Your job contains 1 sequence.
>045071
MEAFNTLSMASPFSYTFTSSSSSCGSGSGSGTATSNNPMFTACPWMDSRIWSKLPQRLLD
RVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHVSPRHHWFLFFNQKTPLIKTTSYI
YTTNNNSIRSAAAATCCEGYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDHAGA
KTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESF
HIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANAWFNIQA
PMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQ
FAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQWIPRCPYVQANNCGGNYGDG
EGELHGFAYEPRLATPVTALLDQLTLPFQSFSG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045071
(453 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015766 - symbol:UFO "AT1G30950" species:3702 ... 1431 1.7e-146 1
TAIR|locus:2143256 - symbol:AT5G15710 "AT5G15710" species... 223 2.4e-26 2
TAIR|locus:2015974 - symbol:LCR "AT1G27340" species:3702 ... 191 7.6e-21 2
TAIR|locus:2082797 - symbol:HWS "HAWAIIAN SKIRT" species:... 181 6.8e-19 2
TAIR|locus:2169253 - symbol:AT5G43190 "AT5G43190" species... 177 1.9e-15 2
TAIR|locus:2025247 - symbol:AT1G76920 "AT1G76920" species... 106 2.7e-09 2
TAIR|locus:2125889 - symbol:AT4G33160 "AT4G33160" species... 98 2.7e-06 2
TAIR|locus:2152064 - symbol:AT5G65850 "AT5G65850" species... 100 0.00047 2
>TAIR|locus:2015766 [details] [associations]
symbol:UFO "AT1G30950" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IMP] [GO:0005634 "nucleus" evidence=ISM] [GO:0000151
"ubiquitin ligase complex" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA;TAS] [GO:0031146 "SCF-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IGI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0042752 "regulation of circadian rhythm"
evidence=RCA] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
GO:GO:0006351 SUPFAM:SSF81383 GO:GO:0009908 GO:GO:0004842
GO:GO:0031146 EMBL:AC000107 EMBL:X89224 EMBL:DQ056469
IPI:IPI00521563 PIR:S57710 RefSeq:NP_564368.1 UniGene:At.51845
ProteinModelPortal:Q39090 SMR:Q39090 IntAct:Q39090 STRING:Q39090
EnsemblPlants:AT1G30950.1 GeneID:839982 KEGG:ath:AT1G30950
TAIR:At1g30950 eggNOG:NOG303383 HOGENOM:HOG000084155
InParanoid:Q39090 OMA:VEIERMP PhylomeDB:Q39090
ProtClustDB:CLSN2688127 ArrayExpress:Q39090 Genevestigator:Q39090
GermOnline:AT1G30950 Uniprot:Q39090
Length = 442
Score = 1431 (508.8 bits), Expect = 1.7e-146, P = 1.7e-146
Identities = 274/407 (67%), Positives = 318/407 (78%)
Query: 45 WMDSRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHVSP-RHHW 103
WMD RIWSKLP LLDRV+AFLPPPAFFR R VCKR+Y LLFSN+FLE Y+ + P RH+
Sbjct: 41 WMDGRIWSKLPPPLLDRVIAFLPPPAFFRTRCVCKRFYSLLFSNTFLETYLQLLPLRHNC 100
Query: 104 FLFFNQKTPLIKXXXXXXXXXXXXXRSAAAATCCEGYLFDPHELSWYRISFALVPSEFSP 163
FLFF KT +K + A EG+LFDP+E+ WYR+SFA +PS F P
Sbjct: 101 FLFFKHKT--LKSYIYKRGGTNDDDSNKA-----EGFLFDPNEIRWYRLSFAYIPSGFYP 153
Query: 164 ASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAG 223
+ SSGGLV WVS+ AG KT++LCNP+ GS+SQLPP RPRLFPSIGL VTPT++DVTVAG
Sbjct: 154 SGSSGGLVSWVSEEAGLKTILLCNPLVGSVSQLPPISRPRLFPSIGLSVTPTSIDVTVAG 213
Query: 224 DDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPF 283
DDLISPYAVKNLSSESFH+DAGGFFSLW TSSLPRLCSLESG+MV V GKFYCMNYSPF
Sbjct: 214 DDLISPYAVKNLSSESFHVDAGGFFSLWAMTSSLPRLCSLESGKMVYVQGKFYCMNYSPF 273
Query: 284 SVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQAC 343
SVL+Y+++ N W IQAPMRRFLRSPSLL+S G+LILVAAVEKSKLNVPKSLRLWSLQ
Sbjct: 274 SVLSYEVTGNRWIKIQAPMRRFLRSPSLLESKGRLILVAAVEKSKLNVPKSLRLWSLQQD 333
Query: 344 GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQWIP 403
W EIERMPQ LY QFA E G GF+ +G+ EF++IV+RG+ LLFD+ KSW W+P
Sbjct: 334 NATWVEIERMPQPLYTQFAAEEGGKGFECVGNQEFVMIVLRGTSLQLLFDIVRKSWLWVP 393
Query: 404 RCPYVQANNCGGNYGDG-EGE-LHGFAYEPRLATPVTALLDQLTLPF 448
CPY + + GG+ G G +GE L GFAY+P L TPV +LLDQLTLPF
Sbjct: 394 PCPY--SGSGGGSSGGGSDGEVLQGFAYDPVLTTPVVSLLDQLTLPF 438
>TAIR|locus:2143256 [details] [associations]
symbol:AT5G15710 "AT5G15710" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.130.10.80 InterPro:IPR015916 EMBL:AL391144
EMBL:AK229249 EMBL:BT011243 EMBL:BT012539 IPI:IPI00543903
PIR:T51400 RefSeq:NP_197075.1 UniGene:At.31763
ProteinModelPortal:Q9LFV5 SMR:Q9LFV5 STRING:Q9LFV5
EnsemblPlants:AT5G15710.1 GeneID:831425 KEGG:ath:AT5G15710
TAIR:At5g15710 eggNOG:NOG262508 HOGENOM:HOG000005882
InParanoid:Q9LFV5 OMA:SKMAFCD PhylomeDB:Q9LFV5
ProtClustDB:CLSN2687485 Genevestigator:Q9LFV5 Uniprot:Q9LFV5
Length = 448
Score = 223 (83.6 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 71/268 (26%), Positives = 110/268 (41%)
Query: 148 SWYRISFALVPS-EFSPASSSGGLVCWVS-DHAGAKTLILCNPVTGSLSQLPPTLRPRLF 205
+WY+I F +P F SSGGLVC+ D +TL+ CNP+ S LP +
Sbjct: 179 TWYKIPFTFLPPWAFWLVGSSGGLVCFSGLDGLTFRTLV-CNPLMQSWRTLPSMHYNQQR 237
Query: 206 PSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLES 265
I + +A D+ Y K+L +E + W +P + +L S
Sbjct: 238 QLIMVVDRSDKSFKVIATSDI---YGDKSLPTEVYDSKT----DKWSLHQIMPAV-NLCS 289
Query: 266 GRMVQVNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGK-LILVAAV 324
+M + + Y SP ++ Y + + W +I A R L L+ K L LV +
Sbjct: 290 SKMAYCDSRLYLETLSPLGLMMYRLDSGQWEHIPAKFPRSLLDGYLVAGTQKRLFLVGRI 349
Query: 325 EKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIR 384
+ +S+R+W L W EI RMP + + + A F+ G I
Sbjct: 350 --GLYSTLQSMRIWELDHTKVSWVEISRMPPKYFRALLRLSAER-FECFGQDNLICFTSW 406
Query: 385 GSDKALLFDLCMKSWQWIPRCPYVQANN 412
K LL+++ K W WI C N+
Sbjct: 407 NQGKGLLYNVDKKIWSWISGCALQSCNS 434
Score = 140 (54.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 46 MDSRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHVSPRHHWFL 105
M+ IW+ LP+ LL+ +LA +PP FR R+VCK+W +L NSFL+ + +VS L
Sbjct: 99 MEDGIWAMLPEDLLNEILARVPPFMIFRIRSVCKKWNLILQDNSFLKFHSNVSSHGPCLL 158
Query: 106 FFNQKTPLI 114
F + +P I
Sbjct: 159 TFWKNSPQI 167
>TAIR|locus:2015974 [details] [associations]
symbol:LCR "AT1G27340" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0010305 "leaf vascular tissue pattern
formation" evidence=IMP] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IMP] [GO:0060776 "simple leaf
morphogenesis" evidence=IMP] InterPro:IPR001810 InterPro:IPR015915
Pfam:PF00646 PROSITE:PS50181 SMART:SM00256 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF81383 Gene3D:2.120.10.80
EMBL:AC004557 GO:GO:0010305 GO:GO:0010928 InterPro:IPR011043
SUPFAM:SSF50965 EMBL:AY085471 EMBL:BT025325 IPI:IPI00546257
RefSeq:NP_564278.1 UniGene:At.20471 UniGene:At.22230
ProteinModelPortal:Q9FZK1 SMR:Q9FZK1 IntAct:Q9FZK1 STRING:Q9FZK1
PRIDE:Q9FZK1 EnsemblPlants:AT1G27340.1 GeneID:839623
KEGG:ath:AT1G27340 TAIR:At1g27340 eggNOG:NOG325143
HOGENOM:HOG000238626 InParanoid:Q9FZK1 OMA:ATFFRFR PhylomeDB:Q9FZK1
ProtClustDB:CLSN2688013 Genevestigator:Q9FZK1 GO:GO:0060776
Uniprot:Q9FZK1
Length = 467
Score = 191 (72.3 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 70/278 (25%), Positives = 123/278 (44%)
Query: 139 GYLFDPHELSWYRISFALVPSE--FSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQL 196
G ++DP W+ +P + P +S+GGLVC++ G + + NP+T S +L
Sbjct: 181 GQVYDPSLKKWHHPIIPALPKKSIVLPMASAGGLVCFLD--IGHRNFYVSNPLTKSFREL 238
Query: 197 PPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLW---GT 253
P R F + +V AV +T+ G+ Y V + E + ++W GT
Sbjct: 239 PA----RSF-KVWSRV---AVGMTLNGNSTSHGYKVLWVGCEGEYEVYDSLSNVWTKRGT 290
Query: 254 TSS---LPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPS 310
S LP L + +S + V ++ Y M P +L+YD+ + W P L +
Sbjct: 291 IPSNIKLPVLLNFKS-QPVAIHSTLYFMLTDPEGILSYDMVSGKWKQFIIPGPPDLSDHT 349
Query: 311 LLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGF 370
L +L+LV + K N + +W LQ LW E++RMP +F
Sbjct: 350 LAACGERLMLVGLLTK---NAATCVCIWELQKMTLLWKEVDRMPNIWCLEFYGKHIR--M 404
Query: 371 DTIGH-GEFIVIVIRGS--DKALLFDLCMKSWQWIPRC 405
+ +G+ G I++ +R ++ + ++ + W +P C
Sbjct: 405 NCLGNKGCLILLSLRSRQMNRLITYNAVTREWTKVPGC 442
Score = 125 (49.1 bits), Expect = 7.6e-21, Sum P(2) = 7.6e-21
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 46 MDSRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHVSPRHHWF 104
MD IW + PQ L + V++ LP FF+ RAVC++W L+ S+SF + + WF
Sbjct: 112 MDQEIWQEFPQDLFEDVVSRLPMATFFQFRAVCRKWNALIDSDSFSRCFTELPQTIPWF 170
>TAIR|locus:2082797 [details] [associations]
symbol:HWS "HAWAIIAN SKIRT" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0048513
"organ development" evidence=IMP] [GO:0006869 "lipid transport"
evidence=RCA] InterPro:IPR001810 InterPro:IPR015915 Pfam:PF00646
PROSITE:PS50181 SMART:SM00256 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132962 SUPFAM:SSF81383
Gene3D:2.120.10.80 GO:GO:0004842 GO:GO:0048513 EMBL:AF386994
EMBL:BT000054 IPI:IPI00532966 PIR:T47951 RefSeq:NP_001190155.1
RefSeq:NP_191718.1 UniGene:At.951 ProteinModelPortal:Q9M310
SMR:Q9M310 IntAct:Q9M310 STRING:Q9M310 PRIDE:Q9M310
EnsemblPlants:AT3G61590.1 EnsemblPlants:AT3G61590.2 GeneID:825332
KEGG:ath:AT3G61590 TAIR:At3g61590 eggNOG:NOG301211
HOGENOM:HOG000238968 InParanoid:Q9M310 OMA:DDLIYIQ PhylomeDB:Q9M310
ProtClustDB:CLSN2685255 Genevestigator:Q9M310 Uniprot:Q9M310
Length = 411
Score = 181 (68.8 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 82/318 (25%), Positives = 130/318 (40%)
Query: 139 GYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQL-- 196
GY +DP WY + + +SS GLVC++ + K + + NP+T L
Sbjct: 105 GYAYDPIIRKWYSFDLPCIETSNWFVASSCGLVCFMDNDCRNK-IYVSNPITKQWRTLIE 163
Query: 197 PPTLRPRLFPSIGLKVTPTAVDVTVAGDDL-ISPYAVKNLSSESFHIDAG-GFFS----L 250
PP + + ++ V V A +S K + F D +S
Sbjct: 164 PPGHKSTDYTAMSTSVNRANQAVNRANRSYSVSIVKSKQVPGNFFQWDLSIHLYSSETMT 223
Query: 251 WGTTSSLPRLCSLESGR-MVQVNGKFYCMNYSPF-SVLAYDISANAWFNIQAP-----MR 303
W TT L G V N Y M YS S + + A+ +I +P MR
Sbjct: 224 W-TTLVNDVLSGWRGGNESVICNNVLYFMIYSTGGSDHRHGLIASNLSSIGSPSSGILMR 282
Query: 304 RFLRSPS------LLDSNGKLILVAAVEK-SKLNVPKSLRLWSLQACGTLWAEIERMPQQ 356
F+ P L++ +L++V + K + V K + +W L+ G W E+ +MPQ+
Sbjct: 283 SFIPMPCSLTCGRLMNLRERLVIVGGIGKHDRPEVIKGIGIWVLK--GKEWVEMAKMPQR 340
Query: 357 LYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQWIPRCPYVQANNCGGN 416
+ F E + F + G + + I GS L FD+ +K W+W +CP +
Sbjct: 341 FFQGFGEFD--EVFASSGTDDLVYIQSYGSPALLTFDMNLKYWRWSQKCPVTKKFPL--- 395
Query: 417 YGDGEGELH-GFAYEPRL 433
+L GF +EPRL
Sbjct: 396 ------QLFTGFCFEPRL 407
Score = 115 (45.5 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 27/63 (42%), Positives = 37/63 (58%)
Query: 52 SKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIH--VSPRHHWFLFFNQ 109
S LP LL+R+L+FLP + FRA VCKRW ++ S FL + + VS R +F+F
Sbjct: 41 SLLPDDLLERILSFLPIASIFRAGTVCKRWNEIVSSRRFLCNFSNNSVSQRPWYFMFTTT 100
Query: 110 KTP 112
P
Sbjct: 101 DDP 103
>TAIR|locus:2169253 [details] [associations]
symbol:AT5G43190 "AT5G43190" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0006865 "amino acid transport" evidence=RCA] [GO:0006869 "lipid
transport" evidence=RCA] [GO:0015824 "proline transport"
evidence=RCA] InterPro:IPR001810 InterPro:IPR011498
InterPro:IPR015915 Pfam:PF00646 Pfam:PF07646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF81383 Gene3D:2.120.10.80 InterPro:IPR017451
TIGRFAMs:TIGR01640 EMBL:AB017070 InterPro:IPR011043 SUPFAM:SSF50965
EMBL:BT003084 EMBL:AK227592 IPI:IPI00525493 RefSeq:NP_568622.1
UniGene:At.27993 ProteinModelPortal:Q9FHS6 SMR:Q9FHS6 IntAct:Q9FHS6
PRIDE:Q9FHS6 EnsemblPlants:AT5G43190.1 GeneID:834337
KEGG:ath:AT5G43190 TAIR:At5g43190 eggNOG:NOG250994
HOGENOM:HOG000112600 InParanoid:Q9FHS6 OMA:SCGFRWF PhylomeDB:Q9FHS6
ProtClustDB:CLSN2689919 Genevestigator:Q9FHS6 Uniprot:Q9FHS6
Length = 403
Score = 177 (67.4 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 66/287 (22%), Positives = 117/287 (40%)
Query: 141 LFDPHELSWYRI----SFALVPSEFSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQL 196
LF+P+ +SW + S +L + S SSS GL+C+ + +L + NP+T S +
Sbjct: 112 LFNPNLISWCTLPLPRSLSLTCAS-SLLSSSNGLLCFSLSPSSVSSLSIFNPLTRSSRSI 170
Query: 197 PPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG--GFFSLWGTT 254
P F + L +P + L S + + S + D+G + G
Sbjct: 171 KLPCYPFPFELLSLVTSPKGYKIFT----LCSSSSAASSRSVCLY-DSGDRSWRKFGGVD 225
Query: 255 SSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANAWFNIQA----PMRRFLRSPS 310
LPR + + G V NG Y PF +++ D++ W P +
Sbjct: 226 QVLPRGFN-QDG--VFYNGSLYFARSEPFLIVSVDLNDGKWTTATGDGVFPADDEITFAR 282
Query: 311 LLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGF 370
L+ K IL + +S+++W + W E+E +P + +F + N
Sbjct: 283 LVSDPEKKILYMVGGIGSNGICRSIKIWEFKEETESWIEVETLPDIVCRKFTSVCYHNYE 342
Query: 371 DT--IGHGEFIVIVIRGSDKALLFDLCMKSWQWIPRCPYVQAN-NCG 414
+ H E I + + L F + ++W W+P+CP + +CG
Sbjct: 343 HVYCLWHKEMICVCCYNWPEILFFHVGRRTWHWVPKCPSLPEKWSCG 389
Score = 86 (35.3 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 36 NNPMFTACPW-MDSRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFL 91
++P + P +D IWS LP LL+ +L+ LP R++ + L+ S SF+
Sbjct: 32 SSPTALSSPTNLDPNIWSNLPNHLLEHILSLLPFKTLLTLRSISRHLRSLILSPSFI 88
>TAIR|locus:2025247 [details] [associations]
symbol:AT1G76920 "AT1G76920" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006869 "lipid
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] InterPro:IPR001810 InterPro:IPR011498
InterPro:IPR015915 Pfam:PF00646 Pfam:PF07646 PROSITE:PS50181
SMART:SM00256 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 SUPFAM:SSF81383
GO:GO:0016567 Gene3D:2.120.10.80 EMBL:AC002291 EMBL:AY065102
EMBL:BT008455 EMBL:AY085473 IPI:IPI00535488 PIR:A96798
RefSeq:NP_565142.1 UniGene:At.21630 UniGene:At.67164
ProteinModelPortal:O49279 SMR:O49279 IntAct:O49279 STRING:O49279
ProMEX:O49279 EnsemblPlants:AT1G76920.1 GeneID:844027
KEGG:ath:AT1G76920 TAIR:At1g76920 eggNOG:NOG324999
HOGENOM:HOG000241138 InParanoid:O49279 OMA:VGSPWRS PhylomeDB:O49279
ProtClustDB:CLSN2689248 Genevestigator:O49279 Uniprot:O49279
Length = 374
Score = 106 (42.4 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 31/114 (27%), Positives = 51/114 (44%)
Query: 306 LRSPSLLDSNG--KLILVAAVEKS-KLNVPKS-LRLWSLQACGTLWAEIERMPQQLYAQF 361
++ P LL NG KL+++ ++ + LN S + + L W E RMP ++Y F
Sbjct: 254 IKRPRLLRGNGDSKLLMIGGLKSTFSLNPACSTILILRLDLESLEWEEAGRMPLEMYRGF 313
Query: 362 AEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQWIPRCPYVQANNCGG 415
E + F G G+ + + K ++D C + W+WI P C G
Sbjct: 314 QE---SSKFKVFGGGDRVYFSAKRMGKLAMWD-CWQGWRWIEGVPGYADGLCRG 363
Score = 104 (41.7 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 45/160 (28%), Positives = 67/160 (41%)
Query: 46 MDSRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHVSPRHHWFL 105
M+S + LP L ++ + LP R+VCK + LL S F+E+ +S R
Sbjct: 1 MESSPVNCLPPDSLHQIFSSLPIRDIMICRSVCKFFNQLLTSQCFIEI---ISTR----- 52
Query: 106 FFNQKTPLIKXXXXXXXXXXXXXRSAAA-ATCCEGYL--FDPHELSWYRISFALVPSEF- 161
PL S AT Y+ +DP + W+R + +P
Sbjct: 53 -----PPLNLLALRPPHHHHSHRHSGNGHATNIRPYIHVYDPEQNQWFRFNLDFLPFRSP 107
Query: 162 SPASSSGGLV-CWVS--DHA-GAKTLILCNPVTGSLSQLP 197
P +SS GL+ W D A +K+L+ CNP+T LP
Sbjct: 108 QPVASSSGLIYLWGDSIDLAESSKSLVACNPLTRQFKVLP 147
>TAIR|locus:2125889 [details] [associations]
symbol:AT4G33160 "AT4G33160" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181 SMART:SM00256
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF81383
EMBL:AL161583 Gene3D:2.130.10.80 InterPro:IPR015916
InterPro:IPR011043 SUPFAM:SSF50965 EMBL:AL035525 EMBL:BX828112
EMBL:BT029208 IPI:IPI00536897 PIR:T05196 RefSeq:NP_567915.3
UniGene:At.43589 ProteinModelPortal:Q9SMZ3 SMR:Q9SMZ3
EnsemblPlants:AT4G33160.1 GeneID:829453 KEGG:ath:AT4G33160
TAIR:At4g33160 eggNOG:NOG244008 HOGENOM:HOG000240122
InParanoid:Q9SMZ3 OMA:RSPSKQY Genevestigator:Q9SMZ3 Uniprot:Q9SMZ3
Length = 457
Score = 98 (39.6 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 58 LLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHVSPRHHWFLFFN 108
+L+RVL++LP FFR +VCKRW S SF + R WF +
Sbjct: 74 VLERVLSWLPTSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMID 124
Score = 86 (35.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 32/110 (29%), Positives = 53/110 (48%)
Query: 140 YLFDPHELSWYRIS---FALVP-SEFSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQ 195
++FD E SW ++ F +F P +SSGGL+C+ +G +L NP+TGS
Sbjct: 132 FVFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISG--DFLLRNPLTGSSRD 189
Query: 196 LPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYA-VKNLSSESFHIDA 244
+P P + +T T V T + L++ + NLS + + +A
Sbjct: 190 IPSQDNNNNKPLQAVAMTTTTV--TPSSYTLVTISGEIPNLSFKIYESNA 237
Score = 78 (32.5 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 46/223 (20%), Positives = 93/223 (41%)
Query: 206 PSIGLKVTPTAVDVTVAGDDLISPYAVKNLSS---ESFHIDAGG--FFSLWGT----TSS 256
P++ K+ + D +L S VKN S + + D+G F S G +++
Sbjct: 226 PNLSFKIYESNADSWSKDQELES---VKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNN 282
Query: 257 LPRLCSLESGRMVQVNGK----FYCMNYSPFSVLAYDISANAWFNIQAPMRRFLR-SPSL 311
L R S + ++ V + ++ +Y +++A D++ + + + FL S L
Sbjct: 283 LQRSPSKQYSSVITVTDEAEIVYFLSSYG--TIVACDLTKRCFTELPKLLPPFLEYSIDL 340
Query: 312 LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMP----QQLYAQFAEIEAG 367
++ G + ++ S+ SLR+W L W ++ +P +LY + +I
Sbjct: 341 VECEGTMYVILL---SEFFESASLRIWRLDN-NREWVQVGMLPPALSHELYGKKGDINCV 396
Query: 368 NGFDTIGHGEFIVIVIRGSD-----KALLFDLCMKSWQWIPRC 405
G G I++ S + ++DL + W +P+C
Sbjct: 397 GGA-----GNKILVCFNASPPEVYCRYFVYDLVAEEWNELPKC 434
>TAIR|locus:2152064 [details] [associations]
symbol:AT5G65850 "AT5G65850" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001810 Pfam:PF00646 PROSITE:PS50181
SMART:SM00256 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AL021684
SUPFAM:SSF81383 InterPro:IPR017451 TIGRFAMs:TIGR01640
HOGENOM:HOG000064703 InterPro:IPR013187 Pfam:PF08268 EMBL:AB018108
EMBL:BT015075 EMBL:BT015673 IPI:IPI00540060 PIR:T05886
RefSeq:NP_201386.1 UniGene:At.66727 ProteinModelPortal:Q9FHP3
SMR:Q9FHP3 EnsemblPlants:AT5G65850.1 GeneID:836714
KEGG:ath:AT5G65850 TAIR:At5g65850 eggNOG:NOG323523
InParanoid:Q9FHP3 OMA:TRTNEIM PhylomeDB:Q9FHP3
ProtClustDB:CLSN2683259 Genevestigator:Q9FHP3 Uniprot:Q9FHP3
Length = 392
Score = 100 (40.3 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 56/225 (24%), Positives = 92/225 (40%)
Query: 136 CC--EGYLF---DPHELSWYRISFALVPSEFSP----ASSSGGLVCWVSDHAGAKTLILC 186
CC +G LF P + Y S A+ FS + GL+C+ ++C
Sbjct: 88 CCKKDGNLFFFSSPQLQNPYENSSAISLKNFSLCYKISRPVNGLICFKRKEMNETVTVIC 147
Query: 187 NPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG- 245
NP TG LP ++ + PS P V L+S Y S E + G
Sbjct: 148 NPSTGHTLSLPKPMKTSIGPSRFFVYEPIQKQFKV----LLS-YK----SDEHQVLTLGT 198
Query: 246 GFFSLWGTTS-SLPRLCSLESGRMVQVNGKFY--CMNYSP--FSVLAYDISANAWFNIQA 300
G S W S+P + + + +NG Y +N S + ++ +D+ + F
Sbjct: 199 GELS-WRIIECSMPHILGMSE---ICINGVLYYPAINLSSGDYIIVCFDVRSEK-FRFIT 253
Query: 301 PMRRFLRSP---SLLDSNGKLILVAAVEKSKLNV-PKSLRLWSLQ 341
M F+++ +L++ NGKL + + ++ KS+ LW LQ
Sbjct: 254 VMEEFIKAAHDGTLINYNGKLASLVSERYCFVDGRSKSIELWVLQ 298
Score = 60 (26.2 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 53 KLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHVSPRHHWFLFFNQK 110
++P ++ +L LP + R V K W ++ F EL++ S LF +K
Sbjct: 34 QIPVDIIIEILLRLPAKSIATCRCVSKLWISVICRQDFTELFLTRSLHRPQLLFCCKK 91
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.138 0.447 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 453 418 0.00082 118 3 11 22 0.48 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 625 (66 KB)
Total size of DFA: 297 KB (2152 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 34.63u 0.15s 34.78t Elapsed: 00:00:01
Total cpu time: 34.63u 0.15s 34.78t Elapsed: 00:00:01
Start: Sat May 11 00:27:56 2013 End: Sat May 11 00:27:57 2013