++ + M
Sbjct: 416 KLLDKM 421
>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 786
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 171/583 (29%), Positives = 282/583 (48%), Gaps = 68/583 (11%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
LR F ++ Y+ + S FD+ PQR W ++I Y +++ A + +
Sbjct: 77 LRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGD 136
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK--- 151
+++ ++P FT + + + + + VH + GL + S++L+ Y+K
Sbjct: 137 MVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGD 196
Query: 152 ----------------------------LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +D A+ F+ +++ D+V NSMISGF
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 184 GFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
G+ ++L +F MLR +PD +TL ++S L +G+ IH + + FD V
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIV 316
Query: 243 SSVLVSMYARCNC---------------------------------MNSAYHVFNSLFHP 269
+ L+SMY+RC MN A ++F SL
Sbjct: 317 LNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D+V W+A+I GY Q G YG+A+ FR + G++ + +A++L+ A+ A++ G IH
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFT 388
G ++ G SV VS+AL+ MY+K G + + F+ + ER+ +++ S+I+ L HG
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
+A E F ++ +GL PD T+ + AC H GLVN GR+ F M + I HY
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
MV L G AG L+EA FI +P D G+LLS C ++ N DL ++ A +L +P
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 509 -GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
GAY L+N Y+ G+W++ K+R + D ++KE G SW+
Sbjct: 617 SGAYSA-LANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIE 658
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 175/391 (44%), Gaps = 41/391 (10%)
Query: 34 LLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSL-- 91
++RD ++ L+ + A F++ +R + WNS+I + R D ++L
Sbjct: 208 VVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFN--QRGYDLRALDI 265
Query: 92 FKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS 150
F +LR + L PD FT A + AC+ L + +H + +G I +AL++ YS
Sbjct: 266 FSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS 325
Query: 151 ---------------------------------KLSLIDEAIKVFDGVSDPDLVLCNSMI 177
KL +++A +F + D D+V +MI
Sbjct: 326 RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMI 385
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
G+ G + +++ LF M+ G+ P+ YTL ++S + LS G+ IHG +KS
Sbjct: 386 VGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEI 445
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRK 296
VS+ L++MYA+ + SA F+ + D V+W+++I +Q G +AL F
Sbjct: 446 YSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFET 505
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA-LVDMYSKCG 355
+ M+G + D + V +A + V G + + + A +VD++ + G
Sbjct: 506 MLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAG 565
Query: 356 YLGLGIQVFETMS-ERNIITYNSVILGLGLH 385
L + E M E +++T+ S++ +H
Sbjct: 566 LLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 71/160 (44%), Gaps = 3/160 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP-QRSVFLWNSIIRAYAL 81
K++H K+ + + L+ +YA + SA FD +R W S+I A A
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLGRDSI 140
+A LF+ +L L+PD+ TY + AC+ + G ++ V +
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS 552
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISG 179
+ +V + + L+ EA + + + +PD+V S++S
Sbjct: 553 HYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/234 (19%), Positives = 93/234 (39%), Gaps = 63/234 (26%)
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY--------------------- 356
KS + ++H VI+ G SV + + L+++YSK GY
Sbjct: 26 KSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNT 85
Query: 357 ----------LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
+ + F+ + +R+ +++ ++I+G G ++A D++++G+ P
Sbjct: 86 VLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPT 145
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
+ T + +L + + G+++ + ++VK LGL GN+ + S +
Sbjct: 146 QFTLTNVLASVAATRCMETGKKVHS----------------FIVK-LGLRGNVSVSNSLL 188
Query: 467 WSLPKPVDPAVS---------------GALLSCCHIYGNSDLAEIVAHQLFEND 505
K DP ++ A+++ G DLA Q+ E D
Sbjct: 189 NMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
>gi|357165628|ref|XP_003580444.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Brachypodium distachyon]
Length = 779
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 166/524 (31%), Positives = 282/524 (53%), Gaps = 15/524 (2%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F + + +++ + SAR++FD ++++ +WN++I Y +F++A LF ++
Sbjct: 243 DLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIM 302
Query: 97 RTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS---ITSSALVTAYSKL 152
++ P D T+ A S++ D + +HG ++ G+ R + I +ALV YS+
Sbjct: 303 GSKGVPLDVVTFLSAITAASQSQDGKLGQQLHG-YLMKGM-RSTLPVILGNALVVMYSRC 360
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
+ A +FD + + D+V N+M++ F F + L L M + G D TL ++
Sbjct: 361 GNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVL 420
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP-DL 271
S L +G+ HG+ ++ + + + S L++MY++ ++ A VF+ + D
Sbjct: 421 SAASNTGDLQIGKQSHGYLIRHGIEG-EGLESYLINMYSKSGHIDMAQRVFDGYGNDRDE 479
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK-SANVWPGAVIHG 330
VTW+A+I GY+Q G +A+ FR + G + V +ASVL A V G IH
Sbjct: 480 VTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVTLASVLPACEPVGEGVQAGKQIHS 539
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
+ ++H + ++ V +ALVDMYSKCG + VF+ M+E++ +TY ++I GLG HGF +
Sbjct: 540 FALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLGQHGFGDR 599
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A F + + GL PD TF A + AC + GLV++G ++ M E +G+ A +H+ +V
Sbjct: 600 ALFLFYSMQDNGLKPDAVTFLAAISACNYSGLVDEGLSLYRSM-ETFGLSATPQHHCCIV 658
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVD-PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
LL AG +EEAY F+ SL + + A+ G+LL+ C G +L V +L + + G
Sbjct: 659 DLLAKAGRVEEAYDFVESLGEDGNFIAIWGSLLASCKAQGKQELTAFVTDKLLNIEKQYG 718
Query: 510 ----AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y V+LS +A +G W LR ++ GLRK+ G SW+
Sbjct: 719 HAHAGYNVLLSQLFAAEGNWSSADSLRREMRVRGLRKDVGSSWI 762
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 108/383 (28%), Positives = 203/383 (53%), Gaps = 14/383 (3%)
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI-TRACSE 116
R LFD TP+R+V WN+++ Y R +A +F +L ++P ++ + A S+
Sbjct: 162 RRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPTPVSFVNVFPAAASD 221
Query: 117 NSDLP----GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
+ P G+ HG VS D S+ + +S++ + A VFD + ++ +
Sbjct: 222 DPSWPFFLYGMLIKHGVEYVS----DLFVVSSAIAMFSEIGDVQSARMVFDHAAKKNIEV 277
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N+MI+G+ G + +++ LF ++ P D T + I+ + +GQ +HG+
Sbjct: 278 WNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQSQDGKLGQQLHGYL 337
Query: 232 LKSSFDSYDYV-SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
+K + + + LV MY+RC +++A+ +F+ L D+V+W+ ++T + Q +
Sbjct: 338 MKGMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNTMVTAFVQNDFDFEG 397
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L +++ G AD V + +VL+AA+ + ++ G HGY+I+HG E + S L++M
Sbjct: 398 LLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLIRHGIE-GEGLESYLINM 456
Query: 351 YSKCGYLGLGIQVFETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDEST 409
YSK G++ + +VF+ ++R+ +T+N++I G G QA FR ++E G+ P T
Sbjct: 457 YSKSGHIDMAQRVFDGYGNDRDEVTWNAMIAGYTQSGQPEQAVLAFRAMVEAGVEPTSVT 516
Query: 410 FSALLCACCH-GGLVNDGREIFT 431
+++L AC G V G++I +
Sbjct: 517 LASVLPACEPVGEGVQAGKQIHS 539
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 211/445 (47%), Gaps = 24/445 (5%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRS-VFLWNSIIRAYALAHRFNDAKSLFKN 94
R AT++ +L + + R+L D P+ L N ++ AY + A L+
Sbjct: 28 RTQLAATQVKKLCKQGRLEHARRLLLDALPRPPPTLLCNVLLIAYVAGALPDHALGLYGV 87
Query: 95 L---LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI--VSGLGRDSITSSALVTAY 149
L R + D++TY+C AC+ + L R VH + L ++ ++L+ Y
Sbjct: 88 LNHAARPPPRSDHYTYSCALTACARSRRLRLGRSVHAHLLRRARSLPDTAVLRNSLLNLY 147
Query: 150 SKLSL-----IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
+ + +D ++FD ++V N+++ + G ++L++F ML G P
Sbjct: 148 ASCARYRHGGVDVVRRLFDATPKRNVVSWNTLVGWYVKTGRPYEALEMFMRMLEDGIRPT 207
Query: 205 EYTLVGLISGLW--EPSLLSVGQGIHGFCLKSSFD--SYDYVSSVLVSMYARCNCMNSAY 260
+ V + +PS ++G +K + S +V S ++M++ + SA
Sbjct: 208 PVSFVNVFPAAASDDPSWPFF---LYGMLIKHGVEYVSDLFVVSSAIAMFSEIGDVQSAR 264
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF-RKLNMQGKKADPVLIASVLAAAAKS 319
VF+ ++ W+ +ITGY Q G + +A+ F + + +G D V S + AA++S
Sbjct: 265 MVFDHAAKKNIEVWNTMITGYVQNGQFSEAMDLFIQIMGSKGVPLDVVTFLSAITAASQS 324
Query: 320 ANVWPGAVIHGYVIQHGFE--LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G +HGY+++ G L V++ +ALV MYS+CG + +F+ + E++I+++N+
Sbjct: 325 QDGKLGQQLHGYLMK-GMRSTLPVILGNALVVMYSRCGNVHAAFDLFDQLPEKDIVSWNT 383
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
++ + F ++ + + G D T +A+L A + G + G++ + +
Sbjct: 384 MVTAFVQNDFDFEGLLLVYQMHKSGFVADAVTLTAVLSAASNTGDLQIGKQSHGYLI-RH 442
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEA 462
GI+ + Y++ + +G+++ A
Sbjct: 443 GIEGEGLES-YLINMYSKSGHIDMA 466
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H+ + SL + F T LV +Y+ + +A +FD+ ++S + ++I
Sbjct: 535 KQIHSFALRHSLDTNIFVGTALVDMYSKCGEITAAENVFDRMTEKSTVTYTTMISGLG-Q 593
Query: 83 HRFND-AKSLFKNLLRTQLKPDNFTYACITRACS 115
H F D A LF ++ LKPD T+ AC+
Sbjct: 594 HGFGDRALFLFYSMQDNGLKPDAVTFLAAISACN 627
>gi|242043708|ref|XP_002459725.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
gi|241923102|gb|EER96246.1| hypothetical protein SORBIDRAFT_02g009440 [Sorghum bicolor]
Length = 691
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/487 (31%), Positives = 250/487 (51%), Gaps = 35/487 (7%)
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ + PD FTY + RAC+E ++L R VH A +G+ +ALV+ Y+K +
Sbjct: 152 KDAVPPDAFTYPKVLRACAETANLALGRAVHVRAADAGMDGHLFCQNALVSMYAKCGDVV 211
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF-------------DW-------- 195
A VF+G+ D+V NSMISG+A G W ++++LF W
Sbjct: 212 AARGVFEGMEHRDVVSWNSMISGYAASGQWREAVELFRRMQAEGAEVNSVTWNTIAGGYI 271
Query: 196 --------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
M+R G + D TLV + L +G+ IHG ++ D
Sbjct: 272 QMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDS 331
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V + +++MYARCN M A +F + P LV W+ +I G++ D A FR++
Sbjct: 332 VINAVITMYARCNDMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSD 391
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ + V + + LA A+ AN+ G +H ++I+ GF+ ++ ++L+DMYSK G L +
Sbjct: 392 VQPNYVTVVTYLALCARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQ 451
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
VF+TM + ++I++ S+I G G+ G + FF+ +I+ G+ PD +L AC H G
Sbjct: 452 NVFDTMDDHDMISFTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSG 511
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV++G E+F +M + YGI+ + EHY MV L AG LE+A + P P + AL
Sbjct: 512 LVDEGEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAAL 571
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
+ CH GN + E A +L E + V+++N YA G W+++ +R + D G+
Sbjct: 572 VGACHEQGNIIIGERSARRLLEMKTDNAGHYVLIANMYAAAGCWNELATVRKLMRDLGVM 631
Query: 542 KEAGVSW 548
K G++W
Sbjct: 632 KAPGLAW 638
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 207/492 (42%), Gaps = 78/492 (15%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L+ + +H A A + F LV +YA + +AR +F+ R
Sbjct: 165 VLRACAETANLALGRAVHVRAADAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRD 224
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI------------------ 110
V WNS+I YA + ++ +A LF+ + + ++ T+ I
Sbjct: 225 VVSWNSMISGYAASGQWREAVELFRRMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIR 284
Query: 111 -----------------TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
+ ACS L + +HG A+ +A++T Y++ +
Sbjct: 285 DMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCN 344
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
++ A+ +F + P LV N+MI+GFA + + ++F M+ P+ T+V ++
Sbjct: 345 DMEHALMLFRMMRCPGLVAWNTMIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLA 404
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
+ L G+ +H +K F Y + + L+ MY++ ++ A +VF+++ D+++
Sbjct: 405 LCARVANLQHGRELHTHIIKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDHDMIS 464
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
++++I G+ QG +L +F+++ G D +++ +VL+A + S V G + ++
Sbjct: 465 FTSMIAGFGMQGKGIVSLRFFKRMIDSGIMPDAIIMVTVLSACSHSGLVDEGEELFDKMV 524
Query: 334 Q-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+ +G + + S +VD+Y++ G L
Sbjct: 525 KSYGIKPQMEHYSCMVDLYARAGLL----------------------------------- 549
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE---HYIYM 449
E +++ + P ST A L CH G I + ++ KT+ HY+ +
Sbjct: 550 EKAEELLNQTPFPPTSTMVAALVGACH----EQGNIIIGERSARRLLEMKTDNAGHYVLI 605
Query: 450 VKLLGLAGNLEE 461
+ AG E
Sbjct: 606 ANMYAAAGCWNE 617
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 131/299 (43%), Gaps = 36/299 (12%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N +IS G +L + M+ + PD +T ++ E + L++G+ +H
Sbjct: 127 NVLISACLSHGLPRHALAAYQEMIDKDAVPPDAFTYPKVLRACAETANLALGRAVHVRAA 186
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ D + + + LVSMYA+C + +A VF + H D+V+W+++I+GY+ G + +A+
Sbjct: 187 DAGMDGHLFCQNALVSMYAKCGDVVAARGVFEGMEHRDVVSWNSMISGYAASGQWREAVE 246
Query: 293 YFRKLNMQGKKADPV---------------------------------LIASVLAAAAKS 319
FR++ +G + + V + V+ + A S
Sbjct: 247 LFRRMQAEGAEVNSVTWNTIAGGYIQMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACS 306
Query: 320 ANVW--PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
W G IHG ++ V +A++ MY++C + + +F M ++ +N+
Sbjct: 307 RAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCNDMEHALMLFRMMRCPGLVAWNT 366
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+I G L A FR+++ + P+ T L C + GRE+ T + ++
Sbjct: 367 MIAGFALSDDAEAASRIFREMVCSDVQPNYVTVVTYLALCARVANLQHGRELHTHIIKQ 425
>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 833
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 268/542 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S L+ KE+HA V A + D T LV +Y + AR +FD R
Sbjct: 164 VLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRD 223
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +N ++ YA + + A LF + + LKP+ ++ I C L + VH
Sbjct: 224 VSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHA 283
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +GL D +++L+ Y+ I+ A +VFD + D+V MI G+A G +
Sbjct: 284 QCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIED 343
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+ LF M G PD T + +++ + L+ + IH + F + VS+ LV
Sbjct: 344 AFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLVSTALVH 403
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A VF+++ D+V+WSA+I Y + G +A F + + D V
Sbjct: 404 MYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNIEPDGVT 463
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
++L A + G I+ I+ V + +AL+ M +K G + +F+TM
Sbjct: 464 YINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERARYIFDTMV 523
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R++IT+N++I G LHG +A F ++++ P+ TF +L AC G V++GR
Sbjct: 524 RRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRR 583
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
FT + E GI + Y MV LLG AG L+EA I S+P ++ +LL C I+
Sbjct: 584 FFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIH 643
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
GN D+AE A + DP GA V LS+ YA G W++V K+R + G+RKE G +W
Sbjct: 644 GNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIRKEQGCTW 703
Query: 549 VS 550
+
Sbjct: 704 IE 705
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/389 (31%), Positives = 213/389 (54%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L++LY++ + AR +FD ++V WN++I YA +A +LF+ ++ L+P
Sbjct: 98 LIKLYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPS 157
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
T+ + ACS + L + VH + +G D +ALV+ Y K +D+A +VFD
Sbjct: 158 IITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFD 217
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
G+ D+ N M+ G+A G W+K+ +LF M ++G P++ + + ++ G W P L+
Sbjct: 218 GLHIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAW 277
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +H C+ + V++ L+ MY C + A VF+++ D+V+W+ +I GY++
Sbjct: 278 GKAVHAQCMNAGLVDDIRVATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAE 337
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G+ A F + +G + D + ++ A A SAN+ IH V GF ++V
Sbjct: 338 NGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLLV 397
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S+ALV MY+KCG + QVF+ M R++++++++I +G+ +AFE F + +
Sbjct: 398 STALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSNI 457
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTR 432
PD T+ LL AC H G ++ G EI+T+
Sbjct: 458 EPDGVTYINLLNACGHLGALDVGMEIYTQ 486
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 164/331 (49%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D+ TY + + C+E D + V I G + + L+ YS + EA ++F
Sbjct: 56 DSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYSICGNVTEARQIF 115
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D V + +V N++I+G+A G ++ LF M+ G P T + ++ P+ L+
Sbjct: 116 DSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLN 175
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G+ +H + + F S + + LVSMY + M+ A VF+ L D+ T++ ++ GY+
Sbjct: 176 WGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIRDVSTFNVMVGGYA 235
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ GD+ KA F ++ G K + + S+L + G +H + G +
Sbjct: 236 KSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVDDIR 295
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V+++L+ MY+ CG + +VF+ M R+++++ +I G +G AF F + E+G
Sbjct: 296 VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEG 355
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+ PD T+ ++ AC +N REI +++
Sbjct: 356 IQPDRITYMHIMNACAISANLNHAREIHSQV 386
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 152/345 (44%), Gaps = 38/345 (11%)
Query: 194 DWMLRLGKTP---DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
D + RLG+ D T V L E ++G+ + ++ Y + L+ +Y
Sbjct: 43 DVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLY 102
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+ C + A +F+S+ + +VTW+ALI GY+Q G +A FR++ +G + +
Sbjct: 103 SICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFL 162
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SVL A + A + G +H V+ GF + +ALV MY K G + QVF+ + R
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGLHIR 222
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL---------------- 414
++ T+N ++ G G +AFE F + + GL P++ +F ++L
Sbjct: 223 DVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKAVH 282
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTE---------------HYIYMVKLLGLAGNL 459
C + GLV+D R + T + Y E + M++ GN+
Sbjct: 283 AQCMNAGLVDDIR-VATSLIRMYTTCGSIEGARRVFDNMKVRDVVSWTVMIEGYAENGNI 341
Query: 460 EEAYSFIWSLPKP---VDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
E+A+ ++ + D +++ C I N + A + Q+
Sbjct: 342 EDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQV 386
>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Vitis vinifera]
Length = 852
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 182/578 (31%), Positives = 286/578 (49%), Gaps = 51/578 (8%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV---FLWNSIIRAYAL 81
+HA+V + + F LV +Y +AR +FD+ +R V WNSI+ AY
Sbjct: 148 VHAVVFASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQ 207
Query: 82 AHRFNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A +F+ + ++PD + + AC+ + VHG A+ SGL D
Sbjct: 208 GGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVF 267
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD------ 194
+A+V Y+K +++EA KVF+ + D+V N+M++G++ G +D +L LF+
Sbjct: 268 VGNAVVDMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEK 327
Query: 195 -------W---------------------MLRL-GKTPDEYTLVGLISGLWEPSLLSVGQ 225
W +RL G P+ TLV L+SG L G+
Sbjct: 328 IELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGK 387
Query: 226 GIHGFCLK--SSFDSYD-----YVSSVLVSMYARCNCMNSAYHVFNSLFHPD--LVTWSA 276
H +K + D D V + L+ MY++C +A +F+ + D +VTW+
Sbjct: 388 ETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTV 447
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWPGAVIHGYVIQ 334
LI G +Q G+ +AL F ++ P I+ L A A+ + G IH YV++
Sbjct: 448 LIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLR 507
Query: 335 HGFELSVM-VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ FE +++ V++ L+DMYSK G + VF+ M +RN +++ S++ G G+HG +A +
Sbjct: 508 NRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQ 567
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F ++ + GL PD TF +L AC H G+V+ G F M +++G+ EHY MV LL
Sbjct: 568 IFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLL 627
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
AG L+EA I +P PAV ALLS C +Y N +L E A+QL E +
Sbjct: 628 SRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQLLELESGNDGSYT 687
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
+LSN YA W DV ++R + + G++K G SWV G
Sbjct: 688 LLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQG 725
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 214/468 (45%), Gaps = 61/468 (13%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLY-ALNNVLPSARILFDKTPQ-RSVFLWNS 74
+SL+ + +H + L DP T ++ +Y N+ + +L P +VF WN
Sbjct: 40 KSLASAELIHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQ 96
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAI 131
+IR D L++ + R +PD++T+ + +AC E +P R VH
Sbjct: 97 LIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGE---IPSFRCGASVHAVVF 153
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP---DLVLCNSMISGFAHCGFWDK 188
SG + + LV+ Y + + A +VFD + + DLV NS+++ + G +
Sbjct: 154 ASGFEWNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIR 213
Query: 189 SLQLFDWMLR-LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++++F+ M LG PD +LV ++ S G+ +HG+ L+S +V + +V
Sbjct: 214 AMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVV 273
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG------------------- 288
MYA+C M A VF + D+V+W+A++TGYSQ G +
Sbjct: 274 DMYAKCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVV 333
Query: 289 ----------------KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+AL FR++ + G + + V + S+L+ A + + G H +
Sbjct: 334 TWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHA 393
Query: 333 IQHGFEL-------SVMVSSALVDMYSKCGYLGLGIQVFETM--SERNIITYNSVILGLG 383
I+ L +MV +AL+DMYSKC +F+ + +R+++T+ +I G
Sbjct: 394 IKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNA 453
Query: 384 LHGFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVNDGREI 429
HG +A E F +++ + P+ T S L AC G + GR+I
Sbjct: 454 QHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQI 501
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 156/321 (48%), Gaps = 11/321 (3%)
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMI 177
L +H +V GL D + +++ Y + +A+ V + S + N +I
Sbjct: 42 LASAELIHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLI 98
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
H GF + LQL+ M RLG PD YT ++ E G +H S F+
Sbjct: 99 RRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFE 158
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP---DLVTWSALITGYSQQGDYGKALYYF 294
+V + LVSMY RC +A VF+ + DLV+W++++ Y Q GD +A+ F
Sbjct: 159 WNVFVGNGLVSMYGRCGAWENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMF 218
Query: 295 RKLNMQ-GKKADPVLIASVLAAAAKSANVWP-GAVIHGYVIQHGFELSVMVSSALVDMYS 352
++ G + D V + +VL A A S W G +HGY ++ G V V +A+VDMY+
Sbjct: 219 ERMTEDLGIRPDAVSLVNVLPACA-SVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYA 277
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG + +VFE M ++++++N+++ G G A F I E+ + + T+SA
Sbjct: 278 KCGMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSA 337
Query: 413 LLCACCHGGLVNDGREIFTRM 433
++ GL + ++F +M
Sbjct: 338 VIAGYAQRGLGFEALDVFRQM 358
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 177/407 (43%), Gaps = 48/407 (11%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S + SR K++H ++ L D F +V +YA ++ A +F++ +
Sbjct: 237 VLPACASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKCGMMEEANKVFERMKVKD 296
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACIT----------------- 111
V WN+++ Y+ RF+DA LF+ + +++ + T++ +
Sbjct: 297 VVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFR 356
Query: 112 --RACSENSDLPGLRFVHGGAIVSGL-----------------------GRDSITSSALV 146
R C ++ L + G ++G G D + +AL+
Sbjct: 357 QMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINALI 416
Query: 147 TAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK--T 202
YSK A +FD + D +V +I G A G +++L+LF ML+
Sbjct: 417 DMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVM 476
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS-YDYVSSVLVSMYARCNCMNSAYH 261
P+ +T+ + L G+ IH + L++ F+S +V++ L+ MY++ +++A
Sbjct: 477 PNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARV 536
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+++ + V+W++L+TGY G +AL F ++ G D V VL A + S
Sbjct: 537 VFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGM 596
Query: 322 VWPGA-VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
V G +G G + +VD+ S+ G L +++ M
Sbjct: 597 VDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGM 643
>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 684
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/558 (29%), Positives = 268/558 (48%), Gaps = 37/558 (6%)
Query: 28 LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFND 87
+V+K P + KL++ + L A LFDK P+ + W +I +
Sbjct: 1 MVSKLPANLQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKK 60
Query: 88 AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVT 147
A ++ LL ++PD F + +AC+ + DL + +H AI G +D + +AL+
Sbjct: 61 AIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALID 120
Query: 148 AYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT 207
+ K ++ A VFD + D+V SM + +CG + + LF M G + T
Sbjct: 121 MFGKCKFVNGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLT 180
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
+ ++ + + +G+ +HGF L++ + YVSS LV+MYA + A VF+S++
Sbjct: 181 VSSILPACAD--YIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMY 238
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK------------------------ 303
H D+V+W+ ++T Y +Y + L F ++ +G K
Sbjct: 239 HRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALG 298
Query: 304 -----------ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
+ + I S L ++ G IHGYV +H F V +++ALV +Y+
Sbjct: 299 ILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYA 358
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG L L VF TM ++++ +N++I+ +HG ++ F +++ G+ P+ TF
Sbjct: 359 KCGDLELSRHVFNTMPRKDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIG 418
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+L C H L ++G +F M+ E+ I +HY MV +L AG LEEAY FI +P
Sbjct: 419 VLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIE 478
Query: 473 VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
A GALL C +Y N +L + A QLFE +P V+LSN +W + ++R
Sbjct: 479 PTAAAWGALLGACRVYKNVELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIR 538
Query: 533 DDIVDNGLRKEAGVSWVS 550
+ D GL K G SWV
Sbjct: 539 KMMRDKGLAKTPGRSWVQ 556
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 41/390 (10%)
Query: 7 FLVLELSKSHQS---LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
F++L ++K+ + L K++H + +D L+ ++ + AR +FD
Sbjct: 78 FVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNGARCVFDD 137
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+ V W S+ Y LF+ + ++ ++ T + I AC++ L
Sbjct: 138 MVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACADYIKLG-- 195
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R VHG + + + + SSALV Y+ + +A VFD + D+V N M++ +
Sbjct: 196 REVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLN 255
Query: 184 GFWDKSLQLFDWMLRL-----------------------------------GKTPDEYTL 208
+++ L LF M + G P+ T+
Sbjct: 256 KEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITI 315
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
V + G L G+ IHG+ + F +++ LV +YA+C + + HVFN++
Sbjct: 316 VSALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPR 375
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG-AV 327
D+V W+ +I S G G++L F K+ G + + V VL+ + S G V
Sbjct: 376 KDVVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLV 435
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ +H S +VD+ S+ G L
Sbjct: 436 FNSMSSEHSITPDADHYSCMVDVLSRAGRL 465
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL KE+H V + + D T LV LYA L +R +F+ P++ V WN++I
Sbjct: 326 ESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKDVVAWNTMI 385
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL--PGLRFVHGGAIVSG 134
A ++ + ++ LF +L + ++P++ T+ + CS +S L GL + +
Sbjct: 386 MANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCS-HSQLADEGLLVFNSMSSEHS 444
Query: 135 LGRDSITSSALVTAYSKLSLIDEA 158
+ D+ S +V S+ ++EA
Sbjct: 445 ITPDADHYSCMVDVLSRAGRLEEA 468
>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 738
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 157/496 (31%), Positives = 265/496 (53%), Gaps = 5/496 (1%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACS 115
AR +FD +R + WNS+I AY + HR + +A +++ ++ + PD +T + + +A S
Sbjct: 118 ARQVFDGMSERHIVTWNSLI-AYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFS 176
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSI-TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCN 174
+ S + HG A++ GL ++ SALV Y K EA V D V + D+VL
Sbjct: 177 DLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLIT 236
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
++I G++ G ++++ F ML P+EYT ++ + G+ IHG +KS
Sbjct: 237 ALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKS 296
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
F+S + L++MY RC+ ++ + VF + +P+ V+W++LI+G Q G AL F
Sbjct: 297 GFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEF 356
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
RK+ K + ++S L + A G IHG V ++GF+ S L+D+Y KC
Sbjct: 357 RKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC 416
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G + VF+T+SE ++I+ N++I +GF +A + F +I GL P++ T ++L
Sbjct: 417 GCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVL 476
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC + LV +G E+F ++ I +HY MV LLG AG LEEA + P D
Sbjct: 477 LACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINP-D 534
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
+ LLS C ++ ++AE + ++ E +P +++SN YA G+W+ V++++
Sbjct: 535 LVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSK 594
Query: 535 IVDNGLRKEAGVSWVS 550
+ D L+K +SWV
Sbjct: 595 MKDMKLKKNPAMSWVE 610
>gi|334185017|ref|NP_186807.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546765|sp|Q9SS97.2|PP205_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g01580
gi|332640170|gb|AEE73691.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 266 bits (679), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 274/522 (52%), Gaps = 4/522 (0%)
Query: 25 LHALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+H V K +L D + + L+ +Y + A +FD+ + + W+S++ +
Sbjct: 82 IHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNG 141
Query: 84 RFNDAKSLFKNL-LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A F+ + + + + PD T + AC++ S+ R VHG I G D
Sbjct: 142 SPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV 201
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+K EA+ +F +++ D++ +++I+ + G ++L +F+ M+ G
Sbjct: 202 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 261
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T++ ++ L G+ H ++ ++ VS+ LV MY +C AY V
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSAN 321
F+ + D+V+W ALI+G++ G +++ F + ++ + D +L+ VL + ++
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ H YVI++GF+ + + ++LV++YS+CG LG +VF ++ ++ + + S+I G
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 382 LGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G+HG +A E F +++ + P+E TF ++L AC H GL+++G IF M +Y +
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 501
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY +V LLG G+L+ A +P P + G LL C I+ N ++AE VA +
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 561
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
LFE + Y +++SN Y G W++V KLR+ + G++K
Sbjct: 562 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 603
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 207/415 (49%), Gaps = 16/415 (3%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR +F + +RS++ WN+++++ + ++ + F ++ R + KPDNFT +AC E
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 117 NSDLPGLRFVHGGAIVSG-------LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
LR V+ G ++ G LG D S+L+ Y K + EA+++FD + PD
Sbjct: 73 ------LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPD 126
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIH 228
+V +SM+SGF G ++++ F M+ TPD TL+ L+S + S +G+ +H
Sbjct: 127 IVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVH 186
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
GF ++ F + + + L++ YA+ A ++F + D+++WS +I Y Q G
Sbjct: 187 GFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAA 246
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+AL F + G + + + VL A A + ++ G H I+ G E V VS+ALV
Sbjct: 247 EALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALV 306
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD-IIEKGLNPDE 407
DMY KC VF + ++++++ ++I G L+G +++ E F ++E PD
Sbjct: 307 DMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDA 366
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+L +C G + + F +YG + +V+L G+L A
Sbjct: 367 ILMVKVLGSCSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 420
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 185/363 (50%), Gaps = 5/363 (1%)
Query: 151 KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
K S +A ++F ++ L N+++ + W++ L F M R + PD +TL
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 211 LISGLWEPSLLSVGQGIHGFCLKS-SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
+ E ++ G+ IHGF K + S YV S L+ MY +C M A +F+ L P
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSANVWPGAVI 328
D+VTWS++++G+ + G +A+ +FR++ M D V + ++++A K +N G +
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCV 185
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
HG+VI+ GF + + ++L++ Y+K + +F+ ++E+++I++++VI +G
Sbjct: 186 HGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAA 245
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
+A F D+++ G P+ +T +L AC + GR+ + G++ + +
Sbjct: 246 AEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTH-ELAIRKGLETEVKVSTA 304
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA-EIVAHQLFENDPR 507
+V + + EEAY+ +P+ D AL+S + G + + E + L EN+ R
Sbjct: 305 LVDMYMKCFSPEEAYAVFSRIPRK-DVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTR 363
Query: 508 KGA 510
A
Sbjct: 364 PDA 366
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K H+ V K +PF LV LY+ L +A +F+ + +W S+I
Sbjct: 382 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 441
Query: 79 YALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
Y + + A F ++++ +++KP+ T+ I ACS H G I GL
Sbjct: 442 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS-----------HAGLIHEGL 488
>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
Length = 634
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/499 (31%), Positives = 254/499 (50%), Gaps = 6/499 (1%)
Query: 56 SARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
SAR++ TP R+V W S+I A F+ A F + R + P++FT+ C +A +
Sbjct: 10 SARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVA 69
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
+ +H A+ G D + Y K L D+A K+FD + + +L N+
Sbjct: 70 SLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 129
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
IS G ++++ F R+ P+ T ++ + L++G +HG L+S
Sbjct: 130 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 189
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
FD+ V + L+ Y +C + S+ +F + + V+W +L+ Y Q + KA +
Sbjct: 190 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 249
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + +I+SVL+A A A + G IH + ++ E ++ V SALVDMY KCG
Sbjct: 250 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 309
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES--TFSAL 413
+ Q F+ M E+N++T NS+I G G A F ++ +G P + TF +L
Sbjct: 310 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 369
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV 473
L AC G V +G +IF M YGI+ EHY +V +LG AG +E AY FI + P+
Sbjct: 370 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKM--PI 427
Query: 474 DPAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
P +S GAL + C ++G L + A LF+ DP+ V+LSNT+A GRW + +
Sbjct: 428 QPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTV 487
Query: 532 RDDIVDNGLRKEAGVSWVS 550
R+++ G++K AG SW++
Sbjct: 488 REELKGVGIKKGAGYSWIT 506
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 156/355 (43%), Gaps = 3/355 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HAL K + D F +Y + AR LFD+ P+R++ WN+ I
Sbjct: 78 KQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTD 137
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R +A F R P++ T+ ACS+ L +HG + SG D
Sbjct: 138 GRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVC 197
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L+ Y K I + +F + + V S+++ + +K+ L+ +
Sbjct: 198 NGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVE 257
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
++ + ++S + L +G+ IH +K+ + +V S LV MY +C C+ +
Sbjct: 258 TSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQA 317
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSA 320
F+ + +LVT ++LI GY+ QG AL F ++ +G P + S+L+A +++
Sbjct: 318 FDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAG 377
Query: 321 NVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
V G I + +G E S +VDM + G + + + M + I+
Sbjct: 378 AVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTIS 432
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 131/309 (42%), Gaps = 16/309 (5%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH LV ++ D L+ Y + S+ I+F + ++ W S++ AY H
Sbjct: 180 QLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNH 239
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A L+ + ++ +F + + AC+ + L R +H A+ + + R S
Sbjct: 240 EDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGS 299
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR--LGK 201
ALV Y K I+++ + FD + + +LV NS+I G+AH G D +L LF+ M G
Sbjct: 300 ALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGP 359
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYARCNCMNSA 259
TP+ T V L+S + G I ++S++ S +V M R + A
Sbjct: 360 TPNYMTFVSLLSACSRAGAVENGMKIFD-SMRSTYGIEPGAEHYSCIVDMLGRAGMVERA 418
Query: 260 YHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP------VLIASV 312
Y + P + W AL G L L K DP VL+++
Sbjct: 419 YEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLF----KLDPKDSGNHVLLSNT 474
Query: 313 LAAAAKSAN 321
AAA + A
Sbjct: 475 FAAAGRWAE 483
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 140/331 (42%), Gaps = 17/331 (5%)
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
YSKL + A V ++V S+ISG A G + +L F M R G P+++T
Sbjct: 2 YSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTF 61
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH 268
+ L G+ IH +K +V MY + + A +F+ +
Sbjct: 62 PCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPE 121
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
+L TW+A I+ G +A+ F + + + + L A + ++ G +
Sbjct: 122 RNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQL 181
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
HG V++ GF+ V V + L+D Y KC + +F M +N +++ S++ +
Sbjct: 182 HGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHED 241
Query: 389 YQAFEFF----RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+A + +DI+E + S++L AC + GR I + ++A E
Sbjct: 242 EKASVLYLRSRKDIVET----SDFMISSVLSACAGMAGLELGRSIHA-----HAVKACVE 292
Query: 445 HYIY----MVKLLGLAGNLEEAYSFIWSLPK 471
I+ +V + G G +E++ +P+
Sbjct: 293 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPE 323
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY++ + SA V ++V+W++LI+G +Q G + AL F ++ +G +
Sbjct: 1 MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
A A G IH ++ G L V V + DMY K ++F+ +
Sbjct: 61 FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
ERN+ T+N+ I G +A E F + +P+ TF A L AC
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 169
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 2/110 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL L + +HA KA + R F + LV +Y + + FD+ P+++
Sbjct: 266 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 325
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL--KPDNFTYACITRACSE 116
+ NS+I YA + + A +LF+ + P+ T+ + ACS
Sbjct: 326 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSR 375
>gi|6016735|gb|AAF01561.1|AC009325_31 hypothetical protein [Arabidopsis thaliana]
Length = 641
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 146/522 (27%), Positives = 274/522 (52%), Gaps = 4/522 (0%)
Query: 25 LHALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+H V K +L D + + L+ +Y + A +FD+ + + W+S++ +
Sbjct: 63 IHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNG 122
Query: 84 RFNDAKSLFKNL-LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A F+ + + + + PD T + AC++ S+ R VHG I G D
Sbjct: 123 SPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLV 182
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+K EA+ +F +++ D++ +++I+ + G ++L +F+ M+ G
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE 242
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T++ ++ L G+ H ++ ++ VS+ LV MY +C AY V
Sbjct: 243 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSAN 321
F+ + D+V+W ALI+G++ G +++ F + ++ + D +L+ VL + ++
Sbjct: 303 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 362
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ H YVI++GF+ + + ++LV++YS+CG LG +VF ++ ++ + + S+I G
Sbjct: 363 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 422
Query: 382 LGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G+HG +A E F +++ + P+E TF ++L AC H GL+++G IF M +Y +
Sbjct: 423 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLA 482
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY +V LLG G+L+ A +P P + G LL C I+ N ++AE VA +
Sbjct: 483 PNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKK 542
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
LFE + Y +++SN Y G W++V KLR+ + G++K
Sbjct: 543 LFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKK 584
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 202/406 (49%), Gaps = 16/406 (3%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+RS++ WN+++++ + ++ + F ++ R + KPDNFT +AC E LR
Sbjct: 3 KRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE------LRE 56
Query: 126 VHGGAIVSG-------LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
V+ G ++ G LG D S+L+ Y K + EA+++FD + PD+V +SM+S
Sbjct: 57 VNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVS 116
Query: 179 GFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
GF G ++++ F M+ TPD TL+ L+S + S +G+ +HGF ++ F
Sbjct: 117 GFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFS 176
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ + + L++ YA+ A ++F + D+++WS +I Y Q G +AL F +
Sbjct: 177 NDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDM 236
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + + + VL A A + ++ G H I+ G E V VS+ALVDMY KC
Sbjct: 237 MDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP 296
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD-IIEKGLNPDESTFSALLCA 416
VF + ++++++ ++I G L+G +++ E F ++E PD +L +
Sbjct: 297 EEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 356
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
C G + + F +YG + +V+L G+L A
Sbjct: 357 CSELGFLEQAK-CFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA 401
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K H+ V K +PF LV LY+ L +A +F+ + +W S+I
Sbjct: 363 LEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITG 422
Query: 79 YALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
Y + + A F ++++ +++KP+ T+ I ACS H G I GL
Sbjct: 423 YGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACS-----------HAGLIHEGL 469
>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
Length = 906
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/533 (29%), Positives = 272/533 (51%), Gaps = 31/533 (5%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
SR K +H + K DPF A LV +YA L A +F+K Q + WN++I
Sbjct: 275 SRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGC 334
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
L A L + R +H + + D
Sbjct: 335 VLHEHHEQALELLGQMKRQ---------------------------LHSSLMKMDMESDL 367
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD--KSLQLFDWML 197
S LV YSK L+++A F+ + + DL+ N++ISG++ +W+ ++L LF M
Sbjct: 368 FVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWNAIISGYSQ--YWEDMEALSLFVEMH 425
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G ++ TL ++ ++ V + +HG +KS F S YV + L+ Y +C+ +
Sbjct: 426 KEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVE 485
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F DLV+++++IT Y+Q G +AL F ++ K D + +S+L A A
Sbjct: 486 DAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACA 545
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G +H +++++GF L + ++LV+MY+KCG + + F ++ER I+++++
Sbjct: 546 NLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSA 605
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I GL HG QA + F ++++G++P+ T ++L AC H GLV + + F M E +
Sbjct: 606 MIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELF 665
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G + EHY M+ LLG AG + EA + +P + +V GALL I+ + +L
Sbjct: 666 GFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRA 725
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A LF +P K V+L+N YA G+W++V ++R + D+ ++KE G+SW+
Sbjct: 726 AEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIE 778
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 111/422 (26%), Positives = 209/422 (49%), Gaps = 28/422 (6%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L K++H +V + D F A LV +YA + ++ LFD+ P+R+V WN++
Sbjct: 171 KDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALF 230
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y +A LF ++ + +KP+ F+ + + AC+ D + +HG I G
Sbjct: 231 SCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYD 290
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D +++ALV Y+K+ + +AI VF+ + PD+V N++I+G +++L+L M
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQM 350
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R +H +K +S +VS LV MY++C+ +
Sbjct: 351 KR---------------------------QLHSSLMKMDMESDLFVSVGLVDMYSKCDLL 383
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A FN L DL+ W+A+I+GYSQ + +AL F +++ +G + ++++L +
Sbjct: 384 EDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKST 443
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A V +HG ++ GF + V ++L+D Y KC ++ ++FE + +++++
Sbjct: 444 AGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFT 503
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S+I +G +A + F ++ + L PD S+LL AC + G+++ + +
Sbjct: 504 SMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHIL-K 562
Query: 437 YG 438
YG
Sbjct: 563 YG 564
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 137/569 (24%), Positives = 243/569 (42%), Gaps = 72/569 (12%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+SL ++HA + K+ L DP L+ LY+ AR L D++ + + W+++I
Sbjct: 70 KSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARKLVDESSEPDLVSWSALI 129
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA A F + +K + FT++ + +ACS DL + VHG +VSG
Sbjct: 130 SGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKDLRIGKQVHGVVVVSGFE 189
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D ++ LV Y+K ++ ++FD + + ++V N++ S + F +++ LF M
Sbjct: 190 GDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSCYVQXDFCGEAVGLFYEM 249
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P+E++L +++ S G+ IHG+ +K +D + ++ LV MYA+ +
Sbjct: 250 VLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSANALVDMYAKVGDL 309
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF + PD+V+W+A+I G + +AL ++ Q
Sbjct: 310 ADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQ---------------- 353
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+H +++ E + VS LVDMYSKC L F + E+++I +N
Sbjct: 354 -----------LHSSLMKMDMESDLFVSVGLVDMYSKCDLLEDARMAFNLLPEKDLIAWN 402
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL-----------CACCHGGLVND 425
++I G + +A F ++ ++G+ +++T S +L C HG V
Sbjct: 403 AIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKS 462
Query: 426 GRE----IFTRMTEEYGIQAKTEH---------------YIYMVKLLGLAGNLEEAYSFI 466
G + + + YG + E + M+ G EEA
Sbjct: 463 GFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLF 522
Query: 467 WSLP----KPVDPAVSGALLSCCHIYGNSDLAEIVAHQL---FENDPRKGAYKVMLSNTY 519
+ KP S L +C ++ ++ H L F D G L N Y
Sbjct: 523 LEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNS---LVNMY 579
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
A+ G DD + ++ + G+ VSW
Sbjct: 580 AKCGSIDDAGRAFSELTERGI-----VSW 603
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 161/300 (53%), Gaps = 2/300 (0%)
Query: 97 RTQLKPDNFTYA-CITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ P + +Y+ +++ C+ S PGL+ +H SGL D + L+ YSK
Sbjct: 49 KGNFTPTSVSYSKLLSQCCTTKSLRPGLQ-IHAHITKSGLSDDPSIRNHLINLYSKCRXF 107
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A K+ D S+PDLV +++ISG+A G +L F M LG +E+T ++
Sbjct: 108 GYARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKAC 167
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
L +G+ +HG + S F+ +V++ LV MYA+C+ + +F+ + ++V+W+
Sbjct: 168 SIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWN 227
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
AL + Y Q G+A+ F ++ + G K + ++S++ A + G +IHGY+I+
Sbjct: 228 ALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKL 287
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G++ ++ALVDMY+K G L I VFE + + +I+++N+VI G LH QA E
Sbjct: 288 GYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 145/294 (49%), Gaps = 4/294 (1%)
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
TP + L+S L G IH KS + + L+++Y++C A
Sbjct: 53 TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+ + PDLV+WSALI+GY+Q G G AL F ++++ G K + +SVL A + +
Sbjct: 113 LVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVKD 172
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +HG V+ GFE V V++ LV MY+KC ++F+ + ERN++++N++
Sbjct: 173 LRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEIPERNVVSWNALFSC 232
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR-EIFTRMTEEYGIQ 440
F +A F +++ G+ P+E + S+++ AC GL + R +I + G
Sbjct: 233 YVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACT--GLRDSSRGKIIHGYLIKLGYD 290
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+V + G+L +A S + +P D A+++ C ++ + + A
Sbjct: 291 WDPFSANALVDMYAKVGDLADAISVFEKIKQP-DIVSWNAVIAGCVLHEHHEQA 343
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 12/322 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + Q + +++H L K+ D + L+ Y + + A +F++
Sbjct: 439 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 498
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ + S+I AYA + +A LF + +LKPD F + + AC+ S + +H
Sbjct: 499 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 558
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G D ++LV Y+K ID+A + F +++ +V ++MI G A G +
Sbjct: 559 HILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQHGHGRQ 618
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+LQLF+ ML+ G +P+ TLV ++ +GL + L F K + Y
Sbjct: 619 ALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEELFGFKPMQEHY---- 674
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY--GKALYYFRKLNMQ 300
+ ++ + R +N A + N + F + W AL+ D G+ +
Sbjct: 675 ACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRRAAEMLFILEP 734
Query: 301 GKKADPVLIASVLAAAAKSANV 322
K VL+A++ A+A K NV
Sbjct: 735 EKSGTHVLLANIYASAGKWENV 756
>gi|357507205|ref|XP_003623891.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498906|gb|AES80109.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1288
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/553 (30%), Positives = 277/553 (50%), Gaps = 35/553 (6%)
Query: 31 KASLLRDPFYATKLVRLYALN--NVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDA 88
K L DP L++ YAL+ N+L A LF + P+ ++ WN +IR ++ ++ +A
Sbjct: 722 KELLPTDPISIFNLLKSYALSPTNIL-KANELFRQIPRPTLSHWNIMIRGWSQTNQPIEA 780
Query: 89 KSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
+ + L +N TY + +AC+ S++ VH + G D S+AL+
Sbjct: 781 IRNYNLMYSQALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHG 839
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y+ + A KVFD +S+ DLV NS+I G+ C + + L +F+ M D T+
Sbjct: 840 YAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTM 899
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF- 267
V ++ V + + ++ + Y+ + L+ MY R + ++ A VF+ +
Sbjct: 900 VKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRD 959
Query: 268 ------------------------------HPDLVTWSALITGYSQQGDYGKALYYFRKL 297
H D+++W+++I+ YSQ G +GKA+ F+++
Sbjct: 960 RNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEM 1019
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ K D + +ASVL+A A + G +H Y+ ++ + V +AL+DMY KCG +
Sbjct: 1020 MVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAV 1079
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G+ VFE M +R+ +++ SVI GL ++G A F ++ +G+ P TF +L AC
Sbjct: 1080 EKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLAC 1139
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H G+V+ G E F M YG+ + +HY +V LL +GNL AY FI +P D V
Sbjct: 1140 AHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVV 1199
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
LLS ++GN LAEI +L E DP ++ SNTYA RW+DV+K+R + +
Sbjct: 1200 WRILLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEE 1259
Query: 538 NGLRKEAGVSWVS 550
+ + K + S V
Sbjct: 1260 SNVHKPSASSSVE 1272
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 169/395 (42%), Gaps = 33/395 (8%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA V K D F + L+ YA L AR +FD+ +R + WNS+I Y R
Sbjct: 817 VHARVLKLGFDSDLFVSNALIHGYAGFCELGFARKVFDEMSERDLVSWNSLICGYGRCRR 876
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACS----------------ENS---------- 118
+++ +F+ + +K D T + AC+ EN
Sbjct: 877 YSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLGNT 936
Query: 119 --DLPGLR-FVHGGAIVSGLGRDS--ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
D+ G R V V RD ++ +A++ Y K + A K+FD + D++
Sbjct: 937 LIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVISW 996
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
SMIS ++ G + K+++LF M+ PDE T+ ++S L VG+ +H + K
Sbjct: 997 TSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYIRK 1056
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
++ YV + L+ MY +C + VF + D V+W+++I G + G AL
Sbjct: 1057 YDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSALNL 1116
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYS 352
F + +G + VL A A + V G +G + +VD+ S
Sbjct: 1117 FSLMLREGVRPTHGTFVGVLLACAHAGVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLS 1176
Query: 353 KCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHG 386
+ G LG + + M + +++ + ++ +HG
Sbjct: 1177 RSGNLGRAYEFIKRMPMDPDVVVWRILLSASQVHG 1211
>gi|297842209|ref|XP_002888986.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
gi|297334827|gb|EFH65245.1| hypothetical protein ARALYDRAFT_476599 [Arabidopsis lyrata subsp.
lyrata]
Length = 717
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 174/530 (32%), Positives = 267/530 (50%), Gaps = 10/530 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALN-NVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++HA V K+ D A L+ + + + ++ S R+ D R + N ++ +++
Sbjct: 194 QVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQN 253
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRDS 139
+ A LF +L+ L PD F+ CS S L L VH + SGL D
Sbjct: 254 KKPGKAIRLFTRMLQEGLNPDEFS------VCSLLSVLDCLNLGKQVHSYTLKSGLILDL 307
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
S+L T YSK ++E+ +F + D SMISGF G+ +++ LF ML
Sbjct: 308 TVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDE 367
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G +PDE TL +++ L + IHG+ L++ D + S LV+ Y++C + A
Sbjct: 368 GTSPDESTLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLA 427
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
V++ L D V+ S+LI+GYSQ G FR + M G D I+S+L AA S
Sbjct: 428 RKVYDRLPEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAVLS 487
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
GA +H Y+ + G V S+L+ MYSK G + + F ++ ++I + ++I
Sbjct: 488 EESELGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIEDCCKAFSQINGPDLIAWTALI 547
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
HG +A + + + EKG PD+ TF +L AC HGGLV +G M ++YGI
Sbjct: 548 ASYAQHGKANEALQVYCLMKEKGFKPDKVTFVGVLSACSHGGLVEEGYFHLNSMVKDYGI 607
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ + HY+ MV LG +G L EA +FI + P D V G LL+ C IYG+ +L ++ A
Sbjct: 608 EPENRHYVCMVDALGRSGRLREAENFINTRPIKPDALVWGTLLAACKIYGDVELGKLAAK 667
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ E +P V LSN AE G WD+V + R + G++KE G S V
Sbjct: 668 KAIELEPSDAGAYVSLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 717
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 253/536 (47%), Gaps = 41/536 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S + L K + A V K D F T +V LYA + AR +F + S
Sbjct: 79 VLAACASLEELRFGKVVQARVIKCGA-EDVFVCTSIVDLYAKCGHMAEAREVFSRISNPS 137
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W ++ Y ++ A +F+ + + ++ ++ T + AC S + VH
Sbjct: 138 VVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMVCEASQVHA 197
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV-LCNSMISGFAHCGFWD 187
SG D+ ++AL++ SK I+ + +VF+ + D + N M++ F+
Sbjct: 198 WVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIVNVMVTSFSQNKKPG 257
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
K+++LF ML+ G PDE+++ L+S L L++G+ +H + LKS V S L
Sbjct: 258 KAIRLFTRMLQEGLNPDEFSVCSLLSVL---DCLNLGKQVHSYTLKSGLILDLTVGSSLF 314
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
+MY++C + +Y +F + D W+++I+G+++ G +A+ F ++ +G D
Sbjct: 315 TMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDES 374
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A+VL + ++ IHGY ++ G + + + SALV+ YSKCG L L +V++ +
Sbjct: 375 TLAAVLTVCSSLPSLPRSKEIHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRL 434
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
E + ++ +S+I G HG F FRD++ G + D S++L A
Sbjct: 435 PEMDPVSCSSLISGYSQHGLVQDGFLLFRDMVMSGFSMDSYAISSILKAAV--------- 485
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
++EE + A+ YI + L +P+V +LL+
Sbjct: 486 -----LSEESELGAQVHAYITKIGLC-------------------TEPSVGSSLLTMYSK 521
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKE 543
+G+ + Q+ N P A+ +++ +YA+ G+ ++ +++ + + G + +
Sbjct: 522 FGSIEDCCKAFSQI--NGPDLIAWTALIA-SYAQHGKANEALQVYCLMKEKGFKPD 574
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 208/445 (46%), Gaps = 11/445 (2%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
+ L+ ++ N A +F T +V+ WN+II + LF + K
Sbjct: 11 SSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNGFQK 70
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD++TY+ + AC+ +L + V I G D +++V Y+K + EA +V
Sbjct: 71 PDSYTYSSVLAACASLEELRFGKVVQARVIKCG-AEDVFVCTSIVDLYAKCGHMAEAREV 129
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
F +S+P +V M+SG+ +L++F M G + T+ +IS PS++
Sbjct: 130 FSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRPSMV 189
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL---FHPDLVTWSALI 278
+H + KS F V++ L+SM ++ +N + VF L ++V + ++
Sbjct: 190 CEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--NVMV 247
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
T +SQ GKA+ F ++ +G D + S+L + N+ G +H Y ++ G
Sbjct: 248 TSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLL-SVLDCLNL--GKQVHSYTLKSGLI 304
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
L + V S+L MYSKCG L +F+ + ++ + S+I G +G+ +A F ++
Sbjct: 305 LDLTVGSSLFTMYSKCGSLEESYSLFQEIPFKDNACWASMISGFNEYGYLREAIGLFSEM 364
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+++G +PDEST +A+L C + +EI T GI +V G+
Sbjct: 365 LDEGTSPDESTLAAVLTVCSSLPSLPRSKEIHG-YTLRAGIDRGMPLGSALVNTYSKCGS 423
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLS 483
L+ A LP+ +DP +L+S
Sbjct: 424 LKLARKVYDRLPE-MDPVSCSSLIS 447
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 180/423 (42%), Gaps = 35/423 (8%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
F V L L+ K++H+ K+ L+ D + L +Y+ L + LF + P
Sbjct: 275 EFSVCSLLSVLDCLNLGKQVHSYTLKSGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIP 334
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ W S+I + +A LF +L PD T A + CS LP +
Sbjct: 335 FKDNACWASMISGFNEYGYLREAIGLFSEMLDEGTSPDESTLAAVLTVCSSLPSLPRSKE 394
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG + +G+ R SALV YSK + A KV+D + + D V C+S+ISG++ G
Sbjct: 395 IHGYTLRAGIDRGMPLGSALVNTYSKCGSLKLARKVYDRLPEMDPVSCSSLISGYSQHGL 454
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
LF M+ G + D Y + ++ +G +H + K + V S
Sbjct: 455 VQDGFLLFRDMVMSGFSMDSYAISSILKAAVLSEESELGAQVHAYITKIGLCTEPSVGSS 514
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
L++MY++ + F+ + PDL+ W+ALI Y+Q G +AL + + +G K D
Sbjct: 515 LLTMYSKFGSIEDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYCLMKEKGFKPD 574
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVF 364
V VL+A + HG +++ G F L+ MV ++ ++
Sbjct: 575 KVTFVGVLSACS-----------HGGLVEEGYFHLNSMVKDYGIEPENR----------- 612
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
Y ++ LG G +A F I + + PD + LL AC G V
Sbjct: 613 ---------HYVCMVDALGRSGRLREAENF---INTRPIKPDALVWGTLLAACKIYGDVE 660
Query: 425 DGR 427
G+
Sbjct: 661 LGK 663
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 175/353 (49%), Gaps = 11/353 (3%)
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ S+L+ A+SK ++A KVF ++ N++I+G + LF M
Sbjct: 8 VVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCNG 67
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
+ PD YT +++ L G+ + +K + +V + +V +YA+C M A
Sbjct: 68 FQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAEDV-FVCTSIVDLYAKCGHMAEA 126
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + +P +V+W+ +++GY++ D AL FR++ G + + + SV++A +
Sbjct: 127 REVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACGRP 186
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE---RNIITYN 376
+ V + +H +V + GF L V++AL+ M SK G + L +VFE + + +NI+ N
Sbjct: 187 SMVCEASQVHAWVFKSGFYLDTSVAAALISMNSKSGDINLSERVFEDLDDIRRQNIV--N 244
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++ + +A F ++++GLNPDE + +LL +N G+++ + T +
Sbjct: 245 VMVTSFSQNKKPGKAIRLFTRMLQEGLNPDEFSVCSLLSVL---DCLNLGKQVHS-YTLK 300
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYG 489
G+ + + G+LEE+YS +P D A +++S + YG
Sbjct: 301 SGLILDLTVGSSLFTMYSKCGSLEESYSLFQEIPFK-DNACWASMISGFNEYG 352
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 96/191 (50%), Gaps = 1/191 (0%)
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
Y+ V S L+ +++ AY VF ++ W+ +I G + +YG F ++
Sbjct: 6 YEVVQSSLIDAFSKNLRFEDAYKVFRDTLSANVYCWNTIIAGALRNQNYGAVFDLFHEMC 65
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+K D +SVLAA A + G V+ VI+ G E V V +++VD+Y+KCG++
Sbjct: 66 NGFQKPDSYTYSSVLAACASLEELRFGKVVQARVIKCGAE-DVFVCTSIVDLYAKCGHMA 124
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+VF +S +++++ ++ G + A E FR++ G+ + T ++++ AC
Sbjct: 125 EAREVFSRISNPSVVSWTVMLSGYTKSNDAFSALEIFREMRHSGVEINSCTVTSVISACG 184
Query: 419 HGGLVNDGREI 429
+V + ++
Sbjct: 185 RPSMVCEASQV 195
>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 881
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 160/528 (30%), Positives = 266/528 (50%), Gaps = 2/528 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LHA K + D T + +YA + + AR +F+ P + N++I YA
Sbjct: 292 QLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQD 351
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A +F++L ++ L D + + ACS L G++ +HG A+ GL + +
Sbjct: 352 QVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ-LHGLAVKCGLDFNICVA 410
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ ++ Y+K + EA +FD + D V N++I+ +++L LF MLR
Sbjct: 411 NTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTME 470
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD+YT ++ L+ G +HG +KS +V S ++ MY +C + A +
Sbjct: 471 PDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKI 530
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
L V+W+++I+G+S + AL YF ++ G D A+VL A A V
Sbjct: 531 HERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATV 590
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IHG +++ V ++S +VDMYSKCG + +FE +R+ +T++++I
Sbjct: 591 ELGKQIHGQILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAY 650
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG A + F ++ + + P+ + F ++L AC H G V+ G F M YG+ +
Sbjct: 651 AYHGLGEDAIKLFEEMQLQNVKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQ 710
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV LLG +G + EA I S+P D + LL C + GN ++AE A+ L
Sbjct: 711 MEHYSCMVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLL 770
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ DP+ + V+LSN YA G W +V K+R + + L+KE G SW+
Sbjct: 771 QLDPQDSSAYVLLSNVYAIAGMWGEVAKIRSFMKNYKLKKEPGCSWIQ 818
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 116/450 (25%), Positives = 212/450 (47%), Gaps = 5/450 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H L + D T LV +Y+ L A +F + P+R+ W+++I Y
Sbjct: 191 QVHCLAIQMGFDSDVVTGTALVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRND 250
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
RF + L+K +L + T+A R+C+ S +H A+ + G D+I +
Sbjct: 251 RFTEGLKLYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGT 310
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A + Y+K + +A KVF+ +P N++I G+A ++L++F + +
Sbjct: 311 ATLDMYAKCDRMVDARKVFNTFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDF 370
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
DE +L G ++ G +HG +K D V++ ++ MYA+C + A +F
Sbjct: 371 DEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIF 430
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + D V+W+A+I + Q + L F + + D SV+ A A +
Sbjct: 431 DDMEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALN 490
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G +HG VI+ G L V SA++DMY KCG L ++ E + ER +++NS+I G
Sbjct: 491 YGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFS 550
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
A +F +++ G+ PD T++ +L C + V G++I ++ + +Q +
Sbjct: 551 SEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILK---LQLHS 607
Query: 444 EHYI--YMVKLLGLAGNLEEAYSFIWSLPK 471
+ YI +V + GN++++ PK
Sbjct: 608 DVYIASTIVDMYSKCGNMQDSRIMFEKAPK 637
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/401 (26%), Positives = 195/401 (48%), Gaps = 2/401 (0%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD ++ YA + A+ LFD P+R V WNS++ Y + +F +
Sbjct: 102 RDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKM 161
Query: 96 LRTQLKPDNFTYACITRACSENSDLP-GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+++ D T+A + +AC+ D GL+ VH AI G D +T +ALV YS
Sbjct: 162 RLLEIQHDYATFAVVLKACTGIEDYGLGLQ-VHCLAIQMGFDSDVVTGTALVDMYSTCKK 220
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+D A +F + + + V +++I+G+ + + L+L+ ML G + T
Sbjct: 221 LDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASAFRS 280
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
S +G +H + LK++F + V + + MYA+C+ M A VFN+ +P +
Sbjct: 281 CAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFNTFPNPTRQSH 340
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ALI GY++Q +AL FR L D + ++ L A + G +HG ++
Sbjct: 341 NALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVK 400
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G + ++ V++ ++DMY+KCG L +F+ M ++ +++N++I + +
Sbjct: 401 CGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVEETLAL 460
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
F ++ + PD+ TF +++ AC +N G E+ R+ +
Sbjct: 461 FVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIK 501
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 147/352 (41%), Gaps = 32/352 (9%)
Query: 98 TQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
Q+ P T++ I + CS + + H V+G S+ L+ Y K ++
Sbjct: 31 NQMNPTKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLN 90
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFA-------------------------------HCGF 185
A VFD + D++ N+MI G+A GF
Sbjct: 91 YAFNVFDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGF 150
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
KS+++F M L D T ++ +G +H ++ FDS +
Sbjct: 151 HRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTA 210
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MY+ C ++ A+++F + + V WSA+I GY + + + L ++ + +G
Sbjct: 211 LVDMYSTCKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVS 270
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
AS + A + G +H Y ++ F +V +A +DMY+KC + +VF
Sbjct: 271 QATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDRMVDARKVFN 330
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
T ++N++I+G +A E FR + + L+ DE + S L AC
Sbjct: 331 TFPNPTRQSHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISLSGALTAC 382
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 144/316 (45%), Gaps = 10/316 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ ++L+ E+H V K+ + D F + ++ +Y +L A + ++ +R+
Sbjct: 479 VVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERT 538
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNSII ++ + +A S F +L+ + PDNFTYA + C+ + + + +HG
Sbjct: 539 TVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHG 598
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ L D +S +V YSK + ++ +F+ D V ++MI +A+ G +
Sbjct: 599 QILKLQLHSDVYIASTIVDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGED 658
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS---FDSYDYVSSV 245
+++LF+ M P+ + ++ V +G+H F S D S
Sbjct: 659 AIKLFEEMQLQNVKPNHTIFISVLRACAHMGF--VDKGLHYFREMRSHYGLDPQMEHYSC 716
Query: 246 LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDY---GKALYYFRKLNMQG 301
+V + R +N A + S+ F D V W L+ QG+ KA +L+ Q
Sbjct: 717 MVDLLGRSGQVNEALELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQD 776
Query: 302 KKADPVLIASVLAAAA 317
A VL+++V A A
Sbjct: 777 SSA-YVLLSNVYAIAG 791
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
PG H + GF +V VS+ L+ Y KC L VF+ M +R++I++N++I G
Sbjct: 56 PGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKMPQRDVISWNTMIFGYA 115
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
G EF + + + D +++++L G EIFT+M
Sbjct: 116 GVG----NMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFTKM 161
>gi|193848497|gb|ACF22688.1| vegetative storage protein [Brachypodium distachyon]
Length = 587
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 153/534 (28%), Positives = 277/534 (51%), Gaps = 3/534 (0%)
Query: 18 SLSRTKELHALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+L+ + LHAL ++ + D F A LV +YA + + ++ + + L S++
Sbjct: 4 ALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTSMV 63
Query: 77 RAYALAHRFNDAKSLF-KNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
Y +A F ++++ P T + A ++ D+ + H I +
Sbjct: 64 TGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRNNF 123
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D + +A++ Y ++ + A ++F+G+++ D+V + M++G+ G ++L +
Sbjct: 124 EYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTAYKK 183
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G P+ T+V ++ + G+ +H +K + V++ LV MY +C+C
Sbjct: 184 MVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMKCSC 243
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A +F + D V W+ +I+G++Q G +++ F+ + G D V + VLAA
Sbjct: 244 HEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKVLAA 303
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
++S + +HGY++ GF + V++ALVD+YSKCG LG ++VFE+ E++++ +
Sbjct: 304 CSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFESAMEKDVVLW 363
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+S+I G G+HG QA E F+ ++ + P+ TF ++L AC H GLV +G+ IF MT+
Sbjct: 364 SSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQEGKRIFESMTQ 423
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
YG+ H+ MV LLG AG L+EA + + D ALL+ C + +++++E
Sbjct: 424 VYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGRA-DAHTWCALLAACRAHHDTEMSE 482
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+VA +L + DP Y +L+N Y D W + R+ I D GL K G S V
Sbjct: 483 VVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPGCSAV 536
>gi|255641766|gb|ACU21153.1| unknown [Glycine max]
Length = 529
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/465 (32%), Positives = 245/465 (52%), Gaps = 10/465 (2%)
Query: 93 KNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL 152
+ LLR +L D+F Y + C ++ + H +V G +D ++ L+ YS
Sbjct: 9 QQLLRPKLHKDSFYYTELLNLCKTTDNV---KKAHAQVVVRGHEQDPFIAARLIDKYSHF 65
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
S +D A KVFD +S+PD+ CN +I +A+ + ++L++ D M G TP+ YT ++
Sbjct: 66 SNLDHARKVFDNLSEPDVFCCNVVIKVYANADPFGEALKVHDAMRWRGITPNYYTYPFVL 125
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
G+ IH +K D +V + LV+ YA+C + + VF+ + H D+V
Sbjct: 126 KACGAEGASKKGRVIHEHAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIV 185
Query: 273 TWSALITGYSQQGDYGKALYYF----RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
+W+++++GY+ G A+ F R ++ G D +VL A A++A++ G I
Sbjct: 186 SWNSMVSGYTVNGYVDDAILLFYDMLRDESVGG--PDHATFVTVLPAFAQAADIHAGYWI 243
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
H Y+++ L V + L+ +YS CGY+ + +F+ +S+R++I ++++I G HG
Sbjct: 244 HCYIVKTRMGLDSAVGTGLISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLA 303
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
+A FR ++ GL PD F LL AC H GL+ G +F M E YG+ HY
Sbjct: 304 QEALALFRQLVGAGLRPDGVVFLCLLSACSHAGLLEQGWHLFNAM-ETYGVAKSEAHYAC 362
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
+V LLG AG+LE+A FI S+P + GALL C I+ N +LAE+ A +LF DP
Sbjct: 363 IVDLLGRAGDLEKAVEFIQSMPIQPGKNIYGALLGACRIHKNMELAELAAEKLFVLDPDN 422
Query: 509 GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
V+L+ Y + RW D ++R + D ++K G S V S
Sbjct: 423 AGRYVILAQMYEDAERWLDAARVRKVVKDKEIKKPIGYSSVELES 467
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 173/363 (47%), Gaps = 2/363 (0%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
F EL ++ K+ HA V +DPF A +L+ Y+ + L AR +FD +
Sbjct: 21 FYYTELLNLCKTTDNVKKAHAQVVVRGHEQDPFIAARLIDKYSHFSNLDHARKVFDNLSE 80
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
VF N +I+ YA A F +A + + + P+ +TY + +AC R +
Sbjct: 81 PDVFCCNVVIKVYANADPFGEALKVHDAMRWRGITPNYYTYPFVLKACGAEGASKKGRVI 140
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H A+ G+ D +ALV Y+K ++ + KVFD + D+V NSM+SG+ G+
Sbjct: 141 HEHAVKCGMDLDLFVGNALVAFYAKCQDVEVSRKVFDEIPHRDIVSWNSMVSGYTVNGYV 200
Query: 187 DKSLQLFDWMLRLGKT--PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
D ++ LF MLR PD T V ++ + + + G IH + +K+ V +
Sbjct: 201 DDAILLFYDMLRDESVGGPDHATFVTVLPAFAQAADIHAGYWIHCYIVKTRMGLDSAVGT 260
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+S+Y+ C + A +F+ + ++ WSA+I Y G +AL FR+L G +
Sbjct: 261 GLISLYSNCGYVRMARAIFDRISDRSVIVWSAIIRCYGTHGLAQEALALFRQLVGAGLRP 320
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D V+ +L+A + + + G + + +G S + +VD+ + G L ++
Sbjct: 321 DGVVFLCLLSACSHAGLLEQGWHLFNAMETYGVAKSEAHYACIVDLLGRAGDLEKAVEFI 380
Query: 365 ETM 367
++M
Sbjct: 381 QSM 383
>gi|357143265|ref|XP_003572861.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g01580-like [Brachypodium distachyon]
Length = 697
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 155/544 (28%), Positives = 281/544 (51%), Gaps = 3/544 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L+ +L+ + LHAL ++ + D F A LV +YA + + ++ +
Sbjct: 104 LLLKACAMLPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSE 163
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLF-KNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ L S++ Y +A F ++++ P T + A ++ D+ +
Sbjct: 164 PDMVLRTSMVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQA 223
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
H I + D + +A++ Y ++ + A ++F+G+++ D+V + M++G+ G
Sbjct: 224 CHAFVIRNNFEYDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGD 283
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
++L + M+ G P+ T+V ++ + G+ +H +K + V++
Sbjct: 284 ICEALTAYKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATA 343
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
LV MY +C+C A +F + D V W+ +I+G++Q G +++ F+ + G D
Sbjct: 344 LVDMYMKCSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPD 403
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V + VLAA ++S + +HGY++ GF + V++ALVD+YSKCG LG ++VFE
Sbjct: 404 AVTMVKVLAACSESGVMRQAFCLHGYLVITGFCDKIFVAAALVDLYSKCGNLGCAVRVFE 463
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ E++++ ++S+I G G+HG QA E F+ ++ + P+ TF ++L AC H GLV +
Sbjct: 464 SAMEKDVVLWSSMISGYGVHGLGQQAVELFQMMVASSVKPNSLTFVSVLSACSHSGLVQE 523
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G+ IF MT+ YG+ H+ MV LLG AG L+EA + + D ALL+ C
Sbjct: 524 GKRIFESMTQVYGVVPNAVHHSAMVDLLGRAGELQEAAKLLHGNGR-ADAHTWCALLAAC 582
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
+ +++++E+VA +L + DP Y +L+N Y D W + R+ I D GL K G
Sbjct: 583 RAHHDTEMSEVVAAKLLKLDPDHAGYYNLLNNIYTFDENWSSAKENRNIIRDRGLNKVPG 642
Query: 546 VSWV 549
S V
Sbjct: 643 CSAV 646
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 199/373 (53%), Gaps = 7/373 (1%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
AR LFD+ P + L N+++RA+ A ++ DA L L +++PD FT + + +AC+
Sbjct: 55 ARHLFDEIPVPTPRLANALLRAHVRARQWCDALLLIPCL---RVRPDAFTLSLLLKACAM 111
Query: 117 NSDLPGLRFVHGGAIVSGLG-RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
L R +H AI S D+ ++ALV Y+K + +I ++ S+PD+VL S
Sbjct: 112 LPALAHGRALHALAIRSCTAYTDAFVAAALVHMYAKCRGMVGSINAYNAFSEPDMVLRTS 171
Query: 176 MISGFAHCGFWDKSLQLFD-WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
M++G+ ++L+ F ++ G P TLV +IS + + GQ H F +++
Sbjct: 172 MVTGYEQNRMAAEALEFFSRHVVGQGFMPSPVTLVSVISAAAQLKDVLNGQACHAFVIRN 231
Query: 235 SFDSYDYV-SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+F+ YD V + ++ Y R + +A +F + D+VTWS ++TGY Q GD +AL
Sbjct: 232 NFE-YDLVLVNAILGFYMRIGAVQAARRLFEGMTEKDVVTWSCMVTGYVQSGDICEALTA 290
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
++K+ G K + V + SV+ A + + ++ G +H ++ G EL + V++ALVDMY K
Sbjct: 291 YKKMVEAGIKPNAVTVVSVVQACSLAPDIEEGRRVHDIAVKIGCELEMTVATALVDMYMK 350
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
C +Q+F MS+++ + + VI G +G ++ F+ ++ G PD T +
Sbjct: 351 CSCHEEAMQLFCRMSKKDAVAWAVVISGFTQNGLPDESMRVFKCMLFGGPFPDAVTMVKV 410
Query: 414 LCACCHGGLVNDG 426
L AC G++
Sbjct: 411 LAACSESGVMRQA 423
>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
Length = 1033
Score = 266 bits (679), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/528 (29%), Positives = 261/528 (49%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K+ L+ F ++ LV +Y +F+ R+V W ++I A
Sbjct: 173 LHGFSVKSGLINSVFVSSALVDMYMKVGKTEQGCSVFENMTTRNVVSWTAVIVGLVHAGC 232
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
D S F + R+++ D+ T+A +A +E+ L + +H I G + +
Sbjct: 233 SLDGLSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNT 292
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L T YSK D +++F +S PD+V ++I + G +++L F M + +P+
Sbjct: 293 LGTMYSKCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPN 352
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
EYT +IS ++ G+ IHG L+ VS+ ++++Y++C + A VF+
Sbjct: 353 EYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFD 412
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+++WS +I+ Y Q +A Y ++ +G K + +ASVL+ A + P
Sbjct: 413 GMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEP 472
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H Y + G + MV SAL+ MYS+ G L ++F+++ +I+++ ++I G
Sbjct: 473 GKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAE 532
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG++ +A F +I GL PD TF +L AC H GLV+ G + MT EY I E
Sbjct: 533 HGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKE 592
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY ++ LL AG L EA + ++P P D V LL C +G+ D A A Q+
Sbjct: 593 HYGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRL 652
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
P + L+N Y+ GR ++ +R + G+ KE G SW++ +
Sbjct: 653 HPNSAGAHITLANIYSASGRREEAAHVRKLMKSKGVIKEPGWSWINSN 700
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/426 (27%), Positives = 209/426 (49%), Gaps = 3/426 (0%)
Query: 38 PFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-L 96
P ++L +L L + AR +F+K R W ++I Y A N+A LF N+ +
Sbjct: 85 PELNSQLKQLMKLGKIC-EARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSNMWV 143
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ L+ D F + +AC+ ++ +HG ++ SGL SSALV Y K+ +
Sbjct: 144 DSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTE 203
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+ VF+ ++ ++V ++I G H G L F M R D +T +
Sbjct: 204 QGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVALKASA 263
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
E LL G+ IH +K F+ YV + L +MY++C + +F + PD+V+W+
Sbjct: 264 ESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCRKPDYVMRLFGKMSTPDVVSWTN 323
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
LI Y Q GD +AL F+++ + ASV++A A A G IHG+ ++ G
Sbjct: 324 LIMTYVQMGDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLG 383
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
++ VS++++ +YSKCG L VF+ M+ ++II+++++I +AF +
Sbjct: 384 LVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSHAKEAFNYLS 443
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+ +G P+E +++L C L+ G+++ G+ +T + ++ + +
Sbjct: 444 WMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYAL-CIGLDHETMVHSALISMYSRS 502
Query: 457 GNLEEA 462
GNL+EA
Sbjct: 503 GNLQEA 508
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 134/281 (47%), Gaps = 10/281 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H + L+ + ++ LY+ +L A ++FD ++ + W++II Y
Sbjct: 373 EQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQG 432
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A + + R KP+ F A + C + L + VH A+ GL +++
Sbjct: 433 SHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVH 492
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL++ YS+ + EA K+FD + + D+V +MI+G+A G+ +++ LF+ + +G
Sbjct: 493 SALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLM 552
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS-----VLVSMYARCNCMN 257
PD T +G+++ L+ +G + K + Y S ++ + R ++
Sbjct: 553 PDYVTFIGILTACNHAGLVDLG----FYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLS 608
Query: 258 SAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKL 297
A H+ ++ P D V WS L+ GD +A++ ++
Sbjct: 609 EAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQM 649
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + S L K++HA L + + L+ +Y+ + L A +FD
Sbjct: 460 VLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNND 519
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ W ++I YA +A SLF+N+ L PD T+ I AC+
Sbjct: 520 IVSWTAMINGYAEHGYSQEAISLFENISSVGLMPDYVTFIGILTACN 566
>gi|449449950|ref|XP_004142727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g47840-like [Cucumis sativus]
Length = 712
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 263/525 (50%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K L+ F + L+ +Y + + +FD+ P R+ W ++I A
Sbjct: 138 LHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ F + R++++ D++ YA +A +++ L R +H + G +S +++
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L T Y+K +D + F + D+V ++++ + G D LQ F M P+
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
EYT +IS + L G+ +H L F + V++ ++++Y++C + S VF
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S+ D++TWS +I YSQ G +A Y ++ +G K + +ASVL+ A +
Sbjct: 378 SMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H +V+ G E + MV SAL+ MY+KCG + ++F + +II++ ++I G
Sbjct: 438 GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE 497
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG + +A E F +I + GL PD TF +L AC H G+V+ G F M+++Y I E
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKE 557
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY M+ LL AG L +A + I S+P D V LL C I+G+ D + A ++ +
Sbjct: 558 HYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKL 617
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP + L+N +A G+W + +R + G+ KE G S V
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSV 662
Score = 171 bits (433), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 192/390 (49%), Gaps = 1/390 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQ 99
A +++ N L AR LFD+ PQR W +II Y + ++A LF + L+++
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L+ D F + + C + +HG ++ +GL SAL+ Y K+ I +
Sbjct: 112 LRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSC 171
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
KVFD + + V ++I+G G+ + L F M R D Y + +
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
L+ G+ IH LK FD +V++ L +MY +C ++ H F + D+V+W+ ++T
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
Y Q G L F+++ + ++V++ A A + G +H +V+ GF
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
++ V+++++ +YSKCG L +VF +M R+IIT++++I G+ +AFE+ +
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G P+E +++L C ++ G+++
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQL 441
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 142/315 (45%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+ L+ S +L+ + +H K + F A L +Y L F K
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL 281
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V W +I+ AY + + FK + + + P+ +T++ + C+ + L +H
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ G +++++T YSK + KVF + D++ +++I+ ++ G+ +
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++ + M G P+E+ L ++S ++L G+ +H L + V S L+
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALI 461
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MYA+C + A +F + D+++W+A+I+GY++ G +A+ F + G + D V
Sbjct: 462 IMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSV 521
Query: 308 LIASVLAAAAKSANV 322
VL A + + V
Sbjct: 522 TFIGVLTACSHAGMV 536
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KAD 305
+ + + N + A +F+ L D V+W+ +I+GY D +AL F K+ +Q + + D
Sbjct: 56 LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
P L++ L N G +HG+ ++ G SV V SAL+DMY K G +G +VF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKTGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M RN +T+ +VI GL G++ +F + + D ++ L A G +N
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235
Query: 426 GREIFTR 432
GR I T+
Sbjct: 236 GRSIHTQ 242
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 10/270 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHA V + A ++ LY+ L S +F R + W++II AY+
Sbjct: 338 EQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQV 397
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A + KP+ F A + C + L + +H + GL + S+
Sbjct: 398 GYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVC 457
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL+ Y+K I EA K+F D++ +MISG+A G ++++LF+ + ++G
Sbjct: 458 SALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS-----VLVSMYARCNCMN 257
PD T +G+++ ++ +G + S Y S ++ + R ++
Sbjct: 518 PDSVTFIGVLTACSHAGMVDLG----FYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLH 573
Query: 258 SAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
A + S+ D V WS L+ GD
Sbjct: 574 DAETLIRSMPIQWDDVVWSTLLRACRIHGD 603
>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g21065-like [Vitis vinifera]
Length = 613
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 148/444 (33%), Positives = 248/444 (55%), Gaps = 2/444 (0%)
Query: 109 CITRACSENSDLPGLRFVHGGAIVSG--LGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
CI S S R +H +I G L + + T S S + A ++F +
Sbjct: 42 CIALLLSCASSKFKFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQ 101
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+P++ N+MI G+A +L+L+ M PD +T L+ + + + G+
Sbjct: 102 NPNIFTWNTMIRGYAESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEK 161
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H +++ F+S +V + LV MYA C SA+ +F + +LVTW+++I GY+ G
Sbjct: 162 VHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGR 221
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+AL FR++ ++G + D + S+L+A A+ + G H Y+++ G + ++ +A
Sbjct: 222 PNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNA 281
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+D+Y+KCG + +VF+ M E++++++ S+I+GL ++GF +A E F+++ KGL P
Sbjct: 282 LLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPS 341
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
E TF +L AC H G+V++G + F RM EEYGI K EHY MV LLG AG +++A+ FI
Sbjct: 342 EITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFI 401
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
++P + V LL C I+G+ L E+ QL + +P+ V+LSN YA + RW
Sbjct: 402 QNMPMQPNAVVWRTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWS 461
Query: 527 DVMKLRDDIVDNGLRKEAGVSWVS 550
DV K+R ++ G++K G S V
Sbjct: 462 DVHKVRRTMLREGVKKTPGHSLVE 485
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 185/408 (45%), Gaps = 46/408 (11%)
Query: 23 KELHALVAKASL-LRDPFYATKLV-RLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
+++HA + + L +P L+ L + + + A +F + ++F WN++IR YA
Sbjct: 57 RQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYA 116
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+ A L++ + + ++PD TY + +A ++ D+ VH AI +G
Sbjct: 117 ESENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVF 176
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
+ LV Y+ + A K+F+ +++ +LV NS+I+G+A G +++L LF M G
Sbjct: 177 VQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRG 236
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD +T+V L+S E L++G+ H + +K D + + L+ +YA+C + A+
Sbjct: 237 VEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAH 296
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF+ + +V+W++LI G + G +AL F++L +G + VL A
Sbjct: 297 KVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYAC---- 352
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-----NIITY 375
S CG + G F+ M E I Y
Sbjct: 353 -------------------------------SHCGMVDEGFDYFKRMKEEYGIVPKIEHY 381
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC-HGGL 422
++ LG G QA EF +++ + P+ + LL AC HG L
Sbjct: 382 GCMVDLLGRAGLVKQAHEFIQNM---PMQPNAVVWRTLLGACTIHGHL 426
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L+ + H + K L + L+ LYA + A +FD+ ++SV W S+I
Sbjct: 256 ALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQAHKVFDEMEEKSVVSWTSLIV 315
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A+ +A LFK L R L P T+ + ACS
Sbjct: 316 GLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353
>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g24000, mitochondrial-like [Cucumis sativus]
Length = 677
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 248/451 (54%), Gaps = 2/451 (0%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L+P+ Y+ + C+ L R +H S D + + ++ Y+K ++EA
Sbjct: 101 LEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQ 160
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
+FD + D+V +ISG++ G ++L LF ML LG P+E+TL L+
Sbjct: 161 DLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGP 220
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
G+ +H F LK +D +V S L+ MYAR M A +FNSL ++V+W+ALI
Sbjct: 221 SDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIA 280
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G++++G+ + F ++ QG + +SVLA A+ S ++ G +H +VI+ G +
Sbjct: 281 GHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACAS-SGSLEQGKWVHAHVIKSGGQP 339
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ + L+DMY+K G + +VF + +++I+++NS+I G HG +A + F ++
Sbjct: 340 IAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQML 399
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
+ + P+E TF ++L AC H GL+++G+ F M +++ I+A+ H++ +V LLG AG L
Sbjct: 400 KAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEAQVAHHVTVVDLLGRAGRL 458
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
EA FI +P AV GALL C ++ N DL A Q+FE DP V+LSN Y
Sbjct: 459 NEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGPHVLLSNIY 518
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A GR D K+R + ++G++KE SWV
Sbjct: 519 ASAGRLSDAAKVRKMMKESGVKKEPACSWVE 549
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 201/436 (46%), Gaps = 22/436 (5%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L + + +HA + ++ D ++ +YA L A+ LFDK P + + W +I
Sbjct: 119 RKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSLEEAQDLFDKMPTKDMVSWTVLI 178
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ + + ++A +LF +L +P+ FT + + +A R +H ++ G
Sbjct: 179 SGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYD 238
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+ S+L+ Y++ + + EA +F+ ++ ++V N++I+G A G + ++LF M
Sbjct: 239 MNVHVGSSLLDMYARWAHMREAKVIFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQM 298
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
LR G P +T +++ S L G+ +H +KS Y+ + L+ MYA+ +
Sbjct: 299 LRQGFEPTHFTYSSVLACASSGS-LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSI 357
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF L D+V+W+++I+GY+Q G +AL F ++ + + + SVL A
Sbjct: 358 KDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTAC 417
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
+ S + G + +H E V +VD+ + G L + E M +
Sbjct: 418 SHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVW 477
Query: 377 SVILG---------LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDG 426
+LG LG+ Y A + F L+P +S LL G ++D
Sbjct: 478 GALLGACRMHKNMDLGV----YAAEQIFE------LDPHDSGPHVLLSNIYASAGRLSDA 527
Query: 427 REIFTRMTEEYGIQAK 442
++ +M +E G++ +
Sbjct: 528 AKV-RKMMKESGVKKE 542
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 4/313 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S + S ++LHA K + + L+ +YA + A+++F+ ++
Sbjct: 212 LLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKVIFNSLAAKN 271
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V WN++I +A LF +LR +P +FTY+ + AC+ + L ++VH
Sbjct: 272 VVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHA 330
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I SG + + L+ Y+K I +A KVF + D+V NS+ISG+A G +
Sbjct: 331 HVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISGYAQHGLGAE 390
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+LQLF+ ML+ P+E T + +++ LL GQ K ++ +V
Sbjct: 391 ALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELMKKHKIEAQVAHHVTVVD 450
Query: 249 MYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGKKADP 306
+ R +N A + P W AL+ + +Y ++ + + P
Sbjct: 451 LLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFELDPHDSGP 510
Query: 307 -VLIASVLAAAAK 318
VL++++ A+A +
Sbjct: 511 HVLLSNIYASAGR 523
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 67/139 (48%)
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
LY +N + + L + +L + G IH ++ FE +++ + +++M
Sbjct: 90 LYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNM 149
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
Y+KCG L +F+ M ++++++ +I G G +A F ++ G P+E T
Sbjct: 150 YAKCGSLEEAQDLFDKMPTKDMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTL 209
Query: 411 SALLCACCHGGLVNDGREI 429
S+LL A G + GR++
Sbjct: 210 SSLLKASGTGPSDHHGRQL 228
>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 173/624 (27%), Positives = 294/624 (47%), Gaps = 97/624 (15%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA-- 80
+ +H + K L + L+ YA L A +FD+ P +S F WN++I YA
Sbjct: 30 RSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQ 89
Query: 81 ----LAHR-------------------------FNDAKSLFKNLLRTQLKPDNFTYACIT 111
++ R F++A +F ++ ++ P FT + +
Sbjct: 90 GNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149
Query: 112 RACSENSDLPGLRFVHGGAIVSGLG-------------------------------RDSI 140
+C+ N L R +H + GLG ++
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIS 209
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
T +AL++ Y + + A F+ + D D+V NSMISG++ G+ ++L +F ML
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEP 269
Query: 201 K-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA-------- 251
PD +TL ++S L++G+ IH + L++ ++ V + L+SMYA
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329
Query: 252 -------RCNCMN------------------SAYHVFNSLFHPDLVTWSALITGYSQQGD 286
R + +N A +FN L D+V W+A+I GY Q G
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ AL FR + +G + + +A++L+ ++ + G IH I+ G + V++A
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449
Query: 347 LVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
L+ MY+K G + + +VF+ + ++ I+++ S+I+ L HG +A F ++ G+ P
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509
Query: 406 DESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
D T+ +L AC H GLV GR+ + MTE + I+ HY M+ L G AG L+EAY F
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569
Query: 466 IWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRW 525
I S+P D G+LL+ C I+ N+DLA++ A +L DP + L+N Y+ G+W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 526 DDVMKLRDDIVDNGLRKEAGVSWV 549
++ + R + D G+RKE G+SW+
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWI 653
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 195/445 (43%), Gaps = 68/445 (15%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL ++Q+L +++H+ V K L AT L+ +YA A+++FD+ ++
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 69 VFLWNSIIRAYALAHRFNDAKSLF--------------------------------KNLL 96
+ WN++I Y + +F A S F K L
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVH--------------GGAIVSGLGRDS--- 139
LKPDNFT A I AC+ L + +H G A++S +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 140 ----------------ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
I ++L+ Y+KL + A ++F+ + D D+V +MI G+
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G W+ +L+LF M+ G P+ YTL ++S ++L G+ IH +K+ S V+
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 244 SVLVSMYARCNCMNSAYHVFN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++MYA+ +N A VF+ ++V+W+++I +Q G +A+ F ++ G
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGI 361
K D + VL+A V G + + + H E ++ + ++D+Y + G L
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567
Query: 362 QVFETMS-ERNIITYNSVILGLGLH 385
E+M E + I + S++ +H
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIH 592
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 166/384 (43%), Gaps = 76/384 (19%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +H +K Y+ + L++ YA+ + A+HVF+ + +W+ LI+GY++
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 284 QGD-------------------------------YGKALYYFRKLNMQGKKADPVLIASV 312
QG+ + A++ F K+ + +++V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC------------------ 354
L++ A + + G IH +V++ G V V+++L++MY+KC
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208
Query: 355 -------------GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII-E 400
G L FE M +R+I+++NS+I G G+ +A F ++ E
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNE 268
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY----IYMVKLLGLA 456
L PD T +++L AC + +N G++I Y ++A+TE ++ + +
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHA-----YILRAETETSGAVGNALISMYAKS 323
Query: 457 GNLEEAYSFI-WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
G +E A + + ++ +LL GN A + ++L + D A+ M+
Sbjct: 324 GGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV--AWTAMI 381
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNG 539
Y ++G W+D ++L +V+ G
Sbjct: 382 VG-YVQNGLWNDALELFRLMVNEG 404
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
A +L + + + + G +H +I+ G L V + + L+ Y+K G L VF+ M
Sbjct: 14 AHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPL 73
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ ++N++I G G FE R ++ + + D +++A++ GL ++ +
Sbjct: 74 KSTFSWNTLISGYAKQG----NFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWM 129
Query: 430 FTRMTEE 436
F +M E
Sbjct: 130 FAKMISE 136
>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
Length = 673
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 158/519 (30%), Positives = 260/519 (50%), Gaps = 11/519 (2%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA V K + F + LV +YA V+ +AR +FD P+R+V +W +++ Y +
Sbjct: 2 VHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNSQ 61
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
A +F ++L + P NFT + ACS + + H I + DS +A
Sbjct: 62 PEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSIGNA 121
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L + YSK +D ++K F + D++ ++IS G L+LF ML P+
Sbjct: 122 LCSLYSKFGSLDSSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPN 181
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++TL ++S +G +H K +S +++ LV +Y +C C++ A ++FN
Sbjct: 182 DFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCIDEAKNLFN 241
Query: 265 SLFHPDLVTWSALITGYSQQGDYGK-----------ALYYFRKLNMQGKKADPVLIASVL 313
+ + +L+TW+A+I G++Q D K AL + KLN G+K D ++S+L
Sbjct: 242 RMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSIL 301
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
++ A + G IH I+ GF V+V +ALVDMY KCG + + F MS R +I
Sbjct: 302 TVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLI 361
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++ S+I HG + A + F D+ G P++ TF +L AC H G+V++ E F M
Sbjct: 362 SWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEALEYFEIM 421
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+EY I+ +HY +V + G L+EA+ I + + + L++ C +GN +L
Sbjct: 422 QKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHGNEEL 481
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
A QL + PR V+L N Y RW+DV +R
Sbjct: 482 GFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVR 520
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 190/398 (47%), Gaps = 25/398 (6%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+ L S +S++ K+ HA + K + D L LY+ L S+ F +T ++
Sbjct: 86 IALNACSSLESITLGKQFHAFIIKYRISHDSSIGNALCSLYSKFGSLDSSVKAFRETGEK 145
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS--ENSDLPGLRF 125
V W +II A R LF +L ++P++FT + CS ++SDL G++
Sbjct: 146 DVISWTTIISACGDNGRAGMGLRLFIEMLFENVEPNDFTLTSVLSLCSTIQSSDL-GMQ- 203
Query: 126 VHGGAIVSGLGRDS---ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VH ++ + LG +S IT+S LV Y K IDEA +F+ + +L+ N+MI+G A
Sbjct: 204 VH--SLSTKLGHESNLRITNS-LVYLYLKCGCIDEAKNLFNRMEYKNLITWNAMIAGHAQ 260
Query: 183 CGFWDK-----------SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
K +L ++ + R G+ PD +TL +++ + L G+ IH
Sbjct: 261 AMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDLFTLSSILTVCSRLAALEQGEQIHAQT 320
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
+KS F S V + LV MY +C + A F + L++W+++IT +++ G AL
Sbjct: 321 IKSGFLSDVVVGTALVDMYDKCGSIERARKAFLDMSTRTLISWTSMITSFARHGQSQHAL 380
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS--SALVD 349
F + + G + + + VLAA + + V A+ + ++Q +++ ++ LVD
Sbjct: 381 QLFEDMRLAGFRPNQITFVGVLAACSHAGMV-DEALEYFEIMQKEYKIKPVMDHYGCLVD 439
Query: 350 MYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHG 386
M+ + G L V + M E N + +I G HG
Sbjct: 440 MFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCRNHG 477
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
++H +VI+ G V S LV++Y+KCG + +VF+ + RN++ + +++ G +
Sbjct: 1 MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLPRRNVVVWTTLMTGYVQNS 60
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
A E F D++E G P T S L AC
Sbjct: 61 QPEVAVEVFGDMLESGSFPSNFTLSIALNAC 91
>gi|297746342|emb|CBI16398.3| unnamed protein product [Vitis vinifera]
Length = 608
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 271/537 (50%), Gaps = 46/537 (8%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTPQ 66
L L + +S+S+ K++ + + L+ D F +++L+ A++ ++ ILF+ T
Sbjct: 54 LSLLEKCKSISQLKQIQSQMVLTGLIEDGFASSRLIAFCAISEWRDLDYCTNILFN-TRN 112
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRF 125
+ F WN IR + + +A L+K +L+ KPDN+TY + +AC+ S +
Sbjct: 113 PNTFSWNVAIRGFLDSENPREAVVLYKRVLQCDGTKPDNYTYPLLFKACARLSLIRMGSE 172
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+ G + G D S+A++ +D A K+FD DLV NSMI+G+ CG
Sbjct: 173 ILGHVLHLGFDSDIFVSNAVIHLLVSCGDLDGARKMFDKSCVRDLVSWNSMINGY--CGN 230
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ + +LFD M KT +T
Sbjct: 231 LESARKLFDSMT--NKTMVSWT-------------------------------------T 251
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
+V YA+ ++ A+ +F+ + D+V W+A+I GY +AL F ++ D
Sbjct: 252 MVVGYAQSGLLDMAWKLFDEMPDKDVVPWNAMIGGYVHANRGKEALALFNEMQAMNINPD 311
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V + S L+A ++ + G IH Y+ +H L+V + +AL+DMY+KCG + IQVF+
Sbjct: 312 EVTMVSCLSACSQLGALDVGIWIHHYIEKHELSLNVALGTALIDMYAKCGKITKAIQVFQ 371
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ RN +T+ ++I GL LHG + A +F ++I+ + PDE TF LL ACCHGGLV +
Sbjct: 372 ELPGRNSLTWTAIISGLALHGNAHGAIAYFSEMIDNSVMPDEVTFLGLLSACCHGGLVEE 431
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR+ F++M+ ++ + K +HY MV LLG AG LEEA I S+P D V GAL C
Sbjct: 432 GRKYFSQMSSKFNLSPKLKHYSCMVDLLGRAGLLEEAEELIKSMPIEADAVVWGALFFAC 491
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
I+GN + E A +L + DP V+L+N Y E W + K R + G+ K
Sbjct: 492 RIHGNVLMGERAASKLLQMDPHDSGIYVLLANMYGEAEMWKEAGKARKLMRQRGVEK 548
>gi|449502685|ref|XP_004161713.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At3g47840-like [Cucumis
sativus]
Length = 712
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 154/525 (29%), Positives = 263/525 (50%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH K L+ F + L+ +Y + + +FD+ P R+ W ++I A
Sbjct: 138 LHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFDEMPTRNAVTWTAVITGLVRAGY 197
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ F + R++++ D++ YA +A +++ L R +H + G +S +++
Sbjct: 198 SEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNHGRSIHTQTLKKGFDENSFVANS 257
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L T Y+K +D + F + D+V ++++ + G D LQ F M P+
Sbjct: 258 LTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPN 317
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
EYT +IS + L G+ +H L F + V++ ++++Y++C + S VF
Sbjct: 318 EYTFSAVISCCANFARLKWGEQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFC 377
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S+ D++TWS +I YSQ G +A Y ++ +G K + +ASVL+ A +
Sbjct: 378 SMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQ 437
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H +V+ G E + MV SAL+ MY+KCG + ++F + +II++ ++I G
Sbjct: 438 GKQLHAHVLSVGLEQTSMVCSALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAE 497
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG + +A E F +I + GL PD TF +L AC H G+V+ G F M+++Y I E
Sbjct: 498 HGHSQEAIELFENIQKVGLRPDSVTFIGVLTACSHAGMVDLGFYYFNSMSKDYHITPSKE 557
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY M+ LL AG L +A + I S+P D V LL C I+G+ D + A ++ +
Sbjct: 558 HYGCMIDLLCRAGRLHDAETLIRSMPIQWDDVVWSTLLRACRIHGDVDCGQRAAAEVLKL 617
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
DP + L+N +A G+W + +R + G+ KE G S V
Sbjct: 618 DPNCAGTHITLANIFAAKGKWKEAANIRMLMKSKGVVKEPGWSSV 662
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 191/390 (48%), Gaps = 1/390 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL-LRTQ 99
A +++ N L AR LFD+ PQR W +II Y + ++A LF + L+++
Sbjct: 52 ANNQLKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSE 111
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
L+ D F + + C + +HG ++ GL SAL+ Y K+ I +
Sbjct: 112 LRIDPFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSC 171
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
KVFD + + V ++I+G G+ + L F M R D Y + +
Sbjct: 172 KVFDEMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSG 231
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
L+ G+ IH LK FD +V++ L +MY +C ++ H F + D+V+W+ ++T
Sbjct: 232 ALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTLDVVSWTTIVT 291
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
Y Q G L F+++ + ++V++ A A + G +H +V+ GF
Sbjct: 292 AYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLHAHVLCVGFVN 351
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
++ V+++++ +YSKCG L +VF +M R+IIT++++I G+ +AFE+ +
Sbjct: 352 ALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGEEAFEYLSRMR 411
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G P+E +++L C ++ G+++
Sbjct: 412 SEGPKPNEFALASVLSVCGSMAILEQGKQL 441
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 142/315 (45%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+ L+ S +L+ + +H K + F A L +Y L F K
Sbjct: 222 IALKASADSGALNHGRSIHTQTLKKGFDENSFVANSLTTMYNKCGKLDYGLHTFRKMRTL 281
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
V W +I+ AY + + FK + + + P+ +T++ + C+ + L +H
Sbjct: 282 DVVSWTTIVTAYIQMGKEDCGLQAFKRMRASNVIPNEYTFSAVISCCANFARLKWGEQLH 341
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ G +++++T YSK + KVF + D++ +++I+ ++ G+ +
Sbjct: 342 AHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQVGYGE 401
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
++ + M G P+E+ L ++S ++L G+ +H L + V S L+
Sbjct: 402 EAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVCSALI 461
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MYA+C + A +F + D+++W+A+I+GY++ G +A+ F + G + D V
Sbjct: 462 IMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLRPDSV 521
Query: 308 LIASVLAAAAKSANV 322
VL A + + V
Sbjct: 522 TFIGVLTACSHAGMV 536
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KAD 305
+ + + N + A +F+ L D V+W+ +I+GY D +AL F K+ +Q + + D
Sbjct: 56 LKILVKTNHLKDARDLFDQLPQRDEVSWTNIISGYVNSSDSSEALRLFSKMRLQSELRID 115
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
P L++ L N G +HG+ ++ G SV V SAL+DMY K G +G +VF+
Sbjct: 116 PFLLSLGLKTCGLGLNYLYGTNLHGFSVKXGLVNSVFVGSALLDMYMKIGEIGRSCKVFD 175
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
M RN +T+ +VI GL G++ +F + + D ++ L A G +N
Sbjct: 176 EMPTRNAVTWTAVITGLVRAGYSEAGLAYFSGMGRSKVEYDSYAYAIALKASADSGALNH 235
Query: 426 GREIFTR 432
GR I T+
Sbjct: 236 GRSIHTQ 242
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 10/270 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LHA V + A ++ LY+ L S +F R + W++II AY+
Sbjct: 338 EQLHAHVLCVGFVNALSVANSIMTLYSKCGELASVSKVFCSMKFRDIITWSTIIAAYSQV 397
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A + KP+ F A + C + L + +H + GL + S+
Sbjct: 398 GYGEEAFEYLSRMRSEGPKPNEFALASVLSVCGSMAILEQGKQLHAHVLSVGLEQTSMVC 457
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
SAL+ Y+K I EA K+F D++ +MISG+A G ++++LF+ + ++G
Sbjct: 458 SALIIMYAKCGSIAEASKIFMDSWKDDIISWTAMISGYAEHGHSQEAIELFENIQKVGLR 517
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS-----VLVSMYARCNCMN 257
PD T +G+++ ++ +G + S Y S ++ + R ++
Sbjct: 518 PDSVTFIGVLTACSHAGMVDLG----FYYFNSMSKDYHITPSKEHYGCMIDLLCRAGRLH 573
Query: 258 SAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
A + S+ D V WS L+ GD
Sbjct: 574 DAETLIRSMPIQWDDVVWSTLLRACRIHGD 603
>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
Length = 724
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 145/455 (31%), Positives = 244/455 (53%), Gaps = 2/455 (0%)
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGRDSITSSALVTAYSKLSLI 155
R L PD Y+ + + C+ + R VH + S L + + +V Y+K +
Sbjct: 80 RGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYAKCGCL 139
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
D+A ++FD + D+V ++I+GF+ +L LF MLRLG P+ +TL L+
Sbjct: 140 DDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLSSLLKAS 199
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
L G +H FCLK + S YV S LV MYARC M++A F+ + V+W+
Sbjct: 200 GSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDGMPTKSEVSWN 259
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
ALI+G++++G+ AL+ K+ + + +SV +A A + G +H ++I+
Sbjct: 260 ALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQGKWVHAHMIKS 319
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G +L + + L+DMY+K G + +VF+ + + +++++N+++ G HG + + F
Sbjct: 320 GLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQHGLGKETLDRF 379
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
++ G+ P+E +F +L AC H GL+++G F M ++Y ++ HY+ V LLG
Sbjct: 380 EQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPHYVTFVDLLGR 438
Query: 456 AGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
G L+ A FI +P AV GALL C ++ N +L A + FE DP +++L
Sbjct: 439 VGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELDPHDSGPRMLL 498
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
SN YA GRW DV K+R + ++G++K+ SWV
Sbjct: 499 SNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVE 533
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 84/180 (46%), Gaps = 2/180 (1%)
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVM 342
Q D G LY + D L + +L + V G ++H +++ H + ++
Sbjct: 65 QSDGGTGLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLV 124
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+ + +V+MY+KCG L ++F+ M ++++T+ ++I G + A F ++ G
Sbjct: 125 LQNIIVNMYAKCGCLDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLG 184
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
L P+ T S+LL A ++ G ++ +YG Q+ +V + G+++ A
Sbjct: 185 LQPNHFTLSSLLKASGSEHGLDPGTQLHA-FCLKYGYQSSVYVGSALVDMYARCGHMDAA 243
>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 648
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 239/452 (52%), Gaps = 1/452 (0%)
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
T L P YA + ++C + + +H ++G G D++ ++ LV Y +
Sbjct: 69 TCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSS 128
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +FD + ++ L N +I G+A G ++ ++QL+ M G PD +T ++
Sbjct: 129 ARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAA 188
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
S + G+ IH +++ ++ +V + L+ MYA+C C+ SA VF+ + D V W+++
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSM 248
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
+ YSQ G L ++ + G + + + ++A+A +A + G +HG + F
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEF 308
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
E V +ALVDMY+KCG + + +FE + + ++++N++I G +HG +A + F +
Sbjct: 309 ESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEE 368
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+ + PD TF +L AC HGGL+ +G F M +Y I +HY MV LLG +G
Sbjct: 369 -MNRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSG 427
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
L+EAY+ I + D V GALL+ C I+ N +L EI +L E +P V+LSN
Sbjct: 428 RLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSN 487
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA+ G+W+ V KLR + D L+K SW+
Sbjct: 488 IYAQAGKWEGVAKLRKLMTDRRLKKSIACSWI 519
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 135/457 (29%), Positives = 217/457 (47%), Gaps = 46/457 (10%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + +++ K+LHA V A D ATKLV LY + + L SAR+LFD+ P+ +
Sbjct: 81 LLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLLFDRIPKHN 140
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+FLWN +IR YA + A L+ + L PDNFT+ + +AC+ S + R +H
Sbjct: 141 IFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHE 200
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ +G +D +AL+ Y+K + A +VFD + D VL NSM++ ++ G D
Sbjct: 201 HVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDA 260
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
L L M+ G P E TLV IS + + L G+ +HG + F+S+D V + LV
Sbjct: 261 CLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFESHDKVKTALVD 320
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A ++F L +V+W+A+ITGY+ G +AL F ++N + K D +
Sbjct: 321 MYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMN-RVAKPDHIT 379
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM- 367
VL+A + HG +++ G+ FETM
Sbjct: 380 FVGVLSACS-----------HGGLLEEGW------------------------MFFETMI 404
Query: 368 ----SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
+ + Y ++ LG G +A+ I++ + PD + ALL +C V
Sbjct: 405 RDYKIDPTVQHYTCMVDLLGHSGRLDEAYNL---IMQMKVLPDSGVWGALLNSCKIHANV 461
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G R+ E A +Y+ + + AG E
Sbjct: 462 ELGEIALERLIELEPDDAG--NYVILSNIYAQAGKWE 496
>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Brachypodium distachyon]
Length = 646
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 260/501 (51%), Gaps = 28/501 (5%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-----GLRFV 126
W IR A F+ A +LF +++ + AC + S L GLR +
Sbjct: 22 WAHQIRVAASQGDFHHAIALF-----LRMRASDPAAACSSVLTSLPGALKSCAALGLRAL 76
Query: 127 ----HGGAIVSGLGRDSITSSALVTAYSKLS--------------LIDEAIKVFDGVSDP 168
H A+ SG D ++AL+ Y KL +++ KVFD + +
Sbjct: 77 GASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEK 136
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
D+V N+++ G A G ++L L M R G PD +TL ++ E + + G +H
Sbjct: 137 DVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELH 196
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
GF ++ F +V S L+ MYA C + + VF++L D + W++++ G +Q G
Sbjct: 197 GFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVD 256
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
+AL FR++ G K PV +S++ A A++ G +H YVI+ GF+ +V +SS+L+
Sbjct: 257 EALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLI 316
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
DMY KCG + + ++F+ + +I+++ ++I+G LHG +A F + L P+
Sbjct: 317 DMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHI 376
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
TF A+L AC H GLV+ G + F M++ YGI EH+ + LG G LEEAY+FI
Sbjct: 377 TFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISG 436
Query: 469 LPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDV 528
+ +V LL C ++ N+ LAE VA ++F+ +PR ++LSNTY+ GRW++
Sbjct: 437 MKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMGSHIILSNTYSSSGRWNEA 496
Query: 529 MKLRDDIVDNGLRKEAGVSWV 549
LR + G++KE SW+
Sbjct: 497 AHLRKSMRKKGMQKEPACSWI 517
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 187/392 (47%), Gaps = 16/392 (4%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYAL--------------NNVLPSARILFDKTPQRSVF 70
LHAL ++ D F A L+ LY VL S R +FD+ P++ V
Sbjct: 80 LHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVV 139
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
WN+++ A + R +A L + + R KPD+FT + + +E +D+ +HG A
Sbjct: 140 SWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFA 199
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+G D S+L+ Y+ + D ++KVFD + D +L NSM++G A G D++L
Sbjct: 200 TRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDAILWNSMLAGCAQNGSVDEAL 259
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
LF ML G P T LI + L +G+ +H + ++ FD ++SS L+ MY
Sbjct: 260 GLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISSSLIDMY 319
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
+C ++ A +F+ + PD+V+W+A+I G++ G +AL F ++ + K + +
Sbjct: 320 CKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFL 379
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQH-GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+VL A + + V G + H G S+ +AL D + G L M
Sbjct: 380 AVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLGRPGKLEEAYNFISGMKI 439
Query: 370 RNIIT-YNSVILGLGLHGFTYQAFEFFRDIIE 400
+ + +++++ +H T A E + I +
Sbjct: 440 KPTASVWSTLLRACKVHKNTVLAEEVAKKIFD 471
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 116/276 (42%), Gaps = 10/276 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + R ELH + D F + L+ +YA + +FD P R
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
LWNS++ A ++A LF+ +L + +KP T++ + AC + L + +H
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G + SS+L+ Y K + A ++FD + PD+V +MI G A G +
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--- 245
+L LFD M P+ T + +++ L+ G S D Y V S+
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKY----FNSMSDHYGIVPSLEHH 414
Query: 246 --LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
L R + AY+ + + P WS L+
Sbjct: 415 AALADTLGRPGKLEEAYNFISGMKIKPTASVWSTLL 450
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP----GAVI 328
+W+ I + QGD+ A+ F ++ A + + L A KS GA +
Sbjct: 21 SWAHQIRVAASQGDFHHAIALFLRMRASDPAAACSSVLTSLPGALKSCAALGLRALGASL 80
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCG--------------YLGLGIQVFETMSERNIIT 374
H ++ G ++AL+++Y K L +VF+ M E+++++
Sbjct: 81 HALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVS 140
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+N+++LG G +A R++ G PD T S++L G V G E+
Sbjct: 141 WNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMEL 195
>gi|357484133|ref|XP_003612353.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513688|gb|AES95311.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 795
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 160/536 (29%), Positives = 268/536 (50%), Gaps = 11/536 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ ++H +V K D + +V LYA + S R +FD ++ F+W+S+I
Sbjct: 265 LNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISG 324
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y + +R +A + FK++ R ++K D + +AC E DL VHG I +G D
Sbjct: 325 YTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQND 384
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH----CGFWDKSLQLFD 194
+S L+ Y+ + + K+F + D D+V NSMI A CG + +QLF
Sbjct: 385 CFVASVLLNLYASFGELGDVEKLFSRIDDKDIVAWNSMILAQARPGQGCG---RCMQLFQ 441
Query: 195 WMLRLGKTPDE-YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
+ R + TLV ++ + S L G+ IH +KSS + V + LV MY+ C
Sbjct: 442 ELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSEC 501
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
++ A+ F + D +WS++I Q KAL +++ +G + +
Sbjct: 502 KQIDDAFKAFVDIVRKDDSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCI 561
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+A ++ + G +H + I+ G+ V + S+++DMY+KCG + +VF+ + N +
Sbjct: 562 SACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEV 621
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
T+N++I G HG QA E + + G+ P+ TF AL+ AC H G V + +FT M
Sbjct: 622 TFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLM 681
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
++Y I+ K+EHY +V G AG LEEAY + K + LLS C + N +
Sbjct: 682 LDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQIV---QKDGSESAWRTLLSACRNHSNRKI 738
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
E A ++ E +P A ++LSN Y E+G W++ + R + ++K+ G SW+
Sbjct: 739 GEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGNSWL 794
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 214/422 (50%), Gaps = 17/422 (4%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ ++HA + + A L+ Y+ ++ A LFDK P R+V W ++I +
Sbjct: 64 LTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISS 123
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL--PGLRFVHGGAIVSGLG 136
+ + A +F ++ + +P+ T+A + RAC+ N +L GL+ +HG + GL
Sbjct: 124 HLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACT-NRELWSVGLQ-IHGLLVRCGLE 181
Query: 137 RDSITSSALVTAYSK-LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
R+ S+LV Y K + +A++VF G+ + D+V N MISGFA G + +LF
Sbjct: 182 REKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSE 241
Query: 196 ML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PD T L+ S+L+ IHG K + V S +V +YA+C
Sbjct: 242 MWEEQGLKPDRITFASLLKCC---SVLNEVMQIHGIVYKFGAEVDVVVESAMVDLYAKCR 298
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++S +F+S+ D WS++I+GY+ +A+ +F+ + Q K D +++S L
Sbjct: 299 DVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLK 358
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + ++ G +HG +I++G + V+S L+++Y+ G LG ++F + +++I+
Sbjct: 359 ACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRIDDKDIVA 418
Query: 375 YNSVIL-----GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+NS+IL G G G Q F+ R L +T A+L +C + GR+I
Sbjct: 419 WNSMILAQARPGQGC-GRCMQLFQELRRTT--FLQIQGATLVAVLKSCEKDSDLPAGRQI 475
Query: 430 FT 431
+
Sbjct: 476 HS 477
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 158/312 (50%), Gaps = 5/312 (1%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I++ + ++ L++ YSK S A K+FD + + ++V ++IS G
Sbjct: 70 IHAQLIITQYISQTHLANTLLSFYSKSSNFHYAHKLFDKMPNRNVVTWTTLISSHLKYGS 129
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
K+ ++F+ M + P+E T L+ L SVG IHG ++ + + S
Sbjct: 130 VSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSS 189
Query: 246 LVSMYAR-CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL-NMQGKK 303
LV MY + + + A VF L D+V W+ +I+G++Q GD+ F ++ QG K
Sbjct: 190 LVYMYLKGGDDLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQRLFSEMWEEQGLK 249
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D + AS+L + V IHG V + G E+ V+V SA+VD+Y+KC + ++
Sbjct: 250 PDRITFASLLKCCSVLNEVMQ---IHGIVYKFGAEVDVVVESAMVDLYAKCRDVSSCRKI 306
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F++M +++ ++S+I G ++ +A FF+D+ + + D+ S+ L AC +
Sbjct: 307 FDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDL 366
Query: 424 NDGREIFTRMTE 435
N G ++ M +
Sbjct: 367 NTGVQVHGLMIK 378
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 17/226 (7%)
Query: 208 LVGLIS-GLWEPSLLSVGQG-----------IHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
+G+I L EP LLS+ + IH + + + S ++++ L+S Y++ +
Sbjct: 39 FIGMIGRALLEPFLLSLAKKSNPIILTQCNQIHAQLIITQYISQTHLANTLLSFYSKSSN 98
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A+ +F+ + + ++VTW+ LI+ + + G KA F + + ++ + A VL
Sbjct: 99 FHYAHKLFDKMPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFA-VLLR 157
Query: 316 AAKSANVWP-GAVIHGYVIQHGFELSVMVSSALVDMYSKCG-YLGLGIQVFETMSERNII 373
A + +W G IHG +++ G E S+LV MY K G L ++VF + ER+++
Sbjct: 158 ACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFYGLLERDVV 217
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDI-IEKGLNPDESTFSALLCACC 418
+N +I G +G F ++ E+GL PD TF++LL CC
Sbjct: 218 AWNVMISGFAQNGDFRMVQRLFSEMWEEQGLKPDRITFASLL-KCC 262
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 9/259 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + L +++H+L+ K+SL R LV +Y+ + A F ++
Sbjct: 459 VLKSCEKDSDLPAGRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKD 518
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
W+SII + A L K +L + +++ ACS+ + + +H
Sbjct: 519 DSSWSSIIGTCKQNRMESKALELCKEMLDEGINFTSYSLPLCISACSQLLTISEGKQLHV 578
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI SG D S+++ Y+K I+E+ KVFD P+ V N++ISG+AH G +
Sbjct: 579 FAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQLKPNEVTFNAIISGYAHHGKAQQ 638
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS----- 243
++++ + + G P+ T + L+S V + H F L D Y
Sbjct: 639 AIEVLSKLEKNGVAPNHVTFLALMSACSHAGY--VEETSHLFTLM--LDKYKIKPKSEHY 694
Query: 244 SVLVSMYARCNCMNSAYHV 262
S LV Y R + AY +
Sbjct: 695 SCLVDAYGRAGRLEEAYQI 713
>gi|297740547|emb|CBI30729.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/483 (32%), Positives = 242/483 (50%), Gaps = 41/483 (8%)
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS---LIDEA 158
P ++A + + SE L H + SGL + +S L+ + S S I A
Sbjct: 8 PPILSFAEMATSISE------LHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYA 61
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
+F + +P+ + N++I +A+ + +L +F ML PD+YT +
Sbjct: 62 HSIFSRIPNPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSF 121
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL- 277
S + G+ IHG LK+ ++ + L+ +YA C C+ A H+ + + D+V+W+AL
Sbjct: 122 SGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALL 181
Query: 278 -------------------------------ITGYSQQGDYGKALYYFRKLNMQGKKADP 306
ITGYS G + + L F + G K D
Sbjct: 182 SAYAERGLMELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDN 241
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ SVL+A A + G +H Y+ ++G + V++ALVDMYSKCG + ++VF +
Sbjct: 242 CTLVSVLSACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNS 301
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
++I T+NS+I GL HG A + F +++ +G P+E TF +L AC GL+++G
Sbjct: 302 CLRKDISTWNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEG 361
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
RE+F M +GIQ EHY MV LLG G LEEA + +P+ V +LL C
Sbjct: 362 REMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACR 421
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+GN +LAE VA +L E P++ + V LSN YA GRW DVM++R + G+RK+ G
Sbjct: 422 NHGNVELAERVAQKLLELSPQESSSFVQLSNMYASMGRWKDVMEVRQKMRAQGVRKDPGC 481
Query: 547 SWV 549
S +
Sbjct: 482 SMI 484
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/438 (26%), Positives = 216/438 (49%), Gaps = 39/438 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNN---VLPSARILFDKTP 65
+L ++ S+S + HA + K+ L+ F A++L+ + N+ +P A +F + P
Sbjct: 10 ILSFAEMATSISELHQAHAHILKSGLIHSTFAASRLIASVSTNSHAQAIPYAHSIFSRIP 69
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ ++WN+IIRAYA + A ++F +L + PD +T+ ++C S + R
Sbjct: 70 NPNSYMWNTIIRAYANSPTPEAALTIFHQMLHASVLPDKYTFTFALKSCGSFSGVEEGRQ 129
Query: 126 VHGGAIVSGLG-------------------------------RDSITSSALVTAYSKLSL 154
+HG + +GLG RD ++ +AL++AY++ L
Sbjct: 130 IHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDRMLERDVVSWNALLSAYAERGL 189
Query: 155 IDEAI-KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
++ A +VF ++V N+MI+G++H G + + L LF+ M G PD TLV ++S
Sbjct: 190 MELASRRVFGETPVKNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKPDNCTLVSVLS 249
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
LS G+ +H + K+ +V++ LV MY++C + A VFNS D+ T
Sbjct: 250 ACAHVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKDIST 309
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+++I+G S G AL F ++ ++G K + V VL+A +++ + G + ++
Sbjct: 310 WNSIISGLSTHGSGQHALQIFSEMLVEGFKPNEVTFVCVLSACSRAGLLDEGREMFNLMV 369
Query: 334 Q-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI-ITYNSVILGLGLHGFTYQA 391
HG + ++ +VD+ + G L ++ + M ++ + + S++ HG A
Sbjct: 370 HVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKMPQKEASVVWESLLGACRNHGNVELA 429
Query: 392 FEFFRDIIEKGLNPDEST 409
+ ++E L+P ES+
Sbjct: 430 ERVAQKLLE--LSPQESS 445
>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
Length = 849
Score = 265 bits (677), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 276/532 (51%), Gaps = 3/532 (0%)
Query: 21 RTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
+++HA A L D T L+ +YA + A ++FD+ + + N++I AY
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
DA S F + + L+P+ TYA + RAC+ N R H I+S L D
Sbjct: 260 IQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDV 319
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ ++ALV+ YS+ +++A +VFD + ++V N MI+G+A G+ D++LQL+ M
Sbjct: 320 VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PDE T V ++ L+ G+ IH + + +DS V S L++MY+ C + A
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439
Query: 260 YHVFNS--LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
VF+ H +++W+A++T ++ G+ AL FRK++++G KA+ V S + A +
Sbjct: 440 VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVKANVVTFVSTIDACS 499
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G I VI G+ + V++ ++L+++Y KCG L ++VF +S +NI+T+N+
Sbjct: 500 SIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLDYALEVFHHLSFKNIVTWNT 559
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
++ +G + E +++ G P+E T +L C H GLV F M +
Sbjct: 560 ILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGH 619
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
+ +EHY +V LLG +G LEE +FI S P +D + +LL C I+ + +
Sbjct: 620 CLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRA 679
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++ DP+ + V+LSN +A G D V L + ++KE S++
Sbjct: 680 ARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYI 731
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 187/393 (47%), Gaps = 3/393 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
+V Y + AR++F +V+ W ++ AYA L + + + P+
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181
Query: 104 NFTYACITRACSENSDLPGLRFVHG-GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
T A + A SE D R +H A L D + +AL+ Y+K I A VF
Sbjct: 182 AVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVF 241
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + DL CN+MIS + G+ ++ F+ + G P++ T L + S
Sbjct: 242 DQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYS 301
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ H + S V++ LVSMY+RC + A VF+ + ++VTW+ +I GY+
Sbjct: 302 DARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYA 361
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q+G +AL + + G + D + +VL + + + ++ G IH +V+ G++ S+
Sbjct: 362 QEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLT 421
Query: 343 VSSALVDMYSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V SAL+ MYS CG LG + VF + ++I++ +++ L +G A FR +
Sbjct: 422 VLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDL 481
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+G+ + TF + + AC G + +G IF R+
Sbjct: 482 EGVKANVVTFVSTIDACSSIGALVEGHAIFERV 514
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 159/354 (44%), Gaps = 6/354 (1%)
Query: 86 NDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR---DSITS 142
D K +L K D A + D+ L+ + A +S R D +
Sbjct: 62 EDVKQRLASLEEQNQKSDFVDPAAYVSLLKQAGDVTALKTIQ--AHISHSKRFSGDRLLL 119
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ +V AY K + +A VF + P++ +++ +A G L+L M LG
Sbjct: 120 NCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVW 179
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNCMNSAYH 261
P+ TL +I + E + IH + +YD V + L+ MYA+C + A
Sbjct: 180 PNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEV 239
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VF+ + DL +A+I+ Y Q G A+ F ++ G + + V A + A A +
Sbjct: 240 VFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGV 299
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
V H I V+V++ALV MYS+CG L +VF+ M +N++T+N +I G
Sbjct: 300 YSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAG 359
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
G+T +A + + + G+ PDE TF +L +C + GR+I + +
Sbjct: 360 YAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVD 413
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 134/296 (45%), Gaps = 2/296 (0%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S + H + L D T LV +Y+ L AR +FD+ P ++V WN +I Y
Sbjct: 301 SDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGY 360
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A ++A L+ ++ ++PD T+ + +CS L R +H + +G
Sbjct: 361 AQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSL 420
Query: 140 ITSSALVTAYSKLSLIDEAIKVF-DGVSDPDLVLC-NSMISGFAHCGFWDKSLQLFDWML 197
SAL+T YS + +A+ VF GV+ V+ +M++ G +L LF M
Sbjct: 421 TVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMD 480
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G + T V I L G I + + + + + L+++Y +C ++
Sbjct: 481 LEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSLINLYGKCGRLD 540
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
A VF+ L ++VTW+ ++ SQ G+ + +++++ G + + + + ++L
Sbjct: 541 YALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNEMTLLNML 596
>gi|225450995|ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240 [Vitis vinifera]
Length = 565
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 158/552 (28%), Positives = 288/552 (52%), Gaps = 10/552 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRL--YALNNVLPSARILFDKTPQ 66
+L L + ++++ K LH L+ S+++D ++LV Y+ + L A+ +F++ +
Sbjct: 8 ILSLLEKCKTMAELKRLHGLMITTSVIQDVIPLSRLVDFCAYSDSGNLNYAKSVFNQIDR 67
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
S+++WNS+I+ Y+++ ++A ++++ + + PD+FT+ + +ACS + + V
Sbjct: 68 PSLYIWNSMIKGYSISESPDEALTMYREMRQKGYAPDHFTFPFVLKACSLVNGYNLGQCV 127
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H + +G D ++AL+ Y+ ++ A+KVFD + ++V S+I+G
Sbjct: 128 HNCIVKTGFEVDVYAATALLQMYAACGDMEAALKVFDDIPKWNVVAWTSLIAGCISNDCP 187
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD------ 240
++++++ M P+E T+V ++ L+ G+ +H + D +
Sbjct: 188 SEAVRVYKDMELWSVAPNEITMVNVLVACARSRDLNAGRWVHDRTGQMGLDPFQSNSNFN 247
Query: 241 -YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
+++ +V MYA+C + +A +FN + H +LV W+++I Y+Q G +AL F + +
Sbjct: 248 VILATAIVDMYAKCGSLKTARDLFNKMPHRNLVAWNSMIGAYNQYGQANEALDLFSDMRI 307
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G D V+ A A + G +H YV + + +ALVDMY+K G
Sbjct: 308 AGFDPDKATFLCVIGACAHLGALVSGQALHAYVSKTNLTDDTAIGTALVDMYAKSGDAER 367
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE-KGLNPDESTFSALLCACC 418
QVF + ++++ + S+I+GL +HG +A FF+ + E L PDE T+ +L AC
Sbjct: 368 AQQVFSELQKKDVTAWTSLIIGLAMHGHGEEALTFFKKMQEDTALIPDEITYIGVLSACS 427
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H G V DG+ F M +GI+ T+HY MV LL AG L EA + +P + A+
Sbjct: 428 HVGKVEDGKNHFISMKNVHGIEPTTQHYGCMVDLLSRAGRLGEAERLVEKMPVEPNTAIW 487
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
ALL+ C IY N D+A+ V ++ E + V+LSN YA RW++V R+ + +
Sbjct: 488 SALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELMKER 547
Query: 539 GLRKEAGVSWVS 550
++K G S V
Sbjct: 548 KIQKSLGHSSVE 559
>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g22070-like [Cucumis sativus]
Length = 782
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 173/624 (27%), Positives = 294/624 (47%), Gaps = 97/624 (15%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA-- 80
+ +H + K L + L+ YA L A +FD+ P +S F WN++I YA
Sbjct: 30 RSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAKQ 89
Query: 81 ----LAHR-------------------------FNDAKSLFKNLLRTQLKPDNFTYACIT 111
++ R F++A +F ++ ++ P FT + +
Sbjct: 90 GNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVL 149
Query: 112 RACSENSDLPGLRFVHGGAIVSGLG-------------------------------RDSI 140
+C+ N L R +H + GLG ++
Sbjct: 150 SSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNIS 209
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
T +AL++ Y + + A F+ + D D+V NSMISG++ G+ ++L +F ML
Sbjct: 210 TWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEP 269
Query: 201 K-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA-------- 251
PD +TL ++S L++G+ IH + L++ ++ V + L+SMYA
Sbjct: 270 SLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVEIA 329
Query: 252 -------RCNCMN------------------SAYHVFNSLFHPDLVTWSALITGYSQQGD 286
R + +N A +FN L D+V W+A+I GY Q G
Sbjct: 330 RLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGL 389
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ AL FR + +G + + +A++L+ ++ + G IH I+ G + V++A
Sbjct: 390 WNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNA 449
Query: 347 LVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
L+ MY+K G + + +VF+ + ++ I+++ S+I+ L HG +A F ++ G+ P
Sbjct: 450 LIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGMKP 509
Query: 406 DESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
D T+ +L AC H GLV GR+ + MTE + I+ HY M+ L G AG L+EAY F
Sbjct: 510 DHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF 569
Query: 466 IWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRW 525
I S+P D G+LL+ C I+ N+DLA++ A +L DP + L+N Y+ G+W
Sbjct: 570 IESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACGKW 629
Query: 526 DDVMKLRDDIVDNGLRKEAGVSWV 549
++ + R + D G+RKE G+SW+
Sbjct: 630 ENAAQTRKLMKDRGVRKEKGISWI 653
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/445 (24%), Positives = 195/445 (43%), Gaps = 68/445 (15%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL ++Q+L +++H+ V K L AT L+ +YA A+++FD+ ++
Sbjct: 148 VLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKN 207
Query: 69 VFLWNSIIRAYALAHRFNDAKSLF--------------------------------KNLL 96
+ WN++I Y + +F A S F K L
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVH--------------GGAIVSGLGRDS--- 139
LKPDNFT A I AC+ L + +H G A++S +
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327
Query: 140 ----------------ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
I ++L+ Y+KL + A ++F+ + D D+V +MI G+
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G W+ +L+LF M+ G P+ YTL ++S ++L G+ IH +K+ S V+
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447
Query: 244 SVLVSMYARCNCMNSAYHVFN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++MYA+ +N A VF+ ++V+W+++I +Q G +A+ F ++ G
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGI 361
K D + VL+A V G + + + H E ++ + ++D+Y + G L
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567
Query: 362 QVFETMS-ERNIITYNSVILGLGLH 385
E+M E + I + S++ +H
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIH 592
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 166/384 (43%), Gaps = 76/384 (19%)
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
G+ +H +K Y+ + L++ YA+ + A+HVF+ + +W+ LI+GY++
Sbjct: 29 GRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPLKSTFSWNTLISGYAK 88
Query: 284 QGD-------------------------------YGKALYYFRKLNMQGKKADPVLIASV 312
QG+ + A++ F K+ + +++V
Sbjct: 89 QGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNV 148
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC------------------ 354
L++ A + + G IH +V++ G V V+++L++MY+KC
Sbjct: 149 LSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNI 208
Query: 355 -------------GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII-E 400
G L FE M +R+I+++NS+I G G+ +A F ++ E
Sbjct: 209 STWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNE 268
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY----IYMVKLLGLA 456
L PD T +++L AC + +N G++I Y ++A+TE ++ + +
Sbjct: 269 PSLKPDNFTLASILSACANLEKLNIGKQIHA-----YILRAETETSGAVGNALISMYAKS 323
Query: 457 GNLEEAYSFI-WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVML 515
G +E A + + ++ +LL GN A + ++L + D A+ M+
Sbjct: 324 GGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVV--AWTAMI 381
Query: 516 SNTYAEDGRWDDVMKLRDDIVDNG 539
Y ++G W+D ++L +V+ G
Sbjct: 382 VG-YVQNGLWNDALELFRLMVNEG 404
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 4/127 (3%)
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
A +L + + + + G +H +I+ G L V + + L+ Y+K G L VF+ M
Sbjct: 14 AHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMPL 73
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ ++N++I G G FE R ++ + + D +++A++ GL ++ +
Sbjct: 74 KSTFSWNTLISGYAKQG----NFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWM 129
Query: 430 FTRMTEE 436
F +M E
Sbjct: 130 FAKMISE 136
>gi|147833409|emb|CAN68525.1| hypothetical protein VITISV_018083 [Vitis vinifera]
Length = 1796
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 148/501 (29%), Positives = 266/501 (53%), Gaps = 12/501 (2%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYAC---- 109
L AR +FD+ P+R V WN++I Y F+DA F + + ++P FTY+
Sbjct: 792 LERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFSEMQKAGIRPSGFTYSTLLSF 851
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLG-RDSITSSALVTAYSKLSLIDEAIKVFDGVSDP 168
++ AC +H I +G+ + + ++L+ Y K ++D A VF + +
Sbjct: 852 VSSACRGKQ-------IHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEEL 904
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIH 228
D++ NS+I G+ + +L+ F M +G +PD++T+ +I+ L G+ I
Sbjct: 905 DIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIF 964
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG 288
C++ F S VSS + ++++CN + + VF ++ D V +A+I+ Y+ G
Sbjct: 965 ALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGE 1024
Query: 289 KALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALV 348
AL F + + ++ VL+A + V G+ IH V++ G E V+V+S+LV
Sbjct: 1025 NALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHSLVVKSGLESDVIVASSLV 1084
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+MY+K G + ++ F + R++I++N++I+GL +G +A E F++++ G PDE
Sbjct: 1085 EMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEI 1144
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
T + +L AC GGLV++G IF+ M +EYG+ EHY +V ++ G L+EA +
Sbjct: 1145 TLAGVLLACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVEL 1204
Query: 469 LPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDV 528
+P + G+LL C IYG+ E VA ++ E +P+ ++L+ Y GRW+ +
Sbjct: 1205 MPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEPQSSLPYLVLAQAYEMRGRWESL 1264
Query: 529 MKLRDDIVDNGLRKEAGVSWV 549
+++ + + G+RK G SW+
Sbjct: 1265 VRVXRAMKEKGVRKVIGCSWI 1285
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/574 (27%), Positives = 264/574 (45%), Gaps = 65/574 (11%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
+D F ++ +A L AR LF++ P ++ WNS+I YA R +A LFK+L
Sbjct: 102 KDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHGYACNGRPKEAVGLFKDL 161
Query: 96 LRTQLKP---DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKL 152
L+ D F A + AC+ L + +H +V + DS+ S+LV Y K
Sbjct: 162 SLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVVDEVEFDSVLGSSLVNLYGKC 221
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG------------------FWD------- 187
ID A V + + +PD +++ISG+A CG W+
Sbjct: 222 GDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRIFCLKSNXCVVLWNSMISGYV 281
Query: 188 ------KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
++L+LF+ M R G D T ++S ++ G +H K F +
Sbjct: 282 ANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGIIDQGIQVHAHVYKVGFTNDII 341
Query: 242 VSSVLVSMYARC-----------------------------NC--MNSAYHVFNSLFHPD 270
+ S LV MY++C NC ++ A +F+++
Sbjct: 342 IDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVYSNCGRIDDARQIFDTMPSKS 401
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
L++W+++I G+SQ +AL F ++N G + D +A V++A A +++ G I
Sbjct: 402 LISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLAGVISACASISSLELGEQIFA 461
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
G E ++S++LVD Y KCG + G ++F+ M + + + +NS+++G +G +
Sbjct: 462 RATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSDEVPWNSMLMGYATNGHGIE 521
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A F + G+ P + TF +L AC H GLV +GR+ F M +Y I EHY MV
Sbjct: 522 ALNVFDQMRSVGVQPTDITFVGVLSACDHCGLVEEGRKWFYAMKLDYHINPGIEHYSCMV 581
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
L AG LE+A + I +P D ++ ++L C +GN+ L + VA ++ + DP
Sbjct: 582 DLYARAGLLEDAMNLIEQMPLKADTSMWSSVLRGCVAHGNNILGKKVAKRIIDLDPENSG 641
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
V LS YA W ++R + D + K+
Sbjct: 642 AYVQLSGIYATFEDWGRSAQVRKLMYDKKIPKDT 675
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 183/374 (48%), Gaps = 7/374 (1%)
Query: 18 SLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
S R K++HA ++ L + L+ +Y V+ A +F + + WNS+I
Sbjct: 854 SACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKFGVVDYAFGVFITMEELDIISWNSLI 913
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+ + N A F + PD FT + + CS DL + I G
Sbjct: 914 WSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVITVCSNLQDLEKGEQIFALCIRVGFL 973
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
+SI SSA + +SK + ++++++VF+ + D VLCN+MIS +A GF + +LQLF
Sbjct: 974 SNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSVLCNAMISSYAWHGFGENALQLFVLT 1033
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQG--IHGFCLKSSFDSYDYVSSVLVSMYARCN 254
LR P E+TL ++S + LL V QG IH +KS +S V+S LV MYA+
Sbjct: 1034 LRENLRPTEFTLSIVLSAV--SILLPVDQGSQIHSLVVKSGLESDVIVASSLVEMYAKFG 1091
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++SA F + DL++W+ +I G + G KAL F++L + G D + +A VL
Sbjct: 1092 LIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSKALEIFKELLIGGPPPDEITLAGVLL 1151
Query: 315 AAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNI 372
A V G ++ ++G ++ + +VDM S+ G L + + E M E +
Sbjct: 1152 ACNVGGLVDEGLSIFSSMEKEYGVIPAIEHYACIVDMMSRGGKLKEAMDIVELMPHEPSG 1211
Query: 373 ITYNSVILGLGLHG 386
+ + S++ ++G
Sbjct: 1212 LIWGSLLCACEIYG 1225
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/503 (22%), Positives = 212/503 (42%), Gaps = 113/503 (22%)
Query: 3 FNLHFLVLELS--KSHQSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARI 59
+LH L +L ++ S+ R + LH L K+ +L +L+++Y+ N + A+
Sbjct: 4 LDLHSLARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQ 63
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
LF++ P+R+ F WN++I Y + + LF ++
Sbjct: 64 LFEEMPKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPH---------------------- 101
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
+D+ + + +++ ++K ++ A ++F+ + + + NSMI G
Sbjct: 102 -----------------KDAFSWNVVISGFAKEGNLEVARRLFNEMPWKNGIAWNSMIHG 144
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTP------DEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
+A G +++ LF L P D + L ++ L G+ IH +
Sbjct: 145 YACNGRPKEAVGLFK---DLSLNPLERFCGDTFVLATVVGACTNLGALDCGKQIHARIVV 201
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD----------------------- 270
+ + S LV++Y +C ++SA HV N + PD
Sbjct: 202 DEVEFDSVLGSSLVNLYGKCGDIDSANHVLNLMKEPDAFSLSALISGYASCGRMNDARRI 261
Query: 271 --------LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
+V W+++I+GY + +AL F + +G + D ASVL+A + +
Sbjct: 262 FCLKSNXCVVLWNSMISGYVANNEALEALELFNNMRRKGVQEDYSTFASVLSACSTLGII 321
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSK----------------------------- 353
G +H +V + GF +++ SALVDMYSK
Sbjct: 322 DQGIQVHAHVYKVGFTNDIIIDSALVDMYSKCRRPDDACKLFSDLQAYDTILLNSMITVY 381
Query: 354 --CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
CG + Q+F+TM +++I++NS+I+G + +A + F ++ + GL D+ + +
Sbjct: 382 SNCGRIDDARQIFDTMPSKSLISWNSMIVGFSQNACPIEALDLFCEMNKLGLRMDKFSLA 441
Query: 412 ALLCACCHGGLVNDGREIFTRMT 434
++ AC + G +IF R T
Sbjct: 442 GVISACASISSLELGEQIFARAT 464
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 147/296 (49%), Gaps = 4/296 (1%)
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ ++ I+ + + A+ + ++ A VFD + D+V N+MISG+ G +D + + F
Sbjct: 772 IDKNLISWNIFLKAFVRFGELERARDVFDEMPKRDVVSWNTMISGYVSFGLFDDAFRFFS 831
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDYVSSVLVSMYARC 253
M + G P +T L+S + S G+ IH +++ D S V + L+ MY +
Sbjct: 832 EMQKAGIRPSGFTYSTLLSFV---SSACRGKQIHASMIRNGVDLSNVVVGNSLIGMYGKF 888
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
++ A+ VF ++ D+++W++LI + G AL F + G D +++V+
Sbjct: 889 GVVDYAFGVFITMEELDIISWNSLIWSCGKSGYQNLALRQFVLMRSVGYSPDQFTVSTVI 948
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
+ ++ G I I+ GF + +VSSA +D++SKC L ++VFE + + + +
Sbjct: 949 TVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWDSV 1008
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
N++I HGF A + F + + L P E T S +L A V+ G +I
Sbjct: 1009 LCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQI 1064
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 147/326 (45%), Gaps = 14/326 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ + + Q L + +++ AL + L + ++ + L++ N L + +F++ Q
Sbjct: 947 VITVCSNLQDLEKGEQIFALCIRVGFLSNSIVSSASIDLFSKCNRLEDSVRVFEEIYQWD 1006
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
L N++I +YA +A LF LR L+P FT + + A S + +H
Sbjct: 1007 SVLCNAMISSYAWHGFGENALQLFVLTLRENLRPTEFTLSIVLSAVSILLPVDQGSQIHS 1066
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ SGL D I +S+LV Y+K LID A+K F + DL+ N+MI G A+ G K
Sbjct: 1067 LVVKSGLESDVIVASSLVEMYAKFGLIDSAMKTFAKIGARDLISWNTMIMGLAYNGRVSK 1126
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--- 245
+L++F +L G PDE TL G++ L+ G I S Y + ++
Sbjct: 1127 ALEIFKELLIGGPPPDEITLAGVLLACNVGGLVDEGLSI----FSSMEKEYGVIPAIEHY 1182
Query: 246 --LVSMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYG-KALYYFRKLNMQG 301
+V M +R + A + + H P + W +L+ GD R + ++
Sbjct: 1183 ACIVDMMSRGGKLKEAMDIVELMPHEPSGLIWGSLLCACEIYGDLRFTERVAERVMELEP 1242
Query: 302 KKADPVLIASVLAAAAKSANVWPGAV 327
+ + P L VLA A + W V
Sbjct: 1243 QSSLPYL---VLAQAYEMRGRWESLV 1265
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 5/132 (3%)
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQVFETM 367
+A L + +++ G +H ++ G SV+ + + L+ MYS+C + Q+FE M
Sbjct: 9 LARQLGSCNNYGSIYRGRXLHILFLKSGVLHSVLSIGNRLLQMYSRCNSMREAQQLFEEM 68
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+RN ++N++I G G ++ E F + K D +++ ++ G + R
Sbjct: 69 PKRNCFSWNTMIEGYLKSGSKGKSLELFDSMPHK----DAFSWNVVISGFAKEGNLEVAR 124
Query: 428 EIFTRMTEEYGI 439
+F M + GI
Sbjct: 125 RLFNEMPWKNGI 136
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 46/106 (43%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V+ S SL +++ A L D +T LV Y ++ R LFD+ +
Sbjct: 443 VISACASISSLELGEQIFARATIIGLEFDQIISTSLVDFYCKCGLVEHGRKLFDRMMKSD 502
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
WNS++ YA +A ++F + ++P + T+ + AC
Sbjct: 503 EVPWNSMLMGYATNGHGIEALNVFDQMRSVGVQPTDITFVGVLSAC 548
>gi|15229753|ref|NP_190611.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75202753|sp|Q9SCT2.1|PP277_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g50420
gi|6561982|emb|CAB62471.1| putative protein [Arabidopsis thaliana]
gi|332645144|gb|AEE78665.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 794
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 163/515 (31%), Positives = 263/515 (51%), Gaps = 3/515 (0%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
T ++ +Y+ L SAR +FD R WN++I + D F+N+L + +
Sbjct: 238 TSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVD 297
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
P FTY+ + CS+ + +H IVS D +AL+ Y + EA V
Sbjct: 298 PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYV 357
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSL 220
F + +P+LV NS+ISG + GF ++++ ++ +LR+ PDEYT IS EP
Sbjct: 358 FGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPER 417
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
G+ +HG K ++ +V + L+SMY + SA VF+ + D+V W+ +I G
Sbjct: 418 FVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVG 477
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
+S+ G+ A+ +F ++ + ++D ++SV+ A + A + G V H I+ GF+
Sbjct: 478 HSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCV 537
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ V ALVDMY K G +F S ++ +NS++ HG +A FF I+E
Sbjct: 538 MSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILE 597
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLE 460
G PD T+ +LL AC H G G+ ++ +M E+ GI+A +HY MV L+ AG ++
Sbjct: 598 NGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVD 656
Query: 461 EAYSFIWSLPKPVDPA-VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
EA I P + A + LLS C N + A Q+ + DP A ++LSN Y
Sbjct: 657 EALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLY 716
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
A +GRW+DV ++R I K+ G+SW+ ++N
Sbjct: 717 AVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNN 751
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 131/504 (25%), Positives = 243/504 (48%), Gaps = 10/504 (1%)
Query: 9 VLELSKSHQS---LSRTKELHALVAKA---SLLRDPFYATKLVRLYALNNVLPSARILFD 62
V+EL++ S L R +++HALV A + P+ L+ +Y L AR +FD
Sbjct: 97 VVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFD 156
Query: 63 KTPQRSVFLWNSIIRAYALAHRFND-AKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
K P R+V +N++ AY+ F A L ++ +KP++ T+ + + C+ D+
Sbjct: 157 KMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVL 216
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
++ I G + + ++++ YS ++ A ++FD V++ D V N+MI G
Sbjct: 217 MGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSL 276
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
+ L F ML G P ++T +++G + S+G+ IH + S +
Sbjct: 277 KNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLP 336
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQ 300
+ + L+ MY C M A++VF + +P+LV+W+++I+G S+ G +A+ +R+ L M
Sbjct: 337 LDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMS 396
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ D ++ ++A A+ G ++HG V + G+E SV V + L+ MY K
Sbjct: 397 TPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESA 456
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF+ M ER+++ + +I+G G + A +FF ++ + D + S+++ AC
Sbjct: 457 QKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDM 516
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
++ G E+F + G +V + G G E A + I+SL D +
Sbjct: 517 AMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET-IFSLASNPDLKCWNS 574
Query: 481 LLSCCHIYGNSDLAEIVAHQLFEN 504
+L +G + A Q+ EN
Sbjct: 575 MLGAYSQHGMVEKALSFFEQILEN 598
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 173/390 (44%), Gaps = 11/390 (2%)
Query: 38 PFYATKLVRLYALNNVLPSARILFDKTPQRSV---FLWNSIIRAYALAHRFNDAKSLFKN 94
P+ L+ +Y + L AR +FDK PQR++ F +++ ++ + +
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 95 LLRTQLKPDNFTYACI---TRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA---LVTA 148
P N + + TR C + L R +H + +G G + + A L++
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISM 141
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGFWDKSLQLFDWMLRLGKTPDEYT 207
Y + +++A KVFD + ++V N++ S ++ + F + L M P+ T
Sbjct: 142 YVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSST 201
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLF 267
L+ + +G ++ +K + V + ++ MY+ C + SA +F+ +
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVN 261
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
+ D V W+ +I G + L +FR + M G + VL +K + G +
Sbjct: 262 NRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKL 321
Query: 328 IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGF 387
IH +I + + +AL+DMY CG + VF + N++++NS+I G +GF
Sbjct: 322 IHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGF 381
Query: 388 TYQAFEFFRDIIEKGL-NPDESTFSALLCA 416
QA +R ++ PDE TFSA + A
Sbjct: 382 GEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 87/192 (45%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH V K R F T L+ +Y N SA+ +FD +R V LW +I ++
Sbjct: 422 KLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRL 481
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A F + R + + D F+ + + ACS+ + L H AI +G
Sbjct: 482 GNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVC 541
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
ALV Y K + A +F S+PDL NSM+ ++ G +K+L F+ +L G
Sbjct: 542 GALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFM 601
Query: 203 PDEYTLVGLISG 214
PD T + L++
Sbjct: 602 PDAVTYLSLLAA 613
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 20/194 (10%)
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY----------SQQGDYG 288
Y Y ++ L+SMY RC+ + A VF+ + ++VT L + SQ G
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 289 K-ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG---FELSVMVS 344
+ +F LN + V K A IH V+ G S +
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRAR-----QIHALVLTAGAGAATESPYAN 135
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH-GFTYQAFEFFRDIIEKGL 403
+ L+ MY +CG L +VF+ M RN+++YN++ + F AF + + +
Sbjct: 136 NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYV 195
Query: 404 NPDESTFSALLCAC 417
P+ STF++L+ C
Sbjct: 196 KPNSSTFTSLVQVC 209
>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
Length = 677
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 169/544 (31%), Positives = 276/544 (50%), Gaps = 40/544 (7%)
Query: 9 VLELSKSHQSLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+L+++ ++L K+LH+ ++ +L +P KL+R YA R +FD+ +
Sbjct: 44 ILDVNPDAKTL---KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDK 100
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFV 126
+V +N +IR+Y + DA +FK + PDN+TY C+ +ACS + +L GL+ +
Sbjct: 101 NVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQ-I 159
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG + GL + + LV+ Y K +D A +V D + D+V NSM++G+A G +
Sbjct: 160 HGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAARRVLDEMPGRDMVSWNSMVAGYAQNGRF 219
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ +L+L M L PD T+ L+ + +S D+ YV +
Sbjct: 220 NDALKLCREMEDLKLKPDAGTMGSLLPAV----------------TNTSCDNVLYVKDMF 263
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
V + + L++W+ +I Y +A+ + ++ + G + D
Sbjct: 264 VKLKEK-----------------SLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDA 306
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V I+SVL A + G IH YV + ++++ +AL+DMY+KCG L VF+
Sbjct: 307 VSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQ 366
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M R+++++ S+I G+ G A F+ + + G PD F ++L AC H GLV++G
Sbjct: 367 MMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEG 426
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
R F M EYGI EHY MV LLG AG ++EAY +P + V G+LLS C
Sbjct: 427 RYCFNLMA-EYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSACR 485
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
+Y + ++A + A LF+ P + Y V+LSN YA+ GRW DV +R + G++K G
Sbjct: 486 VYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIMNSKGIKKIPGN 545
Query: 547 SWVS 550
S V
Sbjct: 546 SNVE 549
>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 265 bits (677), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 145/439 (33%), Positives = 242/439 (55%), Gaps = 3/439 (0%)
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C++ G R H I GL D +TS+ L+ YSK SL+D A K F+ + LV
Sbjct: 53 CAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVKSLVSW 112
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL-WEPSLLSVGQGIHGFCL 232
N++I ++L+L M R G +E+T+ ++ ++ ++L Q +H F +
Sbjct: 113 NTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQ-LHAFSI 171
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
K++ DS +V + L+ +YA+C+ + A +F S+ + VTWS+++ GY Q G + +AL
Sbjct: 172 KAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQNGFHEEALL 231
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
FR + G DP +I+S ++A A A + G +H + GF ++ VSS+L+DMY+
Sbjct: 232 IFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSSLIDMYA 291
Query: 353 KCGYLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
KCG + VF+ + E R+I+ +N++I G H +A F + ++G PD+ T+
Sbjct: 292 KCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGFFPDDVTYV 351
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+L AC H GL +G++ F M ++ + HY M+ +LG AG + +AY I +P
Sbjct: 352 CVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPF 411
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
++ G+LL+ C IYGN + AEI A LFE +P ++L+N YA + +WD+V +
Sbjct: 412 NATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARA 471
Query: 532 RDDIVDNGLRKEAGVSWVS 550
R + + +RKE G SW+
Sbjct: 472 RKLLRETDVRKERGTSWIE 490
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 177/366 (48%), Gaps = 3/366 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
NLH+L+ +K+ S+ + HA + + L D + L+ +Y+ +++ SAR F++
Sbjct: 45 NLHYLLQLCAKTRSSMG-GRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNE 103
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
P +S+ WN++I A +A L + R + FT + + C+ +
Sbjct: 104 MPVKSLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILEC 163
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H +I + + + +AL+ Y+K S I +A ++F+ + + + V +SM++G+
Sbjct: 164 MQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWSSMMAGYVQN 223
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
GF +++L +F +G D + + +S + L G+ +H KS F S YVS
Sbjct: 224 GFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVS 283
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
S L+ MYA+C C+ AY VF + +V W+A+I+G+++ +A+ F K+ +G
Sbjct: 284 SSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMILFEKMQQRGF 343
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYLGLGI 361
D V VL A + G ++ QH SV+ S ++D+ + G +
Sbjct: 344 FPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILGRAGLVHKAY 403
Query: 362 QVFETM 367
+ E M
Sbjct: 404 DLIERM 409
>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 637
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 143/445 (32%), Positives = 244/445 (54%), Gaps = 1/445 (0%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y + ++C + L R +HG +VSGLG D++ ++ LV Y+ L+ A ++FDG+
Sbjct: 65 YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMP 124
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
++ L N +I +A G + ++QL+ M+ G PD +T + L G+
Sbjct: 125 KRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGRE 184
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H L + + +V + LV MYA+C C++ A VF+ + D V W+++I Y Q G
Sbjct: 185 VHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGR 244
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+AL R + G + S ++AAA +A + G +HG+ + GF+ + ++
Sbjct: 245 PMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTS 304
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI-IEKGLNP 405
LVDMY+K G++ + +FE + +R ++++N++I G G+HG +A + F + +E + P
Sbjct: 305 LVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTP 364
Query: 406 DESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
D TF +L AC HGG+V + +E F M + Y I+ +H+ +V +LG AG EEAY
Sbjct: 365 DNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEAYDL 424
Query: 466 IWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRW 525
I +P D + GALL+ C I+ N +L E+ +L E +P V+LSN YA+ G+W
Sbjct: 425 IKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQSGKW 484
Query: 526 DDVMKLRDDIVDNGLRKEAGVSWVS 550
+ ++R + + GL+K G SW+
Sbjct: 485 EKAARVRKLMTNRGLKKIIGCSWIE 509
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 196/410 (47%), Gaps = 34/410 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + +SL ++LH + + L D ATKLV LYA ++ AR LFD P+R+
Sbjct: 68 VLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGMPKRN 127
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
VFLWN +IRAYA A L++ ++ ++PDNFTY +AC+ DL R VH
Sbjct: 128 VFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGREVHE 187
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ + G D + LV Y+K +D+A VFD + D V+ NSMI+ + G +
Sbjct: 188 RVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPME 247
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L L M G P TLV IS + + L G+ +HGF + FD D + + LV
Sbjct: 248 ALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVD 307
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPV 307
MYA+ + A +F L +LV+W+A+I GY G + +AL F K+ ++ + D +
Sbjct: 308 MYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNI 367
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
VL+A HG +++ E + GL + V+
Sbjct: 368 TFVGVLSACN-----------HGGMVKEAKE-----------------FFGLMVDVYSI- 398
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ + + ++ LG G +A++ + + + PD + ALL C
Sbjct: 399 -KPTVQHFTCLVDVLGHAGRFEEAYDLIKGM---PMQPDSGIWGALLNGC 444
>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 631
Score = 265 bits (676), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 247/467 (52%), Gaps = 9/467 (1%)
Query: 92 FKNLLRTQLKPDNFT--------YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
F L Q K D+F YA + +C L + +H G+ + ++
Sbjct: 38 FATQLIPQHKVDSFPSSPSNHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLAT 97
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
LV YS + + A +FD + +L L N +I +A G + ++ L+ ML G P
Sbjct: 98 KLVNFYSVCNSLRNAHHLFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKP 157
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D +TL ++ S + G+ IH ++S ++ +V + LV MYA+C C+ A HVF
Sbjct: 158 DNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVF 217
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + D V W++++ Y+Q G ++L ++ +G + + +V++++A A +
Sbjct: 218 DKIVDRDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLP 277
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G IHG+ +HGF+ + V +AL+DMY+KCG + + +FE + E+ ++++N++I G
Sbjct: 278 HGREIHGFGWRHGFQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYA 337
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+HG +A + F ++++ PD TF L AC G L+++GR ++ M + I
Sbjct: 338 MHGLAVEALDLFERMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTV 396
Query: 444 EHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFE 503
EHY MV LLG G L+EAY I + D V GALL+ C +GN +LAE+ +L E
Sbjct: 397 EHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIE 456
Query: 504 NDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+P V+L+N YA+ G+W+ V +LR ++D G++K SW+
Sbjct: 457 LEPDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGIKKNIACSWIE 503
Score = 198 bits (503), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 135/404 (33%), Positives = 208/404 (51%), Gaps = 9/404 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+LE S ++L K+LHA + + + + ATKLV Y++ N L +A LFDK P+ +
Sbjct: 64 LLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKIPKGN 123
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+FLWN +IRAYA A SL+ +L LKPDNFT + +ACS S + R +H
Sbjct: 124 LFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHE 183
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I SG RD +ALV Y+K + +A VFD + D D VL NSM++ +A G D+
Sbjct: 184 RVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSMLAAYAQNGHPDE 243
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
SL L M G P E TLV +IS + + L G+ IHGF + F D V + L+
Sbjct: 244 SLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKVKTALID 303
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A +F L +V+W+A+ITGY+ G +AL F ++ M+ + D +
Sbjct: 304 MYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERM-MKEAQPDHIT 362
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQH-GFELSVMVSSALVDMYSKCGYLGLG---IQVF 364
LAA ++ + G ++ +++ +V + +VD+ CG L I+
Sbjct: 363 FVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQLDEAYDLIRQM 422
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
+ M + + + +++ HG A +IE L PD+S
Sbjct: 423 DVMPDSGV--WGALLNSCKTHGNVELAEVALEKLIE--LEPDDS 462
>gi|224083626|ref|XP_002307076.1| predicted protein [Populus trichocarpa]
gi|222856525|gb|EEE94072.1| predicted protein [Populus trichocarpa]
Length = 733
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 173/592 (29%), Positives = 287/592 (48%), Gaps = 65/592 (10%)
Query: 19 LSRTKELHALVAKASLL-RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L K +H LV+K+ L + + V +YA V+ A ++FD+ R V W +++
Sbjct: 146 LEEGKYIHGLVSKSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVI 205
Query: 78 AYALAHRFNDAKSL-----FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
Y H + K L + + K ++ T +AC + R +HG A+
Sbjct: 206 GYV--HNDDSEKGLECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVK 263
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
+GLG + S+L++ YSK ++EA F V D D+ S+I A GF ++ L L
Sbjct: 264 TGLGCSQVVQSSLLSMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNL 323
Query: 193 FDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
F W +++ PD + ++ G ++ G+ HG ++ ++ D V++ L+SMY
Sbjct: 324 F-WDMQVDDVYPDGIVVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYC 382
Query: 252 RCNCMNSAYHVF-----------------------------------NSLF--------- 267
+ +N A +F NSL
Sbjct: 383 KFGTLNPAEKLFDGVHEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNL 442
Query: 268 ----------HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
D+VTW+ LI+ Y+ G Y +A+ F ++ + + + VL+A
Sbjct: 443 SIAWKMFCRTQRDVVTWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACC 502
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G ++H Y+ + GFEL+V + +ALVDMY+KCG L ++F +M E+++I++N
Sbjct: 503 HLPSLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNV 562
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G GLHG A E F+ + + + P+ TF +LL AC H G V++G+++F RM + Y
Sbjct: 563 MISGYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACTHAGYVDEGKQLFDRM-QYY 621
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
I+ +H+ M LLG +GNL+EA + S+P D V G LLS C I+ ++ V
Sbjct: 622 SIKPNLKHFACMADLLGRSGNLQEAEDLVQSMPICPDGGVWGTLLSACKIHNEIEIGIRV 681
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A E+DP Y +MLSN Y G+WD+ + R+ + + G+ K AG S V
Sbjct: 682 AKCAIESDPENDGYYIMLSNMYGSMGKWDEAERARELMKERGIGKRAGWSAV 733
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 129/557 (23%), Positives = 243/557 (43%), Gaps = 60/557 (10%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
LS Q+L + HAL+ + F ++KL+ LYA S+ +FD T Q+ FL
Sbjct: 38 LSNQTQTLQSLHKSHALIITTGNANNVFISSKLISLYASFRKPHSSTYVFDSTNQKDTFL 97
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WNSII+++ + A + + P+ FT I C+E L +++HG
Sbjct: 98 WNSIIKSHFSNGNYFKAFDFYIQMRYDNTPPNQFTIPMIVATCAELLWLEEGKYIHGLVS 157
Query: 132 VSGL-GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
SGL +S S+ V Y+K ++++A +FD + D+V +++ G+ H +K L
Sbjct: 158 KSGLFAENSAVGSSFVYMYAKCGVMEDASLMFDEIVVRDVVSWTALVIGYVHNDDSEKGL 217
Query: 191 QLFDWMLRLG---KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ M R+G + + TL G + G+ +HG +K+ V S L+
Sbjct: 218 ECLCEMRRIGGDGEKVNSRTLEGGFQACGNLGAMIAGRCLHGLAVKTGLGCSQVVQSSLL 277
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
SMY++C + A++ F + D+ +W+++I ++ G + L F + + D +
Sbjct: 278 SMYSKCGNVEEAHNSFCQVVDKDVFSWTSVIGVCARFGFMNECLNLFWDMQVDDVYPDGI 337
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+++ +L S V G HG +++ + L V++AL+ MY K G L ++F+ +
Sbjct: 338 VVSCILLGFGNSMMVREGKAFHGLIVRRNYVLDDTVNNALLSMYCKFGTLNPAEKLFDGV 397
Query: 368 SERNIITYNSVILG------------------------LGLHGFTYQAFEFF----RDI- 398
E + ++N+++ G G G A++ F RD+
Sbjct: 398 HEWSKESWNTMVFGYVHCYIIKNSVDEDVSIANSLIDMYGKGGNLSIAWKMFCRTQRDVV 457
Query: 399 -------------------------IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
I + LNP+ +T +L ACCH + G+ + +
Sbjct: 458 TWNTLISSYTHSGHYAEAITLFDEMISEKLNPNSATLVIVLSACCHLPSLEKGKMVH-QY 516
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+E G + +V + G LE++ S+ K D ++S ++G+++
Sbjct: 517 IKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSM-KEKDVISWNVMISGYGLHGDANS 575
Query: 494 AEIVAHQLFENDPRKGA 510
A V Q+ +++ + A
Sbjct: 576 AMEVFQQMEQSNVKPNA 592
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL + K +H + + + T LV +YA L +R LF+ ++ V WN +I
Sbjct: 506 SLEKGKMVHQYIKEGGFELNVSLGTALVDMYAKCGQLEQSRELFNSMKEKDVISWNVMIS 565
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y L N A +F+ + ++ +KP+ T+ + AC+
Sbjct: 566 GYGLHGDANSAMEVFQQMEQSNVKPNAITFLSLLSACT 603
>gi|222631052|gb|EEE63184.1| hypothetical protein OsJ_17993 [Oryza sativa Japonica Group]
Length = 746
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 261/487 (53%), Gaps = 3/487 (0%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ F +N IR +A + R + + LF ++LR+ ++PD++T + A + R H
Sbjct: 117 TAFSYNVAIRFFA-SSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAH 175
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
GL T +L+T YS L A KVFDG+ D+V N+M+ + G
Sbjct: 176 ALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNG 235
Query: 188 KSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ ++F M++ G P+ T+ +++ + L +G+ + + + + V S L
Sbjct: 236 EVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSAL 295
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY +C + A VF+++ D+V W+A+ITGY+Q G +A+ F + + G + D
Sbjct: 296 LGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDK 355
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ +A VL+A + + G+ + GY + G +V V +ALVDMY+KCG L I+VF
Sbjct: 356 ITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRK 415
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHGGLVND 425
M +N+ ++N++I GL +G +A + F+ + E+GL PD+ TF +L AC H GLV D
Sbjct: 416 MPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKD 475
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G+ F +T E+ I K EHY MV LL +G+LEEA+ FI +P VD + GALL+ C
Sbjct: 476 GKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
N ++ E V +++ + +P V+ S YA R DD K+R + + G+ K G
Sbjct: 536 RKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPG 595
Query: 546 VSWVSGS 552
SWV S
Sbjct: 596 CSWVEVS 602
>gi|357487403|ref|XP_003613989.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
gi|355515324|gb|AES96947.1| hypothetical protein MTR_5g043450 [Medicago truncatula]
Length = 828
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 161/532 (30%), Positives = 272/532 (51%), Gaps = 2/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K +H V + ++ D + L+ +Y+ L A+ LF+ RS W S+I A
Sbjct: 219 LRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISA 278
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y F +A +F + ++++P++ T + +C+ L + VH + + +G
Sbjct: 279 YNQNECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVT 338
Query: 139 SIT-SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ AL+ YS + K+ + + ++V N++IS +A G D+++ F M+
Sbjct: 339 GLDLGPALIDFYSACWKMSSCEKLLHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMV 398
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G PD ++L IS + GQ IHG +K F ++V + L+ MY++C +
Sbjct: 399 AKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGFFD-EFVQNSLMDMYSKCGFAS 457
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
SAY +FN + H +V W+ +I G+SQ G +AL F ++ + + V S + A +
Sbjct: 458 SAYTIFNKIKHKSIVAWNCMICGFSQNGISVEALSLFDEMFKNRLEINKVTFLSAIQACS 517
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G IH +I G + + + +ALVDMY+KCG L +VF+++ E++++++++
Sbjct: 518 NLGYLDKGKWIHHKIIVTGNQNDLYIDTALVDMYAKCGDLQTAQKVFDSIVEKSVVSWST 577
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G+HG A F ++ + P+E TF +L AC H G V +G+ F M + Y
Sbjct: 578 MIAAHGIHGQINAATSLFHKMVLSNIKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYY 637
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI EH+ +V LL AG++ AY I S+ PV ++ GALL+ C IYG D+ E +
Sbjct: 638 GIVPNVEHFASIVDLLSRAGDINGAYEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYI 697
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +L Y +LSN YAE G W + K+R + GL+K G S V
Sbjct: 698 AEELGGISTDDTGYYTLLSNIYAEGGNWYESRKVRSKMEGMGLKKVPGYSTV 749
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 204/403 (50%), Gaps = 4/403 (0%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L + L ++ +L R +LHA + SL +P +TKL+ Y+ L S+R++F P
Sbjct: 3 LYMPLFRTCSTLRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHPSP 62
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDN---FTYACITRACSENSDLPGLR 124
F+++ +I+ + H F + SLF + ++ K F Y + RA + +L R
Sbjct: 63 DSFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVGELIVGR 122
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG + SG D + ++LV Y +L + +A KVFD + DLVL +S+IS + G
Sbjct: 123 KLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSSIISCYVENG 182
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+ + L++F M+ G PD L+ + + L + + +HG+ ++ +S+
Sbjct: 183 VYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSN 242
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
L+ MY++C + A +F + W+++I+ Y+Q + +AL F K+ +
Sbjct: 243 SLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEP 302
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQV 363
+ V + SVL + A+ + G +H +V+++ ++ + + AL+D YS C + ++
Sbjct: 303 NDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDLGPALIDFYSACWKMSSCEKL 362
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
++ NI+++N++I G +A FF ++ KG+ PD
Sbjct: 363 LHSIGNENIVSWNTLISFYAREGLNDEAMAFFACMVAKGIMPD 405
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 164/333 (49%), Gaps = 20/333 (6%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y + R CS L L +H +V+ L + + S+ L+ +YS++ + + VF
Sbjct: 4 YMPLFRTCST---LRRLTQLHAHLVVTSLHNNPLASTKLLESYSQMGSLQSSRLVFYTHP 60
Query: 167 DPDLVLCNSMISGFAHCGFWD----KSLQLFDWMLRLGKTPDEY------TLVGLISGLW 216
PD + M S C W+ + L LF+ +++G + +++ ++G+
Sbjct: 61 SPD----SFMFSVLIKCHLWNHLFREVLSLFNHHIQMGSKLTQNCAFLYPSVIRAVTGVG 116
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
E L VG+ +HG LKS F + + LV MY + A VF+ + DLV WS+
Sbjct: 117 E---LIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMCVRDLVLWSS 173
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+I+ Y + G Y + L FR + +G + D V++ SV A K + +HGYV++ G
Sbjct: 174 IISCYVENGVYREGLEMFRSMICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREG 233
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+S++L+ MYS+CGYL ++FE + +R+ + S+I + +A + F
Sbjct: 234 MVGDGSLSNSLIVMYSQCGYLCRAKRLFECIDDRSTSCWTSMISAYNQNECFEEALDVFI 293
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ + + P++ T ++L +C G + +G+ +
Sbjct: 294 KMQDSEVEPNDVTMISVLNSCARLGRLKEGKSV 326
>gi|225427963|ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
[Vitis vinifera]
Length = 612
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 162/552 (29%), Positives = 276/552 (50%), Gaps = 65/552 (11%)
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R L +I++ ++ N+A S +NL R L+ D+ T A + + C+++ L
Sbjct: 19 RKPRRRPCLVEAIVK-LCKKNKLNEAVSSLENLARRGLRLDSRTLASLLQHCADSRALRE 77
Query: 123 LRFVHGGAIVSGLGR--------------------------DSITSSAL------VTAYS 150
+ VH ++GL R D +++ L ++ Y+
Sbjct: 78 GKRVHLHLKLTGLKRPGTFLSNHLINMYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYA 137
Query: 151 KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
KL +I A K+FD + + D+V N+M+ A CG+WD++L+ + +LG + ++ G
Sbjct: 138 KLGMIKPARKLFDKMPEKDVVSWNTMVIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAG 197
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
+++ + + + + +HG L + F S +SS ++ Y +C M A +F+ + D
Sbjct: 198 VLTVCVKLKEVGLTRQVHGQILVAGFLSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARD 257
Query: 271 L-------------------------------VTWSALITGYSQQGDYGKALYYFRKLNM 299
+ V+W+ALI+GY++ G KAL F K+ +
Sbjct: 258 VLAWTTMVSGYAKWGDMKSANELFVEMPEKNPVSWTALISGYARNGMGHKALELFTKMML 317
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+ D +S L A A A++ G IH Y+++ F+ + +V SAL+DMYSKCG LG+
Sbjct: 318 FHVRPDQFTFSSCLCACASIASLKHGKQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGI 377
Query: 360 GIQVFETMSER-NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
G +VF+ M + +++ +N++I L HG +A + D++ G PD+ TF +L AC
Sbjct: 378 GRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNACS 437
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
H GLV G F M+ +YGI EHY ++ LLG AG EE + +P D V
Sbjct: 438 HSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAGCFEEVMDQLEKMPYKPDDRVW 497
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
ALL C I+G+ +L A +L E +P+ V+LS+ YA GRW+ V K+R + +
Sbjct: 498 NALLGVCRIHGHIELGRKAAERLIELEPQSSTAYVLLSSIYAVLGRWESVQKVRQLMNER 557
Query: 539 GLRKEAGVSWVS 550
++KE +SW+
Sbjct: 558 QVKKERAISWLE 569
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 193/458 (42%), Gaps = 86/458 (18%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVL---------PSARILFDKTPQRSVFLWNSI 75
++A K R F LY+ NN+L AR LFDK P++ V WN++
Sbjct: 104 MYAKCGKEVEARKVFDKMSARNLYSWNNMLSGYAKLGMIKPARKLFDKMPEKDVVSWNTM 163
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ A+A +++A + + ++ + F++A + C + ++ R VHG +V+G
Sbjct: 164 VIAHAQCGYWDEALRFYSEFRQLGIQCNGFSFAGVLTVCVKLKEVGLTRQVHGQILVAGF 223
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM------------------- 176
+ + SS+++ AY K L+ +A K+FD +S D++ +M
Sbjct: 224 LSNVVLSSSVLDAYVKCGLMGDARKLFDEMSARDVLAWTTMVSGYAKWGDMKSANELFVE 283
Query: 177 ------------ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
ISG+A G K+L+LF M+ PD++T + + L G
Sbjct: 284 MPEKNPVSWTALISGYARNGMGHKALELFTKMMLFHVRPDQFTFSSCLCACASIASLKHG 343
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQ 283
+ IH + L+ +F V S L+ MY++C + VF+ + + D+V W+ +I+ +Q
Sbjct: 344 KQIHAYLLRINFQPNTIVVSALIDMYSKCGSLGIGRKVFDLMGNKLDVVLWNTIISALAQ 403
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G +A+ + G K D + +L A + S
Sbjct: 404 HGCGEEAIQMLDDMVRSGAKPDKITFVVILNACSHS------------------------ 439
Query: 344 SSALVDMYSKCGYLGLGIQVFETMS-ERNIIT----YNSVILGLGLHGFTYQAFEFFRDI 398
G + G+ FE+MS + I+ Y +I LG G FE D
Sbjct: 440 -----------GLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAG----CFEEVMDQ 484
Query: 399 IEK-GLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+EK PD+ ++ALL C G + GR+ R+ E
Sbjct: 485 LEKMPYKPDDRVWNALLGVCRIHGHIELGRKAAERLIE 522
>gi|218196522|gb|EEC78949.1| hypothetical protein OsI_19398 [Oryza sativa Indica Group]
Length = 746
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 261/487 (53%), Gaps = 3/487 (0%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ F +N IR +A + R + + LF ++LR+ ++PD++T + A + R H
Sbjct: 117 TAFSYNVAIRFFA-SSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAH 175
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
GL T +L+T YS L A KVFDG+ D+V N+M+ + G
Sbjct: 176 ALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNG 235
Query: 188 KSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ ++F M++ G P+ T+ +++ + L +G+ + + + + V S L
Sbjct: 236 EVGRMFRDMVKEGTVAPNAVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSAL 295
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY +C + A VF+++ D+V W+A+ITGY+Q G +A+ F + + G + D
Sbjct: 296 LGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDK 355
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ +A VL+A + + G+ + GY + G +V V +ALVDMY+KCG L I+VF
Sbjct: 356 ITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRK 415
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHGGLVND 425
M +N+ ++N++I GL +G +A + F+ + E+GL PD+ TF +L AC H GLV D
Sbjct: 416 MPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKD 475
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G+ F +T E+ I K EHY MV LL +G+LEEA+ FI +P VD + GALL+ C
Sbjct: 476 GKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
N ++ E V +++ + +P V+ S YA R DD K+R + + G+ K G
Sbjct: 536 RKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPG 595
Query: 546 VSWVSGS 552
SWV S
Sbjct: 596 CSWVEVS 602
>gi|357441891|ref|XP_003591223.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480271|gb|AES61474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 606
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 154/510 (30%), Positives = 257/510 (50%), Gaps = 3/510 (0%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
T L++ Y A LFD+ P R V W S+I Y + + A ++F N+LR +K
Sbjct: 45 TDLIKSYFDKGSFEEAHTLFDEMPHRDVIAWTSMITGYTSCNHHSRAWNVFTNMLRDGVK 104
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI-TSSALVTAYSKL-SLIDEAI 159
P+ FT + + +AC L + VHG AI G SI +AL+ Y+ +D A
Sbjct: 105 PNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATCCDSMDNAR 164
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
VF+ + + V ++I+G+ H L++F M ++ +S
Sbjct: 165 LVFEDIGTKNAVSWTTLITGYTHRRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIG 224
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
++G+ +H + F+S V + ++ MY RC C + A +F + D +TW+ LI
Sbjct: 225 SSNLGKQVHAAVINHGFESNLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIA 284
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G+ Y ++L F ++ +G + SV+AA A A ++ G +HG +I G +
Sbjct: 285 GFETLDSY-ESLCIFSQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDN 343
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
++ +S+AL+DMY+KCG + ++F M N++++ S+++G G HG +A + F +++
Sbjct: 344 NLELSNALIDMYAKCGNVADSHKIFSGMRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMV 403
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+ PD+ F A+L AC H GLV++G F MT Y + + Y +V LL AG +
Sbjct: 404 GSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRV 463
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
+EAY I ++P D ++ ALL C Y + ++ A ++ E P K V+LSN
Sbjct: 464 KEAYELIENMPFKPDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFS 523
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +G W D LR + +KE G SW+
Sbjct: 524 AAEGNWADFASLRKLMRSTKSKKEVGRSWI 553
>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g68930-like [Brachypodium distachyon]
Length = 750
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 167/593 (28%), Positives = 279/593 (47%), Gaps = 65/593 (10%)
Query: 22 TKELHALVAKASLLRDPFYA-TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
T +HAL+ + P Y L+ YA + +LP AR +FD P R++ NS++ A A
Sbjct: 29 TAAVHALILRTLPHPSPTYLLNTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALA 88
Query: 81 LAHRFNDAKSLFKNL-------------------------------LRTQ--LKPDNFTY 107
A D + LF +L LR + ++P T
Sbjct: 89 RAGLVRDMERLFTSLPQRDAVSYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITM 148
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
+ + S D R VH + G G + T S LV Y+K+ I +A +VFD +
Sbjct: 149 SGVVMVASALGDRALGRQVHCQILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEG 208
Query: 168 PDLVLCNSMISGFAHC-------------------------------GFWDKSLQLFDWM 196
++V+CN+MI+G C G ++L +F M
Sbjct: 209 KNVVMCNTMITGLLRCKMVAEARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRM 268
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G D+YT +++ + L G+ IH + ++ ++ +V S LV MY++C +
Sbjct: 269 RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSV 328
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF + ++++W+A+I GY Q G +A+ F ++ G K D + SV+++
Sbjct: 329 RLAEAVFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSC 388
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A A++ GA H + G V VS+ALV +Y KCG + ++F+ MS + +++
Sbjct: 389 ANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWT 448
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
++++G G + + F ++ KG+ PD TF +L AC GLV+ GR F M ++
Sbjct: 449 ALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQD 508
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEI 496
+ I +HY M+ L +G L++A FI +P+ D LLS C + G+ ++ +
Sbjct: 509 HDIVPLDDHYTCMIDLYSRSGWLKQAEEFIKQMPRCPDAFGWATLLSACRLRGDMEIGKW 568
Query: 497 VAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A L + DP+ A V+L + +A G W+DV KLR + D ++KE G SW+
Sbjct: 569 AAENLLKLDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWI 621
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 126/271 (46%), Gaps = 2/271 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++HA + + + F + LV +Y+ + A +F + +++ W ++I
Sbjct: 292 ALEEGKQIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIV 351
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y +A +F + R +KPD+FT + +C+ + L H A+VSGL
Sbjct: 352 GYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRP 411
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S+ALVT Y K I++A ++FD +S D V +++ G+A G +++ LF+ ML
Sbjct: 412 YVTVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKML 471
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G PD T +G++S L+ G+ H D + ++ +Y+R +
Sbjct: 472 SKGVKPDGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWL 531
Query: 257 NSAYHVFNSLFH-PDLVTWSALITGYSQQGD 286
A + PD W+ L++ +GD
Sbjct: 532 KQAEEFIKQMPRCPDAFGWATLLSACRLRGD 562
>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 264 bits (675), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 161/543 (29%), Positives = 257/543 (47%), Gaps = 68/543 (12%)
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I+ ++ + F +F +L + PD+ + + C+ S L + +H A+VSGL
Sbjct: 46 IQIFSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGL 105
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP--------------------------- 168
G DS+ S+L+ Y + + +A VFD + P
Sbjct: 106 GLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQ 165
Query: 169 --------DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
+LV N MISGF G + ++ +F M G PD ++ ++ + + +
Sbjct: 166 TRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDM 225
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL--------- 271
+G IH + +K +V S L+ MY +C C + VFN + D+
Sbjct: 226 PLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTG 285
Query: 272 ------------------------VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
V+W+++I SQ G +AL FR++ ++G K + V
Sbjct: 286 LSRNGLVDNALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSV 345
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
I +L A A + G H + +++G V V SAL+DMY+KCG + F+ M
Sbjct: 346 TIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMM 405
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
RN++++NS++ G +HG T++A F + G PD +F+ +L AC GGL +G
Sbjct: 406 PNRNLVSWNSLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGW 465
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M+ +G++A+ EHY MV LLG +G LEEAY+ I +P D V GALLS C +
Sbjct: 466 FYFDSMSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRV 525
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ DL EI A ++FE +PR ++LSN YA W +V +RD + GL+K G S
Sbjct: 526 HNRVDLGEIAAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYS 585
Query: 548 WVS 550
W+
Sbjct: 586 WIE 588
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 47/331 (14%)
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
G+S P+ + S ++ F H +++F +ML G PD L +I S L
Sbjct: 39 GISLPETIQIFSKLNHFGHV------IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQT 92
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL------ 277
G+ +H F L S V S L+ MY + + + A +VF+ L P +VT SAL
Sbjct: 93 GKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFAR 152
Query: 278 -----------------------------ITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
I+G+++ G Y A+ F+ ++++G K D
Sbjct: 153 KGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTS 212
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
++SVL A G IH YVI+ G V SAL+DMY KC VF M
Sbjct: 213 VSSVLPAVGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMD 272
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
E ++ N+++ GL +G A E F+ KG++ + ++++++ +C G + E
Sbjct: 273 EVDVGACNALVTGLSRNGLVDNALEVFKQF--KGMDLNVVSWTSMIASCSQNGKDMEALE 330
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
+F M I+ + + + LL GN+
Sbjct: 331 LFREMQ----IEGVKPNSVTIPCLLPACGNI 357
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 99/420 (23%), Positives = 173/420 (41%), Gaps = 73/420 (17%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ + +L K++H + L D + L+ +Y + L AR +FDK PQ
Sbjct: 80 VIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPG 139
Query: 69 VFL-----------------------------------WNSIIRAYALAHRFNDAKSLFK 93
V WN +I + + + DA +F+
Sbjct: 140 VVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQ 199
Query: 94 NLLRTQLKPDNFTYACITRACSENSDLP--GLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
N+ LKPD + + + A + D+P G++ +H I GLG D SAL+ Y K
Sbjct: 200 NMHLEGLKPDGTSVSSVLPAVGD-LDMPLMGIQ-IHCYVIKQGLGPDKFVVSALIDMYGK 257
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD------------------------ 187
+ E VF+ + + D+ CN++++G + G D
Sbjct: 258 CACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVFKQFKGMDLNVVSWTSMIA 317
Query: 188 ---------KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
++L+LF M G P+ T+ L+ + L G+ H F L++ +
Sbjct: 318 SCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFN 377
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
YV S L+ MYA+C M ++ F+ + + +LV+W++L+ GY+ G +A+ F +
Sbjct: 378 DVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEAINIFELMQ 437
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYL 357
G+K D V VL+A + G + + HG E + S +V + + G L
Sbjct: 438 RCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGRSGRL 497
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 14/220 (6%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W S+I + + + +A LF+ + +KP++ T C+ AC + L + H
Sbjct: 308 NVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAH 367
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
++ +G+ D SAL+ Y+K + + FD + + +LV NS+++G+A G
Sbjct: 368 CFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTF 427
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG-------QGIHGFCLKSSFDSYD 240
+++ +F+ M R G+ PD + ++S + L G HG +++ + Y
Sbjct: 428 EAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHG--VEARMEHY- 484
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
S +V++ R + AY + + F PD W AL++
Sbjct: 485 ---SCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLS 521
>gi|449453035|ref|XP_004144264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g69350, mitochondrial-like [Cucumis sativus]
Length = 804
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 278/532 (52%), Gaps = 3/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K H + K + D F + L+ +YA L SA I+F+ RS W ++I +
Sbjct: 216 LRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISS 275
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y L +A +LF ++ +T+++P++ T I R+C+ S L + VH I + L +
Sbjct: 276 YNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDAN 335
Query: 139 -SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
L+ Y+ + D K+ + + + N++IS +A G +++ LF M
Sbjct: 336 LDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQ 395
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G PD ++L +S L +G IHG +K F +YV + L++MY++C ++
Sbjct: 396 KQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMD-EYVFNSLINMYSKCGYVD 454
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY +F+ + +VTW+++I+G SQ G KA+ F + + + V SV+ A +
Sbjct: 455 LAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACS 514
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G IH +I G + + +ALVDMY+KCG L +VF+ MSER++++++S
Sbjct: 515 HLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSS 574
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G+HG + F ++E G+ P++ T +L AC H G V +G F M ++
Sbjct: 575 LISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDF 633
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI+ K EH++ +V LL AG+L+EAY I +P P ++ GALL+ C I+ D+A+ +
Sbjct: 634 GIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNI 693
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L+ + +LSN YA G W++ ++R + GL+K S V
Sbjct: 694 QRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVV 745
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 203/402 (50%), Gaps = 5/402 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L + L K+ +L +LHA + +L DP +TKL+ Y+ L S+ +F
Sbjct: 3 LYMPLFKASTTLRTLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSP 62
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
F+W +++++ + +A SL+ +L Q++ +++T+ + RACS DL + VH
Sbjct: 63 DSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVH 122
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G I SG D + ++AL++ Y +L +D A KVF + DLV +S+IS G +
Sbjct: 123 GRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEIN 182
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ L F M+ G TPD ++ ++ E +L + + HG+ LK ++ +V S L+
Sbjct: 183 EGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLI 242
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP- 306
MYA+C + SA VF ++ + TW+A+I+ Y+ G +AL F ++MQ + +P
Sbjct: 243 FMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALF--VSMQKTEVEPN 300
Query: 307 -VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV-MVSSALVDMYSKCGYLGLGIQVF 364
V + +L + + + G +H VI++ + ++ + L+++Y+ L ++
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKIL 360
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
+ R I +N++I G + + F + ++G PD
Sbjct: 361 HEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPD 402
>gi|15234184|ref|NP_193657.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|2828297|emb|CAA16711.1| putative protein [Arabidopsis thaliana]
gi|7268717|emb|CAB78924.1| putative protein [Arabidopsis thaliana]
gi|332658761|gb|AEE84161.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 932
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 166/511 (32%), Positives = 268/511 (52%), Gaps = 27/511 (5%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
++ +Y + A +LF T R + WNS+I A++ + AK+LFK ++ ++
Sbjct: 435 VIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVV-SEYSCS 493
Query: 104 NF---TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
F T I +C + L + VH + LG L +A+ +L + E
Sbjct: 494 KFSLSTVLAILTSCDSSDSLIFGKSVH--CWLQKLGD-------LTSAFLRLETMSET-- 542
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPS 219
DL NS+ISG A G +SL+ F M R GK D TL+G IS
Sbjct: 543 -------RDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLG 595
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
L+ G+ HG +KS + + + L++MY RC + SA VF + P+L +W+ +I+
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
SQ + FR L ++ + + +L+A+ + + G H ++I+ GF+
Sbjct: 656 ALSQNKAGREVFQLFRNLKLE---PNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA 712
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ VS+ALVDMYS CG L G++VF +I +NSVI G HG +A E F+++
Sbjct: 713 NPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELS 772
Query: 400 EKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ P++S+F +LL AC H G +++G + +M E++G++ TEH +++V +LG AG
Sbjct: 773 SNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGK 832
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
L EAY FI + +P V GALLS C+ +G++ L + VA LFE +P +Y + L+NT
Sbjct: 833 LREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANT 892
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y G W++ ++LR + DN L+K G S +
Sbjct: 893 YVGLGGWEEAVRLRKMVEDNALKKLPGYSVI 923
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 189/383 (49%), Gaps = 4/383 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H K LL+D ++KL+ Y L S+ LFD+ ++ V +WNS+I A
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R+ A LF ++ + D+ T A S +H AI +GL DS
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K + A VF + D+V N++++ G KSLQ F M G+
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYARCNCMNSAY 260
D T +IS L++G+ +HG +KS + +VS + ++SMY++C +A
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKS 319
VF L D+++ +A++ G++ G + +A ++ K + D + S+ +
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDL 406
Query: 320 ANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +HGY ++ + + V ++++DMY KCG +F+T + R+++++NS+
Sbjct: 407 SFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSM 466
Query: 379 ILGLGLHGFTYQAFEFFRDIIEK 401
I +GFT++A F++++ +
Sbjct: 467 ISAFSQNGFTHKAKNLFKEVVSE 489
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 158/310 (50%), Gaps = 5/310 (1%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R VH A+ GL +D TSS L+T Y + + + +FD + + D+++ NSMI+
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G + ++ LF M+ G D TL+ S L L +H +++ +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLC 226
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L+++YA+ ++SA VF + H D+V+W+ ++T G K+L YF+ + G++
Sbjct: 227 NALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQE 286
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF--ELSVMVSSALVDMYSKCGYLGLGI 361
AD V + V++A + + G +HG VI+ G+ E V V ++++ MYSKCG
Sbjct: 287 ADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAE 346
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI--IEKGLNPDESTFSALLCACCH 419
VFE + R++I+ N+++ G +G +AF + ++K + PD +T ++ C
Sbjct: 347 TVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDK-IQPDIATVVSITSICGD 405
Query: 420 GGLVNDGREI 429
+GR +
Sbjct: 406 LSFSREGRAV 415
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 110/270 (40%), Gaps = 16/270 (5%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
H L K+ D L+ +Y + SA +F ++ WN +I A +
Sbjct: 603 FHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKA 662
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ LF+NL +L+P+ T+ + A ++ S G++ H I G + S+
Sbjct: 663 GREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQ-AHCHLIRRGFQANPFVSA 718
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-T 202
ALV YS +++ +KVF + NS+IS G +K+++LF + +
Sbjct: 719 ALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEME 778
Query: 203 PDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
P++ + + L+S + G Q F +K + ++ V M R +
Sbjct: 779 PNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI----VDMLGRAGKLR 834
Query: 258 SAYHVFNSLFHPDLV-TWSALITGYSQQGD 286
AY + P W AL++ + GD
Sbjct: 835 EAYEFITGIGEPQKAGVWGALLSACNYHGD 864
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 3/107 (2%)
Query: 12 LSKSHQ--SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
LS S Q S S + H + + +PF + LV +Y+ +L + +F + S+
Sbjct: 686 LSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSI 745
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNL-LRTQLKPDNFTYACITRACS 115
WNS+I A+ A LFK L ++++P+ ++ + ACS
Sbjct: 746 SAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACS 792
>gi|449489376|ref|XP_004158293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g69350, mitochondrial-like
[Cucumis sativus]
Length = 804
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 162/532 (30%), Positives = 278/532 (52%), Gaps = 3/532 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L K H + K + D F + L+ +YA L SA I+F+ RS W ++I +
Sbjct: 216 LRLAKSAHGYILKRGIENDRFVDSSLIFMYAKCGSLRSAEIVFENVTYRSTSTWTAMISS 275
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y L +A +LF ++ +T+++P++ T I R+C+ S L + VH I + L +
Sbjct: 276 YNLGGYLKEALALFVSMQKTEVEPNSVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDAN 335
Query: 139 -SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
L+ Y+ + D K+ + + + N++IS +A G +++ LF M
Sbjct: 336 LDCLGPTLLELYAATAKHDLCEKILHEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQ 395
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G PD ++L +S L +G IHG +K F +YV + L++MY++C ++
Sbjct: 396 KQGFMPDSFSLASSLSASGNEGELQLGLQIHGHVIKRPFMD-EYVFNSLINMYSKCGYVD 454
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY +F+ + +VTW+++I+G SQ G KA+ F + + + V SV+ A +
Sbjct: 455 LAYMIFDQMEPKGVVTWNSMISGLSQNGYSTKAISLFDLMYVTCPEIGEVAFVSVIQACS 514
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G IH +I G + + +ALVDMY+KCG L +VF+ MSER++++++S
Sbjct: 515 HLGFLEKGKWIHHKLITCGVRKCIFIETALVDMYAKCGDLQTAQRVFDNMSERSVVSWSS 574
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G+HG + F ++E G+ P++ T +L AC H G V +G F M ++
Sbjct: 575 LISSYGVHGQISEVIFLFSKMLESGIKPNDVTVMNVLSACSHAGCVKEGMLFFNSM-RDF 633
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI+ K EH++ +V LL AG+L+EAY I +P P ++ GALL+ C I+ D+A+ +
Sbjct: 634 GIEPKREHFVCIVDLLSRAGDLDEAYEIIKLMPFPPGASIWGALLNGCRIHQRMDIAKNI 693
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L+ + +LSN YA G W++ ++R + GL+K S V
Sbjct: 694 QRELWNIQTDDTGHYTLLSNIYAAGGEWNEFGEVRSMMKGTGLKKVPAYSVV 745
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 204/402 (50%), Gaps = 5/402 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L + L K+ +L + +LHA + +L DP +TKL+ Y+ L S+ +F
Sbjct: 3 LYMPLFKASTTLRQLAQLHAHIIVTALHNDPLPSTKLIESYSQLGDLQSSTSVFRTFHSP 62
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
F+W +++++ + +A SL+ +L Q++ +++T+ + RACS DL + VH
Sbjct: 63 DSFMWGVLLKSHVWNGCYQEAISLYHQMLSQQIQANSYTFPSVLRACSGFGDLGVGQRVH 122
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
G I SG D + ++AL++ Y +L +D A KVF + DLV +S+IS G +
Sbjct: 123 GRIIKSGFDMDPVVNTALLSVYGELGYLDSARKVFGEMPLRDLVSWSSIISSVVENGEIN 182
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+ L F M+ G TPD ++ ++ E +L + + HG+ LK ++ +V S L+
Sbjct: 183 EGLDAFRCMVSEGGTPDSVLVLTVVEACGELGVLRLAKSAHGYILKRGIENDRFVDSSLI 242
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP- 306
MYA+C + SA VF ++ + TW+A+I+ Y+ G +AL F ++MQ + +P
Sbjct: 243 FMYAKCGSLRSAEIVFENVTYRSTSTWTAMISSYNLGGYLKEALALF--VSMQKTEVEPN 300
Query: 307 -VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV-MVSSALVDMYSKCGYLGLGIQVF 364
V + +L + + + G +H VI++ + ++ + L+++Y+ L ++
Sbjct: 301 SVTMRIILRSCTNLSLLREGKSVHCVVIKNDLDANLDCLGPTLLELYAATAKHDLCEKIL 360
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
+ R I +N++I G + + F + ++G PD
Sbjct: 361 HEIGGRGIAVWNTLISVYAQKGLLKETVDLFVRMQKQGFMPD 402
>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 990
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 164/547 (29%), Positives = 285/547 (52%), Gaps = 8/547 (1%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L + SL+ +++H + K L + L+ +Y AR +FD +
Sbjct: 319 ILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE 378
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GL-- 123
R + WNS+I A +A LF LLR LKPD +T + +A S LP GL
Sbjct: 379 RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASS---LPEGLSL 435
Query: 124 -RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ VH AI DS S+AL+ AYS+ + EA +F+ + DLV N+M++G+
Sbjct: 436 SKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQ 494
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
K+L+LF M + G+ D++TL + ++ G+ +H + +KS +D +V
Sbjct: 495 SHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWV 554
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
SS ++ MY +C M++A F+S+ PD V W+ +I+G + G+ +A + F ++ + G
Sbjct: 555 SSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV 614
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
D IA++ A++ + G IH ++ V ++LVDMY+KCG +
Sbjct: 615 LPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYC 674
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ + NI +N++++GL HG + + F+ + G+ PD+ TF +L AC H GL
Sbjct: 675 LFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGL 734
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V++ + M +YGI+ + EHY + LG AG +++A + I S+ ++ LL
Sbjct: 735 VSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLL 794
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
+ C + G+++ + VA +L E +P + V+LSN YA +WD++ R + + ++K
Sbjct: 795 AACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKK 854
Query: 543 EAGVSWV 549
+ G SW+
Sbjct: 855 DPGFSWI 861
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 103/369 (27%), Positives = 183/369 (49%), Gaps = 2/369 (0%)
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
D + + N + Y + +++ F +++ + ++ D T+ + + L
Sbjct: 273 DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLA 332
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ VH A+ GL S++L+ Y KL A VFD +S+ DL+ NS+I+G A
Sbjct: 333 LGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIA 392
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE-PSLLSVGQGIHGFCLKSSFDSYD 240
G +++ LF +LR G PD+YT+ ++ P LS+ + +H +K + S
Sbjct: 393 QNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDS 452
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+VS+ L+ Y+R CM A +F + DLV W+A++ GY+Q D K L F ++ Q
Sbjct: 453 FVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQ 511
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G+++D +A+V + G +H Y I+ G++L + VSS ++DMY KCG +
Sbjct: 512 GERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAA 571
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
F+++ + + + ++I G +G +AF F + G+ PDE T + L A
Sbjct: 572 QFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCL 631
Query: 421 GLVNDGREI 429
+ GR+I
Sbjct: 632 TALEQGRQI 640
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 169/387 (43%), Gaps = 41/387 (10%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA-----LAHRFNDAKSL 91
+ F L+ +Y+ L AR +FDK P R + WNSI+ AYA + A L
Sbjct: 73 ERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 92 FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
F+ L + + T + + + C + + HG A GL D + ALV Y K
Sbjct: 133 FRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLK 192
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT--LV 209
+ E +F+ + D+VL N M+ + GF ++++ L G P+E T L+
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
ISG D + V +A N +S
Sbjct: 253 ARISG-------------------------DDSDAGQVKSFANGNDASSV---------S 278
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
+++ + ++ Y G Y L F + + D V +LA A K ++ G +H
Sbjct: 279 EIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVH 338
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
++ G +L + VS++L++MY K G VF+ MSER++I++NSVI G+ +G
Sbjct: 339 CMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEV 398
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCA 416
+A F ++ GL PD+ T +++L A
Sbjct: 399 EAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/469 (21%), Positives = 201/469 (42%), Gaps = 45/469 (9%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
++ H K L D F A LV +Y + ++LF++ P R V LWN +++AY
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR-FVHGGAIVSGLGRDSI 140
+A L + L P+ T + R ++SD ++ F +G
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGN----------- 272
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
D S +++ N +S + H G + L+ F M+
Sbjct: 273 ----------------------DASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESD 310
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
D+ T + +++ + L++GQ +H LK D VS+ L++MY + A
Sbjct: 311 VECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFAR 370
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK-S 319
VF+++ DL++W+++I G +Q G +A+ F +L G K D + SVL AA+
Sbjct: 371 TVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLP 430
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ +H + I+ VS+AL+D YS+ + +FE + +++ +N+++
Sbjct: 431 EGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHN-FDLVAWNAMM 489
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G ++ + F + ++G D+ T + + C +N G+++ Y I
Sbjct: 490 AGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHA-----YAI 544
Query: 440 QAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
++ + ++ ++ + G++ A S+P P D A + + C
Sbjct: 545 KSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGC 593
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 5/209 (2%)
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
G + S L +G+ H L + ++ + L+SMY++C + A VF+ +
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 270 DLVTWSALITGYSQQGD-----YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
DLV+W++++ Y+Q + +A FR L + ++ +L S VW
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
HGY + G + V+ ALV++Y K G + G +FE M R+++ +N ++
Sbjct: 164 SESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLE 223
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
GF +A + GLNP+E T L
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLL 252
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 5/116 (4%)
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A S+++ G H ++ + + L+ MYSKCG L +VF+ M +R++
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 373 ITYNSVILGLGLHGF-----TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
+++NS++ QAF FR + + + T S +L C H G V
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYV 161
>gi|15226158|ref|NP_180932.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75101013|sp|P93011.1|PP182_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g33760
gi|1707020|gb|AAC69141.1| hypothetical protein [Arabidopsis thaliana]
gi|330253787|gb|AEC08881.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 583
Score = 264 bits (675), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 152/458 (33%), Positives = 242/458 (52%), Gaps = 7/458 (1%)
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ T++ ++ Y I RA + L+ VH IV+G GR + L+T I
Sbjct: 1 MTTKVAANSAAYEAIVRA---GPRVKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAI 57
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+F V PD L NS+I + + + ML +P YT +I
Sbjct: 58 AYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSC 117
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ S L +G+G+H + S F YV + LV+ Y++C M A VF+ + +V W+
Sbjct: 118 ADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWN 177
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+L++G+ Q G +A+ F ++ G + D S+L+A A++ V G+ +H Y+I
Sbjct: 178 SLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISE 237
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G +L+V + +AL+++YS+CG +G +VF+ M E N+ + ++I G HG+ QA E F
Sbjct: 238 GLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELF 297
Query: 396 RDIIEK-GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
+ + G P+ TF A+L AC H GLV +GR ++ RMT+ Y + EH++ MV +LG
Sbjct: 298 NKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLG 357
Query: 455 LAGNLEEAYSFIWSLP---KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
AG L+EAY FI L K PA+ A+L C ++ N DL +A +L +P +
Sbjct: 358 RAGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGH 417
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
VMLSN YA G+ D+V +RD ++ N LRK+ G S +
Sbjct: 418 HVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVI 455
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 172/345 (49%), Gaps = 10/345 (2%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
+ + +++HA + R TKL+ L + +LF P FL+NS+I++
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKS 81
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ + ++ +L + + P N+T+ + ++C++ S L + VH A+VSG G D
Sbjct: 82 TSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLD 141
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ +ALVT YSK ++ A +VFD + + +V NS++SGF G D+++Q+F M
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD T V L+S + +S+G +H + + D + + L+++Y+RC +
Sbjct: 202 SGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGK 261
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIASVLAAAA 317
A VF+ + ++ W+A+I+ Y G +A+ F K+ G + V +VL+A A
Sbjct: 262 AREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACA 321
Query: 318 KSANVWPGAVIH-----GYVIQHGFELSVMVSSALVDMYSKCGYL 357
+ V G ++ Y + G E V +VDM + G+L
Sbjct: 322 HAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFL 362
>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
mitochondrial-like [Glycine max]
Length = 855
Score = 264 bits (674), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 155/530 (29%), Positives = 266/530 (50%), Gaps = 2/530 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LH V K+ L+ +Y + A +F + + W S+I +
Sbjct: 278 RQLHGHVIKSGYDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQL 337
Query: 83 HRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+A LF+++ R +P+ F + + AC + R +HG GLGR+
Sbjct: 338 GYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFA 397
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+L Y+K + AI+ F + PDLV N++I+ F+ G ++++ F M+ G
Sbjct: 398 GCSLCDMYAKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGL 457
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD T + L+ P ++ G IH + +K D V + L++MY +C+ ++ A++
Sbjct: 458 MPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFN 517
Query: 262 VFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
VF + + +LV+W+A+++ Q G+ F+ + K D + I ++L A+ A
Sbjct: 518 VFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELA 577
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G +H + ++ G + V VS+ L+DMY+KCG L VF + +I++++S+I+
Sbjct: 578 SLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIV 637
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G ++A FR + G+ P+E T+ +L AC H GLV +G + M E GI
Sbjct: 638 GYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIP 697
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EH MV LL AG L EA +FI + D + LL+ C +GN D+AE A
Sbjct: 698 PTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAEN 757
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ + DP A V+LSN +A G W +V +LR+ + G++K G SW++
Sbjct: 758 ILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIA 807
Score = 192 bits (488), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 215/463 (46%), Gaps = 9/463 (1%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
S +SL K++H + K++ D ++ +Y L AR FD R+V W
Sbjct: 169 SIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTI 228
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I Y+ + NDA ++ +L++ PD T+ I +AC D+ R +HG I SG
Sbjct: 229 MISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSG 288
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
I +AL++ Y++ I A VF +S DL+ SMI+GF G+ ++L LF
Sbjct: 289 YDHHLIAQNALISMYTRFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFR 348
Query: 195 WMLRLG-KTPDEYTLVGLISG---LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
M R G P+E+ + S L EP G+ IHG C K + L MY
Sbjct: 349 DMFRQGFYQPNEFIFGSVFSACRSLLEPEF---GRQIHGMCAKFGLGRNVFAGCSLCDMY 405
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+ + SA F + PDLV+W+A+I +S GD +A+Y+F ++ G D +
Sbjct: 406 AKFGFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFL 465
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
S+L A + G IH Y+I+ G + V ++L+ MY+KC L VF+ +SE
Sbjct: 466 SLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSEN 525
Query: 371 -NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
N++++N+++ H + F F+ ++ PD T + +L C + G ++
Sbjct: 526 ANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQV 585
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+ + G+ ++ + G+L+ A S P
Sbjct: 586 HC-FSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNP 627
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 197/415 (47%), Gaps = 3/415 (0%)
Query: 73 NSIIRAYALAHRFNDAKSLFK-NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
NS I + +A F + + ++ ++ TY + AC+ L + +H +
Sbjct: 125 NSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHDHIL 184
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
S D + + ++ Y K + +A K FD + ++V MISG++ G + ++
Sbjct: 185 KSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQENDAII 244
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
++ ML+ G PD T +I + +G+ +HG +KS +D + + L+SMY
Sbjct: 245 MYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQNALISMYT 304
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG-KKADPVLIA 310
R + A VF + DL++W+++ITG++Q G +ALY FR + QG + + +
Sbjct: 305 RFGQIVHASDVFTMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQGFYQPNEFIFG 364
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SV +A G IHG + G +V +L DMY+K G+L I+ F +
Sbjct: 365 SVFSACRSLLEPEFGRQIHGMCAKFGLGRNVFAGCSLCDMYAKFGFLPSAIRAFYQIESP 424
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+++++N++I G +A FF ++ GL PD TF +LLCAC +N G +I
Sbjct: 425 DLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIH 484
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
+ + + G+ + ++ + NL +A++ + + + A+LS C
Sbjct: 485 SYII-KIGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSAC 538
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 49/98 (50%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL ++H K+ L+ D + +L+ +YA L AR +F T + W+S+I
Sbjct: 578 SLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIV 637
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
YA ++A +LF+ + ++P+ TY + ACS
Sbjct: 638 GYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACS 675
>gi|15223562|ref|NP_176050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173051|sp|Q9FXA9.1|PPR83_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g56570
gi|9954755|gb|AAG09106.1|AC009323_17 Hypothetical protein [Arabidopsis thaliana]
gi|332195289|gb|AEE33410.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 611
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 264/512 (51%), Gaps = 4/512 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
AT L+ Y ++ AR LFD+ P R V W ++I YA ++ A F +++
Sbjct: 48 ATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGT 107
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL-IDEAI 159
P+ FT + + ++C L VHG + G+ +A++ Y+ S+ ++ A
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAAC 167
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
+F + + V ++I+GF H G L+++ ML Y + +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASID 227
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
++ G+ IH +K F S V + ++ +Y RC ++ A H F+ + DL+TW+ LI+
Sbjct: 228 SVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLIS 287
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
++ D +AL F++ QG + S++AA A A + G +HG + + GF
Sbjct: 288 EL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNK 346
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V +++AL+DMY+KCG + +VF E + RN++++ S+++G G HG+ +A E F +
Sbjct: 347 NVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ G+ PD F A+L AC H GLV G + F M EYGI + Y +V LLG AG
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL-AEIVAHQLFENDPRKGAYKVMLSN 517
+ EAY + +P D + GA+L C + ++ L + + A ++ E P+ VMLS
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSY 526
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA +G+W D ++R + G +KEAG+SW+
Sbjct: 527 IYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 176/324 (54%), Gaps = 3/324 (0%)
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
I ++ L+ +Y + L++EA +FD + D D+V +MI+G+A + ++ + F M++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN-CMNS 258
G +P+E+TL ++ +L+ G +HG +K + YV + +++MYA C+ M +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEA 165
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F + + VTW+ LITG++ GD L ++++ ++ + P I + A+A
Sbjct: 166 ACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASAS 225
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+V G IH VI+ GF+ ++ V ++++D+Y +CGYL F M ++++IT+N++
Sbjct: 226 IDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTL 285
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I L + +A F+ +G P+ TF++L+ AC + +N G+++ R+ G
Sbjct: 286 ISELE-RSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRR-G 343
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEA 462
E ++ + GN+ ++
Sbjct: 344 FNKNVELANALIDMYAKCGNIPDS 367
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 126/276 (45%), Gaps = 8/276 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+ + S S S++ K++HA V K + ++ LY L A+ F + +
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN++I + ++A +F+ P+ +T+ + AC+ + L + +H
Sbjct: 278 DLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLH 336
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFW 186
G G ++ ++AL+ Y+K I ++ +VF + D +LV SM+ G+ G+
Sbjct: 337 GRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYG 396
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS---FDSYDYVS 243
++++LFD M+ G PD + ++S L V +G+ F + S + +
Sbjct: 397 AEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGL--VEKGLKYFNVMESEYGINPDRDIY 454
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ +V + R + AY + + F PD TW A++
Sbjct: 455 NCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAIL 490
>gi|414867547|tpg|DAA46104.1| TPA: hypothetical protein ZEAMMB73_772392 [Zea mays]
Length = 677
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/478 (32%), Positives = 255/478 (53%), Gaps = 2/478 (0%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
WN ++ A++ A A +F+ L + +P++ T+ AC+ DL V A
Sbjct: 76 WNGLLSAHSRAGAPGAALRVFRAL-PSSARPNSTTFTLTLTACARLGDLDAAESVRVRAF 134
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+G G D SAL+ YS+ ++EAI+VFDG+ D V ++M++GF G ++L
Sbjct: 135 AAGYGHDVFVCSALLHLYSRCGAMEEAIRVFDGMPRKDRVAWSTMVAGFVTAGRPVEALA 194
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
++ M G + DE +VG+I +G +HG L+ ++ LVSMYA
Sbjct: 195 MYSRMREHGVSDDEVVMVGVIQACMSTGNARIGASVHGRLLRHCMRMDVVTTTSLVSMYA 254
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+ ++ A VF + + + VTWSALI+G++Q G +AL FR+L G + + S
Sbjct: 255 KNGHLDVACQVFRMMPYRNDVTWSALISGFAQNGRAVEALDLFRELQADGLQPCSWALVS 314
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
L A A + G IHG++++ E ++ +A++DMYSKCG L ++F +S R+
Sbjct: 315 ALLACASVGFLKLGKSIHGFILRR-LEWQCILGTAVLDMYSKCGSLESARKLFNKLSSRD 373
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++ +N++I G HG + A F+++ E G+ PD +TF++LL A H GLV +G+ F
Sbjct: 374 LVLWNAIIACCGTHGCGHDALALFQELNETGIKPDHATFASLLSALSHSGLVEEGKFWFD 433
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
RM +E+GI+ +HY+ +V LL +G +EEA + S+ A+ LLS C
Sbjct: 434 RMIKEFGIEPAEKHYVCIVDLLARSGLVEEANDMLASMQTEPTIAIWVILLSGCLNNKKL 493
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L E +A ++ E P ++SN YA +WD V ++R + D+G +K G S +
Sbjct: 494 ELGETIAKKILELRPEDIGVLALVSNLYAAAKKWDKVREIRKLMKDSGSKKVPGYSLI 551
>gi|357512007|ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355501307|gb|AES82510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 650
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 166/559 (29%), Positives = 278/559 (49%), Gaps = 21/559 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAK--------ASLLRDPFYATKLVRLYALNNVLPSARIL 60
+L L ++L+ +HA + K S F L+ +Y+ +A +
Sbjct: 40 LLTLCGRDRNLTLGSSIHARIIKQPPSFDFDGSQRNALFIWNSLLSMYSKCGEFRNAGNV 99
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FD P R WN++I + F+ + FK + + F A +T S
Sbjct: 100 FDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDKATLTTMLS---GC 156
Query: 121 PGLRF---------VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
GLR +HG V G R+ +AL+T+Y K + KVFD + + ++V
Sbjct: 157 DGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVV 216
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
++ISG A F++ SL+LF M G +P+ T + + +L GQ IHG
Sbjct: 217 TWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGL 276
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
K S + S L+ +Y++C +++A+ +F S D V+ + ++ ++Q G +A
Sbjct: 277 LWKLGMQSDLCIESALMDLYSKCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEEA 336
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
+ F K+ G + D ++++VL + G IH +I+ F + V + LV+M
Sbjct: 337 IQIFTKMVALGMEVDANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLVNM 396
Query: 351 YSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTF 410
YSKCG L + VF M+++N +++NSVI HG ++A +F+ ++ +G+ P + TF
Sbjct: 397 YSKCGDLSDSLLVFYQMTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPTDVTF 456
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+LL AC H GLV G E+ MT ++GI ++EHY +V +LG AG+L EA FI LP
Sbjct: 457 LSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFIEGLP 516
Query: 471 KPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMK 530
+ V ALL C I+G+S++ + A +LF P A V+++N Y+ +G W +
Sbjct: 517 EHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWKERAS 576
Query: 531 LRDDIVDNGLRKEAGVSWV 549
+ + G+ KE G+SW+
Sbjct: 577 SIKRMKEMGVAKEVGISWI 595
>gi|449433085|ref|XP_004134328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 601
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 170/552 (30%), Positives = 288/552 (52%), Gaps = 15/552 (2%)
Query: 2 FFNLHFLVLELSKSHQ--SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARI 59
F L +LS H+ +L++ K+LHA + K++L D F KL+ ++L + A
Sbjct: 14 FSTRKLLEQKLSDLHKCTNLNQVKQLHAQILKSNLHVDLFVVPKLISAFSLCRQMLLATN 73
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
F++ +V L+N++IRA++ + + A + F + R DNFT+ + + C+ N
Sbjct: 74 AFNQVQYPNVHLYNTMIRAHSHNSQPSQAFATFFAMQRDGHYADNFTFPFLLKVCTGNVW 133
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL--IDEAIKVFDGV-SDPDLVLCNSM 176
LP + VH G D ++L+ +YSK I A K+F + + D+V NSM
Sbjct: 134 LPVIESVHAQIEKFGFMSDVFVPNSLIDSYSKCGSCGISAAKKLFVSMGARRDVVSWNSM 193
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF 236
ISG A G ++++ ++FD M D + ++ G + VG+ F L
Sbjct: 194 ISGLAKGGLYEEARKVFDEM----PEKDGISWNTMLDGY-----VKVGKMDDAFKLFDEM 244
Query: 237 DSYDYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
+ VS S +V Y + M A +F+ + +LV+W+ +++G++++G +A+ F
Sbjct: 245 PERNVVSWSTMVLGYCKAGDMEMARMLFDKMPVKNLVSWTIIVSGFAEKGLAREAISLFD 304
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ K D + S+LAA A+S + G IH + + F+ + +S+ALVDMY+KCG
Sbjct: 305 QMEKACLKLDNGTVMSILAACAESGLLGLGEKIHASIKNNNFKCTTEISNALVDMYAKCG 364
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
L + VF + ++++++N+++ GL +HG +A E F+ + E+G +P++ T +LC
Sbjct: 365 RLNIAYDVFNDIKNKDVVSWNAMLQGLAMHGHGVKALELFKRMKEEGFSPNKVTMIGVLC 424
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H GL++DG F+ M +Y + + EHY MV LLG G LEEA I ++P +
Sbjct: 425 ACTHAGLIDDGIRYFSTMERDYTLVPEVEHYGCMVDLLGRKGRLEEAIRLIRNMPMAPNA 484
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ G LL C ++ +LA V L E +P MLSN YA G W+ V R +
Sbjct: 485 IIWGTLLGACRMHNAVELAREVLDHLVELEPTDSGNFSMLSNIYAAAGDWNCVANTRLRM 544
Query: 536 VDNGLRKEAGVS 547
G +K +G S
Sbjct: 545 RSIGTKKPSGAS 556
>gi|225428280|ref|XP_002279627.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17210-like [Vitis vinifera]
Length = 742
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 279/554 (50%), Gaps = 12/554 (2%)
Query: 4 NLHFLVLEL--SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
N+ LVL + +S ++ ++H + ++ L P L+ +YA +N + A LF
Sbjct: 149 NVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYA-DNDMERAEELF 207
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDL 120
D+ +R V W+ +I Y A LF + ++ D T + +AC+ D+
Sbjct: 208 DEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDI 267
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
R VHG I GL D ++++ YSK + A K F+ + + V NS+ISG
Sbjct: 268 SMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGL 327
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG---LWEPSLLSVGQGIHGFCLKSSFD 237
++L LF M + G DE TLV L+ +P IH ++ ++
Sbjct: 328 VRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKF---IHSIVIRWGYE 384
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
++V + L+ Y++C+ + A+ +F+ L D V+WSA+I G++ G +A+ F+++
Sbjct: 385 LNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEM 444
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
N +K + V I S+L A + SA++ HG I+ G V V +A++DMY+KCG +
Sbjct: 445 NQAQEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEI 504
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
GL + F+ + E+NI+++ ++I G++G A ++ GL P+ T ++L AC
Sbjct: 505 GLSRKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSAC 564
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
HGGLV +G F M +++G++ EHY MV +L AG L A + I +P+ +
Sbjct: 565 SHGGLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGA 624
Query: 478 S--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
GALLS C GNS L A ++ E +P+ A + S+ YA G W D ++R +
Sbjct: 625 GLWGALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLV 684
Query: 536 VDNGLRKEAGVSWV 549
G+R AG S V
Sbjct: 685 KARGVRVVAGYSLV 698
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 152/314 (48%), Gaps = 13/314 (4%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGL---GRDSITSS--ALVTAYSKLSLIDEAIKVFDG 164
I +ACS L HG +I + L G DS+TS+ +++ Y K +D A+ VFD
Sbjct: 56 ILKACSS------LPVRHGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDS 109
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ D V N MI G G DK L F + P+ TLV I + G
Sbjct: 110 MRSRDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEG 169
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+HG+ ++S F V + L+SMYA N M A +F+ + D+++WS +I GY Q
Sbjct: 170 LKMHGYIIRSGFLDIPSVQNSLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQT 228
Query: 285 GDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
G+ AL F ++ + D + + SVL A A + ++ G +HG VI G + + V
Sbjct: 229 GEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFV 288
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
++++DMYSKC + F M RN +++NS+I GL +A F + + G
Sbjct: 289 GNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGF 348
Query: 404 NPDESTFSALLCAC 417
DE T LL +C
Sbjct: 349 RADEVTLVNLLQSC 362
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 183/397 (46%), Gaps = 7/397 (1%)
Query: 26 HALVAKASLLRDPF-----YATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
H ASLL+ F ++ Y L SA +FD R WN +I +
Sbjct: 67 HGKSIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHL 126
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+ F+ +P+ T AC + +HG I SG
Sbjct: 127 SRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPS 186
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
++L++ Y+ + + A ++FD + + D++ + MI G+ G +LQLF M
Sbjct: 187 VQNSLLSMYADNDM-ERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNA 245
Query: 201 KTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
D T+V ++ +S+G+ +HG + D +V + ++ MY++C+ SA
Sbjct: 246 SIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESA 305
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+ FN + + V+W+++I+G + + +AL F + G +AD V + ++L +
Sbjct: 306 FKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYF 365
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ + IH VI+ G+EL+ V ++L+D YSKC + L ++F+ + ++ ++++++I
Sbjct: 366 VDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMI 425
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
G G +A F+++ + P+ T +LL A
Sbjct: 426 AGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLLEA 462
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 124/265 (46%), Gaps = 4/265 (1%)
Query: 168 PDLVLCNSMISGFAHCGFWD--KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
P L N I + +WD ++ + M + G + TLV I + G+
Sbjct: 10 PKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLPVRHGK 69
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
IH LK FDS + ++ Y + ++SA VF+S+ D V+W+ +I G+ +G
Sbjct: 70 SIHASLLKQGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRG 129
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
K L++FR+ + + + + + A + G +HGY+I+ GF V +
Sbjct: 130 ASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQN 189
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LN 404
+L+ MY+ + ++F+ M ER++I+++ +I G G A + F ++ +
Sbjct: 190 SLLSMYAD-NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIE 248
Query: 405 PDESTFSALLCACCHGGLVNDGREI 429
D T ++L AC + G ++ GR +
Sbjct: 249 LDGITMVSVLKACANTGDISMGRSV 273
>gi|115463111|ref|NP_001055155.1| Os05g0307200 [Oryza sativa Japonica Group]
gi|113578706|dbj|BAF17069.1| Os05g0307200 [Oryza sativa Japonica Group]
Length = 767
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 160/487 (32%), Positives = 261/487 (53%), Gaps = 3/487 (0%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ F +N IR +A + R + + LF ++LR+ ++PD++T + A + R H
Sbjct: 117 TAFSYNVAIRFFA-SSRPHTSLRLFLHMLRSAIRPDSYTLPFLLLAAARYPAPSLARAAH 175
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
GL T +L+T YS L A KVFDG+ D+V N+M+ + G
Sbjct: 176 ALLGKIGLNGHDHTVHSLITMYSYLDDPGAARKVFDGIPTRDVVSWNAMMKAYGRVGMNG 235
Query: 188 KSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+ ++F M++ G P+ T+ +++ + L +G+ + + + + V S L
Sbjct: 236 EVGRMFRDMVKEGTVAPNVVTVAVVLAACRDQGDLVLGRWVEEWSWSARMEMDSLVGSAL 295
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY +C + A VF+++ D+V W+A+ITGY+Q G +A+ F + + G + D
Sbjct: 296 LGMYEKCGEIAEARRVFDTIIDKDIVAWNAMITGYAQNGMSNEAISLFHSMRIAGMRPDK 355
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ +A VL+A + + G+ + GY + G +V V +ALVDMY+KCG L I+VF
Sbjct: 356 ITLAGVLSACSAVGALELGSELDGYASRRGLYSNVYVGTALVDMYAKCGDLDKAIEVFRK 415
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHGGLVND 425
M +N+ ++N++I GL +G +A + F+ + E+GL PD+ TF +L AC H GLV D
Sbjct: 416 MPCKNVASWNALICGLAFNGRGDEAIQHFQLMRNEEGLKPDDITFIGVLSACVHAGLVKD 475
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
G+ F +T E+ I K EHY MV LL +G+LEEA+ FI +P VD + GALL+ C
Sbjct: 476 GKRWFNSLTPEFQIIPKIEHYSCMVDLLARSGHLEEAWDFIEKIPDKVDAVMLGALLAAC 535
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
N ++ E V +++ + +P V+ S YA R DD K+R + + G+ K G
Sbjct: 536 RKCKNVEIGERVINRIIQLEPTNSWNYVVSSKIYASSDRLDDSAKMRGLMRERGVNKTPG 595
Query: 546 VSWVSGS 552
SWV S
Sbjct: 596 CSWVEVS 602
>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial; Flags: Precursor
gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 822
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 152/526 (28%), Positives = 262/526 (49%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH+ + K + F L+ Y++ + SAR +F+ + + +W I+ Y
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F D+ L + P+N+T+ +A + VHG + + D
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y++L + +A KVF+ + D+V + MI+ F GF ++++ LF M P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
E+TL +++G +G+ +HG +K FD YVS+ L+ +YA+C M++A +F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L + V+W+ +I GY G+ GKA FR+ V +S L A A A++
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +HG I+ V VS++L+DMY+KCG + VF M ++ ++N++I G
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG QA + ++ P+ TF +L C + GL++ G+E F M ++GI+ E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV+LLG +G L++A I +P + A+LS N + A A ++ +
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+P+ A V++SN YA +W +V +R + + G++KE G+SW+
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 190/398 (47%), Gaps = 8/398 (2%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K +H + K D F L+ Y A LFD+ P+R+ + ++ + YA
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYAC 127
Query: 82 AHRFNDAKSLFKNLLRT--QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
D L+ L R +L P FT + +++ ++H + G ++
Sbjct: 128 ----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI--CPWLHSPIVKLGYDSNA 181
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+AL+ AYS +D A VF+G+ D+V+ ++S + G+++ SL+L M
Sbjct: 182 FVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMA 241
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P+ YT + +G+HG LK+ + V L+ +Y + M+ A
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDA 301
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+ VFN + D+V WS +I + Q G +A+ F ++ + ++S+L A
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIG 361
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
G +HG V++ GF+L + VS+AL+D+Y+KC + +++F +S +N +++N+VI
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVI 421
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+G G +AF FR+ + ++ E TFS+ L AC
Sbjct: 422 VGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGAC 459
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/327 (20%), Positives = 144/327 (44%), Gaps = 4/327 (1%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D+ Y + R C + +D + +H + G D ++ L+ AY K +A+ +F
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + + + V ++ G+A + L+ + R G + + +
Sbjct: 108 DEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ +H +K +DS +V + L++ Y+ C ++SA VF + D+V W+ +++ Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G + +L + M G + + L A+ +HG +++ + L
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V L+ +Y++ G + +VF M + +++ ++ +I +GF +A + F + E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 403 LNPDESTFSALLCACCHGGLVNDGREI 429
+ P+E T S++L C G G ++
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQL 370
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 144/309 (46%), Gaps = 14/309 (4%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LH LV K D + + L+ +YA + +A LF + ++ WN++I Y
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A S+F+ LR Q+ T++ AC+ + + VHG AI + + S
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+K I A VF+ + D+ N++ISG++ G ++L++ D M
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 203 PDEYTLVGLISGLWEPSLLSVGQG-----IHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
P+ T +G++SG L+ GQ I ++ + Y + +V + R ++
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY----TCMVRLLGRSGQLD 603
Query: 258 SAYHVFNSL-FHPDLVTWSALITGYSQQGDYG---KALYYFRKLNMQGKKADPVLIASVL 313
A + + + P ++ W A+++ Q + ++ K+N + +A VL++++
Sbjct: 604 KAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPK-DEATYVLVSNMY 662
Query: 314 AAAAKSANV 322
A A + ANV
Sbjct: 663 AGAKQWANV 671
>gi|334188487|ref|NP_200728.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170817|sp|Q9FIF7.1|PP435_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59200, chloroplastic; Flags: Precursor
gi|9759241|dbj|BAB09765.1| unnamed protein product [Arabidopsis thaliana]
gi|332009773|gb|AED97156.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 544
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 247/477 (51%), Gaps = 40/477 (8%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
T + R+C + +P +H I + +D+ L+ S L +D A VF V
Sbjct: 31 TLISVLRSCKNIAHVPS---IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
S+P++ L +MI GF G + L+ M+ PD Y +I+ + + L V +
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNY----VITSVLKACDLKVCR 143
Query: 226 GIHGFCLKSSFDS------------------------------YDYVS-SVLVSMYARCN 254
IH LK F S D+V+ +V+++ Y+ C
Sbjct: 144 EIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECG 203
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ A +F + D V W+A+I G + + KAL FR++ M+ A+ VL+
Sbjct: 204 FIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLS 263
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + + G +H +V ELS V +AL++MYS+CG + +VF M ++++I+
Sbjct: 264 ACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVIS 323
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
YN++I GL +HG + +A FRD++ +G P++ T ALL AC HGGL++ G E+F M
Sbjct: 324 YNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMK 383
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+ ++ + EHY +V LLG G LEEAY FI ++P D + G LLS C I+GN +L
Sbjct: 384 RVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELG 443
Query: 495 EIVAHQLFEND-PRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E +A +LFE++ P G Y V+LSN YA G+W + ++R+ + D+G+ KE G S +
Sbjct: 444 EKIAKRLFESENPDSGTY-VLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 210/492 (42%), Gaps = 80/492 (16%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
+S ++++ +HA + + +D F +L+R+ + + + A +F +V+L+
Sbjct: 37 RSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYT 96
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++I + + R D SL+ ++ + PDN+ + +AC DL R +H +
Sbjct: 97 AMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKL 152
Query: 134 GLG-------------------------------RDSITSSALVTAYSKLSLIDEAIKVF 162
G G RD + ++ ++ YS+ I EA+++F
Sbjct: 153 GFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELF 212
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
V D V +MI G +K+L+LF M + +E+T V ++S + L
Sbjct: 213 QDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALE 272
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G+ +H F + ++V + L++MY+RC +N A VF + D+++++ +I+G +
Sbjct: 273 LGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLA 332
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
G +A+ FR + +G + + V + ++L A + HG
Sbjct: 333 MHGASVEAINEFRDMVNRGFRPNQVTLVALLNACS-----------HG------------ 369
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMS-----ERNIITYNSVILGLGLHGFTYQAFEFFRD 397
G L +G++VF +M E I Y ++ LG G +A+ F +
Sbjct: 370 ------------GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIEN 417
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
I + PD LL AC G + G +I R+ E + T Y+ + L +G
Sbjct: 418 I---PIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGT--YVLLSNLYASSG 472
Query: 458 NLEEAYSFIWSL 469
+E+ S+
Sbjct: 473 KWKESTEIRESM 484
>gi|297828580|ref|XP_002882172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297328012|gb|EFH58431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 638
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/522 (27%), Positives = 273/522 (52%), Gaps = 4/522 (0%)
Query: 25 LHALVAK-ASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+H + K +L D + + L+ +Y + A +F++ + + W+S++ +
Sbjct: 63 IHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVSGFEKNG 122
Query: 84 RFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A F+ + + + PD T + AC++ S+ R VHG + G D
Sbjct: 123 SPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFSNDLSLV 182
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+K EA+ +F +++ D++ +++I+ + G ++L++F+ M+ G
Sbjct: 183 NSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEMIDDGTE 242
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ T++ ++ + L G+ H ++ ++ VS+ LV MY +C AY V
Sbjct: 243 PNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 302
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAAKSAN 321
F+ + D+V+W ALI+G++ G +++ F + ++ + D +L+ VL + ++
Sbjct: 303 FSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGSCSELGF 362
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ H YVI++GF+ + + ++LV++YS+CG LG +VF ++ ++ + + S+I G
Sbjct: 363 LKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITG 422
Query: 382 LGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G+HG +A E F ++ + P+E TF ++L AC H GL+++G IF M +Y +
Sbjct: 423 YGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACSHAGLIHEGLRIFELMVNDYRLA 482
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY +V LLG G L+ A +P P + G LL C I+ N ++AE VA Q
Sbjct: 483 PNLEHYAVLVDLLGRVGELDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMAETVAKQ 542
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
LFE + Y +++SN Y G W++V KLR+ + G++K
Sbjct: 543 LFELESNHAGYYMLMSNMYGVKGEWENVEKLRNSVKQRGIKK 584
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 213/438 (48%), Gaps = 17/438 (3%)
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R+++ WN+++++ + + F + R + KPDNFT +AC E LR
Sbjct: 3 KRTLYQWNTLLKSLSRDKHWEQVMCHFSQMFRDEEKPDNFTLPVALKACGE------LRE 56
Query: 126 VHGGAIVSG-------LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
V G ++ G LG D S+L+ Y K + EA+++F+ + PD+V +SM+S
Sbjct: 57 VKYGEMIHGFLKKNVTLGSDLYVGSSLIYMYVKCGRMTEALRMFNELEKPDIVTWSSMVS 116
Query: 179 GFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
GF G ++++ F M TPD TL+ L+S + S +G+ +HGF ++ F
Sbjct: 117 GFEKNGSPYQAVEFFRRMATASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVMRRGFS 176
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
+ + + L++ YA+ A ++F + D+++WS +I Y Q G +AL F ++
Sbjct: 177 NDLSLVNSLLNCYAKSRAFKEAVNLFKMMAEKDVISWSTVIACYVQNGAAAEALRVFNEM 236
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + + + VL A A + ++ G H I+ G E V VS+ALVDMY KC
Sbjct: 237 IDDGTEPNVATVLCVLQACAAANDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSP 296
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD-IIEKGLNPDESTFSALLCA 416
VF + +++++++ ++I G L+G +++ E F ++E PD +L +
Sbjct: 297 EEAYAVFSRIPKKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMLKVLGS 356
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C G + E F +YG + +V+L G+L A S +++ D
Sbjct: 357 CSELGFLKQA-ECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNA-SKVFNEIALKDTV 414
Query: 477 VSGALLSCCHIYGNSDLA 494
V +L++ I+G A
Sbjct: 415 VWTSLITGYGIHGKGTKA 432
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + + H+ V K +PF LV LY+ L +A +F++ + +W S+I
Sbjct: 363 LKQAECFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNEIALKDTVVWTSLITG 422
Query: 79 YALAHRFNDAKSLFKNLLR-TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
Y + + A F +++R +++KP+ T+ I ACS H G I GL
Sbjct: 423 YGIHGKGTKALETFNHMVRSSEVKPNEVTFLSILSACS-----------HAGLIHEGL 469
>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Cucumis sativus]
Length = 878
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 272/530 (51%), Gaps = 8/530 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA++ K F L+ +Y + ++ A +FD R WN +I YA
Sbjct: 226 QVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIG 285
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ + +F + +K + + CS+ +L + +H G + +G +
Sbjct: 286 FYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT 345
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDP--DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
AL+ YSK S +DEA K+F ++D ++V +MI GF +K++ LF M R G
Sbjct: 346 ALMVTYSKCSSVDEAFKLF-SMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGV 404
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ +T +++G +PS S+ +H +K+ ++ V++ L+ Y + + +
Sbjct: 405 RPNHFTYSTVLAG--KPS--SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA- 320
VF S+ D+V WSA++TG +Q D KA+ F +L +G K + +SV+ A + SA
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
V G IH ++ G ++ VSSAL+ MYSK G + +VF ER+I+++NS+I
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G HG +A E F+ + +GL D+ TF +L AC H GLV +G + F M ++Y I
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID 640
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
K EHY MV L AG ++A I +P P P + LL+ C ++ N +L ++ A +
Sbjct: 641 KKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEK 700
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L P V+LSN +A G W++ +R + + ++KEAG SW+
Sbjct: 701 LVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIE 750
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 203/409 (49%), Gaps = 6/409 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H K+ L D T LV +Y R +FD+ ++V W S++ YA
Sbjct: 124 RQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARN 183
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++ L + + P+ FT+A + A ++ S + G VH + +G +
Sbjct: 184 GLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVC 243
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y K ++ +A VFD + D V N MI G+A GF+ + Q+F M G
Sbjct: 244 NALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+ + L+ + +H +K+ ++ + + L+ Y++C+ ++ A+ +
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363
Query: 263 FN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F+ + ++VTW+A+I G+ Q + KA+ F +++ +G + + ++VLA S
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ +H +I+ +E V++AL+D Y K G + +VF ++ ++I+ +++++ G
Sbjct: 424 ----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREI 429
L + +A E F ++++G+ P+E TFS+++ AC V G++I
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 181/366 (49%), Gaps = 5/366 (1%)
Query: 54 LPS----ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYAC 109
LPS A LFD+TP + + +N ++ ++ + +A LFK+L + L D T +C
Sbjct: 50 LPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSC 109
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ C D R VH ++ SG D ++LV Y K ++ +FD + +
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKN 169
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+V S++SG+A G D+ + L + M G P+ +T ++ L + S++ G +H
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHA 229
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+K+ F+ +V + L+ MY + + A VF+S+ D VTW+ +I GY+ G Y +
Sbjct: 230 MIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLE 289
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
F ++ + G K + + L ++ + +H V+++G+E + + +AL+
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349
Query: 350 MYSKCGYLGLGIQVFETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
YSKC + ++F + N++T+ ++I G + +A + F + +G+ P+
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNEKAVDLFCQMSREGVRPNHF 409
Query: 409 TFSALL 414
T+S +L
Sbjct: 410 TYSTVL 415
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 11/282 (3%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A ++FD D+ N ++ F+ ++L LF + G D TL +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
VG+ +H LKS F V + LV MY + +F+ + ++V+W++L
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
++GY++ G + ++ ++ M+G + A+VL A A + + G +H ++++GF
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
E + V +AL+ MY K +G VF++M R+ +T+N +I G GF + F+ F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 398 IIEKGLNPDESTFSALLCACC-----------HGGLVNDGRE 428
+ G+ + F L C H G+V +G E
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%)
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ +F+ D+ ++ L+ +S+ +AL+ F+ L+ G D + ++ L
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +H ++ GF V V ++LVDMY K G +F+ M +N++++ S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ G +G + + +G+NP+ TF+ +L A ++ G ++
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQV 227
>gi|296085266|emb|CBI28998.3| unnamed protein product [Vitis vinifera]
Length = 732
Score = 264 bits (674), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 158/534 (29%), Positives = 267/534 (50%), Gaps = 3/534 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L+ +++H L+ ++ + L+ +Y N A +FD+ + + WN++
Sbjct: 198 NLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFA 257
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
+ + F L+ T LKP+ T++ + R C E DL GL+F H A G+
Sbjct: 258 GLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQF-HCLAFRFGIS 316
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
++ +S+L+ +S+ + A VFD + CN MISG+ ++L LF +
Sbjct: 317 DEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNL 376
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
LG DE T + + +G+ +HG +KS F S YV S L+ Y +
Sbjct: 377 NGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLL 436
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ ++ FN + DLV+W A+I+ +G +A+ +L G K D + S+
Sbjct: 437 DDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCC 496
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNIITY 375
A A +H V++ G+E V V+SA++D Y+KCG + +VF+ S R++I +
Sbjct: 497 AGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILF 556
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N++++ HG +A E F + L P ++TF +++ AC H GLV G F M
Sbjct: 557 NTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNL 616
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+YG+ ++Y +V L G LE+A I ++P P PA+ +LL+ C I+GN +L E
Sbjct: 617 DYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGE 676
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +L + P A V+LS Y+E+G W D K+R +++ GL K+ G SW+
Sbjct: 677 WAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWI 730
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 180/403 (44%), Gaps = 7/403 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA + K D F L+R+Y L +F + P +++ W ++
Sbjct: 97 QIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNG 156
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSE------NSDLPGLRFVHGGAIVSGLGR 137
F ++ ++RT L P+ F C+T+AC+ +L R +HG I S +G
Sbjct: 157 EFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSEVGF 216
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ ++L+ Y K A+KVFD + D D++ N++ +G + + + F ++
Sbjct: 217 STAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLM 276
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P+ T L E L G H + V+S L++M++RC M
Sbjct: 277 LTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMR 336
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+S + T + +I+GY+ +AL F LN G +AD +S L A
Sbjct: 337 MACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACF 396
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ N G +HG +++ GF V S+L+ Y G L + F + +++++ +
Sbjct: 397 RTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGA 456
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+I L G++ +A + E G PDE F ++ CC G
Sbjct: 457 MISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIF-NCCAG 498
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 120/272 (44%), Gaps = 11/272 (4%)
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+G IH +K F + + + L+ MY +C + VF + +LV+W+ +++G
Sbjct: 94 LGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAV 153
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK------SANVWPGAVIHGYVIQHG 336
Q G++ L + ++ G + + V A A N+ G IHG +IQ
Sbjct: 154 QNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGGCLVVGNLNFGRQIHGLIIQSE 213
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
S V ++L+DMY K G ++VF+ + +++II++N+V GL + FF
Sbjct: 214 VGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFH 273
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
++ GL P+ TFS L C + G + F + +GI + ++ +
Sbjct: 274 KLMLTGLKPNCVTFSILFRFCGEALDLVSGLQ-FHCLAFRFGISDEASVTSSLINMFSRC 332
Query: 457 GNLEEAYSFIWSLP----KPVDPAVSGALLSC 484
G + A S P + +SG L+C
Sbjct: 333 GAMRMACLVFDSAPFKSIHTCNEMISGYNLNC 364
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ DP +++ L +A S + G+ IH +I+ GF + + L+ MY+KCG+L G++
Sbjct: 73 RNDPTALSTALTHSANSKCILLGSQIHAQIIKLGFCNDIFSQNNLIRMYTKCGFLAGGLK 132
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH-GG 421
VF M +N++++ V+ G +G + ++I GL P+E + AC GG
Sbjct: 133 VFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFALGCVTKACAALGG 192
Query: 422 LVNDGREIFTRMTEEYGIQAKT 443
+ G F R IQ++
Sbjct: 193 CLVVGNLNFGRQIHGLIIQSEV 214
>gi|449446125|ref|XP_004140822.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cucumis sativus]
Length = 809
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 168/615 (27%), Positives = 305/615 (49%), Gaps = 97/615 (15%)
Query: 34 LLRDPFYATKLVRL---YALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKS 90
+R+ + A++L++ + ++ + RI F+ + F+WN +IRAY + + A +
Sbjct: 6 FIRETYAASRLIKFSTHFPFIHIDYTRRI-FNFIENTNCFMWNMMIRAYIQTNSPHFAFT 64
Query: 91 LFKNLLRTQLKPDNFTY-----AC------------------------------------ 109
L+K++L L DN+TY AC
Sbjct: 65 LYKSMLSNYLGADNYTYPLLIQACSIRRSEWEAKQVHNHVLKLGFDSDVYVRNTLINCFS 124
Query: 110 ----ITRACSENSDLPGLRFVHGGAIVSG---LG--------------RDSITSSALVTA 148
+T AC ++ L V +I++G +G R I S++++
Sbjct: 125 VCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMPERSIIASNSMIVL 184
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
+ L+ EA K+FD + + D+V +++I+ F ++++++ F M ++G DE
Sbjct: 185 FGMRGLVVEACKLFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVA 244
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--------------- 253
V +S ++++G+ IH LK +SY + + L+ MY++C
Sbjct: 245 VSALSACANLLVVNMGKLIHSLSLKIGTESYINLQNALIYMYSKCGDIMVARKLFDEAYL 304
Query: 254 ----------------NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
N +++A +F+S+ D+V+WS++I+GY+Q + + L F+++
Sbjct: 305 LDLISWNSMISGYLKCNLVDNAKAIFDSMPEKDVVSWSSMISGYAQNDLFDETLALFQEM 364
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
M G K D + SV++A A+ A + G +H Y+ ++G ++V++ + L+DMY KCG +
Sbjct: 365 QMSGFKPDETTLVSVISACARLAALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCV 424
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++VF M E+ I T+N++ILGL ++G + + F ++ + + P+E TF +L AC
Sbjct: 425 ETALEVFYGMIEKGISTWNALILGLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGAC 484
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H GLV++G+ F M ++ IQ +HY MV LLG AG L+EA + +P D A
Sbjct: 485 RHMGLVDEGQHHFYSMIHDHKIQPNVKHYGCMVDLLGRAGKLQEAEELLNRMPMTPDVAT 544
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
GALL C +G+S++ V +L E P + V+LSN YA G+WDDV+++R +
Sbjct: 545 WGALLGACKKHGDSEMGRRVGRKLIELQPDHDGFHVLLSNIYASKGKWDDVLEIRGMMTK 604
Query: 538 NGLRKEAGVSWVSGS 552
+ + K G S + +
Sbjct: 605 HRVLKIPGCSMIEAN 619
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 183/435 (42%), Gaps = 86/435 (19%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLI--DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+++G R++ +S L+ + I D ++F+ + + + + N MI +
Sbjct: 2 LLTGFIRETYAASRLIKFSTHFPFIHIDYTRRIFNFIENTNCFMWNMMIRAYIQTNSPHF 61
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGL------WEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+ L+ ML D YT LI WE + +H LK FDS YV
Sbjct: 62 AFTLYKSMLSNYLGADNYTYPLLIQACSIRRSEWE------AKQVHNHVLKLGFDSDVYV 115
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++ ++ C+ M A VFN D V+W++++ GY + G+ +A + + ++
Sbjct: 116 RNTLINCFSVCSNMTDACRVFNESSVLDSVSWNSILAGYIEIGNVEEAKHIYHQMP---- 171
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
E S++ S++++ ++ G + +
Sbjct: 172 -----------------------------------ERSIIASNSMIVLFGMRGLVVEACK 196
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
+F+ M E++++T++++I + +A F + + G+ DE + L AC + +
Sbjct: 197 LFDEMLEKDMVTWSALIACFQQNEMYEEAIRTFVGMHKIGVMVDEVVAVSALSACANLLV 256
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
VN G+ I + ++ TE YI NL+ A +++S K D V+ L
Sbjct: 257 VNMGKLIHS-----LSLKIGTESYI----------NLQNALIYMYS--KCGDIMVARKLF 299
Query: 483 SCCHI------------YGNSDLAEIVAHQLFENDPRKG--AYKVMLSNTYAEDGRWDDV 528
++ Y +L + A +F++ P K ++ M+S YA++ +D+
Sbjct: 300 DEAYLLDLISWNSMISGYLKCNLVD-NAKAIFDSMPEKDVVSWSSMISG-YAQNDLFDET 357
Query: 529 MKLRDDIVDNGLRKE 543
+ L ++ +G + +
Sbjct: 358 LALFQEMQMSGFKPD 372
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 45/97 (46%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + K +HA + + L + T L+ +Y + +A +F ++ + WN++I
Sbjct: 388 ALEQGKWVHAYIKRNGLTINVILGTTLIDMYMKCGCVETALEVFYGMIEKGISTWNALIL 447
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
A+ + +F N+ + + P+ T+ + AC
Sbjct: 448 GLAMNGLVESSLDMFSNMKKCHVTPNEITFMGVLGAC 484
>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 627
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 244/446 (54%), Gaps = 2/446 (0%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y + AC + L + VH I + + + L+ Y K +++A KV D +
Sbjct: 54 YDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 113
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ ++V +MIS ++ G ++L +F M+R P+E+T +++ S L++G+
Sbjct: 114 EKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQ 173
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IHG +K ++DS+ +V S L+ MYA+ + A +F L D+V+ +A+I GY+Q G
Sbjct: 174 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGL 233
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+AL F++L +G + + V AS+L A + A + G H +V++ ++ ++
Sbjct: 234 DEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNS 293
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII-EKGLNP 405
L+DMYSKCG L ++F+ M ER I++N++++G HG + E FR + EK + P
Sbjct: 294 LIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKP 353
Query: 406 DESTFSALLCACCHGGLVNDGREIFTRMTE-EYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
D T A+L C HG + + G I+ M EYGI+ TEHY +V +LG AG ++EA+
Sbjct: 354 DAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFE 413
Query: 465 FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGR 524
FI +P V G+LL C ++ + D+ E V H+L E +P V+LSN YA GR
Sbjct: 414 FIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIEPENAGNYVILSNLYASAGR 473
Query: 525 WDDVMKLRDDIVDNGLRKEAGVSWVS 550
W+DV +R ++ + KE G SW+
Sbjct: 474 WEDVNNVRAMMMQKAVTKEPGRSWIQ 499
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 180/357 (50%), Gaps = 3/357 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L + +HA + K L + T+L+ Y + L AR + D+ P+++V W ++I
Sbjct: 65 RALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMI 124
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y+ ++A S+F ++R+ KP+ FT+A + +C S L + +HG +
Sbjct: 125 SRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYD 184
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S+L+ Y+K I+EA ++F+ + + D+V C ++I+G+A G +++L++F +
Sbjct: 185 SHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFQRL 244
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G P+ T L++ L +LL G+ H L+ Y + + L+ MY++C +
Sbjct: 245 QSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNL 304
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAA 315
+ A +F+++ ++W+A++ GYS+ G + L FR + + + K D V + +VL+
Sbjct: 305 SYAQRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSG 364
Query: 316 AAKSANVWPGAVIHGYVI--QHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+ G I+ ++ ++G + +VDM + G + + + M +
Sbjct: 365 CSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 421
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 142/280 (50%), Gaps = 9/280 (3%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ LG + L++ + L GQ +H +K+ + Y+ + L+ Y +C+C
Sbjct: 42 MVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC 101
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A V + + ++V+W+A+I+ YSQ G +AL F ++ K + A+VL +
Sbjct: 102 LEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTS 161
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+++ + G IHG +++ ++ + V S+L+DMY+K G + ++FE + ER++++
Sbjct: 162 CIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLPERDVVSC 221
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE----IFT 431
++I G G +A E F+ + +G+ P+ T+++LL A L++ G++ +
Sbjct: 222 TAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLR 281
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
R Y + + ++ + GNL A ++P+
Sbjct: 282 RELPFYAVLQNS-----LIDMYSKCGNLSYAQRLFDNMPE 316
>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 868
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 277/531 (52%), Gaps = 6/531 (1%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
R ++H +V K L + + L+ LY + ARILFDKT +SV WNS+I YA
Sbjct: 212 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 271
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+A +F ++ ++ ++A + + C+ +L +H + G D
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQN 331
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+AL+ AYSK + + +A+++F + ++V +MISGF ++++ LF M R
Sbjct: 332 IRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK 391
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P+E+T +++ L ++S + +H +K++++ V + L+ Y + + A
Sbjct: 392 GVRPNEFTYSVILTAL---PVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEA 447
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL-AAAAK 318
VF+ + D+V WSA++ GY+Q G+ A+ F +L G K + +S+L AA
Sbjct: 448 AKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAAT 507
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+A++ G HG+ I+ + S+ VSSAL+ MY+K G + +VF+ E++++++NS+
Sbjct: 508 NASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSM 567
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G HG +A + F+++ ++ + D TF + AC H GLV +G + F M +
Sbjct: 568 ISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 627
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I EH MV L AG LE+A I ++P P + +L+ C ++ ++L + A
Sbjct: 628 IAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAA 687
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ P A V+LSN YAE G W + K+R + + ++KE G SW+
Sbjct: 688 EKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 738
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 205/431 (47%), Gaps = 20/431 (4%)
Query: 1 MFFNLHFLVLELS----KSHQSLSRT-------KELHALVAKASLLRDPFYATKLVRLYA 49
+F N+H L +E+ S +S T ++LH K L D T LV Y
Sbjct: 80 LFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYM 139
Query: 50 LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYAC 109
+ R +FD+ +R+V W ++I YA ++ +LF + +P++FT+A
Sbjct: 140 KGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAA 199
Query: 110 ITRACSENS-DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP 168
+E GL+ VH + +GL + S++L+ Y K + +A +FD
Sbjct: 200 ALGVLAEEGVGGRGLQ-VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK 258
Query: 169 DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGI 227
+V NSMISG+A G ++L +F + +RL E + +I L + +
Sbjct: 259 SVVTWNSMISGYAANGLDLEALGMF-YSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
H +K F + + L+ Y++C M A +F + ++V+W+A+I+G+ Q
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+A+ F ++ +G + + + +L A V + +H V++ +E S V +A
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVGTA 433
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+D Y K G + +VF + +++I+ +++++ G G T A + F ++ + G+ P+
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 407 ESTFSALLCAC 417
E TFS++L C
Sbjct: 494 EFTFSSILNVC 504
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 5/377 (1%)
Query: 45 VRLYALNNV----LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
VR+Y V L +A LFDK+P R + S++ ++ R +AK LF N+ R +
Sbjct: 30 VRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGM 89
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+ D ++ + + + D R +H I G D ++LV Y K S + K
Sbjct: 90 EMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
VFD + + ++V ++ISG+A D+ L LF M G P+ +T + L E +
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
G +H +K+ D VS+ L+++Y +C + A +F+ +VTW+++I+G
Sbjct: 210 GGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISG 269
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y+ G +AL F + + + ASV+ A + +H V+++GF
Sbjct: 270 YAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD 329
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ +AL+ YSKC + +++F+ + N++++ ++I G + +A + F ++
Sbjct: 330 QNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMK 389
Query: 400 EKGLNPDESTFSALLCA 416
KG+ P+E T+S +L A
Sbjct: 390 RKGVRPNEFTYSVILTA 406
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 124/247 (50%), Gaps = 4/247 (1%)
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPD--EYTLVGLISGLWEPSLLSVGQGIHGFCL 232
S++ GF+ G ++ +LF + RLG D ++ V +S L G+ +H C+
Sbjct: 63 SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELF--GRQLHCQCI 120
Query: 233 KSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
K F V + LV Y + + VF+ + ++VTW+ LI+GY++ + L
Sbjct: 121 KFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLT 180
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ +G + + A+ L A+ G +H V+++G + ++ VS++L+++Y
Sbjct: 181 LFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG + +F+ ++++T+NS+I G +G +A F + + ES+F++
Sbjct: 241 KCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFAS 300
Query: 413 LLCACCH 419
++ C +
Sbjct: 301 VIKLCAN 307
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%)
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
+A+++F+ D ++ +L+ G+S+ G +A F ++ G + D + +SVL +A
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G +H I+ GF V V ++LVD Y K G +VF+ M ERN++T+ +
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+I G + + F + +G P+ TF+A L G+ G ++ T
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 218
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 15 SHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNS 74
++ S+ + K+ H K+ L ++ L+ +YA + SA +F + ++ + WNS
Sbjct: 507 TNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNS 566
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I YA + A +FK + + ++K D T+ + AC+ H G + G
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACT-----------HAGLVEEG 615
Query: 135 ------LGRDSITS------SALVTAYSKLSLIDEAIKVFDGVSDP 168
+ RD + S +V YS+ +++A+KV + + +P
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNP 661
>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
Length = 785
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 156/535 (29%), Positives = 267/535 (49%), Gaps = 8/535 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +HAL L F + LV +Y+ + AR +FD +R WNS++ Y A
Sbjct: 129 RAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERDDVSWNSLVSGYVRA 188
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD--LPGLRFVHGGAIVSGLGRDSI 140
+ +F + R + ++F + + CS D + VHG I +GL D
Sbjct: 189 GAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGCVIKAGLDSDVF 248
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG------FWDKSLQLFD 194
SA++ Y+K + EA +F V +P++V+ N+MI+GF ++L L+
Sbjct: 249 LVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTETVIGKEVASEALTLYS 308
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
+ G P E+T ++ L G+ IHG +K +F D++ S L+ +Y
Sbjct: 309 EVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDFIGSALIDLYFNSG 368
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
CM + F S D+VTW+A+++G Q + KAL F + G K D I+SV+
Sbjct: 369 CMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLGAGLKPDLFTISSVMN 428
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A A G I + + GF+ ++ ++ V MY++ G + + F+ M ++++
Sbjct: 429 ACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDVDAATRRFQEMESHDVVS 488
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+++VI HG A FF ++++ + P+E TF +L AC HGGLV++G + M
Sbjct: 489 WSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTACSHGGLVDEGLRYYETMN 548
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
++YG+ +H +V LLG AG L +A +FI + DP + +LL+ C I+ + +
Sbjct: 549 KDYGLSPTIKHCTCVVDLLGRAGRLADAEAFISNGIFHADPVIWRSLLASCRIHRDLERG 608
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++VA+++ E +P A V+L N Y + G K RD + G++KE G+SW+
Sbjct: 609 QLVANRIMELEPTSSASYVILYNMYLDAGELSLASKTRDLMKQRGVKKEPGLSWI 663
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 194/389 (49%), Gaps = 11/389 (2%)
Query: 50 LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYAC 109
L LP AR L D+ P+R+ +N +I AY+ + R + D F+YA
Sbjct: 56 LGGPLP-ARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAA 114
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
ACS L R VH AI+ GL S++LV+ YSK + EA +VFD + D
Sbjct: 115 ALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVFDVAEERD 174
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQG 226
V NS++SG+ G ++ +++F M R G + + L +I SG + + + + +
Sbjct: 175 DVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGT-MDIAEA 233
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ-QG 285
+HG +K+ DS ++ S ++ MYA+ + A +F S+ P++V ++ +I G+ + +
Sbjct: 234 VHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEPNVVMFNTMIAGFCRTET 293
Query: 286 DYGK-----ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
GK AL + ++ +G + +SVL A + + G IHG VI++ F+
Sbjct: 294 VIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQED 353
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ SAL+D+Y G + G + F + + +I+T+ +++ G + +A F + +
Sbjct: 354 DFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEKALSLFHESLG 413
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREI 429
GL PD T S+++ AC + G +I
Sbjct: 414 AGLKPDLFTISSVMNACASLAVARAGEQI 442
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 107/236 (45%), Gaps = 7/236 (2%)
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
++ + L++ Y R A + + + + V+++ LI YS++G +L +
Sbjct: 44 FLRNTLLAAYCRLGGPLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRA 103
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G D A+ LAA +++ ++ G +H I G V VS++LV MYSKCG +G
Sbjct: 104 GVDVDRFSYAAALAACSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEA 163
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF+ ER+ +++NS++ G G + F + G+ + +++ CC G
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVI-KCCSG 222
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPKP 472
DG I+A + ++ M+ + G L EA + S+ +P
Sbjct: 223 R--GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAKKGALVEAAALFRSVQEP 276
>gi|414589059|tpg|DAA39630.1| TPA: hypothetical protein ZEAMMB73_362613 [Zea mays]
Length = 692
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 157/488 (32%), Positives = 250/488 (51%), Gaps = 36/488 (7%)
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ + PD FTY + RAC+E +L R VH A+ +G+ +ALV+ Y+K +
Sbjct: 152 KDAVPPDAFTYPKVLRACAETGNLALGRAVHVRAVDAGMDGHLFFQNALVSMYAKCWDLA 211
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF-------------DW-------- 195
A VFDG+ D+V NSMISG+A G W K+++LF W
Sbjct: 212 AARTVFDGMEHRDVVSWNSMISGYAASGQWRKAVELFLRMQAEGAEMNSVTWNTIAGGYI 271
Query: 196 --------------MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
M+R G + D TLV + L +G+ IHG ++ D
Sbjct: 272 QMHDYRAAVGLIRDMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDS 331
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V + +++MYARCN M A +F + P LV W+ I G++ D A FR++ + G
Sbjct: 332 VINAVITMYARCNDMERALMLFKMIRCPGLVAWNTTIAGFALLDDAEAASRLFREMVVCG 391
Query: 302 K-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ + V + + LA A+ AN+ G +H ++++ GF+ ++ ++L+DMYSK G L +
Sbjct: 392 DVQPNYVTVVTYLALCARVANLQHGRELHTHIVKQGFKGYRLLWNSLIDMYSKSGRLSVA 451
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
VF+TM + ++I++ S+I G G+ G + FF+ +I+ G+ PD +L AC H
Sbjct: 452 QNVFDTMDDPDMISFTSMIAGYGMQGKGIISLRFFKQMIDSGIMPDAIIMVTVLSACSHS 511
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV +G E+F +M + YGI+ + EHY MV L AG LE+A + P P + A
Sbjct: 512 GLVGEGEELFDKMVKSYGIKPQMEHYSCMVDLYARAGLLEKAEELLNQTPFPPTSTMVAA 571
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
L+ CH GN + E A +L E + V+++N YA G W+++ +R + D G+
Sbjct: 572 LVGACHEQGNIIIGERSARRLLEMKTENAGHFVLIANMYAAAGCWNELATVRKLMRDLGV 631
Query: 541 RKEAGVSW 548
K G++W
Sbjct: 632 MKAPGLAW 639
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 205/493 (41%), Gaps = 79/493 (16%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L+ + +H A + F+ LV +YA L +AR +FD R
Sbjct: 165 VLRACAETGNLALGRAVHVRAVDAGMDGHLFFQNALVSMYAKCWDLAAARTVFDGMEHRD 224
Query: 69 VFLWNSIIRAYALA-----------------------------------HRFNDAKSLFK 93
V WNS+I YA + H + A L +
Sbjct: 225 VVSWNSMISGYAASGQWRKAVELFLRMQAEGAEMNSVTWNTIAGGYIQMHDYRAAVGLIR 284
Query: 94 NLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
+++R D T + ACS L + +HG A+ +A++T Y++ +
Sbjct: 285 DMVRGGASIDFVTLVIGSNACSRAGWLRLGKEIHGLAVRMQCHEIDSVINAVITMYARCN 344
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLI 212
++ A+ +F + P LV N+ I+GFA + + +LF M+ G P+ T+V +
Sbjct: 345 DMERALMLFKMIRCPGLVAWNTTIAGFALLDDAEAASRLFREMVVCGDVQPNYVTVVTYL 404
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+ + L G+ +H +K F Y + + L+ MY++ ++ A +VF+++ PD++
Sbjct: 405 ALCARVANLQHGRELHTHIVKQGFKGYRLLWNSLIDMYSKSGRLSVAQNVFDTMDDPDMI 464
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+++++I GY QG +L +F+++ G D +++ +VL+A + S V G + +
Sbjct: 465 SFTSMIAGYGMQGKGIISLRFFKQMIDSGIMPDAIIMVTVLSACSHSGLVGEGEELFDKM 524
Query: 333 IQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
++ +G + + S +VD+Y++ G L
Sbjct: 525 VKSYGIKPQMEHYSCMVDLYARAGLL---------------------------------- 550
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE---HYIY 448
E +++ + P ST A L CH G I + ++ KTE H++
Sbjct: 551 -EKAEELLNQTPFPPTSTMVAALVGACH----EQGNIIIGERSARRLLEMKTENAGHFVL 605
Query: 449 MVKLLGLAGNLEE 461
+ + AG E
Sbjct: 606 IANMYAAAGCWNE 618
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
Y ++ D VL A A++ N+ G +H + G + + +ALV MY+
Sbjct: 146 YHEMIDKDAVPPDAFTYPKVLRACAETGNLALGRAVHVRAVDAGMDGHLFFQNALVSMYA 205
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KC L VF+ M R+++++NS+I G G +A E F + +G + T++
Sbjct: 206 KCWDLAAARTVFDGMEHRDVVSWNSMISGYAASGQWRKAVELFLRMQAEGAEMNSVTWNT 265
Query: 413 L 413
+
Sbjct: 266 I 266
>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
Length = 736
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 163/574 (28%), Positives = 291/574 (50%), Gaps = 36/574 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYAL--NNVLPSARILFDKTPQR 67
L L + ++L K++H+ + K L F +KL+ A+ + L A LF
Sbjct: 32 LTLLSNCKTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIRNP 91
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ +WN +IR + + A + +++ + +P+ +T+ I ++C++ + VH
Sbjct: 92 NHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVH 151
Query: 128 GGAIVSGLG-------------------------------RDSITSSALVTAYSKLSLID 156
+ GL RD+++ +AL+T Y+ +D
Sbjct: 152 AHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGFLD 211
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
EA ++FD + D+V N+MISG+A G ++++ F+ M R TP+ T++ ++S
Sbjct: 212 EARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACA 271
Query: 217 EP-SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ S L +G + + S + + L+ MY +C + A ++F + ++V+W+
Sbjct: 272 QSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVVSWN 331
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
+I GY+ Y +AL FR++ + V S+L A A + G +H YV ++
Sbjct: 332 VMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYVDKN 391
Query: 336 --GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFE 393
+ +V + ++L+DMY+KCG L + ++F+ M+ +++ T+N++I G +HG T A
Sbjct: 392 MKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALG 451
Query: 394 FFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLL 453
F + +G PD+ TF +L AC H GL++ GR F+ M ++Y + K HY M+ L
Sbjct: 452 LFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDYKVSPKLPHYGCMIDLF 511
Query: 454 GLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKV 513
G AG +EA + + ++ D A+ +LL C I+ +LAE VA LFE +P + V
Sbjct: 512 GRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESVAKHLFELEPENPSAYV 571
Query: 514 MLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+LSN YA GRW+DV K+R + DN ++K G S
Sbjct: 572 LLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCS 605
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 156/326 (47%), Gaps = 14/326 (4%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHA-----------LVAKASLLRDPFYATKLVRLYALNN 52
+H VL+L H + T ++ LV S +RD T L+ YA
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208
Query: 53 VLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITR 112
L AR LFD+ P R V WN++I YA + R +A + F+ + R ++ P+ T +
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268
Query: 113 ACSEN-SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
AC+++ S L +V GLG + + L+ Y K ++EA +F+ + D ++V
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVV 328
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N MI G+ H + ++L LF M++ P++ T + ++ L +G+ +H +
Sbjct: 329 SWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYV 388
Query: 232 LKSSFDSYDYVS--SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
K+ + V+ + L+ MYA+C + A +F+ + L TW+A+I+G++ G
Sbjct: 389 DKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDT 448
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAA 315
AL F ++ +G D + VL A
Sbjct: 449 ALGLFSRMTSEGFVPDDITFVGVLTA 474
>gi|357159954|ref|XP_003578611.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 600
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/535 (32%), Positives = 274/535 (51%), Gaps = 18/535 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK--TPQRSVFLWNSII 76
L +ELHA + K L DP A+KL+ YAL+ LP++R +F P + FL N+++
Sbjct: 37 LHHLQELHAQLLKHGLHLDPVAASKLLSSYALHRRLPASRGVFASFPNPHATTFLPNTLL 96
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
RAYAL +A ++F + D+FTY+ + +A S P LR VH + G
Sbjct: 97 RAYALNALPREAVAVFSAMPHR----DSFTYSFLIKALSSAGVAP-LRAVHSHVVKLGSI 151
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ +AL+ AYSK +A KVF+ + D+V NS ++ G + + ++FD M
Sbjct: 152 EDTYVGNALIDAYSKNGGFSDASKVFEEMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEM 211
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYARCNC 255
L D + L+ G G F L + VS S +VS Y +
Sbjct: 212 LE----KDTVSWNTLLDGY-----TKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGD 262
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
M A +F+ + +LVTW+ +++ +Q G +A F ++ + D + S+LAA
Sbjct: 263 MEMARVIFDKMPTKNLVTWTIMVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAA 322
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET-MSERNIIT 374
A+S ++ G IH YV S V +AL+DM+ KCG + VF+T + E++ ++
Sbjct: 323 CAESGSLALGKRIHRYVRTRQLGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVS 382
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N++I G +HG +A +FF + +G PD T +L AC H G V +GR F M
Sbjct: 383 WNTIIGGFAMHGHGDKALDFFAQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANME 442
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+YG+ + EHY M+ LLG G ++EA I S+P + + G+LLS C ++ N + A
Sbjct: 443 RDYGVVPQIEHYGCMIDLLGRGGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLHKNVEYA 502
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
EI ++L + P +LS+ YAE G+W D+ K R + G +K +G SW+
Sbjct: 503 EIAVNELSKLQPSNAGNYAVLSSIYAEAGKWSDMAKARMQMKGTGSQKSSGSSWI 557
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 177/393 (45%), Gaps = 27/393 (6%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F FL+ LS + ++ + +H+ V K + D + L+ Y+ N A +F+
Sbjct: 121 FTYSFLIKALSSA--GVAPLRAVHSHVVKLGSIEDTYVGNALIDAYSKNGGFSDASKVFE 178
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R V WNS + A A+ +F + L+ D ++ N+ L G
Sbjct: 179 EMPRRDVVSWNSAMAAMVRQGEVEGARRMFDEM----LEKDTVSW---------NTLLDG 225
Query: 123 LRFVHGGAIVSGLG-------RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
+ G + R+ ++ S +V+ Y K ++ A +FD + +LV
Sbjct: 226 --YTKAGDVEEAFKLFQCMPERNVVSWSTVVSGYCKKGDMEMARVIFDKMPTKNLVTWTI 283
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
M+S A G +++ +LF M D +V +++ E L++G+ IH +
Sbjct: 284 MVSACAQNGLVEEAGKLFTQMKEASVELDVAAVVSILAACAESGSLALGKRIHRYVRTRQ 343
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNS-LFHPDLVTWSALITGYSQQGDYGKALYYF 294
+V + L+ M+ +C C+N A +VF++ + D V+W+ +I G++ G KAL +F
Sbjct: 344 LGRSTHVCNALIDMFCKCGCINRADYVFDTEIVEKDSVSWNTIIGGFAMHGHGDKALDFF 403
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSK 353
++ +QG D V + +VL+A V G + + +G + ++D+ +
Sbjct: 404 AQMKLQGFCPDAVTMINVLSACTHMGFVEEGRRYFANMERDYGVVPQIEHYGCMIDLLGR 463
Query: 354 CGYLGLGIQVFETMS-ERNIITYNSVILGLGLH 385
G + + + ++M + N + + S++ LH
Sbjct: 464 GGLIKEAVDLIKSMPWDPNEVIWGSLLSACRLH 496
>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Vitis vinifera]
Length = 766
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 271/518 (52%), Gaps = 22/518 (4%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD ++ YA N + A+ +FD+ P ++ WN ++ AY R DA+ LF++
Sbjct: 140 RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES- 198
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL-GRDSITSSALVTAYSKLSL 154
K D + I+ C + R V I + RD ++ + +++ Y++
Sbjct: 199 -----KAD---WELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGE 250
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV--GLI 212
+ EA ++F+ D+ +M+SG+ G D++ ++FD M P++ ++ +I
Sbjct: 251 LLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM------PEKNSVSWNAII 304
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+G + + + + + S++ +++ YA+ + A + F+ + D +
Sbjct: 305 AGYVQCKRMDQARELFEAMPCQNVSSWN----TMITGYAQNGDIAQARNFFDRMPQRDSI 360
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W+A+I GY+Q G +AL+ F ++ G++ + S L+ A+ A + G +HG V
Sbjct: 361 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 420
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
++ G E V +AL+ MY KCG + VFE + E+ ++++N++I G HGF +A
Sbjct: 421 VKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 480
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
F + + G+ PD+ T +L AC H GLV+ G E F MT++YGI A ++HY M+ L
Sbjct: 481 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDL 540
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG L++A + + ++P D A GALL I+GN++L E A +FE +P
Sbjct: 541 LGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMY 600
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+LSN YA GRW DV ++R + D G++K G SWV
Sbjct: 601 VLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVE 638
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 152/361 (42%), Gaps = 72/361 (19%)
Query: 31 KASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKS 90
+ S +RD F T +V Y N +L AR +FD P+++ WN+II Y R + A+
Sbjct: 259 EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARE 318
Query: 91 LF---------------------------KNLLRTQLKPDNFTYACI------------- 110
LF +N + D+ ++A I
Sbjct: 319 LFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 378
Query: 111 -------------------TRACSENSDLPGLRF---VHGGAIVSGLGRDSITSSALVTA 148
T S +++ L VHG + +GL +AL+
Sbjct: 379 LHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVM 438
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y K ID+A VF+G+ + ++V N+MI+G+A GF ++L LF+ M + G PD+ T+
Sbjct: 439 YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTM 498
Query: 209 VGLISGLWEPSLLSVG-QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL- 266
VG++S L+ G + + + + ++ + R ++ A ++ ++
Sbjct: 499 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 558
Query: 267 FHPDLVTWSAL-----ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F PD TW AL I G ++ G+ + + + + G VL++++ AA+ + +
Sbjct: 559 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMY---VLLSNLYAASGRWGD 615
Query: 322 V 322
V
Sbjct: 616 V 616
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 132/295 (44%), Gaps = 22/295 (7%)
Query: 146 VTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDE 205
TA K S ++ +D D+V N I+ G D +L+LF+ M R
Sbjct: 25 TTANRKPSTRNQPKTTSSLATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSI--- 81
Query: 206 YTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYARCNCMNSAYHVFN 264
+ +ISG LS + L + D VS +V++S R + +A +F+
Sbjct: 82 -SWNAMISG-----CLSNDKFYLARQLFEKMPTRDLVSWNVMISGCVRYRNLRAARLLFD 135
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+V+W+A+++GY+Q G +A F ++ + + + +LAA ++ +
Sbjct: 136 QMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCK----NSISWNGMLAAYVQNGRIED 191
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
+ + + ++ + ++ Y K L +F+ M ER+ +++N++I G
Sbjct: 192 ARRL----FESKADWELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQ 247
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
+G +A F E+ D T++A++ G++++ R +F M E+ +
Sbjct: 248 NGELLEAQRLF----EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSV 298
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 171/445 (38%), Gaps = 63/445 (14%)
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + + +T + + D A+++F+ + + N+MISG + + QLF+ M
Sbjct: 48 DIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSISWNAMISGCLSNDKFYLARQLFEKM- 106
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYARCNCM 256
T D + +ISG L + L D VS + ++S YA+ +
Sbjct: 107 ---PTRDLVSWNVMISGCVRYRNLRAAR-----LLFDQMPERDVVSWNAMLSGYAQNGYV 158
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA------ 310
A +F+ + + ++W+ ++ Y Q G A F KAD LI+
Sbjct: 159 KEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFE------SKADWELISWNCMMG 212
Query: 311 ------------SVLAAAAKSANVWPGAVIHGYV-------IQHGFELS----VMVSSAL 347
+ + V +I GY Q FE S V +A+
Sbjct: 213 GYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRLFEESPVRDVFTWTAM 272
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
V Y + G L +VF+ M E+N +++N++I G QA E F + + +
Sbjct: 273 VSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARELFEAMPCQNV---- 328
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
S+++ ++ G + R F RM + I + ++ +G EEA
Sbjct: 329 SSWNTMITGYAQNGDIAQARNFFDRMPQRDSIS-----WAAIIAGYAQSGYGEEALHLFV 383
Query: 468 SLPKP---VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY-KVMLSNTYAEDG 523
+ + ++ + + LS C +L + V ++ + G Y L Y + G
Sbjct: 384 EMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCG 443
Query: 524 RWDDVMKLRDDIVDNGLRKEAGVSW 548
DD IV G+ ++ VSW
Sbjct: 444 NIDDAY-----IVFEGIEEKEVVSW 463
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++H V KA L + L+ +Y + A I+F+ ++ V WN++I
Sbjct: 409 ALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIA 468
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
YA +A LF+++ +T + PD+ T + ACS + G + + G+
Sbjct: 469 GYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGIT 528
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPD-----LVLCNSMISGFAHCGFWDKSL 190
+S + ++ + +D+A + + +PD +L S I G G +K+
Sbjct: 529 ANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELG--EKAA 586
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
++ M PD + L+S L+ S
Sbjct: 587 KMIFEM-----EPDNSGMYVLLSNLYAAS 610
>gi|357504423|ref|XP_003622500.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497515|gb|AES78718.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 655
Score = 263 bits (673), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 154/548 (28%), Positives = 276/548 (50%), Gaps = 8/548 (1%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L++S L K+LHA + K + +++ +Y A+ LF++ P R+V
Sbjct: 67 LKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNV 126
Query: 70 FLWNSIIRAYALAHRFNDAK------SLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
WN +IRA + N++ S F+ +L + PD+ T+ + C++ +D+
Sbjct: 127 VSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLCTQFNDIEMG 186
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H + G D ALV Y+K ++ A +VF VS DLV+ N M+S +
Sbjct: 187 VQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCDVSCRDLVMWNVMVSCYVFN 246
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL--LSVGQGIHGFCLKSSFDSYDY 241
+++ ++F+ M DE+T L+S + + +L G+ +H L+ SFDS
Sbjct: 247 SLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDALEYYDFGKQVHSLVLRQSFDSDVL 306
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V+S L++MYA+ + A VF+ + ++V W+ +I G+ GD + + +++ +G
Sbjct: 307 VASALINMYAKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREG 366
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D + I+S++++ ++ + +H + ++ + + V+++L+ YSKCG +
Sbjct: 367 FLPDELTISSIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAF 426
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+ FE S+ +++T+ S+I HG ++ E F ++ G+ PD F +L AC H G
Sbjct: 427 KCFELTSQPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCG 486
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV G F MT Y I +EHY +V LLG G + EA+ + S+P VD GA
Sbjct: 487 LVTKGLHYFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAF 546
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
+ C ++ N +LA++ A +LF +P K ++SN +A W DV ++R + D
Sbjct: 547 IGSCKLHSNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDA 606
Query: 542 KEAGVSWV 549
K G SW+
Sbjct: 607 KVPGCSWI 614
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 60/114 (52%), Gaps = 6/114 (5%)
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
++ L +AK + G +H ++I+ GF + + + ++ +Y KC ++FE +
Sbjct: 64 SNALKISAKKGYLPEGKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPV 123
Query: 370 RNIITYNSVILG-LGLHGFTYQA-----FEFFRDIIEKGLNPDESTFSALLCAC 417
RN++++N +I +G + + F +FR ++ + + PD TF+ L+C C
Sbjct: 124 RNVVSWNIMIRASVGRNDENESSGMRLCFSYFRRMLLEMMVPDHITFNGLICLC 177
>gi|359484088|ref|XP_002263394.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic [Vitis vinifera]
Length = 762
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/498 (31%), Positives = 269/498 (54%), Gaps = 10/498 (2%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
L A+ +F L+NS+IRA + + +A L+ +L++ LKPD+ TY + +A
Sbjct: 145 LAYAKTIFHHLQNPPPSLYNSLIRALSSSKTPLEALPLYHTMLQSGLKPDHMTYPFVIKA 204
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C+E+S VH + SG DS S+L+ Y+ + A ++F+ S D+V
Sbjct: 205 CNESSVTWFGLLVHTHVVKSGFECDSYIVSSLIHLYANGKDLGAAKQLFNLCSARDVVSW 264
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+MI G+ + +FD M+ D + +I+G VG+ L
Sbjct: 265 NAMIDGYVKHVEMGHARMVFDRMV----CRDVISWNTMINGY-----AIVGKIDEAKRLF 315
Query: 234 SSFDSYDYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ VS + +++ + +C + A+ +F+ + D+V+W++++ Y+Q G +AL
Sbjct: 316 DEMPERNLVSWNSMLAGFVKCGNVEDAFGLFSEMPCRDVVSWNSMLACYAQCGKPNEALA 375
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ G K + S+L+A A + G +H Y+ + E++ +V +ALVDMY+
Sbjct: 376 LFDQMRAVGVKPTEATVVSLLSACAHLGALDKGLHLHTYINDNRIEVNSIVGTALVDMYA 435
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KCG + L QVF M ++++ +N++I G+ +HG +A + F+++ E G+ P++ TF A
Sbjct: 436 KCGKISLATQVFNAMESKDVLAWNTIIAGMAIHGNVKEAQQLFKEMKEAGVEPNDITFVA 495
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+L AC H G+V++G+++ M+ YGI+ K EHY ++ LL AG LEEA I ++P
Sbjct: 496 ILSACSHAGMVDEGQKLLDCMSSSYGIEPKVEHYGCVIDLLARAGFLEEAMELIGTMPME 555
Query: 473 VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
+P+ GALL C I+GN +L E+V +L P ++LSN YA +WDD K+R
Sbjct: 556 PNPSALGALLGGCRIHGNFELGEMVGKRLINLQPCHSGRYILLSNIYAAAKKWDDARKVR 615
Query: 533 DDIVDNGLRKEAGVSWVS 550
+ + NG+ K GVS +
Sbjct: 616 NLMKVNGISKVPGVSVIE 633
>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like, partial [Cucumis sativus]
Length = 658
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 261/494 (52%), Gaps = 1/494 (0%)
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
F + + + LWN+II+ Y + + ++ ++ +Q+ P+ FT+ + +AC S
Sbjct: 42 FREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE 101
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+ +HG G G + ++LV+ Y+K I A VFD + D +V S+ISG+
Sbjct: 102 GIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGY 161
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G ++L +F M + PD LV +++ L G+ IHG K +
Sbjct: 162 VQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEP 221
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+ L +MYA+ + A FN + P+L+ W+A+I+GY+ G +A+ FR++ +
Sbjct: 222 DIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK 281
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ D + + S + A+A+ ++ + GY+ + + V++ L+DMY+KCG + L
Sbjct: 282 NIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA 341
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
VF+ +++++++ ++ +I+G GLHG +A + ++ + G+ P++ TF LL AC +
Sbjct: 342 RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 401
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV +G E+F M ++GI+ +HY +V LLG AG L +AY FI S+P +V GA
Sbjct: 402 GLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGA 460
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLS C I+ L EI A QLF DP + V LSN YA W V +R + GL
Sbjct: 461 LLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGL 520
Query: 541 RKEAGVSWVSGSSN 554
K+ G S + + N
Sbjct: 521 NKDLGHSSIEINGN 534
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 175/395 (44%), Gaps = 34/395 (8%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H K + F LV +YA + ARI+FDK R+V W SII Y
Sbjct: 105 KQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQN 164
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A ++FK + + +KPD + A + DL + +HG GL +
Sbjct: 165 GDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIV 224
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+L T Y+K L++ A F+ + P+L+L N+MISG+A+ G+ +++++LF M+
Sbjct: 225 ISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIR 284
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D T+ + + L + + + G+ KS + +V++ L+ MYA+C + A V
Sbjct: 285 VDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCV 344
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D+V WS +I GY G +A+ + ++ G + +L A S V
Sbjct: 345 FDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLV 404
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G + + HG E S +VD+ + GYL
Sbjct: 405 KEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLN------------------------ 440
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
QA++F I+ + P S + ALL AC
Sbjct: 441 -------QAYDF---IMSMPIKPGVSVWGALLSAC 465
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
IVSGL + + A ++ A K F VS+PD++L N++I G+ D +
Sbjct: 11 IVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPI 70
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+++ M P+ +T + ++ S+ +G+ IHG K F S +V + LVSMY
Sbjct: 71 RMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMY 130
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+ ++ A VF+ L +V+W+++I+GY Q GD +AL F+++ K D + +
Sbjct: 131 AKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALV 190
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SV+ A ++ G IHG V + G E + +L MY+K G + + F M +
Sbjct: 191 SVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKP 250
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
N+I +N++I G +G+ +A + FR++I K + D T + + A G + R
Sbjct: 251 NLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR 307
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L + K +H LV K L +P L +YA ++ AR F++ + ++ LWN++I
Sbjct: 200 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMI 259
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA +A LF+ ++ ++ D+ T A ++ L R++ G S
Sbjct: 260 SGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYR 319
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ ++ L+ Y+K I A VFD V+D D+VL + MI G+ G +++ L++ M
Sbjct: 320 DDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEM 379
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P++ T +GL++ L+ G + + + S +V + R +
Sbjct: 380 KQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYL 439
Query: 257 NSAYHVFNSL-FHPDLVTWSALITG 280
N AY S+ P + W AL++
Sbjct: 440 NQAYDFIMSMPIKPGVSVWGALLSA 464
>gi|326494876|dbj|BAJ94557.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 783
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 156/526 (29%), Positives = 260/526 (49%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H + + D L+ LY + L AR LFD R++ W ++I Y
Sbjct: 258 RQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQN 317
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A S+F L + +PD F I +C + + R VH I + L D
Sbjct: 318 SLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVK 377
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y+K + EA VF+ +++ D + N+MI G+A G ++++F M
Sbjct: 378 NALIDMYAKCEHLTEARAVFEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLK 437
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P T V L+ S L + + IHG +KS Y S L+ +Y++ + ++ A V
Sbjct: 438 PSLLTFVSLLGVSSSRSDLELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLV 497
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + + D+V W+A+I G +Q +A+ F +L + G + +++ A+ A++
Sbjct: 498 FSLMQNRDMVIWNAMIFGLAQNERGEEAVKLFARLRVSGLTPNEFTFVALVTVASTLASI 557
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
+ G H +I+ G + +S+AL+DMY+KCG++ G +FE+ +++I +NS+I
Sbjct: 558 FHGQQFHAQIIKAGADSDPHISNALIDMYAKCGFIEEGRLLFESTLGKDVICWNSMISTY 617
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A F + G+ P+ TF ++L AC H GLV++G F M +Y ++
Sbjct: 618 AQHGHAEEALHVFGMMEGAGVEPNYVTFVSVLSACAHAGLVDEGLHHFNSMKTKYAVEPG 677
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
TEHY +V L G +G L A FI +P + +LLS CH++GN ++
Sbjct: 678 TEHYASVVNLFGRSGKLHAAKEFIERMPIEPVATIWRSLLSACHLFGNVEIGRYATEMAL 737
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
DP V++SN YA G W D KLR + G+ KE G SW
Sbjct: 738 LADPADSGPSVLMSNIYASKGLWADAQKLRQGMDCAGVVKEPGYSW 783
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 193/395 (48%), Gaps = 6/395 (1%)
Query: 26 HALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRF 85
HA + LL D F A L+R Y+ L AR LFD P R++ W S I YA R
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 86 NDAKSLFKNLLRTQL------KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+DA LF P+ F A RAC+++ VHG A GL +
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ALV Y+K ID A+ VFD + + V ++I+G++ G +L+LF M
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD + L S + G+ IHG+ +++ +S V + L+ +Y +C+ + A
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F+S+ + +LV+W+ +I GY Q +A+ F +L+ G + D S+L +
Sbjct: 293 RRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSL 352
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
A +W G +H +VI+ E V +AL+DMY+KC +L VFE ++E + I+YN++I
Sbjct: 353 AAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAVFEALAEDDAISYNAMI 412
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
G G A E F + L P TF +LL
Sbjct: 413 EGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLL 447
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/392 (28%), Positives = 200/392 (51%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H + AK L + F T LV LYA + +A +FD P R+ W ++I Y+ A
Sbjct: 157 EQVHGVAAKLGLDANVFVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQA 216
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A LF + ++PD F A ACS + G R +HG A + D+
Sbjct: 217 GQAGVALELFGRMGLDGVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVV 276
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y K S + A ++FD + + +LV +MI+G+ +++ +F + + G
Sbjct: 277 NALIDLYCKCSRLLLARRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQ 336
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD + +++ + + G+ +H +K+ +S +YV + L+ MYA+C + A V
Sbjct: 337 PDVFACTSILNSCGSLAAIWQGRQVHAHVIKADLESDEYVKNALIDMYAKCEHLTEARAV 396
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F +L D ++++A+I GY++ GD A+ F K+ K + S+L ++ +++
Sbjct: 397 FEALAEDDAISYNAMIEGYARLGDLTGAVEIFGKMRYCSLKPSLLTFVSLLGVSSSRSDL 456
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
IHG +++ G L + SAL+D+YSK + VF M R+++ +N++I GL
Sbjct: 457 ELSKQIHGLIVKSGTSLDLYAGSALIDVYSKFSLVDDAKLVFSLMQNRDMVIWNAMIFGL 516
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ +A + F + GL P+E TF AL+
Sbjct: 517 AQNERGEEAVKLFARLRVSGLTPNEFTFVALV 548
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 161/309 (52%), Gaps = 6/309 (1%)
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H A+VSGL D ++ L+ YSKL + +A ++FD + +LV S IS +A G
Sbjct: 53 HARAVVSGLLPDLFLANLLLRGYSKLGRLGDARRLFDSMPSRNLVSWGSAISMYAQHGRE 112
Query: 187 DKSLQLFDWMLRLG------KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
D +L LF G + P+E+ L + + G+ +HG K D+
Sbjct: 113 DDALLLFAAFPSAGAASPDGEPPNEFLLASALRACAQSRAARFGEQVHGVAAKLGLDANV 172
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+V + LV++YA+ +++A VF++L + VTW+A+ITGYSQ G G AL F ++ +
Sbjct: 173 FVGTALVNLYAKAGRIDAAMSVFDALPARNPVTWTAVITGYSQAGQAGVALELFGRMGLD 232
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + D ++AS +A + V G IHGY + E V +AL+D+Y KC L L
Sbjct: 233 GVRPDRFVLASAASACSGLGFVEGGRQIHGYAYRTAAESDASVVNALIDLYCKCSRLLLA 292
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++F++M RN++++ ++I G + +A F + + G PD +++L +C
Sbjct: 293 RRLFDSMENRNLVSWTTMIAGYMQNSLDTEAMSMFWQLSQAGWQPDVFACTSILNSCGSL 352
Query: 421 GLVNDGREI 429
+ GR++
Sbjct: 353 AAIWQGRQV 361
>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 823
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 162/512 (31%), Positives = 263/512 (51%), Gaps = 12/512 (2%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ ++A N L +AR +F+ +R+V +W +I Y A LF +L +PD
Sbjct: 189 LIDMFARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPD 248
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIK 160
+T + + AC+E + +H + GL D+ S LV Y+KL + ++ A K
Sbjct: 249 GYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARK 308
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDK-SLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
VF + +++ ++ISG+ CG + +++L ML P+ T L+ S
Sbjct: 309 VFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLS 368
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
G+ IH +K+S + + V + LVSMYA CM A F+ L+ +L++ S+ I
Sbjct: 369 DQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDI- 427
Query: 280 GYSQQGDYGKA-LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
G+ G++ + ++ AS+L+AAA G +H I+ GFE
Sbjct: 428 -----GETGRSNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFE 482
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRD 397
+S++LV MYS+CGYL + F+ M + N+I++ S+I L HG +A F D
Sbjct: 483 SDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHD 542
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAG 457
+I G+ P++ T+ A+L AC H GLV +G+E F M +++ + + EHY MV LL +G
Sbjct: 543 MILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACMVDLLARSG 602
Query: 458 NLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
++EA FI +P D V LL C Y N ++ EI A + + +P+ A V+LSN
Sbjct: 603 LVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDPAPYVLLSN 662
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA G WD+V ++R + L KE G+SW+
Sbjct: 663 LYAHGGLWDEVARIRSLMRHRNLSKETGLSWM 694
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 211/497 (42%), Gaps = 55/497 (11%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQ-RSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
D A L+ +Y+ + +AR +FD R + W ++ +A L +
Sbjct: 78 DALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLLGEM 137
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL-------GRDSITSSALVTA 148
L + L+P+ FT AC PG F G V G G D AL+
Sbjct: 138 LESGLRPNAFTLCAAAHAC-----FPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDM 192
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
+++ + A KVF+G+ + +V+ MI+ + G K+++LF ML G PD YT+
Sbjct: 193 FARNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTM 252
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC---NCMNSAYHVFNS 265
++S E +GQ +H L+ S VS LV MY + M A VF
Sbjct: 253 SSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKR 312
Query: 266 LFHPDLVTWSALITGYSQ-QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ ++++W+ALI+GY Q G A+ ++ + + + + +S+L A A ++
Sbjct: 313 MPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDS 372
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI----- 379
G IH V++ +V +ALV MY++ G + + F+ + ERN+++ +S I
Sbjct: 373 GRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETGR 432
Query: 380 -----------LGLGLHGFTYQAF--------------EFFRDIIEKGLNPDESTFSALL 414
+ +G+ FT+ + + I+ G D+ ++L+
Sbjct: 433 SNASWSSQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLV 492
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF----IWSLP 470
G ++D F M +++ + + T ++ L G+ E A S I S
Sbjct: 493 SMYSRCGYLDDACRAFDEMEDDHNVISWTS----IISALAKHGHAERALSLFHDMILSGV 548
Query: 471 KPVDPAVSGALLSCCHI 487
KP D L +C H+
Sbjct: 549 KPNDVTYIAVLSACSHV 565
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 91/308 (29%), Positives = 153/308 (49%), Gaps = 7/308 (2%)
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLF 193
L D++ +++L+T YSK + A +VFDG+ DLV +M G ++L L
Sbjct: 75 LDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFCLTRNGAEQEALVLL 134
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLL-SVGQGIHGFCLKSSFDSYDY-VSSVLVSMYA 251
ML G P+ +TL + L S G + GF +K+ F D V L+ M+A
Sbjct: 135 GEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWGTDVSVGCALIDMFA 194
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
R + +A VFN L +V W+ +IT Y Q G GKA+ F + G + D ++S
Sbjct: 195 RNGDLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLGMLEDGFEPDGYTMSS 254
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY---LGLGIQVFETMS 368
+++A A+ + G +H V++ G VS LVDMY+K + +VF+ M
Sbjct: 255 MVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQMEQSMECARKVFKRMP 314
Query: 369 ERNIITYNSVILG-LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
N++++ ++I G + G A E +++ + + P+ T+S+LL AC + + GR
Sbjct: 315 THNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSSLLKACANLSDQDSGR 374
Query: 428 EIFTRMTE 435
+I R+ +
Sbjct: 375 QIHARVMK 382
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++HA V K S+ LV +YA + + AR FD+ +R++ +S I
Sbjct: 374 RQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERNLLSTSSDIGETG-- 431
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R N + S + + FT+A + A + + +H +I +G D S
Sbjct: 432 -RSNASWS--SQIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHALSIKTGFESDKGIS 488
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLC-NSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++LV+ YS+ +D+A + FD + D V+ S+IS A G +++L LF M+ G
Sbjct: 489 NSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAERALSLFHDMILSGV 548
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQ 225
P++ T + ++S L+ G+
Sbjct: 549 KPNDVTYIAVLSACSHVGLVKEGK 572
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP-QRSVFLWNSIIRA 78
++ ++LHAL K D + LV +Y+ L A FD+ +V W SII A
Sbjct: 467 TKGQQLHALSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISA 526
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A A SLF +++ + +KP++ TY + ACS
Sbjct: 527 LAKHGHAERALSLFHDMILSGVKPNDVTYIAVLSACS 563
>gi|296089801|emb|CBI39620.3| unnamed protein product [Vitis vinifera]
Length = 591
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 247/477 (51%), Gaps = 2/477 (0%)
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
+I Y + A +F ++ +L P+ FT + + +AC L R VHG AI G
Sbjct: 64 MIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKGMKCLSYGRLVHGLAIKHG 123
Query: 135 LGRDSITSSALVTAYSKLSL-IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
L +AL+ Y+ + +D+A VF G+ + V ++I+G+ H L++F
Sbjct: 124 LDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTTLIAGYTHRDDGYGGLRVF 183
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
ML + ++ + + G+ +H K F+S V + ++ MY RC
Sbjct: 184 RQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTKHGFESNLPVMNSILDMYCRC 243
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+C + A F + DL+TW+ LI GY ++ + ++LY F + +G + S++
Sbjct: 244 SCFSEANRYFYEMNQRDLITWNTLIAGY-ERSNPTESLYVFSMMESEGFSPNCFTFTSIM 302
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
AA A A + G IHG +I+ G + ++ +S+AL+DMYSKCG + QVF MS R+++
Sbjct: 303 AACATLAFLNCGQQIHGRIIRRGLDGNLALSNALIDMYSKCGNIADSHQVFGGMSRRDLV 362
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++ ++++G G HG+ +A E F ++ G+ PD F A+L AC H GLV++G F M
Sbjct: 363 SWTAMMIGYGTHGYGEEAVELFDKMVRSGIRPDRVVFMAILSACSHAGLVDEGLRYFKLM 422
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
+Y I E Y +V LLG AG +EEAY I S+P D V G L C + +L
Sbjct: 423 VGDYNISPDQEIYGCVVDLLGRAGKVEEAYELIESMPFKPDECVWGPFLGACKAHTFPNL 482
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
++ AH++ + P VMLSN YA DG+W + +LR + G +KE G SWV
Sbjct: 483 GKLAAHRILDLRPHMAGTYVMLSNIYAADGKWGEFARLRKLMKRMGNKKETGRSWVE 539
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 82/178 (46%), Gaps = 1/178 (0%)
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A + S F L+ + +I GY+ ++ A F ++ + + I+SVL A
Sbjct: 46 ATTLIKSYFGKGLIGEALMIAGYTSCNNHTHAWMVFCEMMNEELDPNAFTISSVLKACKG 105
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY-LGLGIQVFETMSERNIITYNS 377
+ G ++HG I+HG + + V +AL+DMY+ C + VF + +N +++ +
Sbjct: 106 MKCLSYGRLVHGLAIKHGLDGFIYVDNALMDMYATCCVSMDDACMVFRGIHLKNEVSWTT 165
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+I G Y FR ++ + + + +FS + AC G G ++ +T+
Sbjct: 166 LIAGYTHRDDGYGGLRVFRQMLLEEVELNPFSFSIAVRACTSIGSHTFGEQLHAAVTK 223
>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g12770-like [Cucumis sativus]
Length = 673
Score = 263 bits (672), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 153/494 (30%), Positives = 261/494 (52%), Gaps = 1/494 (0%)
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
F + + + LWN+II+ Y + + ++ ++ +Q+ P+ FT+ + +AC S
Sbjct: 57 FREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVE 116
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+ +HG G G + ++LV+ Y+K I A VFD + D +V S+ISG+
Sbjct: 117 GIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGY 176
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G ++L +F M + PD LV +++ L G+ IHG K +
Sbjct: 177 VQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEP 236
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+ L +MYA+ + A FN + P+L+ W+A+I+GY+ G +A+ FR++ +
Sbjct: 237 DIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITK 296
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ D + + S + A+A+ ++ + GY+ + + V++ L+DMY+KCG + L
Sbjct: 297 NIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLA 356
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
VF+ +++++++ ++ +I+G GLHG +A + ++ + G+ P++ TF LL AC +
Sbjct: 357 RCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNS 416
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV +G E+F M ++GI+ +HY +V LLG AG L +AY FI S+P +V GA
Sbjct: 417 GLVKEGWELFHLMP-DHGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGA 475
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLS C I+ L EI A QLF DP + V LSN YA W V +R + GL
Sbjct: 476 LLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRVANVRLMMTQKGL 535
Query: 541 RKEAGVSWVSGSSN 554
K+ G S + + N
Sbjct: 536 NKDLGHSSIEINGN 549
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 175/395 (44%), Gaps = 34/395 (8%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H K + F LV +YA + ARI+FDK R+V W SII Y
Sbjct: 120 KQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQN 179
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+A ++FK + + +KPD + A + DL + +HG GL +
Sbjct: 180 GDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIV 239
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+L T Y+K L++ A F+ + P+L+L N+MISG+A+ G+ +++++LF M+
Sbjct: 240 ISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIR 299
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
D T+ + + L + + + G+ KS + +V++ L+ MYA+C + A V
Sbjct: 300 VDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCV 359
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D+V WS +I GY G +A+ + ++ G + +L A S V
Sbjct: 360 FDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLV 419
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G + + HG E S +VD+ + GYL
Sbjct: 420 KEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLN------------------------ 455
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
QA++F I+ + P S + ALL AC
Sbjct: 456 -------QAYDF---IMSMPIKPGVSVWGALLSAC 480
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 150/297 (50%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
IVSGL + + A ++ A K F VS+PD++L N++I G+ D +
Sbjct: 26 IVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPI 85
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
+++ M P+ +T + ++ S+ +G+ IHG K F S +V + LVSMY
Sbjct: 86 RMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMY 145
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+ ++ A VF+ L +V+W+++I+GY Q GD +AL F+++ K D + +
Sbjct: 146 AKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALV 205
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SV+ A ++ G IHG V + G E + +L MY+K G + + F M +
Sbjct: 206 SVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKP 265
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
N+I +N++I G +G+ +A + FR++I K + D T + + A G + R
Sbjct: 266 NLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELAR 322
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 124/265 (46%), Gaps = 1/265 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+ L + K +H LV K L +P L +YA ++ AR F++ + ++ LWN++I
Sbjct: 215 EDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMI 274
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA +A LF+ ++ ++ D+ T A ++ L R++ G S
Sbjct: 275 SGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYR 334
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D+ ++ L+ Y+K I A VFD V+D D+VL + MI G+ G +++ L++ M
Sbjct: 335 DDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEM 394
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+ G P++ T +GL++ L+ G + + + S +V + R +
Sbjct: 395 KQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYL 454
Query: 257 NSAYHVFNSL-FHPDLVTWSALITG 280
N AY S+ P + W AL++
Sbjct: 455 NQAYDFIMSMPIKPGVSVWGALLSA 479
>gi|297839333|ref|XP_002887548.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
gi|297333389|gb|EFH63807.1| hypothetical protein ARALYDRAFT_339650 [Arabidopsis lyrata subsp.
lyrata]
Length = 1221
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 271/530 (51%), Gaps = 43/530 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALN--NVLPSARILFDKTPQRSVFLWNS 74
++L ++H K+ + D ++ KL+ A++ + LP AR L P+ F++N+
Sbjct: 183 KNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPEPDAFMFNT 242
Query: 75 IIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
++R Y+ + +++ ++F ++R + PD+F++A + +A + L +H A+
Sbjct: 243 LVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQMHCQALKH 302
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
GL ++ L+ Y + + A KVFD + P+LV N++++ + ++F
Sbjct: 303 GLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGNDVSGAREIF 362
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
D ML T W +V+++ Y +
Sbjct: 363 DKMLVRNHTS------------W---------------------------NVMLAGYIKA 383
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ A +F+ + H D V+WS +I G+S G + ++ YFR+L + + V + VL
Sbjct: 384 GELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPNEVSLTGVL 443
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNI 372
+A ++S G +HG+V + G+ V V++AL+DMYS+CG + + VFE M E R+I
Sbjct: 444 SACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRSI 503
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++ S+I GL +HG +A F ++ E G+ PDE +F +LL AC H GL+ +G F++
Sbjct: 504 VSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDEISFISLLYACSHAGLIKEGEGYFSK 563
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
M Y I+ EHY MV L G +G L++AYSFI +P P V LL C +GN +
Sbjct: 564 MKRVYHIEPAVEHYGCMVDLYGRSGKLQKAYSFICQMPIPPTAIVWRTLLGACSSHGNIE 623
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
LAE V +L E DP V+LSN YA G+W DV +R ++ ++K
Sbjct: 624 LAEQVKQRLNELDPNNSGDLVLLSNVYATAGKWKDVASIRKSMIVQRIKK 673
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 157/355 (44%), Gaps = 47/355 (13%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
V++ + + +SL ++H K L F AT L+ +Y + AR +FD+ PQ
Sbjct: 278 FVVKAAANFRSLRTGFQMHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQP 337
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
++ WN+++ AC +D+ G R +
Sbjct: 338 NLVAWNAVV-----------------------------------TACFRGNDVSGAREIF 362
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+V R+ + + ++ Y K ++ A ++F + D V ++MI GF+H G ++
Sbjct: 363 DKMLV----RNHTSWNVMLAGYIKAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFN 418
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+S F +LR P+E +L G++S + G+ +HGF KS + V++ L+
Sbjct: 419 ESFSYFRELLRAEMRPNEVSLTGVLSACSQSGAFEFGKTLHGFVEKSGYSWIVSVNNALI 478
Query: 248 SMYARCNCMNSAYHVFNSLFHP-DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
MY+RC + A VF + +V+W+++I G + G +A+ F ++ G D
Sbjct: 479 DMYSRCGNVPMARLVFEGMQEKRSIVSWTSMIAGLAMHGHGEEAIRIFNEMTESGVMPDE 538
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQ----HGFELSVMVSSALVDMYSKCGYL 357
+ S+L A + + + G GY + + E +V +VD+Y + G L
Sbjct: 539 ISFISLLYACSHAGLIKEG---EGYFSKMKRVYHIEPAVEHYGCMVDLYGRSGKL 590
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 142/323 (43%), Gaps = 42/323 (13%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALV--TAYSKLSLIDEAIKVFDGVSD 167
ITR +L L +HG I SG+ DS L+ A S + A ++ +
Sbjct: 175 ITRKDQYCKNLRALTQIHGFFIKSGVDTDSYFIGKLILHCAISISDALPYARRLLLCFPE 234
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQG 226
PD + N+++ G++ S+ +F M+R G PD ++ ++ L G
Sbjct: 235 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFIFPDSFSFAFVVKAAANFRSLRTGFQ 294
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+H LK DS+ +V++ L+ MY C C+ A VF+ + P+LV W+A++T + D
Sbjct: 295 MHCQALKHGLDSHLFVATTLIGMYGECGCVGFARKVFDEMPQPNLVAWNAVVTACFRGND 354
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
A F K+ ++ + V++A GY+
Sbjct: 355 VSGAREIFDKMLVRNHTSWNVMLA-------------------GYI-------------- 381
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
K G L ++F M R+ ++++++I+G +G ++F +FR+++ + P+
Sbjct: 382 ------KAGELECAKRIFSEMPHRDDVSWSTMIVGFSHNGSFNESFSYFRELLRAEMRPN 435
Query: 407 ESTFSALLCACCHGGLVNDGREI 429
E + + +L AC G G+ +
Sbjct: 436 EVSLTGVLSACSQSGAFEFGKTL 458
>gi|225462555|ref|XP_002267326.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
mitochondrial-like [Vitis vinifera]
Length = 708
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 158/534 (29%), Positives = 267/534 (50%), Gaps = 3/534 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L+ +++H L+ ++ + L+ +Y N A +FD+ + + WN++
Sbjct: 174 NLNFGRQIHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFA 233
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
+ + F L+ T LKP+ T++ + R C E DL GL+F H A G+
Sbjct: 234 GLSQGDDAREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQF-HCLAFRFGIS 292
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
++ +S+L+ +S+ + A VFD + CN MISG+ ++L LF +
Sbjct: 293 DEASVTSSLINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNL 352
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
LG DE T + + +G+ +HG +KS F S YV S L+ Y +
Sbjct: 353 NGLGLEADECTFSSALEACFRTENQKLGRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLL 412
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
+ ++ FN + DLV+W A+I+ +G +A+ +L G K D + S+
Sbjct: 413 DDSFEFFNGVERLDLVSWGAMISALVHKGYSSEAIGLLNRLKEAGGKPDEFIFGSIFNCC 472
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE-RNIITY 375
A A +H V++ G+E V V+SA++D Y+KCG + +VF+ S R++I +
Sbjct: 473 AGIAAYRQTKSVHSLVVKMGYEAHVFVASAVIDAYAKCGDIENARRVFDQTSRFRDVILF 532
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
N++++ HG +A E F + L P ++TF +++ AC H GLV G F M
Sbjct: 533 NTMVMAYAHHGLVREAVETFEKMKLATLEPSQATFVSVISACSHLGLVEQGDIFFKSMNL 592
Query: 436 EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAE 495
+YG+ ++Y +V L G LE+A I ++P P PA+ +LL+ C I+GN +L E
Sbjct: 593 DYGMDPSPDNYGCLVDLFSRNGFLEDAKHIIETMPFPPWPAIWRSLLNGCRIHGNKELGE 652
Query: 496 IVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A +L + P A V+LS Y+E+G W D K+R +++ GL K+ G SW+
Sbjct: 653 WAAKKLLQLVPENDAAYVLLSKVYSEEGSWSDAAKVRKGMIERGLWKDPGCSWI 706
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 179/371 (48%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y L +F + P +++ W ++ F ++ ++RT L P+ F
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
C+T+AC+ VH A+ G+ ++ S+++ Y+KL I++A +VF+ +
Sbjct: 61 LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
+ + N+MI G+A C + +SL++ M G + D +T + + G L+ G+
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IHG ++S V + L+ MY + A VF+ L D+++W+ + G SQ D
Sbjct: 181 IHGLIIQSEVGFSTAVMNSLMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDD 240
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ +F KL + G K + V + + ++ ++ G H + G V+S+
Sbjct: 241 AREIGRFFHKLMLTGLKPNCVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSS 300
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L++M+S+CG + + VF++ ++I T N +I G L+ +A F ++ GL D
Sbjct: 301 LINMFSRCGAMRMACLVFDSAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEAD 360
Query: 407 ESTFSALLCAC 417
E TFS+ L AC
Sbjct: 361 ECTFSSALEAC 371
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 176/396 (44%), Gaps = 1/396 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H K + ++PF + ++ +YA + A +F+ V WN++I YA
Sbjct: 80 VHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMDNLVVGCWNAMIGGYAQCSY 139
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
++ + + + D FT+ + C +L R +HG I S +G + ++
Sbjct: 140 GFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQIHGLIIQSEVGFSTAVMNS 199
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K A+KVFD + D D++ N++ +G + + + F ++ G P+
Sbjct: 200 LMDMYFKNGGGLYALKVFDRLQDKDIISWNTVFAGLSQGDDAREIGRFFHKLMLTGLKPN 259
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
T L E L G H + V+S L++M++RC M A VF+
Sbjct: 260 CVTFSILFRFCGEALDLVSGLQFHCLAFRFGISDEASVTSSLINMFSRCGAMRMACLVFD 319
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
S + T + +I+GY+ +AL F LN G +AD +S L A ++ N
Sbjct: 320 SAPFKSIHTCNEMISGYNLNCHNAEALNLFCNLNGLGLEADECTFSSALEACFRTENQKL 379
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +HG +++ GF V S+L+ Y G L + F + +++++ ++I L
Sbjct: 380 GRQMHGTIVKSGFASQGYVCSSLLKCYVGFGLLDDSFEFFNGVERLDLVSWGAMISALVH 439
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
G++ +A + E G PDE F ++ CC G
Sbjct: 440 KGYSSEAIGLLNRLKEAGGKPDEFIFGSIF-NCCAG 474
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 87/181 (48%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MY +C + VF + +LV+W+ +++G Q G++ L + ++ G +
Sbjct: 1 MYTKCGFLAGGLKVFGEMPMKNLVSWTLVVSGAVQNGEFEMGLGVYLEMIRTGLVPNEFA 60
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
+ V A A G +H + ++ G E + V S++++MY+K G + +VFE M
Sbjct: 61 LGCVTKACAALGGKELGLCVHCFALKVGMEKNPFVGSSILNMYAKLGDIEDAERVFECMD 120
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ +N++I G + +++ + + KG++ D TF L C G +N GR+
Sbjct: 121 NLVVGCWNAMIGGYAQCSYGFESLKIVSVMQYKGISMDAFTFINALKGCLVVGNLNFGRQ 180
Query: 429 I 429
I
Sbjct: 181 I 181
>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
Length = 1021
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 274/536 (51%), Gaps = 3/536 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL +++H + K + D F A ++ +Y+ + A+ LF P + WN++I
Sbjct: 440 SLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIV 499
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A +A ++ K + + D ++A ACS + + +H +I +
Sbjct: 500 GLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCS 559
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ S+L+ YSK ++ + KV V +V N++I+G D++++LF +L
Sbjct: 560 NHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVL 619
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-LVSMYARCNCM 256
+ G P +T ++SG P +G+ +H + LKS+ + D + LV +Y +C +
Sbjct: 620 KDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLL 679
Query: 257 NSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
A + + H +LV W+A I+GY+Q G ++L F ++ ++D SVL A
Sbjct: 680 EDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKA 739
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIIT 374
++ A + G IHG +++ GF +SAL+DMYSKCG + ++F+ + R NI+
Sbjct: 740 CSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQNIMP 799
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS+I+G +G+ +A F+ + E + PD+ T +L AC H GL+++G F M+
Sbjct: 800 WNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAGLISEGLHFFDSMS 859
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+ YGI + +HY ++ LLG G+L++A I LP D + L+ C ++ + +
Sbjct: 860 QVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATYLAACQMHKDEERG 919
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
++ A +L E +P+ + V LS+ +A G W + R+ + + G+ K G SW++
Sbjct: 920 KVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVMKFPGCSWIT 975
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 213/446 (47%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
L + + K + D ++ A L AR L + S WN++I +Y+ +
Sbjct: 245 LFSRMEKMGSVPDQVTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGL 304
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
++ L+K++ + L P T+A I A + + R +H A+ GL + S+
Sbjct: 305 DSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSS 364
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K I +A KVFD ++ ++V+ N+++ GF ++++Q+F +M R D
Sbjct: 365 LINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEAD 424
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++T V ++ L +G+ +H +K+ D+ +V++ ++ MY++ ++ A +F+
Sbjct: 425 DFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFS 484
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D V+W+ALI G + + G+A+ +++ G D V A+ + A + +
Sbjct: 485 LIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIET 544
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G IH I++ + V S+L+D+YSK G + +V + +I+ N++I GL
Sbjct: 545 GKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDASSIVPINALITGLVQ 604
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
+ +A E F+ +++ G P TF+++L C G+++ + + T
Sbjct: 605 NNREDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTS 664
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLP 470
I +V + LE+A + +P
Sbjct: 665 LGISLVGIYLKCKLLEDANKLLEEVP 690
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 198/423 (46%), Gaps = 2/423 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + + + +++HA K L + F + L+ LY + + A+ +FD + +++
Sbjct: 330 ILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 389
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +WN+I+ + + +F+ + R L+ D+FT+ + AC L R VH
Sbjct: 390 IVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHC 449
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I +G+ D ++A++ YSKL ID A +F + D V N++I G AH +
Sbjct: 450 ITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGE 509
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ + M G DE + I+ + G+ IH +K + S V S L+
Sbjct: 510 AINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLID 569
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
+Y++ + S+ V + +V +ALITG Q +A+ F+++ G K
Sbjct: 570 LYSKFGDVESSRKVLAHVDASSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFT 629
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
S+L+ + + G +H Y ++ + +LV +Y KC L ++ E +
Sbjct: 630 FTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLGISLVGIYLKCKLLEDANKLLEEV 689
Query: 368 SE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ +N++ + + I G +G++ Q+ F + + DE+TF+++L AC + DG
Sbjct: 690 PDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDVRSDEATFTSVLKACSEMAALTDG 749
Query: 427 REI 429
+EI
Sbjct: 750 KEI 752
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 154/328 (46%), Gaps = 35/328 (10%)
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD F A + ACS L R VH + SG + LV Y+K +D+A ++
Sbjct: 155 PDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRM 214
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FDG++ PD + SMI+G+ G + ++L LF M ++G PD+ T V +IS +L
Sbjct: 215 FDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTIIS-----TLA 269
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
S+G+ + A + + V W+A+I Y
Sbjct: 270 SMGR------------------------------LGDARTLLKRIRMTSTVAWNAVIASY 299
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
SQ G + ++ + QG AS+L+AAA G IH ++HG + +V
Sbjct: 300 SQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANV 359
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
V S+L+++Y K G + +VF+ +E+NI+ +N+++ G + + + F+ +
Sbjct: 360 FVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRA 419
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREI 429
L D+ TF ++L AC + ++ GR++
Sbjct: 420 DLEADDFTFVSVLGACINLYSLDLGRQV 447
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 180/414 (43%), Gaps = 35/414 (8%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L +++H V K+ F LV +YA + AR +FD W S+I
Sbjct: 172 ALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIA 231
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y R+ A +LF + + PD T C+T
Sbjct: 232 GYHRVGRYQQALALFSRMEKMGSVPDQVT--CVT-------------------------- 263
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+++ + + + +A + + V N++I+ ++ G + L+ M
Sbjct: 264 -------IISTLASMGRLGDARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMK 316
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G P T ++S + G+ IH +K D+ +V S L+++Y + C++
Sbjct: 317 KQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCIS 376
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+ ++V W+A++ G+ Q + + F+ + +AD SVL A
Sbjct: 377 DAKKVFDFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACI 436
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ G +H I++G + + V++A++DMYSK G + + +F + ++ +++N+
Sbjct: 437 NLYSLDLGRQVHCITIKNGMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVKDSVSWNA 496
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+I+GL + +A + + G+ DE +F+ + AC + + G++I +
Sbjct: 497 LIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHS 550
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 105/231 (45%), Gaps = 35/231 (15%)
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+G TPD++ + ++S L G+ +H LKS F S + + LV MYA+C ++
Sbjct: 151 IGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDD 210
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+ + PD + W+++I GY + G Y +AL F ++ G D V +++
Sbjct: 211 ARRMFDGIACPDTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQVTCVTII----- 265
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S L M G LG + + + + + +N+V
Sbjct: 266 --------------------------STLASM----GRLGDARTLLKRIRMTSTVAWNAV 295
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
I G + F ++D+ ++GL P STF+++L A + ++GR+I
Sbjct: 296 IASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQI 346
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQR 67
VL+ +L+ KE+H L+ K+ + + L+ +Y+ +V+ S I + ++
Sbjct: 736 VLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFEIFKELKNRQ 795
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
++ WNS+I +A N+A LF+ + +Q+KPD+ T + ACS H
Sbjct: 796 NIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACS-----------H 844
Query: 128 GGAIVSGL 135
G I GL
Sbjct: 845 AGLISEGL 852
>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 763
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/503 (29%), Positives = 263/503 (52%), Gaps = 16/503 (3%)
Query: 48 YALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTY 107
YA N + AR +F+K P R+ WN ++ AY R +A+ LF++ +L ++
Sbjct: 149 YAQNGFVDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWEL----ISW 204
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
C+ + + L R + V RD I+ + +++ Y+++ + +A ++F+
Sbjct: 205 NCLMGGYVKRNMLGDARQLFDRMPV----RDVISWNTMISGYAQVGDLSQAKRLFNESPI 260
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
D+ +M+SG+ G D++ + FD M +E + +++G + + + +
Sbjct: 261 RDVFTWTAMVSGYVQNGMVDEARKYFDEM----PVKNEISYNAMLAGYVQYKKMVIAGEL 316
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
+ S++ +++ Y + + A +F+ + D V+W+A+I+GY+Q G Y
Sbjct: 317 FEAMPCRNISSWN----TMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHY 372
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
+AL F ++ G+ ++ + L+ A A + G +HG V++ GFE V +AL
Sbjct: 373 EEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFVGNAL 432
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+ MY KCG VFE + E++++++N++I G HGF QA F + + G+ PDE
Sbjct: 433 LGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDE 492
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
T +L AC H GL++ G E F M +Y ++ ++HY M+ LLG AG LEEA + +
Sbjct: 493 ITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAENLMR 552
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
++P A GALL I+GN++L E A +F+ +P+ V+LSN YA GRW D
Sbjct: 553 NMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVD 612
Query: 528 VMKLRDDIVDNGLRKEAGVSWVS 550
V K+R + + G++K G SWV
Sbjct: 613 VGKMRSKMREAGVQKVTGYSWVE 635
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 143/291 (49%), Gaps = 18/291 (6%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+RD ++ YA L A+ LF+++P R VF W +++ Y ++A+ F
Sbjct: 229 VRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGMVDEARKYFDE 288
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGL----RFVHGGAIVSGLGRDSITS-SALVTAY 149
+ + S N+ L G + V G + + +I+S + ++T Y
Sbjct: 289 MP-------------VKNEISYNAMLAGYVQYKKMVIAGELFEAMPCRNISSWNTMITGY 335
Query: 150 SKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV 209
+ I +A K+FD + D V ++ISG+A G ++++L +F M R G++ + T
Sbjct: 336 GQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSNRSTFS 395
Query: 210 GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
+S + + L +G+ +HG +K+ F++ +V + L+ MY +C + A VF +
Sbjct: 396 CALSTCADIAALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEK 455
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
D+V+W+ +I GY++ G +AL F + G K D + + VL+A + S
Sbjct: 456 DVVSWNTMIAGYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACSHSG 506
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/443 (20%), Positives = 189/443 (42%), Gaps = 88/443 (19%)
Query: 20 SRTKELHALVAKASLLRDPFYAT--KLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ + ++ + +DP T K + + N SA +F+ P+RS +N++I
Sbjct: 26 SKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGHCDSALRVFNSMPRRSSVSYNAMIS 85
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y +F+ A+ LF + P+ R
Sbjct: 86 GYLRNAKFSLARDLFDKM------PE---------------------------------R 106
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM- 196
D + + ++T Y + + EA K+FD + D+V N+M+SG+A GF D++ ++F+ M
Sbjct: 107 DLFSWNVMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMP 166
Query: 197 -----------------------LRLGKTPDEYTLVG---LISGLWEPSLLSVGQGIHGF 230
RL ++ + L+ L+ G + ++L + +
Sbjct: 167 HRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMGGYVKRNMLGDARQL--- 223
Query: 231 CLKSSFDSY---DYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
FD D +S + ++S YA+ ++ A +FN D+ TW+A+++GY Q G
Sbjct: 224 -----FDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIRDVFTWTAMVSGYVQNGM 278
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+A YF ++ ++ + + ++A + + VI G + + ++ +
Sbjct: 279 VDEARKYFDEMPVKNEISYNAMLAGYVQ--------YKKMVIAGELFEAMPCRNISSWNT 330
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
++ Y + G + ++F+ M +R+ +++ ++I G +G +A F ++ G + +
Sbjct: 331 MITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQNGHYEEALNMFVEMKRDGESSN 390
Query: 407 ESTFSALLCACCHGGLVNDGREI 429
STFS L C + G+++
Sbjct: 391 RSTFSCALSTCADIAALELGKQV 413
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 23/298 (7%)
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
DPD+V N IS G D +L++F+ M R ++ Y +ISG + S+ +
Sbjct: 43 DPDIVTWNKAISSHMRNGHCDSALRVFNSMPR--RSSVSYN--AMISGYLRNAKFSLARD 98
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+ + S++ V+++ Y R + A+ +F+ + D+V+W+A+++GY+Q G
Sbjct: 99 LFDKMPERDLFSWN----VMLTGYVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGF 154
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+A F K+ + + + +LAA + + + + Q +EL + +
Sbjct: 155 VDEAREVFNKMPHR----NSISWNGLLAAYVHNGRLKEARRL--FESQSNWEL--ISWNC 206
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+ Y K LG Q+F+ M R++I++N++I G G QA F + + D
Sbjct: 207 LMGGYVKRNMLGDARQLFDRMPVRDVISWNTMISGYAQVGDLSQAKRLFNESPIR----D 262
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRM--TEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
T++A++ G+V++ R+ F M E A Y+ K++ +AG L EA
Sbjct: 263 VFTWTAMVSGYVQNGMVDEARKYFDEMPVKNEISYNAMLAGYVQYKKMV-IAGELFEA 319
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFN-----------SLFHPDLVTWSALITGYSQQGD 286
+ YV L +RC C N+ Y PD+VTW+ I+ + + G
Sbjct: 2 QFKYVVRHLRMRNSRCLCTNNYYRSKRRSTNSYSPSSVKFKDPDIVTWNKAISSHMRNGH 61
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
AL F + + + +I+ L A S + + F +VM++
Sbjct: 62 CDSALRVFNSMPRRSSVSYNAMISGYLRNAKFSL---ARDLFDKMPERDLFSWNVMLTG- 117
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
Y + LG ++F+ M +++++++N+++ G +GF +A E F + + +
Sbjct: 118 ----YVRNRRLGEAHKLFDLMPKKDVVSWNAMLSGYAQNGFVDEAREVFNKMPHR----N 169
Query: 407 ESTFSALLCACCHGGLVNDGREIF 430
+++ LL A H G + + R +F
Sbjct: 170 SISWNGLLAAYVHNGRLKEARRLF 193
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++H V KA F L+ +Y A +F+ ++ V WN++I
Sbjct: 406 ALELGKQVHGQVVKAGFETGCFVGNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIA 465
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
YA A LF+++ + +KPD T + ACS
Sbjct: 466 GYARHGFGRQALVLFESMKKAGVKPDEITMVGVLSACS 503
>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 745
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/535 (29%), Positives = 270/535 (50%), Gaps = 26/535 (4%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ELH K D F L+ +Y L SAR++FD+ P+R V W +++ Y +
Sbjct: 108 RELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRS 167
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT- 141
F +A L + + +K + D+ R VHG IV +G + +
Sbjct: 168 KAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHG-YIVRNVGDEKMEV 226
Query: 142 --SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
++AL+ Y K + A ++FD +S +V MI+G D+ + F+ ML
Sbjct: 227 SMTTALIDMYCKGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEE 286
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
P+E TL+ LI+ L +G+ H + L++ F + + L+ MY +C + A
Sbjct: 287 KLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYA 346
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+FN + D+ WS LI+ Y+ + F ++ K + V + S+L+ A++
Sbjct: 347 RALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEA 406
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
+ G H Y+ +HG E+ V++ +AL++MY+KCG + + +F +R+I +N+++
Sbjct: 407 GALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMM 466
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +HG +A E F ++ G+ P++ TF ++ AC H GL+
Sbjct: 467 AGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLM---------------- 510
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY +V LLG AG+L+EA++ I ++P + + GALL+ C ++ N L E+ A
Sbjct: 511 ----EHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAAR 566
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW--VSGS 552
++ E DP+ Y V+ SN YA RW+DV +R+ + +G++KE G+SW VSGS
Sbjct: 567 KILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGS 621
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 188/416 (45%), Gaps = 23/416 (5%)
Query: 15 SHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWN 73
SH +L +T +LHA K PF++ A N+L S+ + PQ S +
Sbjct: 18 SHLNLQQTHQLHAHFIKTQFHNPHPFFSQSHFTPEANYNLLISSYT-NNHLPQASFNCY- 75
Query: 74 SIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
L R NDA +L DNF + +AC++ S R +HG A +
Sbjct: 76 -------LHMRSNDAAAL-----------DNFILPSLLKACAQASSGDLGRELHGFAQKN 117
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D +AL+ Y K + A VFD + + D+V +M+ + + ++L+L
Sbjct: 118 GFASDVFVCNALMNMYEKCGCLVSARLVFDQMPERDVVSWTTMLGCYVRSKAFGEALRLV 177
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--SVLVSMYA 251
M +G L+ LI+ + G+ +HG+ +++ D VS + L+ MY
Sbjct: 178 REMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTALIDMYC 237
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+ C+ SA +F+ L +V+W+ +I G + + F ++ + + + + S
Sbjct: 238 KGGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKNFNRMLEEKLFPNEITLLS 297
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
++ + G H Y++++GF +S+ + +AL+DMY KCG +G +F + +++
Sbjct: 298 LITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYARALFNGVKKKD 357
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++ +I Q F F +++ + P+ T +LL C G ++ G+
Sbjct: 358 VKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAGALDLGK 413
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L L +L K HA + + L D T L+ +YA + AR LF++ QR
Sbjct: 399 LLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRD 458
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +WN+++ +++ +A LF + ++P++ T+ I ACS + + H
Sbjct: 459 IRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLME-----HY 513
Query: 129 GAIVSGLGR 137
G +V LGR
Sbjct: 514 GCLVDLLGR 522
>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
Length = 665
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 171/537 (31%), Positives = 253/537 (47%), Gaps = 77/537 (14%)
Query: 88 AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVT 147
+ SL L PD ++C LP R +H A VSGL RD +S+L+
Sbjct: 4 SSSLHHFLRHVSFPPDPHLLPTAFKSCPT---LPLARALHAVAEVSGLARDPFVASSLLH 60
Query: 148 AYSKLSLIDEAIKVFDGVSDPD--LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT-PD 204
AY +L A +FDG+ P +V +++++ A G + + +L + M R G P+
Sbjct: 61 AYLRLGTTGNARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPN 120
Query: 205 EYTLVGLISGL------------------------------------WEPSLLSVGQGIH 228
T GL+SGL + L+SVGQ +H
Sbjct: 121 VITWNGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLH 180
Query: 229 GFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS------ 282
G+ +K+ + V + L+ MY +C VF+ H D+ + +ALI G S
Sbjct: 181 GYAVKAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVC 240
Query: 283 -----------------------------QQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
Q G +A+ +FR++ QG + + V I VL
Sbjct: 241 EALRLFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVL 300
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A A A + G H + ++ GF V VSSALVDMY+KCG + +F+TM RN++
Sbjct: 301 PAFANVAALMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVV 360
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++N++I G ++G A F +++ PD TF+ LL AC GL +GR F M
Sbjct: 361 SWNAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEM 420
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL 493
EYG+ + EHY MV LLG AG L+EAY I +P D + G+LL C ++GN DL
Sbjct: 421 HNEYGVSPRMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDL 480
Query: 494 AEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
AE+ A +LF +P V+LSN YA WD V ++R+ + D GL+KE G SW+
Sbjct: 481 AEVAAEKLFHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIE 537
>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 837
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 157/525 (29%), Positives = 271/525 (51%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H+ K + F + L+ Y+L +++ A +F+ ++ +W +++ Y+
Sbjct: 184 VHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDC 243
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+A +F + + KP+ F + +A + + +HG AI + + A
Sbjct: 244 PENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGA 303
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y+K I +A F+ + D++L + MIS +A +++ +LF ++R P+
Sbjct: 304 LLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPN 363
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
EY+L ++ L G+ IH +K +S +V + L+ YA+CN M+S+ +F+
Sbjct: 364 EYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFS 423
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
SL + V+W+ ++ G+SQ G +AL F ++ V +SVL A A +A++
Sbjct: 424 SLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRH 483
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
IH + + F ++ ++L+D Y+KCGY+ ++VF+ + ER+II++N++I G L
Sbjct: 484 AGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYAL 543
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG A E F + + + ++ TF ALL C GLVN G +F M ++GI+ E
Sbjct: 544 HGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSME 603
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY +V+LLG AG L +A FI +P V ALLS C I+ N L A ++ E
Sbjct: 604 HYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEI 663
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P+ V+LSN YA G D V LR + + G+RK G+SWV
Sbjct: 664 EPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWV 708
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 196/383 (51%), Gaps = 4/383 (1%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F A L+ +Y L SAR LFD+ P+R++ + ++++A+A F A +LF+ L
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLR-FVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ + F + + + D GL VH A G ++ S L+ AYS SL+
Sbjct: 155 WEGHEVNQFVLTTMLKL-AIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLV 213
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI-SG 214
+A VF+G+ D V+ +M+S ++ + + ++F M G P+ + L ++ +
Sbjct: 214 SDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAA 273
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ PS++ +G+GIHG +K+ D+ +V L+ MYA+C + A F + + D++
Sbjct: 274 VCLPSVV-LGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
S +I+ Y+Q +A F +L + ++SVL A + G IH + I+
Sbjct: 333 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G E + V +AL+D Y+KC + +++F ++ + N +++N++++G G +A
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452
Query: 395 FRDIIEKGLNPDESTFSALLCAC 417
F ++ + + T+S++L AC
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRAC 475
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 2/329 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIV-SGLGR-DSITSSALVTAYSKLSLIDEAIK 160
D+F A + C D G R VHG + G+GR D ++ L+ Y KL + A +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
+FD + + ++V +++ A G ++ + LF + G +++ L ++
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ G+H K D +V S L+ Y+ C+ ++ A HVFN + D V W+A+++
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
YS+ A F K+ + G K +P + SVL AA +V G IHG I+ +
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V AL+DMY+KCG + FE + ++I + +I QAFE F ++
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREI 429
+ P+E + S++L AC + ++ G++I
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQI 386
>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g27610-like [Cucumis sativus]
Length = 878
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 163/530 (30%), Positives = 271/530 (51%), Gaps = 8/530 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA++ K F L+ +Y + ++ A +FD R WN +I YA
Sbjct: 226 QVHAMIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIG 285
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ + +F + +K + + CS+ +L + +H G + +G +
Sbjct: 286 FYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRT 345
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDP--DLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
AL+ YSK S +DEA K+F ++D ++V +MI GF K++ LF M R G
Sbjct: 346 ALMVTYSKCSSVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGV 404
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P+ +T +++G +PS S+ +H +K+ ++ V++ L+ Y + + +
Sbjct: 405 RPNHFTYSTVLAG--KPS--SLLSQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESAR 460
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA- 320
VF S+ D+V WSA++TG +Q D KA+ F +L +G K + +SV+ A + SA
Sbjct: 461 VFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAA 520
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
V G IH ++ G ++ VSSAL+ MYSK G + +VF ER+I+++NS+I
Sbjct: 521 TVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEERDIVSWNSMIT 580
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G HG +A E F+ + +GL D+ TF +L AC H GLV +G + F M ++Y I
Sbjct: 581 GYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKYFNIMIKDYHID 640
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
K EHY MV L AG ++A I +P P P + LL+ C ++ N +L ++ A +
Sbjct: 641 KKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHRNLELGKLAAEK 700
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L P V+LSN +A G W++ +R + + ++KEAG SW+
Sbjct: 701 LVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWIE 750
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/409 (24%), Positives = 203/409 (49%), Gaps = 6/409 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H K+ L D T LV +Y R +FD+ ++V W S++ YA
Sbjct: 124 RQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSLLSGYARN 183
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++ L + + P+ FT+A + A ++ S + G VH + +G +
Sbjct: 184 GLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGFEFTTFVC 243
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL+ Y K ++ +A VFD + D V N MI G+A GF+ + Q+F M G
Sbjct: 244 NALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHRMRLAGVK 303
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+ + L+ + +H +K+ ++ + + L+ Y++C+ ++ A+ +
Sbjct: 304 LSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMVTYSKCSSVDEAFKL 363
Query: 263 FN-SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F+ + ++VTW+A+I G+ Q + KA+ F +++ +G + + ++VLA S
Sbjct: 364 FSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHFTYSTVLAGKPSSLL 423
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ +H +I+ +E V++AL+D Y K G + +VF ++ ++I+ +++++ G
Sbjct: 424 ----SQLHAQIIKAYYEKVPSVATALLDAYVKTGNVVESARVFYSIPAKDIVAWSAMLTG 479
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREI 429
L + +A E F ++++G+ P+E TFS+++ AC V G++I
Sbjct: 480 LAQTRDSEKAMEVFIQLVKEGVKPNEYTFSSVINACSSSAATVEHGKQI 528
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 181/366 (49%), Gaps = 5/366 (1%)
Query: 54 LPS----ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYAC 109
LPS A LFD+TP + + +N ++ ++ + +A LFK+L + L D T +C
Sbjct: 50 LPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSC 109
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ C D R VH ++ SG D ++LV Y K ++ +FD + +
Sbjct: 110 ALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKN 169
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+V S++SG+A G D+ + L + M G P+ +T ++ L + S++ G +H
Sbjct: 170 VVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHA 229
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+K+ F+ +V + L+ MY + + A VF+S+ D VTW+ +I GY+ G Y +
Sbjct: 230 MIVKNGFEFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLE 289
Query: 290 ALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
F ++ + G K + + L ++ + +H V+++G+E + + +AL+
Sbjct: 290 GFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYEFAQDIRTALMV 349
Query: 350 MYSKCGYLGLGIQVFETM-SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
YSKC + ++F + N++T+ ++I G + +A + F + +G+ P+
Sbjct: 350 TYSKCSSVDEAFKLFSMADAAHNVVTWTAMIGGFVQNNNNKKAVDLFCQMSREGVRPNHF 409
Query: 409 TFSALL 414
T+S +L
Sbjct: 410 TYSTVL 415
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 130/282 (46%), Gaps = 11/282 (3%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A ++FD D+ N ++ F+ ++L LF + G D TL +
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
VG+ +H LKS F V + LV MY + +F+ + ++V+W++L
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
++GY++ G + ++ ++ M+G + A+VL A A + + G +H ++++GF
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQVHAMIVKNGF 236
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
E + V +AL+ MY K +G VF++M R+ +T+N +I G GF + F+ F
Sbjct: 237 EFTTFVCNALICMYLKSEMVGDAEAVFDSMVVRDSVTWNIMIGGYAAIGFYLEGFQMFHR 296
Query: 398 IIEKGLNPDESTFSALLCACC-----------HGGLVNDGRE 428
+ G+ + F L C H G+V +G E
Sbjct: 297 MRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 82/171 (47%)
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+ +F+ D+ ++ L+ +S+ +AL+ F+ L+ G D + ++ L
Sbjct: 57 AHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGVDGLTLSCALKVCGV 116
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +H ++ GF V V ++LVDMY K G +F+ M +N++++ S+
Sbjct: 117 LFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIFDEMGIKNVVSWTSL 176
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ G +G + + +G+NP+ TF+ +L A ++ G ++
Sbjct: 177 LSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESIIEGGVQV 227
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 166/551 (30%), Positives = 278/551 (50%), Gaps = 6/551 (1%)
Query: 4 NLHFLVLEL--SKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF 61
N+ LVL + +S ++ ++H + ++ L P L+ +YA +N + A LF
Sbjct: 135 NVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYA-DNDMERAEELF 193
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL-RTQLKPDNFTYACITRACSENSDL 120
D+ +R V W+ +I Y A LF + ++ D T + +AC+ D+
Sbjct: 194 DEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVLKACANTGDI 253
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
R VHG I GL D ++++ YSK + A K F+ + + V NS+ISG
Sbjct: 254 SMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGL 313
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
++L LF M + G DE TLV L+ + IH ++ ++ +
Sbjct: 314 VRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNE 373
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
+V + L+ Y++C+ + A+ +F+ L D V+WSA+I G++ G +A+ F+++N
Sbjct: 374 FVINSLIDAYSKCDLIELAWKLFDRLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQA 433
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+K + V I S+L A + SA++ HG I+ G V V +A++DMY+KCG +GL
Sbjct: 434 QEKPNGVTILSLLEAFSVSADLKRSKWAHGIAIRRGLAAEVAVGTAILDMYAKCGEIGLS 493
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+ F+ + E+NI+++ ++I G++G A ++ GL P+ T ++L AC HG
Sbjct: 494 RKAFDQIPEKNIVSWGAMIAACGMNGLARDALALLSEMKLHGLKPNVVTTLSVLSACSHG 553
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-- 478
GLV +G F M +++G++ EHY MV +L AG L A + I +P+ +
Sbjct: 554 GLVEEGLSFFENMVQDHGVEPGLEHYSCMVDMLSRAGKLNSAMNLIEKMPERMRDGAGLW 613
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
GALLS C GNS L A ++ E +P+ A + S+ YA G W D ++R +
Sbjct: 614 GALLSACRSSGNSRLGAGAAFRVLELEPQSSAGYFLASSMYAASGLWADAARMRWLVKAR 673
Query: 539 GLRKEAGVSWV 549
G+R AG S V
Sbjct: 674 GVRVVAGYSLV 684
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 91/285 (31%), Positives = 140/285 (49%), Gaps = 4/285 (1%)
Query: 136 GRDSITSS--ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G DS+TS+ +++ Y K +D A+ VFD + D V N MI G G DK L F
Sbjct: 65 GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWF 124
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
+ P+ TLV I + G +HG+ ++S F V + L+SMYA
Sbjct: 125 RQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD- 183
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASV 312
N M A +F+ + D+++WS +I GY Q G+ AL F ++ + D + + SV
Sbjct: 184 NDMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSV 243
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A A + ++ G +HG VI G + + V ++++DMYSKC + F M RN
Sbjct: 244 LKACANTGDISMGRSVHGVVICRGLDYDLFVGNSIIDMYSKCDDHESAFKAFNEMPCRNT 303
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+++NS+I GL +A F + + G DE T LL +C
Sbjct: 304 VSWNSIISGLVRTEKHSEALSLFYSMGKAGFRADEVTLVNLLQSC 348
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 191/409 (46%), Gaps = 6/409 (1%)
Query: 11 ELSKSHQSLSRTKELHALVAKASLLR--DPFYAT--KLVRLYALNNVLPSARILFDKTPQ 66
++ K+ L+ +H+++ S L D +T ++ Y L SA +FD
Sbjct: 39 QMKKAGAQLTDPTLVHSILKACSSLPGFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRS 98
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R WN +I + + F+ +P+ T AC + +
Sbjct: 99 RDSVSWNIMIHGHLSRGASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKM 158
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG I SG ++L++ Y+ + + A ++FD + + D++ + MI G+ G
Sbjct: 159 HGYIIRSGFLDIPSVQNSLLSMYADNDM-ERAEELFDEMCERDVISWSVMIGGYVQTGEA 217
Query: 187 DKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+LQLF M D T+V ++ +S+G+ +HG + D +V +
Sbjct: 218 KMALQLFLEMTSNASIELDGITMVSVLKACANTGDISMGRSVHGVVICRGLDYDLFVGNS 277
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKAD 305
++ MY++C+ SA+ FN + + V+W+++I+G + + +AL F + G +AD
Sbjct: 278 IIDMYSKCDDHESAFKAFNEMPCRNTVSWNSIISGLVRTEKHSEALSLFYSMGKAGFRAD 337
Query: 306 PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE 365
V + ++L + + + IH VI+ G+EL+ V ++L+D YSKC + L ++F+
Sbjct: 338 EVTLVNLLQSCKYFVDPFQCKFIHSIVIRWGYELNEFVINSLIDAYSKCDLIELAWKLFD 397
Query: 366 TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ ++ ++++++I G G +A F+++ + P+ T +LL
Sbjct: 398 RLKTKDTVSWSAMIAGFNHCGKPDEAIALFQEMNQAQEKPNGVTILSLL 446
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
FDS + ++ Y + ++SA VF+S+ D V+W+ +I G+ +G K L++FR
Sbjct: 66 FDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSRGASDKGLWWFR 125
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + + + + + A + G +HGY+I+ GF V ++L+ MY+
Sbjct: 126 QARVIAFEPNVSTLVLAIHACRSLGAMEEGLKMHGYIIRSGFLDIPSVQNSLLSMYAD-N 184
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSALL 414
+ ++F+ M ER++I+++ +I G G A + F ++ + D T ++L
Sbjct: 185 DMERAEELFDEMCERDVISWSVMIGGYVQTGEAKMALQLFLEMTSNASIELDGITMVSVL 244
Query: 415 CACCHGGLVNDGREI 429
AC + G ++ GR +
Sbjct: 245 KACANTGDISMGRSV 259
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 70/164 (42%), Gaps = 18/164 (10%)
Query: 269 PDLVTWSALITGYSQQG--DYGKALYYFRKLNMQGKK-ADPVLIASVLAAAAKSANVWPG 325
P L W+ I + + D +A + ++ G + DP L+ S+L A +
Sbjct: 10 PKLPNWNLGIKDSTNRKWWDSWEACSRYHQMKKAGAQLTDPTLVHSILKACSSLP----- 64
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
GF+ ++++D Y K G L + VF++M R+ +++N +I G
Sbjct: 65 ----------GFDSLTSTGNSVLDFYMKTGALDSALFVFDSMRSRDSVSWNIMIHGHLSR 114
Query: 386 GFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
G + + +FR P+ ST + AC G + +G ++
Sbjct: 115 GASDKGLWWFRQARVIAFEPNVSTLVLAIHACRSLGAMEEGLKM 158
>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
Length = 1012
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/514 (30%), Positives = 267/514 (51%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
+ F + L+ Y+L +++ A +F+ ++ +W +++ Y+ +A +F +
Sbjct: 196 NAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMR 255
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLID 156
+ KP+ F + +A + + +HG AI + + AL+ Y+K I
Sbjct: 256 VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIK 315
Query: 157 EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
+A F+ + D++L + MIS +A +++ +LF ++R P+EY+L ++
Sbjct: 316 DARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACT 375
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
L G+ IH +K +S +V + L+ YA+CN M+S+ +F+SL + V+W+
Sbjct: 376 NMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNT 435
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
++ G+SQ G +AL F ++ V +SVL A A +A++ IH + +
Sbjct: 436 IVVGFSQSGLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHCSIEKST 495
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
F ++ ++L+D Y+KCGY+ ++VF+ + ER+II++N++I G LHG A E F
Sbjct: 496 FNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAADALELFD 555
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+ + + ++ TF ALL C GLVN G +F M ++GI+ EHY +V+LLG A
Sbjct: 556 RMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIVRLLGRA 615
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G L +A FI +P V ALLS C I+ N L A ++ E +P+ V+LS
Sbjct: 616 GRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILEIEPQDETTYVLLS 675
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
N YA G D V LR + + G+RK G+SWV
Sbjct: 676 NMYAAAGSLDQVALLRKSMRNIGVRKVPGLSWVE 709
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 196/383 (51%), Gaps = 4/383 (1%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F A L+ +Y L SAR LFD+ P+R++ + ++++A+A F A +LF+ L
Sbjct: 95 DLFCANVLLNMYGKLGPLASARRLFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLR 154
Query: 97 RTQLKPDNFTYACITRACSENSDLPGLR-FVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ + F + + + D GL VH A G ++ S L+ AYS SL+
Sbjct: 155 WEGHEVNQFVLTTMLK-LAIAMDAAGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLV 213
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI-SG 214
+A VF+G+ D V+ +M+S ++ + + ++F M G P+ + L ++ +
Sbjct: 214 SDAEHVFNGIVRKDAVVWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAA 273
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ PS++ +G+GIHG +K+ D+ +V L+ MYA+C + A F + + D++
Sbjct: 274 VCLPSVV-LGKGIHGCAIKTLNDTEPHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILL 332
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
S +I+ Y+Q +A F +L + ++SVL A + G IH + I+
Sbjct: 333 SFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIK 392
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
G E + V +AL+D Y+KC + +++F ++ + N +++N++++G G +A
Sbjct: 393 IGHESDLFVGNALMDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSV 452
Query: 395 FRDIIEKGLNPDESTFSALLCAC 417
F ++ + + T+S++L AC
Sbjct: 453 FCEMQAAQMPCTQVTYSSVLRAC 475
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 158/329 (48%), Gaps = 2/329 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSG-LGR-DSITSSALVTAYSKLSLIDEAIK 160
D+F A + C D G R VHG + G +GR D ++ L+ Y KL + A +
Sbjct: 58 DSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLASARR 117
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
+FD + + ++V +++ A G ++ + LF + G +++ L ++
Sbjct: 118 LFDRMPERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDA 177
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ G+H K D +V S L+ Y+ C+ ++ A HVFN + D V W+A+++
Sbjct: 178 AGLAGGVHSCAWKLGHDHNAFVGSGLIDAYSLCSLVSDAEHVFNGIVRKDAVVWTAMVSC 237
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
YS+ A F K+ + G K +P + SVL AA +V G IHG I+ +
Sbjct: 238 YSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKTLNDTE 297
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V AL+DMY+KCG + FE + ++I + +I QAFE F ++
Sbjct: 298 PHVGGALLDMYAKCGDIKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMR 357
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREI 429
+ P+E + S++L AC + ++ G++I
Sbjct: 358 SSVLPNEYSLSSVLQACTNMVQLDFGKQI 386
>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
Length = 685
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/518 (29%), Positives = 271/518 (52%), Gaps = 22/518 (4%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD ++ YA N + A+ +FD+ P ++ WN ++ AY R DA+ LF++
Sbjct: 59 RDVVSWNAMLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFES- 117
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL-GRDSITSSALVTAYSKLSL 154
K D + I+ C + R V I + RD ++ + +++ Y++
Sbjct: 118 -----KAD---WELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGE 169
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV--GLI 212
+ EA ++F+ D+ +M+SG+ G D++ ++FD M P++ ++ +I
Sbjct: 170 LLEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGM------PEKNSVSWNAII 223
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
+G + + + + + S++ +++ YA+ + A + F+ + D +
Sbjct: 224 AGYVQCKRMDQARELFEAMPCQNVSSWN----TMITGYAQNGDIAQARNFFDRMPQRDSI 279
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
+W+A+I GY+Q G +AL+ F ++ G++ + S L+ A+ A + G +HG V
Sbjct: 280 SWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRV 339
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
++ G E V +AL+ MY KCG + VFE + E+ ++++N++I G HGF +A
Sbjct: 340 VKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEAL 399
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
F + + G+ PD+ T +L AC H GLV+ G E F MT++YGI A ++HY M+ L
Sbjct: 400 MLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDL 459
Query: 453 LGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYK 512
LG AG L++A + + ++P D A GALL I+GN++L E A +FE +P
Sbjct: 460 LGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMY 519
Query: 513 VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+LSN YA GRW DV ++R + D G++K G SWV
Sbjct: 520 VLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVE 557
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 152/361 (42%), Gaps = 72/361 (19%)
Query: 31 KASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKS 90
+ S +RD F T +V Y N +L AR +FD P+++ WN+II Y R + A+
Sbjct: 178 EESPVRDVFTWTAMVSGYVQNGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMDQARE 237
Query: 91 LF---------------------------KNLLRTQLKPDNFTYACI------------- 110
LF +N + D+ ++A I
Sbjct: 238 LFEAMPCQNVSSWNTMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEA 297
Query: 111 -------------------TRACSENSDLPGLRF---VHGGAIVSGLGRDSITSSALVTA 148
T S +++ L VHG + +GL +AL+
Sbjct: 298 LHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVM 357
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y K ID+A VF+G+ + ++V N+MI+G+A GF ++L LF+ M + G PD+ T+
Sbjct: 358 YCKCGNIDDAYIVFEGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTM 417
Query: 209 VGLISGLWEPSLLSVG-QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL- 266
VG++S L+ G + + + + ++ + R ++ A ++ ++
Sbjct: 418 VGVLSACSHTGLVDKGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMP 477
Query: 267 FHPDLVTWSAL-----ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F PD TW AL I G ++ G+ + + + + G VL++++ AA+ + +
Sbjct: 478 FEPDAATWGALLGASRIHGNTELGEKAAKMIFEMEPDNSGMY---VLLSNLYAASGRWGD 534
Query: 322 V 322
V
Sbjct: 535 V 535
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 14/209 (6%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++H V KA L + L+ +Y + A I+F+ ++ V WN++I
Sbjct: 328 ALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTMIA 387
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
YA +A LF+++ +T + PD+ T + ACS + G + + G+
Sbjct: 388 GYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYGIT 447
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPD-----LVLCNSMISGFAHCGFWDKSL 190
+S + ++ + +D+A + + +PD +L S I G G +K+
Sbjct: 448 ANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELG--EKAA 505
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
++ M PD + L+S L+ S
Sbjct: 506 KMIFEM-----EPDNSGMYVLLSNLYAAS 529
>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 822
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 153/525 (29%), Positives = 264/525 (50%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH+ + K + F L+ Y++ + SAR +F+ + + +W I+ Y
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGC 227
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
F D+ L + P+N+T+ +A + VHG + + D
Sbjct: 228 FEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVG 287
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y++L + +A KVF+ + D+V + MI+ F GF +K++ +F M P+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPN 347
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
E+TL +++G +G+ +HG +K FD YVS+ L+ +YA+C M++A +F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L ++V+W+ +I GY G+ GKAL FR+ V +S L A A A++
Sbjct: 408 ELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMEL 467
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +HG I+ V VS++L+DMY+KCG + + VF M ++ ++N++I G
Sbjct: 468 GVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYST 527
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG QA F + P+ TF +L C + GL++ G++ F M ++GI+ E
Sbjct: 528 HGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHGIEPCLE 587
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV+L G +G L++A + I +P + A+LS N + A A ++ +
Sbjct: 588 HYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKI 647
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P+ A V+LSN YA +W +V +R + + G++KE G+SW+
Sbjct: 648 NPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWI 692
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 189/398 (47%), Gaps = 8/398 (2%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K +H + K D F L+ Y A LFD+ P+R+ + ++ + YA
Sbjct: 68 AKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNNVSYVTLTQGYAC 127
Query: 82 AHRFNDAKSLFKNLLRT--QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
D L+ L R +L P FT + +++ ++H + G ++
Sbjct: 128 ----QDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI--CWWLHSPIVKLGYDSNA 181
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+AL+ AYS +D A VF+G+ D+V+ ++S + G ++ SLQL M
Sbjct: 182 FVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYVENGCFEDSLQLLSRMGMD 241
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P+ YT + + +HG LK+ ++ V L+ +Y + M+ A
Sbjct: 242 GFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPRVGVGLLQLYTQLGDMSDA 301
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+ VFN + D+V WS +I + Q G KA+ F ++ + ++S+L A
Sbjct: 302 FKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIG 361
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
G +HG V++ GF+L V VS+AL+D+Y+KC + +++F +S +N++++N+VI
Sbjct: 362 KCSGLGEQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVI 421
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+G G +A FR+ + ++ E TFS+ L AC
Sbjct: 422 VGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGAC 459
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 145/327 (44%), Gaps = 4/327 (1%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D+ Y + R C +D + +H + G D ++ L+ AY K +A+ +F
Sbjct: 48 DSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + + + V ++ G+A + L+ + R G + + +
Sbjct: 108 DEMPERNNVSYVTLTQGYA----CQDPVGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ +H +K +DS +V + L++ Y+ C ++SA VF + D+V W+ +++ Y
Sbjct: 164 ICWWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARSVFEGILCKDIVVWAGIVSCYV 223
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ G + +L ++ M G + + L A+ +HG +++ +EL
Sbjct: 224 ENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELDPR 283
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V L+ +Y++ G + +VF M + +++ ++ +I +GF +A + F + E
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNKAVDIFIRMREGF 343
Query: 403 LNPDESTFSALLCACCHGGLVNDGREI 429
+ P+E T S++L C G G ++
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQL 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 149/311 (47%), Gaps = 18/311 (5%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LH LV K D + + L+ +YA + +A LF + ++V WN++I Y
Sbjct: 368 EQLHGLVVKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENL 427
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A ++F+ LR Q+ T++ AC+ + + VHG AI + + S
Sbjct: 428 GEGGKALNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKRVAVS 487
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+K I A VF+ + D+ N++ISG++ G ++L++FD M
Sbjct: 488 NSLIDMYAKCGDIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCK 547
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGI-------HGFCLKSSFDSYDYVSSVLVSMYARCNC 255
P+ T +G++SG L+ GQ HG ++ + Y + +V ++ R
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQDCFESMICDHG--IEPCLEHY----TCMVRLFGRSGQ 601
Query: 256 MNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYG---KALYYFRKLNMQGKKADPVLIAS 311
++ A ++ + + P ++ W A+++ Q + ++ K+N + +A VL+++
Sbjct: 602 LDKAMNLIEGIPYEPSVMIWRAMLSASMNQYNEEFARRSAEEILKINPK-DEATYVLLSN 660
Query: 312 VLAAAAKSANV 322
+ A A + ANV
Sbjct: 661 MYAGAKQWANV 671
>gi|225216882|gb|ACN85180.1| EMB2261 putative [Oryza nivara]
gi|225216899|gb|ACN85196.1| EMB2261 putative [Oryza rufipogon]
Length = 615
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 265/533 (49%), Gaps = 7/533 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LH A+A LL D + A L+ Y L LP A FD P+R V +SI+ A+ A
Sbjct: 60 LHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 119
Query: 84 RFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A + +++L + P+ + +AC+ D +HG +V G G D +
Sbjct: 120 MPRRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRGFGDDGV 179
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
S+LV Y ++ +A KVF+ + PD + S+IS F +++++++ F ML +
Sbjct: 180 VLSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMN 239
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD T +++ L S G+ H + V S + MYA+C M A
Sbjct: 240 GVRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEA 299
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+ VF+ + + V+ AL+ GY Q G+Y K + FR+ M + D + +VL A A
Sbjct: 300 HKVFDRMQVRNEVSRCALLGGYCQNGEYEKVIALFRE--MDKEDGDWYSLGTVLRACAGL 357
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++V PG IH ++ V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 358 SSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMI 417
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A F ++ +G PD +F +L AC H G+V GR F M ++YGI
Sbjct: 418 GGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGI 477
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV L LEEA I P D ++ +L + N D+AE V+
Sbjct: 478 APGIEHYNCMVDLFSRVELLEEAEDLINKSPFRNDSSLWADILGASATHSNPDVAERVSK 537
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
++ E +P+ ++L N Y GRW+D +++R + ++KE G+SWV +
Sbjct: 538 KMMELEPQYHLSYILLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWVDAN 590
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 117/261 (44%), Gaps = 4/261 (1%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S+ ++ HA V L + + + +YA ++ A +FD+ R+ +++ Y
Sbjct: 262 SQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEAHKVFDRMQVRNEVSRCALLGGY 321
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +LF+ + + D ++ + RAC+ S + + +H + RD
Sbjct: 322 CQNGEYEKVIALFREMDKED--GDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMAGWRDV 379
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ SALV Y+K +D A VF+ + + + N+MI GFA G ++++ LF+ M+R
Sbjct: 380 VVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNGHGERAINLFNRMVRE 439
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD + +G++ ++ G+ + C + +V +++R +
Sbjct: 440 GPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGIAPGIEHYNCMVDLFSRVELLEE 499
Query: 259 AYHVFN-SLFHPDLVTWSALI 278
A + N S F D W+ ++
Sbjct: 500 AEDLINKSPFRNDSSLWADIL 520
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + + RD + LV LYA + A +F+ + R+
Sbjct: 350 VLRACAGLSSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRN 409
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVH 127
WN++I +A A +LF ++R +PD ++ + ACS + G + +
Sbjct: 410 TITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFN 469
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
G+ + +V +S++ L++EA
Sbjct: 470 SMCKDYGIAPGIEHYNCMVDLFSRVELLEEA 500
>gi|242059659|ref|XP_002458975.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
gi|241930950|gb|EES04095.1| hypothetical protein SORBIDRAFT_03g043630 [Sorghum bicolor]
Length = 590
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 175/546 (32%), Positives = 284/546 (52%), Gaps = 23/546 (4%)
Query: 14 KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNV---LPSARILFDKTPQ---R 67
++ +S S + HAL+ + L + L A+ +V P A +F + P+ R
Sbjct: 18 RACRSASHAIQCHALLLTSGHLAASPLRLSNLLLLAIASVPGAAPLADAVFARLPEPAAR 77
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR--- 124
F WN+ IR +A R A F + ++PD +T+ + +AC PG R
Sbjct: 78 DPFPWNTAIRLHAPG-RPRAALLYFARMRSCGVRPDAYTFPAVLKACGCA---PGCRAGL 133
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD---GVSDPDLVLCNSMISGFA 181
VH A+ GLG D T +AL++ Y ++ KVFD GVS DLV NSM++G+
Sbjct: 134 LVHAEAVRRGLGADLFTVNALISFYCRILDCISGRKVFDEAGGVSR-DLVSWNSMVAGYV 192
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
CG + +LFD M D ++ LI G + V + F + D +
Sbjct: 193 GCGEMGLAQELFDEM----PQRDAFSWGALIDGYGKQGGAGVDRARELFDQMTERDLVCW 248
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
S ++ YAR M+ A +F + ++++WS +I G+ + G+ +AL +F+ + G
Sbjct: 249 NS--MIDGYARHGRMDEARSLFEEMPERNVISWSIVIDGHVRCGEAKEALEHFQSMLRCG 306
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D V ++A A+ + G +H Y+ + V+V +AL+DMY KCG + L +
Sbjct: 307 IRPDRVAAVGAVSACAQLGALEQGRWLHSYLEKKKVLSDVVVQTALIDMYMKCGRMDLAM 366
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+FE+M ER+++T+N +I+GLG HG+ A F + + + D+ + A+L AC H G
Sbjct: 367 LIFESMPERSVVTWNVMIVGLGTHGYGLDAVMLFHRMEAERVAVDDLSLLAMLTACTHAG 426
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
LV++G EIF RM +++GI K EHY +V LLG AG L++A I ++P P + G+L
Sbjct: 427 LVSEGLEIFHRMKKDFGIDPKVEHYGALVDLLGRAGRLDQARHAIETMPMEPTPELWGSL 486
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L+ C + +LAE+ +L V+LSN YA++G W DV+++R + D G+R
Sbjct: 487 LAACRSHSCVELAELSVERLANLGADDSGVYVLLSNIYADEGMWGDVLRIRKLMSDEGMR 546
Query: 542 KEAGVS 547
K+ G S
Sbjct: 547 KDIGRS 552
>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
gi|194688780|gb|ACF78474.1| unknown [Zea mays]
gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
Length = 695
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/551 (30%), Positives = 259/551 (47%), Gaps = 12/551 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S SL +LH + K D L+ +Y L A +F R+
Sbjct: 10 LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRDRN 69
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNL--LRT--QLKPDNFTYACITRACSENSDLPGLR 124
V W +++ + R DA + L +RT + P+ +T + +AC D
Sbjct: 70 VVSWTALMVGFL---RHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGV 126
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFAHC 183
+HG + +G + +S+LV YSK I +A +VFDG + N+M+SG+AH
Sbjct: 127 GIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186
Query: 184 GFWDKSLQLFDWMLRL--GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD--SY 239
G +L +F M R PDE+T L+ G +H S F S
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
++ LV MY +C + A VF L +++ W+A++ G++Q+G +AL FR+
Sbjct: 247 AILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWR 306
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G + D +++SV+ A A V G +H Y I+ V +++VDMY KCG
Sbjct: 307 SGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCGLPDE 366
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
++F M N++++ +++ GLG HG +A F ++ G+ PDE T+ ALL AC H
Sbjct: 367 AERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLSACSH 426
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV++ R F+ + + ++ K EHY MV LLG AG L EA I ++P V
Sbjct: 427 AGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQ 486
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
LLS C ++ + + L D V LSN AE G W + K+RD + G
Sbjct: 487 TLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKVRDAMRRRG 546
Query: 540 LRKEAGVSWVS 550
L+K+ G SWV
Sbjct: 547 LKKQGGCSWVE 557
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 169/342 (49%), Gaps = 11/342 (3%)
Query: 108 ACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD 167
A + RA + +S L G +HG G G D++ + L+ Y K +D A +VF G+ D
Sbjct: 8 AGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGMRD 67
Query: 168 PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQG 226
++V +++ GF G L+L M + P+EYTL + + G G
Sbjct: 68 RNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVG 127
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQG 285
IHG C+++ + +D V+S LV +Y++ + A VF+ + TW+A+++GY+ G
Sbjct: 128 IHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGYAHAG 187
Query: 286 DYGKALYYFRKLNM-QGK-KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS--V 341
AL FR++ +G+ + D AS+L A + GA +H + GF +
Sbjct: 188 HGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASNA 247
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+++ ALVDMY KC L + +QVFE + +N+I + +V++G G +A E FR
Sbjct: 248 ILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRS 307
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
G PD S+++ LV GR++ YGI+ T
Sbjct: 308 GARPDSHVLSSVVGVLADFALVEQGRQVHC-----YGIKDPT 344
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 4/234 (1%)
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+ + GL+ S L G +HG K F S + + L+ MY +C ++ A VF
Sbjct: 4 QKMIAGLLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFG 63
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA-DPVLIASVLAAAAKSANVW 323
+ ++V+W+AL+ G+ + GD L ++ + A + +++ L A +
Sbjct: 64 GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGL 382
G IHG ++ G++ +V+S+LV +YSK G +G +VF+ I T+N+++ G
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSKGGRIGDARRVFDGAGLGSGIATWNAMVSGY 183
Query: 383 GLHGFTYQAFEFFRDII--EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
G A FR++ E PDE TF++LL AC G +G ++ MT
Sbjct: 184 AHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMT 237
>gi|334185093|ref|NP_187175.2| mitochondrial editing factor 19 [Arabidopsis thaliana]
gi|218546759|sp|Q9MA95.2|PP214_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g05240
gi|332640689|gb|AEE74210.1| mitochondrial editing factor 19 [Arabidopsis thaliana]
Length = 565
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 169/557 (30%), Positives = 278/557 (49%), Gaps = 18/557 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS------ARILFD 62
+L ++ +SL +LH L+ K+S++R+ L RL P AR +F+
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRN---VIPLSRLIDFCTTCPETMNLSYARSVFE 65
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
SV++WNS+IR Y+ + + A ++ +LR PD FT+ + +ACS D+
Sbjct: 66 SIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQF 125
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
VHG + +G + S+ L+ Y ++ ++VF+ + ++V S+ISGF +
Sbjct: 126 GSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVN 185
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY--- 239
+ +++ F M G +E +V L+ + G+ HGF FD Y
Sbjct: 186 NNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQS 245
Query: 240 -----DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
+++ L+ MYA+C + +A ++F+ + LV+W+++ITGYSQ GD +AL F
Sbjct: 246 KVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMF 305
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
+ G D V SV+ A+ G IH YV + GF + ALV+MY+K
Sbjct: 306 LDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKT 365
Query: 355 GYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTFSAL 413
G + FE + +++ I + VI+GL HG +A F+ + EKG PD T+ +
Sbjct: 366 GDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGV 425
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV 473
L AC H GLV +G+ F M + +G++ EHY MV +L AG EEA + ++P
Sbjct: 426 LYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 485
Query: 474 DPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
+ + GALL+ C I+ N +L + + + E + V+LSN YA+ GRW DV +R+
Sbjct: 486 NVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRE 545
Query: 534 DIVDNGLRKEAGVSWVS 550
+ + K G S V
Sbjct: 546 SMKSKRVDKVLGHSSVE 562
>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 701
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/496 (30%), Positives = 260/496 (52%), Gaps = 19/496 (3%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
W+SII+ Y + + S F ++ + P+ + + +A + +H +
Sbjct: 78 WSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTV 137
Query: 132 VSGLGRDSITSSALVTAYSKL---------------SLIDEAIKVFDGVSDPDLVLCNSM 176
GL D ++AL+ Y+K S ID KVFD + D+V N++
Sbjct: 138 RLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNTV 197
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
I+GFA G + ++L + M + GK PD +TL ++ E ++ G+ IHG+ +++
Sbjct: 198 IAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNG 257
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
FD ++ S L+ MYA+CN + + F L D ++W+++I G Q G++ + L +FR
Sbjct: 258 FDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGLGFFR 317
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ + K V +SV+ A A + G +HG +++ GF+ + ++S+LVDMY+KCG
Sbjct: 318 RMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCG 377
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ + VF+ + +R+++ + ++I+G +HG A F +++E G+ P F A+L
Sbjct: 378 NIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVAFMAVLT 437
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H GLV++G F M ++GI EHY + LLG AG LEEAY FI ++ + V P
Sbjct: 438 ACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNM-RGVQP 496
Query: 476 --AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
+V LL+ C + + +LAE V +L D V++SN Y+ RW D +LR
Sbjct: 497 TGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAARLRI 556
Query: 534 DIVDNGLRKEAGVSWV 549
+ GL+K SW+
Sbjct: 557 HMRKKGLKKTPACSWI 572
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 97/216 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L + H +++ KE+H + D F + L+ +YA N L + F P++
Sbjct: 233 ILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKD 292
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
WNSII F+ F+ +L+ +KP +++ + AC+ + L R +HG
Sbjct: 293 AISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHG 352
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+ G + +S+LV Y+K I A VFD + D+V ++I G A G
Sbjct: 353 CIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALD 412
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
++ LF+ ML G P + +++ L+ G
Sbjct: 413 AVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEG 448
>gi|297823227|ref|XP_002879496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297325335|gb|EFH55755.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 617
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 167/537 (31%), Positives = 266/537 (49%), Gaps = 13/537 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+++ +E+ A + S+ + F K V L N A L T + + + +N +IR
Sbjct: 46 SVNQLREIQAQMLLHSVEKPNFLIPKAVELGDFN----YASFLLSVTEEPNHYSFNYMIR 101
Query: 78 AYALAHRFND---AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
L + +ND A SL++ + + LKPDNFTY + AC + ++ R VH G
Sbjct: 102 G--LTNIWNDHEGALSLYRRMKYSGLKPDNFTYNFVFIACGKREEIGVGRSVHSSLFKVG 159
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L RD S +L+ Y+K L+ A KVFD ++D V NSMISG++ G ++ LF
Sbjct: 160 LERDDHISHSLIMMYAKCGLVGYARKVFDEITDRVTVSWNSMISGYSEAGRAKDAMDLFR 219
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PDE TLV ++ L+ G+ + + ++ S L++MY +C
Sbjct: 220 KMEEEGFEPDERTLVSMLGACAHLGDLTTGRLLEKMAITKKIGLSTFLGSKLITMYGKCG 279
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++SA VFN + D V W+A+IT YSQ G +A F ++ G D +++VL+
Sbjct: 280 DLDSARRVFNQMIKKDRVAWNAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 339
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + G I + + + ++ V++ LVDMY KCG++ ++VFE M +N T
Sbjct: 340 ACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAMPVKNEAT 399
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N++I G +A F + + P + TF +L AC H GLV+ G F M+
Sbjct: 400 WNAMITAYAHQGHAKEALLLFDQM---PVPPSDVTFIGVLSACVHAGLVDQGCRYFHEMS 456
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+G+ K EHY ++ LL AG L+EA+ F+ P D + A+L CH + +
Sbjct: 457 SLFGLVPKIEHYTNIIDLLSRAGLLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIR 516
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGR-WDDVMKLRDDIVDNGLRKEAGVSWVS 550
E L E K A ++S+ D + WD+ K+R + D G+ K G SW+
Sbjct: 517 EKAMRMLMEMKEAKNAGNYVISSKVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 573
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L K + ++ SL + + AT LV +Y + A +F+ P ++
Sbjct: 337 VLSACGSVGALELGKRIETHASEISLQHNIYVATGLVDMYGKCGHIEEALRVFEAMPVKN 396
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
WN++I AYA +A LF + + P + T+ + AC + G R+ H
Sbjct: 397 EATWNAMITAYAHQGHAKEALLLFDQM---PVPPSDVTFIGVLSACVHAGLVDQGCRYFH 453
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA---IKVFDGVSDPDLVLCNSMI 177
+ + GL + ++ S+ L+DEA ++ F G PD ++ +++
Sbjct: 454 EMSSLFGLVPKIEHYTNIIDLLSRAGLLDEAWEFMERFPG--KPDEIMLAAIL 504
>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
Length = 631
Score = 262 bits (670), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 254/508 (50%), Gaps = 1/508 (0%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y+ ++ A++L TP R V W ++I F+ A F + R +KP++FT
Sbjct: 1 MYSKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFT 60
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
+ C +A + + +H A+ G D + YSK L EA ++FD +
Sbjct: 61 FPCAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMP 120
Query: 167 DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG 226
++ + N+ IS G K++ F R+G PD T ++ + L +G+
Sbjct: 121 PRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+HG ++S F+ V++ ++ +Y +C + A VFN + + V+W ++ Q +
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
KA F +G + +++SV++A A + + G +H ++ E + V SA
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
LVDMY KCG + QVF M ERN++++N++I G G A F ++ + + +
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-AN 359
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
T +L AC GG V G EIF M + Y I+ EHY + +LG AG +E AY F+
Sbjct: 360 YVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFV 419
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
+P +V GALL+ C +YG +L +I A LF+ DP+ V+LSN +A GRWD
Sbjct: 420 QKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWD 479
Query: 527 DVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
+ +R ++ D G++K AG SWV+ +
Sbjct: 480 EATLVRKEMKDVGIKKGAGCSWVTAKNK 507
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 175/400 (43%), Gaps = 44/400 (11%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA+ K + D F +Y+ + A+ LFD+ P R+V +WN+ I L
Sbjct: 78 KQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEMPPRNVAVWNAYISNAVLD 137
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
R A F R +PD T+ AC++ L R +HG I SG D +
Sbjct: 138 GRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQLHGLVIRSGFEGDVSVA 197
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ ++ Y K ++ A VF+G+ + V +M++ +K+ +F + G
Sbjct: 198 NGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDEKEKACVVFLMGRKEGIE 257
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
+Y + +IS S L G+ +H +K+ + +V S LV MY +C + V
Sbjct: 258 LTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSALVDMYGKCGSIEDCEQV 317
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + +LV+W+A+I+GY+ QGD A+ F ++ + A+ V + VL+A
Sbjct: 318 FHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEA-VANYVTLICVLSAC------ 370
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT-----YNS 377
S+ G + LG ++FE+M +R I Y
Sbjct: 371 -----------------------------SRGGAVKLGNEIFESMRDRYRIEPGAEHYAC 401
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ LG G +A+EF + + + P S + ALL AC
Sbjct: 402 IADMLGRAGMVERAYEFVQKM---PIRPTISVWGALLNAC 438
>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
Length = 633
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 143/452 (31%), Positives = 244/452 (53%), Gaps = 1/452 (0%)
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
+L P Y I AC++ +L G R +H S L D+ ++L+ Y K + +A
Sbjct: 55 ELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDA 114
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
VFD + D+V +I+G+A +++ L MLR P+ +T L+
Sbjct: 115 RHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGAC 174
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
S+G+ +H +K ++D YV S L+ MYARC M+ A VF+ L + V+W+ALI
Sbjct: 175 GGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALI 234
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
G++++ D L F ++ G A +S+ +A A+ + G +H ++I+ G +
Sbjct: 235 AGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQK 294
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
L+ V + ++ MY+K G + +VF+ M +R+++T+N+++ L +G +A F +I
Sbjct: 295 LTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEI 354
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ G+ ++ TF ++L AC HGGLV +G+ F M ++Y +Q + +HY+ V LLG AG
Sbjct: 355 RKCGIQLNQITFLSVLTACSHGGLVKEGKHYFD-MMKDYNVQPEIDHYVSFVDLLGRAGL 413
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
L+EA F++ +P AV GALL C ++ N+ + + A +FE DP V+L N
Sbjct: 414 LKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPDDTGPPVLLYNI 473
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
YA G+W+D ++R + G++KE SWV
Sbjct: 474 YASTGKWNDAARVRKMMKATGVKKEPACSWVQ 505
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 178/399 (44%), Gaps = 3/399 (0%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L+ + +HA ++++ L D F L+ +Y + AR +FDK P R V W +I
Sbjct: 74 KNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCKCGAVSDARHVFDKMPSRDVVSWTYLI 133
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
YA + +A L ++LR + +P+ FT+ + +A +H A+
Sbjct: 134 AGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWD 193
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
D SAL+ Y++ +D AI VFD + + V N++I+GFA + +L F M
Sbjct: 194 EDVYVGSALLDMYARCEQMDMAIMVFDRLVSKNEVSWNALIAGFARKADGETTLMKFAEM 253
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R G +T + S L G+ +H +KS +V + ++ MYA+ M
Sbjct: 254 QRNGFGATHFTYSSMFSAFARIGALEQGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSM 313
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+ + DLVTW+ ++T +Q G +A+ +F ++ G + + + SVL A
Sbjct: 314 VDARKVFDRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTAC 373
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG-IQVFETMSERNIITY 375
+ V G + + + + + VD+ + G L I VF+ E +
Sbjct: 374 SHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVW 433
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+++ +H + E L+PD++ LL
Sbjct: 434 GALLGACRMHKNAKMGQYAADHVFE--LDPDDTGPPVLL 470
>gi|296084064|emb|CBI24452.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 144/434 (33%), Positives = 240/434 (55%), Gaps = 7/434 (1%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKL--SLIDEAIKVFDGVSDPDLVLCNSMISGF 180
++ +H I+ G + + LV Y++ S I++A KVFD + D D+ + N++I G+
Sbjct: 23 IKSIHAQIIIGGFEENPFLGAKLVGKYAQCYESNIEDARKVFDCLPDRDVFVWNTIIQGY 82
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
A+ G + ++L ++++M G + YT ++ GQ IHG +K D
Sbjct: 83 ANLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMKDGKKGQAIHGHVVKHGLDLDL 142
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNM 299
+V + LV+ YA+CN + ++ VF+ + D+VTW+++I+GY+ G AL F L +
Sbjct: 143 FVGNALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMISGYAINGCADDALVLFHNMLQV 202
Query: 300 QGKKA---DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
QG D + ++L A A++A + G IH YVI+ G EL + S L+ MY+ CG
Sbjct: 203 QGDTVYAPDSATLVAILPACAQAAAIQEGLWIHSYVIKSGIELDAALGSGLIAMYANCGL 262
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
L VF+ + ++NI+ +N++I G+HG +A + F +I+ GL+PD F LL A
Sbjct: 263 LNSARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHPDGVIFLCLLSA 322
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
H G+V +G E+F +M +YG++ +EHY +V +LG AG L EA F+ ++P
Sbjct: 323 FSHAGMVAEGMELFEKMG-DYGVEKSSEHYASVVDILGRAGFLHEAVEFVKNMPVQPGKD 381
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
V GALL C I+ N +LAE +A +LF DP ++L Y + G+W++ +LR +
Sbjct: 382 VYGALLGACRIHNNIELAEEIAEKLFVLDPDNAGRYIILVKMYEDAGKWENAARLRKALK 441
Query: 537 DNGLRKEAGVSWVS 550
+ +RK G S +
Sbjct: 442 EKNIRKPLGCSAIE 455
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 234/503 (46%), Gaps = 62/503 (12%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYA--LNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
K +HA + +PF KLV YA + + AR +FD P R VF+WN+II+ YA
Sbjct: 24 KSIHAQIIIGGFEENPFLGAKLVGKYAQCYESNIEDARKVFDCLPDRDVFVWNTIIQGYA 83
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
F +A ++++ + + + + +T+ + +AC D + +HG + GL D
Sbjct: 84 NLGPFMEALNIYEYMRCSGVAANRYTFPFVLKACGAMKDGKKGQAIHGHVVKHGLDLDLF 143
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
+ALV Y+K + I + +VFD +S+ D+V NSMISG+A G D +L LF ML++
Sbjct: 144 VGNALVAFYAKCNEIGASRRVFDMISEKDIVTWNSMISGYAINGCADDALVLFHNMLQVQ 203
Query: 200 GKT---PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
G T PD TLV ++ + + + G IH + +KS + + S L++MYA C +
Sbjct: 204 GDTVYAPDSATLVAILPACAQAAAIQEGLWIHSYVIKSGIELDAALGSGLIAMYANCGLL 263
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
NSA VF+ + ++V W+A+I Y G +AL F L G D V+ +L+A
Sbjct: 264 NSARDVFDRIDDKNIVVWNAIIRCYGMHGHADEALKMFSGLIDSGLHPDGVIFLCLLSA- 322
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS----ERNI 372
+S G + G+++FE M E++
Sbjct: 323 ----------------------------------FSHAGMVAEGMELFEKMGDYGVEKSS 348
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
Y SV+ LG GF ++A EF +++ + P + + ALL AC +++ E+
Sbjct: 349 EHYASVVDILGRAGFLHEAVEFVKNM---PVQPGKDVYGALLGAC----RIHNNIELAEE 401
Query: 433 MTEEYGI--QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP-----KPVDPAVSGALLSCC 485
+ E+ + YI +VK+ AG E A +L KP+ S L C
Sbjct: 402 IAEKLFVLDPDNAGRYIILVKMYEDAGKWENAARLRKALKEKNIRKPL--GCSAIELGCV 459
Query: 486 -HIYGNSDLAEIVAHQLFENDPR 507
H +G D + Q+F+ R
Sbjct: 460 LHTFGVEDKSHPFKDQIFDTLER 482
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 4/221 (1%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ + + + + +H V K L D F LV YA N + ++R +FD ++
Sbjct: 112 FVLKACGAMKDGKKGQAIHGHVVKHGLDLDLFVGNALVAFYAKCNEIGASRRVFDMISEK 171
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ----LKPDNFTYACITRACSENSDLPGL 123
+ WNS+I YA+ +DA LF N+L+ Q PD+ T I AC++ + +
Sbjct: 172 DIVTWNSMISGYAINGCADDALVLFHNMLQVQGDTVYAPDSATLVAILPACAQAAAIQEG 231
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
++H I SG+ D+ S L+ Y+ L++ A VFD + D ++V+ N++I +
Sbjct: 232 LWIHSYVIKSGIELDAALGSGLIAMYANCGLLNSARDVFDRIDDKNIVVWNAIIRCYGMH 291
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
G D++L++F ++ G PD + L+S +++ G
Sbjct: 292 GHADEALKMFSGLIDSGLHPDGVIFLCLLSAFSHAGMVAEG 332
>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 820
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 270/540 (50%), Gaps = 11/540 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL K +HA + F +T L+ +YA + + +F+ + + WN++I
Sbjct: 236 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 295
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+A LF + P+ +T +++A + D+ + V A G+
Sbjct: 296 GCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG 355
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFD------GVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+ + +AL+ YSK + +A VFD GV+ P N+MISG++ G ++L+
Sbjct: 356 NVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTP----WNAMISGYSQSGCSQEALE 411
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDYVSSVLVSMY 250
L+ M + G T D YT + + + L G+ +HG LK D V++ + Y
Sbjct: 412 LYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAY 471
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
++C + VF+ + D+V+W+ L+T YSQ +AL F + +G + +
Sbjct: 472 SKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFS 531
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SVL + A + G +HG + + G + + SAL+DMY+KCG + +VF+ +S
Sbjct: 532 SVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP 591
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+I+++ ++I G HG A + FR + G+ + T +L AC HGG+V +G F
Sbjct: 592 DIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYF 651
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
+M + YG+ + EHY ++ LLG G L++A FI +P + V LL C ++GN
Sbjct: 652 QQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGN 711
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L EI A ++ P A V+LSNTY E G ++D + LR+ + D G++KE G SW+S
Sbjct: 712 VELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWIS 771
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 214/426 (50%), Gaps = 5/426 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYA--TKLVRLYALNNVLPSARILFDKTPQ 66
VL S+ K +H LV K++ +Y+ + +A +FD+ PQ
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 183
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R+VF W +I F D F +L + + PD F Y+ I ++C L + V
Sbjct: 184 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 243
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H ++ G S++L+ Y+KL I+++ VF+ +++ + V N+MISG G
Sbjct: 244 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 303
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ LF M TP+ YTLV + + + +++G+ + + + V + L
Sbjct: 304 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 363
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVT--WSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
+ MY++C ++ A VF++ F V W+A+I+GYSQ G +AL + ++ G +
Sbjct: 364 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 423
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQV 363
D SV A A S ++ G V+HG V++ G +L V+ V++A+ D YSKCG+L +V
Sbjct: 424 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 483
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ M ER+I+++ +++ +A F + E+G P++ TFS++L +C +
Sbjct: 484 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 543
Query: 424 NDGREI 429
GR++
Sbjct: 544 EYGRQV 549
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 127/261 (48%), Gaps = 7/261 (2%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS----MYARCNCMNSAYHVF 263
L+ ++ E + + +HG LKS+F+ D + VL + +Y++C+ +A VF
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLM--VLFNHAAHVYSKCSEFRAACGVF 178
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + ++ +W+ +I G ++ G + +F ++ G D ++++ + ++
Sbjct: 179 DEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLE 238
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H ++ GF + VS++L++MY+K G + VF M+E N +++N++I G
Sbjct: 239 LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCT 298
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+G +AF+ F + P+ T ++ A VN G+E+ E GI+
Sbjct: 299 SNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV-QNCASELGIEGNV 357
Query: 444 EHYIYMVKLLGLAGNLEEAYS 464
++ + G+L +A S
Sbjct: 358 LVGTALIDMYSKCGSLHDARS 378
>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
Length = 846
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/540 (29%), Positives = 270/540 (50%), Gaps = 11/540 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL K +HA + F +T L+ +YA + + +F+ + + WN++I
Sbjct: 182 SLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMIS 241
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
+A LF + P+ +T +++A + D+ + V A G+
Sbjct: 242 GCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEG 301
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFD------GVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
+ + +AL+ YSK + +A VFD GV+ P N+MISG++ G ++L+
Sbjct: 302 NVLVGTALIDMYSKCGSLHDARSVFDTNFINCGVNTP----WNAMISGYSQSGCSQEALE 357
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDYVSSVLVSMY 250
L+ M + G T D YT + + + L G+ +HG LK D V++ + Y
Sbjct: 358 LYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAY 417
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
++C + VF+ + D+V+W+ L+T YSQ +AL F + +G + +
Sbjct: 418 SKCGFLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFS 477
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SVL + A + G +HG + + G + + SAL+DMY+KCG + +VF+ +S
Sbjct: 478 SVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNP 537
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
+I+++ ++I G HG A + FR + G+ + T +L AC HGG+V +G F
Sbjct: 538 DIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYF 597
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGN 490
+M + YG+ + EHY ++ LLG G L++A FI +P + V LL C ++GN
Sbjct: 598 QQMEDGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGN 657
Query: 491 SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+L EI A ++ P A V+LSNTY E G ++D + LR+ + D G++KE G SW+S
Sbjct: 658 VELGEIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWIS 717
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 214/426 (50%), Gaps = 5/426 (1%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYA--TKLVRLYALNNVLPSARILFDKTPQ 66
VL S+ K +H LV K++ +Y+ + +A +FD+ PQ
Sbjct: 70 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEMPQ 129
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
R+VF W +I F D F +L + + PD F Y+ I ++C L + V
Sbjct: 130 RNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKMV 189
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H ++ G S++L+ Y+KL I+++ VF+ +++ + V N+MISG G
Sbjct: 190 HAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTSNGLH 249
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++ LF M TP+ YTLV + + + +++G+ + + + V + L
Sbjct: 250 LEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLVGTAL 309
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVT--WSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
+ MY++C ++ A VF++ F V W+A+I+GYSQ G +AL + ++ G +
Sbjct: 310 IDMYSKCGSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITS 369
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQV 363
D SV A A S ++ G V+HG V++ G +L V+ V++A+ D YSKCG+L +V
Sbjct: 370 DLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCGFLEDVRKV 429
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F+ M ER+I+++ +++ +A F + E+G P++ TFS++L +C +
Sbjct: 430 FDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFL 489
Query: 424 NDGREI 429
GR++
Sbjct: 490 EYGRQV 495
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 127/261 (48%), Gaps = 7/261 (2%)
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS----MYARCNCMNSAYHVF 263
L+ ++ E + + +HG LKS+F+ D + VL + +Y++C+ +A VF
Sbjct: 67 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLM--VLFNHAAHVYSKCSEFRAACGVF 124
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ + ++ +W+ +I G ++ G + +F ++ G D ++++ + ++
Sbjct: 125 DEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLE 184
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
G ++H ++ GF + VS++L++MY+K G + VF M+E N +++N++I G
Sbjct: 185 LGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCT 244
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
+G +AF+ F + P+ T ++ A VN G+E+ E GI+
Sbjct: 245 SNGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEV-QNCASELGIEGNV 303
Query: 444 EHYIYMVKLLGLAGNLEEAYS 464
++ + G+L +A S
Sbjct: 304 LVGTALIDMYSKCGSLHDARS 324
>gi|449519412|ref|XP_004166729.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
mitochondrial-like [Cucumis sativus]
Length = 781
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 164/540 (30%), Positives = 283/540 (52%), Gaps = 17/540 (3%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH L K D F LV +Y+ L AR +FD+ P R W+++I YA
Sbjct: 192 QLHTLALKCGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEG 251
Query: 84 RFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A +F ++R +K DN C +L + +H A+ +G +
Sbjct: 252 DNGLQAILVFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVG 311
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L++ YSK +I++A VF+ ++D +++ +MIS + + ++ LF+ M G
Sbjct: 312 NVLISTYSKCEIIEDAKAVFELINDRNVISWTTMISLYE-----EGAVSLFNKMRLDGVY 366
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P++ T +GL+ + +++ G +HG C+K+ F S V + L++MYA+ M A V
Sbjct: 367 PNDVTFIGLLHAITIRNMVEQGLMVHGLCIKADFVSELTVGNSLITMYAKFEFMQDASRV 426
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA--AAKSA 320
F L + ++++W+ALI+GY+Q +AL F M+ K + SVL A A +
Sbjct: 427 FIELPYREIISWNALISGYAQNALCQEALEAFLYAIME-YKPNEYTFGSVLNAISAGEDI 485
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G H ++I+ G + ++S AL+DMY+K G + +VF S+++ + ++I
Sbjct: 486 SLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALIS 545
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G HG + F ++ ++ + PD F ++L AC +V+ GR+ F M +++ I+
Sbjct: 546 GYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRNRMVDMGRQFFNMMIKDHMIE 605
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG--ALLSCCHIYGNSDLAEIVA 498
+ EHY MV +LG AG LEEA + +P P VS +LL C +GN ++AE +A
Sbjct: 606 PEGEHYSCMVDMLGRAGRLEEAEEILARIPG--GPGVSALQSLLGACRTHGNVEMAERIA 663
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS----GSSN 554
+ L + +P + V++SN YA+ G W+ V K+R ++ + G+ KE G SWV G+SN
Sbjct: 664 NDLMKKEPLESGPYVLMSNLYAQKGDWEKVAKVRKEMRERGVMKEIGFSWVDVGNFGASN 723
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/374 (29%), Positives = 174/374 (46%), Gaps = 21/374 (5%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL--KPDNFTYACITRACSEN 117
LFD++P + +N ++ Y + FKN R L D FT +AC
Sbjct: 29 LFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACC-- 86
Query: 118 SDLPGL-RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
P L R +HG I SG S++L+ Y K ++ A VF + DPD+V N++
Sbjct: 87 -GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTI 145
Query: 177 ISGFAHCGFWDKSLQLFDWMLRL---GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
+SGF +KS + LR+ G D T +S + G +H LK
Sbjct: 146 LSGF------EKSENALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALK 199
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALY 292
F +V + LV+MY+R + A VF+ + D V+WSA+ITGY+Q+GD G +A+
Sbjct: 200 CGFKGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAIL 259
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
F ++ +G K D V I L+ N+ G IH ++ G E V + L+ YS
Sbjct: 260 VFVQMVREGVKFDNVPITGALSVCGHERNLELGKQIHCLAVKTGHETHTSVGNVLISTYS 319
Query: 353 KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSA 412
KC + VFE +++RN+I++ ++I + A F + G+ P++ TF
Sbjct: 320 KCEIIEDAKAVFELINDRNVISWTTMI-----SLYEEGAVSLFNKMRLDGVYPNDVTFIG 374
Query: 413 LLCACCHGGLVNDG 426
LL A +V G
Sbjct: 375 LLHAITIRNMVEQG 388
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 10/273 (3%)
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG--KTPDEYTLV-GLISGLWE 217
+FD P+ N ++ + +SL+ F R G DE+TLV L +
Sbjct: 29 LFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACCGF 88
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
P L G+ IHGF + S F S+ VS+ L++MY + + A+ VF +L PD+V+W+ +
Sbjct: 89 PKL---GRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTI 145
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
++G+ + + AL + ++N+ G K D V + L+ G +H ++ GF
Sbjct: 146 LSGFEKSEN---ALSFALRMNLNGVKFDSVTYTTALSFCLDGEEFLFGWQLHTLALKCGF 202
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT-YQAFEFFR 396
+ V V +ALV MYS+ +L +VF+ M R+ ++++++I G G QA F
Sbjct: 203 KGDVFVGNALVTMYSRWEHLVDARKVFDEMPSRDRVSWSAMITGYAQEGDNGLQAILVFV 262
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ +G+ D + L C H + G++I
Sbjct: 263 QMVREGVKFDNVPITGALSVCGHERNLELGKQI 295
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 51/100 (51%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL + H+ + K L DP + L+ +YA + ++ +F++T ++S F W ++I
Sbjct: 486 SLKHGQRCHSHLIKVGLNVDPIISGALLDMYAKRGSIQESQRVFNETSKQSQFAWTALIS 545
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
YA + LF+ + + ++KPD + + ACS N
Sbjct: 546 GYAQHGDYESVIKLFEEMEKERIKPDAVIFLSVLTACSRN 585
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 3/161 (1%)
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+++F+ P+ +++ ++ Y + ++L +F+ G + VLA A
Sbjct: 27 HNLFDQSPPPNAASFNRVLLNYLPRDGAFQSLRFFKNNFRWGLDGNADEFTLVLALKACC 86
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
G IHG+VI GF + VS++L++MY K G L VF+ + + +I+++N+++
Sbjct: 87 GFPKLGRQIHGFVISSGFVSHITVSNSLMNMYCKSGQLERAFSVFQNLHDPDIVSWNTIL 146
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
G + A F + G+ D T++ L C G
Sbjct: 147 SGFEK---SENALSFALRMNLNGVKFDSVTYTTALSFCLDG 184
>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
Length = 849
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 160/532 (30%), Positives = 275/532 (51%), Gaps = 3/532 (0%)
Query: 21 RTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
+++HA A L D T L+ +YA + A ++FD+ + + N++I AY
Sbjct: 200 EARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVFDQARNKDLACCNAMISAY 259
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
DA S F + + L+P+ TYA + RAC+ N R H I+S L D
Sbjct: 260 IQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYSDARVAHMCFILSKLRPDV 319
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ ++ALV+ YS+ +++A +VFD + ++V N MI+G+A G+ D++LQL+ M
Sbjct: 320 VVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYAQEGYTDEALQLYVSMEAA 379
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PDE T V ++ L+ G+ IH + + +DS V S L++MY+ C + A
Sbjct: 380 GVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLTVLSALITMYSACGSLGDA 439
Query: 260 YHVFNS--LFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
VF+ H +++W+A++T ++ G+ AL FRK++++G +A+ V S + A +
Sbjct: 440 VDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDLEGVRANVVTFVSTIDACS 499
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ G I VI G + V++ ++L+++Y KCG L ++VF +S +NI+T+N+
Sbjct: 500 SIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLDYALEVFHYLSFKNIVTWNT 559
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
++ +G + E +++ G P+E T +L C H GLV F M +
Sbjct: 560 ILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNMLFGCSHNGLVAKAVSYFRSMVYGH 619
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
+ +EHY +V LLG +G LEE +FI S P +D + +LL C I+ + +
Sbjct: 620 CLVPTSEHYGCLVDLLGRSGQLEEVEAFISSKPFSLDSVLWMSLLGSCVIHSDVERGLRA 679
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++ DP+ + V+LSN +A G D V L + ++KE S++
Sbjct: 680 ARRVLGLDPKNASPYVLLSNMFAAIGMLDAVKSLAKLAGERAMKKEQSRSYI 731
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 187/393 (47%), Gaps = 3/393 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
+V Y + AR++F +V+ W ++ AYA L + + + P+
Sbjct: 122 VVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMDLLGVWPN 181
Query: 104 NFTYACITRACSENSDLPGLRFVHG-GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
T A + A SE + R +H A L D + +AL+ Y+K I A VF
Sbjct: 182 AVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDIFHAEVVF 241
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + DL CN+MIS + G+ ++ F+ + G P++ T L + S
Sbjct: 242 DQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRACATNGVYS 301
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ H + S V++ LVSMY+RC + A VF+ + ++VTW+ +I GY+
Sbjct: 302 DARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGYA 361
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q+G +AL + + G + D + +VL + + + ++ G IH +V+ G++ S+
Sbjct: 362 QEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSLT 421
Query: 343 VSSALVDMYSKCGYLGLGIQVFE--TMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V SAL+ MYS CG LG + VF + ++I++ +++ L +G A FR +
Sbjct: 422 VLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMDL 481
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
+G+ + TF + + AC G + +G IF R+
Sbjct: 482 EGVRANVVTFVSTIDACSSIGALVEGHAIFERV 514
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 142/299 (47%), Gaps = 1/299 (0%)
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D + + +V AY K + +A VF + P++ +++ +A G L+L M
Sbjct: 115 DRLLLNCVVEAYGKCGCVKDARLVFSSIRHPNVYSWTILLAAYAQNGHHKTVLELLRQMD 174
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV-SSVLVSMYARCNCM 256
LG P+ TL +I + E + IH + +YD V + L+ MYA+C +
Sbjct: 175 LLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCGDI 234
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A VF+ + DL +A+I+ Y Q G A+ F ++ G + + V A + A
Sbjct: 235 FHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRAC 294
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A + V H I V+V++ALV MYS+CG L +VF+ M +N++T+N
Sbjct: 295 ATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWN 354
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+I G G+T +A + + + G+ PDE TF +L +C + GR+I + +
Sbjct: 355 VMIAGYAQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVD 413
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 133/296 (44%), Gaps = 2/296 (0%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S + H + L D T LV +Y+ L AR +FD+ P ++V WN +I Y
Sbjct: 301 SDARVAHMCFILSKLRPDVVVNTALVSMYSRCGSLEDARRVFDRMPGKNVVTWNVMIAGY 360
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
A ++A L+ ++ ++PD T+ + +CS L R +H + +G
Sbjct: 361 AQEGYTDEALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHKHVVDAGYDSSL 420
Query: 140 ITSSALVTAYSKLSLIDEAIKVF-DGVSDPDLVLC-NSMISGFAHCGFWDKSLQLFDWML 197
SAL+T YS + +A+ VF GV+ V+ +M++ G +L LF M
Sbjct: 421 TVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEGRSALALFRKMD 480
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G + T V I L G I + + + + L+++Y +C ++
Sbjct: 481 LEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSLINLYGKCGRLD 540
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
A VF+ L ++VTW+ ++ SQ G+ + +++++ G + + + + ++L
Sbjct: 541 YALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNEMTLLNML 596
>gi|357461615|ref|XP_003601089.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355490137|gb|AES71340.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 745
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 169/509 (33%), Positives = 259/509 (50%), Gaps = 11/509 (2%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKP 102
L+ YA ++ A LFDK P+ + WNSII L + F +++ + LK
Sbjct: 177 LILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAG--LVDNASSRALRFVSMMHGKGLKM 234
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D FT+ + +AC + +L R +H I SG SAL+ YS L+ EA K+F
Sbjct: 235 DEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIF 294
Query: 163 D------GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLW 216
D VS+ L L NSM+SG G + ++L + M R G D YT ++
Sbjct: 295 DQYFRNSSVSE-SLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICM 353
Query: 217 EPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSA 276
LS+ +HGF + S ++ V S+L+ +YA+ +N+A +F L D+V WS+
Sbjct: 354 NFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSS 413
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
LITG ++ G A F + G + D +I+ VL A + A+ G +H ++ G
Sbjct: 414 LITGCARFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKG 473
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
+E +V++AL+DMY+KCG + + +F +SE + +++ S+I+G +G +A
Sbjct: 474 YESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNGRAEEAISLLH 533
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
+IE G P++ T +L AC H GLV + ++F + +G+ EHY MV +LG A
Sbjct: 534 KMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHYNCMVDILGQA 593
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G EEA I +P D + +LL C Y N DLA IVA L P + +MLS
Sbjct: 594 GRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSPEDVSVYIMLS 653
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
N YA G WD V K+R+ + G +K AG
Sbjct: 654 NVYAALGMWDSVSKVRETVKKIG-KKRAG 681
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/535 (23%), Positives = 254/535 (47%), Gaps = 40/535 (7%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+S+ K LH+ + K+ F ++ +Y+ + + AR +FD+ P R++ W +++
Sbjct: 17 RSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIVSWTTMV 76
Query: 77 RAYALAHRFNDAKSLFKNLLRTQL-KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
+ ++A SL+ ++ +++ +P+ F Y+ + +AC ++ + VH + L
Sbjct: 77 SVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKL 136
Query: 136 GRDSITSSA-------------------------------LVTAYSKLSLIDEAIKVFDG 164
D + +A L+ Y+K LID+A+K+FD
Sbjct: 137 DVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDK 196
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ +PD+V NS+I+G ++L+ M G DE+T ++ L +G
Sbjct: 197 MPEPDIVSWNSIIAGLVD-NASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLG 255
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH-----PDLVTWSALIT 279
+ IH + +KS F+S Y S L+ MY+ C ++ A +F+ F L W+++++
Sbjct: 256 REIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSESLALWNSMLS 315
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G+ GDY +AL ++ G + D + VL N+ + +HG+VI G+EL
Sbjct: 316 GHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVITSGYEL 375
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+V S L+D+Y+K G + +++FE + +++++ ++S+I G G AF F D+I
Sbjct: 376 DCVVGSILIDIYAKQGSINNALRLFERLPDKDVVAWSSLITGCARFGSDKLAFSLFMDMI 435
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
GL D S +L AC G+++ + + + G +++ ++ + G++
Sbjct: 436 HLGLQIDHFVISIVLKACSSLASHQHGKQVHS-LCLKKGYESEGVVTTALIDMYAKCGDI 494
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
E+A S L + +D +++ C G ++ A + H++ E+ + ++
Sbjct: 495 EDALSLFGCLSE-IDTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITIL 548
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 177/431 (41%), Gaps = 62/431 (14%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
R C + + +H I SG + +++ YSK S I +A +FD + ++V
Sbjct: 11 RYCIRFRSIKNAKSLHSHIIKSGFCNHIFILNNMISVYSKCSSIIDARNMFDEMPHRNIV 70
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLG-KTPDEYTLVGLISGLWEPSLLSVGQGIHGF 230
+M+S + ++L L++ M+ + P+++ ++ + +G+ +H
Sbjct: 71 SWTTMVSVLTNSSMPHEALSLYNEMIESKIEQPNQFLYSAVLKACGLVRNVELGKMVHYH 130
Query: 231 CLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA 290
++ D + + L+ MY +C + A VF + + +W+ LI GY++QG A
Sbjct: 131 IFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVFCEIPCKNATSWNTLILGYAKQGLIDDA 190
Query: 291 LYYFRKLN----------------------------MQGK--KADPVLIASVLAAAAKSA 320
+ F K+ M GK K D SVL A S
Sbjct: 191 MKLFDKMPEPDIVSWNSIIAGLVDNASSRALRFVSMMHGKGLKMDEFTFPSVLKACGCSD 250
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFE------TMSERNIIT 374
+ G IH Y+I+ GFE S SAL+DMYS C L ++F+ ++SE ++
Sbjct: 251 ELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEATKIFDQYFRNSSVSE-SLAL 309
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-----------CHGGLV 423
+NS++ G ++G +A + G+ D TFS +L C HG ++
Sbjct: 310 WNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLKICMNFDNLSLASQVHGFVI 369
Query: 424 NDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLS 483
G E+ + ++ + G++ A LP D +L++
Sbjct: 370 TSGYELDCVVGS------------ILIDIYAKQGSINNALRLFERLPDK-DVVAWSSLIT 416
Query: 484 CCHIYGNSDLA 494
C +G+ LA
Sbjct: 417 GCARFGSDKLA 427
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 136/287 (47%), Gaps = 30/287 (10%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL++ + +LS ++H V + D + L+ +YA + +A LF++ P +
Sbjct: 347 IVLKICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERLPDK 406
Query: 68 SVFLWNSIIRAYALAHRFNDAK---SLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
V W+S+I A RF K SLF +++ L+ D+F + + +ACS + +
Sbjct: 407 DVVAWSSLITGCA---RFGSDKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGK 463
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
VH + G + + ++AL+ Y+K I++A+ +F +S+ D + S+I G A G
Sbjct: 464 QVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEIDTMSWTSIIVGCAQNG 523
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++++ L M+ G P++ T++G+++ L ++ ++D ++ + +
Sbjct: 524 RAEEAISLLHKMIESGTKPNKITILGVLTACRHSGL-----------VEEAWDVFNSIET 572
Query: 245 V--LVSMYARCNCM----------NSAYHVFNSL-FHPDLVTWSALI 278
L+ NCM A + + + F PD WS+L+
Sbjct: 573 NHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLL 619
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 60/293 (20%), Positives = 115/293 (39%), Gaps = 19/293 (6%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+VL+ S S K++H+L K + T L+ +YA + A LF +
Sbjct: 448 IVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLFGCLSEI 507
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
W SII A R +A SL ++ + KP+ T + AC + + V
Sbjct: 508 DTMSWTSIIVGCAQNGRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVF 567
Query: 128 GGAIVS-GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPDLVLCNSMISGFAHCGF 185
+ GL + +V + +EA+K+ + PD + +S++ CG
Sbjct: 568 NSIETNHGLIPCPEHYNCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGA---CGT 624
Query: 186 W-DKSLQLFDWMLRLGKTPDEYTLVGLIS------GLWEPSLLSVGQGIHGFCLKSSFDS 238
+ ++ L L +P++ ++ ++S G+W+ S+ V + + K +
Sbjct: 625 YKNRDLANIVAEHLLATSPEDVSVYIMLSNVYAALGMWD-SVSKVRETVKKIGKKRAGKI 683
Query: 239 YDYVSSVLVSM------YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
+ + M +A+ V + PDLV+W+ +I G +
Sbjct: 684 FYEIPFKFYFMEHLHLGHAKQGLNGGVVKVIYPILEPDLVSWNNVIAGLADNA 736
>gi|242035229|ref|XP_002465009.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
gi|241918863|gb|EER92007.1| hypothetical protein SORBIDRAFT_01g030410 [Sorghum bicolor]
Length = 684
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/509 (31%), Positives = 267/509 (52%), Gaps = 6/509 (1%)
Query: 44 LVRLYALNNVLPSARILFDKTP--QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
L YA L +A +P + + WN+++ A + A A +F+ L + +
Sbjct: 50 LAAAYARVGALDAAESTLAASPSSRSCIPAWNALLAARSRAGSPGAALRVFRAL-PSSAR 108
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD+ T+ AC+ DL V A +G GRD SAL+ YS+ + +AI+V
Sbjct: 109 PDSTTFTLALTACARLGDLDAAEAVRVRAFAAGYGRDVFVCSALLHVYSRCGAMGDAIRV 168
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLL 221
FDG+ D V ++M++GF G ++L ++ M G DE +VG+I
Sbjct: 169 FDGMPRKDHVAWSTMVAGFVSAGRPVEALGMYSRMREHGVAEDEVVMVGVIQACTLTGNT 228
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
+G +HG L+ +++ LV MYA+ + A VF + + + V+W+ALI+G+
Sbjct: 229 RMGASVHGRFLRHGMRMDVVIATSLVDMYAKNGHFDVARQVFRMMPYRNAVSWNALISGF 288
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
+Q G +AL FR+++ G + D + S L A A + G IHG++++ E
Sbjct: 289 AQNGHADEALDLFREMSTSGLQPDSGALVSALLACADVGFLKLGKSIHGFILRR-LEFQC 347
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
++ +A++DMYSKCG L ++F +S R+++ +N++I G HG + A F+++ E
Sbjct: 348 ILGTAVLDMYSKCGSLESARKLFNKLSSRDLVLWNAMIACCGTHGCGHDALALFQELNET 407
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
G+ PD +TF++LL A H GLV +G+ F RM E+GI+ +H + +V LL +G +EE
Sbjct: 408 GIKPDHATFASLLSALSHSGLVEEGKFWFDRMITEFGIEPTEKHCVCVVDLLARSGLVEE 467
Query: 462 AYSFIWSL-PKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYA 520
A + S+ +P P + ALLS C +L E +A ++ E+ P ++SN YA
Sbjct: 468 ANEMLASMHTEPTIP-IWVALLSGCLNNKKLELGETIAKKILESQPEDIGVLALVSNLYA 526
Query: 521 EDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+WD V ++R + D+G +K G S +
Sbjct: 527 AAKKWDKVREIRKLMKDSGSKKVPGYSLI 555
>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Cucumis sativus]
Length = 855
Score = 262 bits (669), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 280/600 (46%), Gaps = 53/600 (8%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ SL +HA+V L + F +V +Y L A +FD+ +R
Sbjct: 132 FVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLER 191
Query: 68 SV---FLWNSIIRAYALAHRFNDAKSL---FKNLLRTQLKPDNFTYACITRACSENSDLP 121
+ WNSI+ AY + A + N +L+PD T I AC+ L
Sbjct: 192 KIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPACASVFALQ 251
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+ VHG ++ +GL D +ALV+ Y+K S ++EA KVF+G+ D+V N+M++G++
Sbjct: 252 HGKQVHGFSVRNGLVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYS 311
Query: 182 HCGFWDKSLQLFDWM----LRL-------------------------------GKTPDEY 206
G +D +L LF M ++L G P+
Sbjct: 312 QIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVV 371
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSF-----DSYD--YVSSVLVSMYARCNCMNSA 259
TL L+SG L G+ H + +K+ D D V + L+ MYA+C A
Sbjct: 372 TLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVA 431
Query: 260 YHVFNSLFHPD--LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAA 315
+F+S+ D +VTW+ +I GY+Q G+ AL F ++ Q P ++ L A
Sbjct: 432 RSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMA 491
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVM-VSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A+ + G +H Y +++ E V+ V + L+DMYSK G + VF+ M RN+++
Sbjct: 492 CARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAVFDNMKLRNVVS 551
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ S++ G G+HG +A F + + G D TF +L AC H G+V+ G F M
Sbjct: 552 WTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMVDQGMIYFHDMV 611
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+ +GI EHY MV LLG AG L EA I ++ V ALLS I+ N +L
Sbjct: 612 KGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLSASRIHANIELG 671
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
E A +L E +LSN YA RW DV ++R + G+RK G SW+ G +
Sbjct: 672 EYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKRPGCSWIQGKKS 731
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 199/420 (47%), Gaps = 64/420 (15%)
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-- 125
+VF WN++IR +D + + R PD++T+ + +AC E +P LR
Sbjct: 91 TVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLPDHYTFPFVLKACGE---IPSLRHGA 147
Query: 126 -VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSD---PDLVLCNSMISGFA 181
VH +GLG + +++V Y + +D+A ++FD V + D+V NS+++ +
Sbjct: 148 SVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAHQMFDEVLERKIEDIVSWNSILAAYV 207
Query: 182 HCGFWDKSLQLFDWMLRLGK------TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
G +L++ R+G PD TLV ++ L G+ +HGF +++
Sbjct: 208 QGGQSRTALRI---AFRMGNHYSLKLRPDAITLVNILPACASVFALQHGKQVHGFSVRNG 264
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG------- 288
+V + LVSMYA+C+ MN A VF + D+V+W+A++TGYSQ G +
Sbjct: 265 LVDDVFVGNALVSMYAKCSKMNEANKVFEGIKKKDVVSWNAMVTGYSQIGSFDSALSLFK 324
Query: 289 ----------------------------KALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+AL FR++ + G + + V +AS+L+ A
Sbjct: 325 MMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQMQLYGLEPNVVTLASLLSGCASVG 384
Query: 321 NVWPGAVIHGYVIQHGFELS-------VMVSSALVDMYSKCGYLGLGIQVFETMS--ERN 371
+ G H YVI++ L+ ++V + L+DMY+KC + +F+++ ++N
Sbjct: 385 ALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLIDMYAKCKSYRVARSIFDSIEGKDKN 444
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEK--GLNPDESTFSALLCACCHGGLVNDGREI 429
++T+ +I G HG A + F I ++ L P+ T S L AC G + GR++
Sbjct: 445 VVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKPNAFTLSCALMACARLGELRLGRQL 504
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 8/194 (4%)
Query: 244 SVLVSMYARCNCMNSAYHVFNSLF--HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
S V Y C A + L H + W+ALI + G L ++ ++ G
Sbjct: 63 SYAVGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLG 122
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
D VL A + ++ GA +H V +G +V + +++V MY +CG L
Sbjct: 123 WLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGALDDAH 182
Query: 362 QVFETMSER---NIITYNSVILGLGLHGFTYQAFEF-FR--DIIEKGLNPDESTFSALLC 415
Q+F+ + ER +I+++NS++ G + A FR + L PD T +L
Sbjct: 183 QMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILP 242
Query: 416 ACCHGGLVNDGREI 429
AC + G+++
Sbjct: 243 ACASVFALQHGKQV 256
>gi|224091939|ref|XP_002309408.1| predicted protein [Populus trichocarpa]
gi|222855384|gb|EEE92931.1| predicted protein [Populus trichocarpa]
Length = 547
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 162/542 (29%), Positives = 283/542 (52%), Gaps = 17/542 (3%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L KS +++ + HA + L +D F + + +++ + + +F++ S FL
Sbjct: 15 LIKSCKTIPHLHQFHAHIIHKGLEQDHFIISHFL---SISTSVSYSTSIFNRLLNPSTFL 71
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLK-PDNFTYACITRACSENSDLPGLRFVHGGA 130
+N +++ ++ +F D SLF + +++ D +TY + + CS L VHG A
Sbjct: 72 YNILLKIFSKNSQFIDTFSLFYRMKQSEYALSDKYTYPLLIKVCSNELRLKEGEIVHGSA 131
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
I G+ D S+L++ Y K I A KVFD + + ++V +M++G+A G + +
Sbjct: 132 IRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPERNVVSWTAMVAGYASVGDLENAK 191
Query: 191 QLFDWMLRLGKTPDEY--TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++F+ M P+ + +ISGL + LS + + ++ + S+ +V++
Sbjct: 192 RVFERM------PERNLPSWNAMISGLGKAGDLSGARKVFDEMVERNVVSF----TVMID 241
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
YA+ M SA +F+ D+V WSALI+GYS+ +A+ F ++ K D +
Sbjct: 242 GYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQPNEAVKIFFEMVSMNVKPDEFI 301
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFEL-SVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ S+++A ++ N + Y+ Q + V +AL+DM++KCG + +++F+ M
Sbjct: 302 MVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAALIDMHAKCGNMEKAVKLFQDM 361
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
R++I S+I GL +HG +A E F ++++GL PD F+ +L AC GGL+ DG
Sbjct: 362 PSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDTVAFTVILTACSRGGLIEDGW 421
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
F M +Y + HY MV LL AG L AY + S+P GALL C +
Sbjct: 422 HFFDTMKNKYSVVPSPNHYACMVDLLSRAGQLRAAYDLLKSMPLKPHACAWGALLGACKL 481
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+G+ +L E VA++L E +P K V+LSN YA +W DV +RD++ + G+RK G S
Sbjct: 482 HGDVELREEVANRLLELEPEKAGSYVLLSNIYASANQWLDVSIVRDEMKERGIRKIPGCS 541
Query: 548 WV 549
++
Sbjct: 542 YI 543
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/418 (22%), Positives = 196/418 (46%), Gaps = 29/418 (6%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L++++ + L + +H + + D + + L+ Y + SAR +FD+ P+R
Sbjct: 110 LLIKVCSNELRLKEGEIVHGSAIRCGVSDDVYVGSSLISFYGKCKEILSARKVFDEIPER 169
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W +++ YA +AK +F+ + L N + + +A DL G R V
Sbjct: 170 NVVSWTAMVAGYASVGDLENAKRVFERMPERNLPSWNAMISGLGKA----GDLSGARKVF 225
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ R+ ++ + ++ Y+K+ + A +FD + D+V +++ISG++ +
Sbjct: 226 DEMV----ERNVVSFTVMIDGYAKVGDMASARALFDEAPEKDVVAWSALISGYSRNEQPN 281
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVL 246
+++++F M+ + PDE+ +V L+S + + + + + ++S D+ +V + L
Sbjct: 282 EAVKIFFEMVSMNVKPDEFIMVSLMSACSQLGNSDLAKWVDSYLSQTSIDTRQAHVLAAL 341
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ M+A+C M A +F + DL+ +LI G S G +A+ F ++ +G D
Sbjct: 342 IDMHAKCGNMEKAVKLFQDMPSRDLIPCCSLIQGLSIHGRGVEAVELFNRMLDEGLIPDT 401
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-----SVMVS----SALVDMYSKCGYL 357
V +L A ++ G + G+ H F+ SV+ S + +VD+ S+ G L
Sbjct: 402 VAFTVILTACSRG-----GLIEDGW---HFFDTMKNKYSVVPSPNHYACMVDLLSRAGQL 453
Query: 358 GLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALL 414
+ ++M + + + +++ LHG E ++E L P+++ LL
Sbjct: 454 RAAYDLLKSMPLKPHACAWGALLGACKLHGDVELREEVANRLLE--LEPEKAGSYVLL 509
>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
[Solanum demissum]
Length = 819
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 166/533 (31%), Positives = 266/533 (49%), Gaps = 1/533 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L ++H+ + + LV Y L A LF + P + +N +I
Sbjct: 158 TLKEVLQIHSHIIRFGFSASLIVFNSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMIT 217
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y +A LF + +P FT+A + + D+ + +HG AI +
Sbjct: 218 GYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVW 277
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D ++AL+ YSK ID A +FD + + D V N +I+G+A G ++KS LF +
Sbjct: 278 DIFVANALLDFYSKHDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQ 337
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ ++S LS+G+ H + ++ S V + LV MYA+C
Sbjct: 338 GTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFE 397
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A +F +L + + V W+A+I+ Y Q+G + +AL F+++N + D AS L A+A
Sbjct: 398 DANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASA 457
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A+V G +H VI+ G SV S LVDMY+ CG + I+VF+ M +RNI+ +N+
Sbjct: 458 NLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPDRNIVCWNA 517
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I +G F F D+IE GL PD +F ++L AC H GLV F MT+ Y
Sbjct: 518 LISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVY 577
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
+ + +HY M+ +L +G EA + I +P D + ++L+ C I+ N DLA+
Sbjct: 578 KLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSCRIHKNQDLAKKA 637
Query: 498 AHQLFENDP-RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A QLF+ D R A V +SN YAE G+W++ K++ + + G++K SWV
Sbjct: 638 ADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVTAYSWV 690
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 220/448 (49%), Gaps = 7/448 (1%)
Query: 29 VAKASLLRD--PFYATKLVRL----YALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+AKA L D P+ T V + Y + L AR LF+ R+ W +I Y+
Sbjct: 62 IAKARQLFDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQN 121
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
++ +A +L+ + R+ +KPD+ T+A + + + L + +H I G I
Sbjct: 122 NQPKEAFNLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVF 181
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LV +Y K +D A ++F + D V N MI+G+ GF +++L+LF M +
Sbjct: 182 NSLVDSYCKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQ 241
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P +T ++ + GQ IHG +K+S+ +V++ L+ Y++ + ++ A ++
Sbjct: 242 PSGFTFAAMLGMSVGSEDVIFGQQIHGLAIKTSYVWDIFVANALLDFYSKHDYIDLAKNL 301
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F+ + D V+++ +ITGY+ G Y K+ F++L A++L+ AA N+
Sbjct: 302 FDEMPELDGVSYNIIITGYAWNGQYEKSFDLFKRLQGTSFDRKNFPFATMLSVAAIELNL 361
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G H + V V +ALVDMY+KC ++F ++ RN + + ++I
Sbjct: 362 SMGRQTHAQAVVTTAVSEVQVGNALVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIY 421
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
GF +A + F+++ + ++ D++TF++ L A + V+ G+++ + + G+ +
Sbjct: 422 VQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHSSVI-RLGLLSS 480
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
+V + G++++A +P
Sbjct: 481 VFSGSVLVDMYANCGSMKDAIEVFKEMP 508
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 138/302 (45%), Gaps = 44/302 (14%)
Query: 236 FDSYDY--VSSV--LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
FD Y SSV +VS Y + + A +F S+F + V+W+ +I GYSQ +A
Sbjct: 69 FDEMPYRNTSSVNMMVSGYVKSRNLFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAF 128
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
+ ++ G K D + A++L+ + + IH ++I+ GF S++V ++LVD Y
Sbjct: 129 NLYTEMCRSGVKPDHITFATLLSGFDDTTTLKEVLQIHSHIIRFGFSASLIVFNSLVDSY 188
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
K L + Q+F M ++ +++N +I G +GF +A + F + P TF+
Sbjct: 189 CKTCCLDIASQLFSEMPTKDSVSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFA 248
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
A+L G+ +E I+ ++ GLA S++W
Sbjct: 249 AML-----------------------GMSVGSEDVIFGQQIHGLAIKT----SYVW---- 277
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVM 529
D V+ ALL Y D ++ A LF+ P +Y ++++ YA +G+++
Sbjct: 278 --DIFVANALLD---FYSKHDYIDL-AKNLFDEMPELDGVSYNIIITG-YAWNGQYEKSF 330
Query: 530 KL 531
L
Sbjct: 331 DL 332
>gi|413917687|gb|AFW57619.1| putative pentatricopeptide repeat family protein [Zea mays]
Length = 611
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 169/520 (32%), Positives = 256/520 (49%), Gaps = 26/520 (5%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP- 102
LV +Y A +FD+ R WNS++ A A A DA +L + +L
Sbjct: 63 LVAMYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASA---TDALALLRRMLSAAPGAA 119
Query: 103 --DNFTYACITRACSENSDLPG---LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
D+ T + AC+ G L VHG A GL + +AL+TAY + S
Sbjct: 120 ACDHATLTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGS 179
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +VFDG++D +++ +M+SG A + +SL LF M R V +
Sbjct: 180 AERVFDGMADRNVITWTAMVSGMARAERYSESLSLFRQMRRA---------VDANRASYS 230
Query: 218 PSLLSV--------GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHP 269
SLL+ GQ IHG +K+ ++ +V S L+ MY++C M A VF S P
Sbjct: 231 SSLLACAGSRAAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDP 290
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
D V+ + ++ G++Q G +A F ++ +G + D ++++VL A SA G IH
Sbjct: 291 DEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIH 350
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
I+ F + V + L++MYSKCG L I+VF+ +N +T+NS+I HG +
Sbjct: 351 ALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGW 410
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYM 449
+ F F + G+ P + TF +LL C H G G EI M +YGI K EHY +
Sbjct: 411 EVFGLFESMEADGVKPTDVTFLSLLHGCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACV 470
Query: 450 VKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKG 509
V +LG A L++A +FI P + +L+ C + NS + E A +L DP
Sbjct: 471 VDMLGRASQLDDAKAFIEDGPFKDSALLWQSLMGACSFHKNSGVGECAAEKLLLLDPDCT 530
Query: 510 AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A V+LSN Y+ +GRWDD ++ + GLRK+ G SW+
Sbjct: 531 AAYVLLSNVYSSEGRWDDRARIMKRMRARGLRKDTGKSWI 570
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HAL K + + L+ +Y+ L + +FD TP ++ WNSII AYA
Sbjct: 347 KQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARH 406
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ LF+++ +KP + T+ + CS
Sbjct: 407 GHGWEVFGLFESMEADGVKPTDVTFLSLLHGCS 439
>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
Length = 793
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 156/554 (28%), Positives = 277/554 (50%), Gaps = 70/554 (12%)
Query: 29 VAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDA 88
V K D + L+ +YA+ L AR +FD + + WNS++ Y L +A
Sbjct: 152 VLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEA 211
Query: 89 KSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
K ++ + P+ R+ I S++++
Sbjct: 212 KDVYDRM------PE---------------------------------RNVIASNSMIVL 232
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
+ K ++EA K+F+ + DLV +++IS + ++++L LF M G DE +
Sbjct: 233 FGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVV 292
Query: 209 VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC--------------- 253
+ ++S ++ G+ +HG +K ++Y + + L+ MY+ C
Sbjct: 293 LSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCC 352
Query: 254 ------NCMNSAY----------HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
N M S Y +F+S+ D V+WSA+I+GY+QQ + + L F+++
Sbjct: 353 LDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQDRFTETLVLFQEM 412
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
++G K D ++ SV++A A + G IH Y+ ++G ++++++ + L++MY K G +
Sbjct: 413 QIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCV 472
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
++VF+ + E+ + T+N++ILGL ++G ++ + F ++ E G+ P+E TF A+L AC
Sbjct: 473 EDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGAC 532
Query: 418 CHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAV 477
H GLV++G F M +E+ I +HY MV LLG AG L+EA I S+P D +
Sbjct: 533 RHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVST 592
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
GALL C YG+++ E + +L E P + V+LSN YA G W DV+++R +
Sbjct: 593 WGALLGACKKYGDNETGERIGRKLVELHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQ 652
Query: 538 NGLRKEAGVSWVSG 551
+G+ K G S +
Sbjct: 653 HGVVKTPGCSMIEA 666
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/463 (22%), Positives = 209/463 (45%), Gaps = 84/463 (18%)
Query: 8 LVLELSKSH-QSLSRTKELHALVAKASL---LRDPFYATKLVRLYALNNVLPSARI---- 59
L L + ++H Q K+ + ++++ L +D F A++L++ + LP I
Sbjct: 24 LTLPILETHLQKCQNIKQFNQILSQMILSGFFKDSFAASRLLKF---STELPFININQSY 80
Query: 60 -LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN- 117
+F + F+ N++++ Y + A ++K +L + + DN+TY + ++CS
Sbjct: 81 QIFSHIENPNGFICNTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILFQSCSIRL 140
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
++ G + + + G D + L+ Y+ + +A KVFDG S D+V NSM+
Sbjct: 141 AEFDG-KCIQDHVLKVGFDSDVYIQNTLINMYAVCGNLSDARKVFDGSSVLDMVSWNSML 199
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
+G+ G +++ ++D M P+ +
Sbjct: 200 AGYVLVGNVEEAKDVYDRM------PERNVI----------------------------- 224
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
S+ ++ ++ + + A +FN + DLV+WSALI+ Y Q Y +AL F+++
Sbjct: 225 ----ASNSMIVLFGKKGNVEEACKLFNEMKQKDLVSWSALISCYEQNEMYEEALILFKEM 280
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS----- 352
N G D V++ SVL+A ++ V G ++HG V++ G E V + +AL+ MYS
Sbjct: 281 NANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEV 340
Query: 353 --------------------------KCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
KCG + +F++M +++ ++++++I G
Sbjct: 341 VTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQD 400
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ F+++ +G PDE+ +++ AC H ++ G+ I
Sbjct: 401 RFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWI 443
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 188/429 (43%), Gaps = 68/429 (15%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLID--EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I+SG +DS +S L+ ++L I+ ++ ++F + +P+ +CN+M+ G+ K
Sbjct: 50 ILSGFFKDSFAASRLLKFSTELPFININQSYQIFSHIENPNGFICNTMMKGYMQRNSPCK 109
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
++ ++ +ML D YT L G+ I LK FDS Y+ + L++
Sbjct: 110 AIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFDGKCIQDHVLKVGFDSDVYIQNTLIN 169
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA C ++ A VF+ D+V+W++++ GY G+ +A + ++
Sbjct: 170 MYAVCGNLSDARKVFDGSSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMP---------- 219
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
E +V+ S++++ ++ K G + ++F M
Sbjct: 220 -----------------------------ERNVIASNSMIVLFGKKGNVEEACKLFNEMK 250
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
++++++++++I + +A F+++ G+ DE ++L AC +V G+
Sbjct: 251 QKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKL 310
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC--H 486
+ +G+ K Y+ NL+ A ++S + V A SCC
Sbjct: 311 V-------HGLVVKVGIETYV--------NLQNALIHMYSSCEEVVTAQKLFSESCCLDQ 355
Query: 487 IYGNSDLAEIV-------AHQLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
I NS ++ V A LF++ P K ++ M+S YA+ R+ + + L ++
Sbjct: 356 ISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISG-YAQQDRFTETLVLFQEMQI 414
Query: 538 NGLRKEAGV 546
G + + +
Sbjct: 415 EGTKPDETI 423
>gi|225452922|ref|XP_002278886.1| PREDICTED: pentatricopeptide repeat-containing protein At3g29230
[Vitis vinifera]
Length = 594
Score = 261 bits (668), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 279/536 (52%), Gaps = 18/536 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL++ K++HA V KA+L R+ F KL+ ++L + A +F++ V L+N++IR
Sbjct: 29 SLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLIR 88
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A+ A S+F + + + DNFTY + +ACS + + +H G
Sbjct: 89 AHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFCL 148
Query: 138 DSITSSALVTAYSKLSL--IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D ++L+ +Y K L + A KVF+ +++ D V NSMI G G ++ +LFD
Sbjct: 149 DIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEARRLFDE 208
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSL---LSVGQGIHGFCLKSSFDSYDYVS-SVLVSMYA 251
M P+ T+ W L + G+ F L + + VS S +V Y+
Sbjct: 209 M------PERDTVS------WNTILDGYVKAGEMNAAFELFEKMPARNVVSWSTMVLGYS 256
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+ M+ A +F+ + +LV W+ +I+GY+++G A+ + ++ G K D + S
Sbjct: 257 KAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDGTVIS 316
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
+L+A A S + G +H + + F+ S VS+AL+DMY+KCG L + +F M ++
Sbjct: 317 ILSACAVSGLLGLGKRVHASIERTRFKCSTPVSNALIDMYAKCGSLENALSIFHGMVRKD 376
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++++N++I GL +HG +A + F + +G PD+ TF +LCAC H G V++G F
Sbjct: 377 VVSWNAIIQGLAMHGHGEKALQLFSRMKGEGFVPDKVTFVGVLCACTHAGFVDEGLHYFH 436
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M +YG+ + EHY MV LLG G L+EA+ + S+P + + G LL C ++ +
Sbjct: 437 AMERDYGVPPEVEHYGCMVDLLGRGGRLKEAFRLVHSMPLEPNAIIWGTLLGACRMHSAT 496
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
LAE V +L +++ MLSN YA G WD+ +R + ++K +G S
Sbjct: 497 GLAEEVFDRLVKSELSDSGNLSMLSNIYAAAGDWDNFANIRLRMKSTSIQKPSGGS 552
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 155/357 (43%), Gaps = 25/357 (7%)
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
S L ++ +H + + L R+S L+ A+S + A+ VF+ + DPD++L N++I
Sbjct: 28 SSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDVLLYNTLI 87
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
+ +F M G D +T L+ + V + IH K F
Sbjct: 88 RAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKACSGKVWVRVVEMIHAQVEKMGFC 147
Query: 238 SYDYVSSVLVSMYARC--NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
+V + L+ Y +C + + +A VF + D V+W+++I G + G+ G+A R
Sbjct: 148 LDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGELGEA----R 203
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL-------SVMVSSALV 348
+L + + D V ++L K+ + FEL +V+ S +V
Sbjct: 204 RLFDEMPERDTVSWNTILDGYVKAGE-----------MNAAFELFEKMPARNVVSWSTMV 252
Query: 349 DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDES 408
YSK G + + +F+ M +N++ + +I G G A + + E GL D+
Sbjct: 253 LGYSKAGDMDMARILFDKMPVKNLVPWTIMISGYAEKGLAKDAINLYNQMEEAGLKFDDG 312
Query: 409 TFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
T ++L AC GL+ G+ + + E + T ++ + G+LE A S
Sbjct: 313 TVISILSACAVSGLLGLGKRVHASI-ERTRFKCSTPVSNALIDMYAKCGSLENALSI 368
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 150/340 (44%), Gaps = 54/340 (15%)
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
IS L S L+ + IH LK++ +V L++ ++ C M A +VFN + PD+
Sbjct: 21 ISDLHRCSSLNQVKQIHAQVLKANLHRESFVGQKLIAAFSLCRQMTLAVNVFNQIQDPDV 80
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV--IH 329
+ ++ LI + + + A F ++ G AD +L A S VW V IH
Sbjct: 81 LLYNTLIRAHVRNSEPLLAFSVFFEMQDSGVCADNFTYPFLLKAC--SGKVWVRVVEMIH 138
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGI--QVFETMSERNIITYNSVILGLGLHGF 387
V + GF L + V ++L+D Y KCG G+ +VFE M+ER+ +++NS+I GL G
Sbjct: 139 AQVEKMGFCLDIFVPNSLIDSYFKCGLDGVAAARKVFEVMAERDTVSWNSMIGGLVKVGE 198
Query: 388 TYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYI 447
+A F ++ E+ D +++ +L G +N E+F +M
Sbjct: 199 LGEARRLFDEMPER----DTVSWNTILDGYVKAGEMNAAFELFEKMP------------- 241
Query: 448 YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPR 507
A N+ + + K G+ D+A I LF+ P
Sbjct: 242 --------ARNVVSWSTMVLGYSKA----------------GDMDMARI----LFDKMPV 273
Query: 508 KG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
K + +M+S YAE G D + L + + + GL+ + G
Sbjct: 274 KNLVPWTIMISG-YAEKGLAKDAINLYNQMEEAGLKFDDG 312
>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
Length = 864
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 166/537 (30%), Positives = 265/537 (49%), Gaps = 2/537 (0%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
LS ++LHA K D T +V +YA L AR F P +V N+++
Sbjct: 268 LSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETCNAMMVG 327
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGR 137
+A LF+ + R+ + D + + + AC+E GL+ VH A+ SG
Sbjct: 328 LVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQ-VHCLAVKSGFDV 386
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D +A++ Y K + EA VF + D V N++I+ ++ ++ + ML
Sbjct: 387 DVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAHLNEML 446
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R G PD++T ++ L G +HG +KS +VSS +V MY +C +
Sbjct: 447 RSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAIT 506
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A + + + +LV+W+++I+G+S +A +F ++ G K D A+VL A
Sbjct: 507 EAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCA 566
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G IHG +I+ +SS LVDMY+KCG + + +FE + + +++N+
Sbjct: 567 NLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNA 626
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G LHG +A E F + + P+ +TF A+L AC H GL++DG + F MT Y
Sbjct: 627 MICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDDGCQYFHLMTSRY 686
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
+ + EH+ MV +LG + +EA FI S+P D V LLS C I + ++AE
Sbjct: 687 KLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSICKIRQDVEVAETA 746
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
A + DP + ++LSN YA G+W DV + R + LRKE G SW+ S
Sbjct: 747 ASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPGCSWIEVQSE 803
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/454 (26%), Positives = 208/454 (45%), Gaps = 18/454 (3%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTK------------------ELHALVAKASLLRDPFYAT 42
MF N L +E+S+ +L RT ++HAL K L D +
Sbjct: 131 MFRNSVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGS 190
Query: 43 KLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP 102
LV +Y L A F +R+ W + I ++ LF + R L
Sbjct: 191 ALVDMYGKCRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGV 250
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
YA R+C+ L R +H AI + D + +A+V Y+K + +A + F
Sbjct: 251 SQPAYASAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAF 310
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
G+ ++ CN+M+ G G +++QLF +M R G D +L G+ S E
Sbjct: 311 IGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYF 370
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G +H +KS FD V + ++ +Y +C + AY VF + D V+W+A+I
Sbjct: 371 QGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALE 430
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
Q Y + + ++ G + D SVL A A ++ G V+HG I+ G L
Sbjct: 431 QNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAF 490
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
VSS +VDMY KCG + ++ + + + ++++NS+I G L + +A FF ++++ G
Sbjct: 491 VSSTVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMG 550
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+ PD T++ +L C + + G++I ++ ++
Sbjct: 551 VKPDHFTYATVLDTCANLATIELGKQIHGQIIKQ 584
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 200/460 (43%), Gaps = 36/460 (7%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H L S +L+ + HA + + + F + L+++YA A +FD P
Sbjct: 22 HLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMP 81
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKN------------------------------- 94
R WN+++ AY A + A SLF
Sbjct: 82 HRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSME 141
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+ R + D T A + ++C DL +H A+ +GL D SALV Y K
Sbjct: 142 MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRS 201
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+D+A++ F G+ + + V + I+G + + ++LF M RLG +
Sbjct: 202 LDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRS 261
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
LS + +H +K+ F S V + +V +YA+ + A F L H ++ T
Sbjct: 262 CAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKAGNLVDARRAFIGLPHHNVETC 321
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+A++ G + G +A+ F+ + G D + ++ V +A A+ + G +H ++
Sbjct: 322 NAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCLAVK 381
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF++ V V +A++D+Y KC L VF+ M +R+ +++N++I L +
Sbjct: 382 SGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYEDTIAH 441
Query: 395 FRDIIEKGLNPDESTFSALLCACC-----HGGLVNDGREI 429
+++ G+ PD+ T+ ++L AC GLV G+ I
Sbjct: 442 LNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAI 481
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 125/277 (45%), Gaps = 10/277 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ QSL +H K+ L D F ++ +V +Y + A+ L D+ +
Sbjct: 460 VLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTVVDMYCKCGAITEAQKLHDRIGGQE 519
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WNSII ++L + +A+ F +L +KPD+FTYA + C+ + + + +HG
Sbjct: 520 LVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPDHFTYATVLDTCANLATIELGKQIHG 579
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I + D SS LV Y+K + +++ +F+ D V N+MI G+A G +
Sbjct: 580 QIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEKARKLDFVSWNAMICGYALHGQGLE 639
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--- 245
+L++F+ M R P+ T V ++ LL G F L +S Y V +
Sbjct: 640 ALEMFERMQRANVVPNHATFVAVLRACSHVGLLD--DGCQYFHLMTS--RYKLVPQLEHF 695
Query: 246 --LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALIT 279
+V + R A S+ D V W L++
Sbjct: 696 ACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLS 732
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 120/283 (42%), Gaps = 32/283 (11%)
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH---------- 268
S L+ GQ H L S F +VS+ L+ MYARC A+ VF+++ H
Sbjct: 33 SALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDTVSWNTML 92
Query: 269 ---------------------PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
PD+V+W+ LI+GY Q G + ++ +++ +G D
Sbjct: 93 TAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGLSMEMSRRGVALDRT 152
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+A +L + ++ G IH ++ G E V SALVDMY KC L ++ F M
Sbjct: 153 TLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRSLDDALRFFHGM 212
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ERN +++ + I G + + E F + GL + +++ +C ++ R
Sbjct: 213 GERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFRSCAAMPCLSTAR 272
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
++ + + +V + AGNL +A LP
Sbjct: 273 QLHAHAIKNV-FSSDRVVGTAIVDVYAKAGNLVDARRAFIGLP 314
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L A+A + + G H ++ GF + VS+ L+ MY++CG VF+TM R+
Sbjct: 26 LCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFDTMPHRDT 85
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++N+++ G T A F + +PD +++ L+ C G+ + +
Sbjct: 86 VSWNTMLTAYVHAGDTDTAASLFGTMP----DPDVVSWNTLISGYCQHGMFRNSVGLSME 141
Query: 433 MTEE 436
M+
Sbjct: 142 MSRR 145
>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 999
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 159/532 (29%), Positives = 259/532 (48%), Gaps = 28/532 (5%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K+ H+ KA + D L+ LY + + +A F
Sbjct: 367 ALPNGKQFHSYAIKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFF---------------L 411
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y N + +F + + P+ FTY I + C+ +H + +G
Sbjct: 412 CYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQF 471
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
+ SS L+ Y+K +D A+K+F + + D+V +MI+G+ + ++L LF M
Sbjct: 472 NVYVSSVLIDMYAKHGKLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQ 531
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G D IS L G+ IH S + + + LVS+YARC +
Sbjct: 532 DQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKVR 591
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
AY F+ ++ D V+W++L++G++Q G + +AL F ++N G + + S ++AAA
Sbjct: 592 EAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAAA 651
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
ANV G IHG + + G++ VS+AL+ +Y+KCG + + I++NS
Sbjct: 652 NIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTI-------------DDISWNS 698
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G HG ++A + F D+ + + P+ TF +L AC H GLV++G F M+E +
Sbjct: 699 MITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAH 758
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
+ K EHY +V LLG +G L A F+ +P D V LLS C+++ N D+ E
Sbjct: 759 NLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEFA 818
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A L E +P+ A V++SN YA G+WD + R + D G++KE G SWV
Sbjct: 819 ASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWV 870
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 201/439 (45%), Gaps = 35/439 (7%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
R + KL+ Y L A +FD+ P RS+ WN I + LF+ +
Sbjct: 95 RSFYDGLKLIDFYLAFGDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGRVPGLFRRM 154
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFV---HGGAIVSGLGRDSITSSALVTAYSKL 152
L ++ D +A + R CS N+ RFV H I SG + + L+ Y K
Sbjct: 155 LTKNVEFDERIFAVVLRGCSGNA--VSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKN 212
Query: 153 SLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI 212
+ A KVF+ + D V +MISG + G+ ++++ LF ++ +
Sbjct: 213 GFLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQIV--------------L 258
Query: 213 SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLV 272
S + G+ +HG LK F S YV + LV++Y+R ++SA +F+ + D V
Sbjct: 259 SACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRV 318
Query: 273 TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYV 332
++++LI+G +QQG +AL F+K+N+ +K D V +AS+L+A A + G H Y
Sbjct: 319 SYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYA 378
Query: 333 IQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
I+ G ++V +L+D+Y KC +I T + L G ++F
Sbjct: 379 IKAGMTSDIVVEGSLLDLYVKCS---------------DIKTAHEFFLCYGQLDNLNKSF 423
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKL 452
+ F + +G+ P++ T+ ++L C G + G +I T++ + G Q ++ +
Sbjct: 424 QIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKT-GFQFNVYVSSVLIDM 482
Query: 453 LGLAGNLEEAYSFIWSLPK 471
G L+ A L +
Sbjct: 483 YAKHGKLDHALKIFRRLKE 501
>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Glycine max]
Length = 693
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 170/546 (31%), Positives = 270/546 (49%), Gaps = 68/546 (12%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLF--- 92
+D F +L+ LYA L A+ +FD +R V+ WN+++ AYA + +F
Sbjct: 56 KDSFIHNQLLHLYAKFGKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQM 115
Query: 93 -------------------------KNLLRTQ---LKPDNFTYACITRACSENSDLPGLR 124
K L+R Q +P +++ +ACS+ DL +
Sbjct: 116 PYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGK 175
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG +V+ LG ++ +A+ Y+K ID+A +FDG+ D ++V N MISG+ G
Sbjct: 176 QIHGRIVVADLGENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMG 235
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++ + LF+ M G PD T VS+
Sbjct: 236 NPNECIHLFNEMQLSGLKPDLVT----------------------------------VSN 261
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
VL + Y RC ++ A ++F L D + W+ +I GY+Q G A F + + K
Sbjct: 262 VL-NAYFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKP 320
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D I+S++++ AK A+++ G V+HG V+ G + S++VSSALVDMY KCG +F
Sbjct: 321 DSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIF 380
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
ETM RN+IT+N++ILG +G +A + + ++ PD TF +L AC + +V
Sbjct: 381 ETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVK 440
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+G++ F ++ E+GI +HY M+ LLG +G++++A I +P + + LLS
Sbjct: 441 EGQKYFDSIS-EHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSV 499
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C G+ AE+ A LFE DPR +MLSN YA GRW DV +R + + +K A
Sbjct: 500 C-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVAVVRSLMKEKNAKKFA 558
Query: 545 GVSWVS 550
SWV
Sbjct: 559 AYSWVE 564
>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g13770, mitochondrial-like [Glycine max]
Length = 634
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 236/410 (57%), Gaps = 2/410 (0%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L+ Y K + +A VFD + + ++V +MIS ++ G+ ++L LF MLR G
Sbjct: 97 TRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTE 156
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+E+T +++ S +G+ IH +K +++++ YV S L+ MYA+ ++ A +
Sbjct: 157 PNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGI 216
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F L D+V+ +A+I+GY+Q G +AL FR+L +G +++ V SVL A + A +
Sbjct: 217 FQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAAL 276
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G +H ++++ V++ ++L+DMYSKCG L ++F+T+ ER +I++N++++G
Sbjct: 277 DHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGY 336
Query: 383 GLHGFTYQAFEFFRDII-EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE-EYGIQ 440
HG + E F +I E + PD T A+L C HGGL + G +IF MT + +Q
Sbjct: 337 SKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQ 396
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
++HY +V +LG AG +E A+ F+ +P A+ G LL C ++ N D+ E V HQ
Sbjct: 397 PDSKHYGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQ 456
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L + +P V+LSN YA GRW+DV LR+ ++ + KE G SW+
Sbjct: 457 LLQIEPENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIE 506
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 189/402 (47%), Gaps = 33/402 (8%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+++ + +HA + K L + T+L+ Y + L AR +FD P+R+V W ++I
Sbjct: 72 RAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPERNVVSWTAMI 131
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
AY+ + A SLF +LR+ +P+ FT+A + +C +S R +H I
Sbjct: 132 SAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNYE 191
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S+L+ Y+K I EA +F + + D+V C ++ISG+A G +++L+LF +
Sbjct: 192 AHVYVGSSLLDMYAKDGKIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRL 251
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
R G + T +++ L + L G+ +H L+S SY + + L+ MY++C +
Sbjct: 252 QREGMQSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNL 311
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAA 315
A +F++L +++W+A++ GYS+ G+ + L F + + K K D V + +VL+
Sbjct: 312 TYARRIFDTLHERTVISWNAMLVGYSKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSG 371
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ HG + G ++ ++S + + + Y
Sbjct: 372 CS-----------HGGLEDKGMDIFYDMTSGKISVQPDSKH------------------Y 402
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
V+ LG G AFEF + + P + + LL AC
Sbjct: 403 GCVVDMLGRAGRVEAAFEFVKKM---PFEPSAAIWGCLLGAC 441
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 9/165 (5%)
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
+VL + + G +H ++I+ + V + + L+ Y KC L VF+ M ER
Sbjct: 63 TVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVMPER 122
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
N++++ ++I G+ QA F ++ G P+E TF+ +L +C GR+I
Sbjct: 123 NVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIH 182
Query: 431 TRMTEEYGIQAKTEHYIY----MVKLLGLAGNLEEAYSFIWSLPK 471
+ + I+ E ++Y ++ + G + EA LP+
Sbjct: 183 SHI-----IKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLPE 222
>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/448 (31%), Positives = 243/448 (54%), Gaps = 1/448 (0%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D Y + + C+ L R VH + S D + + L+ Y+K ++EA KVF
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
+ + D V ++ISG++ +L F+ MLR G +P+E+TL +I
Sbjct: 119 EKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
G +HGFC+K FDS +V S L+ +Y R M+ A VF++L + V+W+ALI G++
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
++ KAL F+ + G + AS+ A + + + G +H Y+I+ G +L
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
+ L+DMY+K G + ++F+ +++R+++++NS++ HGF +A +F ++ G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 403 LNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
+ P+E +F ++L AC H GL+++G + M ++ GI + HY+ +V LLG AG+L A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 463 YSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAED 522
FI +P A+ ALL+ C ++ N++L A +FE DP V+L N YA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 523 GRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
GRW+D ++R + ++G++KE SWV
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVE 505
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 4/413 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA + ++ D L+ +YA L AR +F+K PQR W ++I Y+ R
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
DA F +LR P+ FT + + +A + +HG + G + SA
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y++ L+D+A VFD + + V N++I+G A +K+L+LF MLR G P
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++ L L G+ +H + +KS + + L+ MYA+ ++ A +F+
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L D+V+W++L+T Y+Q G +A+++F ++ G + + + SVL A + S +
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLG 383
G + + + G +VD+ + G L ++ E M E + +++
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREIFTRMTE 435
+H T + E L+PD+ +L GG ND + +M E
Sbjct: 442 MHKNTELGAYAAEHVFE--LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 5/260 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH K + + L+ LY ++ A+++FD R+ WN++I +A
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF+ +LR +P +F+YA + ACS L ++VH I SG + +
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ Y+K I +A K+FD ++ D+V NS+++ +A GF +++ F+ M R+G P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF--DSYDYVSSVLVSMYARCNCMNSAYH 261
+E + + +++ LL G + K +++ YV+ +V + R +N A
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT--VVDLLGRAGDLNRALR 419
Query: 262 VFNSL-FHPDLVTWSALITG 280
+ P W AL+
Sbjct: 420 FIEEMPIEPTAAIWKALLNA 439
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K +HA + K+ F L+ +YA + + AR +FD+ +R V WNS++ A
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
YA +A F+ + R ++P+ ++ + ACS +
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 766
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 159/538 (29%), Positives = 263/538 (48%), Gaps = 31/538 (5%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN- 94
RD F ++ Y N L AR LFD P++ V WNS++ YA ++A+ +F N
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 95 ----------LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI-VSGLG------- 136
LL + AC+ + DL + GG + LG
Sbjct: 169 PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD 228
Query: 137 ----RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
RD+I+ + +++ Y++ + +A ++FD D+ +M+SG+ G D++
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTF 288
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
FD M +E + +I+G + + + + + + S++ +++ Y +
Sbjct: 289 FDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN----TMITGYGQ 340
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ A F+ + D V+W+A+I GY+Q G Y +AL F ++ G+ +
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+ A A + G IHG ++ G+ V +AL+ MY KCG + FE + E+++
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++N+++ G HGF QA F + G+ PDE T +L AC H GL++ G E F
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYS 520
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
MT++YG+ ++HY M+ LLG AG LEEA I ++P A GALL I+GN++
Sbjct: 521 MTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTE 580
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E A +F+ +P+ V+LSN YA GRW D K+R + D G++K G SWV
Sbjct: 581 LGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVE 638
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+RD ++ YA L AR LFD++P R VF W +++ Y ++AK+ F
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDE 291
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+ + + +Y + + + R + S R+ + + ++T Y ++
Sbjct: 292 M----PEKNEVSYNAMIAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGD 343
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
I +A K FD + D V ++I+G+A G ++++L +F + + G++ + T +S
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ + L +G+ IHG +K + + +V + L++MY +C ++ A F + D+V+W
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+ ++ GY++ G +AL F + G K D + + VL+A + +
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 150/347 (43%), Gaps = 54/347 (15%)
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM- 196
D + + ++ + + D A+ VF+ + V N+MISG+ ++ + LFD M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 197 -----------------LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC--LKSSFD 237
RLG + L+ + SLLS G +G+ + FD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLS-GYAQNGYVDEAREVFD 166
Query: 238 SYDYVSSV----LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ +S+ L++ Y + A +F S DL++W+ L+ G+ ++ G A +
Sbjct: 167 NMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWL 226
Query: 294 FRKLNMQGKKADPVLIASV-----LAAAAKSANVWP-------GAVIHGYVIQHGF---- 337
F K+ ++ + +I+ L+ A + + P A++ GYV Q+G
Sbjct: 227 FDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYV-QNGMLDEA 285
Query: 338 --------ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
E + + +A++ Y + + + ++FE+M RNI ++N++I G G G
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
QA +FF + ++ D +++A++ G + +F + ++
Sbjct: 346 QARKFFDMMPQR----DCVSWAAIIAGYAQSGHYEEALNMFVEIKQD 388
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 120/299 (40%), Gaps = 74/299 (24%)
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
V DPD++ N IS G D +L +F+ M R
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPR-------------------------- 77
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+SS SY+ ++S Y R + N A ++F+ + DL +W+ ++TGY +
Sbjct: 78 --------RSSV-SYN----AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRN 124
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV-----------------WPG-- 325
G A R+L + D V S+L+ A++ V W G
Sbjct: 125 CRLGDA----RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLL 180
Query: 326 -AVIHGYVIQHG---FE----LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A +H I+ FE ++ + L+ + + LG +F+ M R+ I++N+
Sbjct: 181 AAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNT 240
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+I G G QA R + ++ D T++A++ G++++ + F M E+
Sbjct: 241 MISGYAQGGGLSQA----RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++H K F L+ +Y + A F+ ++ V WN+++
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
YA A ++F+++ +KPD T + ACS
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
>gi|115468918|ref|NP_001058058.1| Os06g0611200 [Oryza sativa Japonica Group]
gi|113596098|dbj|BAF19972.1| Os06g0611200 [Oryza sativa Japonica Group]
Length = 615
Score = 261 bits (668), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 264/533 (49%), Gaps = 7/533 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LH A+A LL D + A L+ Y L LP A FD P+R V +SI+ A+ A
Sbjct: 60 LHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 119
Query: 84 RFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A + +++L + P+ + +AC+ D +HG +V G G D +
Sbjct: 120 MPRRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRGFGDDGV 179
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
S+LV Y ++ +A KVF+ + PD + S+IS F +++++++ F ML +
Sbjct: 180 VLSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMN 239
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD T +++ L S G+ H + V S + MYA+C M A
Sbjct: 240 GVRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEA 299
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + + V+ AL+ GY Q G+Y K + FR+ M + D + +VL A A
Sbjct: 300 RKVFDRMQVRNEVSRCALLGGYCQNGEYEKVIALFRE--MDKEDGDWYSLGTVLRACAGL 357
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++V PG IH ++ V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 358 SSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMI 417
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A F ++ +G PD +F +L AC H G+V GR F M ++YGI
Sbjct: 418 GGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGI 477
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV L LEEA I P D ++ +L + N D+AE V+
Sbjct: 478 APGIEHYNCMVDLFSRVELLEEAEDLINKSPFRNDSSLWADILGASATHSNPDVAERVSK 537
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
++ E +P+ ++L N Y GRW+D +++R + ++KE G+SWV +
Sbjct: 538 KMMELEPQYHLSYILLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWVDAN 590
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S+ ++ HA V L + + + +YA ++ AR +FD+ R+ +++ Y
Sbjct: 262 SQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQVRNEVSRCALLGGY 321
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +LF+ + + D ++ + RAC+ S + + +H + RD
Sbjct: 322 CQNGEYEKVIALFREM--DKEDGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMAGWRDV 379
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ SALV Y+K +D A VF+ + + + N+MI GFA G ++++ LF+ M+R
Sbjct: 380 VVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNGHGERAINLFNRMVRE 439
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD + +G++ ++ G+ + C + +V +++R +
Sbjct: 440 GPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGIAPGIEHYNCMVDLFSRVELLEE 499
Query: 259 AYHVFN-SLFHPDLVTWSALI 278
A + N S F D W+ ++
Sbjct: 500 AEDLINKSPFRNDSSLWADIL 520
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + + RD + LV LYA + A +F+ + R+
Sbjct: 350 VLRACAGLSSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRN 409
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVH 127
WN++I +A A +LF ++R +PD ++ + ACS + G + +
Sbjct: 410 TITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFN 469
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
G+ + +V +S++ L++EA
Sbjct: 470 SMCKDYGIAPGIEHYNCMVDLFSRVELLEEA 500
>gi|147836510|emb|CAN70889.1| hypothetical protein VITISV_005594 [Vitis vinifera]
Length = 630
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 171/555 (30%), Positives = 283/555 (50%), Gaps = 26/555 (4%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +++ L +H + K+ L + F A L+ +YA + A LFD P ++
Sbjct: 48 VLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLFDHMPDKT 107
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W S++ + F++ S+F +L T L+P+ +T A I +AC++ DL ++ +H
Sbjct: 108 VVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQACAQKRDLKLVQLIHC 166
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I +G D+ ++L+ Y+K + A K+ + D+V S+ISG G +K
Sbjct: 167 HIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCVLNGMVEK 226
Query: 189 SLQLFDWMLRLGKTPD----EY----TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
+L F M G +P+ +Y T+ L+ G L +G+ IHG+ +K F
Sbjct: 227 ALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIKHGFFPCT 286
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + L+ MYA ++A+ +F + D+V+W+ +I+ + +AL +++
Sbjct: 287 IVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALMLLSEVHSN 346
Query: 301 GKK----ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
G D V I + + A + A++ G VIHGY+ + G + V ++LVDMY KCG
Sbjct: 347 GGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAGLICDIFVQNSLVDMYGKCGR 406
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN-PDESTFSALLC 415
L L +V E M R++ ++NS+I G++G A F+ + G + P+ TF+ +L
Sbjct: 407 LHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFKQLKNTGAHRPNAITFTNILS 466
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
AC H GLV +G EIF M EY ++ + EH+ M +FI +P P
Sbjct: 467 ACAHAGLVAEGFEIFKSMKREYSLEPRIEHFACM-----------RPEAFIQKMPFEPGP 515
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
V GALL C ++GN D+AE VA +L +P+ A++V LSN YA +W+D K+R ++
Sbjct: 516 EVWGALLGGCGLFGNLDIAERVAKKLXILEPKSRAWRVALSNVYASVNKWEDAAKVRAEM 575
Query: 536 -VDNGLRKEAGVSWV 549
L+KE G S V
Sbjct: 576 RRSEELQKEGGWSSV 590
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 161/327 (49%), Gaps = 13/327 (3%)
Query: 103 DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF 162
D+ T + +C+ N DL +H + SGL + +++L+ Y+K I++A K+F
Sbjct: 41 DSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKLF 100
Query: 163 DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLS 222
D + D +V SM+SG G +D+ + +F W + P+EYTL ++ + L
Sbjct: 101 DHMPDKTVVSWTSMMSGHCQRGAFDEVISIF-WRMLETLQPNEYTLAVILQACAQKRDLK 159
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ Q IH +K+ F ++ + L+ Y + + +A + L D+V+W+++I+G
Sbjct: 160 LVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICRDVVSWTSVISGCV 219
Query: 283 QQGDYGKALYYFRKLNMQGKKAD--------PVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
G KAL +F ++ G + IA++L + S + G IHGY I+
Sbjct: 220 LNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKCLKLGEQIHGYQIK 279
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
HGF +V ++L+ MY++ Q+F MS R+I+++N++I L +YQA
Sbjct: 280 HGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISSLVKGSSSYQALML 339
Query: 395 FRDIIEKG----LNPDESTFSALLCAC 417
++ G + PD T A + AC
Sbjct: 340 LSEVHSNGGSDMIYPDFVTILASIQAC 366
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 145/345 (42%), Gaps = 24/345 (6%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
++L+ + L + +H + K + D F L+ Y + L +A L + R
Sbjct: 147 VILQACAQKRDLKLVQLIHCHIIKTGFVMDAFLQNSLIDGYTKSGTLVAAEKLMKRLICR 206
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD--------NFTYACITRACSENSD 119
V W S+I L A F + + P+ T A + + CS +
Sbjct: 207 DVVSWTSVISGCVLNGMVEKALLFFFEMQEDGVSPNTGDGQYLSTETIATLLQGCSHSKC 266
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L +HG I G +I ++L+ Y++ D A ++F +S D+V N+MIS
Sbjct: 267 LKLGEQIHGYQIKHGFFPCTIVENSLIYMYAENERDDAAFQLFRKMSCRDIVSWNTMISS 326
Query: 180 FAHCGFWDKSLQLFDWMLRLGKT----PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
++L L + G + PD T++ I + L +GQ IHG+ ++
Sbjct: 327 LVKGSSSYQALMLLSEVHSNGGSDMIYPDFVTILASIQACSSLASLQLGQVIHGYITRAG 386
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
+V + LV MY +C ++ A V + DL +W++LI Y G+ AL F+
Sbjct: 387 LICDIFVQNSLVDMYGKCGRLHLAEKVSEEMPVRDLGSWNSLIAAYGINGNGISALNVFK 446
Query: 296 KL-NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
+L N + + + ++L+A A H ++ GFE+
Sbjct: 447 QLKNTGAHRPNAITFTNILSACA-----------HAGLVAEGFEI 480
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
+D + VL++ A + ++ G+ IH +++ G +V V+++L+DMY+KCG + ++
Sbjct: 40 SDSLTAVRVLSSCAANRDLRLGSCIHTNILKSGLHTNVFVANSLMDMYAKCGRIEDAAKL 99
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
F+ M ++ ++++ S++ G G + F ++E L P+E T + +L AC
Sbjct: 100 FDHMPDKTVVSWTSMMSGHCQRGAFDEVISIFWRMLET-LQPNEYTLAVILQAC 152
>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera]
gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 218/396 (55%)
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+ A +FD + PD+VL N+M G+A ++ LF +L G PD+YT L+
Sbjct: 71 MQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKA 130
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
L G+ +H +K YV L++MY CN M+ A VF+ ++ P +VT+
Sbjct: 131 CASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTY 190
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+A+ITGY++ +AL FR+L + K V + SVL++ A + G +H YV +
Sbjct: 191 NAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKK 250
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+GF V V +AL+DMY+KCG L + VFE M+ R+ ++++I+ +HG +A
Sbjct: 251 NGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSL 310
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLG 454
F+++ + G PDE TF LL AC H GLV +G E F M ++YG+ +HY MV LLG
Sbjct: 311 FKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLG 370
Query: 455 LAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVM 514
AG LEEAY FI LP P + LLS C +GN +L + V Q+FE D G ++
Sbjct: 371 RAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYII 430
Query: 515 LSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
LSN A GRW+DV +R + + G+ K G S V
Sbjct: 431 LSNLCARAGRWEDVNYVRKLMNERGVVKIPGCSSVE 466
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 122/455 (26%), Positives = 203/455 (44%), Gaps = 38/455 (8%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS---ARILFDKTPQ 66
L L SL K+L A K L D TK + +LN S A LFD+ PQ
Sbjct: 24 LSLLPKCTSLRELKQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQ 83
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+ L+N++ R YA A +LF +L + L PD++T+ + +AC+ L R +
Sbjct: 84 PDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQL 143
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H AI GL + L+ Y+ + +D A +VFD + +P +V N+MI+G+A
Sbjct: 144 HCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRP 203
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+++L LF + P + T++ ++S L +G+ +H + K+ F+ + V + L
Sbjct: 204 NEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTAL 263
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+C ++ A VF ++ D WSA+I Y+ G KA+ F+++ G + D
Sbjct: 264 IDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDE 323
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ +L A + H +++ GFE M K G +
Sbjct: 324 ITFLGLLYACS-----------HTGLVEEGFEY-------FYGMRDKYGVIP-------- 357
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
I Y ++ LG G +A+EF I+ + P + LL AC G V G
Sbjct: 358 ----GIKHYGCMVDLLGRAGRLEEAYEF---IVGLPIRPTPILWRTLLSACGSHGNVELG 410
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
+ + ++ E + YI + L AG E+
Sbjct: 411 KRVIEQIFELD--DSHGGDYIILSNLCARAGRWED 443
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 10/284 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ S ++L ++LH L K L + + L+ +Y N + AR +FDK +
Sbjct: 127 LLKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACNEMDCARRVFDKIWEPC 186
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V +N++I YA R N+A SLF+ L LKP + T + +C+ L +++H
Sbjct: 187 VVTYNAMITGYARGSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHE 246
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
+G R +AL+ Y+K +D+A+ VF+ ++ D ++MI +A G K
Sbjct: 247 YVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGHGLK 306
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV--- 245
++ LF M + G PDE T +GL+ L V +G F D Y + +
Sbjct: 307 AVSLFKEMRKAGTEPDEITFLGLLYACSHTGL--VEEGFEYF--YGMRDKYGVIPGIKHY 362
Query: 246 --LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
+V + R + AY L P + W L++ G+
Sbjct: 363 GCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGN 406
>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g24000, mitochondrial; Flags: Precursor
gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
Length = 633
Score = 261 bits (667), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 244/451 (54%), Gaps = 1/451 (0%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
+ D Y + + C+ L R VH + S D + + L+ Y+K ++EA
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
KVF+ + D V ++ISG++ +L F+ MLR G +P+E+TL +I
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
G +HGFC+K FDS +V S L+ +Y R M+ A VF++L + V+W+ALI
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
G++++ KAL F+ + G + AS+ A + + + G +H Y+I+ G +L
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ L+DMY+K G + ++F+ +++R+++++NS++ HGF +A +F ++
Sbjct: 296 VAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+ P+E +F ++L AC H GL+++G + M ++ GI + HY+ +V LLG AG+L
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDL 414
Query: 460 EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
A FI +P A+ ALL+ C ++ N++L A +FE DP V+L N Y
Sbjct: 415 NRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIY 474
Query: 520 AEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A GRW+D ++R + ++G++KE SWV
Sbjct: 475 ASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 188/413 (45%), Gaps = 4/413 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA + ++ D L+ +YA L AR +F+K PQR W ++I Y+ R
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
DA F +LR P+ FT + + +A + +HG + G + SA
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y++ L+D+A VFD + + V N++I+G A +K+L+LF MLR G P
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
++ L L G+ +H + +KS + + L+ MYA+ ++ A +F+
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
L D+V+W++L+T Y+Q G +A+++F ++ G + + + SVL A + S +
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLG 383
G + + + G +VD+ + G L ++ E M E + +++
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGGLVNDGREIFTRMTE 435
+H T + E L+PD+ +L GG ND + +M E
Sbjct: 442 MHKNTELGAYAAEHVFE--LDPDDPGPHVILYNIYASGGRWNDAARVRKKMKE 492
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 5/260 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH K + + L+ LY ++ A+++FD R+ WN++I +A
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRS 241
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
A LF+ +LR +P +F+YA + ACS L ++VH I SG + +
Sbjct: 242 GTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGN 301
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
L+ Y+K I +A K+FD ++ D+V NS+++ +A GF +++ F+ M R+G P
Sbjct: 302 TLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRP 361
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSF--DSYDYVSSVLVSMYARCNCMNSAYH 261
+E + + +++ LL G + K +++ YV+ +V + R +N A
Sbjct: 362 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT--VVDLLGRAGDLNRALR 419
Query: 262 VFNSL-FHPDLVTWSALITG 280
+ P W AL+
Sbjct: 420 FIEEMPIEPTAAIWKALLNA 439
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K +HA + K+ F L+ +YA + + AR +FD+ +R V WNS++ A
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
YA +A F+ + R ++P+ ++ + ACS +
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHS 376
>gi|297741128|emb|CBI31859.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 236/427 (55%), Gaps = 10/427 (2%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H A+ G S+AL+ Y+ + A K+FDG+ D DLV N++I G++
Sbjct: 46 IHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGYSQYNK 105
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYD 240
+ + L+LFD M D T+V +I G WE + + +++ +
Sbjct: 106 YKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWE-----FADSMVKYIKENNLEIDV 160
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
Y+ + L+ MY R + +A +F+++ D+++W+++ITGYSQ + A+ F+++
Sbjct: 161 YLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAA 220
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
K D V +ASVL+A A + G +H Y+ +HG + + V ++L+DMY KCG +
Sbjct: 221 KVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDMYCKCGMVEKA 280
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++VF M +++ +++ SVI GL ++GF A + F ++ +G+ P TF +L AC H
Sbjct: 281 LEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTFVGILLACAHA 340
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLVN G E F M +G+ +HY +V LL +GN+++AY FI +P D V
Sbjct: 341 GLVNKGLEYFESMESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKMPIVPDVVVWRI 400
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLS C ++GN LAEI +L E DP V+LSNTYA RWDD MK+R+ + D+ +
Sbjct: 401 LLSACKLHGNVVLAEIATKRLLELDPCDSGNYVLLSNTYAGVDRWDDAMKMRELMEDSDV 460
Query: 541 RKEAGVS 547
+K +G S
Sbjct: 461 QKPSGSS 467
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 116/220 (52%), Gaps = 1/220 (0%)
Query: 222 SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY 281
++ IH LK F+SY +VS+ L+ MYA C + A +F+ + DLV+W+ LI GY
Sbjct: 41 TISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDRDLVSWNTLICGY 100
Query: 282 SQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSV 341
SQ Y + L F + KAD V + ++ A + + + Y+ ++ E+ V
Sbjct: 101 SQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMVKYIKENNLEIDV 160
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+ + L+DMY + G L ++F+ M +R++I++ S+I G A + F++++
Sbjct: 161 YLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDAVKLFQEMMAA 220
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+ PD+ T +++L AC H G ++ G + +G+QA
Sbjct: 221 KVKPDKVTVASVLSACAHLGKLDVGWAVH-HYIRRHGVQA 259
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 128/266 (48%), Gaps = 14/266 (5%)
Query: 29 VAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDA 88
+ + +L D + L+ +Y L +AR LFD P+R V W S+I Y+ A +F+DA
Sbjct: 151 IKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFSDA 210
Query: 89 KSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTA 148
LF+ ++ ++KPD T A + AC+ L VH G+ D ++L+
Sbjct: 211 VKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLIDM 270
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTL 208
Y K ++++A++VF + D D V S+ISG A GF + +L LF MLR G P T
Sbjct: 271 YCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREGVQPTHGTF 330
Query: 209 VGLISGLWEPSLLSVG-------QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
VG++ L++ G + +HG L + Y V V + +R ++ AY
Sbjct: 331 VGILLACAHAGLVNKGLEYFESMESVHG--LVPAMKHYGCV----VDLLSRSGNIDKAYE 384
Query: 262 VFNSL-FHPDLVTWSALITGYSQQGD 286
+ PD+V W L++ G+
Sbjct: 385 FIKKMPIVPDVVVWRILLSACKLHGN 410
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 181/422 (42%), Gaps = 44/422 (10%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
LV+ L+ + + + + +H K F + L+ +YA+ L A+ +FD R
Sbjct: 29 LVVALTTNINASTISSSIHVHALKLGFESYLFVSNALIHMYAMCGQLGFAQKMFDGMLDR 88
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+ WN++I Y+ +++ + LF + +K D T I ACS D +
Sbjct: 89 DLVSWNTLICGYSQYNKYKEVLRLFDAMTAANIKADAVTMVKIILACSHLGDWEFADSMV 148
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
+ L D + L+ Y +L + A K+FD + D++ SMI+G++ +
Sbjct: 149 KYIKENNLEIDVYLGNTLIDMYGRLGNLTAARKLFDNMPKRDVISWTSMITGYSQASQFS 208
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++LF M+ PD+ T+ ++S L VG +H + + + YV + L+
Sbjct: 209 DAVKLFQEMMAAKVKPDKVTVASVLSACAHLGKLDVGWAVHHYIRRHGVQADIYVGNSLI 268
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
MY +C + A VF+ + D V+W+++I+G + G AL F ++ +G
Sbjct: 269 DMYCKCGMVEKALEVFHRMKDKDSVSWTSVISGLAVNGFANSALDLFSQMLREG------ 322
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
V P HG + ++++ A G + G++ FE+M
Sbjct: 323 --------------VQP---------THGTFVGILLACA------HAGLVNKGLEYFESM 353
Query: 368 SERNIIT-----YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC-CHGG 421
+ + Y V+ L G +A+EF + + + PD + LL AC HG
Sbjct: 354 ESVHGLVPAMKHYGCVVDLLSRSGNIDKAYEFIKKM---PIVPDVVVWRILLSACKLHGN 410
Query: 422 LV 423
+V
Sbjct: 411 VV 412
>gi|224138230|ref|XP_002322762.1| predicted protein [Populus trichocarpa]
gi|222867392|gb|EEF04523.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 155/489 (31%), Positives = 251/489 (51%), Gaps = 43/489 (8%)
Query: 92 FKNLLRTQLKPDN----FTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVT 147
F NL+ +L+ N F +C T L L+ +H I + D +S L++
Sbjct: 4 FSNLVLRKLELKNPKLSFLESCTT--------LSHLKIIHAHLIRAHTIFDVFAASCLIS 55
Query: 148 AYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYT 207
+L+D A +VF + +P+L + NS I GF+ DKS + R G PD T
Sbjct: 56 ISINKNLLDYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLT 115
Query: 208 LVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA-------------RCN 254
L+ + L +G HG ++ FDS YV + LV+MY+ R +
Sbjct: 116 YPFLVKACTQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRIS 175
Query: 255 CMN------------------SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK 296
C++ SA +F+ + +LVTWS +I+GY++ + KA+ +
Sbjct: 176 CLDVVSWTSMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFL 235
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
L +G A+ ++ SV+A+ A + G H Y++++ +++++ +ALVDMY++CG
Sbjct: 236 LQSEGVHANETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGS 295
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ I VF+ + R+ +++ ++I G +HG+ +A E+F + + GL P E TF+A+L A
Sbjct: 296 IDKAIWVFDQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSA 355
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
C HGGLV G E+F M +Y I+ + EHY MV LLG AG L EA F+ +P +
Sbjct: 356 CSHGGLVERGLELFESMKRDYRIEPRLEHYGCMVDLLGRAGKLAEAEKFVNEMPMKPNAP 415
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
+ GALL C I+ NS++AE L E P Y V+LSN YA +W++V +R +
Sbjct: 416 IWGALLGACRIHKNSEIAERAGKTLIELKPEHSGYYVLLSNIYARTNKWENVENIRQMMK 475
Query: 537 DNGLRKEAG 545
+ G+ K G
Sbjct: 476 ERGVVKPPG 484
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 129/494 (26%), Positives = 214/494 (43%), Gaps = 86/494 (17%)
Query: 2 FFNLHFLVLELS-------KSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVL 54
F NL LEL +S +LS K +HA + +A + D F A+ L+ + N+L
Sbjct: 4 FSNLVLRKLELKNPKLSFLESCTTLSHLKIIHAHLIRAHTIFDVFAASCLISISINKNLL 63
Query: 55 PSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
A +F + ++F++NS IR ++ + + + + R L PDN TY + +AC
Sbjct: 64 DYAAQVFYQIQNPNLFIYNSFIRGFSGSKDPDKSFHFYVQSKRNGLVPDNLTYPFLVKAC 123
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS-------------KLSLID----- 156
++ L HG I G D ++LVT YS ++S +D
Sbjct: 124 TQKGSLDMGIQAHGQIIRHGFDSDVYVQNSLVTMYSTLGDIKSASYVFRRISCLDVVSWT 183
Query: 157 -------------EAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A K+FD + + +LV + MISG+A F+DK+++L+ + G
Sbjct: 184 SMVAGYIKSGDVTSARKLFDKMPEKNLVTWSVMISGYAKNSFFDKAIELYFLLQSEGVHA 243
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
+E +V +I+ L +G+ H + L++ + + LV MYARC ++ A VF
Sbjct: 244 NETVMVSVIASCAHLGALELGERAHDYILRNKMTVNLILGTALVDMYARCGSIDKAIWVF 303
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ L D ++W+ LI G++ G KAL YF ++ G + +VL+A +
Sbjct: 304 DQLPGRDALSWTTLIAGFAMHGYAEKALEYFSRMEKAGLTPREITFTAVLSACS------ 357
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS-----ERNIITYNSV 378
HG +++ G EL FE+M E + Y +
Sbjct: 358 -----HGGLVERGLEL------------------------FESMKRDYRIEPRLEHYGCM 388
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ LG G +A +F + E + P+ + ALL AC ++ EI R +
Sbjct: 389 VDLLGRAGKLAEAEKF---VNEMPMKPNAPIWGALLGAC----RIHKNSEIAERAGKTL- 440
Query: 439 IQAKTEHYIYMVKL 452
I+ K EH Y V L
Sbjct: 441 IELKPEHSGYYVLL 454
>gi|125556039|gb|EAZ01645.1| hypothetical protein OsI_23682 [Oryza sativa Indica Group]
Length = 615
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 264/533 (49%), Gaps = 7/533 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LH A+A LL D + A L+ Y L LP A FD P+R V +SI+ A+ A
Sbjct: 60 LHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 119
Query: 84 RFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A + +++L + P+ + +AC+ D +HG +V G G D +
Sbjct: 120 MPRRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRGFGDDGV 179
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
S+LV Y ++ +A KVF+ + PD + S+IS F +++++++ F ML +
Sbjct: 180 VLSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMN 239
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD T +++ L S G+ H + V S + MYA+C M A
Sbjct: 240 GVRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEA 299
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + + V+ AL+ GY Q G+Y K + FR+ M + D + +VL A A
Sbjct: 300 RKVFDRMQVRNEVSRCALLGGYCQNGEYEKVIALFRE--MDKEDGDWYSLGTVLRACAGL 357
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++V PG IH ++ V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 358 SSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMI 417
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A F ++ +G PD +F +L AC H G+V GR F M ++YGI
Sbjct: 418 GGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGI 477
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV L LEEA I P D ++ +L + N D+AE V+
Sbjct: 478 APGIEHYNCMVDLFSRVELLEEAEDLINKSPFRNDSSLWADILGASATHSNPDVAERVSK 537
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
++ E +P+ ++L N Y GRW+D +++R + ++KE G+SWV +
Sbjct: 538 KMMELEPQYHLSYILLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWVDAN 590
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S+ ++ HA V L + + + +YA ++ AR +FD+ R+ +++ Y
Sbjct: 262 SQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQVRNEVSRCALLGGY 321
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +LF+ + + D ++ + RAC+ S + + +H + RD
Sbjct: 322 CQNGEYEKVIALFREM--DKEDGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMAGWRDV 379
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ SALV Y+K +D A VF+ + + + N+MI GFA G ++++ LF+ M+R
Sbjct: 380 VVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNGHGERAINLFNRMVRE 439
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD + +G++ ++ G+ + C + +V +++R +
Sbjct: 440 GPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGIAPGIEHYNCMVDLFSRVELLEE 499
Query: 259 AYHVFN-SLFHPDLVTWSALI 278
A + N S F D W+ ++
Sbjct: 500 AEDLINKSPFRNDSSLWADIL 520
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + + RD + LV LYA + A +F+ + R+
Sbjct: 350 VLRACAGLSSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRN 409
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVH 127
WN++I +A A +LF ++R +PD ++ + ACS + G + +
Sbjct: 410 TITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFN 469
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
G+ + +V +S++ L++EA
Sbjct: 470 SMCKDYGIAPGIEHYNCMVDLFSRVELLEEA 500
>gi|15234044|ref|NP_193619.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098703|sp|O49399.2|PP321_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18840
gi|5738365|emb|CAA16741.2| putative protein [Arabidopsis thaliana]
gi|7268678|emb|CAB78886.1| putative protein [Arabidopsis thaliana]
gi|332658697|gb|AEE84097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 545
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 160/531 (30%), Positives = 268/531 (50%), Gaps = 43/531 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN---NVLPSARILFDKTP 65
+L ++ +SL+ ++ HA + K L D F A+KLV A N + A + ++
Sbjct: 42 ILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+ F NS+IRAYA + A ++F+ +L + PD +++ + +AC+ R
Sbjct: 102 SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQ 161
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+HG I SGL D + LV Y + + A KV D + D V NS++S + G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D++ LFD M + + +S+++
Sbjct: 222 VDEARALFDEME-----------------------------------ERNVESWNF---- 242
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LNMQGKKA 304
++S YA + A VF+S+ D+V+W+A++T Y+ G Y + L F K L+ +K
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + SVL+A A ++ G +H Y+ +HG E+ +++ALVDMYSKCG + ++VF
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVF 362
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
S+R++ T+NS+I L +HG A E F +++ +G P+ TF +L AC H G+++
Sbjct: 363 RATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLD 422
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
R++F M+ Y ++ EHY MV LLG G +EEA + +P + +LL
Sbjct: 423 QARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGA 482
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
C +G + AE +A++L E + R + +SN YA DGRW+ V+ R ++
Sbjct: 483 CKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
>gi|414888053|tpg|DAA64067.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 754
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 169/558 (30%), Positives = 279/558 (50%), Gaps = 23/558 (4%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+ L L+ ++LHALV++A + D F LV YA L +AR +F++ P R
Sbjct: 162 VTLSLAAGRGEGRLVRQLHALVSRAGIAADVFVGNALVTAYARGASLDAARKVFEEMPAR 221
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRT----QLKPDNFTYACITRACSENSDLPGL 123
+ WN+++ LA + + LR ++PD + + AC L
Sbjct: 222 DLVSWNALV--CGLAQDGECPAEVIRVFLRMLKHGGVRPDRISVCSVISACGGEGKLELG 279
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
R +HG A+ G+ ++ LV Y K A ++F+ + + D+V +++S
Sbjct: 280 RQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARRLFEFMGERDVVSWTTVMS----- 334
Query: 184 GFWDK--SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
D+ ++ LF+ M+R G P+E T V ++S + GQ +H C+K+
Sbjct: 335 --MDREDAVSLFNGMMRDGVAPNEVTFVAILSAMPGHCPAREGQMVHAVCIKTGLSDKPA 392
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
++ ++MYA+ M+ A +F + HP+++ W+ALI+GY+Q AL F + ++
Sbjct: 393 AANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISGYAQNEMCQDALEAFLSM-VKI 451
Query: 302 KKADPVLIASVLAA--AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
K AS+L+A A ++ ++ G + H ++ G S VS AL+D+Y+K G L
Sbjct: 452 TKPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLGASEYVSGALIDLYAKRGSLEE 511
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+ F R++I + ++I HG F D+ G+ PD ++L AC +
Sbjct: 512 SWKAFGETVHRSLIAWTAIISANSKHGNYDGVVSLFNDMARSGVTPDGVVLLSVLTACRY 571
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
G + GREIF M ++G + EHY +V +LG AG LEEA + +P P+VS
Sbjct: 572 SGFASLGREIFESMATKHGAELWPEHYACVVDMLGRAGRLEEAEELMLQMPS--GPSVSA 629
Query: 480 --ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
+LL C I+GN+D+ E VA L E +P + V+LSN YAE G W V ++R +
Sbjct: 630 MQSLLGACRIHGNTDVGERVAGVLLETEPTESGAYVLLSNIYAEKGDWGAVARVRRKMRG 689
Query: 538 NGLRKEAGVSWV-SGSSN 554
G++KE G SWV +G +N
Sbjct: 690 MGVKKEVGFSWVDAGGAN 707
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 201/443 (45%), Gaps = 13/443 (2%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LHAL + L L YA N +A +F P R +N+I+ A
Sbjct: 80 LHALAVISGLAAFAPVTNSLAARYAKGNSFAAAARVFAAAPSRDTSSYNTILSATP---D 136
Query: 85 FNDAKSLFKNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+DA + +LR ++PD T+ + + +R +H +G+ D +
Sbjct: 137 PDDALAFAARMLRAGDVRPDAITFTVTLSLAAGRGEGRLVRQLHALVSRAGIAADVFVGN 196
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS-LQLFDWMLRLGKT 202
ALVTAY++ + +D A KVF+ + DLV N+++ G A G +++F ML+ G
Sbjct: 197 ALVTAYARGASLDAARKVFEEMPARDLVSWNALVCGLAQDGECPAEVIRVFLRMLKHGGV 256
Query: 203 -PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD ++ +IS L +G+ IHGF +K + + +++VLV+MY +C A
Sbjct: 257 RPDRISVCSVISACGGEGKLELGRQIHGFAVKLGIEGHVSIANVLVAMYYKCGTPGCARR 316
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
+F + D+V+W+ +++ D A+ F + G + V ++L+A
Sbjct: 317 LFEFMGERDVVSWTTVMS-----MDREDAVSLFNGMMRDGVAPNEVTFVAILSAMPGHCP 371
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G ++H I+ G +++ + MY+K + +F M +I +N++I G
Sbjct: 372 AREGQMVHAVCIKTGLSDKPAAANSFITMYAKLRRMDDAKMIFGLMPHPEVIAWNALISG 431
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG-REIFTRMTEEYGIQ 440
+ A E F ++ K P E+TF+++L A V+ +++ T + G+
Sbjct: 432 YAQNEMCQDALEAFLSMV-KITKPSETTFASILSAVTAVETVSMAYGQMYHCQTLKLGLG 490
Query: 441 AKTEHYIYMVKLLGLAGNLEEAY 463
A ++ L G+LEE++
Sbjct: 491 ASEYVSGALIDLYAKRGSLEESW 513
>gi|219363695|ref|NP_001136685.1| uncharacterized protein LOC100216817 [Zea mays]
gi|194696634|gb|ACF82401.1| unknown [Zea mays]
Length = 615
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 278/544 (51%), Gaps = 28/544 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT--------PQRSVF 70
L +ELHA + K L RDP A+KL+ YAL +P+ R +F P +
Sbjct: 39 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 98
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
L +++RAYAL + A ++F ++ Q FTY+ + +A + P +R H
Sbjct: 99 LTKTLLRAYALNSLPHAALAVFLDVPLRQR--GTFTYSFLIKALAAAGLTP-VRGAHAHV 155
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ G D+ +AL+ AYSK + +A KVFD ++ D+V N+ ++ G D +
Sbjct: 156 VKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAAR 215
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSL---LSVGQGIHGFCLKSSFDSYDYVS-SVL 246
+FD M P++ T+ W L G+ F L + VS S +
Sbjct: 216 SMFDEM------PEKDTVS------WNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTV 263
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
VS Y + M A +F+ + +LVTW+ +++ +Q+G +A F ++ + D
Sbjct: 264 VSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDV 323
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ + S+LAA A+S ++ G IH +V Q S +V +AL+DM+ KCG + +F+T
Sbjct: 324 IAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDT 383
Query: 367 -MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ E++++++N +I G +HG +A E F + ++G +PD T +L AC H GLV +
Sbjct: 384 EIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEE 443
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR F M +YGI+ + EHY MV LLG G ++EA I +P + + G+LLS C
Sbjct: 444 GRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSAC 503
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++ N + AE+ ++L P +LSN YAE G+W D+ K R + G +K AG
Sbjct: 504 RLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAG 563
Query: 546 VSWV 549
SW+
Sbjct: 564 SSWI 567
>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 980
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 159/538 (29%), Positives = 263/538 (48%), Gaps = 31/538 (5%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN- 94
RD F ++ Y N L AR LFD P++ V WNS++ YA ++A+ +F N
Sbjct: 109 RDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM 168
Query: 95 ----------LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI-VSGLG------- 136
LL + AC+ + DL + GG + LG
Sbjct: 169 PEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFD 228
Query: 137 ----RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
RD+I+ + +++ Y++ + +A ++FD D+ +M+SG+ G D++
Sbjct: 229 KMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTF 288
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
FD M +E + +I+G + + + + + + S++ +++ Y +
Sbjct: 289 FDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWN----TMITGYGQ 340
Query: 253 CNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASV 312
+ A F+ + D V+W+A+I GY+Q G Y +AL F ++ G+ +
Sbjct: 341 IGDIAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCA 400
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNI 372
L+ A A + G IHG ++ G+ V +AL+ MY KCG + FE + E+++
Sbjct: 401 LSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDV 460
Query: 373 ITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
+++N+++ G HGF QA F + G+ PDE T +L AC H GL++ G E F
Sbjct: 461 VSWNTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYS 520
Query: 433 MTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
MT++YG+ ++HY M+ LLG AG LEEA I ++P A GALL I+GN++
Sbjct: 521 MTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTE 580
Query: 493 LAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L E A +F+ +P+ V+LSN YA GRW D K+R + D G++K G SWV
Sbjct: 581 LGEKAAEMVFKMEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVE 638
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 141/286 (49%), Gaps = 8/286 (2%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
+RD ++ YA L AR LFD++P R VF W +++ Y ++AK+ F
Sbjct: 232 VRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDE 291
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
+ + + +Y + + + R + S R+ + + ++T Y ++
Sbjct: 292 M----PEKNEVSYNAMIAGYVQTKKMDIAREL----FESMPCRNISSWNTMITGYGQIGD 343
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
I +A K FD + D V ++I+G+A G ++++L +F + + G++ + T +S
Sbjct: 344 IAQARKFFDMMPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALST 403
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
+ + L +G+ IHG +K + + +V + L++MY +C ++ A F + D+V+W
Sbjct: 404 CADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSW 463
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+ ++ GY++ G +AL F + G K D + + VL+A + +
Sbjct: 464 NTMLAGYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTG 509
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 150/347 (43%), Gaps = 54/347 (15%)
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM- 196
D + + ++ + + D A+ VF+ + V N+MISG+ ++ + LFD M
Sbjct: 48 DILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMP 107
Query: 197 -----------------LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC--LKSSFD 237
RLG + L+ + SLLS G +G+ + FD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLS-GYAQNGYVDEAREVFD 166
Query: 238 SYDYVSSV----LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ +S+ L++ Y + A +F S DL++W+ L+ G+ ++ G A +
Sbjct: 167 NMPEKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWL 226
Query: 294 FRKLNMQGKKADPVLIASV-----LAAAAKSANVWP-------GAVIHGYVIQHGF---- 337
F K+ ++ + +I+ L+ A + + P A++ GYV Q+G
Sbjct: 227 FDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVFTWTAMVSGYV-QNGMLDEA 285
Query: 338 --------ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTY 389
E + + +A++ Y + + + ++FE+M RNI ++N++I G G G
Sbjct: 286 KTFFDEMPEKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIA 345
Query: 390 QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
QA +FF + ++ D +++A++ G + +F + ++
Sbjct: 346 QARKFFDMMPQR----DCVSWAAIIAGYAQSGHYEEALNMFVEIKQD 388
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 55/136 (40%), Gaps = 38/136 (27%)
Query: 413 LLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
L + GL++ G E F M EEY + ++HY M+ LLG LEE
Sbjct: 770 FLLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEE----------- 818
Query: 473 VDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLR 532
GALL I+GN++L E A F+ P+ + K+R
Sbjct: 819 ------GALLGASRIHGNTELGEKAAQMFFKMGPQNSG-----------------ISKMR 855
Query: 533 DDIVDNGLRKEAGVSW 548
D G++K G SW
Sbjct: 856 ----DVGVQKVPGYSW 867
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 120/299 (40%), Gaps = 74/299 (24%)
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
V DPD++ N IS G D +L +F+ M R
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTMPR-------------------------- 77
Query: 225 QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
+SS SY+ ++S Y R + N A ++F+ + DL +W+ ++TGY +
Sbjct: 78 --------RSSV-SYN----AMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRN 124
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV-----------------WPG-- 325
G A R+L + D V S+L+ A++ V W G
Sbjct: 125 CRLGDA----RRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNMPEKNSISWNGLL 180
Query: 326 -AVIHGYVIQHG---FE----LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A +H I+ FE ++ + L+ + + LG +F+ M R+ I++N+
Sbjct: 181 AAYVHNGRIEEACLLFESKSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNT 240
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
+I G G QA R + ++ D T++A++ G++++ + F M E+
Sbjct: 241 MISGYAQGGGLSQA----RRLFDESPTRDVFTWTAMVSGYVQNGMLDEAKTFFDEMPEK 295
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 42/98 (42%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K++H K F L+ +Y + A F+ ++ V WN+++
Sbjct: 409 ALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLA 468
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
YA A ++F+++ +KPD T + ACS
Sbjct: 469 GYARHGFGRQALTVFESMKTAGVKPDEITMVGVLSACS 506
>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 635
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 154/494 (31%), Positives = 251/494 (50%), Gaps = 15/494 (3%)
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLL------RTQLKPDNFTYAC--------ITRACS 115
F N +IR L R N + SL +N+ + ++ P ++ I + C+
Sbjct: 14 FTVNFLIRCKVLPRRSNTS-SLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCA 72
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
N + + HG I L D + L+ AYSK ++ A +VFDG+ + LV N+
Sbjct: 73 RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 132
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
MI + ++L +F M G E+T+ ++S + +H +K+
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
D YV + L+ +YA+C + A VF S+ VTWS+++ GY Q +Y +AL +R
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + + ++SV+ A + A + G +H + + GF +V V+S+ VDMY+KCG
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 312
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
L +F + E+N+ +N++I G H + F + + G++P+E TFS+LL
Sbjct: 313 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 372
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
C H GLV +GR F M YG+ HY MV +LG AG L EAY I S+P
Sbjct: 373 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 432
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
++ G+LL+ C +Y N +LAE+ A +LFE +P V+LSN YA + +W+++ K R +
Sbjct: 433 SIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 492
Query: 536 VDNGLRKEAGVSWV 549
D ++K G SW+
Sbjct: 493 RDCDVKKVRGKSWI 506
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 173/365 (47%), Gaps = 1/365 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
NL +L+L + ++ K H + + L D L+ Y+ + AR +FD
Sbjct: 62 NLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDG 121
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+RS+ WN++I Y ++A +F + K FT + + AC N D
Sbjct: 122 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 181
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +H ++ + + + +AL+ Y+K +I +A++VF+ + D V +SM++G+
Sbjct: 182 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 241
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
++++L L+ R+ +++TL +I + L G+ +H KS F S +V+
Sbjct: 242 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 301
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
S V MYA+C + +Y +F+ + +L W+ +I+G+++ + + F K+ G
Sbjct: 302 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 361
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V +S+L+ + V G + +G +V+ S +VD+ + G L +
Sbjct: 362 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 421
Query: 363 VFETM 367
+ +++
Sbjct: 422 LIKSI 426
>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1212
Score = 261 bits (667), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 158/530 (29%), Positives = 279/530 (52%), Gaps = 9/530 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HA++ K++ D + + L+ +YA + A +F + WN+++
Sbjct: 273 IHAVILKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDM 332
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
++DA + F+++ + KPD + + A +++L VH AI G+ + ++
Sbjct: 333 YSDAINHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNS 392
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ Y K + F+ + + DL+ ++I+G+A +L L ++L K
Sbjct: 393 LIDMYGKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLR-KVQLEKMDV 451
Query: 205 EYTLVGLI----SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
+ ++G I SGL L+ + IHG+ LK + + +V++Y ++ A
Sbjct: 452 DPMMIGSILLACSGLKSEKLI---KEIHGYVLKGGLADI-LIQNAIVNVYGELALVDYAR 507
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
HVF S+ D+V+W+++IT G +AL F L + D + + SVL AAA +
Sbjct: 508 HVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALS 567
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G IHG++I+ GF L +++++LVDMY++CG + +F + +R++I + S+I
Sbjct: 568 SLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMIN 627
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G+HG A + F + ++ + PD TF ALL AC H GLV +G++ F M EY ++
Sbjct: 628 ANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLE 687
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY +V LL + +LEEAY F+ ++P V ALL C I+ N+DL E+ A +
Sbjct: 688 PWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKK 747
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
L + + V++SNT+A DGRW+DV ++R + N L+K+ G SW+
Sbjct: 748 LLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIE 797
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 214/411 (52%), Gaps = 3/411 (0%)
Query: 10 LELSKSHQSLSRTKELHALVAKA-SLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
LEL SH++L + ++LHA K + L F TK V +Y A +FDK +R+
Sbjct: 53 LELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKMSERT 112
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+F WN++I A A R+ +A L+K + + D FT+ C+ +AC + +HG
Sbjct: 113 IFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHG 172
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG--VSDPDLVLCNSMISGFAHCGFW 186
A+ G G +AL+ Y+K + A +FD + D V NS+IS G
Sbjct: 173 VAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGES 232
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
++L LF M +G + YT V + P+ + +G+GIH LKS+ + YVS+ L
Sbjct: 233 LEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNAL 292
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
++MYA C M A VF S+ D V+W+ L++G Q Y A+ +F+ + G+K D
Sbjct: 293 IAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQ 352
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + +++AA+ +SAN+ G +H Y I+HG + ++ + ++L+DMY KC + FE
Sbjct: 353 VSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEY 412
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
M E+++I++ ++I G + A R + + ++ D ++L AC
Sbjct: 413 MPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLAC 463
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 200/408 (49%), Gaps = 3/408 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK--TPQRSVFLWNSIIRAYAL 81
E+H + K F L+ +YA L AR+LFD + WNSII A+
Sbjct: 169 EIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHVG 228
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+A SLF+ + ++ + +T+ +AC + + R +H + S D
Sbjct: 229 EGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYV 288
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
S+AL+ Y+ +++A +VF + D V N+++SG + ++ F M G+
Sbjct: 289 SNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQ 348
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD+ +++ +I+ + L G +H + +K DS ++ + L+ MY +C C+
Sbjct: 349 KPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGS 408
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F + DL++W+ +I GY+Q + AL RK+ ++ DP++I S+L A + +
Sbjct: 409 AFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKS 468
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
IHGYV++ G +++ +A+V++Y + + VFE+++ ++I+++ S+I
Sbjct: 469 EKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITC 527
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G +A E F +IE + PD T ++L A + G+EI
Sbjct: 528 CVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEI 575
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 11/126 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + SL + KE+H + + + A LV +YA + +AR +F+ QR
Sbjct: 559 VLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRD 618
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ LW S+I A + DA LF + + PD+ T+ + ACS H
Sbjct: 619 LILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACS-----------HS 667
Query: 129 GAIVSG 134
G +V G
Sbjct: 668 GLVVEG 673
>gi|449455172|ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449474033|ref|XP_004154055.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449510921|ref|XP_004163811.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 649
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 148/462 (32%), Positives = 248/462 (53%), Gaps = 6/462 (1%)
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
LL + P T + + + + L VH + G +D ++ L+ +S+L
Sbjct: 60 LLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDT 119
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
+D A KVFD + + N++ A G + L+L+ M +G + D +T L+
Sbjct: 120 VDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKA 179
Query: 215 LWEP----SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
S L G+ IH L+ + ++ +V + L+ MYAR C++ A VF+ + +
Sbjct: 180 CVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKN 239
Query: 271 LVTWSALITGYSQQGDYGKALYYFRK--LNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
+V+WSA+I Y++ G +AL FR+ LN + V + SVL A A A + G +I
Sbjct: 240 VVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLI 299
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFT 388
H Y+++ G + + V SAL+ MY++CG L G +F+ M +++++ +NS+I GLHG+
Sbjct: 300 HAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYG 359
Query: 389 YQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY 448
+A + F ++I+ G +P +F ++L AC H GLV +G+++F M +E+GIQ EHY
Sbjct: 360 RKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYAC 419
Query: 449 MVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRK 508
MV LLG A L+EA I L P V G+LL C I+ + +LAE + +LF+ +P
Sbjct: 420 MVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFKLEPTN 479
Query: 509 GAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V+L++ YAE WD+V +++ + L+K G SW+
Sbjct: 480 AGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSWIE 521
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/368 (27%), Positives = 185/368 (50%), Gaps = 8/368 (2%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L ++ + SLS ++H L+ +DPF ATKL+ +++ + + +AR +FDKT +
Sbjct: 74 LLILSAARRN-SLSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRK 132
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL--- 123
R++++WN++ RA ALA R ND L+ + + D FTY + +AC + L
Sbjct: 133 RTIYVWNALFRALALAGRGNDVLELYPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQK 192
Query: 124 -RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +H + G G + L+ Y++ + A VFD + ++V ++MI+ +A
Sbjct: 193 GKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAK 252
Query: 183 CGFWDKSLQLFDWML--RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G ++L+LF M+ P+ T+V ++ + L G+ IH + L+ DS
Sbjct: 253 NGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAALEQGKLIHAYILRRGLDSIL 312
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V S L++MYARC + S +F+ + D+V W++LI+ Y G KA+ F ++
Sbjct: 313 PVISALITMYARCGKLESGQLIFDRMHKKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDH 372
Query: 301 GKKADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G + SVL A + + V G + V +HG + SV + +VD+ + L
Sbjct: 373 GFSPSHISFISVLGACSHTGLVEEGKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDE 432
Query: 360 GIQVFETM 367
++ E +
Sbjct: 433 AAKIIEDL 440
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 125/262 (47%), Gaps = 10/262 (3%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N +I G ++L ++L P + T LI + LS +H +
Sbjct: 42 NHLIQSLCKQGNLKQAL----YLLSHESNPTQQTCELLILSAARRNSLSDALDVHQLLVD 97
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
FD ++++ L++M++ + +++A VF+ + W+AL + G L
Sbjct: 98 GGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRALALAGRGNDVLEL 157
Query: 294 FRKLNMQGKKAD----PVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVD 349
+ ++NM G +D L+ + +A+ + + G IH ++++HG+ V V + L+D
Sbjct: 158 YPRMNMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMD 217
Query: 350 MYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN--PDE 407
MY++ G + VF+ M +N+++++++I +G Y+A E FR+++ + P+
Sbjct: 218 MYARFGCVSYASAVFDEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNS 277
Query: 408 STFSALLCACCHGGLVNDGREI 429
T ++L AC + G+ I
Sbjct: 278 VTMVSVLQACAAFAALEQGKLI 299
>gi|51091970|dbj|BAD35499.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
Length = 665
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 168/533 (31%), Positives = 264/533 (49%), Gaps = 7/533 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LH A+A LL D + A L+ Y L LP A FD P+R V +SI+ A+ A
Sbjct: 110 LHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 169
Query: 84 RFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A + +++L + P+ + +AC+ D +HG +V G G D +
Sbjct: 170 MPRRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRGFGDDGV 229
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
S+LV Y ++ +A KVF+ + PD + S+IS F +++++++ F ML +
Sbjct: 230 VLSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMN 289
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD T +++ L S G+ H + V S + MYA+C M A
Sbjct: 290 GVRPDGCTFGSMMTALGNSKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEA 349
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + + V+ AL+ GY Q G+Y K + FR+ M + D + +VL A A
Sbjct: 350 RKVFDRMQVRNEVSRCALLGGYCQNGEYEKVIALFRE--MDKEDGDWYSLGTVLRACAGL 407
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++V PG IH ++ V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 408 SSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMI 467
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A F ++ +G PD +F +L AC H G+V GR F M ++YGI
Sbjct: 468 GGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGI 527
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV L LEEA I P D ++ +L + N D+AE V+
Sbjct: 528 APGIEHYNCMVDLFSRVELLEEAEDLINKSPFRNDSSLWADILGASATHSNPDVAERVSK 587
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
++ E +P+ ++L N Y GRW+D +++R + ++KE G+SWV +
Sbjct: 588 KMMELEPQYHLSYILLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWVDAN 640
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 118/261 (45%), Gaps = 4/261 (1%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S+ ++ HA V L + + + +YA ++ AR +FD+ R+ +++ Y
Sbjct: 312 SQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQVRNEVSRCALLGGY 371
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +LF+ + + D ++ + RAC+ S + + +H + RD
Sbjct: 372 CQNGEYEKVIALFREM--DKEDGDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMAGWRDV 429
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ SALV Y+K +D A VF+ + + + N+MI GFA G ++++ LF+ M+R
Sbjct: 430 VVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNGHGERAINLFNRMVRE 489
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD + +G++ ++ G+ + C + +V +++R +
Sbjct: 490 GPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGIAPGIEHYNCMVDLFSRVELLEE 549
Query: 259 AYHVFN-SLFHPDLVTWSALI 278
A + N S F D W+ ++
Sbjct: 550 AEDLINKSPFRNDSSLWADIL 570
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + + RD + LV LYA + A +F+ + R+
Sbjct: 400 VLRACAGLSSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRN 459
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVH 127
WN++I +A A +LF ++R +PD ++ + ACS + G + +
Sbjct: 460 TITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFN 519
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
G+ + +V +S++ L++EA
Sbjct: 520 SMCKDYGIAPGIEHYNCMVDLFSRVELLEEA 550
>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
Length = 1108
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 156/548 (28%), Positives = 272/548 (49%), Gaps = 15/548 (2%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFY-----ATKLVRLYALNNVLPSARILFDK 63
+L + ++L +++H+L+ L R Y AT LV +Y + A ++F +
Sbjct: 443 ILNACSNSEALDFGRKIHSLI----LTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKE 498
Query: 64 TP--QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
P RS+ WN ++ AYA R +A +L+ + PD ++ + +C + +
Sbjct: 499 MPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQ 558
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
LR I+ R + +AL++ + + +++A VFD + D+V +M+S A
Sbjct: 559 VLRMC----ILESGYRSACLETALISMHGRCRELEQARSVFDEMDHGDVVSWTAMVSATA 614
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
+ + LF M G PD++TL + + + L +G+ IH + ++
Sbjct: 615 ENRDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIGLEADIA 674
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V + L++MY+ C A F ++ DLV+W+ + Y+Q G +A+ FR + ++G
Sbjct: 675 VENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEG 734
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
K D + ++ L + SA V G + HG + G + V V++ LV +Y+KCG L I
Sbjct: 735 VKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKCGKLDEAI 794
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
+F + ++ N++I L HGF+ +A + F + ++G+ PD +T +++ AC H G
Sbjct: 795 SLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPDVATLVSIISACGHAG 854
Query: 422 LVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGAL 481
+V +G F M E +GI EHY V LLG AG LE A I +P + V +L
Sbjct: 855 MVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQIIRKMPFEDNTLVWTSL 914
Query: 482 LSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
L C + G+++L E A ++ E DP A V+LSN Y G+W D R ++D ++
Sbjct: 915 LGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWKDADVDRKKLLDQNVK 974
Query: 542 KEAGVSWV 549
G+SW+
Sbjct: 975 NAPGMSWL 982
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 229/465 (49%), Gaps = 14/465 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L++ K H L+A A L + F L+ +Y L A +F K +R+V W ++I A
Sbjct: 41 LAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSLEEAHAIFSKMEERNVVSWTALISA 100
Query: 79 YALAHRFNDAKSLFKN-LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
A + F A +LF+ LL + P+++T + AC+ + DL R +H GL R
Sbjct: 101 NAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLER 160
Query: 138 DSITSS----ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH-CGFWDKSLQL 192
+S T++ A++ Y+K ++AI VF + + D+V +M +A F+ +L++
Sbjct: 161 ESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKDVVSWTAMAGAYAQERRFYPDALRI 220
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYAR 252
F ML P+ ++ I+ L + L G +H ++ + L++MY +
Sbjct: 221 FREMLLQPLAPN---VITFITALGACTSLRDGTWLHSLLHEAGLGFDPLAGNALINMYGK 277
Query: 253 CNCMNSAYHVFNSLF---HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
C AY VF ++ DLV+W+A+I+ + G +G A+ FR+L ++G + + V +
Sbjct: 278 CGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAGRHGDAMAIFRRLRLEGMRPNSVTL 337
Query: 310 ASVLAA-AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
++L A AA + HG + + G+ V+V +A++ MY+KCG+ VF +
Sbjct: 338 ITILNALAASGVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIR 397
Query: 369 ER-NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+ ++I++N+++ + F ++ G++P++ +F A+L AC + ++ GR
Sbjct: 398 WKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGR 457
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+I + + ++ +V + G G++ EA +P P
Sbjct: 458 KIHSLILTRRRDYVESSVATMLVSMYGKCGSIAEAELVFKEMPLP 502
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 161/339 (47%), Gaps = 18/339 (5%)
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+R D Y + ++C +++DL + H +GL + + L+ Y + +
Sbjct: 17 VRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSL 76
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM-LRLGKTPDEYTLVGLISG 214
+EA +F + + ++V ++IS A G + ++ LF M L P+ YTLV +++
Sbjct: 77 EEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136
Query: 215 LWEPSLLSVGQGIHGFC----LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
L++G+ IH L+ + V + +++MYA+C A VF ++ D
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD 196
Query: 271 LVTWSALITGYSQQGD-YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
+V+W+A+ Y+Q+ Y AL FR++ +Q + + + L A ++ G +H
Sbjct: 197 VVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGAC---TSLRDGTWLH 253
Query: 330 GYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER---NIITYNSVI---LGLG 383
+ + G + +AL++MY KCG VF+ M+ R +++++N++I + G
Sbjct: 254 SLLHEAGLGFDPLAGNALINMYGKCGDWEGAYGVFKAMASRQELDLVSWNAMISASVEAG 313
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
HG A FR + +G+ P+ T +L A G+
Sbjct: 314 RHG---DAMAIFRRLRLEGMRPNSVTLITILNALAASGV 349
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 135/273 (49%), Gaps = 10/273 (3%)
Query: 197 LRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCM 256
+R+ + D L+ + + L+ G+ H + + + ++ + L++MY RC +
Sbjct: 17 VRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHLFLGNCLINMYVRCGSL 76
Query: 257 NSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA-DPVLIASVLAA 315
A+ +F+ + ++V+W+ALI+ +Q G + +A FR + ++ A + + ++L A
Sbjct: 77 EEAHAIFSKMEERNVVSWTALISANAQSGAFARAFALFRTMLLESSAAPNSYTLVAMLNA 136
Query: 316 AAKSANVWPGAVIHGYVIQHGFE----LSVMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
A S ++ G IH + + G E + +V +A+++MY+KCG I VF T+ E++
Sbjct: 137 CANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKCGSPEDAIAVFLTIPEKD 196
Query: 372 IITYNSVILGLGLHGFTY-QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
++++ ++ Y A FR+++ + L P+ TF L AC + DG +
Sbjct: 197 VVSWTAMAGAYAQERRFYPDALRIFREMLLQPLAPNVITFITALGACTS---LRDGTWLH 253
Query: 431 TRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
+ + E G+ ++ + G G+ E AY
Sbjct: 254 S-LLHEAGLGFDPLAGNALINMYGKCGDWEGAY 285
>gi|255572826|ref|XP_002527345.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533264|gb|EEF35017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 279/554 (50%), Gaps = 12/554 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
L+ E +K + S+S + +HA + K +D T LV +YA + +AR +FD +R
Sbjct: 80 LLQECTKKN-SVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAMGNARKIFDSLHRR 138
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVH 127
+V W +++ Y + N A +F+++L + P N+T ACS + + + +H
Sbjct: 139 NVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNACSAINSIKLGKQLH 198
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
I L D +AL + YSKL +D +I VF + + +++ ++IS G
Sbjct: 199 AFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWTAVISACGENGKAA 258
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
L+ F+ ML P+E+TL ++S L +G+ +H +K + +++ ++
Sbjct: 259 MGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKLGYQYNLRITNSIM 318
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-----------ALYYFRK 296
+Y +C M+ A +F+ + +LVTW+A+I+G++Q D K AL F +
Sbjct: 319 YLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSAQRSGIEALSIFLE 378
Query: 297 LNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGY 356
LN GKK D ++SVL ++ + + G +H I+ G+ V+V +ALV+MYSKCG
Sbjct: 379 LNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQTIKSGYLSDVVVGTALVNMYSKCGS 438
Query: 357 LGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+G + F MS R +I++ ++I GL HG + QA + F D+ G+ P++ TF +L A
Sbjct: 439 IGKASKAFVEMSTRTLISWTTMITGLAQHGHSEQALQLFEDMRLAGVRPNQITFVGVLAA 498
Query: 417 CCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
CCH G+V++ F M +EY I+ +HY ++ + L+EA+ I +
Sbjct: 499 CCHSGMVDEALGYFEMMQKEYRIKPVMDHYGCLIAMFVKLRRLDEAFDIINKMDFEPSEF 558
Query: 477 VSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIV 536
+ L++ C G +L A QL + + V L N Y RW DV ++R +
Sbjct: 559 IWSILIAGCRNLGKQELGFYAAEQLLKLKLKDTETYVTLLNMYISAKRWQDVSRVRKLMK 618
Query: 537 DNGLRKEAGVSWVS 550
+ L K SW++
Sbjct: 619 EEKLGKFNDWSWIT 632
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 173/348 (49%), Gaps = 11/348 (3%)
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
++ + K + Y + + C++ + + + +H I +G +D ++LV Y+K +
Sbjct: 66 IKEEKKIEPSYYLPLLQECTKKNSVSEAQVIHAHIIKTGTHKDLAVMTSLVNVYAKCGAM 125
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A K+FD + ++V ++++G+ + ++ +F ML G P YTL ++
Sbjct: 126 GNARKIFDSLHRRNVVAWTALMTGYVQNSQPNIAIDVFQDMLESGTLPSNYTLGIALNAC 185
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+ + +G+ +H F +K D + + L S+Y++ ++S+ +VF S+ ++++W+
Sbjct: 186 SAINSIKLGKQLHAFVIKYKLDYDPSIGNALCSLYSKLGSLDSSINVFQSIGEKNVISWT 245
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A+I+ + G L +F ++ ++ K + + +VL+ + + G ++H I+
Sbjct: 246 AVISACGENGKAAMGLRFFNEMLLEDIKPNEFTLTTVLSLCCVTLALVLGRLVHSLSIKL 305
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG------LGLHGFTY 389
G++ ++ ++++++ +Y KCG++ +F M N++T+N++I G L F+
Sbjct: 306 GYQYNLRITNSIMYLYLKCGHMDEAQILFHKMGSTNLVTWNAMISGHAQAMDLAKDDFSA 365
Query: 390 Q-----AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTR 432
Q A F ++ G PD T S++L C + G ++ +
Sbjct: 366 QRSGIEALSIFLELNRTGKKPDLFTLSSVLTVCSRLSALGQGEQLHAQ 413
>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
Length = 514
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 143/386 (37%), Positives = 209/386 (54%), Gaps = 31/386 (8%)
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
M+ G P+++TL ++ + L G+ H + +K F+S V + LV MYARC
Sbjct: 1 MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL--YY-------------------- 293
+ A HVF+ + TW+A+ITG++Q D KAL +Y
Sbjct: 61 LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120
Query: 294 ---------FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
F ++ G K+D ++ SVL+A A A + G H YV+Q GF L ++V
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
SALVDMY+K G + QVF+ M +RN +++NS+I G HG A F +++ G+
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYS 464
P+E +F +L AC H GLVN+GR F MT+ YGI HY M+ LLG AG L+EA +
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300
Query: 465 FIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGR 524
FI +P D +V GALL C I+GN++LA+ +A L + + V+LSN YA G+
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360
Query: 525 WDDVMKLRDDIVDNGLRKEAGVSWVS 550
WDD K+R + D G+ K+ G SW+
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIE 386
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 133/307 (43%), Gaps = 41/307 (13%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
V++ S SL + K+ H + K D T LV +YA L A +FDK +RS
Sbjct: 16 VVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAGHVFDKMSERS 75
Query: 69 VFLWNSIIRAYALAHRFNDAKSLF-------------------------------KNLLR 97
WN++I +A A LF + +
Sbjct: 76 TRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDESLNVFNQMRK 135
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
T +K D F + AC++ + L R H + SG D + SALV Y+K +++
Sbjct: 136 TGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVDMYAKSGSMED 195
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A +VFD + + V NS+I+G A G + ++ LF+ ML+ G P+E + VG++S
Sbjct: 196 ACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEISFVGVLSACSH 255
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYARCNCMNSAYHVFNSL-FHPDL 271
L++ G+G + +Y V V ++ + R C++ A + N + PD+
Sbjct: 256 TGLVNEGRGYFNLMTQ----NYGIVPDVSHYTCMIDLLGRAGCLDEAENFINGMPVEPDV 311
Query: 272 VTWSALI 278
W AL+
Sbjct: 312 SVWGALL 318
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 169/396 (42%), Gaps = 70/396 (17%)
Query: 100 LKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAI 159
+KP+ FT + + +AC+ + L + H I G D + +ALV Y++ +++A
Sbjct: 6 VKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGSLEDAG 65
Query: 160 KVFDGVSDP-------------------------------DLVLCNSMISGFAHCGFWDK 188
VFD +S+ D+V ++I+G+A G+ D+
Sbjct: 66 HVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQNGYGDE 125
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
SL +F+ M + G D + + ++S + + L +G+ H + ++S F V S LV
Sbjct: 126 SLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVGSALVD 185
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ M A VF+ + + V+W+++ITG +Q G A+ F ++ G K + +
Sbjct: 186 MYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIKPNEIS 245
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
VL+A + + V G GY L Q + +
Sbjct: 246 FVGVLSACSHTGLVNEGR----------------------------GYFNLMTQNYGIVP 277
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
+ + Y +I LG G +A F + + PD S + ALL AC ++ E
Sbjct: 278 D--VSHYTCMIDLLGRAGCLDEAENFINGM---PVEPDVSVWGALLGAC----RIHGNTE 328
Query: 429 IFTRMTEE-YGIQAKTEH-YIYMVKLLGLAGNLEEA 462
+ R+ E G++ + Y+ + + AG ++A
Sbjct: 329 LAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQWDDA 364
>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
Length = 886
Score = 261 bits (666), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 171/589 (29%), Positives = 280/589 (47%), Gaps = 62/589 (10%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAYAL 81
H L+ + F LV +Y+ + L A ++FD+ ++ V WNSI+ A+
Sbjct: 171 FHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVK 230
Query: 82 AHRFNDAKSLFKNLLR------TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
A LF + T + D + I AC+ LP + +H AI +G
Sbjct: 231 GSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGT 290
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM------------------- 176
D+ +AL+ Y+K + +A+ VF+ + D+V N+M
Sbjct: 291 FADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKN 350
Query: 177 ----------------ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
I+G+A G+ ++L F M+ G P+ T++ L+S
Sbjct: 351 MRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGA 410
Query: 221 LSVGQGIHGFCLKSSFDSYDY------------VSSVLVSMYARCNCMNSAYHVFNSL-- 266
LS G H + LK S D V + L+ MY++C +A +FNS+
Sbjct: 411 LSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPR 470
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANVWP 324
++VTW+ +I GY+Q GD AL F ++ + P I+ +L A A +++
Sbjct: 471 RERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRM 530
Query: 325 GAVIHGYVIQH-GFELSV-MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH YV +H +E SV V++ L+DMYSKCG + VF++M +RN +++ S++ G
Sbjct: 531 GKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGY 590
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
G+HG +A + F + + G PD+ +F LL AC H G+V+ G + F M +YG+ A
Sbjct: 591 GMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIAS 650
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
+HY ++ LL +G L++A+ I +P A+ ALLS C ++ N +LAE ++L
Sbjct: 651 AQHYACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLV 710
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
++SN YA RW DV ++R + +G++K G SWV G
Sbjct: 711 SMKAENDGSYTLISNIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQG 759
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 214/481 (44%), Gaps = 76/481 (15%)
Query: 59 ILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
+L P +V+ WN ++RA+ R + A + +LR KPD+FT +AC E
Sbjct: 105 VLERVVPSPAVW-WNLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGE-- 161
Query: 119 DLPGLR---FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP---DLVL 172
LP R HG +G + +ALV YS+ +++A VFD ++ D++
Sbjct: 162 -LPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVIS 220
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRL------GKTPDEYTLVGLISGLWEPSLLSVGQG 226
NS+++ +L LF M + + D ++V ++ L +
Sbjct: 221 WNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKE 280
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
IH + +++ + +V + L+ YA+C M A +VFN + D+V+W+A++TGY+Q G
Sbjct: 281 IHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGK 340
Query: 287 YG-----------------------------------KALYYFRKLNMQGKKADPVLIAS 311
+G +AL F+++ + G + + V I S
Sbjct: 341 FGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIIS 400
Query: 312 VLAAAAKSANVWPGAVIHGYVIQHGF------------ELSVMVSSALVDMYSKCGYLGL 359
+L+A A + G H Y ++ ++V +AL+DMYSKC
Sbjct: 401 LLSACASLGALSQGMETHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKA 460
Query: 360 GIQVFETMS--ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK--GLNPDESTFSALLC 415
+F ++ ERN++T+ +I G +G + A + F ++I K + P+ T S +L
Sbjct: 461 ARTIFNSIPRRERNVVTWTVMIGGYAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILM 520
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIY-----MVKLLGLAGNLEEAYSFIWSLP 470
AC H + G++I +T + + E +Y ++ + G+++ A + S+P
Sbjct: 521 ACAHLSSLRMGKQIHAYVTRHH----EYESSVYFVANCLIDMYSKCGDVDTARNVFDSMP 576
Query: 471 K 471
K
Sbjct: 577 K 577
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 152/328 (46%), Gaps = 10/328 (3%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ +V +Y +A+ V + V V N ++ G D+++ + MLR G
Sbjct: 87 TGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRAGTK 146
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +TL + E G HG + F+S +V + LV+MY+R + A V
Sbjct: 147 PDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDASLV 206
Query: 263 FNSLFHP---DLVTWSALITGYSQQGDYGKALYYFRKLNM------QGKKADPVLIASVL 313
F+ + D+++W++++ + + + AL F ++ +++D + I ++L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIVNIL 266
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A A + IH Y I++G V +AL+D Y+KCG + + VF M ++++
Sbjct: 267 PACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMKDAVNVFNVMEFKDVV 326
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++N+++ G G AFE F+++ ++ + D T+SA++ G + + F +M
Sbjct: 327 SWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAVIAGYAQRGYGQEALDTFQQM 386
Query: 434 TEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
YG + + I ++ G L +
Sbjct: 387 I-LYGSEPNSVTIISLLSACASLGALSQ 413
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 14/208 (6%)
Query: 238 SYDYVS-----SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
S+ YVS + +V+ Y C + A V + V W+ L+ + ++G +A+
Sbjct: 76 SHSYVSPKSLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIG 135
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
++ G K D + L A + + G+ HG + +GFE +V V +ALV MYS
Sbjct: 136 VSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYS 195
Query: 353 KCGYLGLGIQVFETMSER---NIITYNSVILGLGLHGFTYQAFEFFRDII----EKGLNP 405
+ G L VF+ ++ + ++I++NS++ A + F ++ EK N
Sbjct: 196 RSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNE 255
Query: 406 DESTFSA--LLCACCHGGLVNDGREIFT 431
S +L AC + +EI +
Sbjct: 256 RSDIISIVNILPACASLKALPQTKEIHS 283
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFY--ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSI 75
SL K++HA V + Y A L+ +Y+ + +AR +FD P+R+ W S+
Sbjct: 527 SLRMGKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSM 586
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+ Y + R +A +F + + PD+ ++ + ACS +
Sbjct: 587 MSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHS 628
>gi|147816454|emb|CAN77435.1| hypothetical protein VITISV_017817 [Vitis vinifera]
Length = 601
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 274/529 (51%), Gaps = 4/529 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+ +++ + L F+ + ++R + L +LFD+ +FLWN+IIR ++ +
Sbjct: 25 KQTTSILITSGLAHHTFFLSDILR--SATKDLGYTLLLFDRLATPYIFLWNTIIRGFSAS 82
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ + L + PD T+ + +A S+ + +F + + GL D+
Sbjct: 83 SQPQMVLVAYSRLRNHGVIPDRHTFPLLLKAFSKLRNENPFQF-YAHIVKFGLDFDAFVQ 141
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++LV+A++ +D + ++F + D+V ++I+G G ++L+ F M G
Sbjct: 142 NSLVSAFAHCGYVDCSRRLFIETAKKDVVSWTALINGCLRNGRAVEALECFVEMRSSGVE 201
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD-YVSSVLVSMYARCNCMNSAYH 261
DE T+V ++ + G+ +HGF ++S +D YV S LV MY++C + A
Sbjct: 202 VDEVTIVSVLCAAAMLRDVWFGRWVHGFYVESGRVIWDVYVGSALVDMYSKCGYCDDAVK 261
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
VFN + +LV+W ALI GY Q Y +AL F+++ ++G + + + S L A A+ +
Sbjct: 262 VFNEMPTRNLVSWGALIAGYVQCNRYKEALKVFQEMIIEGIEPNQSTVTSALTACAQLGS 321
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G +H YV + L+ + +ALVDMYSKCG + + VFE + +++ + ++I G
Sbjct: 322 LDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMING 381
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
L + G + F +I + P+ TF +L AC HGGLV++G E+F M +Y ++
Sbjct: 382 LAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACAHGGLVDEGLELFRLMICDYRLEP 441
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+HY MV LLG AG LEEA FI S+P P V GAL S C I+ +L E + + L
Sbjct: 442 NVDHYGCMVDLLGRAGRLEEAIKFIESMPMEPTPGVWGALFSGCMIHKAFELGEHIGNHL 501
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+ P ++L+N Y+ +W+ +R + G+ K G SW+
Sbjct: 502 IKLQPHHSGRYILLANLYSRCQKWEAAANVRRLMKGKGVDKSPGCSWIE 550
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL + + LH V ++ L + T LV +Y+ + A ++F+K P + V+ W ++I
Sbjct: 321 SLDQGRWLHEYVDRSKLGLNSKLGTALVDMYSKCGCVDEALLVFEKLPAKDVYPWTAMIN 380
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
A+ + +LF ++R++++P+ T+ + AC+ HGG + GL
Sbjct: 381 GLAMRGDALSSLNLFSQMIRSRVQPNGVTFLGVLSACA-----------HGGLVDEGL 427
>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g63370-like [Glycine max]
Length = 923
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 155/529 (29%), Positives = 273/529 (51%), Gaps = 7/529 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H V K++ D + A L+ +YA + A +F+ R WN+++
Sbjct: 270 IHGAVLKSNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNEL 329
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
++DA + F+++ + KPD + + A + +L + VH AI +GL + +
Sbjct: 330 YSDALNYFRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNT 389
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
LV Y+K + F+ + + DL+ ++I+G+A F +++ LF + G D
Sbjct: 390 LVDMYAKCCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVD 449
Query: 205 EYTLVGLI---SGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
+ ++ SGL + + + IHG+ K + + +V++Y ++ A
Sbjct: 450 PMMIGSVLRACSGLKSRNFI---REIHGYVFKRDLADI-MLQNAIVNVYGEVGHIDYARR 505
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSAN 321
F S+ D+V+W+++IT G +AL F L + D + I S L+A A ++
Sbjct: 506 AFESIRSKDIVSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSS 565
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IHG++I+ GF L ++S+LVDMY+ CG + ++F ++ +R++I + S+I
Sbjct: 566 LKKGKEIHGFLIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINA 625
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
G+HG +A F+ + ++ + PD TF ALL AC H GL+ +G+ F M Y ++
Sbjct: 626 NGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEP 685
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
EHY MV LL + +LEEAY F+ ++P + ALL CHI+ N +L E+ A +L
Sbjct: 686 WPEHYACMVDLLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKEL 745
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
++D ++SN +A DGRW+DV ++R + NGL+K G SW+
Sbjct: 746 LQSDTENSGKYALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIE 794
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 149/486 (30%), Positives = 256/486 (52%), Gaps = 15/486 (3%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
H L+L+L + ++L + ++LHAL+ K+ L F ATKLV +Y L A +FD+
Sbjct: 49 HSLLLDLCVAAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEMS 106
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+R++F WN+++ A+ + ++ +A L+K++ + D T+ + +AC +
Sbjct: 107 ERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAE 166
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV--SDPDLVLCNSMISGFAHC 183
+HG A+ G G +AL+ Y K + A +FDG+ D V NS+IS
Sbjct: 167 IHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVAE 226
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
G ++L LF M +G + YT V + G+ +PS + +G GIHG LKS+ + YV+
Sbjct: 227 GNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVA 286
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
+ L++MYA+C M A VF S+ D V+W+ L++G Q Y AL YFR + G+K
Sbjct: 287 NALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQK 346
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
D V + +++AA+ +S N+ G +H Y I++G + ++ + + LVDMY+KC +
Sbjct: 347 PDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHA 406
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
FE M E+++I++ ++I G + F +A FR + KG++ D ++L AC
Sbjct: 407 FECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSR 466
Query: 424 NDGREI----FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
N REI F R + +Q +V + G G+++ A S+ + D
Sbjct: 467 NFIREIHGYVFKRDLADIMLQNA------IVNVYGEVGHIDYARRAFESI-RSKDIVSWT 519
Query: 480 ALLSCC 485
++++CC
Sbjct: 520 SMITCC 525
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 203/410 (49%), Gaps = 7/410 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD--KTPQRSVFLWNSIIRAYAL 81
E+H + K F L+ +Y L AR+LFD + WNSII A+
Sbjct: 166 EIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVA 225
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSIT 141
+A SLF+ + + + +T+ + + S + +HG + S D
Sbjct: 226 EGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYV 285
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++AL+ Y+K +++A +VF+ + D V N+++SG + +L F M G+
Sbjct: 286 ANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDMQNSGQ 345
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD+ +++ LI+ L G+ +H + +++ DS + + LV MYA+C C+ H
Sbjct: 346 KPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGH 405
Query: 262 VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA--KS 319
F + DL++W+ +I GY+Q + +A+ FRK+ ++G DP++I SVL A + KS
Sbjct: 406 AFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKS 465
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
N IHGYV + +M+ +A+V++Y + G++ + FE++ ++I+++ S+I
Sbjct: 466 RNFIRE--IHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMI 522
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+G +A E F + + + PD + L A + + G+EI
Sbjct: 523 TCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEI 572
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Query: 18 SLSRTKELHA-LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
SL + KE+H L+ K L P A+ LV +YA + ++R +F QR + LW S+I
Sbjct: 565 SLKKGKEIHGFLIRKGFFLEGPI-ASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMI 623
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRF 125
A + N A +LFK + + PD+ T+ + ACS + + G RF
Sbjct: 624 NANGMHGCGNKAIALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRF 673
>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 261 bits (666), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 144/444 (32%), Positives = 246/444 (55%), Gaps = 5/444 (1%)
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ + C+ + L + +H + S D + + L+ Y+K + A K+FD +S D
Sbjct: 21 LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRD 80
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLI---SGLWEPSLLSVGQG 226
+V ++I+G++ +L L MLR+G P+++TL L+ SG+ +L G+
Sbjct: 81 VVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ-GRQ 139
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+HG CL+ +DS YVS ++ MYARC+ + A +F+ + + V+W+ALI GY+++G
Sbjct: 140 LHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQ 199
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
KA F + + K +SVL A A ++ G +H +I+ G +L V +
Sbjct: 200 GDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNT 259
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+DMY+K G + +VF+ +++R+++++NS++ G HG A + F +++ + P+
Sbjct: 260 LLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPN 319
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
+ TF +L AC H GL+++GR F M ++Y ++ + HY+ MV LLG AG+L+ A FI
Sbjct: 320 DITFLCVLTACSHAGLLDEGRHYFD-MMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFI 378
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
+P AV GALL C ++ N +L A +FE D V+L N YA GRW+
Sbjct: 379 SEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAGRWN 438
Query: 527 DVMKLRDDIVDNGLRKEAGVSWVS 550
D K+R + ++G++KE SWV
Sbjct: 439 DAAKVRKMMKESGVKKEPACSWVE 462
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 169/366 (46%), Gaps = 2/366 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
L+ K +HAL+ + D L+ LYA L AR LFD+ R V W ++I
Sbjct: 30 KLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSSRDVVTWTALIT 89
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS--ENSDLPGLRFVHGGAIVSGL 135
Y+ R DA L +LR LKP+ FT A + +A S ++D+ R +HG + G
Sbjct: 90 GYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGY 149
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
+ S A++ Y++ ++EA +FD + + V N++I+G+A G DK+ LF
Sbjct: 150 DSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKGQGDKAFCLFSN 209
Query: 196 MLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNC 255
MLR P +T ++ L G+ +H +K +V + L+ MYA+
Sbjct: 210 MLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGS 269
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+ A VF+ L D+V+W++++TGYSQ G AL F ++ + + VL A
Sbjct: 270 IEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTA 329
Query: 316 AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+ + + G + ++ E + +VD+ + G+L IQ M +
Sbjct: 330 CSHAGLLDEGRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMPIKPTAAV 389
Query: 376 NSVILG 381
+LG
Sbjct: 390 WGALLG 395
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 56/107 (52%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S SL + K +HAL+ K F L+ +YA + + A+ +FD+ +R
Sbjct: 225 VLCACASMGSLEQGKWVHALMIKWGEKLVAFVGNTLLDMYAKSGSIEDAKKVFDRLAKRD 284
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V WNS++ Y+ A F+ +LRT++ P++ T+ C+ ACS
Sbjct: 285 VVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACS 331
>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 998
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/527 (30%), Positives = 261/527 (49%), Gaps = 1/527 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H V ++ ++ D + Y + + R LFD+ ++V W ++I
Sbjct: 262 KQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQN 321
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
DA LF + R PD F + +C L R VH AI + D
Sbjct: 322 SFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVK 381
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L+ Y+K + +A KVF+ ++ DLV N+MI G++ ++L LF M +
Sbjct: 382 NGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSS 441
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P V L+ L + IHG +K ++ S L+ +Y++C+ + A V
Sbjct: 442 PTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLV 501
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
F + D+V W+A+ +GY+QQ + ++L ++ L M K + A+V+ AA+ A++
Sbjct: 502 FEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASL 561
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G H VI+ GF+ V++ LVDMY+K G + + F + + ++ +NS+I
Sbjct: 562 RHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATY 621
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A + F D+I +GL P+ TF +L AC H GL++ G + F M+ ++GI+
Sbjct: 622 AQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMS-QFGIEPG 680
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY+ MV LLG AG L EA FI +P V +LLS C + GN +L A
Sbjct: 681 IEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAAEMAI 740
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+P V+LSN +A G W +V +LR+ + +G+ KE G SW+
Sbjct: 741 SCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWI 787
Score = 194 bits (492), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 218/440 (49%), Gaps = 1/440 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H LV K ++D + T L+ Y + + AR+LFD ++ F W +II Y+
Sbjct: 162 QIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQG 221
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
R + LF + + PD + + + AC L G + +H + SG+ D +
Sbjct: 222 RSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVN 281
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
+ Y K + K+FD + D ++V ++I+G F +L LF M R+G P
Sbjct: 282 GFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNP 341
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D + +++ L G+ +H + +K + D+ D+V + L+ MYA+C+ + A VF
Sbjct: 342 DAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVF 401
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
N + DLV+++A+I GYS+Q +AL FR++ + ++ S+L +A ++
Sbjct: 402 NLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLE 461
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
IHG +I++G L SAL+D+YSKC +G VFE + +++I+ + ++ G
Sbjct: 462 LSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYT 521
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKT 443
++ + ++ + L P+E TF+A++ A + + G++ F + G
Sbjct: 522 QQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQ-FHNQVIKMGFDDDP 580
Query: 444 EHYIYMVKLLGLAGNLEEAY 463
+V + +G++EEA+
Sbjct: 581 FVANTLVDMYAKSGSIEEAH 600
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/577 (23%), Positives = 247/577 (42%), Gaps = 78/577 (13%)
Query: 37 DPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL 96
D F L+ Y+ N++ A LFD +++ W+S++ Y +A LF +
Sbjct: 73 DIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVSMYTHHSHCLEALMLFVQFM 132
Query: 97 RT-QLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
R+ KP+ + A + RAC++ L P L+ +HG + G +D ++L+ Y+K +
Sbjct: 133 RSCNEKPNEYILASVVRACTQFGGLNPALQ-IHGLVVKGGYVQDVYVCTSLIDFYTKHAC 191
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISG 214
ID+A +FDG+ ++I+G++ G SL+LFD M PD+Y L ++S
Sbjct: 192 IDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSA 251
Query: 215 LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTW 274
L G+ IH + L+S + + + Y +C+ + +F+ + ++V+W
Sbjct: 252 CLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDRMVDKNVVSW 311
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ +I G Q + AL F ++ G D SVL + + G +H Y I+
Sbjct: 312 TTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIK 371
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
+ V + L+DMY+KC L +VF M+ ++++YN++I G +A +
Sbjct: 372 VNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDL 431
Query: 395 FRD-----------------------------------IIEKGLNPDESTFSALLCACCH 419
FR+ II+ G++ DE SAL+
Sbjct: 432 FREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSK 491
Query: 420 GGLVNDGREIF-----------TRMTEEYGIQAKTEHYIYMVKLLGL------------- 455
V D R +F T M Y Q++ E + + K L +
Sbjct: 492 CSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAV 551
Query: 456 ---AGNL------EEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF--EN 504
A N+ ++ ++ + + DP V+ L+ +Y S E AH+ F N
Sbjct: 552 ITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVD---MYAKSGSIE-EAHKAFISTN 607
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
+ M++ TYA+ G + +++ +D++ GL+
Sbjct: 608 WKDTACWNSMIA-TYAQHGEAEKALQVFEDMIMEGLK 643
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 164/316 (51%), Gaps = 2/316 (0%)
Query: 116 ENSDLPGLRFVHGGAIVSGLGR-DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCN 174
++ +P + +H +V G + D + L+ AYSKL+L++ A K+FD +S +LV +
Sbjct: 50 QSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWS 109
Query: 175 SMISGFAHCGFWDKSLQLF-DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
SM+S + H ++L LF +M + P+EY L ++ + L+ IHG +K
Sbjct: 110 SMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVK 169
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ YV + L+ Y + C++ A +F+ L TW+ +I GYS+QG +L
Sbjct: 170 GGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKL 229
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F ++ D +++SVL+A + G IH YV++ G + V + + +D Y K
Sbjct: 230 FDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFK 289
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
C + LG ++F+ M ++N++++ +VI G + F A + F ++ G NPD +++
Sbjct: 290 CHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSV 349
Query: 414 LCACCHGGLVNDGREI 429
L +C + GR++
Sbjct: 350 LNSCGSLVALEKGRQV 365
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/414 (26%), Positives = 180/414 (43%), Gaps = 44/414 (10%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +++HA K ++ D F L+ +YA + L AR +F+ + +N++I
Sbjct: 358 ALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKVFNLMAAIDLVSYNAMIE 417
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y+ + +A LF+ + + P + + + L +HG I G+
Sbjct: 418 GYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSL 477
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D SAL+ YSK S + +A VF+ + D D+V+ +M SG+ ++SL+L+ +
Sbjct: 478 DEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQ 537
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
P+E+T +I+ + L GQ H +K FD +V++ LV MYA+ +
Sbjct: 538 MSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIE 597
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A+ F S D W+++I Y+Q G+ KAL F + M+G K + V VL+A
Sbjct: 598 EAHKAFISTNWKDTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSAC- 656
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS----ERNII 373
S G L LG F++MS E I
Sbjct: 657 ----------------------------------SHTGLLDLGFDHFDSMSQFGIEPGIE 682
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEK-GLNPDESTFSALLCACCHGGLVNDG 426
Y ++ LG G Y+A EF IEK + + +LL AC G V G
Sbjct: 683 HYVCMVSLLGRAGKLYEAKEF----IEKMPIKQAAVVWRSLLSACRVSGNVELG 732
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 148/329 (44%), Gaps = 27/329 (8%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L +S S L + ++H L+ K + D F + L+ +Y+ + + AR++F++ +
Sbjct: 450 LLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKD 509
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ +W ++ Y ++ L+K L ++LKP+ FT+A + A S + L + H
Sbjct: 510 IVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHN 569
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I G D ++ LV Y+K I+EA K F + D NSMI+ +A G +K
Sbjct: 570 QVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEK 629
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS---- 244
+LQ+F+ M+ G P+ T VG++S LL +G FD +D +S
Sbjct: 630 ALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLG-----------FDHFDSMSQFGIE 678
Query: 245 -------VLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRK 296
+VS+ R + A + V W +L++ G+ Y +
Sbjct: 679 PGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYA-AE 737
Query: 297 LNMQGKKADP---VLIASVLAAAAKSANV 322
+ + AD VL++++ A+ NV
Sbjct: 738 MAISCNPADSGSYVLLSNIFASKGMWVNV 766
>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
Length = 744
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/563 (30%), Positives = 278/563 (49%), Gaps = 33/563 (5%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
SR K LH + K D F L+ +Y ++ L A LFD+ P+R+ + ++I+ Y
Sbjct: 55 SRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGY 114
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRD 138
A + RF +A LF L R + + F + I + ++D L + +H G +
Sbjct: 115 AESVRFLEAIELFVRLHREGHELNPFVFTTILKLLV-STDCGELGWGIHACIFKLGHESN 173
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
+ +AL+ AYS +D A +VFDG+ D+V M++ FA + ++L+LF M
Sbjct: 174 AFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWTGMVTCFAENDCFKEALKLFSQMRM 233
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
+G P+ +T + VG+ +HG LKS ++ YV L+ +Y + ++
Sbjct: 234 VGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVALLDLYTKSGDIDD 293
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A F + D++ WS +I Y+Q +A+ F ++ + ASVL A A
Sbjct: 294 ARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACAT 353
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH +VI+ G V VS+AL+D+Y+KCG + +++F RN +T+N+V
Sbjct: 354 MEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTV 413
Query: 379 ILGLGLHGFTYQAFEFFRDI------------------------IEKGLN-------PDE 407
I+G G +A F ++ +E GL PD+
Sbjct: 414 IVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKPDK 473
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
TF +L AC + GL++ G+ FT M +++GI+ EHY MV LLG G+L++A I
Sbjct: 474 LTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLID 533
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
+P V ALL C I+ + +L I A ++ E +P+ A V+LSN YA RWD+
Sbjct: 534 EIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDN 593
Query: 528 VMKLRDDIVDNGLRKEAGVSWVS 550
V +R ++ G++KE G+SW+
Sbjct: 594 VASVRKNMKRKGVKKEPGLSWIE 616
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/334 (23%), Positives = 161/334 (48%), Gaps = 3/334 (0%)
Query: 99 QLKPDNFT---YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
+ P F YA + C + + + +H + G D + L+ Y K +
Sbjct: 30 HVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFL 89
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+A K+FD + + + + ++I G+A + ++++LF + R G + + ++ L
Sbjct: 90 CDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLL 149
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
+G GIH K +S +V + L+ Y+ C ++ A VF+ + + D+V+W+
Sbjct: 150 VSTDCGELGWGIHACIFKLGHESNAFVGTALIDAYSVCGRVDVAREVFDGILYKDMVSWT 209
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
++T +++ + +AL F ++ M G K + ASV A G +HG ++
Sbjct: 210 GMVTCFAENDCFKEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKS 269
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
+EL + V AL+D+Y+K G + + FE + ++++I ++ +I + +A E F
Sbjct: 270 RYELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMF 329
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
+ + + P++ TF+++L AC +N G +I
Sbjct: 330 FQMRQALVLPNQFTFASVLQACATMEGLNLGNQI 363
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 11/192 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ + + L+ ++H V K L D F + L+ +YA + ++ LF ++P R+
Sbjct: 347 VLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRN 406
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
WN++I + A LF N+L +++ TY+ RAC+ + L PGL+ +H
Sbjct: 407 DVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQ-IH 465
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDG-VSDPDLVLC----NSMISGFAH 182
+ D +T +++A + L+D+ F + D + C M+
Sbjct: 466 SLTVKP----DKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGR 521
Query: 183 CGFWDKSLQLFD 194
G DK+++L D
Sbjct: 522 GGHLDKAVKLID 533
>gi|7413540|emb|CAB86020.1| putative protein [Arabidopsis thaliana]
gi|9758453|dbj|BAB08982.1| selenium-binding protein-like [Arabidopsis thaliana]
Length = 864
Score = 261 bits (666), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/494 (31%), Positives = 251/494 (50%), Gaps = 15/494 (3%)
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLL------RTQLKPDNFTYAC--------ITRACS 115
F N +IR L R N + SL +N+ + ++ P ++ I + C+
Sbjct: 6 FTVNFLIRCKVLPRRSNTS-SLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCA 64
Query: 116 ENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNS 175
N + + HG I L D + L+ AYSK ++ A +VFDG+ + LV N+
Sbjct: 65 RNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNT 124
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
MI + ++L +F M G E+T+ ++S + +H +K+
Sbjct: 125 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 184
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR 295
D YV + L+ +YA+C + A VF S+ VTWS+++ GY Q +Y +AL +R
Sbjct: 185 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 244
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
+ + + ++SV+ A + A + G +H + + GF +V V+S+ VDMY+KCG
Sbjct: 245 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCG 304
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
L +F + E+N+ +N++I G H + F + + G++P+E TFS+LL
Sbjct: 305 SLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLS 364
Query: 416 ACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDP 475
C H GLV +GR F M YG+ HY MV +LG AG L EAY I S+P
Sbjct: 365 VCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTA 424
Query: 476 AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
++ G+LL+ C +Y N +LAE+ A +LFE +P V+LSN YA + +W+++ K R +
Sbjct: 425 SIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLL 484
Query: 536 VDNGLRKEAGVSWV 549
D ++K G SW+
Sbjct: 485 RDCDVKKVRGKSWI 498
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 173/365 (47%), Gaps = 1/365 (0%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDK 63
NL +L+L + ++ K H + + L D L+ Y+ + AR +FD
Sbjct: 54 NLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDG 113
Query: 64 TPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+RS+ WN++I Y ++A +F + K FT + + AC N D
Sbjct: 114 MLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALEC 173
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+ +H ++ + + + +AL+ Y+K +I +A++VF+ + D V +SM++G+
Sbjct: 174 KKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQN 233
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
++++L L+ R+ +++TL +I + L G+ +H KS F S +V+
Sbjct: 234 KNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVA 293
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKK 303
S V MYA+C + +Y +F+ + +L W+ +I+G+++ + + F K+ G
Sbjct: 294 SSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMH 353
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYV-IQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ V +S+L+ + V G + +G +V+ S +VD+ + G L +
Sbjct: 354 PNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYE 413
Query: 363 VFETM 367
+ +++
Sbjct: 414 LIKSI 418
>gi|297736926|emb|CBI26127.3| unnamed protein product [Vitis vinifera]
Length = 603
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 160/552 (28%), Positives = 270/552 (48%), Gaps = 45/552 (8%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
+K+V L L + SAR LFD+ P + WN+++ +Y+ A LF ++ +
Sbjct: 10 SKIVALAKLGRI-TSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSR 68
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--------------GR---------- 137
PD FT+ AC+ +L +H +VSG G+
Sbjct: 69 PDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 138 -------DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ ++ +L+ AY+ L D A VFDG+ + N MISG+ CG + L
Sbjct: 129 FEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCL 188
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS-------FDSYDYVS 243
LF M PD++T L++ L E S G +HGF +KS F+S ++
Sbjct: 189 GLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGILT 248
Query: 244 SV----LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
V ++ + + + A+ VF ++V+W+++ITGY++ G +AL +F K+
Sbjct: 249 QVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMME 308
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
+ D +VL A + A + G +IHG +I +GF V V + LV+MY+KCG +
Sbjct: 309 NHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHAYVDVGNGLVNMYAKCGDIQG 368
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
F+ + ++++++N+++ GLG+HG QA E + +++ G+ PD+ TF LL C H
Sbjct: 369 SNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMVASGMKPDKVTFIGLLMTCSH 428
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI--WSLPKPVDPAV 477
GL+ G+ +F M YG+ +TEH + MV LLG G L +A + +S + ++
Sbjct: 429 SGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYLAQARELVDEYSRTGRAETSL 488
Query: 478 SGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVD 537
ALL C + + + L +P+K V+LSN Y G+W + +R + D
Sbjct: 489 PEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSNLYCVSGQWKEAEMVRKTMTD 548
Query: 538 NGLRKEAGVSWV 549
+G++K G SW+
Sbjct: 549 HGVKKMPGCSWI 560
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 156/361 (43%), Gaps = 43/361 (11%)
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++ + A +KL I A ++FD + D V N+M++ ++ G ++L LF M
Sbjct: 8 TTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANS 67
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD +T +S L G IH + S S V + L+ MY +C SA
Sbjct: 68 RPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARR 127
Query: 262 VFNSLFHPDLVTWSAL-------------------------------ITGYSQQGDYGKA 290
VF + + V+W +L I+GY Q GD
Sbjct: 128 VFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELC 187
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE-----------L 339
L F+K+ + D ++++ A + G ++HG++I+ G++ L
Sbjct: 188 LGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWDDVMKVFESIGIL 247
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
+ + +A++D + K G VF+ E+N++++ S+I G +G QA FF ++
Sbjct: 248 TQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMITGYARNGHGEQALSFFVKMM 307
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
E + PD+ TF A+L AC + G+ I + YG A + +V + G++
Sbjct: 308 ENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSII-HYGFHAYVDVGNGLVNMYAKCGDI 366
Query: 460 E 460
+
Sbjct: 367 Q 367
>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Cucumis sativus]
Length = 1067
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 170/550 (30%), Positives = 271/550 (49%), Gaps = 10/550 (1%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPF-YATKLVRLYALNNVLPSARILFDKT 64
F VLE K S E+HA + ++ LL L+ +YA + A ++F
Sbjct: 396 EFHVLENGKRKGS-----EVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRLM 450
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
+ WNS+I +F +A F+ + RT+L P NFT +C+ +
Sbjct: 451 DNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGE 510
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H + GL D S+AL+ Y + + E K F + D D V NS+I A
Sbjct: 511 QLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSE 570
Query: 185 -FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
++++ F M+R G P+ T + +++ + SL +G+ IH LK + + +
Sbjct: 571 PSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIE 630
Query: 244 SVLVSMYARCNCMNSAYHVFNSLF-HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
+ L++ Y +C M ++F+ + D V+W+++I+GY KA+ + +G+
Sbjct: 631 NALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQ 690
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ D A+VL+A A A + G +HG ++ E +++ SALVDMY+KCG + +
Sbjct: 691 RLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYASR 750
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
FE M RN+ ++NS+I G HG ++ + F + +G PD TF +L AC H GL
Sbjct: 751 FFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAGL 810
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP-KPVDPAVSGAL 481
VN+G F M+E YG+ + EH+ MV LLG G L + F+ +P KP L
Sbjct: 811 VNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTVL 870
Query: 482 LSCCHIYG-NSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
+CC G N+ L A L E +P ++LSN YA G+WDDV K R + +
Sbjct: 871 GACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAFV 930
Query: 541 RKEAGVSWVS 550
+KEAG SWV+
Sbjct: 931 KKEAGCSWVT 940
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 202/423 (47%), Gaps = 17/423 (4%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
+ELH + K + D F L+ +YA L S R +FD+ P R++ W+ +I Y
Sbjct: 92 AEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVSWSCLISGYTR 151
Query: 82 AHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSGLGRD 138
N+A LF+ ++ P+++ + + RAC E + GL+F +HG + D
Sbjct: 152 NRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEY-GLKFGMQIHGLMSKTQYVND 210
Query: 139 SITSSALVTAY-SKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S+ L++ Y + L ++D A + FD + +LV NSMIS + G + +F M
Sbjct: 211 VTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQ 270
Query: 198 RL----GKTPDEYTLVGLISGLWE--PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
+ G P+EYT LIS S L + + + KS F YV S LVS +A
Sbjct: 271 KEVMGDGLKPNEYTFGSLISATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFA 330
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
+ + A ++F + + ++V+ + LI G +Q +A+ F ++ + +P
Sbjct: 331 KAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMK-DSVELNPNSYMI 389
Query: 312 VLAAAAK----SANVWPGAVIHGYVIQHG-FELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+L A + G+ +H ++I+ G + + + L++MY+KCG + VF
Sbjct: 390 ILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACVVFRL 449
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
M ++ +T+NS+I GL + +A + F+++ L P T + L +C G ++ G
Sbjct: 450 MDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVG 509
Query: 427 REI 429
++
Sbjct: 510 EQL 512
>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 867
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 268/529 (50%), Gaps = 6/529 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++HA+V K L+ LY+ +L AR +FDK R WNS+I Y
Sbjct: 215 QVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNG 274
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ + +F + +KP + T+A + ++C+ +L ++ + A+ SG D I +
Sbjct: 275 QDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVIT 334
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
AL+ A SK +D+A+ +F + + ++V +MISG G D+++ LF M R G
Sbjct: 335 ALMVALSKCKEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVK 394
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ +T +++ + P +S +H +K++++ V + L+ Y + A V
Sbjct: 395 PNHFTYSAILTVHY-PVFVS---EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKV 450
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL-AAAAKSAN 321
F + DL+ WSA++ GY+Q G+ +A F +L +G K + +SV+ A A+ +A
Sbjct: 451 FEIIEAKDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAA 510
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
G H Y I+ ++ VSSALV MY+K G + +VF+ ER+++++NS+I G
Sbjct: 511 AEQGKQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISG 570
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
HG +A E F ++ ++ ++ D TF ++ AC H GLV G++ F M ++ I
Sbjct: 571 YSQHGQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINP 630
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+HY M+ L AG LE+A I +P P V LL ++ N +L E+ A +L
Sbjct: 631 TMKHYSCMIDLYSRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKL 690
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
P A V+LSN YA G W + +R + ++KE G SW+
Sbjct: 691 ISLQPEDSAAYVLLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIE 739
Score = 155 bits (393), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 183/361 (50%), Gaps = 3/361 (0%)
Query: 57 ARILFDKTPQRSVFL--WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
A LFDK P R L N ++ +Y+ + +A +LF +LL + L+PD T +C+ C
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 115 SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCN 174
+ + D R VH + GL ++LV Y K +++ +VFD + + ++V
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 175 SMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS 234
S+++G++ G + +LF M G P+ YT+ +I+ L ++ +G +H +K
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKH 223
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
F+ V + L+S+Y+R + A VF+ + D VTW+++I GY + G + F
Sbjct: 224 GFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIF 283
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC 354
K+ + G K + ASV+ + A + ++ ++ GF +V +AL+ SKC
Sbjct: 284 NKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKC 343
Query: 355 GYLGLGIQVFETMSE-RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
+ + +F M E +N++++ ++I G +G QA F + +G+ P+ T+SA+
Sbjct: 344 KEMDDALSLFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAI 403
Query: 414 L 414
L
Sbjct: 404 L 404
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 196/399 (49%), Gaps = 11/399 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+++H K L+ T LV +Y + R +FD+ +R+V W S++ Y+
Sbjct: 113 RQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWN 172
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-VHGGAIVSGLGRDSIT 141
+ LF + + P+ +T + + A N + G+ VH + G
Sbjct: 173 GLYGYVWELFCQMQYEGVLPNRYTVSTVIAALV-NEGVVGIGLQVHAMVVKHGFEEAIPV 231
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
++L++ YS+L ++ +A VFD + D V NSMI+G+ G + ++F+ M G
Sbjct: 232 FNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGV 291
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
P T +I L++ + + LKS F + V + L+ ++C M+ A
Sbjct: 292 KPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCKEMDDALS 351
Query: 262 VFNSLFH-PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F+ + ++V+W+A+I+G Q G +A+ F ++ +G K + +++L
Sbjct: 352 LFSLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPNHFTYSAILTVH---- 407
Query: 321 NVWPGAV--IHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+P V +H VI+ +E S V +AL+D Y K G ++VFE + ++++ ++++
Sbjct: 408 --YPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAWSAM 465
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ G G T +A + F +I++G+ P+E TFS+++ AC
Sbjct: 466 LAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINAC 504
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 122/233 (52%), Gaps = 6/233 (2%)
Query: 188 KSLQLFDWMLRLGKTPDEYTL---VGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++L LF +L PDE TL + +G + L G+ +H C+K + V +
Sbjct: 76 EALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKL---GRQVHCQCVKFGLVDHVSVGT 132
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
LV MY + +N VF+ + ++V+W++L+ GYS G YG F ++ +G
Sbjct: 133 SLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLP 192
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
+ +++V+AA V G +H V++HGFE ++ V ++L+ +YS+ G L VF
Sbjct: 193 NRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVF 252
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+ M R+ +T+NS+I G +G + FE F + G+ P TF++++ +C
Sbjct: 253 DKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSC 305
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 98/206 (47%), Gaps = 3/206 (1%)
Query: 259 AYHVFNSLFH--PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAA 316
A+++F+ + H L + L+ YS+ +AL F L + D ++ V
Sbjct: 44 AHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNIC 103
Query: 317 AKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYN 376
A S + G +H ++ G V V ++LVDMY K + G +VF+ M ERN++++
Sbjct: 104 AGSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMGERNVVSWT 163
Query: 377 SVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
S++ G +G +E F + +G+ P+ T S ++ A + G+V G ++ M +
Sbjct: 164 SLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA-MVVK 222
Query: 437 YGIQAKTEHYIYMVKLLGLAGNLEEA 462
+G + + ++ L G L +A
Sbjct: 223 HGFEEAIPVFNSLISLYSRLGMLRDA 248
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 1/147 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K+ HA K L ++ LV +YA + SA +F + +R + WNS+I Y+
Sbjct: 515 KQFHAYAIKMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQH 574
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLGRDSIT 141
+ A +F + + + D T+ + AC+ + G ++ + +
Sbjct: 575 GQAKKALEVFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKH 634
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDP 168
S ++ YS+ ++++A+ + + + P
Sbjct: 635 YSCMIDLYSRAGMLEKAMGIINEMPFP 661
>gi|297798072|ref|XP_002866920.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312756|gb|EFH43179.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 559
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 166/559 (29%), Positives = 278/559 (49%), Gaps = 14/559 (2%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLP--SAR 58
M+ ++LEL SL K++ + +LRD + K+V + S+
Sbjct: 1 MYLTEKPVLLELISRCSSLRVFKQIQTQLISRDILRDELFINKVVTFLGKSADFATYSSV 60
Query: 59 ILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
IL S F +N+++ +YA+ + +++ + PD FT+ + +AC + S
Sbjct: 61 ILHSIRSVLSSFSYNTLLSSYAVCDKPRMTIFVYRVFVSNGFSPDMFTFPPVFKACGKFS 120
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
+ + +HG G D ++LV Y A KVFD + D+V +I+
Sbjct: 121 GIREGKQIHGTVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFDQMPVRDVVSWTGIIT 180
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDS 238
GF G + ++L F ++ P+ T V + LS+G+GIHG LK +
Sbjct: 181 GFTRTGLYKEALDTFS---KMDVEPNLATYVCALVSSGRVGCLSLGKGIHGLILKRASLI 237
Query: 239 YDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN 298
+ L+ MY +C ++ A VF L D V+W+++I+G +A+ F +
Sbjct: 238 SLETGNALIDMYVKCEQLSDAMTVFGELQKKDKVSWNSMISGLVHCERSNEAIELFSMMQ 297
Query: 299 MQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G K D ++ SVL+A A V G +H YV+ G + + +A+VDMY+KCGY+
Sbjct: 298 TSSGIKPDGHILTSVLSACASLGAVDYGRWVHEYVLSAGIKWDTHIGTAIVDMYAKCGYI 357
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+++F + +N+ T+N+++ GL +HG +++ +F ++++ G P+ TF A+L AC
Sbjct: 358 ETALKIFNGIRRKNVFTWNALLGGLAIHGHGHESLRYFEEMVKLGFKPNLVTFLAILNAC 417
Query: 418 CHGGLVNDGREIFTRM-TEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA 476
CH GLV++GR F +M T EY + K EHY ++ L AG L+EA I ++P D
Sbjct: 418 CHTGLVDEGRRYFHKMKTREYNLSPKLEHYGCLIDLFCRAGLLDEALELIKAMPVKPDVR 477
Query: 477 VSGALLSCCHIYGN-SDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDI 535
+ GA+LS C G +L + + E + V+LSN +A + RWDDV ++R
Sbjct: 478 ICGAVLSACKSRGTLMELPKEILDSFLEMEFEDSGVYVLLSNIFAANRRWDDVSRIRR-- 535
Query: 536 VDNGLRKEAGVSWVSGSSN 554
L K G+S V GSS+
Sbjct: 536 ----LMKVKGISKVPGSSS 550
>gi|357162206|ref|XP_003579338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g20730-like [Brachypodium distachyon]
Length = 558
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 271/530 (51%), Gaps = 1/530 (0%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
R + +H + ++ D +TKLV YA + + +AR +FD P RSV W +++ Y+
Sbjct: 29 RGRSVHHQIIASAAPPDLHMSTKLVIFYAKHGDVAAARKVFDGMPHRSVVSWTAMVSGYS 88
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+ +A LF +L + ++P+ FTY + AC+ + VH D
Sbjct: 89 RNGQTREALDLFTLMLASGVRPNQFTYGSVASACAGAGCVRSGEQVHACVAKGRFVGDVF 148
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG 200
SAL+ + + + +A+++F + D+V N+++ G + +L L MLR
Sbjct: 149 VQSALMDMHLRCGSVVDAMQLFAEMERKDVVAWNALLRGLVERAQYGDALGLLPSMLRGA 208
Query: 201 KTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
PD +T + S+L+ + IH +K + V ++ YA+C ++SA
Sbjct: 209 MLPDHFTFGSALKACGAVSVLANVELIHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSAR 268
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+++S+ PDLV+ +ALI+GYS ++ + A+ F K++ +G + D VL++S+L A
Sbjct: 269 LIYDSICEPDLVSSTALISGYSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLCANV 328
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
A++ G IH Y+ + V + +A+VDMY+K G + F+ M RN++++ S+I
Sbjct: 329 ASLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSLI 388
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +GF A F ++E G+ P++ TF +LL AC H GL + G E FT M +YGI
Sbjct: 389 TACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHSGLTSKGMEYFTSMMSKYGI 448
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
+ EHY + LL G L++A+ + ++ + ++ GA+L C +G+ L E A
Sbjct: 449 DPRAEHYSSAIDLLARGGQLKDAWKLVQNIDIEPNSSMFGAMLGACKTHGSMPLGETAAK 508
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
LF P + +L+N YAE W+D + R + + K AG S +
Sbjct: 509 NLFTIAPESSVHYAVLANMYAESSLWEDAQRTRKLMAETSGGKVAGCSVI 558
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 92/210 (43%), Gaps = 7/210 (3%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L+ + +H + K + ++ YA L SAR+++D + + ++I
Sbjct: 229 LANVELIHTCIIKLGYWGEKVVIGSIIDAYAKCRGLSSARLIYDSICEPDLVSSTALISG 288
Query: 79 YALAHRFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVSG 134
Y++ + DA LF + R L+ D + + C +++ LRF +H
Sbjct: 289 YSMDRNHSEDAMELFCKIHRKGLRIDGVLLSSLLGLC---ANVASLRFGTQIHAYMCKRQ 345
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
D +A+V Y+K +A + FD + ++V S+I+ GF + ++ LFD
Sbjct: 346 PMTDVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSLITACGKNGFGEDAVSLFD 405
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
M+ G P++ T + L+S L S G
Sbjct: 406 RMVEDGVKPNDVTFLSLLSACGHSGLTSKG 435
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL ++HA + K + D +V +YA AR FD+ P R+V W S+I
Sbjct: 330 SLRFGTQIHAYMCKRQPMTDVALDNAVVDMYAKAGEFADARRAFDEMPYRNVVSWTSLIT 389
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
A DA SLF ++ +KP++ T+ + AC +
Sbjct: 390 ACGKNGFGEDAVSLFDRMVEDGVKPNDVTFLSLLSACGHS 429
>gi|414869795|tpg|DAA48352.1| TPA: hypothetical protein ZEAMMB73_382586 [Zea mays]
Length = 687
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 278/544 (51%), Gaps = 28/544 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKT--------PQRSVF 70
L +ELHA + K L RDP A+KL+ YAL +P+ R +F P +
Sbjct: 111 LRHVQELHAQLLKQGLHRDPHTASKLIASYALLRRVPACRCVFSAAVALPNSPFPSSTTL 170
Query: 71 LWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGA 130
L +++RAYAL + A ++F ++ Q FTY+ + +A + P +R H
Sbjct: 171 LTKTLLRAYALNSLPHAALAVFLDVPLRQR--GTFTYSFLIKALAAAGLTP-VRGAHAHV 227
Query: 131 IVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ G D+ +AL+ AYSK + +A KVFD ++ D+V N+ ++ G D +
Sbjct: 228 VKLGSAEDTFVGNALIDAYSKNQGLSDAKKVFDEMTTRDVVSWNTAMAAMVRQGEVDAAR 287
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSL---LSVGQGIHGFCLKSSFDSYDYVS-SVL 246
+FD M P++ T+ W L G+ F L + VS S +
Sbjct: 288 SMFDEM------PEKDTVS------WNTMLDGYAKAGEAEKAFELFQRMPGRNVVSWSTV 335
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
VS Y + M A +F+ + +LVTW+ +++ +Q+G +A F ++ + D
Sbjct: 336 VSAYCKKGDMEMARVIFDKMPAKNLVTWTIMVSACAQKGLVEEAGRLFTEMMDAAIELDV 395
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ + S+LAA A+S ++ G IH +V Q S +V +AL+DM+ KCG + +F+T
Sbjct: 396 IAVVSILAACAESGSLALGKRIHRHVRQRKLSRSTLVCNALMDMFCKCGCVNRADYIFDT 455
Query: 367 -MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVND 425
+ E++++++N +I G +HG +A E F + ++G +PD T +L AC H GLV +
Sbjct: 456 EIVEKDLVSWNIIIGGFAMHGPGEKALELFAQMKQQGFHPDAVTLINVLSACTHMGLVEE 515
Query: 426 GREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
GR F M +YGI+ + EHY MV LLG G ++EA I +P + + G+LLS C
Sbjct: 516 GRRFFANMETDYGIKPQIEHYGCMVDLLGRGGLIKEAVDMIKRMPWEPNEVIWGSLLSAC 575
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
++ N + AE+ ++L P +LSN YAE G+W D+ K R + G +K AG
Sbjct: 576 RLHKNVEYAELAVNELSNLQPSSAGNYAVLSNIYAEAGKWSDMAKARVQMKGTGSQKTAG 635
Query: 546 VSWV 549
SW+
Sbjct: 636 SSWI 639
>gi|414881651|tpg|DAA58782.1| TPA: putative pentatricopeptide repeat family protein [Zea mays]
Length = 736
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 163/513 (31%), Positives = 264/513 (51%), Gaps = 2/513 (0%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLL-R 97
F +T L+ +Y + A+ +FD R+ W +++ YA +A LF+ +L +
Sbjct: 159 FVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRLMLQK 218
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
L+ + F + A S L +HG + GL ++LVT Y+K +D
Sbjct: 219 CPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAECMDA 278
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE 217
A++VF + + + ++MI+G+A G + + ++F M G TP E+T VG+++ +
Sbjct: 279 AMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLNACSD 338
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFH-PDLVTWSA 276
L VG+ H +K F++ YV S LV MYA+C C+ A F+ L+ D+V W+A
Sbjct: 339 MGALVVGKQTHCLMVKLGFETQVYVKSALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTA 398
Query: 277 LITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+ITG+ Q G++ +AL + +++ QG + + SVL A A A + G +H +++
Sbjct: 399 MITGHVQNGEHEEALMLYSRMDKQGIIPSYLTVTSVLRACACLAALDLGKQLHAQILKCR 458
Query: 337 FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFR 396
F L V +AL MYSKCG L + VF M +R++I++NS+I HG A + F
Sbjct: 459 FSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRDVISWNSIISVFSQHGRGSDALDMFE 518
Query: 397 DIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLA 456
++ +G PD TF LL AC H GLV+ G F MT++Y + +HY MV +L A
Sbjct: 519 EMKLEGTAPDHITFINLLSACSHMGLVDRGWFYFRAMTKDYNLIPTLDHYACMVDILSRA 578
Query: 457 GNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLS 516
G L+EA FI S+ + +L C + D+ QL E + ++LS
Sbjct: 579 GQLKEAKDFIDSITIDHGTCLWRIVLGACRSLRDFDVGAYAGEQLMELGTEDSSAYILLS 638
Query: 517 NTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
N YA +W+DV ++R + G+ K+ G SWV
Sbjct: 639 NIYAAQRKWNDVERVRHLMRLRGVSKDLGCSWV 671
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 140/295 (47%), Gaps = 1/295 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH LV K L+ LV +YA + +A +F + +R+ W+++I YA
Sbjct: 246 QLHGLVLKDGLVGFVSVENSLVTMYAKAECMDAAMRVFGSSKERNSITWSAMITGYAQNG 305
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
N A +F + + P FT+ + ACS+ L + H + G S
Sbjct: 306 EANCAARMFLQMHSSGFTPTEFTFVGVLNACSDMGALVVGKQTHCLMVKLGFETQVYVKS 365
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
ALV Y+K I +A F + D D+VL +MI+G G +++L L+ M + G
Sbjct: 366 ALVDMYAKCGCIGDAKDGFHQLYDVDDVVLWTAMITGHVQNGEHEEALMLYSRMDKQGII 425
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P T+ ++ + L +G+ +H LK F V + L +MY++C + + V
Sbjct: 426 PSYLTVTSVLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVV 485
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
F + D+++W+++I+ +SQ G AL F ++ ++G D + ++L+A +
Sbjct: 486 FRRMPDRDVISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACS 540
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 149/320 (46%), Gaps = 11/320 (3%)
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKL--SLIDEAIKVFDGVSDP--DLVLCNSMISGFA 181
+HG A+ SG + S++L+T Y L L+ A VF + D+ NS+++ +
Sbjct: 36 LHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLLNPLS 95
Query: 182 HCGFWDKSLQLFDWMLRLGKT--PDEYTLVGLISGLWEPSLLSVGQGIHGFCLK--SSFD 237
+L F M+ + P ++ + S G H K SS
Sbjct: 96 R-HHPVSALSHFRSMMSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKLPSSCG 154
Query: 238 SYD-YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFR- 295
S + +VS+ L++MY + ++ A VF+ + H + V+W+A+++GY+ +A FR
Sbjct: 155 SNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAFELFRL 214
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
L + + + +VL+A + + G +HG V++ G V V ++LV MY+K
Sbjct: 215 MLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTMYAKAE 274
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ ++VF + ERN IT++++I G +G A F + G P E TF +L
Sbjct: 275 CMDAAMRVFGSSKERNSITWSAMITGYAQNGEANCAARMFLQMHSSGFTPTEFTFVGVLN 334
Query: 416 ACCHGGLVNDGREIFTRMTE 435
AC G + G++ M +
Sbjct: 335 ACSDMGALVVGKQTHCLMVK 354
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 126/269 (46%), Gaps = 28/269 (10%)
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN--CMNSAYHVFNSLFHP--DLVTWSALI 278
G+ +HG+ LKS S+ VS+ L++ Y + +AY VF + D+ +W++L+
Sbjct: 32 TGEALHGWALKSGAASHAPVSNSLITFYCSLPRPLLGAAYVVFADIPAALRDVASWNSLL 91
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKA---DPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
S+ AL +FR + M +A P A+ AAA+ + GAV H +
Sbjct: 92 NPLSRHHPV-SALSHFRSM-MSSPEAVLPSPHSFAAAFTAAARVPSASAGAVTHALACKL 149
Query: 336 GFEL---SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
+V VS+AL++MY K G + +VF+ M RN +++ +++ G + +AF
Sbjct: 150 PSSCGSNNVFVSTALLNMYCKLGAVSDAKRVFDGMLHRNAVSWAAMVSGYATGKCSEEAF 209
Query: 393 EFFRDIIEK-GLNPDESTFSALLCACC-----------HGGLVNDGREIFTRMTEE-YGI 439
E FR +++K L +E +A+L A HG ++ DG F + +
Sbjct: 210 ELFRLMLQKCPLEKNEFVTTAVLSAVSVPLGLLMGTQLHGLVLKDGLVGFVSVENSLVTM 269
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWS 468
AK E M + + G+ +E S WS
Sbjct: 270 YAKAE---CMDAAMRVFGSSKERNSITWS 295
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL +L K+LHA + K T L +Y+ L + ++F + P R
Sbjct: 434 VLRACACLAALDLGKQLHAQILKCRFSLGGSVGTALSTMYSKCGNLEDSMVVFRRMPDRD 493
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
V WNSII ++ R +DA +F+ + PD+ T+ + ACS
Sbjct: 494 VISWNSIISVFSQHGRGSDALDMFEEMKLEGTAPDHITFINLLSACS 540
>gi|225432410|ref|XP_002276935.1| PREDICTED: pentatricopeptide repeat-containing protein At2g36980,
mitochondrial-like [Vitis vinifera]
Length = 623
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/572 (28%), Positives = 271/572 (47%), Gaps = 65/572 (11%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
+K+V L L + SAR LFD+ P + WN+++ +Y+ A LF ++ +
Sbjct: 10 SKIVALAKLGRI-TSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANSR 68
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGL--------------GR---------- 137
PD FT+ AC+ +L +H +VSG G+
Sbjct: 69 PDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARRV 128
Query: 138 -------DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSL 190
+ ++ +L+ AY+ L D A VFDG+ + N MISG+ CG + L
Sbjct: 129 FEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELCL 188
Query: 191 QLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMY 250
LF M PD++T L++ L E S G +HGF +KS + VS+ ++S Y
Sbjct: 189 GLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSFY 248
Query: 251 ARCNCMNSAYHVFNSLF-------------------------------HPDLVTWSALIT 279
++ C + VF S+ ++V+W+++IT
Sbjct: 249 SKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMIT 308
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
GY++ G +AL +F K+ + D +VL A + A + G +IHG +I +GF
Sbjct: 309 GYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSIIHYGFHA 368
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDII 399
V V + LV+MY+KCG + F+ + ++++++N+++ GLG+HG QA E + +++
Sbjct: 369 YVDVGNGLVNMYAKCGDIQGSNTAFKEILGKDLVSWNAMLFGLGMHGHATQALELYEEMV 428
Query: 400 EKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNL 459
G+ PD+ TF LL C H GL+ G+ +F M YG+ +TEH + MV LLG G L
Sbjct: 429 ASGMKPDKVTFIGLLMTCSHSGLIEKGQALFESMVSVYGLSQETEHVVCMVDLLGRGGYL 488
Query: 460 EEAYSFI--WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSN 517
+A + +S + ++ ALL C + + + L +P+K V+LSN
Sbjct: 489 AQARELVDEYSRTGRAETSLPEALLGACFAHSEVRMGANLGEYLKVFEPQKEMSYVLLSN 548
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
Y G+W + +R + D+G++K G SW+
Sbjct: 549 LYCVSGQWKEAEMVRKTMTDHGVKKMPGCSWI 580
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/381 (23%), Positives = 160/381 (41%), Gaps = 63/381 (16%)
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+++ + A +KL I A ++FD + D V N+M++ ++ G ++L LF M
Sbjct: 8 TTSKIVALAKLGRITSARRLFDEMPHKDTVAWNAMLASYSQLGLHQQALCLFHHMRIANS 67
Query: 202 TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYH 261
PD +T +S L G IH + S S V + L+ MY +C SA
Sbjct: 68 RPDRFTFTATLSACAGLGELRRGMKIHAQVVVSGCQSSLPVGNSLIDMYGKCLSATSARR 127
Query: 262 VFNSLFHPDLVTWSAL-------------------------------ITGYSQQGDYGKA 290
VF + + V+W +L I+GY Q GD
Sbjct: 128 VFEEMSIMNEVSWCSLLFAYTSSGLFDVARVVFDGMPKKVEIAWNIMISGYGQCGDVELC 187
Query: 291 LYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDM 350
L F+K+ + D ++++ A + G ++HG++I+ G+ +V VS++++
Sbjct: 188 LGLFKKMREDSLQPDQWTFSALVNALCELQEPSYGYMMHGFIIKSGWVKAVEVSNSILSF 247
Query: 351 YSKCG--------YLGLGI-----------------------QVFETMSERNIITYNSVI 379
YSK G + +GI VF+ E+N++++ S+I
Sbjct: 248 YSKLGCKDDVMKVFESIGILTQVSWNAMIDAHMKIGDTHEAFLVFQLAPEKNVVSWTSMI 307
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G QA FF ++E + PD+ TF A+L AC + G+ I + YG
Sbjct: 308 TGYARNGHGEQALSFFVKMMENHIQPDDFTFGAVLHACSSLATLGHGKMIHGSII-HYGF 366
Query: 440 QAKTEHYIYMVKLLGLAGNLE 460
A + +V + G+++
Sbjct: 367 HAYVDVGNGLVNMYAKCGDIQ 387
>gi|357167614|ref|XP_003581249.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21300-like
[Brachypodium distachyon]
Length = 1430
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/588 (29%), Positives = 276/588 (46%), Gaps = 69/588 (11%)
Query: 31 KASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKS 90
K+ + + F LV YA LP AR +FD+ P + F +N+++ A+A R DA++
Sbjct: 788 KSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADARA 847
Query: 91 LFKN--------------------------LLRTQLKPDNF-----TYACITRACSENSD 119
LF L + D+F ++A AC+ D
Sbjct: 848 LFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEKD 907
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
VH S +D SAL+ Y+K +EA +VF+ + + ++V NS+I+
Sbjct: 908 SRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITC 967
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G ++L LF M++ G PDE TL ++S + G+ +H +KS
Sbjct: 968 YEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFRE 1027
Query: 240 DYV-SSVLVSMYARC------NC-------------------------MNSAYHVFNSLF 267
D V S+ LV MYA+C C + A VF+ +
Sbjct: 1028 DMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQMV 1087
Query: 268 HPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAV 327
+++ W+ LI Y+Q G+ +AL F +L + +VL A A++ G
Sbjct: 1088 EKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQQ 1147
Query: 328 IHGYVIQHGF------ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
H +V++ GF E V V ++LVDMY K G + G +VFE M+ R+ +++N++I+G
Sbjct: 1148 AHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIVG 1207
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G A F ++ +PD T +L AC H GLV +GR F MTE++GI
Sbjct: 1208 HAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGIIP 1267
Query: 442 KTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQL 501
+HY M+ LLG AG+L+E I + D + +LL C ++ N ++ E A +L
Sbjct: 1268 SQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLHKNVEMGEWAAGKL 1327
Query: 502 FENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
FE DPR V+LSN YAE G+W DV ++R + G+ K+ G SW+
Sbjct: 1328 FELDPRNSGPYVLLSNMYAELGKWADVFRVRSSMKHRGVSKQPGCSWI 1375
Score = 214 bits (544), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 153/540 (28%), Positives = 245/540 (45%), Gaps = 39/540 (7%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L ++LH +AK + T LV +Y +L AR FD + + WN I+R
Sbjct: 167 LCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIVRR 226
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y LA + A +F +L ++P +T + AC +N+ L R +H + G
Sbjct: 227 YHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYEHH 286
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF------------- 185
S++V Y+K +D A +F+ D+V+ S++SG A CG
Sbjct: 287 VHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGMKE 346
Query: 186 -----WDK-------------SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQG- 226
W+ +L LF M + + D TL ++S +L +G+G
Sbjct: 347 RNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSAC--TGILDIGKGE 404
Query: 227 -IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV--FNSLFHPDLVTWSALITGYSQ 283
+H F +K F S + + LV MY++C C+ SA + F D +W++LI+GY +
Sbjct: 405 EVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYER 464
Query: 284 QGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMV 343
ALY K+ + + +S LAA A + G IH Y+I+ G+E+ ++
Sbjct: 465 HSMSEAALYALTKMQSE-VTPNQSTFSSALAACANIFLLKQGMQIHAYMIRKGYEIDDIL 523
Query: 344 SSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL 403
S L+DMY KC I++FE R++I +NS+I G G + F ++ ++G+
Sbjct: 524 RSVLIDMYCKCRQFDYSIRIFEARPSRDVILWNSMIFGCAYSGKGEYGLDLFDEMQKQGI 583
Query: 404 NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAY 463
D TF L +C G V GR FT M +E I + EHY M++LLG G + E
Sbjct: 584 KADSVTFLGALVSCISEGHVRLGRSYFTLMMDE-SIIPRIEHYECMIELLGKHGCMVELE 642
Query: 464 SFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDG 523
F+ +P A+ + CC YGN L E A + +++P V + + DG
Sbjct: 643 DFVEHMPFEPTTAMWLRIFDCCREYGNRKLGERAAKCINDSNPLTPVQFVATVDYESNDG 702
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/472 (28%), Positives = 226/472 (47%), Gaps = 41/472 (8%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLR-------DPFYATKLVRLYALNNVLPSA 57
L+ +L L+ SH SLS + + +A +S F + + A + A
Sbjct: 45 LYASLLRLATSHGSLSAARRIATHLAASSSASSTSRSSVPTFLFNRAIESLAACGSVADA 104
Query: 58 RILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
R LFD P R WN+II A + A ++A SLF N+ ++P + T A + C+E
Sbjct: 105 RELFDLMPLRDGGSWNAIITASSRAGHPSEALSLFSNMNSLGIRPKDATMASVLSCCAEC 164
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
DL G R +HG + I +ALV Y L+ +A + FD + +P+ + N ++
Sbjct: 165 LDLCGARQLHGHIAKRDFQSNVILGTALVDVYGNCFLLADARRAFDDILEPNAISWNVIV 224
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
+ G D ++ +F ML G P YT+ + + + L G+ IH F L+ ++
Sbjct: 225 RRYHLAGMGDMAVDMFFRMLSAGVRPLGYTVSHAVLACRDNNALEEGRCIHAFVLRHGYE 284
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFN-------------------------------SL 266
+ +V S +V MYA+C M++A +FN +
Sbjct: 285 HHVHVRSSVVDMYAKCGAMDAAQSLFNLAPMKDMVMSTSIVSGLASCGRIADAKRVFEGM 344
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGA 326
+LV+W+A++TGY + D AL F+++ + ++ D + + SVL+A ++ G
Sbjct: 345 KERNLVSWNAMLTGYIRSMDLTGALLLFQQMRQETREFDAITLGSVLSACTGILDIGKGE 404
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYL--GLGIQVFETMSERNIITYNSVILGLGL 384
+H + I+ GF S ++ +ALV MYSKCG L + +FE SER+ ++NS+I G
Sbjct: 405 EVHAFAIKCGFFSSPILKNALVRMYSKCGCLRSAERLLLFEMGSERDSYSWNSLISGYER 464
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEE 436
H + A + ++ + P++STFS+ L AC + L+ G +I M +
Sbjct: 465 HSMSEAAL-YALTKMQSEVTPNQSTFSSALAACANIFLLKQGMQIHAYMIRK 515
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 187/408 (45%), Gaps = 43/408 (10%)
Query: 20 SRTK-ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
SRT ++HALV+K+ +D + + L+ +YA AR +F+ P+R++ WNS+I
Sbjct: 908 SRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLITC 967
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLPGLRFVHGGAIVSGLGR 137
Y +A LF ++++ PD T A + AC+ +D G R VH + S R
Sbjct: 968 YEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREG-RQVHARVVKSDRFR 1026
Query: 138 DS--------------------------------ITSSALVTAYSKLSLIDEAIKVFDGV 165
+ ++ ++L+T Y++ + +++A VF +
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARCVFDRMASRSVVSETSLITGYARSANVEDAQMVFSQM 1086
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ +++ N +I+ +A G +++L+LF + R P YT +++ + L +GQ
Sbjct: 1087 VEKNVIAWNVLIAAYAQNGEEEEALRLFVRLKRESVWPTHYTYGNVLNACGNVADLQLGQ 1146
Query: 226 GIHGFCLKSSF------DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
H LK F +S +V + LV MY + ++ VF + D V+W+A+I
Sbjct: 1147 QAHVHVLKEGFRFDFGPESDVFVGNSLVDMYLKTGSIDDGAKVFERMAARDNVSWNAMIV 1206
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFE 338
G++Q G AL+ F ++ + D V + VL+A S V G HG
Sbjct: 1207 GHAQNGRAKDALHLFERMLCSKESPDSVTMIGVLSACGHSGLVEEGRRYFRSMTEDHGII 1266
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLH 385
S + ++D+ + G+L ++ + MS E + + + S++ LH
Sbjct: 1267 PSQDHYTCMIDLLGRAGHLKEVEELIKEMSMEPDAVLWASLLGSCRLH 1314
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 148/331 (44%), Gaps = 35/331 (10%)
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
LKS F + ++ + LVS YAR + A VF+ + HP+ +++AL++ +++ G A
Sbjct: 787 LKSPFVAETFLLNTLVSAYARLGRLPDARRVFDEIPHPNTFSYNALLSAHARLGRPADAR 846
Query: 292 YYFRK---------------LNMQGKKADPVLI----------------ASVLAAAAKSA 320
F L + AD +L AS L+A A
Sbjct: 847 ALFHAIPDPDQCSYNAVIAALAQHSRGADALLFLAAMHADDFVLNAYSFASALSACAAEK 906
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
+ G +H V + V + SAL+DMY+KC + +VFE M ERNI+++NS+I
Sbjct: 907 DSRTGVQVHALVSKSPHAKDVYIGSALLDMYAKCEWPEEARRVFEAMPERNIVSWNSLIT 966
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
+G +A F +++ G PDE T ++++ AC +GR++ R+ + +
Sbjct: 967 CYEQNGPVGEALVLFVSMMKAGFVPDEVTLASVMSACAGLAADREGRQVHARVVKSDRFR 1026
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
+V + G A ++ +L++ N + A++V Q
Sbjct: 1027 EDMVLSNALVDMYAKCGRTRAARC-VFDRMASRSVVSETSLITGYARSANVEDAQMVFSQ 1085
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
+ E + A+ V+++ YA++G ++ ++L
Sbjct: 1086 MVEKNVI--AWNVLIA-AYAQNGEEEEALRL 1113
>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 872
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 156/531 (29%), Positives = 277/531 (52%), Gaps = 6/531 (1%)
Query: 21 RTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYA 80
R ++H +V K L + + L+ LY + ARILFDKT +SV WNS+I YA
Sbjct: 216 RGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYA 275
Query: 81 LAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
+A +F ++ ++ ++A I + C+ +L +H + G D
Sbjct: 276 ANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQN 335
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSD-PDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+AL+ AYSK + +A+++F ++V +MISGF ++++ LF M R
Sbjct: 336 IRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRK 395
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G P+E+T +++ L ++S + +H +K++++ V + L+ Y + ++ A
Sbjct: 396 GVRPNEFTYSVILTAL---PVISPSE-VHAQVVKTNYERSSTVGTALLDAYVKLGKVDEA 451
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL-AAAAK 318
VF+ + + D+V WSA++ GY+Q G+ A+ F +L G K + +S+L AA
Sbjct: 452 AKVFSGIDNKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAAT 511
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+A++ G HG+ I+ + S+ VSSAL+ MY+K G++ +VF+ E++++++NS+
Sbjct: 512 TASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSM 571
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I G HG +A + F+++ ++ + D TF + AC H GLV +G + F M +
Sbjct: 572 ISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCK 631
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I EH MV L AG LE+A I ++P + +L+ C ++ ++L + A
Sbjct: 632 IAPTKEHNSCMVDLYSRAGQLEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAA 691
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ P A V+LSN YAE G W + K+R + + ++KE G SW+
Sbjct: 692 EKIIAMIPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWI 742
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 190/398 (47%), Gaps = 9/398 (2%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
++LH K L D T LV Y + R +FD+ +R+V W ++I YA
Sbjct: 117 RQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTLISGYARN 176
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS-DLPGLRFVHGGAIVSGLGRDSIT 141
+ +LF + +P++FT+A +E GL+ VH + +GL +
Sbjct: 177 SLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ-VHTVVVKNGLDKTIPV 235
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
S++L+ Y K + +A +FD +V NSMISG+A G ++L +F + +RL
Sbjct: 236 SNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF-YSMRLNH 294
Query: 202 TP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
E + +I L + +H +K F + + L+ Y++C M A
Sbjct: 295 VRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCMAMLDAL 354
Query: 261 HVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
+F F ++V+W+A+I+G+ Q +A+ F ++ +G + + + +L A
Sbjct: 355 RLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKRKGVRPNEFTYSVILTALP-- 412
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
V + +H V++ +E S V +AL+D Y K G + +VF + ++I+ +++++
Sbjct: 413 --VISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAML 470
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G G T A + F ++ + G+ P+E TFS++L C
Sbjct: 471 AGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVC 508
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 179/379 (47%), Gaps = 8/379 (2%)
Query: 39 FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRT 98
F A RLY +N LFDK+P R + S++ ++ R +A LF N+
Sbjct: 39 FGAASSSRLYYAHN-------LFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHL 91
Query: 99 QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
++ D ++ + + + D R +H I G D ++LV Y K S +
Sbjct: 92 GMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDG 151
Query: 159 IKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEP 218
VFD + + ++V ++ISG+A ++ L LF M G P+ +T + L E
Sbjct: 152 RNVFDEMKERNVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEE 211
Query: 219 SLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALI 278
+ G +H +K+ D VS+ L+++Y +C + A +F+ +VTW+++I
Sbjct: 212 GVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMI 271
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
+GY+ G +AL F + + + AS++ A + +H V+++GF
Sbjct: 272 SGYAANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFV 331
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVF-ETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ +AL+ YSKC + +++F ET N++++ ++I G + +A F +
Sbjct: 332 FDQNIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSE 391
Query: 398 IIEKGLNPDESTFSALLCA 416
+ KG+ P+E T+S +L A
Sbjct: 392 MKRKGVRPNEFTYSVILTA 410
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 130/264 (49%), Gaps = 4/264 (1%)
Query: 158 AIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD--EYTLVGLISGL 215
A +FD D D S++ GF+ G ++ +LF + LG D ++ V +S
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
L G+ +H C+K F V + LV Y + + +VF+ + ++VTW+
Sbjct: 110 LCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWT 167
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
LI+GY++ + L F ++ +G + + A+ L A+ G +H V+++
Sbjct: 168 TLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKN 227
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
G + ++ VS++L+++Y KCG + +F+ ++++T+NS+I G +G +A F
Sbjct: 228 GLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMF 287
Query: 396 RDIIEKGLNPDESTFSALLCACCH 419
+ + ES+F++++ C +
Sbjct: 288 YSMRLNHVRLSESSFASIIKLCAN 311
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 85/173 (49%)
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A+++F+ D ++++L+ G+S+ G +A F + G + D + +SVL +A
Sbjct: 50 AHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSAT 109
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G +H I+ GF V V ++LVD Y K G VF+ M ERN++T+ ++
Sbjct: 110 LCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKERNVVTWTTL 169
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
I G + + F + ++G P+ TF+A L G+ G ++ T
Sbjct: 170 ISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHT 222
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ + K+ H K+ L ++ L+ +YA + SA +F + ++ + WNS+I
Sbjct: 514 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMIS 573
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG--- 134
YA + A +FK + + ++K D+ T+ + AC+ H G + G
Sbjct: 574 GYAQHGQAMKALDVFKEMKKRKVKMDSVTFIGVFAACT-----------HAGLVEEGEKY 622
Query: 135 ---LGRDSITS------SALVTAYSKLSLIDEAIKVFDGVSDPDL 170
+ RD + S +V YS+ +++A+KV D + P+L
Sbjct: 623 FDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIDNM--PNL 665
>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g13880-like [Vitis vinifera]
Length = 802
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 265/532 (49%), Gaps = 7/532 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HAL+ + L L+ +Y + AR++F+ + WNS+I Y
Sbjct: 142 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 201
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSEN--SDLPGLRFVHGGAIVSGLGRDSITS 142
++ L +LR L +++ +AC N S + + +HG A+ GL D +
Sbjct: 202 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 261
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG-----FWDKSLQLFDWML 197
+AL+ Y+K+ +++A K+F + DP++V+ N+MI+GF F ++++ LF M
Sbjct: 262 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 321
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P E+T ++ G+ IH K + S +++ + LV +Y+ +
Sbjct: 322 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 381
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
F+S D+V+W++LI G+ Q G + L F +L G+K D I+ +L+A A
Sbjct: 382 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 441
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A V G IH Y I+ G ++ ++ + MY+KCG + F+ +I++++
Sbjct: 442 NLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSV 501
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I HG +A + F + G+ P+ TF +L AC HGGLV +G F M +++
Sbjct: 502 MISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDH 561
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI +H +V LLG AG L EA SFI DP + +LLS C ++ +D + V
Sbjct: 562 GITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRV 621
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++ E +P A V+L N Y + G ++R+ + D G++KE G+SW+
Sbjct: 622 AERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWI 673
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 207/434 (47%), Gaps = 21/434 (4%)
Query: 13 SKSHQSLSRTKEL-HALVAKASLLRDPFYATKLVRLYALNNVL---------PSARILFD 62
+K Q +RT L H +A +++ F L+ LNN+L A+ LFD
Sbjct: 23 TKLVQCSTRTGSLIHGKLAHMHMIKTCFKPC----LFLLNNLLYMYCKCGETDVAKKLFD 78
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P+R+V WNS+I Y +++ +LFK + L+ D FT++ C DL
Sbjct: 79 RMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRL 138
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R +H VSGLG + +++L+ Y K ID A VF+ + D V NS+I+G+
Sbjct: 139 GRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVR 198
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE--PSLLSVGQGIHGFCLKSSFDSYD 240
G D+ L+L MLR G + Y L + S + G+ +HG +K D
Sbjct: 199 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDV 258
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-----KALYYFR 295
V + L+ YA+ + A +F + P++V ++A+I G+ Q +A+Y F
Sbjct: 259 VVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFF 318
Query: 296 KLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCG 355
++ +G K +S+L A + G IH + ++ + + +ALV++YS G
Sbjct: 319 EMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSG 378
Query: 356 YLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLC 415
+ G++ F + + +++++ S+I+G +G F +++ G PDE T S +L
Sbjct: 379 SIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLS 438
Query: 416 ACCHGGLVNDGREI 429
AC + V G +I
Sbjct: 439 ACANLAAVKSGEQI 452
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 16/291 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + ++ K++HA + K +L D F LV LY+L+ + F TP+
Sbjct: 335 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLD 394
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W S+I + +F +LF LL + KPD FT + + AC+ + + +H
Sbjct: 395 VVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHA 454
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI +G+G +I ++ + Y+K ID A F +PD+V + MIS A G +
Sbjct: 455 YAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKE 514
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSL--LSVGQGIHGFCLKSSFDSYDY 241
++ LF+ M G P+ T +G++ GL E L + + HG
Sbjct: 515 AVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKH----- 569
Query: 242 VSSVLVSMYARCNCMNSAYH-VFNSLFHPDLVTWSALITG--YSQQGDYGK 289
S+ +V + R + A + +S F D V W +L++ + D GK
Sbjct: 570 -SACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 619
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%)
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
LG D T L+ L G+ H +K+ F ++ + L+ MY +C +
Sbjct: 13 LGLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDV 72
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +F+ + ++V+W++LI+GY+Q G Y + + F++ M + D ++ L+ +
Sbjct: 73 AKKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGR 132
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ ++ G +IH + G V+++++L+DMY KCG + VFE+ E + +++NS+
Sbjct: 133 TLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSL 192
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
I G G + ++ GLN + + L AC
Sbjct: 193 IAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKAC 231
>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
Length = 738
Score = 260 bits (664), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 165/576 (28%), Positives = 294/576 (51%), Gaps = 38/576 (6%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALN--NVLPSARILFDKTPQR 67
L L + ++++ K++H+L+ K L F +KL+ A++ L A LF++ Q
Sbjct: 32 LNLLEKCKNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQH 91
Query: 68 ---SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
+VF+WNS+IR Y+L+ + LF +L ++P++ T+ + ++C++ +
Sbjct: 92 HKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGK 151
Query: 125 FVHGGAIVSGLG-------------------------------RDSITSSALVTAYSKLS 153
+H A+ L RD+++ +AL+T Y
Sbjct: 152 QLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQG 211
Query: 154 LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLIS 213
+D+A ++FD + D+V N+MISG+ G +++++ F M P++ T+V ++S
Sbjct: 212 CLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLS 271
Query: 214 GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT 273
+G+ I + + F S +++ L+ MY +C + A +F+ + D+++
Sbjct: 272 ACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVIS 331
Query: 274 WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVI 333
W+ +I GYS Y +AL F + K + V +L A A + G +H Y+
Sbjct: 332 WNTMIGGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYID 391
Query: 334 QHGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAF 392
++ S + ++L+DMY+KCG + +VF +M RN+ ++N+++ G +HG +A
Sbjct: 392 KNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERAL 451
Query: 393 EFFRDIIEKGL-NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
F +++ KGL PD+ TF +L AC GLV+ G + F M ++YGI K +HY M+
Sbjct: 452 ALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMID 511
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAY 511
LL A EEA + ++ D A+ G+LLS C +G + E VA +LF+ +P
Sbjct: 512 LLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGA 571
Query: 512 KVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
V+LSN YA GRWDDV ++R + D G++K G +
Sbjct: 572 FVLLSNIYAGAGRWDDVARIRTRLNDKGMKKVPGCT 607
>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/539 (30%), Positives = 274/539 (50%), Gaps = 10/539 (1%)
Query: 20 SRTKELHALVAKASLLRDP--FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ LH L + P F L+ YA ++++ AR +FD+ PQ + +N++I
Sbjct: 55 SKCGSLHNAQTSFDLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIA 114
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AYA A LF + + D FT + + AC ++ L +R +H +V G
Sbjct: 115 AYADRGECRPALRLFAEVRELRFGLDGFTLSGVIIACGDDVGL--VRQLHCFVVVCGYDC 172
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSD---PDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ ++A++ YS+ ++EA +VF + + D V N+MI ++++LF
Sbjct: 173 YASVNNAVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFR 232
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC- 253
M+R G D +T+ +++ L G HG +KS F +V S L+ +Y++C
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPVLIASV 312
M VF + PDLV W+ +I+G+SQ D + ++ FR++ G D V
Sbjct: 293 GGMVECRKVFEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCV 352
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
+A + ++ G +H I+ + V V++ALV MYSKCG + +VF+TM E N
Sbjct: 353 TSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHN 412
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
+++ NS+I G HG ++ F +++K + P+ TF A+L AC H G V +G++ F
Sbjct: 413 MVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFN 472
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M E + I+ + EHY M+ LLG AG L+EA I ++P LL C +GN
Sbjct: 473 MMKERFRIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNV 532
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+LA A++ + +P A VMLSN YA RW++ ++ + + G++K+ G SW+
Sbjct: 533 ELAVKAANEFLQLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIE 591
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 4/125 (3%)
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
++L A ++ G +H + S +S+ +YSKCG L F+
Sbjct: 14 NLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFDLTQYP 73
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
N+ +YN++I H + A + F +I + PD +++ L+ A G +F
Sbjct: 74 NVFSYNTLINAYAKHSLIHLARQVFDEIPQ----PDIVSYNTLIAAYADRGECRPALRLF 129
Query: 431 TRMTE 435
+ E
Sbjct: 130 AEVRE 134
>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
Length = 886
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 281/591 (47%), Gaps = 62/591 (10%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR---SVFLWNSIIRAY 79
+ LH L+ + F LV +Y+ L A ++FD+ ++ V WNSI+ A+
Sbjct: 169 RALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAH 228
Query: 80 ALAHRFNDAKSLFKNL------LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVS 133
A LF + T + D + I AC+ LP ++ +H AI +
Sbjct: 229 VKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRN 288
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
G D+ +AL+ Y+K +++A+KVF+ + D+V N+M++G+ G + + +LF
Sbjct: 289 GTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELF 348
Query: 194 D-------------W----------------------MLRLGKTPDEYTLVGLISGLWEP 218
+ W M+ G P+ T++ L+S
Sbjct: 349 ENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASL 408
Query: 219 SLLSVGQGIHGFCLKSSFDSYD------------YVSSVLVSMYARCNCMNSAYHVFNSL 266
LS G IH + LK S D V + L+ MY++C +A +F+S+
Sbjct: 409 GALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSI 468
Query: 267 --FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSANV 322
++VTW+ +I GY+Q GD AL F ++ + P I+ +L A A A +
Sbjct: 469 PRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAAL 528
Query: 323 WPGAVIHGYVIQH-GFELSV-MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G IH YV +H +E SV V++ L+DMYSKCG + VF++M +RN +++ S++
Sbjct: 529 RMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMS 588
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G G+HG +A + F + + G PD+ +F LL AC H G+V+ G F M +Y +
Sbjct: 589 GYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVV 648
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
A EHY ++ LL G L++A+ I +P + ALLS C ++ N +LAE ++
Sbjct: 649 ASAEHYACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNK 708
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
L ++SN YA RW DV ++R + +G++K G SWV G
Sbjct: 709 LVNMKAENDGSYTLISNIYANARRWKDVARIRQLMKKSGIKKRPGCSWVQG 759
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 216/478 (45%), Gaps = 70/478 (14%)
Query: 59 ILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
+L TP +V+ WN ++R + + A + +LR KPD+FT +AC E
Sbjct: 105 VLERVTPSPAVW-WNLLVREHIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELP 163
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDP---DLVLCNS 175
R +HG +G + +ALV YS+ +++A VFD ++ D++ NS
Sbjct: 164 SYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNS 223
Query: 176 MISGFAHCGFWDKSLQLFDWMLRL------GKTPDEYTLVGLISGLWEPSLLSVGQGIHG 229
+++ +L+LF M + + D ++V ++ L + IH
Sbjct: 224 IVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHS 283
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG- 288
+ +++ + +V + L+ YA+C MN A VFN + D+V+W+A++TGY+Q G++G
Sbjct: 284 YAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGA 343
Query: 289 ----------------------------------KALYYFRKLNMQGKKADPVLIASVLA 314
+AL F+++ + G + + V I S+L+
Sbjct: 344 AFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLS 403
Query: 315 AAAKSANVWPGAVIHGYVIQHGF------------ELSVMVSSALVDMYSKCGYLGLGIQ 362
A A + G IH Y ++ +MV +AL+DMYSKC
Sbjct: 404 ACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARS 463
Query: 363 VFETMS--ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK--GLNPDESTFSALLCACC 418
+F+++ ERN++T+ +I G +G + A + F ++I K + P+ T S +L AC
Sbjct: 464 IFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACA 523
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIY-----MVKLLGLAGNLEEAYSFIWSLPK 471
H + G++I +T + + E +Y ++ + G+++ A + S+PK
Sbjct: 524 HLAALRMGKQIHAYVTRHH----EYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPK 577
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 148/300 (49%), Gaps = 9/300 (3%)
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ +V +Y +A+ V + V+ V N ++ G D+++ + MLR G
Sbjct: 87 TGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIGVSCRMLRAGTK 146
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PD +TL + E G+ +HG + F+S +V + LV+MY+RC + A V
Sbjct: 147 PDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYSRCGSLEDASLV 206
Query: 263 FNSLFHP---DLVTWSALITGYSQQGDYGKALYYFRKLNM------QGKKADPVLIASVL 313
F+ + D+++W++++ + + + AL F +++M +++D + I ++L
Sbjct: 207 FDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNERSDIISIVNIL 266
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A A + IH Y I++G V +AL+D Y+KCG + ++VF M ++++
Sbjct: 267 PACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKDVV 326
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
++N+++ G G AFE F ++ ++ + D T+SA++ G + + F +M
Sbjct: 327 SWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQQM 386
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 180/414 (43%), Gaps = 56/414 (13%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L S ++L + KE+H+ + D F L+ YA + A +F+ +
Sbjct: 265 ILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKCGSMNDAVKVFNVMEFKD 324
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACI-----TRACSENS-DLPG 122
V WN+++ Y + F A LF+N+ + + D T++ + R CS+ + D
Sbjct: 325 VVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAVIAGYAQRGCSQEALDAFQ 384
Query: 123 LRFVHG------------------GAIVSGLGRDS-----------------------IT 141
+ G GA+ G+ + +
Sbjct: 385 QMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCLLSLDNDFGGDGDGEDLMV 444
Query: 142 SSALVTAYSKLSLIDEAIKVFDGVS--DPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR- 198
+AL+ YSK A +FD + + ++V MI G+A G + +L++F M+
Sbjct: 445 YNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYAQYGDSNDALKIFSEMISK 504
Query: 199 -LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS--FDSYDYVSSVLVSMYARCNC 255
P+ YT+ ++ + L +G+ IH + + S +V++ L+ MY++C
Sbjct: 505 PYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEPSVYFVANCLIDMYSKCGD 564
Query: 256 MNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA 315
+++A +VF+S+ + V+W+++++GY G +AL F K+ G D + +L A
Sbjct: 565 VDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYA 624
Query: 316 AAKSANVWPGAVIHGYVIQHGFEL--SVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ S V G + + +++ +++ S + ++D+ ++CG L + + M
Sbjct: 625 CSHSGMVDQG-LNYFDIMRRDYDVVASAEHYACVIDLLARCGRLDKAWKTIQEM 677
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 87/194 (44%), Gaps = 14/194 (7%)
Query: 238 SYDYVS-----SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
S+ YVS + +V+ Y C A V + V W+ L+ + ++G +A+
Sbjct: 76 SHSYVSPKSLGTGVVASYLACGATKDALSVLERVTPSPAVWWNLLVREHIKEGHLDRAIG 135
Query: 293 YFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYS 352
++ G K D + L A + + G +HG + +GFE +V V +ALV MYS
Sbjct: 136 VSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESNVFVCNALVAMYS 195
Query: 353 KCGYLGLGIQVFETMSER---NIITYNSVILGLGLHGFTYQAFEFFRD----IIEKGLNP 405
+CG L VF+ ++ + ++I++NS++ A E F + + EK N
Sbjct: 196 RCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVHEKATNE 255
Query: 406 DESTFSA--LLCAC 417
S +L AC
Sbjct: 256 RSDIISIVNILPAC 269
>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/532 (28%), Positives = 265/532 (49%), Gaps = 7/532 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HAL+ + L L+ +Y + AR++F+ + WNS+I Y
Sbjct: 63 IHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIGS 122
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSEN--SDLPGLRFVHGGAIVSGLGRDSITS 142
++ L +LR L +++ +AC N S + + +HG A+ GL D +
Sbjct: 123 NDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVVG 182
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG-----FWDKSLQLFDWML 197
+AL+ Y+K+ +++A K+F + DP++V+ N+MI+GF F ++++ LF M
Sbjct: 183 TALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEMQ 242
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
G P E+T ++ G+ IH K + S +++ + LV +Y+ +
Sbjct: 243 SRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIE 302
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
F+S D+V+W++LI G+ Q G + L F +L G+K D I+ +L+A A
Sbjct: 303 DGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACA 362
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A V G IH Y I+ G ++ ++ + MY+KCG + F+ +I++++
Sbjct: 363 NLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSV 422
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I HG +A + F + G+ P+ TF +L AC HGGLV +G F M +++
Sbjct: 423 MISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDH 482
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI +H +V LLG AG L EA SFI DP + +LLS C ++ +D + V
Sbjct: 483 GITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGKRV 542
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
A ++ E +P A V+L N Y + G ++R+ + D G++KE G+SW+
Sbjct: 543 AERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWI 594
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 180/372 (48%), Gaps = 7/372 (1%)
Query: 65 PQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
P+R+V WNS+I Y +++ +LFK + L+ D FT++ C DL R
Sbjct: 2 PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGR 61
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H VSGLG + +++L+ Y K ID A VF+ + D V NS+I+G+ G
Sbjct: 62 LIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFESADELDSVSWNSLIAGYVRIG 121
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE--PSLLSVGQGIHGFCLKSSFDSYDYV 242
D+ L+L MLR G + Y L + S + G+ +HG +K D V
Sbjct: 122 SNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLDLDVVV 181
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-----KALYYFRKL 297
+ L+ YA+ + A +F + P++V ++A+I G+ Q +A+Y F ++
Sbjct: 182 GTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMYLFFEM 241
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
+G K +S+L A + G IH + ++ + + +ALV++YS G +
Sbjct: 242 QSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSI 301
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
G++ F + + +++++ S+I+G +G F +++ G PDE T S +L AC
Sbjct: 302 EDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSAC 361
Query: 418 CHGGLVNDGREI 429
+ V G +I
Sbjct: 362 ANLAAVKSGEQI 373
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 132/291 (45%), Gaps = 16/291 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + ++ K++HA + K +L D F LV LY+L+ + F TP+
Sbjct: 256 ILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYSLSGSIEDGLKCFHSTPKLD 315
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W S+I + +F +LF LL + KPD FT + + AC+ + + +H
Sbjct: 316 VVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHA 375
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
AI +G+G +I ++ + Y+K ID A F +PD+V + MIS A G +
Sbjct: 376 YAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKE 435
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLI-----SGLWEPSL--LSVGQGIHGFCLKSSFDSYDY 241
++ LF+ M G P+ T +G++ GL E L + + HG
Sbjct: 436 AVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKH----- 490
Query: 242 VSSVLVSMYARCNCMNSAYH-VFNSLFHPDLVTWSALITG--YSQQGDYGK 289
S+ +V + R + A + +S F D V W +L++ + D GK
Sbjct: 491 -SACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHKATDTGK 540
>gi|147804811|emb|CAN64701.1| hypothetical protein VITISV_037299 [Vitis vinifera]
Length = 1111
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/525 (30%), Positives = 271/525 (51%), Gaps = 2/525 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH LV K + + L+ +Y+ A F + + + W S+I AY+
Sbjct: 589 LHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWTSMISAYSRMGW 648
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
+ +F +L + + PD +C+ + S + + + HG I D + +A
Sbjct: 649 ATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRRHYTLDQMVQNA 708
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L++ Y K + A K F V++ + N M+SG+ G K + LF M LG D
Sbjct: 709 LLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLFREMQCLGIESD 768
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+LV ++S + + + IH + +K+ D V++ L+ MY + + A +F
Sbjct: 769 SNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVNNSLIDMYGKSGNLTIARRIFC 828
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ D+VTW+ LI+ Y+ G + +AL + K+ ++ K + + VL+A + A++
Sbjct: 829 RIPR-DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLKPNSATLVXVLSACSHLASLEE 887
Query: 325 GAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGL 384
G +H Y+ FE ++ +++AL+DMY+KCG L ++F +M ER++IT+N +I G G+
Sbjct: 888 GEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMISGYGM 947
Query: 385 HGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTE 444
HG A E F+ + E P+ TF A+L AC H GLV +G+ +F +M ++Y + +
Sbjct: 948 HGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLVKEGKYLFGKM-QDYSVAPNLK 1006
Query: 445 HYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFEN 504
HY MV LLG +GNL+EA + + S+P D V GALLS C I+ ++ +A +
Sbjct: 1007 HYACMVDLLGRSGNLQEAEALVLSMPISPDGGVWGALLSSCKIHNEIEMGIRIAKHAIXS 1066
Query: 505 DPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
D Y VM+SN Y+ G+W++ K R + + G+RK+ G S V
Sbjct: 1067 DVENDGYYVMISNMYSSIGKWEEAEKARGIMKERGVRKKTGWSAV 1111
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIK 160
+P+ T +AC L R +HG + +G+ + S+L++ YSK +EA +
Sbjct: 564 RPNFRTLEGGFQACGNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHR 623
Query: 161 VFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL 220
F V + D++ SMIS ++ G+ + + +F ML G PD + ++S
Sbjct: 624 SFCEVLNKDIISWTSMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMR 683
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
+ + HG ++ + V + L+SMY + + A F + + W+ +++G
Sbjct: 684 VFEAKAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSG 743
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELS 340
Y + G K + FR++ G ++D + SV+++ ++ IH Y+I++ + +
Sbjct: 744 YGKIGLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDEN 803
Query: 341 VMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
V V+++L+DMY K G L + ++F + R+I+T+N++I G +A + ++
Sbjct: 804 VSVNNSLIDMYGKSGNLTIARRIFCRIP-RDIVTWNTLISSYAHCGHFAEALSLYDKMVL 862
Query: 401 KGLNPDESTFSALLCACCHGGLVNDGREI 429
+ L P+ +T +L AC H + +G ++
Sbjct: 863 EDLKPNSATLVXVLSACSHLASLEEGEKV 891
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 157/335 (46%), Gaps = 1/335 (0%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K H L+ + D L+ +Y L A F + +++ WN ++ Y
Sbjct: 688 KAFHGLIIRRHYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKI 747
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
LF+ + ++ D+ + + +CS+ R +H I + + + +
Sbjct: 748 GLIMKCIGLFREMQCLGIESDSNSLVSVVSSCSQLGATHLARSIHCYMIKNLMDENVSVN 807
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y K + A ++F + D+V N++IS +AHCG + ++L L+D M+
Sbjct: 808 NSLIDMYGKSGNLTIARRIFCRIPR-DIVTWNTLISSYAHCGHFAEALSLYDKMVLEDLK 866
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P+ TLV ++S + L G+ +H + F+ +++ L+ MYA+C + + +
Sbjct: 867 PNSATLVXVLSACSHLASLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREI 926
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
FNS+ D++TW+ +I+GY GD A+ F+++ K + + +VL+A A + V
Sbjct: 927 FNSMHERDVITWNVMISGYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACAHAGLV 986
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + G + + ++ + +VD+ + G L
Sbjct: 987 KEGKYLFGKMQDYSVAPNLKHYACMVDLLGRSGNL 1021
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 119/243 (48%), Gaps = 17/243 (6%)
Query: 167 DPDLVLCNSMISGFAHCGFWDK--------SLQLFDWMLRLG---KTPDEYTLVGLISGL 215
DP L +C + FW + L+ M R+G + P+ TL G
Sbjct: 524 DPLLCIC------IRNVEFWRRHMNGESKMGLECLCEMHRIGGDGERPNFRTLEGGFQAC 577
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
L G+ +HG +K+ D V S L+SMY++C A+ F + + D+++W+
Sbjct: 578 GNLGALLEGRCLHGLVVKTGMDYSQVVQSSLLSMYSKCGNPEEAHRSFCEVLNKDIISWT 637
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
++I+ YS+ G + + F ++ + G D ++I+ +L++ + S V+ HG +I+
Sbjct: 638 SMISAYSRMGWATECIDMFWEMLVSGIYPDGIVISCMLSSFSNSMRVFEAKAFHGLIIRR 697
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
+ L MV +AL+ MY K G+L L + F ++E+N +N ++ G G G + F
Sbjct: 698 HYTLDQMVQNALLSMYCKFGFLKLAEKFFGRVNEQNFEAWNLMVSGYGKIGLIMKCIGLF 757
Query: 396 RDI 398
R++
Sbjct: 758 REM 760
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 127/339 (37%), Gaps = 30/339 (8%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQ----RSVFLWNSIIRAYALAHRFNDAKSLFKNLLR 97
T L+ Y N V A L +K + + +N +I Y + + + L +
Sbjct: 161 TALLHTYVQNKVSEKAEALMEKMSECGFLKCPLPYNHMISLYISDGQLEKVPGMIQEL-K 219
Query: 98 TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDE 157
PD TY C+ +D+ V + + D +T S+L Y K L+D+
Sbjct: 220 KNTSPDVVTYNLWLTVCASQNDVETAEKVLLEIKKAKIDPDWVTYSSLTNLYIKKGLLDK 279
Query: 158 AIKVFDGV----SDPDLVLCNSMISGFAHCG-------FWDKSLQLFDWMLRLGKTPDEY 206
A + + S + +S+IS + W K +F M EY
Sbjct: 280 AATTLNEMEKRTSRKGRIAYSSLISLHTNMQDKDGVHRIWKKLKSIFHKM-----NDAEY 334
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
T +IS L + + ++ S V ++L++ Y N M A +N +
Sbjct: 335 TC--MISSLVKLGEFEEAENLYSEWTSVSPTGDSRVPNILLAAYINKNEMEMAEKFYNQM 392
Query: 267 FH----PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP--VLIASVLAAAAKSA 320
P TW L GY ++ K L YF K KK +P L+ V +
Sbjct: 393 VERGITPSYTTWELLTWGYLKKKQMEKVLDYFEKAVGSVKKWNPDEKLVREVYKNLEEQG 452
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
N+ GA +++ +S + + L+ Y+K G + L
Sbjct: 453 NI-EGAEKVLVILRKAGHVSTEIYNWLLRAYAKAGKMPL 490
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 44/98 (44%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL +++H + + AT L+ +YA L +R +F+ +R V WN +I
Sbjct: 884 SLEEGEKVHNYINGGKFEFNLSIATALIDMYAKCGQLEKSREIFNSMHERDVITWNVMIS 943
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
Y + A F+ + + KP+ T+ + AC+
Sbjct: 944 GYGMHGDARSAIEXFQQMEESSAKPNGLTFLAVLSACA 981
>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g68930
gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 164/595 (27%), Positives = 271/595 (45%), Gaps = 72/595 (12%)
Query: 22 TKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYAL 81
K +H + +A + F +V YAL AR +FD+ PQ ++F WN+++ AY+
Sbjct: 25 VKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSK 84
Query: 82 AHRFNDAKSLFKNL--------------------LRTQLKPDN------------FTYAC 109
A ++ +S F+ L + +K N T
Sbjct: 85 AGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMT 144
Query: 110 ITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPD 169
+ + S N + + +HG I G + S L+ Y+ + I +A KVF G+ D +
Sbjct: 145 MLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRN 204
Query: 170 LVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSL--------- 220
V+ NS++ G CG + +LQLF G D + +I GL + L
Sbjct: 205 TVMYNSLMGGLLACGMIEDALQLFR-----GMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 221 --------------------------LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
++ G+ IH ++++F + YV S L+ MY +C
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
C++ A VF+ + ++V+W+A++ GY Q G +A+ F + G D + ++
Sbjct: 320 CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A +++ G+ HG I G V VS++LV +Y KCG + ++F M+ R+ ++
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVS 439
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+ +++ G + + F +++ GL PD T + ++ AC GLV G+ F MT
Sbjct: 440 WTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMT 499
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
EYGI HY M+ L +G LEEA FI +P P D LLS C GN ++
Sbjct: 500 SEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIG 559
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ A L E DP A +LS+ YA G+WD V +LR + + ++KE G SW+
Sbjct: 560 KWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWI 614
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 140/275 (50%), Gaps = 10/275 (3%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+++ K++HA + + + + + L+ +Y L A+ +FD+ Q++V W +++
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
Y R +A +F ++ R+ + PD++T AC+ S L HG AI SGL
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIH 404
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
S++LVT Y K ID++ ++F+ ++ D V +M+S +A G +++QLFD M+
Sbjct: 405 YVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMV 464
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV-----LVSMYAR 252
+ G PD TL G+IS L+ GQ F L +S Y V S+ ++ +++R
Sbjct: 465 QHGLKPDGVTLTGVISACSRAGLVEKGQ--RYFKLMTS--EYGIVPSIGHYSCMIDLFSR 520
Query: 253 CNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
+ A N + F PD + W+ L++ +G+
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGN 555
>gi|15232344|ref|NP_188709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|38564272|gb|AAR23715.1| At3g20730 [Arabidopsis thaliana]
gi|332642896|gb|AEE76417.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 564
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 256/500 (51%), Gaps = 4/500 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ LY + AR LFD+ +R V W ++I ++ DA LFK + R +K +
Sbjct: 53 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 112
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FTY + ++C + L +HG + I SAL++ Y++ ++EA FD
Sbjct: 113 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 172
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ + DLV N+MI G+ D S LF ML GK PD +T L+ L +
Sbjct: 173 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 232
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
+HG +K F + LV+ Y +C + +A+ + DL++ +ALITG+SQ
Sbjct: 233 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 292
Query: 284 QGD-YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSV 341
Q + A F+ + K D V+++S+L A+V G IHG+ ++ V
Sbjct: 293 QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDV 352
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+ ++L+DMY+K G + + FE M E+++ ++ S+I G G HG +A + + + +
Sbjct: 353 ALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 412
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
+ P++ TF +LL AC H G G +I+ M ++GI+A+ EH ++ +L +G LEE
Sbjct: 413 RIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEE 472
Query: 462 AYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
AY+ I S V + S GA L C +GN L+++ A QL +PRK + L++ Y
Sbjct: 473 AYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVY 532
Query: 520 AEDGRWDDVMKLRDDIVDNG 539
A +G WD+ + R + ++G
Sbjct: 533 AANGAWDNALNTRKLMKESG 552
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 3/352 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ K L ++H V K + + + L+ LYA + AR+ FD +R
Sbjct: 119 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 178
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I Y + + SLF+ +L KPD FT+ + RA L + +HG
Sbjct: 179 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 238
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGFWD 187
AI G GR S +LV AY K + A K+ +G DL+ C ++I+GF+
Sbjct: 239 LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS 298
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVL 246
+ +F M+R+ DE + ++ + +++G+ IHGF LKSS +D + + L
Sbjct: 299 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 358
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+ + A F + D+ +W++LI GY + G++ KA+ + ++ + K +
Sbjct: 359 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 418
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYL 357
V S+L+A + + G I+ +I +HG E S ++DM ++ GYL
Sbjct: 419 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 470
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 153/319 (47%), Gaps = 1/319 (0%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
+ CS + L +HG +I +G + L+ Y K + A K+FD +S D+V
Sbjct: 20 KLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVV 79
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
+MIS F+ CG+ +L LF M R +++T ++ + L G IHG
Sbjct: 80 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 139
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
K + V S L+S+YARC M A F+S+ DLV+W+A+I GY+ +
Sbjct: 140 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 199
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F+ + +GKK D S+L A+ + + +HG I+ GF S + +LV+ Y
Sbjct: 200 SLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAY 259
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLH-GFTYQAFEFFRDIIEKGLNPDESTF 410
KCG L ++ E +R++++ ++I G T AF+ F+D+I DE
Sbjct: 260 VKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVV 319
Query: 411 SALLCACCHGGLVNDGREI 429
S++L C V GR+I
Sbjct: 320 SSMLKICTTIASVTIGRQI 338
>gi|255577487|ref|XP_002529622.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530907|gb|EEF32767.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 752
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/551 (28%), Positives = 279/551 (50%), Gaps = 4/551 (0%)
Query: 3 FNLHF--LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARIL 60
FN H ++L+ S +++H V K+ + F T L+ +Y + A +
Sbjct: 166 FNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVGTSLIAMYTKSGFFDVAEKV 225
Query: 61 FDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL 120
FD + + N +I Y A A +FKNLL +P ++T+ I C+ + +
Sbjct: 226 FDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFEPTDYTFTNIISTCNGDLGV 285
Query: 121 PGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGF 180
+ + G A G ++ +A++T Y + EA ++F +S+ +L+ ++ISG+
Sbjct: 286 EEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERMFSSMSEKNLISWTALISGY 345
Query: 181 AHCGFWDKSLQLFDWML-RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ G+ K++ F + LG D L ++ + + L +G IHGF +K
Sbjct: 346 SRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNNLELGLQIHGFVMKLGCACD 405
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGY-SQQGDYGKALYYFRKLN 298
V++ LV +YA+C + SA VF+ L + + +++A++ G+ GD + F +L
Sbjct: 406 VNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAGFLESSGDEEDPMILFNQLR 465
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+ G K D V + +L+ A A++ G H Y ++ GF+ ++ V+++++ MY+KCG +
Sbjct: 466 LAGVKPDMVTFSRLLSLLANQASLEKGRSFHAYTVKTGFDTNISVANSVISMYAKCGSIE 525
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
Q+F M+ R+ I++N++I LHG ++ F ++ KG +PDE T A+L AC
Sbjct: 526 DAHQMFNIMNCRDSISWNALISAYALHGQAQKSLFLFEEMKRKGFDPDEFTILAILQACT 585
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
+ GL DG +F M +YGI+ EHY M LLG AG L EA I P P +
Sbjct: 586 YSGLWKDGICLFNLMEPKYGIKPLLEHYACMADLLGRAGYLSEAMDIIKRSPFPKSTLLW 645
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
L++ C ++GN + ++ + L + P + +++SN YA + D+ K+R + D
Sbjct: 646 RTLVNVCKLHGNLNFGKLASKHLLDLSPVEAGSYILVSNMYASEKMSDEAAKVRKVMNDL 705
Query: 539 GLRKEAGVSWV 549
RKEAG SW+
Sbjct: 706 KFRKEAGSSWI 716
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 229/489 (46%), Gaps = 8/489 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
+ +H+ + KA D F ++ LY N L A+ +FD+ R+ W S+I+ Y
Sbjct: 87 QAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYLED 146
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ F A S+ ++ + + T I +ACS D +H I SG +
Sbjct: 147 NDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVFVG 206
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
++L+ Y+K D A KVFD + D+ N MI + G K++++F +L G
Sbjct: 207 TSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDGFE 266
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P +YT +IS + G+ + G K F S V + +++MY A +
Sbjct: 267 PTDYTFTNIISTCNGDLGVEEGKQLQGLAFKYGFLSETSVGNAIITMYGNSGMPKEAERM 326
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ-GKKADPVLIASVLAAAAKSAN 321
F+S+ +L++W+ALI+GYS+ G KA+ F L+ + G D L+ ++L + N
Sbjct: 327 FSSMSEKNLISWTALISGYSRSGYGKKAVDAFLGLHDELGINFDSTLLTAILDCCSDCNN 386
Query: 322 VWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G IHG+V++ G V V++ALVD+Y+KC L VF+ +S + I ++N+++ G
Sbjct: 387 LELGLQIHGFVMKLGCACDVNVATALVDLYAKCEKLQSARIVFDHLSNKGIASFNAILAG 446
Query: 382 -LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
L G F + G+ PD TFS LL + + GR F T + G
Sbjct: 447 FLESSGDEEDPMILFNQLRLAGVKPDMVTFSRLLSLLANQASLEKGRS-FHAYTVKTGFD 505
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
++ + G++E+A+ ++++ D AL+S ++G + +
Sbjct: 506 TNISVANSVISMYAKCGSIEDAHQ-MFNIMNCRDSISWNALISAYALHGQAQKSLF---- 560
Query: 501 LFENDPRKG 509
LFE RKG
Sbjct: 561 LFEEMKRKG 569
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 134/250 (53%), Gaps = 3/250 (1%)
Query: 223 VGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+GQ +H + +K+ + + ++++Y + N ++ A VF+ + + +TW++LI GY
Sbjct: 85 LGQAVHSYLVKAGSQDDTFKGNNVLNLYVKFNRLDLAQKVFDRMRTRNTITWTSLIKGYL 144
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVM 342
+ D+ A ++ G+ + +L A + + G IH +VI+ GF+ +V
Sbjct: 145 EDNDFQSAFSIAGDMHKFGENFNEHTCTVILQACSSPDDRILGEQIHCFVIKSGFDENVF 204
Query: 343 VSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG 402
V ++L+ MY+K G+ + +VF++M ++I N +IL G G +A E F++++ G
Sbjct: 205 VGTSLIAMYTKSGFFDVAEKVFDSMGFKDIRCLNFMILEYGRAGNGGKAIEVFKNLLNDG 264
Query: 403 LNPDESTFSALLCACCHGGL-VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
P + TF+ ++ + C+G L V +G+++ + +YG ++T ++ + G +G +E
Sbjct: 265 FEPTDYTFTNII-STCNGDLGVEEGKQL-QGLAFKYGFLSETSVGNAIITMYGNSGMPKE 322
Query: 462 AYSFIWSLPK 471
A S+ +
Sbjct: 323 AERMFSSMSE 332
>gi|225216917|gb|ACN85213.1| EMB2261 putative [Oryza glaberrima]
Length = 615
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 167/533 (31%), Positives = 264/533 (49%), Gaps = 7/533 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LH A+A LL D + A L+ Y L LP A FD P+R V +SI+ A+ A
Sbjct: 60 LHGRAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 119
Query: 84 RFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A + +++L + P+ + +AC+ D +HG +V G G DS+
Sbjct: 120 MPRRALASLRDMLAGADDDVSPNAHALSAAVKACAVLRDRNAGACLHGSVLVRGFGDDSV 179
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
S+LV Y ++ +A KVF+ + PD + S+IS F +++++++ F ML +
Sbjct: 180 VLSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMN 239
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD T +++ L S + H + V S + MYA+C M A
Sbjct: 240 GVRPDGCTFGSMMTALGNSKRGSQARQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEA 299
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + + V+ AL+ GY Q G+Y K + F++ M + D + +VL A A
Sbjct: 300 RKVFDRMQVSNEVSRCALLGGYCQNGEYEKVIALFKE--MDKEDGDWYSLGTVLRACAGL 357
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++V PG IH ++ V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 358 SSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMI 417
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A F ++ +G PD +F +L AC H G+V GR F M ++YGI
Sbjct: 418 GGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGI 477
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV L LEEA I P D ++ +L + N D+AE V+
Sbjct: 478 APGIEHYNCMVDLFSRVELLEEAEDLINKSPFRNDSSLWADILGASATHSNPDVAERVSK 537
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
++ E +P+ ++L N Y GRW+D +++R + ++KE G+SWV +
Sbjct: 538 KMMELEPQYHLSYILLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWVDAN 590
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 120/265 (45%), Gaps = 12/265 (4%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S+ ++ HA V L + + + +YA ++ AR +FD+ + +++ Y
Sbjct: 262 SQARQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQVSNEVSRCALLGGY 321
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +LFK + + D ++ + RAC+ S + + +H + RD
Sbjct: 322 CQNGEYEKVIALFKEMDKED--GDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMAGWRDV 379
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ SALV Y+K +D A VF+ + + + N+MI GFA G ++++ LF+ M+R
Sbjct: 380 VVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNGHGERAINLFNRMVRE 439
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQG-IHGFC----LKSSFDSYDYVSSVLVSMYARCN 254
G PD + +G++ ++ G+ + C + + Y+ +V +++R
Sbjct: 440 GPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGIAPGIEHYN----CMVDLFSRVE 495
Query: 255 CMNSAYHVFN-SLFHPDLVTWSALI 278
+ A + N S F D W+ ++
Sbjct: 496 LLEEAEDLINKSPFRNDSSLWADIL 520
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + + RD + LV LYA + A +F+ + R+
Sbjct: 350 VLRACAGLSSVKPGKEIHCRFLRMAGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRN 409
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP-GLRFVH 127
WN++I +A A +LF ++R +PD ++ + ACS + G + +
Sbjct: 410 TITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFN 469
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA 158
G+ + +V +S++ L++EA
Sbjct: 470 SMCKDYGIAPGIEHYNCMVDLFSRVELLEEA 500
>gi|293331543|ref|NP_001169748.1| uncharacterized protein LOC100383629 [Zea mays]
gi|224031397|gb|ACN34774.1| unknown [Zea mays]
Length = 546
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 251/504 (49%), Gaps = 26/504 (5%)
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP---DNFTYACITRACSE 116
+FD+ R WNS++ A A A DA +L + +L D+ T + AC+
Sbjct: 14 VFDEMALRDSVSWNSLLSASASA---TDALALLRRMLSAAPGAAACDHATLTTVLSACAR 70
Query: 117 NSDLPG---LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
G L VHG A GL + +AL+TAY + S A +VFDG++D +++
Sbjct: 71 AGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFDGMADRNVITW 130
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV--------GQ 225
+M+SG A + +SL LF M R V + SLL+ GQ
Sbjct: 131 TAMVSGMARAERYSESLSLFRQMRRA---------VDANRASYSSSLLACAGSRAAREGQ 181
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
IHG +K+ ++ +V S L+ MY++C M A VF S PD V+ + ++ G++Q G
Sbjct: 182 QIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNG 241
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
+A F ++ +G + D ++++VL A SA G IH I+ F + V +
Sbjct: 242 LEEEAFRLFAEMVGKGIRVDANMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTYVCN 301
Query: 346 ALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNP 405
L++MYSKCG L I+VF+ +N +T+NS+I HG ++ F F + G+ P
Sbjct: 302 GLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARHGHGWEVFGLFESMEADGVKP 361
Query: 406 DESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSF 465
+ TF +LL C H G G EI M +YGI K EHY +V +LG A L++A +F
Sbjct: 362 TDVTFLSLLHGCSHVGSPRKGLEILDSMPSKYGIHPKVEHYACVVDMLGRASQLDDAKAF 421
Query: 466 IWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRW 525
I P + +L+ C + NS + E A +L DP A V+LSN Y+ +GRW
Sbjct: 422 IEDGPFKDSALLWQSLMGACSFHKNSGVGECAAEKLLLLDPDCTAAYVLLSNVYSSEGRW 481
Query: 526 DDVMKLRDDIVDNGLRKEAGVSWV 549
DD ++ + GLRK+ G SW+
Sbjct: 482 DDRARIMKRMRARGLRKDTGKSWI 505
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 156/334 (46%), Gaps = 2/334 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+H L A L + L+ Y + SA +FD R+V W +++ A A R
Sbjct: 83 VHGLAASCGLDAEVSVGNALITAYFECSSPGSAERVFDGMADRNVITWTAMVSGMARAER 142
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSA 144
++++ SLF+ +R + + +Y+ AC+ + + +HG A+ +GL D S
Sbjct: 143 YSESLSLFRQ-MRRAVDANRASYSSSLLACAGSRAAREGQQIHGLAVKAGLETDLHVESE 201
Query: 145 LVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPD 204
L+ YSK L+++A++VF DPD V +++GFA G +++ +LF M+ G D
Sbjct: 202 LMDMYSKCGLMEDALRVFRSGQDPDEVSLTVILAGFAQNGLEEEAFRLFAEMVGKGIRVD 261
Query: 205 EYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFN 264
+ ++ + ++G+ IH +K F YV + L++MY++C + + VF+
Sbjct: 262 ANMVSAVLGAFGASAPFALGKQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFD 321
Query: 265 SLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWP 324
+ VTW+++I Y++ G + F + G K V S+L + +
Sbjct: 322 GTPSKNTVTWNSIIAAYARHGHGWEVFGLFESMEADGVKPTDVTFLSLLHGCSHVGSPRK 381
Query: 325 G-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G ++ ++G V + +VDM + L
Sbjct: 382 GLEILDSMPSKYGIHPKVEHYACVVDMLGRASQL 415
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 135/278 (48%), Gaps = 18/278 (6%)
Query: 149 YSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP---DE 205
Y + +A++VFD ++ D V NS++S A +L L ML D
Sbjct: 2 YGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASA---TDALALLRRMLSAAPGAAACDH 58
Query: 206 YTLVGLIS-------GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
TL ++S G SL +V HG D+ V + L++ Y C+ S
Sbjct: 59 ATLTTVLSACARAGGGTGSASLPAV----HGLAASCGLDAEVSVGNALITAYFECSSPGS 114
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF+ + +++TW+A+++G ++ Y ++L FR++ + A+ +S L A A
Sbjct: 115 AERVFDGMADRNVITWTAMVSGMARAERYSESLSLFRQMR-RAVDANRASYSSSLLACAG 173
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
S G IHG ++ G E + V S L+DMYSKCG + ++VF + + + ++ +
Sbjct: 174 SRAAREGQQIHGLAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDPDEVSLTVI 233
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+ G +G +AF F +++ KG+ D + SA+L A
Sbjct: 234 LAGFAQNGLEEEAFRLFAEMVGKGIRVDANMVSAVLGA 271
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 108/230 (46%), Gaps = 11/230 (4%)
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA---D 305
MY RC C A VF+ + D V+W++L++ + D AL R++ A D
Sbjct: 1 MYGRCGCRGDAVRVFDEMALRDSVSWNSLLSASASATD---ALALLRRMLSAAPGAAACD 57
Query: 306 PVLIASVLAAAAKSANVWPGA---VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ +VL+A A++ A +HG G + V V +AL+ Y +C G +
Sbjct: 58 HATLTTVLSACARAGGGTGSASLPAVHGLAASCGLDAEVSVGNALITAYFECSSPGSAER 117
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF+ M++RN+IT+ +++ G+ ++ FR + + ++ + +++S+ L AC
Sbjct: 118 VFDGMADRNVITWTAMVSGMARAERYSESLSLFRQ-MRRAVDANRASYSSSLLACAGSRA 176
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+G++I + + G++ ++ + G +E+A S P
Sbjct: 177 AREGQQIHG-LAVKAGLETDLHVESELMDMYSKCGLMEDALRVFRSGQDP 225
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HAL K + + L+ +Y+ L + +FD TP ++ WNSII AYA
Sbjct: 282 KQIHALAIKRCFGGNTYVCNGLINMYSKCGELQESIRVFDGTPSKNTVTWNSIIAAYARH 341
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
+ LF+++ +KP + T+ + CS
Sbjct: 342 GHGWEVFGLFESMEADGVKPTDVTFLSLLHGCS 374
>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Glycine max]
Length = 674
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/543 (29%), Positives = 272/543 (50%), Gaps = 31/543 (5%)
Query: 33 SLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLF 92
SLLR+P + L+ A+I+ W II+ YA + + F
Sbjct: 10 SLLRNPNTVVPTCHVKQLH-----AQIVKTTKATPHSLAWICIIKCYASHGLLRHSLASF 64
Query: 93 KNLLRT-QLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
NLLR+ + PD + + RA + + +H I G D T++AL+ YSK
Sbjct: 65 -NLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTANALMNMYSK 123
Query: 152 LS----------------------LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
ID K+FD + D+V N++I+G A G ++++
Sbjct: 124 FHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEA 183
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L + M + PD +TL ++ E + ++ G+ IHG+ ++ FD ++ S L+ M
Sbjct: 184 LNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDM 243
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YA+C + + F+ L + D ++W+++I G Q G + + L +FR++ + K V
Sbjct: 244 YAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEKVKPMQVSF 303
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET--M 367
+SV+ A A + G +H Y+I+ GF+ + ++S+L+DMY+KCG + + +F M
Sbjct: 304 SSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEM 363
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
+R+++++ ++I+G +HG A F +++ G+ P F A+L AC H GLV++G
Sbjct: 364 CDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGW 423
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
+ F M ++G+ EHY + LLG AG LEEAY FI ++ + +V LL+ C
Sbjct: 424 KYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRA 483
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+ N +LAE V +++ DP V++SN Y+ RW D KLR + GL+K S
Sbjct: 484 HKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAAQRWRDAAKLRVRMRKTGLKKTPACS 543
Query: 548 WVS 550
W+
Sbjct: 544 WIE 546
>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 953
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 149/543 (27%), Positives = 281/543 (51%), Gaps = 2/543 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + + K +H K SL ++ L+ +Y+ + ++++F ++
Sbjct: 282 VLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNALMDMYSKWGCIIDSQMIFKLNNNKN 341
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLL--RTQLKPDNFTYACITRACSENSDLPGLRFV 126
V WN+++ ++ + L + +L +K D T C + S LP L+ +
Sbjct: 342 VVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKEL 401
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H ++ D + ++A V +Y+K + A +VF G+ L N++I G+A
Sbjct: 402 HCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDP 461
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
SL M G PD +T+ L+S + L +G+ +HGF +++ + +V +
Sbjct: 462 RLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 521
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+S+Y C + + +F+++ LV+W+ +ITG+ Q G +AL FR++ + G +
Sbjct: 522 LSLYIHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCG 581
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ + +V A + ++ G H Y ++H E + ++ +++DMY+K G + +VF
Sbjct: 582 ISMMTVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNG 641
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ E++ ++N++I+G G+HG +A + F ++ G NPD+ TF +L AC H GL+++G
Sbjct: 642 LKEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEG 701
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
+M +G++ +HY ++ +LG AG L+ A + + D + +LLS C
Sbjct: 702 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCR 761
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGV 546
I+ N ++ E VA +LF +P K V+LSN YA G+WDDV ++R + + LRK+AG
Sbjct: 762 IHQNLEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGC 821
Query: 547 SWV 549
SW+
Sbjct: 822 SWI 824
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 215/426 (50%), Gaps = 16/426 (3%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLR-DPFYATKLVRLYALNNVLPSARILFDKTPQ 66
L+L+ S + + +++H LV+ ++ LR D T+++ +YA+ +R FD
Sbjct: 89 LLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLF-KNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+++F WN++I +Y+ +++ +F K + +T L PDNFT+ C+ +AC+ SD+
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
VHG + +GL D +ALV+ Y + +A+K+FD + + +LV NSMI F+ G
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNGD 268
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
D + PD T+V ++ + VG+G+HG+ +K S D V++
Sbjct: 269 -DGAFM-----------PDVATVVTVLPVCAREREIGVGKGVHGWAVKLSLDKELVVNNA 316
Query: 246 LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL--NMQGKK 303
L+ MY++ C+ + +F + ++V+W+ ++ G+S +GD R++ + K
Sbjct: 317 LMDMYSKWGCIIDSQMIFKLNNNKNVVSWNTMVGGFSAEGDIHGTFDLLRQMLAGSEDVK 376
Query: 304 ADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQV 363
AD V I + + + + +H Y ++ F ++++A V Y+KCG L +V
Sbjct: 377 ADEVTILNAVPVCFDESVLPSLKELHCYSLKQEFVYDELLANAFVASYAKCGSLSYAQRV 436
Query: 364 FETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV 423
F + + + ++N++I G + + + GL PD T +LL AC +
Sbjct: 437 FHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDNFTVCSLLSACSKLKSL 496
Query: 424 NDGREI 429
G+E+
Sbjct: 497 RLGKEV 502
>gi|224069701|ref|XP_002303023.1| predicted protein [Populus trichocarpa]
gi|222844749|gb|EEE82296.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/473 (31%), Positives = 235/473 (49%), Gaps = 26/473 (5%)
Query: 101 KPDNFT-----YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
KP N + + + C N+ +P ++ I + +D L+ S L+ I
Sbjct: 24 KPKNTPNRRRHFISLLQNCKHNNQIPP---IYAKIIRNHHHQDPFVVFELLRVCSNLNSI 80
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
A K+F +P++ L ++I G ++ + L+ M+ PD Y + ++
Sbjct: 81 GYASKIFSHTQNPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKAC 140
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT-- 273
L G+ +H LK S + L+ +Y +C A VF+ + D+V
Sbjct: 141 GCHLALKEGREVHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVAST 200
Query: 274 ----------------WSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
W+A+I G + G+ +AL FR + + + V I VL+A +
Sbjct: 201 VMINYYFDHGIKDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACS 260
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ + G + Y+ +H EL+ V AL++MYS+CG + +VFE M E+N+ITYNS
Sbjct: 261 ELGALQLGRWVRSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNS 320
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I+G LHG + +A E FR +I++G P TF +L AC HGGL G EIF M ++Y
Sbjct: 321 MIMGFALHGKSVEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDY 380
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
GI+ + EHY MV LLG G LEEAYSFI + D + GALLS C I+GN +LAE V
Sbjct: 381 GIEPQIEHYGCMVDLLGRLGRLEEAYSFIRMMKVAPDHVMLGALLSACKIHGNLELAERV 440
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
A L ++LSN Y+ G+W + ++R ++ + G+ KE G S +
Sbjct: 441 AKSLVACKNADSGTYILLSNAYSSSGKWKEAAEVRTNMREEGIEKEPGCSSIE 493
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 200/460 (43%), Gaps = 30/460 (6%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
HF+ L + H + + ++A + + +DPF +L+R+ + N + A +F T
Sbjct: 34 HFISLLQNCKHNN--QIPPIYAKIIRNHHHQDPFVVFELLRVCSNLNSIGYASKIFSHTQ 91
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
+V+L+ ++I L+ + D L+ ++ + L PD++ + +AC + L R
Sbjct: 92 NPNVYLYTALIDGLVLSCYYTDGIHLYYQMINSSLVPDSYAVTSVLKACGCHLALKEGRE 151
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV-------------- 171
VH + GL + L+ Y K ++A +VFD + + D+V
Sbjct: 152 VHSQVLKLGLSSNRSIRIKLIELYGKCGAFEDARRVFDEMPERDVVASTVMINYYFDHGI 211
Query: 172 ---LC-NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGI 227
+C +MI G G +++L++F M R P+E T+V ++S E L +G+ +
Sbjct: 212 KDTVCWTAMIDGLVRNGESNRALEVFRNMQREDVMPNEVTIVCVLSACSELGALQLGRWV 271
Query: 228 HGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDY 287
+ K + +V L++MY+RC ++ A VF + +++T++++I G++ G
Sbjct: 272 RSYMDKHRIELNHFVGGALINMYSRCGDIDEAQRVFEQMKEKNVITYNSMIMGFALHGKS 331
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSA 346
+A+ FR L QG V VL A + G + H +G E +
Sbjct: 332 VEAVELFRGLIKQGFTPSSVTFVGVLNACSHGGLAELGFEIFHSMAKDYGIEPQIEHYGC 391
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGL--- 403
+VD+ + G L M + + V+LG L + + K L
Sbjct: 392 MVDLLGRLGRLEEAYSFIRMMK----VAPDHVMLGALLSACKIHGNLELAERVAKSLVAC 447
Query: 404 -NPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
N D T+ L A G + E+ T M EE GI+ +
Sbjct: 448 KNADSGTYILLSNAYSSSGKWKEAAEVRTNMREE-GIEKE 486
>gi|75274055|sp|Q9LT48.1|PP244_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g20730
gi|9294399|dbj|BAB02480.1| unnamed protein product [Arabidopsis thaliana]
gi|51971823|dbj|BAD44576.1| unknown protein [Arabidopsis thaliana]
Length = 565
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/500 (30%), Positives = 256/500 (51%), Gaps = 4/500 (0%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPD 103
L+ LY + AR LFD+ +R V W ++I ++ DA LFK + R +K +
Sbjct: 54 LIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKAN 113
Query: 104 NFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFD 163
FTY + ++C + L +HG + I SAL++ Y++ ++EA FD
Sbjct: 114 QFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFD 173
Query: 164 GVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSV 223
+ + DLV N+MI G+ D S LF ML GK PD +T L+ L +
Sbjct: 174 SMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEI 233
Query: 224 GQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQ 283
+HG +K F + LV+ Y +C + +A+ + DL++ +ALITG+SQ
Sbjct: 234 VSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQ 293
Query: 284 QGD-YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHG-FELSV 341
Q + A F+ + K D V+++S+L A+V G IHG+ ++ V
Sbjct: 294 QNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDV 353
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
+ ++L+DMY+K G + + FE M E+++ ++ S+I G G HG +A + + + +
Sbjct: 354 ALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHE 413
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
+ P++ TF +LL AC H G G +I+ M ++GI+A+ EH ++ +L +G LEE
Sbjct: 414 RIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEE 473
Query: 462 AYSFIWSLPKPVDPAVS--GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTY 519
AY+ I S V + S GA L C +GN L+++ A QL +PRK + L++ Y
Sbjct: 474 AYALIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVY 533
Query: 520 AEDGRWDDVMKLRDDIVDNG 539
A +G WD+ + R + ++G
Sbjct: 534 AANGAWDNALNTRKLMKESG 553
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 3/352 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ K L ++H V K + + + L+ LYA + AR+ FD +R
Sbjct: 120 VLKSCKDLGCLKEGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERD 179
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN++I Y + + SLF+ +L KPD FT+ + RA L + +HG
Sbjct: 180 LVSWNAMIDGYTANACADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHG 239
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA-HCGFWD 187
AI G GR S +LV AY K + A K+ +G DL+ C ++I+GF+
Sbjct: 240 LAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTS 299
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY-VSSVL 246
+ +F M+R+ DE + ++ + +++G+ IHGF LKSS +D + + L
Sbjct: 300 DAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSL 359
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MYA+ + A F + D+ +W++LI GY + G++ KA+ + ++ + K +
Sbjct: 360 IDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPND 419
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVI-QHGFELSVMVSSALVDMYSKCGYL 357
V S+L+A + + G I+ +I +HG E S ++DM ++ GYL
Sbjct: 420 VTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYL 471
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 153/319 (47%), Gaps = 1/319 (0%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
+ CS + L +HG +I +G + L+ Y K + A K+FD +S D+V
Sbjct: 21 KLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVV 80
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
+MIS F+ CG+ +L LF M R +++T ++ + L G IHG
Sbjct: 81 SWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSV 140
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
K + V S L+S+YARC M A F+S+ DLV+W+A+I GY+ +
Sbjct: 141 EKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSF 200
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F+ + +GKK D S+L A+ + + +HG I+ GF S + +LV+ Y
Sbjct: 201 SLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAY 260
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLH-GFTYQAFEFFRDIIEKGLNPDESTF 410
KCG L ++ E +R++++ ++I G T AF+ F+D+I DE
Sbjct: 261 VKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVV 320
Query: 411 SALLCACCHGGLVNDGREI 429
S++L C V GR+I
Sbjct: 321 SSMLKICTTIASVTIGRQI 339
>gi|302799994|ref|XP_002981755.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
gi|300150587|gb|EFJ17237.1| hypothetical protein SELMODRAFT_115083 [Selaginella moellendorffii]
Length = 673
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 276/542 (50%), Gaps = 10/542 (1%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP-QRSVFLWNSI 75
SL + +HA + + + F LV +Y + L A +F+ +R F WN +
Sbjct: 24 HSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVARERIAFPWNIL 83
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGL 135
I A A + ++ +L++ + +KP+ T + AC+ DL R +H ++ G
Sbjct: 84 IAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREIHRSHVLGGR 143
Query: 136 GR--------DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWD 187
R D++ ++ALVT Y + + +A VF+G+ DL N+M++ ++ G
Sbjct: 144 SRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVAAYSRNGQMA 203
Query: 188 KSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLV 247
+++ + M G P E T VG++S L + IH L + +S V + LV
Sbjct: 204 QAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATGLESRPTVGTTLV 263
Query: 248 SMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPV 307
SMY RC + A F + D+V W+A+I Y+Q G ++ + ++++G + D V
Sbjct: 264 SMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHVMDLEGVRVDKV 323
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
+ VL A + A ++H ++ G EL V++ +ALV+ Y++ G+L VF M
Sbjct: 324 TLIGVLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLVDADLVFAEM 383
Query: 368 SERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGR 427
ERN+ T+++++ G ++ E +R++ +GL P+ T+ ++L AC H GL++ G
Sbjct: 384 EERNVATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFACNHAGLLDHGL 443
Query: 428 EIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHI 487
+ F M +YGI++ EH +V LLG +G L+EA + + S+P + + LL C
Sbjct: 444 DYFASMGRDYGIESCEEHCSCIVDLLGRSGRLDEAEALMASVPYRLGISAWMCLLGACRT 503
Query: 488 YGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVS 547
+G+ + VA + F+ + + A V LSN YA G WD+V ++R ++ N L K G S
Sbjct: 504 HGDVERGARVARRAFQVESGEVAPYVALSNMYAGHGMWDEVSRVR-QLMANTLDKSTGKS 562
Query: 548 WV 549
+V
Sbjct: 563 FV 564
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 150/338 (44%), Gaps = 9/338 (2%)
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
Y + R C+ L R +H + G G + ++LV Y K + +A VF+ V+
Sbjct: 13 YESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVA 72
Query: 167 DPDLVLC-NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ N +I+ A G +S+ L+ M G P+ TLV ++ L G+
Sbjct: 73 RERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGR 132
Query: 226 GIH-GFCLKSSFDSYD-------YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSAL 277
IH L Y+ +++ LV+MY RC + A VF + DL W+A+
Sbjct: 133 EIHRSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAM 192
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
+ YS+ G +A+ R++ ++G + +L+ + IH +++ G
Sbjct: 193 VAAYSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILATGL 252
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
E V + LV MY +CG LG + F+ + +++I+ +N++I G + + +
Sbjct: 253 ESRPTVGTTLVSMYGRCGSLGGAVCAFQRIRDKDIVAWNAMIAAYAQSGHSRDSIRIYHV 312
Query: 398 IIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTE 435
+ +G+ D+ T +L AC L + R + R+ +
Sbjct: 313 MDLEGVRVDKVTLIGVLDACSSLALTSKTRLVHARIVD 350
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 123/258 (47%), Gaps = 10/258 (3%)
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
LI P L G+ IH L+ + ++ + LV MY +C+ + A VF +
Sbjct: 16 LIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELVARER 75
Query: 271 LV-TWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIH 329
+ W+ LI +Q+G +++ +R+++ +G K + + + SVL A A ++ G IH
Sbjct: 76 IAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTGREIH 135
Query: 330 GYVIQHG--------FELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILG 381
+ G + ++++ALV MY +CG + VFE + R++ +N+++
Sbjct: 136 RSHVLGGRSRPYERPMPVDAVMATALVTMYGRCGSVADARAVFEGICGRDLAAWNAMVAA 195
Query: 382 LGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQA 441
+G QA R + +G+ P E TF +L CC G +++ R I + G+++
Sbjct: 196 YSRNGQMAQAVLVLRRMAVEGVRPGEGTFVGMLSWCCTVGALDEARSIHAHILAT-GLES 254
Query: 442 KTEHYIYMVKLLGLAGNL 459
+ +V + G G+L
Sbjct: 255 RPTVGTTLVSMYGRCGSL 272
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 308 LIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETM 367
L S++ A ++ G IH ++++HG+ + ++LV+MY KC L VFE +
Sbjct: 12 LYESLIRRCANPHSLEAGRSIHAHILRHGYGGERFLLNSLVEMYCKCDSLRDATAVFELV 71
Query: 368 S-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ ER +N +I G + ++ +R + +G+ P+ T ++L AC + + G
Sbjct: 72 ARERIAFPWNILIAANAQRGQSRESIALYRRMSCEGVKPNAITLVSVLGACANLEDLKTG 131
Query: 427 REI 429
REI
Sbjct: 132 REI 134
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ S S+T+ +HA + + D T LV YA L A ++F + +R+
Sbjct: 328 VLDACSSLALTSKTRLVHARIVDTGVELDVVLGTALVNAYARGGHLVDADLVFAEMEERN 387
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
V W++++ AYA + + +++ + L+P+ TY I AC+ L HG
Sbjct: 388 VATWSAMVAAYAQTGHPDRSLEMYREMQLQGLRPNYITYVSILFACNHAGLLD-----HG 442
Query: 129 GAIVSGLGRD 138
+ +GRD
Sbjct: 443 LDYFASMGRD 452
>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Brachypodium distachyon]
Length = 631
Score = 259 bits (663), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 235/438 (53%)
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C++ L + HG AI GL D++T + L+ Y+K D A VFD + +V
Sbjct: 67 CAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSIVSW 126
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
N+MI+G+ H G ++L+LF M R G E+TL I ++ + +H LK
Sbjct: 127 NTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALK 186
Query: 234 SSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
+ DS +V + ++ +YA+CN + A VF + LVTWS+L GY Q G + +AL+
Sbjct: 187 LALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEALHL 246
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
FR +G + ++++L+A A A G +H +++ GF + V+++LVD+Y++
Sbjct: 247 FRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDVYAR 306
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
CG + +F M +N++ +N++I H +++A F + + G+ P+E T+ ++
Sbjct: 307 CGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSV 366
Query: 414 LCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPV 473
L C H GLV GR F+ + + ++ HY MV +LG +G +EA+ + +P
Sbjct: 367 LSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEP 426
Query: 474 DPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRD 533
++ G+LL C Y N LA I A QLF+ +P G V+LSN YA G W++V+ R
Sbjct: 427 TASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARK 486
Query: 534 DIVDNGLRKEAGVSWVSG 551
+ D+G +KE G SW+
Sbjct: 487 YLKDSGAKKEMGRSWIEA 504
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 181/408 (44%), Gaps = 33/408 (8%)
Query: 10 LELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSV 69
L+L +SL K H L L+ D L+ LY AR++FD RS+
Sbjct: 64 LQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVFDIMHVRSI 123
Query: 70 FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGG 129
WN++I Y + A LF + R FT + AC+ + + +H
Sbjct: 124 VSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTI 183
Query: 130 AIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKS 189
A+ L +S +A++ Y+K ++I +A VF+ + + LV +S+ +G+ G +++
Sbjct: 184 ALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSSLFAGYVQNGLHEEA 243
Query: 190 LQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
L LF R G E+TL ++S +L G +H LK F +V++ LV +
Sbjct: 244 LHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCGFHGNFFVAASLVDV 303
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
YARC + AY +F + H ++V W+A+I +S+ +A+ F K+ G + V
Sbjct: 304 YARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTY 363
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
SVL+ + + V G +H F S+++S V E
Sbjct: 364 LSVLSVCSHAGLVEKG--------RHYF--SLLMSDRTV--------------------E 393
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
N++ Y+ ++ LG G T +A+E + P S + +LL +C
Sbjct: 394 PNVLHYSCMVDVLGRSGKTDEAWELLNKM---PFEPTASMWGSLLGSC 438
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%)
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D I+ L AK ++ G HG I G + + L+++Y+KCG VF
Sbjct: 56 DVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCARLVF 115
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
+ M R+I+++N++I G G QA + F + +G + E T S+ +CAC +N
Sbjct: 116 DIMHVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAIN 175
Query: 425 DGREIFT 431
+ +++ T
Sbjct: 176 ECKQLHT 182
>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
[Vitis vinifera]
Length = 640
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/546 (30%), Positives = 278/546 (50%), Gaps = 43/546 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVR-LYALN--NVLPSARILFDKTP 65
V+ L ++ L++ ++HAL+ K SL + F KL+R L+A + N L AR +FD+ P
Sbjct: 6 VMSLLQNATKLNQIIQIHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIP 65
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKP-DNFTYACITRACSENSDLPGLR 124
F+WN++IRAY + ++ SLF + + P D+++ + + +AC D +
Sbjct: 66 SPDTFIWNTMIRAYLNSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQ 125
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+H + GLG D +AL+ Y+K I+ A + D ++ PDLV N +++ + G
Sbjct: 126 KLHTQVLKIGLGSDLFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVG 185
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
+ + LFD M P E L+S IHG
Sbjct: 186 EINLAHDLFDRM------P-------------ERDLVSWNTMIHG--------------- 211
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
+A + +A +F+ DL++WS++I Y++ +AL F ++ +
Sbjct: 212 -----HASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLP 266
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D V + SVL+A + G +IH + ++ E+ + + ++LVDMY+KCG + ++VF
Sbjct: 267 DKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVF 326
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVN 424
M+ R++ ++++I+GL HGF A + F +I + + P++ TF +L AC H GLV+
Sbjct: 327 NGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVD 386
Query: 425 DGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSC 484
+G FT M++ Y + K EHY +V +LG AG L+EA I S+P D V ALL
Sbjct: 387 EGWTYFTSMSKVYDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGA 446
Query: 485 CHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEA 544
C IY N ++AE L E +P V+LSN Y++ WD V+ +R + + ++K
Sbjct: 447 CRIYKNVEIAEEATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVP 506
Query: 545 GVSWVS 550
G S +
Sbjct: 507 GSSSIE 512
>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
[Glycine max]
Length = 1582
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 267/531 (50%), Gaps = 7/531 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++H +V ++ L + L+ +Y + AR +F + + + WN++I AL+
Sbjct: 926 KQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVFWQMNEVDLVSWNTMISGCALS 985
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG----LRFVHGGAIVSGLGRD 138
+ +F +LLR L PD FT A + RACS L G +H A+ +G+ D
Sbjct: 986 GLEECSVGMFVDLLRGGLLPDQFTVASVLRACSS---LGGGCHLATQIHACAMKAGVVLD 1042
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
S S+ L+ YSK ++EA +F DL N+M+ G+ G + K+L+L+ M
Sbjct: 1043 SFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQE 1102
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G+ ++ TL L G+ I +K F+ +V S ++ MY +C M S
Sbjct: 1103 SGERANQITLANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMES 1162
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A +FN + PD V W+ +I+G + G AL+ + + + + D A+++ A +
Sbjct: 1163 ARRIFNEIPSPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSL 1222
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
+ G IH ++ V ++LVDMY+KCG + +F+ + I ++N++
Sbjct: 1223 LTALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAM 1282
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
I+GL HG +A +FF ++ +G+ PD TF +L AC H GLV++ E F M + YG
Sbjct: 1283 IVGLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYG 1342
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVA 498
I+ + EHY +V L AG + EA I S+P ++ LL+ C + + + + VA
Sbjct: 1343 IEPEIEHYSCLVDALSRAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVA 1402
Query: 499 HQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+L +P A V+LSN YA +W++V R+ + ++K+ G SWV
Sbjct: 1403 EKLLALEPSDSAAYVLLSNVYAAANQWENVASARNMMRKANVKKDPGFSWV 1453
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 191/421 (45%), Gaps = 33/421 (7%)
Query: 7 FLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
F +L + + L K HA + + D F L+ +Y+ L SAR LFD TP
Sbjct: 630 FSILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPD 689
Query: 67 --RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLR 124
R + WN+I+ A+A R D LF+ L R+ + T A + + C ++
Sbjct: 690 TSRDLVTWNAILSAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAE 747
Query: 125 FVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG 184
+HG A+ GL D + ALV Y+K I EA +FDG+ D+VL N M+ + G
Sbjct: 748 SLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMKAYVDTG 807
Query: 185 FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSS 244
++L LF R G PD+ TL L ++ Q + + LK +Y
Sbjct: 808 LEYEALLLFSEFNRTGLRPDDVTLCTL------ARVVKSKQNVLEWQLK-QLKAY----G 856
Query: 245 VLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
+ MY + D++ W+ ++ + Q+G+ +A+ F +
Sbjct: 857 TKLFMYD------------DDDDGSDVIAWNKTLSWFLQRGETWEAVDCFVDMINSRVAC 904
Query: 305 DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVF 364
D + +L+ A + G IHG V++ G + V V + L++MY K G + VF
Sbjct: 905 DGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRARTVF 964
Query: 365 ETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC------C 418
M+E +++++N++I G L G + F D++ GL PD+ T +++L AC C
Sbjct: 965 WQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSLGGGC 1024
Query: 419 H 419
H
Sbjct: 1025 H 1025
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 203/496 (40%), Gaps = 48/496 (9%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S S + LH K L D F A LV +YA + AR+LFD R V LWN +++
Sbjct: 742 SPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLWNVMMK 801
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY +A LF RT L+PD+ T + R
Sbjct: 802 AYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARV------------------------ 837
Query: 138 DSITSSALVTAYSKLSLIDEAIKVF---DGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ S V + L K+F D D++ N +S F G +++ F
Sbjct: 838 --VKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDCFV 895
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M+ D T V ++S + + L +G+ IHG ++S D V + L++MY +
Sbjct: 896 DMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTG 955
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++ A VF + DLV+W+ +I+G + G ++ F L G D +ASVL
Sbjct: 956 SVSRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLR 1015
Query: 315 AAAK-SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A + IH ++ G L VS+ L+D+YSK G + +F ++
Sbjct: 1016 ACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLA 1075
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLV--NDGREIFT 431
++N+++ G + G +A + + E G ++ T + A GGLV G++I
Sbjct: 1076 SWNAMMHGYIVSGDFPKALRLYILMQESGERANQITLAN--AAKAAGGLVGLKQGKQIQA 1133
Query: 432 RMTEE------YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCC 485
+ + + I + Y+ G +E A +P P D A + ++S C
Sbjct: 1134 VVVKRGFNLDLFVISGVLDMYLK-------CGEMESARRIFNEIPSPDDVAWT-TMISGC 1185
Query: 486 HIYGNSDLAEIVAHQL 501
G + A H +
Sbjct: 1186 VENGQEEHALFTYHHM 1201
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 139/314 (44%), Gaps = 16/314 (5%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + K++ A+V K D F + ++ +Y + SAR +F++ P W ++I
Sbjct: 1125 LKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTMISG 1184
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
+ A + ++ ++++PD +T+A + +ACS + L R +H + D
Sbjct: 1185 CVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFD 1244
Query: 139 SITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLR 198
++LV Y+K I++A +F + + N+MI G A G +++LQ F+ M
Sbjct: 1245 PFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEEMKS 1304
Query: 199 LGKTPDEYTLVGLISGLWEPSLLSVG-------QGIHGFCLKSSFDSYDYVSSVLVSMYA 251
G TPD T +G++S L+S Q I+G ++ + Y S LV +
Sbjct: 1305 RGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYG--IEPEIEHY----SCLVDALS 1358
Query: 252 RCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGDYGKALYYFRKLNM--QGKKADPVL 308
R + A V +S+ F + L+ Q D KL A VL
Sbjct: 1359 RAGRIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVL 1418
Query: 309 IASVLAAAAKSANV 322
+++V AAA + NV
Sbjct: 1419 LSNVYAAANQWENV 1432
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + +++HA K + DPF T LV +YA + AR LF +T + WN++I
Sbjct: 1225 ALEQGRQIHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIV 1284
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGLG 136
A +A F+ + + PD T+ + ACS + + + + G+
Sbjct: 1285 GLAQHGNAEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIE 1344
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVF 162
+ S LV A S+ I EA KV
Sbjct: 1345 PEIEHYSCLVDALSRAGRIREAEKVI 1370
>gi|449531466|ref|XP_004172707.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like, partial [Cucumis sativus]
Length = 610
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 272/550 (49%), Gaps = 19/550 (3%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
HF+ L +S ++++ +++ A + + + A +V + + AR LFD P
Sbjct: 27 HFI--SLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 84
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
V LWN+I R Y + + LF + ++P+ FT+ + ++C++
Sbjct: 85 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 144
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I GL + ++ L+ YS I A K+F G+ + ++V SMISG+ C
Sbjct: 145 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 204
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ +LFD L D ++SG E + + + FD+ Y ++
Sbjct: 205 VALARRLFD----LAPERDVVLWNIMVSGYIEIGDMKAARKL--------FDTMPYRDTM 252
Query: 246 ----LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+++ YA + + +F + ++ +W+ LI GY+ G + + L F+++ + G
Sbjct: 253 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 312
Query: 302 KKA-DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ + +VL+A A+ + G +H Y GF+ S+ V +AL+DMYSKCG +
Sbjct: 313 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 372
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++VFE+M +++IT+NS+I GL HG A F + G PD TF +LC+C H
Sbjct: 373 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 432
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV +G F M EY I + EHY MV L G AG L+ A F+ +P D + A
Sbjct: 433 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 492
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LL C IY N DLAE+ +L +P+ A V+LSN Y + GRW DV +L+ + D G
Sbjct: 493 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 552
Query: 541 RKEAGVSWVS 550
+K G S +
Sbjct: 553 KKLPGCSLIE 562
>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g35130, chloroplastic; Flags: Precursor
gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 804
Score = 259 bits (662), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 159/537 (29%), Positives = 275/537 (51%), Gaps = 8/537 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
SL K++HA+V K + D + L+ LY A +F++ P+R + WNS+I
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 78 AY-ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
Y AL F+ LFK +L+ KPD F+ ACS + +H A+ S +
Sbjct: 205 GYLALGDGFSSLM-LFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIE 263
Query: 137 R-DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDW 195
D + ++++ YSK + A ++F+G+ ++V N MI +A G + F
Sbjct: 264 TGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQK 323
Query: 196 MLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PD T + L+ S + G+ IHG+ ++ F + + + L+ MY C
Sbjct: 324 MSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECG 379
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ SA +F+ + ++++W+++I Y Q G AL F++L D IAS+L
Sbjct: 380 QLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILP 439
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A A+S ++ G IH Y+++ + + ++ ++LV MY+ CG L + F + +++++
Sbjct: 440 AYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVS 499
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+NS+I+ +HGF + F ++I +NP++STF++LL AC G+V++G E F M
Sbjct: 500 WNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMK 559
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
EYGI EHY M+ L+G GN A F+ +P + G+LL+ + + +A
Sbjct: 560 REYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIA 619
Query: 495 EIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSG 551
E A Q+F+ + V+L N YAE GRW+DV +++ + G+ + + S V
Sbjct: 620 EFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEA 676
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 133/471 (28%), Positives = 246/471 (52%), Gaps = 29/471 (6%)
Query: 13 SKSHQSL-----SRTKELHALVAKAS--LLRDPFYATKLV---------RLYALNNVLPS 56
S++HQ+ +R E + ++K + +LRD + TK V R +A + ++
Sbjct: 23 SENHQTTGKRNGNRNLEFDSGISKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMED 82
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
A LFD+ + FLWN +I+ + + +A + ++ +K D FTY + ++ +
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
S L + +H I G D ++L++ Y KL +A KVF+ + + D+V NSM
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLV---GLISGLWEPSLLSVGQGIHGFCLK 233
ISG+ G SL LF ML+ G PD ++ + G S ++ P + G+ IH ++
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKM---GKEIHCHAVR 259
Query: 234 SSFDSYD-YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
S ++ D V + ++ MY++ ++ A +FN + ++V W+ +I Y++ G A
Sbjct: 260 SRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFL 319
Query: 293 YFRKLNMQ-GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F+K++ Q G + D + ++L A+A + G IHGY ++ GF +++ +AL+DMY
Sbjct: 320 CFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRGFLPHMVLETALIDMY 375
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+CG L +F+ M+E+N+I++NS+I +G Y A E F+++ + L PD +T +
Sbjct: 376 GECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIA 435
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEA 462
++L A +++GREI + + + T +V + + G+LE+A
Sbjct: 436 SILPAYAESLSLSEGREIHAYIVKSR-YWSNTIILNSLVHMYAMCGDLEDA 485
>gi|297848206|ref|XP_002891984.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337826|gb|EFH68243.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 611
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 263/512 (51%), Gaps = 4/512 (0%)
Query: 41 ATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL 100
AT L+ Y ++ AR LFD+ P+R V W ++I YA ++ + A F + +
Sbjct: 48 ATNLIVSYFEKGLVEEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGR 107
Query: 101 KPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL-IDEAI 159
P+ FT + + ++C L VHG + G+ +AL+ Y+ S+ ++ A
Sbjct: 108 SPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAF 167
Query: 160 KVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPS 219
+F + + V ++I+GF H G L+++ ML Y + +
Sbjct: 168 LIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASID 227
Query: 220 LLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
++ G+ IH +K F S V + ++ Y RC ++ A F+ + DL+TW+ LI+
Sbjct: 228 SVTTGKQIHASVVKRGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLIS 287
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFEL 339
++ D +AL F++ QG + S++AA A A + G +HG + + GF
Sbjct: 288 EL-ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIYRRGFNK 346
Query: 340 SVMVSSALVDMYSKCGYLGLGIQVFETMSER-NIITYNSVILGLGLHGFTYQAFEFFRDI 398
+V +++AL+DMY+KCG + +VF + ER N++++ S+++G G HG+ +A E F +
Sbjct: 347 NVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMMIGYGSHGYGAEAVELFDKM 406
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+ G+ PD F A+L AC H GLV G + F M EYGI + Y +V LLG AG
Sbjct: 407 VSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDL-AEIVAHQLFENDPRKGAYKVMLSN 517
+ EAY + +P D + GA+L C + ++ L + + A ++ E PR VMLS
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAHKHTGLISRLAAKKVMELKPRMVGTYVMLSY 526
Query: 518 TYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
YA +G+W + ++R + G +KEAG+SW+
Sbjct: 527 IYAAEGKWVEFARVRKMMRMMGNKKEAGMSWI 558
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 181/339 (53%), Gaps = 16/339 (4%)
Query: 100 LKP-DNFTYACITRAC---SENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
KP NF + + AC S+N++ P + + I ++ L+ +Y + L+
Sbjct: 12 FKPIPNFVRSSLRNACVESSQNTESPPYK----------PKKHHILATNLIVSYFEKGLV 61
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
+EA +FD + + D+V +MI+G+A + + + F M + G++P+E+TL ++
Sbjct: 62 EEARSLFDEMPERDVVAWTAMITGYASSNYNSCAWECFHEMFKQGRSPNEFTLSSVLKSC 121
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN-CMNSAYHVFNSLFHPDLVTW 274
+L+ G +HG +K + YV + L++MYA C+ M +A+ +F + + VTW
Sbjct: 122 RNMKVLAYGALVHGVVVKLGMEGSLYVDNALMNMYATCSVTMEAAFLIFRDIKVKNDVTW 181
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
+ LITG++ GD L ++++ ++ P I + A+A +V G IH V++
Sbjct: 182 TTLITGFTHLGDGIGGLKMYKQMLLENADVTPYCITIAVRASASIDSVTTGKQIHASVVK 241
Query: 335 HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEF 394
GF+ ++ V ++++D Y +CGYL + F M ++++IT+N++I L + +A
Sbjct: 242 RGFQSNLPVMNSILDFYCRCGYLSEAKRYFHEMEDKDLITWNTLISELE-RSDSSEALLM 300
Query: 395 FRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRM 433
F+ +G P+ TF++L+ AC + +N G+++ R+
Sbjct: 301 FQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLP-SARILFDKTPQRSVFLWNSII 76
+L+ ++LH + + ++ A L+ +YA +P S R+ + +R++ W S++
Sbjct: 328 ALNCGQQLHGRIYRRGFNKNVELANALIDMYAKCGDIPDSERVFGEIEERRNLVSWTSMM 387
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVHGGAIVSGL 135
Y +A LF ++ + ++PD + + AC + GL++ + G+
Sbjct: 388 IGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGI 447
Query: 136 GRDSITSSALVTAYSKLSLIDEAIKVFDGVS-DPD 169
D + +V + I EA ++ + + PD
Sbjct: 448 NPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPD 482
>gi|326504202|dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/580 (29%), Positives = 283/580 (48%), Gaps = 38/580 (6%)
Query: 9 VLELSKSHQSLSRTKELHALV------AKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
VLEL + +S+ +LHA + A AS++ + + A + L AR +FD
Sbjct: 6 VLELLQQCRSIRHLDQLHAHLLAHGPSAVASVVPQLVASYCALSGRAGDVALCHARRMFD 65
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
+ P F +NS+IRAY+ + +A L +++LR + P+ FT + +ACS
Sbjct: 66 RVPDPDRFAYNSLIRAYSNSGCPQEALCLHRDVLRRGILPNEFTLPFVLKACSRARAAEH 125
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVF-DGVSDPDLVLCNSMISGFA 181
HG AI G R +AL+ + + + ++ ++F + ++V N+MI G A
Sbjct: 126 ALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFAEMAPHRNVVSWNTMIGGCA 185
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G ++ LF M R G D +T V L+ + L VG+ +H L S
Sbjct: 186 QAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLEVGRLVHCHMLASGSRVDLI 245
Query: 242 VSSVLVSMYARC-------------------------------NCMNSAYHVFNSLFHPD 270
+ + LV MY +C +++A F + +
Sbjct: 246 LGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALAKHGSVDAARDWFEQMPERN 305
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
+++W+A+I+ Y Q G + + L + ++ G D V +A VL+ ++ ++ G +IH
Sbjct: 306 IISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAGVLSVHGQNGDLASGRMIHC 365
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
Y+ + V V ++L+DMY++CG + I +F M +N I++N +I L +HG +
Sbjct: 366 YIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKNTISWNVIIGALAMHGRAQE 425
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
A FFR ++ +PDE TF LL AC HGGL+ DG+ F M Y ++ + EHY MV
Sbjct: 426 AVMFFRAMVSDAFSPDEITFVGLLSACSHGGLLEDGQYYFKAMRHIYNVKPEVEHYACMV 485
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
LLG G+L +A I +P D V GAL+ C I+G+ ++ ++ QL E + G
Sbjct: 486 DLLGRHGHLAKAVDLIKDMPMKPDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGINGG 545
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
V++SN E +W+D+ +LR + D G +K+ GVS +
Sbjct: 546 LFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMGVSSIE 585
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 200/469 (42%), Gaps = 66/469 (14%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILF- 61
F L F++ S++ ++ H + K +R F L+ A L +R LF
Sbjct: 108 FTLPFVLKACSRA-RAAEHALATHGVAIKLGYVRQVFVGNALLHSSASAGSLRDSRRLFA 166
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
+ P R+V WN++I A A ++A +LF+ + R + D FT+ + CS+ +L
Sbjct: 167 EMAPHRNVVSWNTMIGGCAQAGETSEACALFREMRRQGVLADVFTFVSLLLVCSKEGNLE 226
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLS---------------------------- 153
R VH + SG D I +ALV Y K
Sbjct: 227 VGRLVHCHMLASGSRVDLILGNALVDMYGKCGDLWMAHRCFDVMPIKNVVSWTSMLCALA 286
Query: 154 ---LIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
+D A F+ + + +++ N+MIS + G + ++L L++ M LG TPDE TL G
Sbjct: 287 KHGSVDAARDWFEQMPERNIISWNAMISCYVQGGRFPETLGLYNRMKSLGLTPDEVTLAG 346
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPD 270
++S + L+ G+ IH + S D V + L+ MYARC ++++ +F + + +
Sbjct: 347 VLSVHGQNGDLASGRMIHCYIQDSFSDPGVTVLNSLIDMYARCGQVDTSISLFTEMPNKN 406
Query: 271 LVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHG 330
++W+ +I + G +A+ +FR + D + +L+A + HG
Sbjct: 407 TISWNVIIGALAMHGRAQEAVMFFRAMVSDAFSPDEITFVGLLSACS-----------HG 455
Query: 331 YVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
+++ G Y Y ++ E + Y ++ LG HG +
Sbjct: 456 GLLEDG-------------QY----YFKAMRHIYNVKPE--VEHYACMVDLLGRHGHLAK 496
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
A + +D+ K PD + AL+ AC G V G+ ++ E GI
Sbjct: 497 AVDLIKDMPMK---PDVVVWGALIGACRIHGHVEIGKLAIKQLLELEGI 542
>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
Length = 936
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 152/541 (28%), Positives = 267/541 (49%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+L+ + ++L K + +++ S D F T L+ +YA A +F + Q +
Sbjct: 267 ILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVFGRMKQTN 326
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ W++II A+A +A F+ + + + P+ T+ + + S L L +H
Sbjct: 327 LITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHL 386
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
GL + +ALV Y + D+A VFD + P+L+ NSMI + C D
Sbjct: 387 LITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDD 446
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+LQLF M + G PD + ++ S + +H +S V + LV+
Sbjct: 447 ALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVN 506
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+ ++ A + + + W+ LI GY+ G +AL ++KL ++ D V
Sbjct: 507 MYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVT 566
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
SVL A S ++ G +IH ++ G + V+V +AL +MYSKCG + ++F++M
Sbjct: 567 FISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMP 626
Query: 369 ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGRE 428
R+ +++N ++ HG + + + R + ++G+ + TF ++L +C H GL+ +G +
Sbjct: 627 IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNGITFVSVLSSCSHAGLIAEGCQ 686
Query: 429 IFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIY 488
F + + GI+ KTEHY +V LLG AG L+EA +I +P +LL C +
Sbjct: 687 YFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKMPLEPGIVTWASLLGACRVQ 746
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
+ D ++ A +L E DP + V+LSN Y+E G W + KLR + ++K G+S
Sbjct: 747 KDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKNAAKLRRAMASRRVKKVPGISS 806
Query: 549 V 549
+
Sbjct: 807 I 807
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 226/461 (49%), Gaps = 3/461 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L + K +H+ V ++ D F T LV Y L AR +FD P RSV WNS+I
Sbjct: 175 ALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMIS 234
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AY+++ R +A +F+ + + + D T+ I AC L + V +
Sbjct: 235 AYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFEL 294
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
D +AL+T Y++ ++A +VF + +L+ +++I+ FA G ++L+ F M
Sbjct: 295 DLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQ 354
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
+ G P+ T + L++G PS L IH + D + + LV++Y RC +
Sbjct: 355 QEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPD 414
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF+ L P+L++W+++I Y Q + AL FR + QG + D V ++L A
Sbjct: 415 DARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACT 474
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
++ ++H V + G S +V ++LV+MY+K G L + + + M E+ I +N
Sbjct: 475 IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNV 534
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I G LHG + +A E ++ + + + D+ TF ++L AC + +G+ I + E
Sbjct: 535 LINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAV-EC 593
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
G+ + + + G++E A S+ P+ AVS
Sbjct: 594 GLDSDVIVKNALTNMYSKCGSMENARRIFDSM--PIRSAVS 632
Score = 179 bits (454), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 217/431 (50%), Gaps = 10/431 (2%)
Query: 47 LYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFT 106
+Y+ L A F K R+V WN +I AY+ F +A +LF +L + P+ T
Sbjct: 1 MYSRCGSLGDAVAAFGKIRARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAIT 60
Query: 107 YACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVS 166
+ +C +L VH ++ G ++++ ++AL+ Y K + +A VF+ ++
Sbjct: 61 LVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMA 120
Query: 167 DPDLVLCNSMISGFAHCG-FWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
+ ++V N+M+ ++ G W +++LF ML G + T + +++ + +P L G+
Sbjct: 121 EKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGK 180
Query: 226 GIHGFCLKSSFDSYD-YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQ 284
IH C++ S S D +V++ LV+ Y +C + A VF+ + + TW+++I+ YS
Sbjct: 181 FIHS-CVRESEHSLDVFVNTALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSIS 239
Query: 285 GDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVS 344
G+A + F+++ +G++ D V S+L A + G + + + FEL + V
Sbjct: 240 ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVG 299
Query: 345 SALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+AL+ MY++C QVF M + N+IT++++I HG +A +FR + ++G+
Sbjct: 300 TALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGIL 359
Query: 405 PDESTFSALLCACCHGGLVNDGREIFTR---MTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
P+ TF +LL +G G E +R + E+G+ T +V + G + ++
Sbjct: 360 PNRVTFISLL----NGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDD 415
Query: 462 AYSFIWSLPKP 472
A + L P
Sbjct: 416 ARTVFDQLELP 426
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 215/440 (48%), Gaps = 4/440 (0%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
+HAL + ++ AT L+ +Y L A+ +F++ +++V WN+++ Y+L
Sbjct: 80 VHALSLERGFFQNTLVATALLNMYGKCGTLLDAQSVFEEMAEKNVVTWNAMLGVYSLQGC 139
Query: 85 -FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ A LF +L +K + T+ + + + L +F+H S D ++
Sbjct: 140 CWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNT 199
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
ALV Y+K + +A KVFDG+ + NSMIS ++ ++ +F M + G+
Sbjct: 200 ALVNTYTKCGSLTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERC 259
Query: 204 DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVF 263
D T + ++ P L G+ + ++SF+ +V + L++MYARC A VF
Sbjct: 260 DRVTFLSILDACVNPETLQHGKHVRESISETSFELDLFVGTALITMYARCRSPEDAAQVF 319
Query: 264 NSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVW 323
+ +L+TWSA+IT ++ G G+AL YFR + +G + V S+L + +
Sbjct: 320 GRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLE 379
Query: 324 PGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLG 383
+ IH + +HG + + + +ALV++Y +C VF+ + N+I++NS+I G+
Sbjct: 380 ELSRIHLLITEHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMI-GIY 438
Query: 384 LHGFTY-QAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
+ + A + FR + ++G+ PD F +L AC G R++ + EE G+
Sbjct: 439 VQCERHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSH-GRTRKLVHQCVEESGLGGS 497
Query: 443 TEHYIYMVKLLGLAGNLEEA 462
+V + AG L+ A
Sbjct: 498 PLVQTSLVNMYAKAGELDVA 517
>gi|326522570|dbj|BAK07747.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 169/498 (33%), Positives = 252/498 (50%), Gaps = 7/498 (1%)
Query: 59 ILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENS 118
+L P + F +N +R +A A R L +LR L+PD +T + A +
Sbjct: 87 LLLTAHPTPTAFSFNVALRFFA-ASRPRTTLQLSLRMLRAALRPDAYTLPFLLLAAARCP 145
Query: 119 DLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMIS 178
H GL T +LVT YS L A +VFDG+ D+V NSMI
Sbjct: 146 APAFAASAHALLQKLGLHNHDHTVHSLVTMYSNLGRPRAARRVFDGILRRDVVSWNSMIK 205
Query: 179 GFAHCGFWDKSLQLFDWMLRLGKTP-DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
+ G D + ++F M+ G P + T+ +++ + L++G+ + + +
Sbjct: 206 AYQAAGMKDDAARMFRAMVAEGAVPPNAVTVAVVLAACRDAGDLALGRWLEEWVKSVGME 265
Query: 238 SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL 297
V S LV MY +C M A VF+++ H D V W+ALITGY+Q G +A+ F +
Sbjct: 266 VGSLVGSALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSM 325
Query: 298 NMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYL 357
G + D + + VL+A A + G + Y +Q GF +V V +ALVDMYSKCG L
Sbjct: 326 RQAGARPDKITLVGVLSACAAVGALELGTELDRYALQRGFYSNVYVGTALVDMYSKCGDL 385
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQA---FEFFRDIIEKGLNPDESTFSALL 414
IQVFE + +N ++N++I GL +G +A FE R ++GL PD+ TF +L
Sbjct: 386 TRAIQVFEKLPCKNEASWNALICGLAFNGRGQEAIRQFELMRK--QEGLRPDDITFIGVL 443
Query: 415 CACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVD 474
AC H GL+ DGR F +T E+ I K EHY MV LL AG+LEEA+ FI +P D
Sbjct: 444 SACVHAGLLKDGRRWFDSLTSEFQIIPKIEHYSCMVDLLARAGHLEEAWDFIEKIPGKPD 503
Query: 475 PAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDD 534
+ GALL+ C N +++ V +++ +P V+ S YA R DD ++R
Sbjct: 504 AVMLGALLAACRKCKNVEVSVRVINKIMLLEPSNSWNYVVSSKIYASSDRLDDSARMRGL 563
Query: 535 IVDNGLRKEAGVSWVSGS 552
+ + G+ K G SW+ S
Sbjct: 564 MRERGVSKIPGCSWIEVS 581
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 120/282 (42%), Gaps = 34/282 (12%)
Query: 42 TKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLK 101
+ LV +Y + AR +FD + WN++I YA +A SLF ++ + +
Sbjct: 272 SALVGMYEKCGEMAEARRVFDAIAHKDNVAWNALITGYAQNGMSKEAISLFHSMRQAGAR 331
Query: 102 PDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKV 161
PD T + AC+ L + A+ G + +ALV YSK + AI+V
Sbjct: 332 PDKITLVGVLSACAAVGALELGTELDRYALQRGFYSNVYVGTALVDMYSKCGDLTRAIQV 391
Query: 162 FDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSL 220
F+ + + N++I G A G ++++ F+ M + G PD+ T +G++S L
Sbjct: 392 FEKLPCKNEASWNALICGLAFNGRGQEAIRQFELMRKQEGLRPDDITFIGVLSACVHAGL 451
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITG 280
L G + FDS + S + + + H +S ++
Sbjct: 452 LKDG--------RRWFDS-----------------LTSEFQIIPKIEH-----YSCMVDL 481
Query: 281 YSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
++ G +A + K+ K D V++ ++LAA K NV
Sbjct: 482 LARAGHLEEAWDFIEKIP---GKPDAVMLGALLAACRKCKNV 520
>gi|334184678|ref|NP_180987.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546770|sp|O64705.2|PP184_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g34400
gi|330253874|gb|AEC08968.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 259 bits (662), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 266/537 (49%), Gaps = 13/537 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+++ +++ A + S+ + F K V L N + LF T + + + +N +IR
Sbjct: 49 SVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFN----YSSFLFSVTEEPNHYSFNYMIR 104
Query: 78 AYALAHRFND---AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
L + +ND A SL++ + + LKPD FTY + AC++ ++ R VH G
Sbjct: 105 G--LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVG 162
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L RD + +L+ Y+K + A K+FD +++ D V NSMISG++ G+ ++ LF
Sbjct: 163 LERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFR 222
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PDE TLV ++ L G+ + + ++ S L+SMY +C
Sbjct: 223 KMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG 282
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++SA VFN + D V W+A+IT YSQ G +A F ++ G D +++VL+
Sbjct: 283 DLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 342
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + G I + + + ++ V++ LVDMY KCG + ++VFE M +N T
Sbjct: 343 ACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT 402
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N++I G +A F + + P + TF +L AC H GLV+ G F M+
Sbjct: 403 WNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMS 459
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+G+ K EHY ++ LL AG L+EA+ F+ P D + A+L CH + +
Sbjct: 460 SMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIR 519
Query: 495 EIVAHQLFENDPRKGAYK-VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E L E K A V+ SN A+ WD+ K+R + D G+ K G SW+
Sbjct: 520 EKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 576
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L K++ ++ SL + + AT LV +Y + A +F+ P ++
Sbjct: 340 VLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKN 399
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
WN++I AYA +A LF R + P + T+ + AC + G R+ H
Sbjct: 400 EATWNAMITAYAHQGHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFH 456
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA---IKVFDGVSDPDLVLCNSMI 177
+ + GL + ++ S+ ++DEA ++ F G PD ++ +++
Sbjct: 457 EMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPG--KPDEIMLAAIL 507
>gi|356540705|ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g50420-like [Glycine max]
Length = 715
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 269/524 (51%), Gaps = 7/524 (1%)
Query: 35 LRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKN 94
L D T L+ +Y+ L SA ++F R WNS+I Y ++ + LF
Sbjct: 147 LNDICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKNNKIEEGIWLFIK 206
Query: 95 LLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL 154
++ P FTY + +CS D R +H IV + D +ALV Y
Sbjct: 207 MMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQNALVDMYCNAGN 266
Query: 155 IDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLG-KTPDEYTLVGLIS 213
+ A ++F + +PDLV NSMI+G++ +K++ LF + + PD+YT G+IS
Sbjct: 267 MQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFPKPDDYTYAGIIS 326
Query: 214 --GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL 271
G++ S S G+ +H +K+ F+ +V S LVSMY + + ++A+ VF S+ D+
Sbjct: 327 ATGVFPSS--SYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWRVFCSISVKDV 384
Query: 272 VTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGY 331
V W+ +ITGYS+ D A+ F ++ +G + D +++ V+ A A A + G +IH Y
Sbjct: 385 VLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAVLRQGEIIHCY 444
Query: 332 VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQA 391
++ G+++ + VS +L+DMY+K G L VF +SE ++ +NS++ G HG +A
Sbjct: 445 AVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEPDLKCWNSMLGGYSHHGMVEEA 504
Query: 392 FEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVK 451
+ F +I+++GL PD+ TF +LL AC H LV G+ ++ M G+ +HY MV
Sbjct: 505 LQVFEEILKQGLIPDQVTFLSLLSACSHSRLVEQGKFLWNYMN-SIGLIPGLKHYSCMVT 563
Query: 452 LLGLAGNLEEAYSFIWSLPKPVDP-AVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
L A LEEA I P D + LLS C I N + A ++ G
Sbjct: 564 LFSRAALLEEAEEIINKSPYIEDNLELWRTLLSACVINKNFKVGIHAAEEVLRLKAEDGP 623
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
V+LSN YA +WD V ++R ++ L K G+SW+ ++
Sbjct: 624 TLVLLSNLYAAARKWDKVAEIRRNMRGLMLDKYPGLSWIEAKND 667
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/470 (25%), Positives = 218/470 (46%), Gaps = 8/470 (1%)
Query: 9 VLELSKSHQSLSRTKELHALV---AKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
+L+ + SL ++LHAL+ A + PF ++ +YA L + ++FDK P
Sbjct: 16 LLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMP 75
Query: 66 QRSVFLWNSIIRAYALA--HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGL 123
+R++ +N+++ AY+ A + A L+ ++ L+P + T+ + +A S
Sbjct: 76 RRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTSLLQASSLLEHWWFG 135
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHC 183
+H GL D ++L+ YS + A VF + D D V NS+I G+
Sbjct: 136 SSLHAKGFKLGLN-DICLQTSLLNMYSNCGDLSSAELVFWDMVDRDHVAWNSLIMGYLKN 194
Query: 184 GFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
++ + LF M+ +G P ++T +++ G+ IH + + ++
Sbjct: 195 NKIEEGIWLFIKMMSVGFAPTQFTYCMVLNSCSRLKDYRSGRLIHAHVIVRNVSLDLHLQ 254
Query: 244 SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLN-MQGK 302
+ LV MY M +AY +F+ + +PDLV+W+++I GYS+ D KA+ F +L M
Sbjct: 255 NALVDMYCNAGNMQTAYRIFSRMENPDLVSWNSMIAGYSENEDGEKAMNLFVQLQEMCFP 314
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
K D A +++A + G +H VI+ GFE SV V S LV MY K +
Sbjct: 315 KPDDYTYAGIISATGVFPSSSYGKSLHAEVIKTGFERSVFVGSTLVSMYFKNHESDAAWR 374
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF ++S ++++ + +I G A F ++ +G D+ S ++ AC + +
Sbjct: 375 VFCSISVKDVVLWTEMITGYSKMTDGICAIRCFFQMVHEGHEVDDYVLSGVVNACANLAV 434
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKP 472
+ G EI + G + ++ + G+LE AY + +P
Sbjct: 435 LRQG-EIIHCYAVKLGYDVEMSVSGSLIDMYAKNGSLEAAYLVFSQVSEP 483
>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 599
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 237/431 (54%), Gaps = 1/431 (0%)
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L L+ VH IVSGL R + L++ I A ++F V +PD L +S++
Sbjct: 40 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 99
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ GF ++ + ML G YT +I + S L +G+ IH + + S
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 159
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
YV + L+++YA+ + M A VF+++ ++ W++LI+GY Q G +++ F +
Sbjct: 160 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 219
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G + D I S+L++ ++ + G +H Y +GF+L+V++ ++L++MY++CG +
Sbjct: 220 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 279
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+VF++M ERN++T+ ++I G G+HG+ QA E F ++ G P+ TF A+L AC H
Sbjct: 280 AREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAH 339
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS-LPKPVDPAVS 478
GL++DGR +F+ M E YG+ EH + MV + G AG L +AY FI +PK PAV
Sbjct: 340 SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVW 399
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
++L C ++ N DL VA + +P + VMLSN YA GR D V +R+ +
Sbjct: 400 TSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 459
Query: 539 GLRKEAGVSWV 549
L+K+ G S +
Sbjct: 460 RLKKQVGYSTI 470
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 208/454 (45%), Gaps = 42/454 (9%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L +S L +++HA + + L R TKL+ L + AR LF P FL
Sbjct: 33 LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFL 92
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
++S+++ + D ++ +L + N+T+ + +AC++ S L + +H +
Sbjct: 93 FDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVM 152
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
V G G D +AL+ Y+K S + A KVFD + ++ NS+ISG+ G +S+
Sbjct: 153 VCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIG 212
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF M+ G PD T+V L+S + L G +H + + FD + + L++MY
Sbjct: 213 LFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYT 272
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
RC ++ A VF+S+ ++VTW+A+I+GY G +A+ F ++ G + + + +
Sbjct: 273 RCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVA 332
Query: 312 VLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
VL+A A S + G + + + +G V + +VDM+ + G L
Sbjct: 333 VLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLN------------ 380
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
A++F + I K P + ++++L AC + G ++
Sbjct: 381 -------------------DAYQFIKKFIPK--EPGPAVWTSMLGACRMHRNFDLGVKV- 418
Query: 431 TRMTEEYGIQAKTE---HYIYMVKLLGLAGNLEE 461
E+ + + E HY+ + + LAG ++
Sbjct: 419 ----AEHVLSVEPENPGHYVMLSNIYALAGRMDR 448
>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 153/467 (32%), Positives = 236/467 (50%), Gaps = 36/467 (7%)
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSL-IDEAIK-VFDGVSDPDLVLCNSMISGF 180
++ VH GL + + L+ +KL + +D + VF V P+ L ++I G+
Sbjct: 55 VKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGY 114
Query: 181 AHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHG-FCLKSSFDSY 239
A G + +S+ L++ M R G P +T L+ +++G+ +H L F S
Sbjct: 115 ALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSD 174
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFH------------------------------- 268
YV + L+ MY +C C+ + VF+ +
Sbjct: 175 LYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPM 234
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
D+V W+A++TGY+Q +AL F ++ G K D V + V++A A+ +
Sbjct: 235 KDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWV 294
Query: 329 HGYVIQHGF--ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
Q GF +V+V SAL+DMY+KCG + +VFE M ERN+ +Y+S+I+G +HG
Sbjct: 295 RDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFAMHG 354
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
A E F ++++ + P+ TF +L AC H G+V G+++F M E +G+ +HY
Sbjct: 355 LAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSEDHY 414
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP 506
MV LLG AG LEEA + + +P V GALL C I+GN D+A+I A LFE +P
Sbjct: 415 ACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELEP 474
Query: 507 RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSS 553
++LSN YA GRWDDV K+R + GL+K G SWV G
Sbjct: 475 NGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCSWVEGKK 521
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 181/386 (46%), Gaps = 37/386 (9%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVL--PSARILFDKTPQRSVFLWNSII 76
+++ K++HA + + L + F KL+R +V P R++F + + FLW ++I
Sbjct: 52 INQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALI 111
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG-- 134
R YAL F ++ L+ ++ R + P +FT+ + +ACS D+ R VH I+ G
Sbjct: 112 RGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGF 171
Query: 135 ------------------------------LGRDSITSSALVTAYSKLSLIDEAIKVFDG 164
L RD I+ ++L+ AY+K+ ++ A ++FDG
Sbjct: 172 GSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDG 231
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ D+V +M++G+A ++L++F+ M G DE TLVG+IS +
Sbjct: 232 LPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYA 291
Query: 225 QGIHGFCLKSSF--DSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYS 282
+ +S F S V S L+ MYA+C + AY VF + ++ ++S++I G++
Sbjct: 292 NWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSYSSMIVGFA 351
Query: 283 QQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSV 341
G G A+ F ++ K + V VL A + + V G + + + HG S
Sbjct: 352 MHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFAMMEECHGVAPSE 411
Query: 342 MVSSALVDMYSKCGYLGLGIQVFETM 367
+ +VD+ + G L + + + M
Sbjct: 412 DHYACMVDLLGRAGRLEEALNLVKMM 437
>gi|356498282|ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/404 (36%), Positives = 220/404 (54%)
Query: 147 TAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEY 206
T+ ++ +D A ++FD + PD+VL N+M G+A +++ L +L G PD+Y
Sbjct: 77 TSNPTIASMDHAHRMFDKIPQPDIVLFNTMARGYARFDDPLRAILLCSQVLCSGLLPDDY 136
Query: 207 TLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL 266
T L+ L G+ +H +K YV L++MY CN +++A VF+ +
Sbjct: 137 TFSSLLKACARLKALEEGKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKI 196
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGA 326
P +V ++A+IT ++ +AL FR+L G K V + L++ A + G
Sbjct: 197 GEPCVVAYNAIITSCARNSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGR 256
Query: 327 VIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHG 386
IH YV ++GF+ V V++AL+DMY+KCG L + VF+ M R+ ++++I+ HG
Sbjct: 257 WIHEYVKKNGFDQYVKVNTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHG 316
Query: 387 FTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
QA R++ + + PDE TF +L AC H GLV +G E F MT EYGI +HY
Sbjct: 317 HGSQAISMLREMKKAKVQPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHY 376
Query: 447 IYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDP 506
M+ LLG AG LEEA FI LP P + LLS C +GN ++A++V ++FE D
Sbjct: 377 GCMIDLLGRAGRLEEACKFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFELDD 436
Query: 507 RKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
G V+LSN A +GRWDDV LR +VD G K G S +
Sbjct: 437 SHGGDYVILSNLCARNGRWDDVNHLRKMMVDKGALKVPGCSSIE 480
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 186/400 (46%), Gaps = 12/400 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPS---ARILFDKTP 65
+L L SL K++ A K +P TKL+ N + S A +FDK P
Sbjct: 38 ILSLIPKCTSLRELKQIQAYTIKTHQ-NNPTVLTKLINFCTSNPTIASMDHAHRMFDKIP 96
Query: 66 QRSVFLWNSIIRAYALAHRFND---AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
Q + L+N++ R YA RF+D A L +L + L PD++T++ + +AC+ L
Sbjct: 97 QPDIVLFNTMARGYA---RFDDPLRAILLCSQVLCSGLLPDDYTFSSLLKACARLKALEE 153
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ +H A+ G+G + L+ Y+ + +D A +VFD + +P +V N++I+ A
Sbjct: 154 GKQLHCLAVKLGVGDNMYVCPTLINMYTACNDVDAARRVFDKIGEPCVVAYNAIITSCAR 213
Query: 183 CGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
+++L LF + G P + T++ +S L +G+ IH + K+ FD Y V
Sbjct: 214 NSRPNEALALFRELQESGLKPTDVTMLVALSSCALLGALDLGRWIHEYVKKNGFDQYVKV 273
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
++ L+ MYA+C ++ A VF + D WSA+I Y+ G +A+ R++
Sbjct: 274 NTALIDMYAKCGSLDDAVSVFKDMPRRDTQAWSAMIVAYATHGHGSQAISMLREMKKAKV 333
Query: 303 KADPVLIASVLAAAAKSANVWPG-AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D + +L A + + V G H ++G S+ ++D+ + G L
Sbjct: 334 QPDEITFLGILYACSHTGLVEEGYEYFHSMTHEYGIVPSIKHYGCMIDLLGRAGRLEEAC 393
Query: 362 QVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIE 400
+ + + + I + +++ HG A + I E
Sbjct: 394 KFIDELPIKPTPILWRTLLSSCSSHGNVEMAKLVIQRIFE 433
>gi|449441542|ref|XP_004138541.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Cucumis sativus]
Length = 652
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 272/550 (49%), Gaps = 19/550 (3%)
Query: 6 HFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP 65
HF+ L +S ++++ +++ A + + + A +V + + AR LFD P
Sbjct: 69 HFI--SLLRSCKTVALLQKVQAQIITHGFQYNGYVAPNVVTSWVGLKQMAHARHLFDHFP 126
Query: 66 QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF 125
V LWN+I R Y + + LF + ++P+ FT+ + ++C++
Sbjct: 127 DPKVELWNAISRGYFHNAFYREVVFLFGKMKSMDVRPNCFTFPLVLKSCAKIGAFVEGEE 186
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
+H I GL + ++ L+ YS I A K+F G+ + ++V SMISG+ C
Sbjct: 187 IHCEVIKGGLEGNQFVATTLIDVYSGGRAIGSAYKLFVGMLERNIVAWTSMISGYILCNR 246
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV 245
+ +LFD L D ++SG E + + + FD+ Y ++
Sbjct: 247 VALARRLFD----LAPERDVVLWNIMVSGYIEIGDMKAARKL--------FDTMPYRDTM 294
Query: 246 ----LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
+++ YA + + +F + ++ +W+ LI GY+ G + + L F+++ + G
Sbjct: 295 SWNTMLNGYANNGDVEACEQLFEEMPERNVFSWNGLIGGYAHNGCFFEVLRCFKRMLIDG 354
Query: 302 KKA-DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ + +VL+A A+ + G +H Y GF+ S+ V +AL+DMYSKCG +
Sbjct: 355 LVVPNDATLVTVLSACARLGALDLGKWVHVYAATIGFKGSIYVGNALIDMYSKCGLIENA 414
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
++VFE+M +++IT+NS+I GL HG A F + G PD TF +LC+C H
Sbjct: 415 MEVFESMDLKDLITWNSMICGLATHGCGADALTLFHQMKINGEKPDGITFIGVLCSCTHL 474
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
GLV +G F M EY I + EHY MV L G AG L+ A F+ +P D + A
Sbjct: 475 GLVEEGTSYFNSMVNEYSIAPQIEHYGCMVDLFGRAGLLDRAIEFVKRMPMEADAVIWAA 534
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LL C IY N DLAE+ +L +P+ A V+LSN Y + GRW DV +L+ + D G
Sbjct: 535 LLGACRIYKNIDLAELALQKLIVLEPKNPANYVLLSNIYGDLGRWKDVARLKILMRDTGS 594
Query: 541 RKEAGVSWVS 550
+K G S +
Sbjct: 595 KKLPGCSLIE 604
>gi|3128231|gb|AAC26711.1| hypothetical protein [Arabidopsis thaliana]
gi|20197159|gb|AAM14947.1| hypothetical protein [Arabidopsis thaliana]
Length = 617
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 165/537 (30%), Positives = 266/537 (49%), Gaps = 13/537 (2%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+++ +++ A + S+ + F K V L N + LF T + + + +N +IR
Sbjct: 45 SVNQLRQIQAQMLLHSVEKPNFLIPKAVELGDFN----YSSFLFSVTEEPNHYSFNYMIR 100
Query: 78 AYALAHRFND---AKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
L + +ND A SL++ + + LKPD FTY + AC++ ++ R VH G
Sbjct: 101 G--LTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVG 158
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
L RD + +L+ Y+K + A K+FD +++ D V NSMISG++ G+ ++ LF
Sbjct: 159 LERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFR 218
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
M G PDE TLV ++ L G+ + + ++ S L+SMY +C
Sbjct: 219 KMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCG 278
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
++SA VFN + D V W+A+IT YSQ G +A F ++ G D +++VL+
Sbjct: 279 DLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 338
Query: 315 AAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIIT 374
A + G I + + + ++ V++ LVDMY KCG + ++VFE M +N T
Sbjct: 339 ACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEAT 398
Query: 375 YNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMT 434
+N++I G +A F + + P + TF +L AC H GLV+ G F M+
Sbjct: 399 WNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMS 455
Query: 435 EEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA 494
+G+ K EHY ++ LL AG L+EA+ F+ P D + A+L CH + +
Sbjct: 456 SMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIR 515
Query: 495 EIVAHQLFENDPRKGAYK-VMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
E L E K A V+ SN A+ WD+ K+R + D G+ K G SW+
Sbjct: 516 EKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIE 572
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S +L K++ ++ SL + + AT LV +Y + A +F+ P ++
Sbjct: 336 VLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKN 395
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDL-PGLRFVH 127
WN++I AYA +A LF R + P + T+ + AC + G R+ H
Sbjct: 396 EATWNAMITAYAHQGHAKEALLLFD---RMSVPPSDITFIGVLSACVHAGLVHQGCRYFH 452
Query: 128 GGAIVSGLGRDSITSSALVTAYSKLSLIDEA---IKVFDGVSDPDLVLCNSMI 177
+ + GL + ++ S+ ++DEA ++ F G PD ++ +++
Sbjct: 453 EMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPG--KPDEIMLAAIL 503
>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g02330-like [Cucumis sativus]
Length = 868
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 163/527 (30%), Positives = 255/527 (48%), Gaps = 2/527 (0%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH K D T + +YA + + A LF P ++ +N++I YA
Sbjct: 279 QLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNE 338
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYA-CITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ A LF L + D + + ++ A GL+ +HG AI S L + +
Sbjct: 339 QGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ-LHGLAIKSNLSSNICVA 397
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+A++ Y K + EA +FD + D V N++I+ K+L F MLR
Sbjct: 398 NAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKME 457
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
PDE+T ++ S G +HG +KS +V S LV MY++C M A +
Sbjct: 458 PDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKI 517
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANV 322
L +V+W+A+I+G+S Q + +F + G + D A+VL A A V
Sbjct: 518 HYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATV 577
Query: 323 WPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGL 382
G IH +I+ V ++S LVDMYSKCG + + +F +R+ +T+N++I G
Sbjct: 578 GLGKQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGF 637
Query: 383 GLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAK 442
HG +A E F ++ + + P+ +TF ++L AC H G G F +M Y ++ +
Sbjct: 638 AYHGLGEEALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQ 697
Query: 443 TEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLF 502
EHY MV +LG +G +EEA I +P D + LLS C I GN ++AE A L
Sbjct: 698 LEHYSCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLL 757
Query: 503 ENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
+ DP + +LSN YA+ G W V K+R + + L+KE G SW+
Sbjct: 758 KLDPEDSSAYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWI 804
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 132/487 (27%), Positives = 229/487 (47%), Gaps = 13/487 (2%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
++H + + D + LV +YA N L + +F + P ++ W++ I
Sbjct: 178 QIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQND 237
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
+ LFK + R + TYA + R+C+ S +H A+ + G D I +
Sbjct: 238 QLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGT 297
Query: 144 ALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTP 203
A + Y+K + +A K+F + D +L N+MI G+A ++ Q F L+L K
Sbjct: 298 ATLDMYAKCDNMSDAYKLFSLLPDHNLQSYNAMIIGYAR---NEQGFQAFKLFLQLQKNS 354
Query: 204 ---DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAY 260
DE +L G +S S G +HG +KS+ S V++ ++ MY +C + A
Sbjct: 355 FSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKCGALVEAS 414
Query: 261 HVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSA 320
+F+ + D V+W+A+IT Q GK L +F + + D SVL A A
Sbjct: 415 GLFDEMEIRDPVSWNAIITACEQNESEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQR 474
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
G +HG +I+ G L + V SALVDMYSKCG + ++ + E+ ++++N++I
Sbjct: 475 AFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIIS 534
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
G L + + FF ++E G+ PD T++ +L C + V G++I +M + ++
Sbjct: 535 GFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHAQMIK---LE 591
Query: 441 AKTEHYI--YMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLA-EIV 497
++ YI +V + GN+ ++ PK D A++ +G + A E+
Sbjct: 592 LLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKR-DSVTWNAMICGFAYHGLGEEALELF 650
Query: 498 AHQLFEN 504
H L EN
Sbjct: 651 EHMLHEN 657
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/496 (24%), Positives = 227/496 (45%), Gaps = 35/496 (7%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
+ + + ++L KE HA + + F L+++Y L A +F++ PQR
Sbjct: 30 IFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEMPQRD 89
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNL-------------------------LRTQLKP- 102
+ WN+++ A A R A+++F ++ + LK
Sbjct: 90 IVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMR 149
Query: 103 ------DNFTYACITRACSENSD-LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLI 155
D+ T A + CS D + G++ +HG A+ G D +T SALV Y+K + +
Sbjct: 150 DLGVMFDHTTLAVSLKICSLLEDQVLGIQ-IHGIAVQMGFDYDVVTGSALVDMYAKCNSL 208
Query: 156 DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGL 215
++++ VF + D + + ++ I+G + L+LF M R G + T +
Sbjct: 209 EDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSC 268
Query: 216 WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWS 275
S +G +H LK+ F S V + + MYA+C+ M+ AY +F+ L +L +++
Sbjct: 269 AGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDHNLQSYN 328
Query: 276 ALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
A+I GY++ +A F +L D V ++ L+AAA G +HG I+
Sbjct: 329 AMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKS 388
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFF 395
++ V++A++DMY KCG L +F+ M R+ +++N++I + + F
Sbjct: 389 NLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNESEGKTLSHF 448
Query: 396 RDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGL 455
++ + PDE T+ ++L AC ++G E+ R+ + G+ K +V +
Sbjct: 449 GAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKS-GMGLKMFVGSALVDMYSK 507
Query: 456 AGNLEEAYSFIWSLPK 471
G +EEA + L +
Sbjct: 508 CGMMEEAEKIHYRLEE 523
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 158/346 (45%), Gaps = 38/346 (10%)
Query: 106 TYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGV 165
T++ I + CS L + H I+SG ++ L+ Y K ++ A KVF+ +
Sbjct: 26 TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85
Query: 166 SDPDLVLCNSM--------------------------------ISGFAHCGFWDKSLQLF 193
D+V N+M ISG+ G KS+ +F
Sbjct: 86 PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145
Query: 194 DWMLRLGKTPDEYTL-VGL-ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-SVLVSMY 250
M LG D TL V L I L E +L G IHG ++ FD YD V+ S LV MY
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVL--GIQIHGIAVQMGFD-YDVVTGSALVDMY 202
Query: 251 ARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIA 310
A+CN + + VF+ L + ++WSA I G Q + L F+++ +G A
Sbjct: 203 AKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYA 262
Query: 311 SVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
SV + A + G +H + ++ F V+V +A +DMY+KC + ++F + +
Sbjct: 263 SVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH 322
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
N+ +YN++I+G + +QAF+ F + + + DE + S L A
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSA 368
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 133/284 (46%), Gaps = 10/284 (3%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL+ ++ S E+H + K+ + F + LV +Y+ ++ A + + +++
Sbjct: 466 VLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT 525
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHG 128
+ WN+II ++L + D++ F ++L ++PDNFTYA + C+ + + + +H
Sbjct: 526 MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHA 585
Query: 129 GAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I L D +S LV YSK + +++ +F D V N+MI GFA+ G ++
Sbjct: 586 QMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEE 645
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLIS-----GLWEPSLLSVGQGIHGFCLKSSFDSYDYVS 243
+L+LF+ ML P+ T V ++ G + L + + L+ + Y
Sbjct: 646 ALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHY---- 701
Query: 244 SVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
S +V + R + A + + F D + W L++ QG+
Sbjct: 702 SCMVDILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGN 745
>gi|147771061|emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
Length = 722
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 179/624 (28%), Positives = 284/624 (45%), Gaps = 90/624 (14%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYAL--NNVLPSARILFDKTPQRSVFLWNSI 75
++ K +HA +A+L K+ R A+ N L A LF + Q + F +N++
Sbjct: 99 AMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTL 158
Query: 76 IRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE-NSDLP------------- 121
IR Y+ + + + LF + R + PD FT+ + + S DLP
Sbjct: 159 IRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAGV 218
Query: 122 -------------------------------------GLRFVHGGAIVSGLGRDSITSSA 144
L+ +H A + L ++ +
Sbjct: 219 DYDKYKTLKSYISNKVMHMLPTSQSLASMAEACLAMQALKLIHARAFRANLHNHALVLAK 278
Query: 145 LV--TAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ A S + A ++F + P+ N++I G++ +S+QLF+ M R
Sbjct: 279 IFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVD 338
Query: 203 PDEYTLVGLISGL----WEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
PD +T L+ G + L+ IHG LK F + +V + L+ +YA +
Sbjct: 339 PDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAA 398
Query: 259 AYHVFNSLFHPDLVTWSAL-------------------------------ITGYSQQGDY 287
A+ VFN + D+V+WS L ++GY+Q
Sbjct: 399 AHQVFNEMVGADVVSWSGLVVAHVRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRS 458
Query: 288 GKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
+AL FR++ G + D V + V++A ++ G +H Y+ ++GF V + +AL
Sbjct: 459 REALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENGFGWMVSLCNAL 518
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
+DMY+KCG + L QVF M +++IT+NS+I HG AF F ++ G+ PD
Sbjct: 519 IDMYAKCGCMDLAWQVFNNMERKSLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDG 578
Query: 408 STFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIW 467
TF ALL A H G V+DG +F M +YG++A EHY MV +LG AG LEEAY I
Sbjct: 579 VTFLALLTAYTHKGWVDDGYGLFESMQRDYGVEAGVEHYGCMVDMLGRAGRLEEAYKLIT 638
Query: 468 SLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDD 527
S+ P + V GALL+ C IYG+ ++ E V +L E P +G Y ++L + Y GR +
Sbjct: 639 SMSMPCNDVVWGALLAACRIYGDVEMGERVLKKLIELKPDEGGYYILLRDIYVAAGRRAE 698
Query: 528 VMKLRDDIVDNGLRKEAGVSWVSG 551
++LR + NG +K G SWV
Sbjct: 699 AIELRRAMDVNGAKKTLGCSWVGA 722
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/537 (19%), Positives = 202/537 (37%), Gaps = 101/537 (18%)
Query: 84 RFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS 143
++ KS N + L P + + A + AC + L+ +H A + L ++ +
Sbjct: 68 KYKTLKSYISNKVMHML-PTSQSLASMAEACLA---MQALKLIHARAFRANLHNHALVLA 123
Query: 144 ALV--TAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGK 201
+ A S + A ++F + P+ N++I G++ +S+QLF+ M R
Sbjct: 124 KIFRFAAVSPNGCLHYADRLFSQIHQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCV 183
Query: 202 TPDEYTLVGLISG----LWEPSLLSVGQGIHGFCLKSSFDSYDYVSSV------------ 245
PD +T L+ G + L+ IHG + +D Y + S
Sbjct: 184 DPDGFTFTFLLKGRSRMRIDLPLIVASDEIHGAGV--DYDKYKTLKSYISNKVMHMLPTS 241
Query: 246 --LVSMYARC-------------------------------------NCMNSAYHVFNSL 266
L SM C C++ A +F+ +
Sbjct: 242 QSLASMAEACLAMQALKLIHARAFRANLHNHALVLAKIFRFAAVSPNGCLHYADRLFSQI 301
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGA 326
P+ ++ LI GYS+ +++ F ++ D +L ++ P
Sbjct: 302 HQPNTFFYNTLIRGYSKSSSPSQSVQLFNQMRRNCVDPDGFTFTFLLKGRSRMRIDLPLI 361
Query: 327 V----IHGYVIQHGFELSVMVSSALVDMYS------------------------------ 352
V IHG V++ GF + V +AL+ +Y+
Sbjct: 362 VASDEIHGAVLKLGFCFHLFVMNALIHLYAARGVPAAAHQVFNEMVGADVVSWSGLVVAH 421
Query: 353 -KCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+ G L L QVF+ M ER+++++ ++ G + +A E FR++ + G+ PDE
Sbjct: 422 VRAGELELARQVFDEMPERDVVSWTVMVSGYAQAKRSREALELFREMRDVGVRPDEVAMV 481
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
++ AC G + G E+ R +E G ++ + G ++ A+ ++ +
Sbjct: 482 IVISACTSLGDLETGFEVH-RYIDENGFGWMVSLCNALIDMYAKCGCMDLAWQVFNNMER 540
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPR-KGAYKVMLSNTYAEDGRWDD 527
+++S C +GN++ A V + + R G + L Y G DD
Sbjct: 541 K-SLITWNSMISACANHGNAEDAFRVFTLMLXSGIRPDGVTFLALLTAYTHKGWVDD 596
>gi|15228257|ref|NP_188283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274288|sp|Q9LUS3.1|PP237_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16610
gi|11994615|dbj|BAB02752.1| selenium-binding protein-like [Arabidopsis thaliana]
gi|332642322|gb|AEE75843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 259 bits (661), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 166/550 (30%), Positives = 280/550 (50%), Gaps = 13/550 (2%)
Query: 8 LVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
VL+ +++ K +H+ V + D + T LV YA L A +FD+ P+R
Sbjct: 108 FVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKR 167
Query: 68 SVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRFV 126
+ WN++I ++L D LF ++ R L P+ T + A L + V
Sbjct: 168 DMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAV 227
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
HG G D + + ++ Y+K I A +VFD + V ++MI G+
Sbjct: 228 HGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMI 287
Query: 187 DKSLQLFDWMLRLGKTPDEYTLV-----GLI-SGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
++ ++F ML D +V GLI G LS G+ +H + +K+ F
Sbjct: 288 KEAGEVFFQML----VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDL 343
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V + ++S YA+ + A+ F+ + D++++++LITG ++ F ++
Sbjct: 344 TVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS 403
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G + D + VL A + A + G+ HGY + HG+ ++ + +AL+DMY+KCG L +
Sbjct: 404 GIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVA 463
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+VF+TM +R+I+++N+++ G G+HG +A F + E G+NPDE T A+L AC H
Sbjct: 464 KRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHS 523
Query: 421 GLVNDGREIFTRMTE-EYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSG 479
GLV++G+++F M+ ++ + + +HY M LL AG L+EAY F+ +P D V G
Sbjct: 524 GLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLG 583
Query: 480 ALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNG 539
LLS C Y N++L V+ ++ ++ V+LSNTY+ RW+D ++R G
Sbjct: 584 TLLSACWTYKNAELGNEVSKKM-QSLGETTESLVLLSNTYSAAERWEDAARIRMIQKKRG 642
Query: 540 LRKEAGVSWV 549
L K G SWV
Sbjct: 643 LLKTPGYSWV 652
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 128/426 (30%), Positives = 214/426 (50%), Gaps = 12/426 (2%)
Query: 1 MFFNLHFLVLELSKSHQSLSRTKELHALVAKASL-LRDPFYATKLVRLYALNNVLPSARI 59
MF +L LE ++L + +H + K SL L L RLYA N + AR
Sbjct: 1 MFLSL----LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARH 56
Query: 60 LFDKTPQRSV--FLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN 117
+FD+ P + W+ +IRAYA A L+ +L + ++P +TY + +AC+
Sbjct: 57 VFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGL 116
Query: 118 SDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMI 177
+ + +H S D +ALV Y+K ++ AIKVFD + D+V N+MI
Sbjct: 117 RAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 178 SGFA-HCGFWDKSLQLFDWMLRL-GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSS 235
SGF+ HC D + LF M R+ G +P+ T+VG+ L L G+ +HG+C +
Sbjct: 177 SGFSLHCCLTD-VIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMG 235
Query: 236 FDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKA--LYY 293
F + V + ++ +YA+ C+ A VF+ F + VTWSA+I GY + +A +++
Sbjct: 236 FSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFF 295
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
+N PV I +L A+ ++ G +H Y ++ GF L + V + ++ Y+K
Sbjct: 296 QMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAK 355
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
G L + F + +++I+YNS+I G ++ ++F F ++ G+ PD +T +
Sbjct: 356 YGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGV 415
Query: 414 LCACCH 419
L AC H
Sbjct: 416 LTACSH 421
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 7/230 (3%)
Query: 221 LSVGQGIHGFCLKSSFD-SYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDL--VTWSAL 277
L +GQ IH LK S S V L +YA CN + A HVF+ + HP + + W +
Sbjct: 15 LVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLM 74
Query: 278 ITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF 337
I Y+ KAL + K+ G + VL A A + G +IH +V F
Sbjct: 75 IRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDF 134
Query: 338 ELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRD 397
+ V +ALVD Y+KCG L + I+VF+ M +R+++ +N++I G LH F D
Sbjct: 135 ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLD 194
Query: 398 IIE-KGLNPDESTFSALLCACCHGGLVNDGREIF---TRMTEEYGIQAKT 443
+ GL+P+ ST + A G + +G+ + TRM + KT
Sbjct: 195 MRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
>gi|302143938|emb|CBI23043.3| unnamed protein product [Vitis vinifera]
Length = 539
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/490 (31%), Positives = 253/490 (51%), Gaps = 21/490 (4%)
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
W+++I +A +A L + +P+ T A + AC+ +L + +HG
Sbjct: 14 WSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGKEIHGYVT 73
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
G + + LV Y + + + A+K+F G S ++V N+MI G+ G +K+ +
Sbjct: 74 RHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENGNVEKAKE 133
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS-------S 244
LFD M +GK D + +ISG + +LL LK++ ++D V+ +
Sbjct: 134 LFDQMELVGK--DTISWNSMISG-YADNLLKCED------LKAAQLAFDGVTERDTATWN 184
Query: 245 VLVSMYARCNCMNSAYHVFNSL----FHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
VL+S YA CN + + ++ + F P++ TW+ +I+G+ + G AL F ++
Sbjct: 185 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 244
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
+ D + +L A A+ A + G +H + I+ G+EL V + +ALVDMY+KCG +
Sbjct: 245 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHA 304
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHG 420
+QV+ +S N+++ N+++ +HG + FR+++ G PD TF ++L +C H
Sbjct: 305 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA 364
Query: 421 GLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
G V G E F MT Y + +HY +V LL AG L+EAY + +P+ D + GA
Sbjct: 365 GAVETGHEFFDLMT-YYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGA 423
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LL C I+GN +L EI A L E +P V+L+N YA GRW D+ + R I D G+
Sbjct: 424 LLGGCVIWGNVELGEIAAESLIELEPNNTGNYVLLANLYAYAGRWHDLDRTRQMIKDRGM 483
Query: 541 RKEAGVSWVS 550
K G SW+
Sbjct: 484 HKSPGCSWIE 493
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 165/362 (45%), Gaps = 14/362 (3%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
Q+L+ KE+H V + + +PF LV +Y + SA +F ++V +N++I
Sbjct: 60 QNLNLGKEIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMI 119
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSEN----SDLPGLRFVHGGAIV 132
Y AK LF + + D ++ + ++N DL + G
Sbjct: 120 VGYCENGNVEKAKELFDQM--ELVGKDTISWNSMISGYADNLLKCEDLKAAQLAFDGVT- 176
Query: 133 SGLGRDSITSSALVTAYS---KLSLIDEAIKVFDGVS-DPDLVLCNSMISGFAHCGFWDK 188
RD+ T + L++ Y+ +L I I+ G +P++ N +ISG G +
Sbjct: 177 ---ERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNEL 233
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L+LF M PD YT+ ++ + ++ G+ +H ++ ++ ++ + LV
Sbjct: 234 ALRLFTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVD 293
Query: 249 MYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVL 308
MYA+C + A V+N + +P+LV+ +A++T Y+ G + + FR + G + D V
Sbjct: 294 MYAKCGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVT 353
Query: 309 IASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMS 368
SVL++ + V G + + S+ + +VD+ S+ G L ++ + +
Sbjct: 354 FLSVLSSCVHAGAVETGHEFFDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIP 413
Query: 369 ER 370
+
Sbjct: 414 RK 415
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 145/331 (43%), Gaps = 8/331 (2%)
Query: 166 SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ 225
S P+LV +++I GFA G+ ++L+L M G P+ TL ++ L++G+
Sbjct: 7 SKPNLVSWSAVIGGFAQNGYDKEALELLCRMQAAGFEPNARTLASVLPACARLQNLNLGK 66
Query: 226 GIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQG 285
IHG+ + F S +V + LV +Y RC M SA +F+ ++V+++ +I GY + G
Sbjct: 67 EIHGYVTRHGFMSNPFVVNGLVDVYRRCADMGSALKIFSGFSVKNVVSYNTMIVGYCENG 126
Query: 286 DYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSS 345
+ KA F ++ + GK D + S+++ A + E +
Sbjct: 127 NVEKAKELFDQMELVGK--DTISWNSMISGYADNLLKCEDLKAAQLAFDGVTERDTATWN 184
Query: 346 ALVDMYSKCGYLGLGIQVFETMS----ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEK 401
L+ Y+ C L + + M E N+ T+N +I G +G A F ++
Sbjct: 185 VLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRLFTEMQTS 244
Query: 402 GLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEE 461
L PD T +L AC + G+++ + G + +V + G+++
Sbjct: 245 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQ-GYELDVHIGAALVDMYAKCGSIKH 303
Query: 462 AYSFIWSLPKPVDPAVSGALLSCCHIYGNSD 492
A + P + A+L+ ++G+ D
Sbjct: 304 AMQVYNRISNP-NLVSQNAMLTAYAMHGHGD 333
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 117/258 (45%), Gaps = 21/258 (8%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTP----QRSVFLWNSIIRAYALAHRFNDAKSL 91
RD L+ YA N L + + L K + +V+ WN II + A L
Sbjct: 178 RDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISGHVENGHNELALRL 237
Query: 92 FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSK 151
F + + L+PD +T I AC+ + + + VH +I G D +ALV Y+K
Sbjct: 238 FTEMQTSSLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAK 297
Query: 152 LSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGL 211
I A++V++ +S+P+LV N+M++ +A G D+ + LF ML G PD T + +
Sbjct: 298 CGSIKHAMQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSV 357
Query: 212 ISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVS--------SVLVSMYARCNCMNSAYHVF 263
+S + G H F FD Y + + +V + +R ++ AY +
Sbjct: 358 LSSCVHAGAVETG---HEF-----FDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELV 409
Query: 264 NSL-FHPDLVTWSALITG 280
+ PD V W AL+ G
Sbjct: 410 KKIPRKPDSVMWGALLGG 427
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 83/181 (45%), Gaps = 26/181 (14%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+++R K++HA + D LV +YA + A ++++ ++ N+++
Sbjct: 265 TIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHAMQVYNRISNPNLVSQNAMLT 324
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSG--- 134
AYA+ ++ +LF+N+L +PD+ T+ + +C VH GA+ +G
Sbjct: 325 AYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSC-----------VHAGAVETGHEF 373
Query: 135 ---LGRDSITSS-----ALVTAYSKLSLIDEAIKVFDGV-SDPDLVLCNSMISGFAHCGF 185
+ ++T S +V S+ +DEA ++ + PD V+ +++ G C
Sbjct: 374 FDLMTYYNVTPSLKHYTCIVDLLSRAGRLDEAYELVKKIPRKPDSVMWGALLGG---CVI 430
Query: 186 W 186
W
Sbjct: 431 W 431
>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
DEFECTIVE 2261; Flags: Precursor
gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 850
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 153/503 (30%), Positives = 258/503 (51%), Gaps = 7/503 (1%)
Query: 52 NVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACIT 111
N +A +FDK + +V W +I +A F +++ + + D FT + +
Sbjct: 217 NSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSL---IDEAIKVFDGVSDP 168
AC+E +L + +H AI SGL D +LV Y+K S +D+ KVFD + D
Sbjct: 277 SACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDH 334
Query: 169 DLVLCNSMISGF-AHCGFWDKSLQLFDWMLRLGKT-PDEYTLVGLISGLWEPSLLSVGQG 226
++ ++I+G+ +C +++ LF M+ G P+ +T S VG+
Sbjct: 335 SVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQ 394
Query: 227 IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGD 286
+ G K S V++ ++SM+ + + M A F SL +LV+++ + G + +
Sbjct: 395 VLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLN 454
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSA 346
+ +A ++ + AS+L+ A ++ G IH V++ G + V +A
Sbjct: 455 FEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNA 514
Query: 347 LVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPD 406
L+ MYSKCG + +VF M RN+I++ S+I G HGF + E F +IE+G+ P+
Sbjct: 515 LISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPN 574
Query: 407 ESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI 466
E T+ A+L AC H GLV++G F M E++ I+ K EHY MV LL AG L +A+ FI
Sbjct: 575 EVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFI 634
Query: 467 WSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWD 526
++P D V L C ++ N++L ++ A ++ E DP + A + LSN YA G+W+
Sbjct: 635 NTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWE 694
Query: 527 DVMKLRDDIVDNGLRKEAGVSWV 549
+ ++R + + L KE G SW+
Sbjct: 695 ESTEMRRKMKERNLVKEGGCSWI 717
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 173/334 (51%), Gaps = 13/334 (3%)
Query: 95 LLRTQLKP-DNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLS 153
+ R ++P D+ T++ + ++C D + VH I + DS+ ++L++ YSK
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 154 LIDEAIKVFDGV---SDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
+A VF+ + D+V ++M++ + + G ++++F L LG P++Y
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 211 LISGLWEPSLLSVGQGIHGFCLKSS-FDSYDYVSSVLVSMYARC-NCMNSAYHVFNSLFH 268
+I + VG+ GF +K+ F+S V L+ M+ + N +AY VF+ +
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 269 PDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVI 328
++VTW+ +IT Q G +A+ +F + + G ++D ++SV +A A+ N+ G +
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 329 HGYVIQHGFELSVMVSSALVDMYSKC---GYLGLGIQVFETMSERNIITYNSVILG-LGL 384
H + I+ G L V +LVDMY+KC G + +VF+ M + +++++ ++I G +
Sbjct: 292 HSWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 385 HGFTYQAFEFFRDIIEKG-LNPDESTFSALLCAC 417
+A F ++I +G + P+ TFS+ AC
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 115/262 (43%), Gaps = 10/262 (3%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++ K L + A ++ ++ ++ + A+ F+ ++++ +N+ +
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRN 452
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
F A L + +L FT+A + + + +H + GL +
Sbjct: 453 LNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC 512
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+AL++ YSK ID A +VF+ + + +++ SMI+GFA GF + L+ F+ M+ G
Sbjct: 513 NALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVK 572
Query: 203 PDEYTLVGLISGLWEPSLLSVG-----QGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
P+E T V ++S L+S G +K + Y + +V + R +
Sbjct: 573 PNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHY----ACMVDLLCRAGLLT 628
Query: 258 SAYHVFNSL-FHPDLVTWSALI 278
A+ N++ F D++ W +
Sbjct: 629 DAFEFINTMPFQADVLVWRTFL 650
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 85/174 (48%), Gaps = 11/174 (6%)
Query: 277 LITGYSQQGDYGKALYYFRKLNMQG-KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH 335
LI + GD A+ + G + D V +S+L + ++ + G ++H +I+
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 336 GFELSVMVSSALVDMYSKCGYLGLGIQVFETM---SERNIITYNSVILGLGLHGFTYQAF 392
E ++ ++L+ +YSK G VFETM +R+++++++++ G +G A
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAI 151
Query: 393 EFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHY 446
+ F + +E GL P++ ++A++ AC + V GR G KT H+
Sbjct: 152 KVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTL-------GFLMKTGHF 198
>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
[Vitis vinifera]
Length = 799
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 168/572 (29%), Positives = 272/572 (47%), Gaps = 78/572 (13%)
Query: 57 ARILFDKTPQ--RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRAC 114
AR +F TP R +N++I Y+ + A LF++LLR +PDNFT+ + A
Sbjct: 100 AREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTSVLGAL 159
Query: 115 SE-NSDLPGLRFVHGGAIVSGLG------------------------------------- 136
+ D + +H + SG G
Sbjct: 160 ALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMAAARKLFDE 219
Query: 137 ---RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLF 193
RD ++ + ++ Y + +D A + DG+++ +V N+MISG+ H GF+ ++L++F
Sbjct: 220 MTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMF 279
Query: 194 DWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKS----SFDSYDYVSSVLVSM 249
M LG DE+T ++S G+ +H + L++ S D V++ L ++
Sbjct: 280 RKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLSVNNALATL 339
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKL------------ 297
Y +C ++ A VFN + DLV+W+A+++GY G +A +F ++
Sbjct: 340 YWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTVMI 399
Query: 298 -----------------NMQGKKADPV--LIASVLAAAAKSANVWPGAVIHGYVIQHGFE 338
M+ + +P A + A A A + G +H +++ GF+
Sbjct: 400 SGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVRLGFD 459
Query: 339 LSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDI 398
S+ +AL+ MY+KCG + +F TM + +++N++I LG HG QA E F +
Sbjct: 460 SSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELFELM 519
Query: 399 IEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGN 458
+++ + PD TF +L C H GLV +G F M+ YGI +HY M+ LL AG
Sbjct: 520 LKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGICPGEDHYARMIDLLCRAGK 579
Query: 459 LEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNT 518
EA I ++P P + ALL+ C I+GN DL A +LFE P+ V+LSN
Sbjct: 580 FSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGIQAAERLFELMPQHDGTYVLLSNM 639
Query: 519 YAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
YA GRWDDV K+R + D G++KE G SW+
Sbjct: 640 YATVGRWDDVAKVRKLMRDKGVKKEPGCSWIE 671
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 173/397 (43%), Gaps = 55/397 (13%)
Query: 36 RDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNL 95
RD T ++ Y N L +AR D ++ V WN++I Y F +A +F+ +
Sbjct: 223 RDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGFFLEALEMFRKM 282
Query: 96 LRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSS---------ALV 146
++ D FTY + AC+ N+ F+HG + + + R S AL
Sbjct: 283 YLLGIQWDEFTYTSVLSACA-NAGF----FLHGKQVHAYILRTEPRPSLDFSLSVNNALA 337
Query: 147 TAYSKLSLIDEAIKVFDGVSDPDLVLCNS------------------------------- 175
T Y K +DEA +VF+ + DLV N+
Sbjct: 338 TLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTWTV 397
Query: 176 MISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG-LISGLWEPSLLSVGQGIHGFCLKS 234
MISG A GF ++SL+LF+ M G P +Y G +I+ W +L+ G+ +H ++
Sbjct: 398 MISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMH-GRQLHAQLVRL 456
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYF 294
FDS + L++MYA+C + +A+ +F ++ + D V+W+A+I Q G +AL F
Sbjct: 457 GFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALELF 516
Query: 295 RKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ----HGFELSVMVSSALVDM 350
+ + D + +VL+ + + V G H Y +G + ++D+
Sbjct: 517 ELMLKEDILPDRITFLTVLSTCSHAGLVEEG---HRYFKSMSGLYGICPGEDHYARMIDL 573
Query: 351 YSKCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHG 386
+ G + ETM E + +++ G +HG
Sbjct: 574 LCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHG 610
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 180/459 (39%), Gaps = 116/459 (25%)
Query: 124 RFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV------------ 171
R VH I SG + L+ Y K S + A +FD + PD+V
Sbjct: 35 RTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTLIAAHSSA 94
Query: 172 --------------------LC-NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
+C N+MI+G++H +++LF +LR G PD +T
Sbjct: 95 GNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRPDNFTFTS 154
Query: 211 LISGLWEPSLL----SVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC---------NCMN 257
++ L +L+ Q IH +KS V + L+S++ +C + M
Sbjct: 155 VLGAL---ALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSSSLMA 211
Query: 258 SAYHVFNSLFHPD-------------------------------LVTWSALITGYSQQGD 286
+A +F+ + D +V W+A+I+GY G
Sbjct: 212 AARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYVHHGF 271
Query: 287 YGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQH----GFELSVM 342
+ +AL FRK+ + G + D SVL+A A + G +H Y+++ + S+
Sbjct: 272 FLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLDFSLS 331
Query: 343 VSSALVDMYSKCGYLGLGIQV-------------------------------FETMSERN 371
V++AL +Y KCG + QV FE M ERN
Sbjct: 332 VNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERN 391
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++T+ +I GL +GF ++ + F + +G P + F+ + AC + GR++
Sbjct: 392 LLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHA 451
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLP 470
++ G + ++ + G +E A+ ++P
Sbjct: 452 QLV-RLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMP 489
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 156/404 (38%), Gaps = 87/404 (21%)
Query: 218 PSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVT---- 273
P S+ + +H + S F Y+ + L+ +Y + + + SA+H+F+ + PD+V
Sbjct: 28 PMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLFDEIRQPDIVARTTL 87
Query: 274 -----------------------------WSALITGYSQQGDYGKALYYFRKLNMQGKKA 304
++A+ITGYS D A+ FR L G +
Sbjct: 88 IAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGAIELFRDLLRNGFRP 147
Query: 305 DPVLIASVLAA-AAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKC--------- 354
D SVL A A + IH V++ G V +AL+ ++ KC
Sbjct: 148 DNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALLSVFVKCASSPLVSSS 207
Query: 355 -------------------------------GYLGLGIQVFETMSERNIITYNSVILGLG 383
G L Q + M+E+ ++ +N++I G
Sbjct: 208 SLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMTEKLVVAWNAMISGYV 267
Query: 384 LHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT---RMTEEYGIQ 440
HGF +A E FR + G+ DE T++++L AC + G G+++ R +
Sbjct: 268 HHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPSLD 327
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS-GALLSCCHIYGNSDLAEIVAH 499
+ L G ++EA + PV VS A+LS G D A+
Sbjct: 328 FSLSVNNALATLYWKCGKVDEARQVFNQM--PVKDLVSWNAILSGYVNAGRIDEAK---- 381
Query: 500 QLFENDPRKG--AYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLR 541
FE P + + VM+S A++G ++ +KL + + G
Sbjct: 382 SFFEEMPERNLLTWTVMISG-LAQNGFGEESLKLFNRMKSEGFE 424
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 45/282 (15%)
Query: 44 LVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQL--- 100
L LY + AR +F++ P + + WN+I+ Y A R ++AKS F+ + L
Sbjct: 336 LATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYVNAGRIDEAKSFFEEMPERNLLTW 395
Query: 101 ----------------------------KPDNFTYACITRACSENSDLPGLRFVHGGAIV 132
+P ++ +A AC+ + L R +H +
Sbjct: 396 TVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALMHGRQLHAQLVR 455
Query: 133 SGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G +AL+T Y+K +++ A +F + D V N+MI+ G ++L+L
Sbjct: 456 LGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIAALGQHGHGAQALEL 515
Query: 193 FDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQ-------GIHGFCLKSSFDSYDYVSSV 245
F+ ML+ PD T + ++S L+ G G++G C D Y +
Sbjct: 516 FELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFKSMSGLYGIC--PGEDHY----AR 569
Query: 246 LVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALITGYSQQGD 286
++ + R + A + ++ P W AL+ G G+
Sbjct: 570 MIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGN 611
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 42/98 (42%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L ++LHA + + L+ +YA V+ +A LF P WN++I
Sbjct: 442 ALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLDSVSWNAMIA 501
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
A A LF+ +L+ + PD T+ + CS
Sbjct: 502 ALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCS 539
>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
Length = 640
Score = 259 bits (661), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 152/462 (32%), Positives = 243/462 (52%), Gaps = 40/462 (8%)
Query: 131 IVSGLGRDSITSSALVTAYSKLSLI--DEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDK 188
I++G D+ +S L+ + I D ++++FD + + + + N+M+ + +K
Sbjct: 53 ILTGFISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEK 112
Query: 189 SLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVS 248
+L L+ M++ PD YT ++ L G+ IH LK FDS YV + L++
Sbjct: 113 ALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLIN 172
Query: 249 MYARCNCMN----------------------------------SAYHVFNSLFHPDLVTW 274
MYA C M A+ +FN + D+V+W
Sbjct: 173 MYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSW 232
Query: 275 SALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ 334
SALI+GY Q G Y +AL F ++N G + D V++ SVL+A A + V G +IHG VI+
Sbjct: 233 SALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIR 292
Query: 335 HGFELSVMVSSALV----DMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQ 390
G E V + +AL+ DMY KCG + ++VF M E+ + ++N++I+GL ++G +
Sbjct: 293 MGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER 352
Query: 391 AFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMV 450
+ + F ++ G+ P+E TF +L AC H GLV++GR F M E++GI+ +HY MV
Sbjct: 353 SLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMV 412
Query: 451 KLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGA 510
LLG AG L EA I S+P D A GALL C +G++++ E V +L E P
Sbjct: 413 DLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDG 472
Query: 511 YKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGS 552
+ V+LSN +A G W+DV+++R + G+ K G S + +
Sbjct: 473 FHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEAN 514
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 191/423 (45%), Gaps = 44/423 (10%)
Query: 34 LLRDPFYATKLVRLYALNNV--LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSL 91
+ D F A++L++ + L + +FD+ + F+WN+++RAY ++ A L
Sbjct: 57 FISDTFAASRLLKFSTDSPFIGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLL 116
Query: 92 FKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS- 150
+K +++ + PDN+TY + +AC+ G + +H + G D + L+ Y+
Sbjct: 117 YKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAV 176
Query: 151 ---------------------------------KLSLIDEAIKVFDGVSDPDLVLCNSMI 177
+ + EA K+F+ + + D+V +++I
Sbjct: 177 CGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALI 236
Query: 178 SGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD 237
SG+ G ++++L +F M G DE +V ++S S++ G+ IHG ++ +
Sbjct: 237 SGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIE 296
Query: 238 SYDYVSSVLVSMYA----RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYY 293
SY + + L+ MY+ +C C+ +A VFN + + +W+ALI G + G ++L
Sbjct: 297 SYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDM 356
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYS 352
F ++ G + + VL A V G +I+ HG E +V +VD+
Sbjct: 357 FSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLG 416
Query: 353 KCGYLGLGIQVFETMS-ERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+ G L ++ E+M ++ T+ +++ HG T R +IE L PD F
Sbjct: 417 RAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIE--LQPDHDGFH 474
Query: 412 ALL 414
LL
Sbjct: 475 VLL 477
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 145/360 (40%), Gaps = 53/360 (14%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTP----------------- 65
KE+H V K D + L+ +YA+ + AR LFD++P
Sbjct: 149 KEIHDHVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKK 208
Query: 66 -----------------QRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYA 108
++ + W+++I Y + +A +F + ++ D
Sbjct: 209 GDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVV 268
Query: 109 CITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS----KLSLIDEAIKVFDG 164
+ AC+ S + + +HG I G+ +AL+ YS K ++ A++VF+G
Sbjct: 269 SVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNG 328
Query: 165 VSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVG 224
+ + + N++I G A G ++SL +F M G P+E T +G++ L+ G
Sbjct: 329 MEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEG 388
Query: 225 QG-----IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSL-FHPDLVTWSALI 278
+ I ++ + Y +V + R +N A + S+ PD+ TW AL+
Sbjct: 389 RCHFASMIEKHGIEPNVKHY----GCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALL 444
Query: 279 TGYSQQGDYGKALYYFRKLNMQGKKAD--PVLIASVLAAAAKSANVWPGAVIHGYVIQHG 336
+ GD RKL D VL++++ A+ +V + G + Q G
Sbjct: 445 GACKKHGDTEMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLE---VRGMMKQQG 501
>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g33760-like [Cucumis sativus]
Length = 663
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 143/431 (33%), Positives = 237/431 (54%), Gaps = 1/431 (0%)
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
L L+ VH IVSGL R + L++ I A ++F V +PD L +S++
Sbjct: 104 LRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFLFDSLLKV 163
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ GF ++ + ML G YT +I + S L +G+ IH + + S
Sbjct: 164 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 223
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
YV + L+++YA+ + M A VF+++ ++ W++LI+GY Q G +++ F +
Sbjct: 224 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 283
Query: 300 QGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGL 359
G + D I S+L++ ++ + G +H Y +GF+L+V++ ++L++MY++CG +
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 343
Query: 360 GIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCH 419
+VF++M ERN++T+ ++I G G+HG+ QA E F ++ G P+ TF A+L AC H
Sbjct: 344 AREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAH 403
Query: 420 GGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWS-LPKPVDPAVS 478
GL++DGR +F+ M E YG+ EH + MV + G AG L +AY FI +PK PAV
Sbjct: 404 SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVW 463
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDN 538
++L C ++ N DL VA + +P + VMLSN YA GR D V +R+ +
Sbjct: 464 TSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 523
Query: 539 GLRKEAGVSWV 549
L+K+ G S +
Sbjct: 524 RLKKQVGYSTI 534
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 208/454 (45%), Gaps = 42/454 (9%)
Query: 12 LSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFL 71
L +S L +++HA + + L R TKL+ L + AR LF P FL
Sbjct: 97 LLRSGPRLRNLQQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNPDSFL 156
Query: 72 WNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAI 131
++S+++ + D ++ +L + N+T+ + +AC++ S L + +H +
Sbjct: 157 FDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVM 216
Query: 132 VSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQ 191
V G G D +AL+ Y+K S + A KVFD + ++ NS+ISG+ G +S+
Sbjct: 217 VCGYGSDMYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIG 276
Query: 192 LFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYA 251
LF M+ G PD T+V L+S + L G +H + + FD + + L++MY
Sbjct: 277 LFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYT 336
Query: 252 RCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIAS 311
RC ++ A VF+S+ ++VTW+A+I+GY G +A+ F ++ G + + + +
Sbjct: 337 RCGNVSKAREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVA 396
Query: 312 VLAAAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSER 370
VL+A A S + G + + + +G V + +VDM+ + G L
Sbjct: 397 VLSACAHSGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLN------------ 444
Query: 371 NIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIF 430
A++F + I K P + ++++L AC + G ++
Sbjct: 445 -------------------DAYQFIKKFIPK--EPGPAVWTSMLGACRMHRNFDLGVKV- 482
Query: 431 TRMTEEYGIQAKTE---HYIYMVKLLGLAGNLEE 461
E+ + + E HY+ + + LAG ++
Sbjct: 483 ----AEHVLSVEPENPGHYVMLSNIYALAGRMDR 512
>gi|356534169|ref|XP_003535630.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g38010-like [Glycine max]
Length = 595
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/553 (29%), Positives = 282/553 (50%), Gaps = 12/553 (2%)
Query: 4 NLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYA--LNNVLPSARILF 61
+L +++L+L L K++HA + ++L+ + TK + +V L
Sbjct: 7 SLKWVLLDLIHKCNDLRSFKQIHAHLLTSALVTNDLVVTKAANFLGKHITDVHYPCNFLK 66
Query: 62 DKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
S F N +I YA A +++ +R PD +T+ + ++C++ S +
Sbjct: 67 QFDWSLSSFPCNLLISGYASGQLPWLAILIYRWTVRNGFVPDVYTFPAVLKSCAKFSGIG 126
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+R H ++ +GL D + LV YS A KVF+ + D+V +ISG+
Sbjct: 127 EVRQFHSVSVKTGLWCDIYVQNTLVHVYSICGDNVGAGKVFEDMLVRDVVSWTGLISGYV 186
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDY 241
G +++++ LF LR+ P+ T V ++ + L++G+GIHG K +
Sbjct: 187 KTGLFNEAISLF---LRMNVEPNVGTFVSILGACGKLGRLNLGKGIHGLVFKCLYGEELV 243
Query: 242 VSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQG 301
V + ++ MY +C+ + A +F+ + D+++W+++I G Q ++L F ++ G
Sbjct: 244 VCNAVLDMYMKCDSVTDARKMFDEMPEKDIISWTSMIGGLVQCQSPRESLDLFSQMQASG 303
Query: 302 KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGI 361
+ D V++ SVL+A A + G +H Y+ H + V + + LVDMY+KCG + +
Sbjct: 304 FEPDGVILTSVLSACASLGLLDCGRWVHEYIDCHRIKWDVHIGTTLVDMYAKCGCIDMAQ 363
Query: 362 QVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGG 421
++F M +NI T+N+ I GL ++G+ +A + F D++E G P+E TF A+ ACCH G
Sbjct: 364 RIFNGMPSKNIRTWNAYIGGLAINGYGKEALKQFEDLVESGTRPNEVTFLAVFTACCHNG 423
Query: 422 LVNDGREIFTRMTEE-YGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGA 480
LV++GR+ F MT Y + EHY MV LL AG + EA I ++P P D + GA
Sbjct: 424 LVDEGRKYFNEMTSPLYNLSPCLEHYGCMVDLLCRAGLVGEAVELIKTMPMPPDVQILGA 483
Query: 481 LLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGL 540
LLS + YGN + + L + + V+LSN YA + +W +V +R L
Sbjct: 484 LLSSRNTYGNVGFTQEMLKSLPNVEFQDSGIYVLLSNLYATNKKWAEVRSVRR------L 537
Query: 541 RKEAGVSWVSGSS 553
K+ G+S GSS
Sbjct: 538 MKQKGISKAPGSS 550
>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 687
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 265/537 (49%), Gaps = 4/537 (0%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
LS K +HA V +A+ D L+ LY L AR +FD P R+ N ++
Sbjct: 31 ELSLGKAVHARVVRAARF-DVVQYNNLIALYVKCGRLGLARQVFDAMPSRNPVSGNLLMS 89
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
YA + R DA +L + + + + A + R HG AI +GL
Sbjct: 90 GYASSGRHRDALALLR---VADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAE 146
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWML 197
SA++ Y + + +DEA+KVFD VS ++ NSMI+GF G D S + M+
Sbjct: 147 HPYVCSAVLHMYCQCAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMV 206
Query: 198 RLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMN 257
R D + V ++ + +G +H LK + YV S LV MY +C+ +
Sbjct: 207 RNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFPH 266
Query: 258 SAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAA 317
A VF L ++V+W+A++T Y+Q + AL F + M+G + + A L + A
Sbjct: 267 EANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAVALNSCA 326
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
A + G + ++ G + V +AL++MYSK G + +VF +M R+++++NS
Sbjct: 327 GLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRDVVSWNS 386
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEY 437
+I+G HG +A E F D++ P TF +L AC GLV++G M +E
Sbjct: 387 IIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLNIMMKEV 446
Query: 438 GIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIV 497
G++ EHY MV LL G L+EA FI S D +LLS C +Y N L V
Sbjct: 447 GVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNYGLGHRV 506
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
A Q+F+ P+ V+LSN YA+ RWD V+K+R + + G+RKE GVSW+ S
Sbjct: 507 AEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQVGSE 563
>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49710-like [Glycine max]
Length = 722
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 165/539 (30%), Positives = 272/539 (50%), Gaps = 10/539 (1%)
Query: 20 SRTKELHALVAKASLLRDP--FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
S+ LH L + P F L+ YA ++++ AR +FD+ PQ + +N++I
Sbjct: 55 SKCGSLHNAQTSFHLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIA 114
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGR 137
AYA LF+ + +L D FT + + AC ++ L +R +H +V G
Sbjct: 115 AYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGDDVGL--VRQLHCFVVVCGHDC 172
Query: 138 DSITSSALVTAYSKLSLIDEAIKVFDGVSD---PDLVLCNSMISGFAHCGFWDKSLQLFD 194
+ ++A++ YS+ + EA +VF + + D V N+MI +++ LF
Sbjct: 173 YASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFR 232
Query: 195 WMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC- 253
M+R G D +T+ +++ L G+ HG +KS F +V S L+ +Y++C
Sbjct: 233 EMVRRGLKVDMFTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCA 292
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK-ALYYFRKLNMQGKKADPVLIASV 312
M VF + PDLV W+ +I+G+S D + L+ FR++ G + D V
Sbjct: 293 GSMVECRKVFEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCV 352
Query: 313 LAAAAKSANVWPGAVIHGYVIQHGFELS-VMVSSALVDMYSKCGYLGLGIQVFETMSERN 371
+A + ++ G +H I+ + V V++ALV MYSKCG + +VF+TM E N
Sbjct: 353 TSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHN 412
Query: 372 IITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFT 431
++ NS+I G HG ++ F ++EK + P+ TF A+L AC H G V +G++ F
Sbjct: 413 TVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFN 472
Query: 432 RMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNS 491
M E + I+ + EHY M+ LLG AG L+EA I ++P LL C +GN
Sbjct: 473 MMKERFCIEPEAEHYSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNV 532
Query: 492 DLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVS 550
+LA A++ +P A VMLSN YA RW++ ++ + + G++K+ G SW+
Sbjct: 533 ELAVKAANEFLRLEPYNAAPYVMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIE 591
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 105/230 (45%), Gaps = 36/230 (15%)
Query: 221 LSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA---YH---------------- 261
L G+ +H KS Y+S+ +Y++C +++A +H
Sbjct: 25 LITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLTQYPNVFSYNTLINA 84
Query: 262 ------------VFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
VF+ + PD+V+++ LI Y+ +G+ G L F ++ D +
Sbjct: 85 YAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTL 144
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
+ V+ A + +H +V+ G + V++A++ YS+ G+L +VF M E
Sbjct: 145 SGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGE 202
Query: 370 ---RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
R+ +++N++I+ G H +A FR+++ +GL D T +++L A
Sbjct: 203 GGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTA 252
>gi|224141133|ref|XP_002323929.1| predicted protein [Populus trichocarpa]
gi|222866931|gb|EEF04062.1| predicted protein [Populus trichocarpa]
Length = 770
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 158/529 (29%), Positives = 272/529 (51%), Gaps = 9/529 (1%)
Query: 24 ELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
+LH+ + K + F L+ +Y+ L AR +F++ R + WN++I Y+
Sbjct: 185 QLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEG 244
Query: 84 RFN-DAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ +A S+F + R ++ D ++ AC +L R +HG +I + + S
Sbjct: 245 IYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVS 304
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
+ L++ Y K +I++A VF +++ ++V +MIS +++ F+ M G
Sbjct: 305 NVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDE-----AEAVSFFNEMRLDGVY 359
Query: 203 PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHV 262
P++ T VGLI + L+ G+ +HGFC K+ F S V + +++MYA+ M + V
Sbjct: 360 PNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKV 419
Query: 263 FNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAA--AAKSA 320
F L + D++ W+ALI+G+ G +A+ F + K + S+L A AA+
Sbjct: 420 FQELKYQDIIAWNALISGFVHNGLCQEAIRAFFS-GLIESKPNQYSFGSILNAIGAAEDV 478
Query: 321 NVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVIL 380
++ G H +I+ G +VSSAL+DMY+K G + +VF +++ + ++I
Sbjct: 479 SLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIIS 538
Query: 381 GLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGIQ 440
HG +F ++ + PD TF ++L AC G+V+ G +F M ++Y I+
Sbjct: 539 AYARHGDYESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVKDYQIE 598
Query: 441 AKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAHQ 500
EHY +V +LG AG LEEA + +P +V +LL C ++GN D+ E VA
Sbjct: 599 PSAEHYSCLVDMLGRAGRLEEAERLMSHIPGGPGLSVLQSLLGACRVHGNVDMGERVADA 658
Query: 501 LFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
L E +P + V++SN YAE G+W+ V K+R + G++KE G SWV
Sbjct: 659 LMEMEPTESGSYVLMSNLYAEIGKWEMVAKVRKRMRVKGVKKEVGFSWV 707
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 182/376 (48%), Gaps = 29/376 (7%)
Query: 57 ARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSE 116
A L DKTP R++ II+ + L+ N+ D FT A +AC
Sbjct: 35 AHNLLDKTPHRNLSF--QIIKEHLLSGFINNI--------------DEFTVANALKAC-R 77
Query: 117 NSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSM 176
L G + +HG +I+ +I S++L+ Y K +A+ +F+ ++ PD+V N++
Sbjct: 78 GYPLLGSQ-IHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTV 136
Query: 177 ISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE--PSLLSVGQGIHGFCLKS 234
+SG C + + M G D T ++S W + +G +H +K
Sbjct: 137 LSG---CQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKF 193
Query: 235 SFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYG-KALYY 293
FD +V + L+SMY+R + A VF + DLV+W+A+I+GYSQ+G YG +A+
Sbjct: 194 GFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISM 253
Query: 294 FRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSK 353
F ++ G + D + S ++A N+ IHG I+ E V VS+ L+ Y K
Sbjct: 254 FLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFK 313
Query: 354 CGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSAL 413
C + VF+ M+ERN++++ ++I +A FF ++ G+ P++ TF L
Sbjct: 314 CQVIEDARLVFQNMNERNVVSWTTMI-----SIDEAEAVSFFNEMRLDGVYPNDVTFVGL 368
Query: 414 LCACCHGGLVNDGREI 429
+ A G LV G+ +
Sbjct: 369 IHAITIGELVVQGKMV 384
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 159/344 (46%), Gaps = 9/344 (2%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
++L +++H L K + + L+ Y V+ AR++F +R+V W ++I
Sbjct: 280 KNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMI 339
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLG 136
+A S F + + P++ T+ + A + + + VHG +G
Sbjct: 340 SIDEA-----EAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFS 394
Query: 137 RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWM 196
S ++++T Y+K + +++KVF + D++ N++ISGF H G ++++ F
Sbjct: 395 SKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIRAFFSG 454
Query: 197 LRLGKTPDEYTLVGLIS--GLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCN 254
L + P++Y+ +++ G E L GQ H +K ++ VSS L+ MYA+
Sbjct: 455 L-IESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRG 513
Query: 255 CMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLA 314
+ + VF W+ +I+ Y++ GDY + +F ++ + D + S+L
Sbjct: 514 SICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNWFEEMRRLEVRPDSITFLSILT 573
Query: 315 AAAKSANVWPGAVIHGYVIQ-HGFELSVMVSSALVDMYSKCGYL 357
A + V G + G +++ + E S S LVDM + G L
Sbjct: 574 ACGRRGMVDMGCHLFGSMVKDYQIEPSAEHYSCLVDMLGRAGRL 617
>gi|115436506|ref|NP_001043011.1| Os01g0357800 [Oryza sativa Japonica Group]
gi|53791613|dbj|BAD52960.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|53792343|dbj|BAD53077.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532542|dbj|BAF04925.1| Os01g0357800 [Oryza sativa Japonica Group]
Length = 804
Score = 258 bits (660), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 161/545 (29%), Positives = 282/545 (51%), Gaps = 7/545 (1%)
Query: 9 VLELSKSHQSLSRTKELHAL-VAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQR 67
+L+++ + +L K LH + +A + D T +V Y SA + + +
Sbjct: 255 LLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQSAATVL-QNSKG 313
Query: 68 SVFLWNSIIRAYALA-HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFV 126
+V WN+++ A FN + L L ++ PD+ T+A + AC+E +
Sbjct: 314 TVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACAELCYFCFAASI 373
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H I + D + ++AL+ Y+K + + + +FD + D+V N+MI G+
Sbjct: 374 HAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNAMIYGYLQNDMA 433
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
+++ L ++M+ G PD T++ L++ + L G+ IHGF ++ F S V + +
Sbjct: 434 NEATSLLNYMMAEGVAPDFATVLSLLAAFADQRDLVRGRWIHGFAIRHGFCSDVDVENQI 493
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+ MY+ C + +A +F+SL +LV+W+A++ G G + + F+ + G+K D
Sbjct: 494 LYMYSACGKIAAARAIFDSLEKKNLVSWTAMMKGCLSNGHADEVVQLFQVMQKYGEKPDS 553
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
V + + + A + ++ IH +V + E + +++L+ Y+KCG L L +F +
Sbjct: 554 VSLVTAVQAVSDLGHLNGLKQIHCFVYRSLLEKDKITANSLISAYAKCGKLDLSAGLFFS 613
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ RN+ T+N++I +HGF E F+ + E+ + PDE TFS +L AC H GLV DG
Sbjct: 614 LKYRNLDTWNAMISAYAMHGFHINVLEMFKQMEEENIQPDELTFSTVLTACSHAGLVKDG 673
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCH 486
IF MT Y + + EHY MV LLG AG+LE+ Y FI + ALLS C
Sbjct: 674 WRIFNSMTSVYSVLPQEEHYGCMVDLLGRAGHLEDGYKFIKLSTLKDKSTIFCALLSACR 733
Query: 487 IYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDV--MKLRDDIVDNGLRKEA 544
+GN+ LA ++ +L E+ P+ ++S YA++G+W++V K R D+ +GL+K
Sbjct: 734 THGNTRLAHAISKELLEHGPQNPGIYALISEVYAQEGQWNEVANTKARADL--SGLKKHP 791
Query: 545 GVSWV 549
G S +
Sbjct: 792 GSSLI 796
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 197/399 (49%), Gaps = 7/399 (1%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K++HA V L D +K++ YA L +R++F K + LWNS + Y A
Sbjct: 65 KKIHANVFTHGLCWDVILGSKILSCYANLGALHESRLVFQKIVNDDISLWNSAMVDYFRA 124
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
+ L+K L Q+ + T + ++C+E +L + VH ++ L +
Sbjct: 125 GYPEEVIILYKRLKLNQIGFNGKTITFVMKSCTELKNLYLGKGVHADSLKLALSGNKFVG 184
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCG---FWDKSLQLFDWMLRL 199
S+L+ YSK S +++ VF+ + + D+V SMI+G++ W+ + ++ ML+
Sbjct: 185 SSLIGLYSKFSKTNDSRGVFEEIINKDIVAYTSMITGYSETVDSIAWN-AFEIATDMLQN 243
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFD-SYDYVSSVLVSMYARCNCMNS 258
+ TLV L+ L G+ +H + ++ + S D + + +V+ Y RC S
Sbjct: 244 NLEVNRVTLVSLLQIAGNLGALQEGKSLHCYSIRRAIGVSDDILETSIVNFYTRCGAYQS 303
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK-KADPVLIASVLAAAA 317
A V + + +W+AL++G ++ G A+ Y + + K D V A+VL+A A
Sbjct: 304 AATVLQN-SKGTVASWNALLSGLNRAGQSFNAIQYLPVMLHEHKVTPDSVTFANVLSACA 362
Query: 318 KSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNS 377
+ A IH Y I+ + V++++AL+++Y+KC + +F+ + +++++YN+
Sbjct: 363 ELCYFCFAASIHAYFIRRFIPMDVVLTTALIEVYTKCTRVMRSKYLFDQLIIKDVVSYNA 422
Query: 378 VILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCA 416
+I G + +A ++ +G+ PD +T +LL A
Sbjct: 423 MIYGYLQNDMANEATSLLNYMMAEGVAPDFATVLSLLAA 461
>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39680-like [Vitis vinifera]
Length = 703
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 165/548 (30%), Positives = 287/548 (52%), Gaps = 9/548 (1%)
Query: 9 VLELSKSHQSLSRTKELHA--LVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQ 66
+L++S ++L K +HA ++ + + L+ LYA + + ARILFD +
Sbjct: 31 LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVARILFDGMRK 90
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ-LKPDNFTYACITRACSENSDLPGLRF 125
R+V W +++ Y + LFK ++ ++P+ + +A I +CS++ +
Sbjct: 91 RNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGWQ 150
Query: 126 VHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGF 185
HG A+ SGL +AL+ YS+ S + A+ V+ V D+ N +I+G G+
Sbjct: 151 CHGYALKSGLVFHQYVKNALICMYSRRSDVKGAMSVWYEVPGLDVFSYNIIINGLLENGY 210
Query: 186 WDKSLQLFDWMLRLGKTPDEYTLV---GLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYV 242
++L++ D M+ D T V GL S L + L +G +H ++ + +V
Sbjct: 211 PSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKD---LRLGLQVHCRMFRTGAEYDSFV 267
Query: 243 SSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGK 302
SS ++ MY +C + +A VFN L ++V+W+A++ YSQ G + +AL +F ++ + G
Sbjct: 268 SSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVDGL 327
Query: 303 KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQ 362
+ A +L + A + + G ++H + + GFE ++V +AL++MYSK G + +
Sbjct: 328 LPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAAHK 387
Query: 363 VFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGL 422
VF M R+ IT++++I GL HG +A F++++ P TF +L AC H G
Sbjct: 388 VFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHLGS 447
Query: 423 VNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALL 482
V +G ++ ++ GI+ EHY +V LL AG L+EA +F+ S P D LL
Sbjct: 448 VQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRTLL 507
Query: 483 SCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRK 542
S CH++ N L + VA + + DP ++LSN YA+ RWD V+K+R + + ++K
Sbjct: 508 SACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNVKK 567
Query: 543 EAGVSWVS 550
E G SW+
Sbjct: 568 EPGASWIE 575
>gi|297819724|ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323583|gb|EFH54004.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 764
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/537 (31%), Positives = 268/537 (49%), Gaps = 11/537 (2%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHR 84
LH+ + K + T ++ +Y+ L SAR +F+ WN++I +
Sbjct: 134 LHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIFRNDK 193
Query: 85 FNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF-----VHGGAIVSGLGRDS 139
D LF+++L + + P FTY+ + ACS+ L R+ +H IVS + D
Sbjct: 194 IEDGLMLFRSMLMSGVDPTQFTYSMVLNACSK---LGSYRYSVGKLIHARMIVSDILADL 250
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+AL+ Y + EA VF + +P+LV NS+ISG + GF ++++ ++ +LR+
Sbjct: 251 PVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLRI 310
Query: 200 GKT-PDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
PDEYT I EP G+ +HG K ++ +V + L+SMY + S
Sbjct: 311 STPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAES 370
Query: 259 AYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAK 318
A VF + D+V W+ +I G S+ G+ A+ F ++ + + D ++SVL A +
Sbjct: 371 AQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACSD 430
Query: 319 SANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSV 378
A + G V H I+ GF+ + VS ALVDMY K G +F +S ++ +NS+
Sbjct: 431 MAMLRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSM 490
Query: 379 ILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYG 438
+ HG +A FF I+E G PD T+ +LL AC H G +G+ ++ +M E+ G
Sbjct: 491 LGAYSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQ-G 549
Query: 439 IQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA-VSGALLSCCHIYGNSDLAEIV 497
I A +HY MV L+ AG L EA I P + A + LLS C N +
Sbjct: 550 ITAGFKHYSCMVSLVSKAGLLGEALELIKQSPPENNQAELWRTLLSACVNARNLQIGLYA 609
Query: 498 AHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWVSGSSN 554
A Q+ + DP A ++LSN YA +GRW DV ++R I K+ G+SW+ ++N
Sbjct: 610 ADQILKLDPEDTATHILLSNLYAVNGRWKDVAEMRRKIRGLASAKDPGLSWIEVNNN 666
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 134/506 (26%), Positives = 244/506 (48%), Gaps = 12/506 (2%)
Query: 9 VLELSK---SHQSLSRTKELHALVAKA---SLLRDPFYATKLVRLYALNNVLPSARILFD 62
V+EL++ S +L R +LHA++ A S P+ L+ +Y L AR LFD
Sbjct: 10 VVELTRKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFD 69
Query: 63 KTPQRSVFLWNSIIRAYALAHRFND-AKSLFKNLLRTQLKPDNFTYACITRACSENSDLP 121
K P+R+V +N++ AY+ + A SL + LKP++ T+ + + C+ D+
Sbjct: 70 KMPERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTSLVQVCTVLEDVL 129
Query: 122 GLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFA 181
+H I G + + ++++ YS ++ A ++F+ V+ D V N+MI G
Sbjct: 130 MGSLLHSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFECVNGGDAVAWNTMIVGIF 189
Query: 182 HCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWE--PSLLSVGQGIHGFCLKSSFDSY 239
+ L LF ML G P ++T +++ + SVG+ IH + S +
Sbjct: 190 RNDKIEDGLMLFRSMLMSGVDPTQFTYSMVLNACSKLGSYRYSVGKLIHARMIVSDILAD 249
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRK-LN 298
V + L+ MY C M A++VF + +P+LV+W+++I+G S+ G +A+ +R+ L
Sbjct: 250 LPVENALLDMYCSCGDMKEAFYVFGKIHNPNLVSWNSIISGCSENGFGEQAILMYRRLLR 309
Query: 299 MQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLG 358
+ + D ++ + A A+ G ++HG V + G+E SV V + L+ MY K G
Sbjct: 310 ISTPRPDEYTFSAAIPATAEPEKFIHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAE 369
Query: 359 LGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACC 418
+VF ++ER+++ + +I+G G + A + F ++ + D + S++L AC
Sbjct: 370 SAQKVFGVITERDVVLWTEMIVGESRVGNSECAVQLFIEMYREKNRTDGFSLSSVLGACS 429
Query: 419 HGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVS 478
++ G ++F + + G +V + G G E A S I+SL D
Sbjct: 430 DMAMLRQG-QVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAES-IFSLVSNPDLKCW 487
Query: 479 GALLSCCHIYGNSDLAEIVAHQLFEN 504
++L +G + A+ Q+ EN
Sbjct: 488 NSMLGAYSQHGMVEKAQSFFEQILEN 513
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 89/192 (46%)
Query: 23 KELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALA 82
K LH V K R F T L+ +Y N SA+ +F +R V LW +I +
Sbjct: 337 KLLHGQVTKLGYERSVFVGTTLLSMYFKNGEAESAQKVFGVITERDVVLWTEMIVGESRV 396
Query: 83 HRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITS 142
A LF + R + + D F+ + + ACS+ + L + H AI +G S
Sbjct: 397 GNSECAVQLFIEMYREKNRTDGFSLSSVLGACSDMAMLRQGQVFHSLAIKTGFDNVMSVS 456
Query: 143 SALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKT 202
ALV Y K + A +F VS+PDL NSM+ ++ G +K+ F+ +L G T
Sbjct: 457 GALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGAYSQHGMVEKAQSFFEQILENGFT 516
Query: 203 PDEYTLVGLISG 214
PD T + L++
Sbjct: 517 PDAVTYLSLLAA 528
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 59/144 (40%)
Query: 19 LSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRA 78
L + + H+L K + LV +Y N +A +F + WNS++ A
Sbjct: 434 LRQGQVFHSLAIKTGFDNVMSVSGALVDMYGKNGKYETAESIFSLVSNPDLKCWNSMLGA 493
Query: 79 YALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRD 138
Y+ A+S F+ +L PD TY + ACS +F+ G+
Sbjct: 494 YSQHGMVEKAQSFFEQILENGFTPDAVTYLSLLAACSHKGSTQEGKFLWNQMKEQGITAG 553
Query: 139 SITSSALVTAYSKLSLIDEAIKVF 162
S +V+ SK L+ EA+++
Sbjct: 554 FKHYSCMVSLVSKAGLLGEALELI 577
>gi|224099379|ref|XP_002311462.1| predicted protein [Populus trichocarpa]
gi|222851282|gb|EEE88829.1| predicted protein [Populus trichocarpa]
Length = 538
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 155/499 (31%), Positives = 259/499 (51%), Gaps = 11/499 (2%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
+ +A +FD+ P+ + +WN++ R Y+ D LF+ + + P+ FT+ I ++
Sbjct: 1 MENAHKVFDQIPEPNASIWNAMFRGYSQNESHKDVIVLFRQMKGLDVMPNCFTFPVILKS 60
Query: 114 CSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLC 173
C + + L VH I SG + ++ L+ Y+ I A +VF + + +++
Sbjct: 61 CVKINALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAW 120
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLK 233
+MI+G+ C + +LFD L D +ISG E + I L
Sbjct: 121 TAMINGYITCCDLVTARRLFD----LAPERDIVLWNTMISGYIEAKDV-----IRARELF 171
Query: 234 SSFDSYDYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALY 292
+ D +S + +++ YA + + +F + ++ +W+ALI GY++ G + + L
Sbjct: 172 DKMPNKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLS 231
Query: 293 YFRKLNMQGKKA-DPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F+++ + G + + +VL+A A+ + G +H Y HG++ +V V +AL+DMY
Sbjct: 232 AFKRMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMY 291
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+KCG + + VF++M +++I++N++I GL +HG A F + G NPD TF
Sbjct: 292 AKCGVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFI 351
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+LCAC H GLV DG F MT++Y I + EHY +V LLG AG L A FI +P
Sbjct: 352 GILCACTHMGLVEDGFSYFKSMTDDYSIVPRIEHYGCIVDLLGRAGLLAHAVDFIRKMPI 411
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
D + ALL C +Y N +LAE+ +L E +P+ A VMLSN Y + GRW DV +L
Sbjct: 412 EADAVIWAALLGACRVYKNVELAELALEKLIEFEPKNPANYVMLSNIYGDFGRWKDVARL 471
Query: 532 RDDIVDNGLRKEAGVSWVS 550
+ + D G +K G S +
Sbjct: 472 KVAMRDTGFKKLPGCSLIE 490
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 170/404 (42%), Gaps = 46/404 (11%)
Query: 17 QSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
+L +E+H V K+ +PF AT L+ +YA + +A +F + +R+V W ++I
Sbjct: 65 NALKEGEEVHCFVIKSGFRANPFVATTLIDMYASGGAIHAAYRVFGEMIERNVIAWTAMI 124
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKP--DNFTYACITRACSENSDLPGLRFVHGGAIVSG 134
Y A+ LF L P D + + E D+ R +
Sbjct: 125 NGYITCCDLVTARRLF------DLAPERDIVLWNTMISGYIEAKDVIRARELFDKMP--- 175
Query: 135 LGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFD 194
+D ++ + ++ Y+ + ++F+ + + ++ N++I G+ G + + L F
Sbjct: 176 -NKDVMSWNTVLNGYASNGDVMACERLFEEMPERNVFSWNALIGGYTRNGCFSEVLSAFK 234
Query: 195 WMLRLGK-TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARC 253
ML G P++ TLV ++S L +G+ +H + + YV + L+ MYA+C
Sbjct: 235 RMLVDGTVVPNDATLVNVLSACARLGALDLGKWVHVYAESHGYKGNVYVRNALMDMYAKC 294
Query: 254 NCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL 313
+ +A VF S+ + DL++W+ +I G + G AL F + + G+ D + +L
Sbjct: 295 GVVETALDVFKSMDNKDLISWNTIIGGLAVHGHGADALNLFSHMKIAGENPDGITFIGIL 354
Query: 314 AAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNII 373
A H +++ GF ++ D YS I
Sbjct: 355 CACT-----------HMGLVEDGFSY----FKSMTDDYSIV---------------PRIE 384
Query: 374 TYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
Y ++ LG G A +F R + + D ++ALL AC
Sbjct: 385 HYGCIVDLLGRAGLLAHAVDFIRKM---PIEADAVIWAALLGAC 425
>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
Length = 720
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 149/545 (27%), Positives = 280/545 (51%), Gaps = 3/545 (0%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL + + + K +H K L ++ L+ +Y+ + +A+++F ++
Sbjct: 48 VLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKN 107
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLR--TQLKPDNFTYACITRACSENSDLPGLRFV 126
V WN+++ ++ + + + +L +K D T C S LP L+ +
Sbjct: 108 VVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 167
Query: 127 HGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFW 186
H ++ + + ++A V +Y+K + A +VF G+ + N++I G A
Sbjct: 168 HCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDP 227
Query: 187 DKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVL 246
SL M G PD +T+ L+S + L +G+ +HGF +++ + +V +
Sbjct: 228 RLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSV 287
Query: 247 VSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADP 306
+S+Y C + + +F+++ LV+W+ +ITGY Q G +AL FR++ + G +
Sbjct: 288 LSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCG 347
Query: 307 VLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFET 366
+ + V A + ++ G H Y ++H E ++ +L+DMY+K G + +VF
Sbjct: 348 ISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNG 407
Query: 367 MSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDG 426
+ E++ ++N++I+G G+HG +A + F ++ G NPD+ TF +L AC H GL+++G
Sbjct: 408 LKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEG 467
Query: 427 REIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFI-WSLPKPVDPAVSGALLSCC 485
+M +G++ +HY ++ +LG AG L++A + + + D + +LLS C
Sbjct: 468 LRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSC 527
Query: 486 HIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAG 545
I+ N ++ E VA +LFE +P K V+LSN YA G+W+DV K+R + + LRK+AG
Sbjct: 528 RIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAG 587
Query: 546 VSWVS 550
SW+
Sbjct: 588 CSWIE 592
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 173/344 (50%), Gaps = 6/344 (1%)
Query: 67 RSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQ----LKPDNFTYACITRACSENSDLPG 122
R+ WNS+IR ++ ++ L ++ PD T + C+ ++
Sbjct: 1 RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
+ VHG A+ L ++ + ++AL+ YSK I A +F ++ ++V N+M+ GF+
Sbjct: 61 GKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSA 120
Query: 183 CGFWDKSLQLFDWMLRLGK--TPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYD 240
G + + ML G+ DE T++ + + S L + +H + LK F +
Sbjct: 121 EGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNE 180
Query: 241 YVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQ 300
V++ V+ YA+C ++ A VF+ + + +W+ALI G++Q D +L ++ +
Sbjct: 181 LVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKIS 240
Query: 301 GKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLG 360
G D + S+L+A +K ++ G +HG++I++ E + V +++ +Y CG L
Sbjct: 241 GLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTV 300
Query: 361 IQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLN 404
+F+ M +++++++N+VI G +GF +A FR ++ G+
Sbjct: 301 QALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQ 344
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 6/262 (2%)
Query: 174 NSMISGFAHCGFWDKSLQLFDWMLRLGK----TPDEYTLVGLISGLWEPSLLSVGQGIHG 229
NSMI F+ GF ++S L M+ PD TLV ++ + +G+G+HG
Sbjct: 7 NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 66
Query: 230 FCLKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGK 289
+ +K D +++ L+ MY++C C+ +A +F + ++V+W+ ++ G+S +GD
Sbjct: 67 WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHG 126
Query: 290 ALYYFRKLNMQGK--KADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSAL 347
R++ G+ KAD V I + + + + +H Y ++ F + +V++A
Sbjct: 127 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 186
Query: 348 VDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDE 407
V Y+KCG L +VF + + + ++N++I G + + + GL PD
Sbjct: 187 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 246
Query: 408 STFSALLCACCHGGLVNDGREI 429
T +LL AC + G+E+
Sbjct: 247 FTVCSLLSACSKLKSLRLGKEV 268
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 83/166 (50%), Gaps = 6/166 (3%)
Query: 270 DLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKA----DPVLIASVLAAAAKSANVWPG 325
+ V+W+++I +S G ++ ++ + D + +VL A+ + G
Sbjct: 2 NFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG 61
Query: 326 AVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVILGLGLH 385
+HG+ ++ + +++++AL+DMYSKCG + +F+ + +N++++N+++ G
Sbjct: 62 KGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAE 121
Query: 386 GFTYQAFEFFRDIIEKG--LNPDESTFSALLCACCHGGLVNDGREI 429
G T+ F+ R ++ G + DE T + C H + +E+
Sbjct: 122 GDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKEL 167
>gi|225216963|gb|ACN85255.1| EMB2261 putative [Oryza officinalis]
Length = 622
Score = 258 bits (660), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 172/530 (32%), Positives = 267/530 (50%), Gaps = 7/530 (1%)
Query: 25 LHALVAKASLLRDPFYATKLVRLYA-LNNVLPSARILFDKTPQRSVFLWNSIIRAYALAH 83
LHA A+A LL D + A L+ Y L LP A FD P+R V +SI+ A+ A
Sbjct: 56 LHARAARAGLLADRYLANALLAFYVRLPRHLPHALRAFDDLPRRDVVAHSSILAAFLRAG 115
Query: 84 RFNDAKSLFKNLLR---TQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSI 140
A + +++L + P+ + +AC+ D +HG +V G G D +
Sbjct: 116 MPRRALASLRSMLAGADDDVSPNAHALSAAVKACAVLRDRKAGACLHGSVLVRGFGDDDV 175
Query: 141 TSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL- 199
S+LV Y ++ +A KVF+ + PD + S+IS F +++++++ F ML +
Sbjct: 176 VLSSLVDMYGHVAAPGDARKVFEEMRAPDGICYTSLISAFVRNDWFEEAVRWFRSMLMMN 235
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSMYARCNCMNSA 259
G PD T +++ L S G+ H + V S + MYA+C M A
Sbjct: 236 GVRPDGCTFGSMMTALGNLKRGSQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEA 295
Query: 260 YHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLIASVLAAAAKS 319
VF+ + + V+ AL+ GY Q G+Y K + FR+ M + D + +VL A A
Sbjct: 296 RKVFDRMQVRNEVSRCALLGGYCQNGEYEKVIALFRE--MDKEDGDWYSLGTVLRACAGL 353
Query: 320 ANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITYNSVI 379
++V PG IH ++ G V+V SALVD+Y+KCG + VFE + RN IT+N++I
Sbjct: 354 SSVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMI 413
Query: 380 LGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREIFTRMTEEYGI 439
G +G +A F ++ +G PD +F +L AC H G+V GR F M ++YGI
Sbjct: 414 GGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGI 473
Query: 440 QAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPAVSGALLSCCHIYGNSDLAEIVAH 499
EHY MV LL LEEA I P D ++ A+L + N D+AE VA
Sbjct: 474 APGIEHYNCMVDLLSRVELLEEAEDLINKSPFRNDSSLWAAILGASATHSNPDVAERVAK 533
Query: 500 QLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSWV 549
++ E +P+ ++L N Y GRW+D +++R + ++KE G+SW+
Sbjct: 534 KMMELEPQYHLSYILLENVYRTVGRWEDALEIRRLMESRKVKKEPGMSWI 583
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 119/261 (45%), Gaps = 4/261 (1%)
Query: 20 SRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAY 79
S+ ++ HA V L + + + +YA ++ AR +FD+ R+ +++ Y
Sbjct: 258 SQGRQAHAQVVTRGLCGNVIVESSTLDMYAKCGLMVEARKVFDRMQVRNEVSRCALLGGY 317
Query: 80 ALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDS 139
+ +LF+ + + D ++ + RAC+ S + + +H + G RD
Sbjct: 318 CQNGEYEKVIALFREMDKED--GDWYSLGTVLRACAGLSSVKPGKEIHCRFLRMGGWRDV 375
Query: 140 ITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRL 199
+ SALV Y+K +D A VF+ + + + N+MI GFA G ++++ LF+ M+R
Sbjct: 376 VVESALVDLYAKCGAVDYAYSVFEASTVRNTITWNAMIGGFAQNGHGERAINLFNRMVRE 435
Query: 200 GKTPDEYTLVGLISGLWEPSLLSVGQG-IHGFCLKSSFDSYDYVSSVLVSMYARCNCMNS 258
G PD + +G++ ++ G+ + C + +V + +R +
Sbjct: 436 GPRPDYISFIGVLFACSHTGMVEQGRNYFNSMCKDYGIAPGIEHYNCMVDLLSRVELLEE 495
Query: 259 AYHVFN-SLFHPDLVTWSALI 278
A + N S F D W+A++
Sbjct: 496 AEDLINKSPFRNDSSLWAAIL 516
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%)
Query: 9 VLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRS 68
VL S+ KE+H + RD + LV LYA + A +F+ + R+
Sbjct: 346 VLRACAGLSSVKPGKEIHCRFLRMGGWRDVVVESALVDLYAKCGAVDYAYSVFEASTVRN 405
Query: 69 VFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
WN++I +A A +LF ++R +PD ++ + ACS
Sbjct: 406 TITWNAMIGGFAQNGHGERAINLFNRMVREGPRPDYISFIGVLFACS 452
>gi|359483031|ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
[Vitis vinifera]
Length = 788
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 150/499 (30%), Positives = 260/499 (52%), Gaps = 51/499 (10%)
Query: 54 LPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRA 113
+ AR LFD+ P R+V WN++I AY ++A SLF + + ++ ++ +
Sbjct: 249 IAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMP----EKNSISWTTVING 304
Query: 114 CSENSDLPGLRFVHGGAIVSGLG-RDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVL 172
L R +++ + R+ +A+++ Y + +D+A ++F+ +S D+V
Sbjct: 305 YVRMGKLDEAR-----QLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVC 359
Query: 173 CNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCL 232
N+MI+G++ CG D++L LF M++
Sbjct: 360 WNTMIAGYSQCGRMDEALHLFKQMVK---------------------------------- 385
Query: 233 KSSFDSYDYVS-SVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
D VS + +V+ YA+ M++A +F + ++V+W++LI+G +Q G Y AL
Sbjct: 386 ------KDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDAL 439
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
F + +G+K D A L++ A A + G +H V++ G+ + VS+AL+ MY
Sbjct: 440 KSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMY 499
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFS 411
+KCG + +F+ + +++++NS+I L+G +A + F + +G+ PDE TF
Sbjct: 500 AKCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFV 559
Query: 412 ALLCACCHGGLVNDGREIFTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPK 471
+L AC H GL++ G ++F M + Y I+ EHY MV LLG AG LEEA+ + +
Sbjct: 560 GILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMKI 619
Query: 472 PVDPAVSGALLSCCHIYGNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKL 531
+ + GALL C I+GN +LA+ A +L E +P K + V+LSN AE GRWD+V ++
Sbjct: 620 NANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGRWDEVARV 679
Query: 532 RDDIVDNGLRKEAGVSWVS 550
R + + G K+ G SW+
Sbjct: 680 RRLMKEKGAEKQPGWSWIE 698
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 202/474 (42%), Gaps = 60/474 (12%)
Query: 3 FNLHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFD 62
F + + +L KS Q K + K ++ + ++ +A N + AR LFD
Sbjct: 16 FRHNLKITQLGKSGQIDEAIKVFQHMTHKNTVTHN-----SMISAFAKNGRISDARQLFD 70
Query: 63 KTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPG 122
PQR++ WNS+I AY R +A+ LF + L C TR N +L
Sbjct: 71 GMPQRNIVSWNSMIAAYLHNDRVEEARQLFDKMPTRDLYSWTLMITCYTR----NGELAK 126
Query: 123 LRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISGFAH 182
R + + + + +A+V Y+K DEA ++FD + DLV NSM++G+
Sbjct: 127 ARNLFN---LLPYKWNPVCCNAMVAGYAKNRQFDEARRLFDAMPAKDLVSWNSMLTGYTR 183
Query: 183 CGFWDKSLQLFDWMLRLGKTP-----DEYTLVGLISGLWE-------PSLLSVGQGIHGF 230
G LQ F+ M D + VG ++ WE P+ +S + GF
Sbjct: 184 NGEMRLGLQFFEEMAERDVVSWNLMVDGFVEVGDLNSSWEFFEKIPNPNTVSWVTMLCGF 243
Query: 231 C-------LKSSFDSYDYVSSV----LVSMYARCNCMNSAYHVFNSLFHPDLVTWSALIT 279
+ FD + V +++ Y + ++ A +F + + ++W+ +I
Sbjct: 244 ARFGKIAEARRLFDQMPIRNVVAWNAMIAAYVQNCHVDEAISLFMEMPEKNSISWTTVIN 303
Query: 280 GYSQQGDYGKALYYFRKLNMQGKKADPVLIASVL-------------AAAAKSANVWPGA 326
GY + G +A ++ + A +I+ + + + W
Sbjct: 304 GYVRMGKLDEARQLLNQMPYRNVAAQTAMISGYVQNKRMDDARQIFNQISIRDVVCW-NT 362
Query: 327 VIHGY-----------VIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSERNIITY 375
+I GY + + + ++ + +V Y++ G + I++FE M E+NI+++
Sbjct: 363 MIAGYSQCGRMDEALHLFKQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSW 422
Query: 376 NSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
NS+I GL +G A + F + +G PD+STF+ L +C H + G+++
Sbjct: 423 NSLISGLTQNGSYLDALKSFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQL 476
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 135/294 (45%), Gaps = 8/294 (2%)
Query: 31 KASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIRAYALAHRFNDAKS 90
K + +D +V YA + +A +F++ ++++ WNS+I + DA
Sbjct: 381 KQMVKKDIVSWNTMVASYAQVGQMDAAIKIFEEMKEKNIVSWNSLISGLTQNGSYLDALK 440
Query: 91 LFKNLLRTQLKPDNFTYACITRACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYS 150
F + KPD T+AC +C+ + L + +H + SG D S+AL+T Y+
Sbjct: 441 SFMLMGHEGQKPDQSTFACGLSSCAHLAALQVGKQLHQLVMKSGYATDLFVSNALITMYA 500
Query: 151 KLSLIDEAIKVFDGVSDPDLVLCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVG 210
K I A +F + D+V NS+I+ +A G ++L+LF M G PDE T VG
Sbjct: 501 KCGSISSAELLFKDIDHFDVVSWNSLIAAYALNGNGREALKLFHKMEVEGVAPDEVTFVG 560
Query: 211 LISGLWEPSLLSVGQGIHGF-CLKSSFDSYDYVS--SVLVSMYARCNCMNSAYHVFNSL- 266
++S L + QG+ F C+ +++ + +V + R + A+ + +
Sbjct: 561 ILSACSHVGL--IDQGLKLFKCMVQAYNIEPLAEHYACMVDLLGRAGRLEEAFQLVRGMK 618
Query: 267 FHPDLVTWSALITGYSQQGDYGKALYYFRKL--NMQGKKADPVLIASVLAAAAK 318
+ + W AL+ G+ A + KL K ++ VL++++ A A +
Sbjct: 619 INANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPHKTSNYVLLSNMQAEAGR 672
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%)
Query: 18 SLSRTKELHALVAKASLLRDPFYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSIIR 77
+L K+LH LV K+ D F + L+ +YA + SA +LF V WNS+I
Sbjct: 469 ALQVGKQLHQLVMKSGYATDLFVSNALITMYAKCGSISSAELLFKDIDHFDVVSWNSLIA 528
Query: 78 AYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACS 115
AYAL +A LF + + PD T+ I ACS
Sbjct: 529 AYALNGNGREALKLFHKMEVEGVAPDEVTFVGILSACS 566
>gi|356495279|ref|XP_003516506.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19220,
mitochondrial-like [Glycine max]
Length = 944
Score = 258 bits (659), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 169/541 (31%), Positives = 279/541 (51%), Gaps = 20/541 (3%)
Query: 19 LSRT-KELHALVAKASLLRDP-FYATKLVRLYALNNVLPSARILFDKTPQRSVFLWNSII 76
LSR + +H + ++ D L+ +Y+ N++ A +LF+ T ++ WN++I
Sbjct: 410 LSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELLFNSTAEKDTVSWNAMI 469
Query: 77 RAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSDLPGLRF---VHGGAIVS 133
Y+ +A++LF +LR + T I +C+ + ++ + F VH + S
Sbjct: 470 SGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSCN-SLNINSIHFGKSVHCWQLKS 528
Query: 134 GLGRDSITSSALVTAYSKLSLIDEAIKVF-DGVSDPDLVLCNSMISGFAHCGFWDKSLQL 192
G + + L+ Y + + + + + D+ N++I G C + ++L+
Sbjct: 529 GFLNHILLINILMHMYINCGDLTASFSILHENSALADIASWNTLIVGCVRCDHFREALET 588
Query: 193 FDWMLRLGKTP---DEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSYDYVSSVLVSM 249
F+ M + + P D TLV +S L ++G+ +HG +KS S V + L++M
Sbjct: 589 FNLMRQ--EPPLNYDSITLVSALSACANLELFNLGKSLHGLTVKSPLGSDTRVQNSLITM 646
Query: 250 YARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNMQGKKADPVLI 309
Y RC +NSA VF P+L +W+ +I+ S + +AL F LN+Q + + + I
Sbjct: 647 YDRCRDINSAKVVFKFFSTPNLCSWNCMISALSHNRESREALELF--LNLQFE-PNEITI 703
Query: 310 ASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMYSKCGYLGLGIQVFETMSE 369
VL+A + + G +H +V + + + +S+AL+D+YS CG L +QVF E
Sbjct: 704 IGVLSACTQIGVLRHGKQVHAHVFRTCIQDNSFISAALIDLYSNCGRLDTALQVFRHAKE 763
Query: 370 RNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCACCHGGLVNDGREI 429
++ +NS+I G HG +A + F ++ E G +STF +LL AC H GLVN G
Sbjct: 764 KSESAWNSMISAYGYHGKGEKAIKLFHEMCESGARVSKSTFVSLLSACSHSGLVNQGLWF 823
Query: 430 FTRMTEEYGIQAKTEHYIYMVKLLGLAGNLEEAYSFIWSLPKPVDPA-VSGALLSCCHIY 488
+ M E YG+Q +TEH +Y+V +LG +G L+EAY F K D + V GALLS C+ +
Sbjct: 824 YECMLERYGVQPETEHQVYVVDMLGRSGRLDEAYEF----AKGCDSSGVWGALLSACNYH 879
Query: 489 GNSDLAEIVAHQLFENDPRKGAYKVMLSNTYAEDGRWDDVMKLRDDIVDNGLRKEAGVSW 548
G L + +A LF+ +P+ + + LSN Y G W D +LR I D GLRK AG S
Sbjct: 880 GELKLGKKIAQYLFQLEPQNVGHYISLSNMYVAAGSWKDATELRQSIQDLGLRKTAGYSL 939
Query: 549 V 549
V
Sbjct: 940 V 940
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 202/420 (48%), Gaps = 9/420 (2%)
Query: 5 LHFLVLELSKSHQSLSRTKELHALVAKASLLRDPFYA-----TKLVRLYALNNVLPSARI 59
+HF +++ K L + K + A VA + L+ A T L+ +Y+ S++
Sbjct: 90 IHFELVDYIK--LCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKG 147
Query: 60 LFDKTPQRSVFLWNSIIRAYALAHRFNDAKSLFKNLLRTQLKPDNFTYACITRACSENSD 119
LFD+ R WN+I+ A + A F +++ Q D+ T I A +
Sbjct: 148 LFDEIQNRDAIAWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKN 207
Query: 120 LPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLVLCNSMISG 179
R +H +I SG+ D +ALV Y+K + + +++ + D V NS++ G
Sbjct: 208 FDQGRAIHCVSIKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRG 267
Query: 180 FAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFCLKSSFDSY 239
+ +K+L F M +T D +L IS LS GQ +HG +K + S+
Sbjct: 268 SLYNRHPEKALCYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSH 327
Query: 240 DYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKALYYFRKLNM 299
V++ L+S+Y++C + +A +F + D+V+W+A++ G++ G + ++
Sbjct: 328 VSVANSLISLYSQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQK 387
Query: 300 QG-KKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGF-ELSVMVSSALVDMYSKCGYL 357
G + D V + ++L A+ G IHGY I+ VM+ ++L+ MYSKC +
Sbjct: 388 VGFFQPDIVTLITLLPLCAELMLSREGRTIHGYAIRRQMISDHVMLLNSLIGMYSKCNLV 447
Query: 358 GLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKGLNPDESTFSALLCAC 417
+F + +E++ +++N++I G + ++ +A F +++ G N ST A+L +C
Sbjct: 448 EKAELLFNSTAEKDTVSWNAMISGYSHNRYSEEAQNLFTEMLRWGPNCSSSTVFAILSSC 507
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 177/377 (46%), Gaps = 10/377 (2%)
Query: 112 RACSENSDLPGLRFVHGGAIVSGLGRDSITSSALVTAYSKLSLIDEAIKVFDGVSDPDLV 171
+ C + + H A+ G TS++L+T YSK + +FD + + D +
Sbjct: 99 KLCLKKPKIVTATVAHCAALKIGALAHLPTSTSLLTIYSKAGDFTSSKGLFDEIQNRDAI 158
Query: 172 LCNSMISGFAHCGFWDKSLQLFDWMLRLGKTPDEYTLVGLISGLWEPSLLSVGQGIHGFC 231
N++++ + ++ FD M++ D TL+ ++S G+ IH
Sbjct: 159 AWNAIVAASLENKCYRIAMDFFDKMIKAQTGFDSTTLLLIVSASLHMKNFDQGRAIHCVS 218
Query: 232 LKSSFDSYDYVSSVLVSMYARCNCMNSAYHVFNSLFHPDLVTWSALITGYSQQGDYGKAL 291
+KS + + LV MYA+C ++S+ ++ + D V+W++++ G KAL
Sbjct: 219 IKSGMLVDISLGNALVDMYAKCGDLSSSECLYEEIECKDAVSWNSIMRGSLYNRHPEKAL 278
Query: 292 YYFRKLNMQGKKADPVLIASVLAAAAKSANVWPGAVIHGYVIQHGFELSVMVSSALVDMY 351
YF++++ + AD V + ++A++ + G +HG I+ G++ V V+++L+ +Y
Sbjct: 279 CYFKRMSFSEETADNVSLCCAISASSSLGELSFGQSVHGLGIKLGYKSHVSVANSLISLY 338
Query: 352 SKCGYLGLGIQVFETMSERNIITYNSVILGLGLHGFTYQAFEFFRDIIEKG-LNPDESTF 410
S+C + +F ++ ++I+++N+++ G +G + F+ + + G PD T
Sbjct: 339 SQCEDIKAAETLFREIALKDIVSWNAMMEGFASNGKIKEVFDLLVQMQKVGFFQPDIVTL 398
Query: 411 SALLCACCHGGLVNDGREIFTRMTEEYGI--QAKTEHYIYMVKLLGL--AGNLEEAYSFI 466
LL C L +GR I Y I Q ++H + + L+G+ NL E +
Sbjct: 399 ITLLPLCAELMLSREGRTI-----HGYAIRRQMISDHVMLLNSLIGMYSKCNLVEKAELL 453
Query: 467 WSLPKPVDPAVSGALLS 483
++ D A++S
Sbjct: 454 FNSTAEKDTVSWNAMIS 470
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.137 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,822,662,791
Number of Sequences: 23463169
Number of extensions: 371120351
Number of successful extensions: 981671
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8496
Number of HSP's successfully gapped in prelim test: 2390
Number of HSP's that attempted gapping in prelim test: 806841
Number of HSP's gapped (non-prelim): 59845
length of query: 554
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 406
effective length of database: 8,886,646,355
effective search space: 3607978420130
effective search space used: 3607978420130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)