Query 045071
Match_columns 453
No_of_seqs 209 out of 2127
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 16:45:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045071.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045071hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 99.9 4.5E-22 1.5E-26 190.2 26.1 246 138-410 25-286 (306)
2 4asc_A Kelch repeat and BTB do 99.9 1.2E-21 4.1E-26 188.1 26.9 243 139-406 15-287 (315)
3 2xn4_A Kelch-like protein 2; s 99.9 1.5E-21 5.2E-26 186.1 26.4 244 138-409 31-290 (302)
4 1zgk_A Kelch-like ECH-associat 99.9 9.8E-22 3.4E-26 188.1 24.3 244 138-409 40-300 (308)
5 2woz_A Kelch repeat and BTB do 99.9 1.1E-20 3.7E-25 181.6 30.6 238 139-402 26-293 (318)
6 2vpj_A Kelch-like protein 12; 99.9 3.7E-21 1.3E-25 183.3 24.4 244 138-409 32-291 (301)
7 3ii7_A Kelch-like protein 7; p 99.8 1.1E-18 3.6E-23 166.6 23.6 218 168-410 11-239 (306)
8 2xn4_A Kelch-like protein 2; s 99.8 1.1E-17 3.7E-22 159.3 24.7 217 168-410 15-243 (302)
9 2vpj_A Kelch-like protein 12; 99.8 8.5E-18 2.9E-22 159.9 24.0 216 167-410 13-245 (301)
10 1zgk_A Kelch-like ECH-associat 99.8 4.9E-18 1.7E-22 162.3 21.8 222 164-410 20-254 (308)
11 2uvk_A YJHT; unknown function, 99.8 7.2E-18 2.5E-22 164.5 22.2 250 138-406 32-352 (357)
12 2uvk_A YJHT; unknown function, 99.8 1.2E-17 3.9E-22 163.0 20.9 229 159-410 10-308 (357)
13 4asc_A Kelch repeat and BTB do 99.8 2E-17 7E-22 158.5 21.1 203 139-354 69-287 (315)
14 2woz_A Kelch repeat and BTB do 99.7 6E-17 2E-21 155.4 17.1 199 139-350 80-293 (318)
15 2zwa_A Leucine carboxyl methyl 99.6 1.4E-14 4.8E-19 153.4 23.3 222 160-403 389-642 (695)
16 1k3i_A Galactose oxidase precu 99.6 9E-15 3.1E-19 154.3 21.5 247 138-410 167-511 (656)
17 2zwa_A Leucine carboxyl methyl 99.6 7.9E-14 2.7E-18 147.6 20.7 228 138-384 413-673 (695)
18 1k3i_A Galactose oxidase precu 99.5 2.1E-12 7.2E-17 136.2 19.3 228 139-384 221-529 (656)
19 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 1.4E-10 4.6E-15 79.3 2.5 46 48-93 6-51 (53)
20 2e31_A FBS1, F-box only protei 98.8 1.2E-09 4.2E-14 101.3 1.8 56 42-97 42-98 (297)
21 2ovr_B FBW7, F-BOX/WD repeat p 98.5 3.2E-05 1.1E-09 76.7 24.7 47 48-94 16-62 (445)
22 3v7d_B Cell division control p 98.5 2.5E-05 8.7E-10 77.7 22.8 44 48-91 12-56 (464)
23 1p22_A F-BOX/WD-repeat protein 98.4 5.4E-06 1.9E-10 82.1 15.4 48 47-94 7-58 (435)
24 3l2o_B F-box only protein 4; s 97.6 9E-06 3.1E-10 74.6 0.4 49 49-97 3-51 (312)
25 2ast_B S-phase kinase-associat 97.5 2.7E-05 9.4E-10 74.2 2.2 44 48-91 6-49 (336)
26 2p1m_B Transport inhibitor res 97.1 0.00011 3.7E-09 75.9 1.7 39 46-84 1-40 (594)
27 3dsm_A Uncharacterized protein 96.8 0.16 5.5E-06 47.6 20.8 226 139-399 19-256 (328)
28 3hfq_A Uncharacterized protein 96.3 0.11 3.9E-06 48.7 16.1 239 140-402 21-278 (347)
29 1npe_A Nidogen, entactin; glyc 95.9 0.91 3.1E-05 40.7 20.3 189 167-399 46-241 (267)
30 3dsm_A Uncharacterized protein 95.8 1.2 4.2E-05 41.5 21.3 183 180-400 16-216 (328)
31 3ogk_B Coronatine-insensitive 95.4 0.0036 1.2E-07 64.4 1.2 33 52-84 14-47 (592)
32 3mbr_X Glutamine cyclotransfer 95.3 0.25 8.7E-06 44.2 12.6 109 268-399 26-136 (243)
33 3nol_A Glutamine cyclotransfer 95.2 1.8 6E-05 39.1 18.0 187 209-432 47-235 (262)
34 3m0c_C LDL receptor, low-densi 95.0 4.3 0.00015 43.0 23.3 188 167-397 434-633 (791)
35 3mbr_X Glutamine cyclotransfer 94.7 1.7 5.9E-05 38.8 16.5 188 209-432 25-214 (243)
36 3v65_B Low-density lipoprotein 94.7 3.1 0.00011 39.8 22.4 188 166-397 125-319 (386)
37 1ijq_A LDL receptor, low-densi 94.7 2.8 9.4E-05 38.9 24.1 188 166-398 39-240 (316)
38 3q7m_A Lipoprotein YFGL, BAMB; 94.6 3 0.0001 39.3 25.2 190 163-401 98-301 (376)
39 3q7m_A Lipoprotein YFGL, BAMB; 94.6 3.1 0.00011 39.2 20.8 196 166-399 51-261 (376)
40 2z2n_A Virginiamycin B lyase; 94.5 2.5 8.6E-05 37.9 19.0 211 140-398 81-297 (299)
41 1l0q_A Surface layer protein; 94.3 1.9 6.4E-05 40.7 17.1 190 166-399 40-236 (391)
42 3nok_A Glutaminyl cyclase; bet 94.3 0.24 8.1E-06 45.0 9.8 108 268-399 60-167 (268)
43 1ri6_A Putative isomerase YBHE 94.3 0.9 3.1E-05 41.8 14.5 117 274-402 142-270 (343)
44 3vgz_A Uncharacterized protein 94.2 3.3 0.00011 38.1 23.7 225 139-401 71-308 (353)
45 1l0q_A Surface layer protein; 94.2 2.1 7.3E-05 40.3 17.3 187 170-400 3-193 (391)
46 3u4y_A Uncharacterized protein 94.1 3.4 0.00012 37.8 20.5 195 182-406 109-314 (331)
47 3nol_A Glutamine cyclotransfer 93.7 0.38 1.3E-05 43.6 9.9 109 268-399 48-158 (262)
48 3jrp_A Fusion protein of prote 93.6 3.8 0.00013 38.0 17.7 139 236-398 80-242 (379)
49 2iwa_A Glutamine cyclotransfer 93.5 3.7 0.00013 37.2 16.4 160 208-399 24-184 (266)
50 2iwa_A Glutamine cyclotransfer 93.0 0.72 2.5E-05 41.9 10.8 104 273-398 32-137 (266)
51 3v64_C Agrin; beta propeller, 92.8 6.4 0.00022 37.0 24.0 187 166-397 82-276 (349)
52 3hrp_A Uncharacterized protein 92.6 7.7 0.00026 37.3 23.0 210 165-404 138-362 (409)
53 3v65_B Low-density lipoprotein 92.5 7.5 0.00026 37.1 19.4 188 168-398 87-279 (386)
54 1q7f_A NHL, brain tumor CG1071 92.3 5.9 0.0002 35.4 18.2 199 166-402 38-244 (286)
55 1rwi_B Serine/threonine-protei 92.3 5.6 0.00019 35.0 18.5 188 166-398 75-266 (270)
56 3scy_A Hypothetical bacterial 92.0 7.8 0.00027 36.0 17.8 117 272-403 165-300 (361)
57 1n7d_A LDL receptor, low-densi 91.8 3.3 0.00011 43.3 15.5 107 272-399 507-617 (699)
58 1npe_A Nidogen, entactin; glyc 91.7 6.9 0.00024 34.7 16.2 158 208-399 39-201 (267)
59 3p5b_L Low density lipoprotein 91.5 10 0.00034 36.4 21.6 190 166-397 121-321 (400)
60 3bws_A Protein LP49; two-domai 91.0 11 0.00037 35.8 21.0 197 168-399 133-337 (433)
61 3jro_A Fusion protein of prote 90.9 4.7 0.00016 42.3 15.8 138 236-397 78-239 (753)
62 3v64_C Agrin; beta propeller, 90.5 12 0.00039 35.2 19.6 188 168-398 44-236 (349)
63 3u4y_A Uncharacterized protein 90.2 11 0.00036 34.3 16.6 189 168-399 9-210 (331)
64 3hfq_A Uncharacterized protein 89.8 5 0.00017 37.0 13.5 122 272-402 50-178 (347)
65 3no2_A Uncharacterized protein 89.6 8.7 0.0003 34.6 14.6 176 181-399 15-198 (276)
66 3nok_A Glutaminyl cyclase; bet 89.5 5.6 0.00019 35.9 12.7 137 268-432 101-245 (268)
67 1ri6_A Putative isomerase YBHE 89.1 2.3 8E-05 38.9 10.5 140 272-438 188-339 (343)
68 3p5b_L Low density lipoprotein 88.8 17 0.00058 34.8 18.0 183 182-401 93-282 (400)
69 1rwi_B Serine/threonine-protei 88.7 12 0.0004 32.8 18.5 191 165-401 31-227 (270)
70 3m0c_C LDL receptor, low-densi 88.6 27 0.00092 36.9 20.6 110 272-401 482-594 (791)
71 4aez_A CDC20, WD repeat-contai 88.4 16 0.00056 34.4 16.4 193 164-399 99-296 (401)
72 1qks_A Cytochrome CD1 nitrite 88.4 16 0.00053 37.0 16.7 196 168-401 166-378 (567)
73 2aq5_A Coronin-1A; WD40 repeat 88.1 17 0.0006 34.1 18.2 119 272-403 187-308 (402)
74 3azo_A Aminopeptidase; POP fam 87.6 20 0.00069 36.4 17.5 109 272-402 252-375 (662)
75 3fm0_A Protein CIAO1; WDR39,SG 87.5 16 0.00055 33.7 15.4 148 182-353 39-190 (345)
76 2hqs_A Protein TOLB; TOLB, PAL 87.4 21 0.00071 34.1 21.1 218 166-435 187-411 (415)
77 3bws_A Protein LP49; two-domai 85.8 7.1 0.00024 37.2 12.2 100 182-296 102-204 (433)
78 1ijq_A LDL receptor, low-densi 85.8 21 0.00072 32.7 20.9 180 182-400 11-199 (316)
79 1nir_A Nitrite reductase; hemo 85.6 26 0.0009 35.0 16.7 196 166-401 146-360 (543)
80 3fvz_A Peptidyl-glycine alpha- 85.6 16 0.00056 33.4 14.2 117 272-400 101-231 (329)
81 4a0p_A LRP6, LRP-6, low-densit 85.3 35 0.0012 34.9 22.5 185 165-397 45-238 (628)
82 1k8k_C P40, ARP2/3 complex 41 85.3 22 0.00076 32.5 16.4 139 181-341 30-172 (372)
83 2p4o_A Hypothetical protein; p 85.3 12 0.00042 33.9 13.1 106 272-397 42-148 (306)
84 1q7f_A NHL, brain tumor CG1071 85.1 20 0.00068 31.7 17.7 147 166-342 129-280 (286)
85 4a0p_A LRP6, LRP-6, low-densit 84.7 38 0.0013 34.6 21.0 176 182-397 16-198 (628)
86 2z2n_A Virginiamycin B lyase; 84.5 21 0.00071 31.5 22.6 216 140-402 39-260 (299)
87 2qc5_A Streptogramin B lactona 83.4 23 0.00079 31.2 21.0 215 140-401 44-264 (300)
88 3sov_A LRP-6, low-density lipo 83.0 29 0.00098 31.9 20.4 186 167-398 45-240 (318)
89 2ad6_A Methanol dehydrogenase 82.4 11 0.00039 38.0 12.3 116 267-401 57-192 (571)
90 3vgz_A Uncharacterized protein 81.9 30 0.001 31.4 21.1 28 374-401 240-267 (353)
91 1kb0_A Quinohemoprotein alcoho 81.7 11 0.00038 39.0 12.2 116 267-401 72-206 (677)
92 3hrp_A Uncharacterized protein 81.6 22 0.00076 34.0 13.6 112 272-402 141-255 (409)
93 3sjl_D Methylamine dehydrogena 81.3 24 0.00083 33.6 13.5 116 272-399 237-366 (386)
94 4gqb_B Methylosome protein 50; 79.4 39 0.0013 31.2 15.7 104 275-401 184-294 (344)
95 2qc5_A Streptogramin B lactona 79.2 33 0.0011 30.2 20.5 193 164-402 26-223 (300)
96 1erj_A Transcriptional repress 79.0 42 0.0015 31.4 14.6 148 166-342 132-287 (393)
97 1kv9_A Type II quinohemoprotei 78.7 14 0.00046 38.3 11.6 115 267-401 61-194 (668)
98 3sov_A LRP-6, low-density lipo 78.5 41 0.0014 30.9 16.8 109 272-400 90-201 (318)
99 3tc9_A Hypothetical hydrolase; 78.1 49 0.0017 31.8 14.9 112 167-296 148-261 (430)
100 3scy_A Hypothetical bacterial 77.3 44 0.0015 30.6 25.6 119 272-403 221-346 (361)
101 3s94_A LRP-6, low-density lipo 77.2 67 0.0023 32.7 23.4 190 166-401 358-556 (619)
102 1gxr_A ESG1, transducin-like e 76.5 42 0.0014 29.9 18.3 193 166-401 60-260 (337)
103 3dwl_C Actin-related protein 2 76.4 14 0.00049 34.1 10.3 135 181-341 33-176 (377)
104 3vl1_A 26S proteasome regulato 75.8 52 0.0018 30.7 17.6 109 166-295 106-215 (420)
105 3tc9_A Hypothetical hydrolase; 75.6 25 0.00086 34.0 12.0 106 272-399 149-260 (430)
106 4gga_A P55CDC, cell division c 75.6 55 0.0019 30.9 18.6 159 155-344 100-263 (420)
107 1n7d_A LDL receptor, low-densi 74.9 18 0.00062 37.6 11.3 50 272-322 551-601 (699)
108 2xbg_A YCF48-like protein; pho 74.7 51 0.0018 30.2 19.8 179 182-403 57-242 (327)
109 3g4e_A Regucalcin; six bladed 74.6 46 0.0016 29.7 13.0 67 272-353 24-91 (297)
110 3jrp_A Fusion protein of prote 74.6 50 0.0017 30.0 16.5 63 273-343 69-135 (379)
111 1jmx_B Amine dehydrogenase; ox 74.5 12 0.0004 34.1 9.0 26 271-296 9-34 (349)
112 3e5z_A Putative gluconolactona 74.2 45 0.0015 29.6 12.8 116 272-399 79-206 (296)
113 3ei3_B DNA damage-binding prot 74.2 54 0.0019 30.2 17.5 180 182-398 97-284 (383)
114 2dg1_A DRP35, lactonase; beta 73.9 14 0.00047 33.7 9.3 110 272-396 97-213 (333)
115 1yiq_A Quinohemoprotein alcoho 73.9 15 0.00051 38.1 10.4 116 267-401 65-199 (689)
116 3i2n_A WD repeat-containing pr 73.6 51 0.0018 29.7 14.4 23 375-397 332-354 (357)
117 2dg1_A DRP35, lactonase; beta 73.4 33 0.0011 31.0 11.9 113 272-402 55-177 (333)
118 2fp8_A Strictosidine synthase; 73.0 35 0.0012 30.9 11.9 122 181-322 165-300 (322)
119 4e54_B DNA damage-binding prot 72.8 32 0.0011 32.8 12.0 23 272-294 220-242 (435)
120 3g4e_A Regucalcin; six bladed 72.0 54 0.0019 29.2 17.3 190 140-354 38-239 (297)
121 4a11_B DNA excision repair pro 72.0 47 0.0016 30.6 12.8 22 376-398 257-278 (408)
122 3mkq_A Coatomer beta'-subunit; 71.7 56 0.0019 33.9 14.4 22 272-293 108-129 (814)
123 3e5z_A Putative gluconolactona 71.4 55 0.0019 29.0 18.1 101 272-400 182-290 (296)
124 4g56_B MGC81050 protein; prote 71.2 62 0.0021 29.8 13.3 22 376-397 323-344 (357)
125 3no2_A Uncharacterized protein 71.1 50 0.0017 29.4 12.1 142 236-401 16-161 (276)
126 2p4o_A Hypothetical protein; p 70.4 61 0.0021 29.1 18.2 190 167-396 41-242 (306)
127 3dwl_C Actin-related protein 2 69.3 58 0.002 29.8 12.7 29 376-405 262-290 (377)
128 2vdu_B TRNA (guanine-N(7)-)-me 69.2 80 0.0027 30.0 22.4 115 272-402 251-399 (450)
129 1pjx_A Dfpase, DIISOPROPYLFLUO 68.9 62 0.0021 28.6 17.4 108 272-397 186-300 (314)
130 2ovr_B FBW7, F-BOX/WD repeat p 68.8 80 0.0027 29.9 19.5 110 269-399 285-394 (445)
131 4gqb_B Methylosome protein 50; 68.8 70 0.0024 29.4 13.0 189 166-398 136-333 (344)
132 2hz6_A Endoplasmic reticulum t 68.5 14 0.00049 34.8 8.1 107 166-297 7-118 (369)
133 3mkq_A Coatomer beta'-subunit; 68.4 1.1E+02 0.0039 31.5 19.6 175 181-399 77-262 (814)
134 2pm9_A Protein WEB1, protein t 67.6 52 0.0018 30.5 12.1 62 272-343 274-338 (416)
135 1w6s_A Methanol dehydrogenase 66.5 34 0.0012 34.8 10.9 116 267-401 57-198 (599)
136 1p22_A F-BOX/WD-repeat protein 66.2 58 0.002 30.8 12.2 103 271-398 141-244 (435)
137 1flg_A Protein (quinoprotein e 66.2 60 0.002 32.8 12.7 115 267-401 63-198 (582)
138 2fp8_A Strictosidine synthase; 66.0 76 0.0026 28.6 13.2 205 168-397 91-314 (322)
139 4g56_B MGC81050 protein; prote 66.0 82 0.0028 29.0 17.1 210 166-431 103-321 (357)
140 3fm0_A Protein CIAO1; WDR39,SG 65.0 83 0.0028 28.7 16.3 110 272-401 72-186 (345)
141 4hw6_A Hypothetical protein, I 65.0 75 0.0025 30.6 12.7 109 168-295 152-262 (433)
142 1pjx_A Dfpase, DIISOPROPYLFLUO 64.7 48 0.0017 29.4 10.8 109 273-395 83-206 (314)
143 1k8k_C P40, ARP2/3 complex 41 64.3 83 0.0028 28.4 16.0 136 236-395 31-172 (372)
144 2ojh_A Uncharacterized protein 64.0 71 0.0024 27.5 18.6 184 179-403 20-213 (297)
145 3fvz_A Peptidyl-glycine alpha- 62.7 90 0.0031 28.2 23.6 207 166-397 99-323 (329)
146 2be1_A Serine/threonine-protei 60.0 26 0.00088 32.8 7.9 112 270-401 8-135 (339)
147 2vdu_B TRNA (guanine-N(7)-)-me 59.8 1.2E+02 0.0041 28.8 16.6 110 273-394 210-337 (450)
148 1gxr_A ESG1, transducin-like e 59.8 93 0.0032 27.5 15.0 60 272-342 235-296 (337)
149 2hz6_A Endoplasmic reticulum t 59.6 8.9 0.0003 36.2 4.8 130 237-401 21-156 (369)
150 1kv9_A Type II quinohemoprotei 58.7 1.6E+02 0.0056 30.0 19.3 117 166-298 64-195 (668)
151 4ery_A WD repeat-containing pr 58.3 99 0.0034 27.3 14.5 102 273-398 119-225 (312)
152 2mad_H Methylamine dehydrogena 58.1 1E+02 0.0035 28.8 12.0 118 272-400 224-354 (373)
153 2hes_X YDR267CP; beta-propelle 57.8 86 0.0029 28.3 11.3 54 282-342 270-328 (330)
154 2kwv_A RAD30 homolog B, DNA po 55.8 5.6 0.00019 24.8 1.6 25 44-68 14-38 (48)
155 3jro_A Fusion protein of prote 54.6 80 0.0027 32.8 11.6 104 273-397 21-133 (753)
156 3zwl_B Eukaryotic translation 53.5 1.2E+02 0.0042 27.0 16.0 24 375-399 229-252 (369)
157 4ery_A WD repeat-containing pr 53.4 1.2E+02 0.0041 26.8 19.7 110 272-399 160-271 (312)
158 1r5m_A SIR4-interacting protei 53.3 1.4E+02 0.0047 27.4 17.5 102 272-399 217-322 (425)
159 3dr2_A Exported gluconolactona 53.1 91 0.0031 27.8 10.5 115 272-398 96-226 (305)
160 3v7d_B Cell division control p 53.0 79 0.0027 30.0 10.6 97 279-400 328-425 (464)
161 1jof_A Carboxy-CIS,CIS-muconat 53.0 1.1E+02 0.0036 28.2 11.2 120 272-401 155-297 (365)
162 1got_B GT-beta; complex (GTP-b 53.0 1.3E+02 0.0045 27.1 17.2 101 272-398 154-259 (340)
163 3c75_H MADH, methylamine dehyd 52.3 1.4E+02 0.0049 28.6 12.1 116 273-399 277-405 (426)
164 3s94_A LRP-6, low-density lipo 52.2 2E+02 0.0069 29.1 21.3 158 206-399 350-513 (619)
165 1pby_B Quinohemoprotein amine 51.8 1.3E+02 0.0043 26.6 11.4 20 277-296 5-24 (337)
166 2ad6_A Methanol dehydrogenase 51.7 1.4E+02 0.0049 29.8 12.5 116 167-298 61-193 (571)
167 1yiq_A Quinohemoprotein alcoho 51.5 2.2E+02 0.0074 29.2 19.7 117 166-298 68-200 (689)
168 3c75_H MADH, methylamine dehyd 50.7 1.5E+02 0.005 28.5 11.9 119 273-399 85-212 (426)
169 3k26_A Polycomb protein EED; W 49.8 1.4E+02 0.0048 26.6 19.4 65 316-396 299-366 (366)
170 1kb0_A Quinohemoprotein alcoho 48.9 2.3E+02 0.008 28.9 19.5 115 167-298 76-207 (677)
171 2hes_X YDR267CP; beta-propelle 48.2 1.5E+02 0.0053 26.5 14.8 113 272-402 164-286 (330)
172 1qks_A Cytochrome CD1 nitrite 47.6 74 0.0025 32.0 9.6 107 272-399 166-278 (567)
173 2ghs_A AGR_C_1268P; regucalcin 47.3 1.6E+02 0.0055 26.5 12.3 108 271-395 99-209 (326)
174 2pm9_A Protein WEB1, protein t 47.2 1.7E+02 0.0058 26.8 15.0 95 284-398 241-339 (416)
175 2z3z_A Dipeptidyl aminopeptida 47.1 2.4E+02 0.0082 28.4 17.8 192 180-398 234-437 (706)
176 3f3f_A Nucleoporin SEH1; struc 47.0 1.5E+02 0.0051 26.0 12.8 107 273-398 23-145 (351)
177 3sfz_A APAF-1, apoptotic pepti 46.1 1.3E+02 0.0045 33.0 12.2 103 272-399 1055-1161(1249)
178 3c5m_A Oligogalacturonate lyas 45.7 1.7E+02 0.006 26.5 14.0 146 181-349 216-389 (396)
179 4a2l_A BT_4663, two-component 45.4 2.8E+02 0.0095 28.7 24.9 225 140-403 238-487 (795)
180 4aow_A Guanine nucleotide-bind 44.8 1.6E+02 0.0056 25.9 17.1 24 272-295 226-249 (340)
181 2ojh_A Uncharacterized protein 44.3 1.5E+02 0.0051 25.3 18.0 101 284-402 154-264 (297)
182 2hqs_A Protein TOLB; TOLB, PAL 44.3 2.1E+02 0.007 26.9 19.2 180 139-347 205-390 (415)
183 3pe7_A Oligogalacturonate lyas 42.8 1.9E+02 0.0066 26.2 11.9 107 283-402 168-279 (388)
184 2ynn_A Coatomer subunit beta'; 42.8 1.8E+02 0.006 25.7 15.7 20 379-398 200-219 (304)
185 1yr2_A Prolyl oligopeptidase; 42.5 3E+02 0.01 28.2 19.2 112 271-403 326-448 (741)
186 4aez_A CDC20, WD repeat-contai 42.0 1.9E+02 0.0064 26.7 11.1 103 272-398 145-250 (401)
187 1nir_A Nitrite reductase; hemo 41.2 95 0.0032 30.8 9.2 106 272-399 148-260 (543)
188 4e54_B DNA damage-binding prot 40.4 2.4E+02 0.0081 26.5 11.7 105 272-398 176-284 (435)
189 2z3z_A Dipeptidyl aminopeptida 40.3 3E+02 0.01 27.7 19.7 115 272-403 268-398 (706)
190 3qqz_A Putative uncharacterize 39.9 2E+02 0.0067 25.4 11.0 111 272-393 38-150 (255)
191 2ghs_A AGR_C_1268P; regucalcin 39.9 1.5E+02 0.0051 26.8 9.8 66 273-353 61-127 (326)
192 1yfq_A Cell cycle arrest prote 39.8 2E+02 0.0068 25.4 17.9 63 271-343 159-226 (342)
193 2p9w_A MAL S 1 allergenic prot 39.4 1.7E+02 0.0056 27.2 9.7 110 272-395 76-214 (334)
194 3k26_A Polycomb protein EED; W 39.3 1.3E+02 0.0045 26.8 9.4 104 273-398 85-194 (366)
195 2aq5_A Coronin-1A; WD40 repeat 39.2 2.3E+02 0.0079 26.0 21.1 104 275-398 146-256 (402)
196 3b7f_A Glycosyl hydrolase, BNR 38.6 2.4E+02 0.0083 26.1 16.6 116 272-403 128-269 (394)
197 1got_B GT-beta; complex (GTP-b 37.4 1.7E+02 0.0058 26.3 9.8 106 273-399 67-176 (340)
198 3kya_A Putative phosphatase; s 37.1 1.7E+02 0.0058 28.8 10.0 108 273-395 152-277 (496)
199 3o4h_A Acylamino-acid-releasin 37.0 2E+02 0.0068 28.3 10.9 113 269-401 117-232 (582)
200 3mmy_A MRNA export factor; mRN 36.7 2.3E+02 0.0077 25.2 11.4 104 272-398 53-162 (368)
201 4hw6_A Hypothetical protein, I 36.4 1.9E+02 0.0065 27.6 10.2 110 268-399 143-262 (433)
202 2bkl_A Prolyl endopeptidase; m 36.3 3.5E+02 0.012 27.3 19.2 117 269-403 278-404 (695)
203 2oiz_A Aromatic amine dehydrog 36.2 2.6E+02 0.0087 25.6 13.0 72 336-432 287-358 (361)
204 1jmx_B Amine dehydrogenase; ox 35.6 95 0.0032 27.7 7.7 27 374-400 52-78 (349)
205 1w6s_A Methanol dehydrogenase 35.6 3.6E+02 0.012 27.1 19.6 119 167-298 61-199 (599)
206 3vl1_A 26S proteasome regulato 34.5 2.7E+02 0.0093 25.5 21.5 104 272-396 258-365 (420)
207 1pby_B Quinohemoprotein amine 33.2 2.5E+02 0.0084 24.6 13.1 25 272-296 44-69 (337)
208 3sre_A PON1, serum paraoxonase 32.7 3.1E+02 0.01 25.5 11.4 69 282-355 82-161 (355)
209 3sfz_A APAF-1, apoptotic pepti 31.2 5.4E+02 0.019 27.9 16.3 144 166-342 624-774 (1249)
210 2pbi_B Guanine nucleotide-bind 31.0 3E+02 0.01 24.9 18.0 93 281-398 174-273 (354)
211 3ott_A Two-component system se 30.6 3.4E+02 0.012 27.8 11.7 105 272-400 482-590 (758)
212 3gre_A Serine/threonine-protei 30.4 3.3E+02 0.011 25.2 18.0 102 273-398 182-294 (437)
213 1vyh_C Platelet-activating fac 30.2 3.3E+02 0.011 25.2 18.3 60 272-341 203-264 (410)
214 3odt_A Protein DOA1; ubiquitin 29.9 2.7E+02 0.0092 24.0 19.4 22 376-398 195-216 (313)
215 2ece_A 462AA long hypothetical 29.8 2.5E+02 0.0086 27.3 9.6 118 282-403 227-360 (462)
216 2xyi_A Probable histone-bindin 29.7 86 0.0029 29.6 6.5 101 272-396 243-353 (430)
217 3lrv_A PRE-mRNA-splicing facto 29.6 3E+02 0.01 24.5 17.0 198 163-401 89-299 (343)
218 3a0f_A Xyloglucanase; beta-pro 28.7 5.1E+02 0.017 26.8 13.3 141 238-403 569-724 (763)
219 3dr2_A Exported gluconolactona 28.5 3E+02 0.01 24.1 11.7 103 181-301 169-276 (305)
220 3pe7_A Oligogalacturonate lyas 28.3 3.3E+02 0.011 24.5 14.0 26 374-399 360-387 (388)
221 3kya_A Putative phosphatase; s 27.7 4.4E+02 0.015 25.8 11.9 116 167-291 150-277 (496)
222 3ju4_A Endo-N-acetylneuraminid 27.6 2E+02 0.0067 27.6 7.9 56 269-324 345-406 (670)
223 3odt_A Protein DOA1; ubiquitin 27.4 2E+02 0.0067 24.9 8.2 62 271-342 27-90 (313)
224 2qe8_A Uncharacterized protein 27.2 1.5E+02 0.005 27.0 7.4 82 315-403 77-162 (343)
225 4gga_A P55CDC, cell division c 27.2 3.8E+02 0.013 24.8 11.9 49 272-323 158-206 (420)
226 1erj_A Transcriptional repress 27.1 3.3E+02 0.011 24.9 10.1 103 272-399 134-241 (393)
227 1flg_A Protein (quinoprotein e 26.9 2.9E+02 0.0099 27.6 10.0 79 238-325 469-549 (582)
228 3ow8_A WD repeat-containing pr 26.5 3.4E+02 0.012 24.1 17.1 103 272-399 175-282 (321)
229 3c5m_A Oligogalacturonate lyas 26.4 3.6E+02 0.012 24.3 10.7 110 275-403 203-336 (396)
230 3hxj_A Pyrrolo-quinoline quino 26.0 3.3E+02 0.011 23.8 10.2 49 268-320 103-152 (330)
231 3bg1_A Protein SEC13 homolog; 26.0 3.4E+02 0.012 23.9 14.1 52 334-396 190-247 (316)
232 2qe8_A Uncharacterized protein 25.6 3.3E+02 0.011 24.5 9.6 51 272-322 77-138 (343)
233 4ggc_A P55CDC, cell division c 25.2 3.3E+02 0.011 23.5 18.6 65 166-244 34-98 (318)
234 3iz6_a 40S ribosomal protein R 24.8 4E+02 0.014 24.2 17.8 100 282-399 179-283 (380)
235 3bg1_A Protein SEC13 homolog; 24.8 2.6E+02 0.0088 24.7 8.6 111 273-400 25-141 (316)
236 1pgu_A Actin interacting prote 23.7 4E+02 0.014 25.8 10.4 101 272-396 499-614 (615)
237 3sjl_D Methylamine dehydrogena 23.3 4.7E+02 0.016 24.6 12.1 118 272-399 44-172 (386)
238 1jof_A Carboxy-CIS,CIS-muconat 22.9 4.2E+02 0.014 23.9 11.8 29 374-402 154-183 (365)
239 1cn3_F Fragment of coat protei 22.5 43 0.0015 17.8 1.4 9 55-63 17-25 (29)
240 3v9f_A Two-component system se 22.2 6.4E+02 0.022 25.8 23.5 182 181-402 427-617 (781)
241 2xe4_A Oligopeptidase B; hydro 22.2 3.3E+02 0.011 28.1 9.6 63 272-342 330-398 (751)
242 3sil_A Sialidase; glycosidase, 21.4 1.1E+02 0.0038 28.9 5.2 60 284-351 204-264 (379)
243 1sq9_A Antiviral protein SKI8; 21.1 4.5E+02 0.015 23.6 18.4 117 272-399 197-325 (397)
244 1mda_H Methylamine dehydrogena 20.3 3.4E+02 0.012 25.2 8.5 114 272-399 222-349 (368)
245 4a2l_A BT_4663, two-component 20.1 7.1E+02 0.024 25.5 20.8 109 272-403 141-251 (795)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.90 E-value=4.5e-22 Score=190.15 Aligned_cols=246 Identities=16% Similarity=0.165 Sum_probs=185.0
Q ss_pred cceeeeCCCCCeEeccCCCCCCCCeeeeecCceEEEEecCC--CCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCC
Q 045071 138 EGYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDHA--GAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPT 215 (453)
Q Consensus 138 ~~~~fdp~~~~w~~l~l~~lp~~~~~~~s~~Gll~~~~~~~--~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~ 215 (453)
....||+.+++|..++....++..+.++..+|.|++.++.. ....++++||.+++|..+++++.+|..+.+... +
T Consensus 25 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~-- 101 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA-E-- 101 (306)
T ss_dssp SEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE-T--
T ss_pred eEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE-C--
Confidence 45689999999999974444565555666788888777633 235789999999999999999988877654433 3
Q ss_pred ceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC---------CCEEE
Q 045071 216 AVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS---------PFSVL 286 (453)
Q Consensus 216 ~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~---------~~~i~ 286 (453)
.+||++|+..... .....+++||+.+ ++|+.++++|.. .....++.++|++|++++. ...+.
T Consensus 102 -~~iyv~GG~~~~~--~~~~~~~~~d~~~----~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 102 -GKIYTSGGSEVGN--SALYLFECYDTRT----ESWHTKPSMLTQ--RCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp -TEEEEECCBBTTB--SCCCCEEEEETTT----TEEEEECCCSSC--CBSCEEEEETTEEEEECCEESCTTTCEECCCEE
T ss_pred -CEEEEECCCCCCC--cEeeeEEEEeCCC----CceEeCCCCcCC--cceeEEEEECCEEEEECCCCCCCCcccccceEE
Confidence 3899998853111 1245679999999 999999888763 2335578899999999642 35699
Q ss_pred EEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccC
Q 045071 287 AYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEA 366 (453)
Q Consensus 287 ~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~ 366 (453)
+||+.+++|+.+. ++|..+..+.++..+++||++|+..... ..-.+|.+|..+++|+++..||..
T Consensus 173 ~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~p~~---------- 237 (306)
T 3ii7_A 173 VYDPATETWTELC-PMIEARKNHGLVFVKDKIFAVGGQNGLG----GLDNVEYYDIKLNEWKMVSPMPWK---------- 237 (306)
T ss_dssp EEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEECCEETTE----EBCCEEEEETTTTEEEECCCCSCC----------
T ss_pred EeCCCCCeEEECC-CccchhhcceEEEECCEEEEEeCCCCCC----CCceEEEeeCCCCcEEECCCCCCC----------
Confidence 9999999999984 5555556667788899999999875431 112688889989999999888752
Q ss_pred CCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCceEEcCCCCCcCC
Q 045071 367 GNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKSWQWIPRCPYVQA 410 (453)
Q Consensus 367 ~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~W~~l~~~p~~~~ 410 (453)
+....++..++.||+.+.. ...+.+||+++++|+.++.+|..+.
T Consensus 238 r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~ 286 (306)
T 3ii7_A 238 GVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRAFPV 286 (306)
T ss_dssp BSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEECCSC
T ss_pred ccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCcccccc
Confidence 1234455668999998652 4689999999999999988875543
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.90 E-value=1.2e-21 Score=188.11 Aligned_cols=243 Identities=16% Similarity=0.199 Sum_probs=178.9
Q ss_pred ceeeeCCCCCeEeccCCC-CCCCCeeeeecCceEEEEecC-----CC----CeeEEEEcCcccceecCCCCCCCCCcceE
Q 045071 139 GYLFDPHELSWYRISFAL-VPSEFSPASSSGGLVCWVSDH-----AG----AKTLILCNPVTGSLSQLPPTLRPRLFPSI 208 (453)
Q Consensus 139 ~~~fdp~~~~w~~l~l~~-lp~~~~~~~s~~Gll~~~~~~-----~~----~~~~~v~NP~T~~w~~LP~~~~~r~~~~~ 208 (453)
...|||.+++|...++|. .|+..+.++..+|.|++.++. .. ...++++||.+++|..+++++.+|..+.+
T Consensus 15 ~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 94 (315)
T 4asc_A 15 AVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGL 94 (315)
T ss_dssp EEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEE
T ss_pred eEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeE
Confidence 468999999998755553 356556666677877776652 11 23489999999999999999988877654
Q ss_pred EEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC------C
Q 045071 209 GLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS------P 282 (453)
Q Consensus 209 ~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~------~ 282 (453)
+.. + .+|+++|+............+++||..+ ++|+.++++|.. .....++.+++++|++++. .
T Consensus 95 ~~~-~---~~lyv~GG~~~~~~~~~~~~~~~~d~~~----~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~ 164 (315)
T 4asc_A 95 GEA-L---NSIYVVGGREIKDGERCLDSVMCYDRLS----FKWGESDPLPYV--VYGHTVLSHMDLVYVIGGKGSDRKCL 164 (315)
T ss_dssp EEE-T---TEEEEECCEESSTTCCBCCCEEEEETTT----TEEEECCCCSSC--CBSCEEEEETTEEEEECCBCTTSCBC
T ss_pred EEE-C---CEEEEEeCCcCCCCCcccceEEEECCCC----CcEeECCCCCCc--ccceeEEEECCEEEEEeCCCCCCccc
Confidence 443 2 3899998842111111346789999999 999999988863 2335578899999999764 2
Q ss_pred CEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhh
Q 045071 283 FSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFA 362 (453)
Q Consensus 283 ~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~ 362 (453)
..+.+||+.+++|+.+. ++|..+..+.++..+++||++|+..... ..-.+|.+|..+++|+++..||..
T Consensus 165 ~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~p~~------ 233 (315)
T 4asc_A 165 NKMCVYDPKKFEWKELA-PMQTARSLFGATVHDGRIIVAAGVTDTG----LTSSAEVYSITDNKWAPFEAFPQE------ 233 (315)
T ss_dssp CCEEEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEEEEECSSS----EEEEEEEEETTTTEEEEECCCSSC------
T ss_pred ceEEEEeCCCCeEEECC-CCCCchhceEEEEECCEEEEEeccCCCC----ccceEEEEECCCCeEEECCCCCCc------
Confidence 57999999999999884 5555556667788999999999975432 123789999999999999888752
Q ss_pred cccCCCcEEEEeeCCEEEEEEcC--------------CCeEEEEECCCCceEEcCCCC
Q 045071 363 EIEAGNGFDTIGHGEFIVIVIRG--------------SDKALLFDLCMKSWQWIPRCP 406 (453)
Q Consensus 363 ~~~~~~~~~~~~~g~~I~l~~~~--------------~~~v~~Yd~~~~~W~~l~~~p 406 (453)
+....++..++.||+.+.. ...+.+||+++++|+.++..|
T Consensus 234 ----r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 287 (315)
T 4asc_A 234 ----RSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREI 287 (315)
T ss_dssp ----CBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCS
T ss_pred ----ccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCC
Confidence 1233455668899987542 246899999999999995555
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.90 E-value=1.5e-21 Score=186.09 Aligned_cols=244 Identities=15% Similarity=0.121 Sum_probs=180.1
Q ss_pred cceeeeCCCCCeEeccCCCCCCCCeeeeecCceEEEEecCCC---CeeEEEEcCcccceecCCCCCCCCCcceEEEEEcC
Q 045071 138 EGYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDHAG---AKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTP 214 (453)
Q Consensus 138 ~~~~fdp~~~~w~~l~l~~lp~~~~~~~s~~Gll~~~~~~~~---~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~ 214 (453)
....||+.+++|..++....++..+.++..+|.|++.++... ...++++||.+++|..+++++.+|..+.+++. +
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~- 108 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-N- 108 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T-
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE-C-
Confidence 356899999999998733334544455566888887776322 34789999999999999999988877654443 3
Q ss_pred CceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC-------CCEEEE
Q 045071 215 TAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS-------PFSVLA 287 (453)
Q Consensus 215 ~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~-------~~~i~~ 287 (453)
.+||++|+..... ....+++||..+ ++|+.++++|.. .....++.++|++|++++. ...+..
T Consensus 109 --~~iyv~GG~~~~~---~~~~~~~~d~~~----~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~ 177 (302)
T 2xn4_A 109 --GLLYAVGGFDGST---GLSSVEAYNIKS----NEWFHVAPMNTR--RSSVGVGVVGGLLYAVGGYDVASRQCLSTVEC 177 (302)
T ss_dssp --TEEEEEEEECSSC---EEEEEEEEETTT----TEEEEECCCSSC--CBSCEEEEETTEEEEECCEETTTTEECCCEEE
T ss_pred --CEEEEEcCCCCCc---cCceEEEEeCCC----CeEeecCCCCCc--ccCceEEEECCEEEEEeCCCCCCCccccEEEE
Confidence 3899988753221 235679999999 999999888753 2335578899999999642 246999
Q ss_pred EECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCC
Q 045071 288 YDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAG 367 (453)
Q Consensus 288 yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~ 367 (453)
||+.+++|+.+ .++|..+..+.++..+++||++|+..... ..-.+|.+|..+++|+++..||.. +
T Consensus 178 yd~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~~~~----------r 242 (302)
T 2xn4_A 178 YNATTNEWTYI-AEMSTRRSGAGVGVLNNLLYAVGGHDGPL----VRKSVEVYDPTTNAWRQVADMNMC----------R 242 (302)
T ss_dssp EETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCBSSSS----BCCCEEEEETTTTEEEEECCCSSC----------C
T ss_pred EeCCCCcEEEC-CCCccccccccEEEECCEEEEECCCCCCc----ccceEEEEeCCCCCEeeCCCCCCc----------c
Confidence 99999999998 34555455667788999999999865421 112688889989999999988752 1
Q ss_pred CcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCceEEcC-CCCCcC
Q 045071 368 NGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKSWQWIP-RCPYVQ 409 (453)
Q Consensus 368 ~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~W~~l~-~~p~~~ 409 (453)
....++..++.||+.+.. ...+.+||+++++|+.++ .+|..+
T Consensus 243 ~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~r 290 (302)
T 2xn4_A 243 RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMSTGR 290 (302)
T ss_dssp BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCSSCC
T ss_pred ccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccCccc
Confidence 233455578999998652 357999999999999997 566543
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.89 E-value=9.8e-22 Score=188.11 Aligned_cols=244 Identities=16% Similarity=0.179 Sum_probs=182.3
Q ss_pred cceeeeCCCCCeEeccCCCCCCCCeeeeecCceEEEEecC----CC---CeeEEEEcCcccceecCCCCCCCCCcceEEE
Q 045071 138 EGYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDH----AG---AKTLILCNPVTGSLSQLPPTLRPRLFPSIGL 210 (453)
Q Consensus 138 ~~~~fdp~~~~w~~l~l~~lp~~~~~~~s~~Gll~~~~~~----~~---~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~ 210 (453)
....||+.+++|..++....++....++..++.|++.++. .. ...++++||.+++|..+++++.+|..+.++.
T Consensus 40 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~ 119 (308)
T 1zgk_A 40 YLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV 119 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE
T ss_pred eEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE
Confidence 4578999999999987433455555556668888887764 11 2468999999999999999998887765444
Q ss_pred EEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC-----CCEE
Q 045071 211 KVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS-----PFSV 285 (453)
Q Consensus 211 ~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i 285 (453)
. + .+||++|+..... ....+++||..+ ++|+.+.++|.. .....+++++++||++++. ...+
T Consensus 120 ~-~---~~iyv~GG~~~~~---~~~~~~~yd~~~----~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~ 186 (308)
T 1zgk_A 120 I-D---GHIYAVGGSHGCI---HHNSVERYEPER----DEWHLVAPMLTR--RIGVGVAVLNRLLYAVGGFDGTNRLNSA 186 (308)
T ss_dssp E-T---TEEEEECCEETTE---ECCCEEEEETTT----TEEEECCCCSSC--CBSCEEEEETTEEEEECCBCSSCBCCCE
T ss_pred E-C---CEEEEEcCCCCCc---ccccEEEECCCC----CeEeECCCCCcc--ccceEEEEECCEEEEEeCCCCCCcCceE
Confidence 3 3 3899998853221 245679999999 999999888753 2335578889999999753 2579
Q ss_pred EEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhccc
Q 045071 286 LAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIE 365 (453)
Q Consensus 286 ~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~ 365 (453)
..||+.+++|+.+. ++|..+....++..+++||++|+..... ..-.+|.+|..+++|+++..||..
T Consensus 187 ~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~~--------- 252 (308)
T 1zgk_A 187 ECYYPERNEWRMIT-AMNTIRSGAGVCVLHNCIYAAGGYDGQD----QLNSVERYDVETETWTFVAPMKHR--------- 252 (308)
T ss_dssp EEEETTTTEEEECC-CCSSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEECCCCSSC---------
T ss_pred EEEeCCCCeEeeCC-CCCCccccceEEEECCEEEEEeCCCCCC----ccceEEEEeCCCCcEEECCCCCCC---------
Confidence 99999999999884 4554455567778899999999865431 123688889889999999888752
Q ss_pred CCCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCceEEcCCCCCcC
Q 045071 366 AGNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKSWQWIPRCPYVQ 409 (453)
Q Consensus 366 ~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~W~~l~~~p~~~ 409 (453)
+....++..++.||+.+.. ...+.+||+++++|+.++.+|..+
T Consensus 253 -r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 300 (308)
T 1zgk_A 253 -RSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGR 300 (308)
T ss_dssp -CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC
T ss_pred -ccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCCCCCc
Confidence 1233455568999998642 468999999999999998888654
No 5
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.89 E-value=1.1e-20 Score=181.65 Aligned_cols=238 Identities=16% Similarity=0.255 Sum_probs=176.5
Q ss_pred ceeeeCCCCCeEeccCCC-CCCCCeeeeecCceEEEEecCC----C-----CeeEEEEcCcccceecCCCCCCCCCcceE
Q 045071 139 GYLFDPHELSWYRISFAL-VPSEFSPASSSGGLVCWVSDHA----G-----AKTLILCNPVTGSLSQLPPTLRPRLFPSI 208 (453)
Q Consensus 139 ~~~fdp~~~~w~~l~l~~-lp~~~~~~~s~~Gll~~~~~~~----~-----~~~~~v~NP~T~~w~~LP~~~~~r~~~~~ 208 (453)
...|||.+++|...+++. .|+..+.++..+|.|++.++.. . ...++++||.+++|..+++++.+|..+.+
T Consensus 26 ~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 105 (318)
T 2woz_A 26 AVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGL 105 (318)
T ss_dssp EEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEE
T ss_pred eEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccce
Confidence 468999999999866553 4666666677788888777621 1 12388999999999999999998876654
Q ss_pred EEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC------C
Q 045071 209 GLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS------P 282 (453)
Q Consensus 209 ~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~------~ 282 (453)
+.. + .+||++|+..... ......+++||+.+ ++|+.++++|..+ ..+.+++++|+||++++. .
T Consensus 106 ~~~-~---~~iyv~GG~~~~~-~~~~~~~~~yd~~~----~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 106 GEV-D---DKIYVVAGKDLQT-EASLDSVLCYDPVA----AKWSEVKNLPIKV--YGHNVISHNGMIYCLGGKTDDKKCT 174 (318)
T ss_dssp EEE-T---TEEEEEEEEBTTT-CCEEEEEEEEETTT----TEEEEECCCSSCE--ESCEEEEETTEEEEECCEESSSCBC
T ss_pred EEE-C---CEEEEEcCccCCC-CcccceEEEEeCCC----CCEeECCCCCCcc--cccEEEEECCEEEEEcCCCCCCCcc
Confidence 443 3 3899998753111 11245679999999 9999998887632 335577899999999752 2
Q ss_pred CEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhh
Q 045071 283 FSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFA 362 (453)
Q Consensus 283 ~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~ 362 (453)
..+.+||+.+++|+.+. ++|..+..+.++..+++||++|+..... ..-.+|.+|..+++|+++..||..
T Consensus 175 ~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~p~~------ 243 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLA-PMKTPRSMFGVAIHKGKIVIAGGVTEDG----LSASVEAFDLKTNKWEVMTEFPQE------ 243 (318)
T ss_dssp CCEEEEETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEEEEEETTE----EEEEEEEEETTTCCEEECCCCSSC------
T ss_pred ceEEEEcCCCCEEEECC-CCCCCcccceEEEECCEEEEEcCcCCCC----ccceEEEEECCCCeEEECCCCCCc------
Confidence 46999999999999984 4555555567788999999999976431 123788899989999999888762
Q ss_pred cccCCCcEEEEeeCCEEEEEEcC--------------CCeEEEEECCCCceEEc
Q 045071 363 EIEAGNGFDTIGHGEFIVIVIRG--------------SDKALLFDLCMKSWQWI 402 (453)
Q Consensus 363 ~~~~~~~~~~~~~g~~I~l~~~~--------------~~~v~~Yd~~~~~W~~l 402 (453)
+....++..++.||+.+.. ...+.+||+++++|+.+
T Consensus 244 ----r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 244 ----RSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ----CBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ----ccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 1233455678899987542 35799999999999998
No 6
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.88 E-value=3.7e-21 Score=183.25 Aligned_cols=244 Identities=13% Similarity=0.150 Sum_probs=181.6
Q ss_pred cceeeeCCCCCeEeccCCCCCCCCeeeeecCceEEEEecCC---CCeeEEEEcCcccc---eecCCCCCCCCCcceEEEE
Q 045071 138 EGYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDHA---GAKTLILCNPVTGS---LSQLPPTLRPRLFPSIGLK 211 (453)
Q Consensus 138 ~~~~fdp~~~~w~~l~l~~lp~~~~~~~s~~Gll~~~~~~~---~~~~~~v~NP~T~~---w~~LP~~~~~r~~~~~~~~ 211 (453)
....||+.+++|..++....++..+.++..+|.|++.++.. ....++++||.+++ |..+++++.+|..+.+...
T Consensus 32 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~ 111 (301)
T 2vpj_A 32 VVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL 111 (301)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE
T ss_pred EEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE
Confidence 45789999999999873333554555566678787776532 23479999999999 9999999988877654443
Q ss_pred EcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC-----CCEEE
Q 045071 212 VTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS-----PFSVL 286 (453)
Q Consensus 212 ~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~ 286 (453)
+ .+|+++|+..... ....+++||..+ ++|+.++++|.. .....+++++|+||++++. ...+.
T Consensus 112 -~---~~lyv~GG~~~~~---~~~~~~~~d~~~----~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 178 (301)
T 2vpj_A 112 -G---DMIYVSGGFDGSR---RHTSMERYDPNI----DQWSMLGDMQTA--REGAGLVVASGVIYCLGGYDGLNILNSVE 178 (301)
T ss_dssp -T---TEEEEECCBCSSC---BCCEEEEEETTT----TEEEEEEECSSC--CBSCEEEEETTEEEEECCBCSSCBCCCEE
T ss_pred -C---CEEEEEcccCCCc---ccceEEEEcCCC----CeEEECCCCCCC--cccceEEEECCEEEEECCCCCCcccceEE
Confidence 3 3899998854221 245679999999 999999888753 2335578889999999753 25799
Q ss_pred EEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccC
Q 045071 287 AYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEA 366 (453)
Q Consensus 287 ~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~ 366 (453)
+||+.+++|+.+ .++|..+..+.++..+++||++|+..... ..-.+|.+|..+++|+++..||..
T Consensus 179 ~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~i~v~GG~~~~~----~~~~v~~yd~~~~~W~~~~~~p~~---------- 243 (301)
T 2vpj_A 179 KYDPHTGHWTNV-TPMATKRSGAGVALLNDHIYVVGGFDGTA----HLSSVEAYNIRTDSWTTVTSMTTP---------- 243 (301)
T ss_dssp EEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEECCBCSSS----BCCCEEEEETTTTEEEEECCCSSC----------
T ss_pred EEeCCCCcEEeC-CCCCcccccceEEEECCEEEEEeCCCCCc----ccceEEEEeCCCCcEEECCCCCCc----------
Confidence 999999999998 34555555667788999999999865432 122678889889999999888752
Q ss_pred CCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCceEEcCCCCCcC
Q 045071 367 GNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKSWQWIPRCPYVQ 409 (453)
Q Consensus 367 ~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~W~~l~~~p~~~ 409 (453)
+....++..++.||+.+.. ...+.+||+++++|+.++.+|..+
T Consensus 244 r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r 291 (301)
T 2vpj_A 244 RCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSMGTQR 291 (301)
T ss_dssp CBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred ccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCCCccc
Confidence 1233455668999998642 257899999999999998887654
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.82 E-value=1.1e-18 Score=166.63 Aligned_cols=218 Identities=13% Similarity=0.157 Sum_probs=161.0
Q ss_pred CceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCC
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGF 247 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~ 247 (453)
.+.|++.++......++++||.+++|..+++++.+|..+.+.. .+ -+||++|+.. . .....+++||..+
T Consensus 11 ~~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~---~~lyv~GG~~-~---~~~~~~~~~d~~~--- 79 (306)
T 3ii7_A 11 HDYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-WD---NVVYILGGSQ-L---FPIKRMDCYNVVK--- 79 (306)
T ss_dssp CCEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE-ET---TEEEEECCBS-S---SBCCEEEEEETTT---
T ss_pred cceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE-EC---CEEEEEeCCC-C---CCcceEEEEeCCC---
Confidence 4666666654445689999999999999999998887765544 33 2799998864 1 1345679999999
Q ss_pred CCcccccCCCCCcccCCCCCeEEECCEEEEEecCC------CEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEE
Q 045071 248 FSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSP------FSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILV 321 (453)
Q Consensus 248 ~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~------~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv 321 (453)
++|+.+.++|.. .....++.++|+||++++.. ..+.+||+.+++|+.+ .++|..+..+.++..+++||++
T Consensus 80 -~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv~ 155 (306)
T 3ii7_A 80 -DSWYSKLGPPTP--RDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK-PSMLTQRCSHGMVEANGLIYVC 155 (306)
T ss_dssp -TEEEEEECCSSC--CBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEEE
T ss_pred -CeEEECCCCCcc--ccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC-CCCcCCcceeEEEEECCEEEEE
Confidence 999999888753 23355778899999997532 4699999999999988 4455555566778899999999
Q ss_pred EEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEEEEECCC
Q 045071 322 AAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKALLFDLCM 396 (453)
Q Consensus 322 ~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~ 396 (453)
|+...........-.+|.+|..+++|+++..||.. +....++..++.||+.+.. ...+.+||+++
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----------r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA----------RKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC----------CBSCEEEEETTEEEEECCEETTEEBCCEEEEETTT
T ss_pred CCCCCCCCcccccceEEEeCCCCCeEEECCCccch----------hhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCC
Confidence 98754321000022678889989999999888752 1233445568999997542 36799999999
Q ss_pred CceEEcCCCCCcCC
Q 045071 397 KSWQWIPRCPYVQA 410 (453)
Q Consensus 397 ~~W~~l~~~p~~~~ 410 (453)
++|+.++.+|..+.
T Consensus 226 ~~W~~~~~~p~~r~ 239 (306)
T 3ii7_A 226 NEWKMVSPMPWKGV 239 (306)
T ss_dssp TEEEECCCCSCCBS
T ss_pred CcEEECCCCCCCcc
Confidence 99999988886543
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.80 E-value=1.1e-17 Score=159.32 Aligned_cols=217 Identities=17% Similarity=0.166 Sum_probs=158.5
Q ss_pred CceEEEEecCC--CCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 168 GGLVCWVSDHA--GAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 168 ~Gll~~~~~~~--~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
++.|++.++.. ....+.++||.+++|..+++++.+|..+.+... + .+||++|+..... ....+++||..+
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~---~~lyv~GG~~~~~---~~~~~~~~d~~~- 86 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-A---GLVFAVGGFNGSL---RVRTVDSYDPVK- 86 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-T---TEEEEESCBCSSS---BCCCEEEEETTT-
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-C---CEEEEEeCcCCCc---cccceEEECCCC-
Confidence 44555555422 234689999999999999999988876654333 3 3899998853221 235679999999
Q ss_pred CCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCC-----CEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEE
Q 045071 246 GFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSP-----FSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLIL 320 (453)
Q Consensus 246 ~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~-----~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~v 320 (453)
++|+.++++|..+ ....++.++|++|++++.. ..+..||+.+++|+.+ .++|..+..+.++..+++||+
T Consensus 87 ---~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~~~~iyv 160 (302)
T 2xn4_A 87 ---DQWTSVANMRDRR--STLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV-APMNTRRSSVGVGVVGGLLYA 160 (302)
T ss_dssp ---TEEEEECCCSSCC--BSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-CCCSSCCBSCEEEEETTEEEE
T ss_pred ---CceeeCCCCCccc--cceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeec-CCCCCcccCceEEEECCEEEE
Confidence 9999999887632 2355788899999997532 4689999999999998 345555556677789999999
Q ss_pred EEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEEEEECC
Q 045071 321 VAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKALLFDLC 395 (453)
Q Consensus 321 v~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~ 395 (453)
+|+...... ...-.+|.+|..+++|+++..||.. +....++..++.||+.+.. ...+.+||++
T Consensus 161 ~GG~~~~~~--~~~~~~~~yd~~~~~W~~~~~~p~~----------r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 161 VGGYDVASR--QCLSTVECYNATTNEWTYIAEMSTR----------RSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp ECCEETTTT--EECCCEEEEETTTTEEEEECCCSSC----------CBSCEEEEETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred EeCCCCCCC--ccccEEEEEeCCCCcEEECCCCccc----------cccccEEEECCEEEEECCCCCCcccceEEEEeCC
Confidence 998754310 0012578889889999999888752 1233455668999998642 4679999999
Q ss_pred CCceEEcCCCCCcCC
Q 045071 396 MKSWQWIPRCPYVQA 410 (453)
Q Consensus 396 ~~~W~~l~~~p~~~~ 410 (453)
+++|+.++.+|..+.
T Consensus 229 ~~~W~~~~~~~~~r~ 243 (302)
T 2xn4_A 229 TNAWRQVADMNMCRR 243 (302)
T ss_dssp TTEEEEECCCSSCCB
T ss_pred CCCEeeCCCCCCccc
Confidence 999999988876543
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.80 E-value=8.5e-18 Score=159.91 Aligned_cols=216 Identities=13% Similarity=0.139 Sum_probs=158.8
Q ss_pred cCceEEEEec-CC---CCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEc
Q 045071 167 SGGLVCWVSD-HA---GAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHI 242 (453)
Q Consensus 167 ~~Gll~~~~~-~~---~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds 242 (453)
.++.|++.++ .. ....++++||.+++|..+++++.+|..+.+.. .+ .+|+++|+..... ....+++||.
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~---~~l~v~GG~~~~~---~~~~~~~~d~ 85 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS-LH---DRIYVIGGYDGRS---RLSSVECLDY 85 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ET---TEEEEECCBCSSC---BCCCEEEEET
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE-EC---CEEEEEcCCCCCc---cCceEEEEEC
Confidence 4566666555 22 23478999999999999999988887655433 33 3899998853221 2356799999
Q ss_pred ccCCCCCc---ccccCCCCCcccCCCCCeEEECCEEEEEecC-----CCEEEEEECCCCcEEEeecCCccccCCCceeee
Q 045071 243 DAGGFFSL---WGTTSSLPRLCSLESGRMVQVNGKFYCMNYS-----PFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS 314 (453)
Q Consensus 243 ~~~~~~~~---W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~ 314 (453)
.+ ++ |+.+.++|.. .....++.++|++|++++. ...+..||+.+++|+.+. ++|..+..+.++..
T Consensus 86 ~~----~~~~~W~~~~~~p~~--r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 86 TA----DEDGVWYSVAPMNVR--RGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-DMQTAREGAGLVVA 158 (301)
T ss_dssp TC----CTTCCCEEECCCSSC--CBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE-ECSSCCBSCEEEEE
T ss_pred CC----CCCCeeEECCCCCCC--ccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECC-CCCCCcccceEEEE
Confidence 99 88 9999888753 2335578889999999753 257999999999999984 44444555677788
Q ss_pred CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeE
Q 045071 315 NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKA 389 (453)
Q Consensus 315 ~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v 389 (453)
+++||++|+..... ..-.+|.+|..+++|+++..||.. +....++..++.||+.+.. ...+
T Consensus 159 ~~~iyv~GG~~~~~----~~~~~~~~d~~~~~W~~~~~~p~~----------r~~~~~~~~~~~i~v~GG~~~~~~~~~v 224 (301)
T 2vpj_A 159 SGVIYCLGGYDGLN----ILNSVEKYDPHTGHWTNVTPMATK----------RSGAGVALLNDHIYVVGGFDGTAHLSSV 224 (301)
T ss_dssp TTEEEEECCBCSSC----BCCCEEEEETTTTEEEEECCCSSC----------CBSCEEEEETTEEEEECCBCSSSBCCCE
T ss_pred CCEEEEECCCCCCc----ccceEEEEeCCCCcEEeCCCCCcc----------cccceEEEECCEEEEEeCCCCCcccceE
Confidence 99999999865431 122678889889999999888752 1233455668999998643 4679
Q ss_pred EEEECCCCceEEcCCCCCcCC
Q 045071 390 LLFDLCMKSWQWIPRCPYVQA 410 (453)
Q Consensus 390 ~~Yd~~~~~W~~l~~~p~~~~ 410 (453)
.+||+++++|+.++.+|..+.
T Consensus 225 ~~yd~~~~~W~~~~~~p~~r~ 245 (301)
T 2vpj_A 225 EAYNIRTDSWTTVTSMTTPRC 245 (301)
T ss_dssp EEEETTTTEEEEECCCSSCCB
T ss_pred EEEeCCCCcEEECCCCCCccc
Confidence 999999999999988876543
No 10
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.80 E-value=4.9e-18 Score=162.34 Aligned_cols=222 Identities=14% Similarity=0.122 Sum_probs=160.1
Q ss_pred eeecCceEEEEecC--CCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCC-cccccccceeEE
Q 045071 164 ASSSGGLVCWVSDH--AGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLIS-PYAVKNLSSESF 240 (453)
Q Consensus 164 ~~s~~Gll~~~~~~--~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~-~~~~~~~~~evy 240 (453)
....++.|++.++. .....++++||.+++|..+++++.+|..+.+... + .+||++|+.... ........+++|
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~---~~lyv~GG~~~~~~~~~~~~~~~~~ 95 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-G---GLLYAVGGRNNSPDGNTDSSALDCY 95 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-T---TEEEEECCEEEETTEEEECCCEEEE
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-C---CEEEEECCCcCCCCCCeecceEEEE
Confidence 34455666665552 2235789999999999999999988877654333 3 389999885210 011123567999
Q ss_pred EcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC-----CCEEEEEECCCCcEEEeecCCccccCCCceeeeC
Q 045071 241 HIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS-----PFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSN 315 (453)
Q Consensus 241 ds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~ 315 (453)
|..+ ++|+.+.++|.. .....++.++|++|++++. ...+..||+.+++|+.+. ++|..+....++..+
T Consensus 96 d~~~----~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 96 NPMT----NQWSPCAPMSVP--RNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-PMLTRRIGVGVAVLN 168 (308)
T ss_dssp ETTT----TEEEECCCCSSC--CBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECC-CCSSCCBSCEEEEET
T ss_pred CCCC----CeEeECCCCCcC--ccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECC-CCCccccceEEEEEC
Confidence 9999 999999888763 2335578889999999652 246999999999999873 455545566777889
Q ss_pred CeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEE
Q 045071 316 GKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKAL 390 (453)
Q Consensus 316 g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~ 390 (453)
++||++|+..... ..-.+|.+|..+++|+++..||.. +....++..++.||+.+.. ...+.
T Consensus 169 ~~iyv~GG~~~~~----~~~~~~~yd~~~~~W~~~~~~p~~----------r~~~~~~~~~~~iyv~GG~~~~~~~~~v~ 234 (308)
T 1zgk_A 169 RLLYAVGGFDGTN----RLNSAECYYPERNEWRMITAMNTI----------RSGAGVCVLHNCIYAAGGYDGQDQLNSVE 234 (308)
T ss_dssp TEEEEECCBCSSC----BCCCEEEEETTTTEEEECCCCSSC----------CBSCEEEEETTEEEEECCBCSSSBCCCEE
T ss_pred CEEEEEeCCCCCC----cCceEEEEeCCCCeEeeCCCCCCc----------cccceEEEECCEEEEEeCCCCCCccceEE
Confidence 9999999865432 122678889889999999888752 1233445568999998642 46899
Q ss_pred EEECCCCceEEcCCCCCcCC
Q 045071 391 LFDLCMKSWQWIPRCPYVQA 410 (453)
Q Consensus 391 ~Yd~~~~~W~~l~~~p~~~~ 410 (453)
+||+++++|+.++.+|..+.
T Consensus 235 ~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 235 RYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp EEETTTTEEEECCCCSSCCB
T ss_pred EEeCCCCcEEECCCCCCCcc
Confidence 99999999999988876543
No 11
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.79 E-value=7.2e-18 Score=164.49 Aligned_cols=250 Identities=14% Similarity=0.062 Sum_probs=166.1
Q ss_pred cceeeeCC--CCCeEecc-CCCCCCCCeeeeecCceEEEEecC-C-------CCeeEEEEcCcccceecCCCCC-CCCCc
Q 045071 138 EGYLFDPH--ELSWYRIS-FALVPSEFSPASSSGGLVCWVSDH-A-------GAKTLILCNPVTGSLSQLPPTL-RPRLF 205 (453)
Q Consensus 138 ~~~~fdp~--~~~w~~l~-l~~lp~~~~~~~s~~Gll~~~~~~-~-------~~~~~~v~NP~T~~w~~LP~~~-~~r~~ 205 (453)
..+.||+. +++|..++ +|..|+..+.++..+|.|++.++. . ....+++|||.+++|..+++++ .+|..
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~ 111 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG 111 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSS
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccccc
Confidence 35689997 48999987 443566656666778888887764 1 1346899999999999999988 66665
Q ss_pred ceEEEEEcCCceEEEEEccCCCCccc-------------------------------ccccceeEEEcccCCCCCccccc
Q 045071 206 PSIGLKVTPTAVDVTVAGDDLISPYA-------------------------------VKNLSSESFHIDAGGFFSLWGTT 254 (453)
Q Consensus 206 ~~~~~~~~~~~ykvv~~g~~~~~~~~-------------------------------~~~~~~evyds~~~~~~~~W~~~ 254 (453)
+.+.. .+ .+||++|+....... .....+++||..+ ++|+.+
T Consensus 112 ~~~~~-~~---~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~----~~W~~~ 183 (357)
T 2uvk_A 112 HVTFV-HN---GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPST----QQWSYA 183 (357)
T ss_dssp EEEEE-ET---TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTT----TEEEEE
T ss_pred ceEEE-EC---CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCC----CcEEEC
Confidence 54333 33 389999885321100 0125689999999 999999
Q ss_pred CCCCCcccCCCCCeEEECCEEEEEecC------CCEEEEEEC--CCCcEEEeec-CCccccCCCceeeeCCeEEEEEEEe
Q 045071 255 SSLPRLCSLESGRMVQVNGKFYCMNYS------PFSVLAYDI--SANAWFNIQA-PMRRFLRSPSLLDSNGKLILVAAVE 325 (453)
Q Consensus 255 ~~~p~~~~~~~~~~v~~~G~lY~~~~~------~~~i~~yD~--~~~~W~~i~~-p~~~~~~~~~lv~~~g~L~vv~~~~ 325 (453)
.++|.... ....+++++++||++++. ...+..||+ .+++|+.+.. |.+.....+.++..+++||++|+..
T Consensus 184 ~~~p~~~~-~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~ 262 (357)
T 2uvk_A 184 GESPWYGT-AGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAG 262 (357)
T ss_dssp EECSSCCC-BSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEE
T ss_pred CCCCCCCc-ccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCcc
Confidence 88874222 124578889999999652 246888987 8999998732 3333333445788999999999865
Q ss_pred ccC------------C-CCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC------C
Q 045071 326 KSK------------L-NVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG------S 386 (453)
Q Consensus 326 ~~~------------~-~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~------~ 386 (453)
... . .......+|.+|..+++|+++..||... ....++..++.||+.+.. .
T Consensus 263 ~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----------~~~~~~~~~~~i~v~GG~~~~~~~~ 332 (357)
T 2uvk_A 263 FKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGR----------AYGVSLPWNNSLLIIGGETAGGKAV 332 (357)
T ss_dssp CTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCC----------BSSEEEEETTEEEEEEEECGGGCEE
T ss_pred ccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCc----------ccceeEEeCCEEEEEeeeCCCCCEe
Confidence 321 0 0011235788888899999999988521 223445578999998652 2
Q ss_pred CeEEEEECCCCceEEcCCCC
Q 045071 387 DKALLFDLCMKSWQWIPRCP 406 (453)
Q Consensus 387 ~~v~~Yd~~~~~W~~l~~~p 406 (453)
..+.+|++++++|.++...|
T Consensus 333 ~~v~~l~~~~~~~~~~~~~~ 352 (357)
T 2uvk_A 333 TDSVLITVKDNKVTVQNLEH 352 (357)
T ss_dssp EEEEEEEC-CCSCEEEC---
T ss_pred eeEEEEEEcCcEeEeeeccc
Confidence 57889999999998876544
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.78 E-value=1.2e-17 Score=163.03 Aligned_cols=229 Identities=11% Similarity=0.052 Sum_probs=155.0
Q ss_pred CCCeeeeecCceEEEEecCCCCeeEEEEcCc--ccceecCCCCC-CCCCcceEEEEEcCCceEEEEEccCCC--Cccccc
Q 045071 159 SEFSPASSSGGLVCWVSDHAGAKTLILCNPV--TGSLSQLPPTL-RPRLFPSIGLKVTPTAVDVTVAGDDLI--SPYAVK 233 (453)
Q Consensus 159 ~~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~--T~~w~~LP~~~-~~r~~~~~~~~~~~~~ykvv~~g~~~~--~~~~~~ 233 (453)
+.....+..++.|++.++.. ...++++|+. +++|..+++++ .+|..+.+++. + .+||++|+... ......
T Consensus 10 r~~~~~~~~~~~iyv~GG~~-~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~-~---~~lyv~GG~~~~~~~~~~~ 84 (357)
T 2uvk_A 10 FKSGTGAIDNDTVYIGLGSA-GTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI-D---GNLYVFGGIGKNSEGLTQV 84 (357)
T ss_dssp CCSCEEEEETTEEEEECGGG-TTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE-T---TEEEEECCEEECTTSCEEE
T ss_pred ccceEEEEECCEEEEEeCcC-CCeEEEEccccCCCCeeECCCCCCCcCccceEEEE-C---CEEEEEcCCCCCCCcccee
Confidence 33444555588888887644 2479999998 59999999999 78877654433 3 38999988511 111123
Q ss_pred ccceeEEEcccCCCCCcccccCCCC-CcccCCCCCeEEECCEEEEEecC-------------------------------
Q 045071 234 NLSSESFHIDAGGFFSLWGTTSSLP-RLCSLESGRMVQVNGKFYCMNYS------------------------------- 281 (453)
Q Consensus 234 ~~~~evyds~~~~~~~~W~~~~~~p-~~~~~~~~~~v~~~G~lY~~~~~------------------------------- 281 (453)
...+++||+.+ ++|+.+.+++ . ......++.++|+||++++.
T Consensus 85 ~~~v~~yd~~~----~~W~~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (357)
T 2uvk_A 85 FNDVHKYNPKT----NSWVKLMSHAPM--GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFD 158 (357)
T ss_dssp CCCEEEEETTT----TEEEECSCCCSS--CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHS
T ss_pred eccEEEEeCCC----CcEEECCCCCCc--ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhcc
Confidence 45789999999 9999998876 3 23334467799999999763
Q ss_pred --------CCEEEEEECCCCcEEEeecCCccccCC-CceeeeCCeEEEEEEEeccCCCCCCcEEEEEee--cCCCCeEEE
Q 045071 282 --------PFSVLAYDISANAWFNIQAPMRRFLRS-PSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQ--ACGTLWAEI 350 (453)
Q Consensus 282 --------~~~i~~yD~~~~~W~~i~~p~~~~~~~-~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld--~~~~~W~~v 350 (453)
...+.+||+.+++|+.+. ++|..... +.++..+++||++|+..... ...-++|.++ +.+++|+++
T Consensus 159 ~~~~~~~~~~~v~~yd~~~~~W~~~~-~~p~~~~~~~~~~~~~~~iyv~GG~~~~~---~~~~~v~~~d~d~~~~~W~~~ 234 (357)
T 2uvk_A 159 KKAEDYFFNKFLLSFDPSTQQWSYAG-ESPWYGTAGAAVVNKGDKTWLINGEAKPG---LRTDAVFELDFTGNNLKWNKL 234 (357)
T ss_dssp SCGGGGCCCCEEEEEETTTTEEEEEE-ECSSCCCBSCEEEEETTEEEEECCEEETT---EECCCEEEEECC---CEEEEC
T ss_pred ccccccCCcccEEEEeCCCCcEEECC-CCCCCCcccccEEEECCEEEEEeeecCCC---cccCceEEEEecCCCCcEEec
Confidence 158999999999999983 44433333 57788999999999865431 1122455555 478999999
Q ss_pred eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCC----------------------CeEEEEECCCCceEEcCCCCCc
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGS----------------------DKALLFDLCMKSWQWIPRCPYV 408 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~----------------------~~v~~Yd~~~~~W~~l~~~p~~ 408 (453)
..||... ......++..++.||+.+... ..+.+||+++++|+.++.+|..
T Consensus 235 ~~~~~~~--------~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 306 (357)
T 2uvk_A 235 APVSSPD--------GVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQG 306 (357)
T ss_dssp CCSSTTT--------CCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSC
T ss_pred CCCCCCc--------ccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCC
Confidence 8886421 112233566789999986420 3688999999999999888865
Q ss_pred CC
Q 045071 409 QA 410 (453)
Q Consensus 409 ~~ 410 (453)
+.
T Consensus 307 r~ 308 (357)
T 2uvk_A 307 RA 308 (357)
T ss_dssp CB
T ss_pred cc
Confidence 44
No 13
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.77 E-value=2e-17 Score=158.48 Aligned_cols=203 Identities=12% Similarity=0.070 Sum_probs=148.4
Q ss_pred ceeeeCCCCCeEeccCCCCCCCCeeeeecCceEEEEecC------CCCeeEEEEcCcccceecCCCCCCCCCcceEEEEE
Q 045071 139 GYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDH------AGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKV 212 (453)
Q Consensus 139 ~~~fdp~~~~w~~l~l~~lp~~~~~~~s~~Gll~~~~~~------~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~ 212 (453)
...||+.+++|..++....|+..+.++..+|.|++.++. .....++++||.+++|..+++++.+|..+.+.. .
T Consensus 69 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~ 147 (315)
T 4asc_A 69 FLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-H 147 (315)
T ss_dssp EEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-E
T ss_pred eEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-E
Confidence 468999999999887433455455566678888887762 223579999999999999999998887765443 3
Q ss_pred cCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCC-----CEEEE
Q 045071 213 TPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSP-----FSVLA 287 (453)
Q Consensus 213 ~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~-----~~i~~ 287 (453)
+ .+|+++|+..... .....+++||+.+ ++|+.++++|.. .....++.++|+||++++.. ..+.+
T Consensus 148 ~---~~iyv~GG~~~~~--~~~~~~~~yd~~~----~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 216 (315)
T 4asc_A 148 M---DLVYVIGGKGSDR--KCLNKMCVYDPKK----FEWKELAPMQTA--RSLFGATVHDGRIIVAAGVTDTGLTSSAEV 216 (315)
T ss_dssp T---TEEEEECCBCTTS--CBCCCEEEEETTT----TEEEECCCCSSC--CBSCEEEEETTEEEEEEEECSSSEEEEEEE
T ss_pred C---CEEEEEeCCCCCC--cccceEEEEeCCC----CeEEECCCCCCc--hhceEEEEECCEEEEEeccCCCCccceEEE
Confidence 3 2899998852111 1345789999999 999999988753 23355788999999997532 37899
Q ss_pred EECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCC--CC---CCcEEEEEeecCCCCeEEEeecC
Q 045071 288 YDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKL--NV---PKSLRLWSLQACGTLWAEIERMP 354 (453)
Q Consensus 288 yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~--~~---~~~i~vw~ld~~~~~W~~v~~mp 354 (453)
||+.+++|+.+. ++|..+..+.++..+|+||++|+...... .. ...-.+|.+|..+++|+++...|
T Consensus 217 yd~~~~~W~~~~-~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~ 287 (315)
T 4asc_A 217 YSITDNKWAPFE-AFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVLREI 287 (315)
T ss_dssp EETTTTEEEEEC-CCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEESCS
T ss_pred EECCCCeEEECC-CCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhccCC
Confidence 999999999984 45555556677889999999999753100 00 11237899999999999984443
No 14
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.73 E-value=6e-17 Score=155.42 Aligned_cols=199 Identities=12% Similarity=0.108 Sum_probs=144.6
Q ss_pred ceeeeCCCCCeEeccCCCCCCCCeeeeecCceEEEEecCC-----CCeeEEEEcCcccceecCCCCCCCCCcceEEEEEc
Q 045071 139 GYLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDHA-----GAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVT 213 (453)
Q Consensus 139 ~~~fdp~~~~w~~l~l~~lp~~~~~~~s~~Gll~~~~~~~-----~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~ 213 (453)
...||+.+++|..++....++..+.++..+|.|++.++.. ....++++||.+++|..+++++.+|..+.+.. .+
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 158 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HN 158 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ET
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-EC
Confidence 4679999999999874334555555666688888776532 13468999999999999999998887655433 33
Q ss_pred CCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC-----CCEEEEE
Q 045071 214 PTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS-----PFSVLAY 288 (453)
Q Consensus 214 ~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~~y 288 (453)
.+||++|+..... .....+++||..+ ++|+.++++|..+ ....++.++|+||++++. ...+.+|
T Consensus 159 ---~~iyv~GG~~~~~--~~~~~~~~yd~~~----~~W~~~~~~p~~r--~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 227 (318)
T 2woz_A 159 ---GMIYCLGGKTDDK--KCTNRVFIYNPKK----GDWKDLAPMKTPR--SMFGVAIHKGKIVIAGGVTEDGLSASVEAF 227 (318)
T ss_dssp ---TEEEEECCEESSS--CBCCCEEEEETTT----TEEEEECCCSSCC--BSCEEEEETTEEEEEEEEETTEEEEEEEEE
T ss_pred ---CEEEEEcCCCCCC--CccceEEEEcCCC----CEEEECCCCCCCc--ccceEEEECCEEEEEcCcCCCCccceEEEE
Confidence 3899998742111 1245679999999 9999998887532 335578899999999752 2468999
Q ss_pred ECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccC-----CCCCCcEEEEEeecCCCCeEEE
Q 045071 289 DISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSK-----LNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 289 D~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~-----~~~~~~i~vw~ld~~~~~W~~v 350 (453)
|+++++|+.+. ++|..+..+.++..+|+||++|+..... +.....-.+|.+|..+++|+++
T Consensus 228 d~~~~~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~ 293 (318)
T 2woz_A 228 DLKTNKWEVMT-EFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM 293 (318)
T ss_dssp ETTTCCEEECC-CCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE
T ss_pred ECCCCeEEECC-CCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh
Confidence 99999999883 4554455567788999999999864311 0001123789999999999998
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.64 E-value=1.4e-14 Score=153.37 Aligned_cols=222 Identities=10% Similarity=0.066 Sum_probs=151.4
Q ss_pred CCeeeeecCceEEEEecCC--CCeeEEEEcCcccceecCC-C-----CCCCCCcceEEEEE-cCCceEEEEEccCCCCcc
Q 045071 160 EFSPASSSGGLVCWVSDHA--GAKTLILCNPVTGSLSQLP-P-----TLRPRLFPSIGLKV-TPTAVDVTVAGDDLISPY 230 (453)
Q Consensus 160 ~~~~~~s~~Gll~~~~~~~--~~~~~~v~NP~T~~w~~LP-~-----~~~~r~~~~~~~~~-~~~~ykvv~~g~~~~~~~ 230 (453)
.+..+++.++.|++.|+.. ....++++||.+++|..++ + ++.+|..+.++... + .+||++||......
T Consensus 389 r~g~~~~~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~---~~lyv~GG~~~~~~ 465 (695)
T 2zwa_A 389 KFGDVDVAGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRN---NQLLLIGGRKAPHQ 465 (695)
T ss_dssp BSCEEEECSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTT---TEEEEECCBSSTTC
T ss_pred ceeEEEEECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccC---CEEEEEcCCCCCCC
Confidence 3444444677788777642 2347899999999999998 5 56677766544331 3 37999998643211
Q ss_pred cccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE-CCEEEEEecCC--CEEEEEECCCCcEEEeec--CCccc
Q 045071 231 AVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV-NGKFYCMNYSP--FSVLAYDISANAWFNIQA--PMRRF 305 (453)
Q Consensus 231 ~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~-~G~lY~~~~~~--~~i~~yD~~~~~W~~i~~--p~~~~ 305 (453)
....+++||..+ ++|+.++++|..+ ..+.++.+ +|+||++++.. ..+.+||+.+++|+.+.. ++|..
T Consensus 466 --~~~dv~~yd~~t----~~W~~~~~~p~~R--~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 466 --GLSDNWIFDMKT----REWSMIKSLSHTR--FRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp --BCCCCEEEETTT----TEEEECCCCSBCC--BSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGS
T ss_pred --ccccEEEEeCCC----CcEEECCCCCCCc--ccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCc
Confidence 235689999999 9999999888632 33456665 99999997642 169999999999998853 13433
Q ss_pred cCCCceeeeC---CeEEEEEEEeccCCCCCCcEEEEEeecCCCC------eEEEeecCHHHHHHhhcccCCCcEEEEeeC
Q 045071 306 LRSPSLLDSN---GKLILVAAVEKSKLNVPKSLRLWSLQACGTL------WAEIERMPQQLYAQFAEIEAGNGFDTIGHG 376 (453)
Q Consensus 306 ~~~~~lv~~~---g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~------W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g 376 (453)
+..+..+.++ |+||++||...... ...-.+|.+|..++. |+++..+|. ..+....++..+
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~--~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~---------~~R~~~~~~~~~ 606 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQT--TVSDKAIIFKYDAENATEPITVIKKLQHPL---------FQRYGSQIKYIT 606 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSS--CBCCEEEEEEECTTCSSCCEEEEEEEECGG---------GCCBSCEEEEEE
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCC--eeeCcEEEEEccCCccccceEEEEcCCCCC---------CCcccceEEEeC
Confidence 4444444545 89999998643210 112268888888888 899888652 011233444556
Q ss_pred -CEEEEEEcC--------CCeEEEEECCCCceEEcC
Q 045071 377 -EFIVIVIRG--------SDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 377 -~~I~l~~~~--------~~~v~~Yd~~~~~W~~l~ 403 (453)
+.||+.++. ...+.+||+++++|+.++
T Consensus 607 ~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~ 642 (695)
T 2zwa_A 607 PRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP 642 (695)
T ss_dssp TTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC
T ss_pred CCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee
Confidence 899998652 467999999999999653
No 16
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.64 E-value=9e-15 Score=154.26 Aligned_cols=247 Identities=11% Similarity=0.061 Sum_probs=162.0
Q ss_pred cceeeeCCCCCeEecc-CCCCCCCCeeeee-cCceEEEEecCCC---------CeeEEEEcCcccceecCCCCCCCCCcc
Q 045071 138 EGYLFDPHELSWYRIS-FALVPSEFSPASS-SGGLVCWVSDHAG---------AKTLILCNPVTGSLSQLPPTLRPRLFP 206 (453)
Q Consensus 138 ~~~~fdp~~~~w~~l~-l~~lp~~~~~~~s-~~Gll~~~~~~~~---------~~~~~v~NP~T~~w~~LP~~~~~r~~~ 206 (453)
.+..|||..++|..+. +|.. ....... .+|.|++.++... ...+.+|||.|++|..++.++.+|...
T Consensus 167 ~~~~~dp~~~~W~~~~~~P~~--~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~ 244 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTIDLPIV--PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMF 244 (656)
T ss_dssp CCCCCCTTSCEEEEEEECSSC--CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCS
T ss_pred ccccCCCCCCeeeeeccCCCC--ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCc
Confidence 3568999999999765 4432 2332223 2788887764321 236889999999999999887766544
Q ss_pred eEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE-CCEEEEEecC----
Q 045071 207 SIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV-NGKFYCMNYS---- 281 (453)
Q Consensus 207 ~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~-~G~lY~~~~~---- 281 (453)
..+.++.. ..+||++|+... ..+++||+.+ +.|+.+.+|+..+. ...++++ +|+||++++.
T Consensus 245 ~~~~~~~~-~g~lyv~GG~~~-------~~v~~yd~~t----~~W~~~~~~~~~R~--~~s~~~~~dg~iyv~GG~~~~~ 310 (656)
T 1k3i_A 245 CPGISMDG-NGQIVVTGGNDA-------KKTSLYDSSS----DSWIPGPDMQVARG--YQSSATMSDGRVFTIGGSWSGG 310 (656)
T ss_dssp SCEEEECT-TSCEEEECSSST-------TCEEEEEGGG----TEEEECCCCSSCCS--SCEEEECTTSCEEEECCCCCSS
T ss_pred cccccCCC-CCCEEEeCCCCC-------CceEEecCcC----CceeECCCCCcccc--ccceEEecCCeEEEEeCcccCC
Confidence 32333211 137999988532 2579999999 99999988876332 2445777 9999999872
Q ss_pred --CCEEEEEECCCCcEEEee----cCCcccc-------------------------------------------------
Q 045071 282 --PFSVLAYDISANAWFNIQ----APMRRFL------------------------------------------------- 306 (453)
Q Consensus 282 --~~~i~~yD~~~~~W~~i~----~p~~~~~------------------------------------------------- 306 (453)
...+.+||+.+++|+.++ .|++...
T Consensus 311 ~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~ 390 (656)
T 1k3i_A 311 VFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQS 390 (656)
T ss_dssp SCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEE
T ss_pred cccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccc
Confidence 257899999999999873 2322110
Q ss_pred --------CCCcee---eeCCeEEEEEEEeccC-CCCC-CcEEEEEeecCCCCeEEEe--ecCHHHHHHhhcccCCCcEE
Q 045071 307 --------RSPSLL---DSNGKLILVAAVEKSK-LNVP-KSLRLWSLQACGTLWAEIE--RMPQQLYAQFAEIEAGNGFD 371 (453)
Q Consensus 307 --------~~~~lv---~~~g~L~vv~~~~~~~-~~~~-~~i~vw~ld~~~~~W~~v~--~mp~~~~~~~~~~~~~~~~~ 371 (453)
.....+ ..+|+||++|+..... .... ....|+.+|+.++.|.++. .||.. +....
T Consensus 391 ~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~----------R~~~~ 460 (656)
T 1k3i_A 391 NRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA----------RTFHT 460 (656)
T ss_dssp TTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC----------CBSCE
T ss_pred ccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC----------cccCC
Confidence 001111 2479999999853210 0011 1235777888889999986 77752 11223
Q ss_pred EEee-CCEEEEEEcC-----------CCeEEEEECCCCceEEcCCCCCcCC
Q 045071 372 TIGH-GEFIVIVIRG-----------SDKALLFDLCMKSWQWIPRCPYVQA 410 (453)
Q Consensus 372 ~~~~-g~~I~l~~~~-----------~~~v~~Yd~~~~~W~~l~~~p~~~~ 410 (453)
++.. ++.||+.+.. ...+.+||+++++|+.++.++..+.
T Consensus 461 ~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~ 511 (656)
T 1k3i_A 461 SVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRV 511 (656)
T ss_dssp EEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCC
T ss_pred eEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccc
Confidence 3333 7788887542 2578999999999999987776543
No 17
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.57 E-value=7.9e-14 Score=147.61 Aligned_cols=228 Identities=10% Similarity=0.033 Sum_probs=149.8
Q ss_pred cceeeeCCCCCeEeccCC------CCCCCCeeeeec--CceEEEEecCCC----CeeEEEEcCcccceecCCCCCCCCCc
Q 045071 138 EGYLFDPHELSWYRISFA------LVPSEFSPASSS--GGLVCWVSDHAG----AKTLILCNPVTGSLSQLPPTLRPRLF 205 (453)
Q Consensus 138 ~~~~fdp~~~~w~~l~l~------~lp~~~~~~~s~--~Gll~~~~~~~~----~~~~~v~NP~T~~w~~LP~~~~~r~~ 205 (453)
....||+.+++|..++.+ ..++..+.++.. +|.|++.|+... ...+++|||.+++|..+++++.+|..
T Consensus 413 ~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~ 492 (695)
T 2zwa_A 413 EILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR 492 (695)
T ss_dssp CEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS
T ss_pred cEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc
Confidence 457899999999988732 234444555555 888888776422 35789999999999999999998887
Q ss_pred ceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCC---CCCcccCCCCCeEEEC---CEEEEEe
Q 045071 206 PSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSS---LPRLCSLESGRMVQVN---GKFYCMN 279 (453)
Q Consensus 206 ~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~---~p~~~~~~~~~~v~~~---G~lY~~~ 279 (453)
+.+++..+ .+||++||..... .+++||..+ +.|+.+.. +|.. ...+.+++++ |++|+++
T Consensus 493 h~~~~~~~---~~iyv~GG~~~~~------~v~~yd~~t----~~W~~~~~~g~~p~~--r~~~~a~v~~~~~~~iyv~G 557 (695)
T 2zwa_A 493 HSACSLPD---GNVLILGGVTEGP------AMLLYNVTE----EIFKDVTPKDEFFQN--SLVSAGLEFDPVSKQGIILG 557 (695)
T ss_dssp CEEEECTT---SCEEEECCBCSSC------SEEEEETTT----TEEEECCCSSGGGGS--CCBSCEEEEETTTTEEEEEC
T ss_pred ceEEEEcC---CEEEEECCCCCCC------CEEEEECCC----CceEEccCCCCCCCc--ccceeEEEEeCCCCEEEEEC
Confidence 65444323 3899998853221 679999999 99999875 5432 2224446666 8999997
Q ss_pred cC-------CCEEEEEECCCCc------EEEeecCCccccCCCceeeeC-CeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 280 YS-------PFSVLAYDISANA------WFNIQAPMRRFLRSPSLLDSN-GKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 280 ~~-------~~~i~~yD~~~~~------W~~i~~p~~~~~~~~~lv~~~-g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
+. ...+.+||+.+++ |+.+...++..+..+.++..+ |+||++||...... ....-.||.||..++
T Consensus 558 G~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~-~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 558 GGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGL-FDRTNSIISLDPLSE 636 (695)
T ss_dssp CBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCC-CCTTTSEEEEETTTT
T ss_pred CcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCC-CCCCCeEEEEECCCC
Confidence 54 2579999999999 888744112334455667777 99999998643210 001226788888899
Q ss_pred CeEEEeecCHHHHHHhhcccCCCcEEEEeeCC-EEEEEEc
Q 045071 346 LWAEIERMPQQLYAQFAEIEAGNGFDTIGHGE-FIVIVIR 384 (453)
Q Consensus 346 ~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~-~I~l~~~ 384 (453)
+|+. ..+|......-.. ...+..++..++ .||+.++
T Consensus 637 ~W~~-~~~p~~~~~~~~p--~~~gh~~~~~~~g~i~v~GG 673 (695)
T 2zwa_A 637 TLTS-IPISRRIWEDHSL--MLAGFSLVSTSMGTIHIIGG 673 (695)
T ss_dssp EEEE-CCCCHHHHHHSCC--CCSSCEEECC---CEEEECC
T ss_pred eEEE-eeccccccCCCCc--cceeeeEEEeCCCEEEEEeC
Confidence 9984 4666543211101 112233344444 7777654
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.45 E-value=2.1e-12 Score=136.15 Aligned_cols=228 Identities=10% Similarity=0.025 Sum_probs=145.6
Q ss_pred ceeeeCCCCCeEeccCCCCCCC-Ce--eeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCC
Q 045071 139 GYLFDPHELSWYRISFALVPSE-FS--PASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPT 215 (453)
Q Consensus 139 ~~~fdp~~~~w~~l~l~~lp~~-~~--~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~ 215 (453)
...||+.+++|..++....++. ++ .+...+|.|++.++... ..+.+|||.+++|..+++|+.+|..+.+.+..+
T Consensus 221 ~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~-~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~d-- 297 (656)
T 1k3i_A 221 TSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA-KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSD-- 297 (656)
T ss_dssp EEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST-TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTT--
T ss_pred EEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC-CceEEecCcCCceeECCCCCccccccceEEecC--
Confidence 4689999999998763223333 32 23356888888887443 379999999999999999999988765443313
Q ss_pred ceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccC-----CCCCccc----------------------------
Q 045071 216 AVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTS-----SLPRLCS---------------------------- 262 (453)
Q Consensus 216 ~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~-----~~p~~~~---------------------------- 262 (453)
.|||++|+..... ......|+||+.+ ++|+.+. +++....
T Consensus 298 -g~iyv~GG~~~~~--~~~~~~e~yd~~t----~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 298 -GRVFTIGGSWSGG--VFEKNGEVYSPSS----KTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp -SCEEEECCCCCSS--SCCCCEEEEETTT----TEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSE
T ss_pred -CeEEEEeCcccCC--cccccceEeCCCC----CcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccc
Confidence 3899998832111 1245679999999 9999862 2321100
Q ss_pred ---------------------------CCCCCeEE---ECCEEEEEecCC--------C---EEEEEECCCCcEEEee-c
Q 045071 263 ---------------------------LESGRMVQ---VNGKFYCMNYSP--------F---SVLAYDISANAWFNIQ-A 300 (453)
Q Consensus 263 ---------------------------~~~~~~v~---~~G~lY~~~~~~--------~---~i~~yD~~~~~W~~i~-~ 300 (453)
.....++. .+|+||++++.. . .+..||+.+++|..+. .
T Consensus 371 v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 450 (656)
T 1k3i_A 371 MNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASN 450 (656)
T ss_dssp EEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTT
T ss_pred eeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccC
Confidence 00011222 389999997631 2 6889999999999874 3
Q ss_pred CCccccCCCceeee-CCeEEEEEEEeccC-C-CCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCC
Q 045071 301 PMRRFLRSPSLLDS-NGKLILVAAVEKSK-L-NVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGE 377 (453)
Q Consensus 301 p~~~~~~~~~lv~~-~g~L~vv~~~~~~~-~-~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~ 377 (453)
++|..+..+..+.. +|+||++|+..... . .....-.++.+|+.+++|+++..|+... ......++..++
T Consensus 451 ~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R--------~~hs~a~ll~dg 522 (656)
T 1k3i_A 451 GLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVR--------VYHSISLLLPDG 522 (656)
T ss_dssp CCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCC--------CTTEEEEECTTS
T ss_pred CCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCcc--------ccccHhhcCCCc
Confidence 55554455555665 99999999864321 0 0011225566677789999988876411 111222222377
Q ss_pred EEEEEEc
Q 045071 378 FIVIVIR 384 (453)
Q Consensus 378 ~I~l~~~ 384 (453)
.||+.+.
T Consensus 523 ~v~v~GG 529 (656)
T 1k3i_A 523 RVFNGGG 529 (656)
T ss_dssp CEEEEEC
T ss_pred EEEecCC
Confidence 7888765
No 19
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.99 E-value=1.4e-10 Score=79.26 Aligned_cols=46 Identities=33% Similarity=0.689 Sum_probs=39.3
Q ss_pred ccccCCChHHHHHHHHhcCChhhhhhhhhccccccccccCccchhh
Q 045071 48 SRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLEL 93 (453)
Q Consensus 48 ~~~w~~LP~dll~~IL~rLp~~~l~r~r~VCK~W~~~i~s~~F~~~ 93 (453)
...|..||+|++.+||++||..++.+++.|||+|+.++.++.|.+.
T Consensus 6 ~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~ 51 (53)
T 1fs1_A 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (53)
T ss_dssp ---CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC--
T ss_pred CCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHh
Confidence 4568999999999999999999999999999999999998877553
No 20
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.78 E-value=1.2e-09 Score=101.30 Aligned_cols=56 Identities=30% Similarity=0.388 Sum_probs=46.8
Q ss_pred CCccccccccCCChHHHHHHHHhcCChhhhh-hhhhccccccccccCccchhhhhcc
Q 045071 42 ACPWMDSRIWSKLPQRLLDRVLAFLPPPAFF-RARAVCKRWYGLLFSNSFLELYIHV 97 (453)
Q Consensus 42 ~~~~~~~~~w~~LP~dll~~IL~rLp~~~l~-r~r~VCK~W~~~i~s~~F~~~~~~~ 97 (453)
..+.|+......||+|||.+||++||.++|+ ||++|||+|++++.++.|.+.+.+.
T Consensus 42 ~~~~~~~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~ 98 (297)
T 2e31_A 42 EEEAEAVEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQ 98 (297)
T ss_dssp -----CCCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHH
T ss_pred cCccccccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhc
Confidence 3445555678899999999999999999999 9999999999999999998887654
No 21
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.50 E-value=3.2e-05 Score=76.67 Aligned_cols=47 Identities=30% Similarity=0.429 Sum_probs=42.4
Q ss_pred ccccCCChHHHHHHHHhcCChhhhhhhhhccccccccccCccchhhh
Q 045071 48 SRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELY 94 (453)
Q Consensus 48 ~~~w~~LP~dll~~IL~rLp~~~l~r~r~VCK~W~~~i~s~~F~~~~ 94 (453)
...+..||+|++.+||+.|+.++|++++.|||+|+.++.++.+.+..
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~ 62 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREK 62 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhh
Confidence 35678999999999999999999999999999999999988876654
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.46 E-value=2.5e-05 Score=77.68 Aligned_cols=44 Identities=14% Similarity=0.344 Sum_probs=39.4
Q ss_pred ccccCCChHHHHHHHHhcCChhhhhhhhhccccccccccC-ccch
Q 045071 48 SRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFS-NSFL 91 (453)
Q Consensus 48 ~~~w~~LP~dll~~IL~rLp~~~l~r~r~VCK~W~~~i~s-~~F~ 91 (453)
...+..||+|++.+||+.|+.++|++++.|||+|+.++.+ +.+.
T Consensus 12 ~d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w 56 (464)
T 3v7d_B 12 RDLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLW 56 (464)
T ss_dssp CCHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHH
T ss_pred cCChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 3567889999999999999999999999999999999987 5543
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.37 E-value=5.4e-06 Score=82.15 Aligned_cols=48 Identities=23% Similarity=0.543 Sum_probs=42.0
Q ss_pred cccccCCChHH----HHHHHHhcCChhhhhhhhhccccccccccCccchhhh
Q 045071 47 DSRIWSKLPQR----LLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELY 94 (453)
Q Consensus 47 ~~~~w~~LP~d----ll~~IL~rLp~~~l~r~r~VCK~W~~~i~s~~F~~~~ 94 (453)
.......||+| |+.+||+.|+..+|+++++|||+|+.++.++.+.+..
T Consensus 7 ~~d~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~ 58 (435)
T 1p22_A 7 QRDFITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKL 58 (435)
T ss_dssp CCCHHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHH
T ss_pred hcChHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHH
Confidence 34567889999 9999999999999999999999999999988765543
No 24
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.62 E-value=9e-06 Score=74.58 Aligned_cols=49 Identities=14% Similarity=0.299 Sum_probs=43.8
Q ss_pred cccCCChHHHHHHHHhcCChhhhhhhhhccccccccccCccchhhhhcc
Q 045071 49 RIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFLELYIHV 97 (453)
Q Consensus 49 ~~w~~LP~dll~~IL~rLp~~~l~r~r~VCK~W~~~i~s~~F~~~~~~~ 97 (453)
..|.+||+|++.+||+.|+.++|+++.+|||+||.+..++...+.+..+
T Consensus 3 ~~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~r 51 (312)
T 3l2o_B 3 STLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLR 51 (312)
T ss_dssp CHHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHS
T ss_pred chhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhc
Confidence 3467899999999999999999999999999999999999887766543
No 25
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.52 E-value=2.7e-05 Score=74.21 Aligned_cols=44 Identities=34% Similarity=0.717 Sum_probs=39.5
Q ss_pred ccccCCChHHHHHHHHhcCChhhhhhhhhccccccccccCccch
Q 045071 48 SRIWSKLPQRLLDRVLAFLPPPAFFRARAVCKRWYGLLFSNSFL 91 (453)
Q Consensus 48 ~~~w~~LP~dll~~IL~rLp~~~l~r~r~VCK~W~~~i~s~~F~ 91 (453)
...|.+||+|++.+|+.+|+..++.+++.|||+|+.+..++...
T Consensus 6 ~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~ 49 (336)
T 2ast_B 6 GVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW 49 (336)
T ss_dssp -CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTS
T ss_pred cCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhh
Confidence 46799999999999999999999999999999999998776543
No 26
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.14 E-value=0.00011 Score=75.86 Aligned_cols=39 Identities=31% Similarity=0.665 Sum_probs=29.3
Q ss_pred ccccccCCChHHHHHHHHhcCC-hhhhhhhhhcccccccc
Q 045071 46 MDSRIWSKLPQRLLDRVLAFLP-PPAFFRARAVCKRWYGL 84 (453)
Q Consensus 46 ~~~~~w~~LP~dll~~IL~rLp-~~~l~r~r~VCK~W~~~ 84 (453)
|....|++||+|++.+||++|| .+++.+++.|||+|+.+
T Consensus 1 ~~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 1 MQKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ---------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred CcccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 4457899999999999999999 99999999999999987
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.83 E-value=0.16 Score=47.64 Aligned_cols=226 Identities=10% Similarity=0.015 Sum_probs=117.0
Q ss_pred ceeeeCCCCCeEecc-C---C-CCCCCCeeeeecCceEEEEecCCCCeeEEEEcCcccce-ecCCCCCCCCCcceEEEEE
Q 045071 139 GYLFDPHELSWYRIS-F---A-LVPSEFSPASSSGGLVCWVSDHAGAKTLILCNPVTGSL-SQLPPTLRPRLFPSIGLKV 212 (453)
Q Consensus 139 ~~~fdp~~~~w~~l~-l---~-~lp~~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w-~~LP~~~~~r~~~~~~~~~ 212 (453)
...+|+.++++.+-- . . .+.....-++..++.+++.... ...+.++|+.|.+. ..++....+ .++..
T Consensus 19 l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~~~lyv~~~~--~~~v~viD~~t~~~~~~i~~~~~p-----~~i~~ 91 (328)
T 3dsm_A 19 LSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRDGIGWIVVNN--SHVIFAIDINTFKEVGRITGFTSP-----RYIHF 91 (328)
T ss_dssp EEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEETTEEEEEEGG--GTEEEEEETTTCCEEEEEECCSSE-----EEEEE
T ss_pred EEEEECCCCEEhhhhHhhhcCcccCccceEEEEECCEEEEEEcC--CCEEEEEECcccEEEEEcCCCCCC-----cEEEE
Confidence 357888877664310 0 0 0111112233456777776543 34789999998876 445432221 13444
Q ss_pred cCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCc--ccCCCCCeEEECCEEEEEec-CCCEEEEEE
Q 045071 213 TPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRL--CSLESGRMVQVNGKFYCMNY-SPFSVLAYD 289 (453)
Q Consensus 213 ~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~--~~~~~~~~v~~~G~lY~~~~-~~~~i~~yD 289 (453)
+++. ++|+.... .....++|..+ ++-...-..+.. ........++.++++|+... ....|.++|
T Consensus 92 ~~~g-~lyv~~~~--------~~~v~~iD~~t----~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 92 LSDE-KAYVTQIW--------DYRIFIINPKT----YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp EETT-EEEEEEBS--------CSEEEEEETTT----TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEE
T ss_pred eCCC-eEEEEECC--------CCeEEEEECCC----CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEE
Confidence 3333 77776531 12446777776 332211111110 00011234557899999875 357899999
Q ss_pred CCCCcEEE-eecCCccccCCCcee-eeCCeEEEEEEEeccCCC-CCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccC
Q 045071 290 ISANAWFN-IQAPMRRFLRSPSLL-DSNGKLILVAAVEKSKLN-VPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEA 366 (453)
Q Consensus 290 ~~~~~W~~-i~~p~~~~~~~~~lv-~~~g~L~vv~~~~~~~~~-~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~ 366 (453)
+++.+... +.... ....++ .-+|++|+++........ ....-.|+++|..+.+.++.-.++.. ..
T Consensus 159 ~~t~~~~~~i~~g~----~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g--------~~ 226 (328)
T 3dsm_A 159 TETDKVVDELTIGI----QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG--------DW 226 (328)
T ss_dssp TTTTEEEEEEECSS----CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT--------CC
T ss_pred CCCCeEEEEEEcCC----CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC--------CC
Confidence 99987543 32211 111232 346898876642210000 00012678888766655443334320 00
Q ss_pred CCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 367 GNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 367 ~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
...+.....++.+|+... .+.+||.++.+.
T Consensus 227 p~~la~~~d~~~lyv~~~---~v~~~d~~t~~~ 256 (328)
T 3dsm_A 227 PSEVQLNGTRDTLYWINN---DIWRMPVEADRV 256 (328)
T ss_dssp CEEEEECTTSCEEEEESS---SEEEEETTCSSC
T ss_pred ceeEEEecCCCEEEEEcc---EEEEEECCCCce
Confidence 112333335788988643 899999998775
No 28
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.34 E-value=0.11 Score=48.66 Aligned_cols=239 Identities=14% Similarity=0.141 Sum_probs=111.5
Q ss_pred eeeeCCCCCeEeccC-CCCCCCCeeeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceE
Q 045071 140 YLFDPHELSWYRISF-ALVPSEFSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVD 218 (453)
Q Consensus 140 ~~fdp~~~~w~~l~l-~~lp~~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~yk 218 (453)
+.+|+.++++..+.. ........+.-+.+|-|++.........+.+++..+++.+.+.........+ .++.+++++-.
T Consensus 21 ~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p-~~~a~spdg~~ 99 (347)
T 3hfq_A 21 GTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPP-AYVAVDEARQL 99 (347)
T ss_dssp EEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCC-SEEEEETTTTE
T ss_pred EEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCC-EEEEECCCCCE
Confidence 456766666544321 1111112233345666555443222357889998777765544321111111 13444444445
Q ss_pred EEEEccCCCCcccccccceeEEEcccCCCCCcccccCCC------CCcccCCC-CCeEE--ECCEEEEEecCCCEEEEEE
Q 045071 219 VTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSL------PRLCSLES-GRMVQ--VNGKFYCMNYSPFSVLAYD 289 (453)
Q Consensus 219 vv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~------p~~~~~~~-~~~v~--~~G~lY~~~~~~~~i~~yD 289 (453)
++++.... ....+|+.... +..+.+... |....... ...+. -+|++|+.......|..||
T Consensus 100 l~~~~~~~--------~~v~v~~~~~~---g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 100 VYSANYHK--------GTAEVMKIAAD---GALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp EEEEETTT--------TEEEEEEECTT---SCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred EEEEeCCC--------CEEEEEEeCCC---CCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 66554221 23466665421 222221111 00000000 01122 2677787766557899999
Q ss_pred CC-CCcEEEeec-CCccccCCC-ce-eeeCCe-EEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeec---CHHHHHHh
Q 045071 290 IS-ANAWFNIQA-PMRRFLRSP-SL-LDSNGK-LILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERM---PQQLYAQF 361 (453)
Q Consensus 290 ~~-~~~W~~i~~-p~~~~~~~~-~l-v~~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~m---p~~~~~~~ 361 (453)
+. +++...+.. ..+.. ..+ .+ +.-+|+ ||+++. . ...+.+|.++..+++++.+..+ +.. +
T Consensus 169 ~~~~g~~~~~~~~~~~~g-~~p~~~~~spdg~~l~v~~~-~------~~~v~v~~~~~~~g~~~~~~~~~~~~~~----~ 236 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAG-FGPRHLVFSPDGQYAFLAGE-L------SSQIASLKYDTQTGAFTQLGIVKTIPAD----Y 236 (347)
T ss_dssp ECTTSCEEEEEEEECCTT-CCEEEEEECTTSSEEEEEET-T------TTEEEEEEEETTTTEEEEEEEEESSCTT----C
T ss_pred ECCCCcEEEeeeEEcCCC-CCCceEEECCCCCEEEEEeC-C------CCEEEEEEecCCCCceEEeeeeeecCCC----C
Confidence 98 565544321 11111 111 12 223676 554331 1 2367899988756666554433 321 0
Q ss_pred hcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCC-CceEEc
Q 045071 362 AEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCM-KSWQWI 402 (453)
Q Consensus 362 ~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~-~~W~~l 402 (453)
........+.....|..||+.....+.+.+||+.. ++++.+
T Consensus 237 ~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~ 278 (347)
T 3hfq_A 237 TAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLI 278 (347)
T ss_dssp CSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEE
T ss_pred CCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEe
Confidence 00000011222335678888776678899999873 345444
No 29
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.91 E-value=0.91 Score=40.75 Aligned_cols=189 Identities=12% Similarity=0.077 Sum_probs=98.0
Q ss_pred cCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCC
Q 045071 167 SGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGG 246 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~ 246 (453)
.+|.|++.... ...+.++++-++.-..+-.. ....-.++.+++..-++|++... .....+++.+.
T Consensus 46 ~~~~ly~~d~~--~~~I~~~~~~g~~~~~~~~~---~~~~p~~ia~d~~~~~lyv~d~~--------~~~I~~~~~~g-- 110 (267)
T 1npe_A 46 VDKVVYWTDIS--EPSIGRASLHGGEPTTIIRQ---DLGSPEGIALDHLGRTIFWTDSQ--------LDRIEVAKMDG-- 110 (267)
T ss_dssp TTTEEEEEETT--TTEEEEEESSSCCCEEEECT---TCCCEEEEEEETTTTEEEEEETT--------TTEEEEEETTS--
T ss_pred CCCEEEEEECC--CCEEEEEecCCCCcEEEEEC---CCCCccEEEEEecCCeEEEEECC--------CCEEEEEEcCC--
Confidence 46777776543 34788888876543222111 11122356666544567776542 12446676654
Q ss_pred CCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecC--CCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEE
Q 045071 247 FFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYS--PFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLI 319 (453)
Q Consensus 247 ~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~--~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~ 319 (453)
..-+.+..... . .....++- +|.+||.... ...|.+++++...-..+... ....+ .++. .+++||
T Consensus 111 --~~~~~~~~~~~--~-~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~---~~~~P~gia~d~~~~~ly 182 (267)
T 1npe_A 111 --TQRRVLFDTGL--V-NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQD---NLGLPNGLTFDAFSSQLC 182 (267)
T ss_dssp --CSCEEEECSSC--S-SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECT---TCSCEEEEEEETTTTEEE
T ss_pred --CCEEEEEECCC--C-CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEEC---CCCCCcEEEEcCCCCEEE
Confidence 22122211100 0 01223333 5899998754 35889999876544333211 11222 2332 257888
Q ss_pred EEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 320 LVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 320 vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
+.... . . .|++++.....-..+.. . ...+......++.+|+.....+.+.++|..+.+.
T Consensus 183 v~d~~--~-----~--~I~~~~~~g~~~~~~~~--~----------~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 183 WVDAG--T-----H--RAECLNPAQPGRRKVLE--G----------LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKE 241 (267)
T ss_dssp EEETT--T-----T--EEEEEETTEEEEEEEEE--C----------CCSEEEEEEETTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEECC--C-----C--EEEEEecCCCceEEEec--C----------CCCceEEEEeCCEEEEEECCCCeEEEEeCCCCCc
Confidence 75531 1 1 56666654321111111 0 1123333345899999887778999999987654
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=95.81 E-value=1.2 Score=41.46 Aligned_cols=183 Identities=7% Similarity=-0.028 Sum_probs=95.2
Q ss_pred CeeEEEEcCcccceecCC-C--CCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcc-cccC
Q 045071 180 AKTLILCNPVTGSLSQLP-P--TLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLW-GTTS 255 (453)
Q Consensus 180 ~~~~~v~NP~T~~w~~LP-~--~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W-~~~~ 255 (453)
...+.++||.|++...-- . -..+-....-++..+. -+++++... .....++|..+ .+- ..+.
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~~--~~lyv~~~~--------~~~v~viD~~t----~~~~~~i~ 81 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIRD--GIGWIVVNN--------SHVIFAIDINT----FKEVGRIT 81 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEET--TEEEEEEGG--------GTEEEEEETTT----CCEEEEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEEC--CEEEEEEcC--------CCEEEEEECcc----cEEEEEcC
Confidence 357899999998865311 0 0001011111333332 266666442 12457888877 332 1122
Q ss_pred CCCCcccCCCCCeEE-ECCEEEEEecCCCEEEEEECCCCcEE-EeecCCcc-cc-CCCceeeeCCeEEEEEEEeccCCCC
Q 045071 256 SLPRLCSLESGRMVQ-VNGKFYCMNYSPFSVLAYDISANAWF-NIQAPMRR-FL-RSPSLLDSNGKLILVAAVEKSKLNV 331 (453)
Q Consensus 256 ~~p~~~~~~~~~~v~-~~G~lY~~~~~~~~i~~yD~~~~~W~-~i~~p~~~-~~-~~~~lv~~~g~L~vv~~~~~~~~~~ 331 (453)
.... ....++ -+|++|+.......|.++|+.+.+.. .++.+... .. ....++..+++||+... ...
T Consensus 82 ~~~~-----p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~-~~~---- 151 (328)
T 3dsm_A 82 GFTS-----PRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW-SYQ---- 151 (328)
T ss_dssp CCSS-----EEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC-TTC----
T ss_pred CCCC-----CcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC-CCC----
Confidence 1111 122344 68999998844579999999998754 33332200 00 11134447889987642 111
Q ss_pred CCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCC----------CeEEEEECCCCceE
Q 045071 332 PKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGS----------DKALLFDLCMKSWQ 400 (453)
Q Consensus 332 ~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~----------~~v~~Yd~~~~~W~ 400 (453)
. .|+.+|..+++..+.-.... ....+. +..++.+|+..... ..+.++|.++.+..
T Consensus 152 -~--~v~viD~~t~~~~~~i~~g~----------~p~~i~-~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 152 -N--RILKIDTETDKVVDELTIGI----------QPTSLV-MDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp -C--EEEEEETTTTEEEEEEECSS----------CBCCCE-ECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred -C--EEEEEECCCCeEEEEEEcCC----------CccceE-EcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE
Confidence 1 56677765554433222211 001222 22356688776543 68999999988765
No 31
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=95.44 E-value=0.0036 Score=64.35 Aligned_cols=33 Identities=21% Similarity=0.627 Sum_probs=31.3
Q ss_pred CCChHHHHHHHHhcC-Chhhhhhhhhcccccccc
Q 045071 52 SKLPQRLLDRVLAFL-PPPAFFRARAVCKRWYGL 84 (453)
Q Consensus 52 ~~LP~dll~~IL~rL-p~~~l~r~r~VCK~W~~~ 84 (453)
++||||++.+||++| +.+++.+++.|||+|+.+
T Consensus 14 ~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 14 VATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 579999999999999 899999999999999887
No 32
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.26 E-value=0.25 Score=44.21 Aligned_cols=109 Identities=11% Similarity=0.094 Sum_probs=71.5
Q ss_pred eEEECCEEEEEecC--CCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 268 MVQVNGKFYCMNYS--PFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 268 ~v~~~G~lY~~~~~--~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
..+.++.+|.-++. ...|..+|+++++-..- .+++.....-.+...+++||++.. +.. .+|++|. .
T Consensus 26 L~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~-~~l~~~~fgeGi~~~~~~ly~ltw--~~~-------~v~v~D~--~ 93 (243)
T 3mbr_X 26 LFYLRGHLYESTGETGRSSVRKVDLETGRILQR-AEVPPPYFGAGIVAWRDRLIQLTW--RNH-------EGFVYDL--A 93 (243)
T ss_dssp EEEETTEEEEEECCTTSCEEEEEETTTCCEEEE-EECCTTCCEEEEEEETTEEEEEES--SSS-------EEEEEET--T
T ss_pred EEEECCEEEEECCCCCCceEEEEECCCCCEEEE-EeCCCCcceeEEEEeCCEEEEEEe--eCC-------EEEEEEC--C
Confidence 45678899987654 35899999999876442 222222222245667899999753 221 7888885 4
Q ss_pred CeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 346 LWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 346 ~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
..+.+.+++-. ..++.+...++.+|+... .+++.++|+++.+-
T Consensus 94 tl~~~~ti~~~----------~~Gwglt~dg~~L~vSdg-s~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 94 TLTPRARFRYP----------GEGWALTSDDSHLYMSDG-TAVIRKLDPDTLQQ 136 (243)
T ss_dssp TTEEEEEEECS----------SCCCEEEECSSCEEEECS-SSEEEEECTTTCCE
T ss_pred cCcEEEEEeCC----------CCceEEeeCCCEEEEECC-CCeEEEEeCCCCeE
Confidence 45666666531 124555667788888764 78899999988543
No 33
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.16 E-value=1.8 Score=39.14 Aligned_cols=187 Identities=11% Similarity=-0.005 Sum_probs=100.0
Q ss_pred EEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEE
Q 045071 209 GLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAY 288 (453)
Q Consensus 209 ~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~y 288 (453)
|+.++. . .+|...+.. ...+..++|.+++ +=...-.++. ..........++++|.++.....+.+|
T Consensus 47 GL~~~~-~-~LyestG~~------g~S~v~~vD~~Tg----kv~~~~~l~~--~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 47 GFFYRN-G-YFYESTGLN------GRSSIRKVDIESG----KTLQQIELGK--RYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp EEEEET-T-EEEEEEEET------TEEEEEEECTTTC----CEEEEEECCT--TCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred eEEEEC-C-EEEEECCCC------CCceEEEEECCCC----cEEEEEecCC--ccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 565552 2 566655431 1235578888873 2222112332 111122456788999999877899999
Q ss_pred ECCCCcE-EEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCC
Q 045071 289 DISANAW-FNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAG 367 (453)
Q Consensus 289 D~~~~~W-~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~ 367 (453)
|+++.+- ..++.+. ....+...+++||+..+ .+ +||.+|+.+.+= +.+++.... .. ....-
T Consensus 113 D~~t~~~~~ti~~~~----eG~glt~dg~~L~~SdG--s~--------~i~~iDp~T~~v--~~~I~V~~~-g~-~~~~l 174 (262)
T 3nol_A 113 NIRNLRQVRSFNYDG----EGWGLTHNDQYLIMSDG--TP--------VLRFLDPESLTP--VRTITVTAH-GE-ELPEL 174 (262)
T ss_dssp ETTTCCEEEEEECSS----CCCCEEECSSCEEECCS--SS--------EEEEECTTTCSE--EEEEECEET-TE-ECCCE
T ss_pred ECccCcEEEEEECCC----CceEEecCCCEEEEECC--CC--------eEEEEcCCCCeE--EEEEEeccC-Cc-ccccc
Confidence 9998654 3444432 22345555677777442 11 789999865443 333322000 00 00000
Q ss_pred CcEEEEeeCCEEEEEEcCCCeEEEEECCCCceE-EcCCCCCcCCCCCCCCCCCCCceeEEEEeccc
Q 045071 368 NGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQ-WIPRCPYVQANNCGGNYGDGEGELHGFAYEPR 432 (453)
Q Consensus 368 ~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~-~l~~~p~~~~~~~~~~~~~~~~~~~~~~f~P~ 432 (453)
..+.++ ++.||+.....+.|.+-|+++.+-. ++.--...+.... ... .+..+.|++|.|.
T Consensus 175 NELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~-~~~--~~~vlNGIA~dp~ 235 (262)
T 3nol_A 175 NELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGP-LPS--PIDVLNGIAWDKE 235 (262)
T ss_dssp EEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCS-CCS--SCCCEEEEEEETT
T ss_pred ceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCcccccc-ccC--cCCceEEEEEcCC
Confidence 113333 6789988777889999999998743 3321111110000 000 1235789999984
No 34
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.02 E-value=4.3 Score=42.99 Aligned_cols=188 Identities=10% Similarity=0.055 Sum_probs=97.8
Q ss_pred cCceEEEEecCCCCeeEEEEcCccc----c-eecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEE
Q 045071 167 SGGLVCWVSDHAGAKTLILCNPVTG----S-LSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFH 241 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP~T~----~-w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyd 241 (453)
..|.||+.... ...+++.++-.. . ...+.. ....-.|++++...-+||++... ...+++++
T Consensus 434 ~~~~lY~sD~~--~~~I~~~~l~g~~~~~~~~~vi~~----~l~~P~GLAvD~~~~~LY~tD~~--------~~~I~v~~ 499 (791)
T 3m0c_C 434 ASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISR----DIQAPDGLAVDWIHSNIYWTDSV--------LGTVSVAD 499 (791)
T ss_dssp TTTEEEEEETT--TTEEEEEEC--------CEEEECS----SCSCCCEEEEETTTTEEEEEETT--------TTEEEEEE
T ss_pred cCCeeEEeecc--ceeEEEEeccCCCCCcceeEEEec----CCCCcceeeeeecCCcEEEEecC--------CCeEEEEe
Confidence 46777776543 235666665432 1 122211 01112266676555578887542 23456777
Q ss_pred cccCCCCCcccccCCCCCcccCCCCCeEEE---CCEEEEEecCC-CEEEEEECCCCcEEEeecCCccccCCC-ceee--e
Q 045071 242 IDAGGFFSLWGTTSSLPRLCSLESGRMVQV---NGKFYCMNYSP-FSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--S 314 (453)
Q Consensus 242 s~~~~~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lY~~~~~~-~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~ 314 (453)
.+. ..-+.+..- .+.....+.+ +|.|||..... ..|.++++....-..+.. ..+..+ .|+. .
T Consensus 500 ldG----~~~~~l~~~----~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~---~~l~~P~GLavD~~ 568 (791)
T 3m0c_C 500 TKG----VKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGITLDLL 568 (791)
T ss_dssp TTS----SSEEEEEEC----TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEEC---SSCSCEEEEEEETT
T ss_pred CCC----CeEEEEEeC----CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEe---CCCCCceEEEEecC
Confidence 665 333332210 0111123333 58999997543 689999998765544421 112223 2432 4
Q ss_pred CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEEC
Q 045071 315 NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDL 394 (453)
Q Consensus 315 ~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~ 394 (453)
+++||++.. +. . .|+.++.+...=..+..-... ...++.....++.||++....+.|...|.
T Consensus 569 ~~~LYwaD~--~~-----~--~I~~~d~dG~~~~~v~~~~~~---------l~~P~glav~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 569 SGRLYWVDS--KL-----H--SISSIDVNGGNRKTILEDEKR---------LAHPFSLAVFEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp TTEEEEEET--TT-----T--EEEEEETTSCSCEEEEECTTT---------TSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred CCeEEEEeC--CC-----C--cEEEEecCCCceEEEecCCCc---------cCCCCEEEEeCCEEEEEECCCCEEEEEeC
Confidence 789998652 21 1 566666543322223221110 01244444578899998877789999997
Q ss_pred CCC
Q 045071 395 CMK 397 (453)
Q Consensus 395 ~~~ 397 (453)
.++
T Consensus 631 ~tG 633 (791)
T 3m0c_C 631 LTG 633 (791)
T ss_dssp TTC
T ss_pred CCC
Confidence 654
No 35
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.75 E-value=1.7 Score=38.75 Aligned_cols=188 Identities=11% Similarity=0.117 Sum_probs=101.4
Q ss_pred EEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEE
Q 045071 209 GLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAY 288 (453)
Q Consensus 209 ~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~y 288 (453)
|+.+++ -.+|...+.. ...+..++|.+++ +=.....++. .......+..++++|.++.....+.+|
T Consensus 25 GL~~~~--~~LyestG~~------g~S~v~~vD~~tg----kv~~~~~l~~--~~fgeGi~~~~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 25 GLFYLR--GHLYESTGET------GRSSVRKVDLETG----RILQRAEVPP--PYFGAGIVAWRDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp EEEEET--TEEEEEECCT------TSCEEEEEETTTC----CEEEEEECCT--TCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred cEEEEC--CEEEEECCCC------CCceEEEEECCCC----CEEEEEeCCC--CcceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 666654 2566655432 1245678888883 3222223332 111123466789999999877899999
Q ss_pred ECCCCcE-EEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCC
Q 045071 289 DISANAW-FNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAG 367 (453)
Q Consensus 289 D~~~~~W-~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~ 367 (453)
|.++.+- ..++.+. ....+...+++||+-.+ . . +|+.+|+.+.+= +.+++... ..+ ....-
T Consensus 91 D~~tl~~~~ti~~~~----~Gwglt~dg~~L~vSdg--s-~-------~l~~iDp~t~~~--~~~I~V~~-~g~-~~~~l 152 (243)
T 3mbr_X 91 DLATLTPRARFRYPG----EGWALTSDDSHLYMSDG--T-A-------VIRKLDPDTLQQ--VGSIKVTA-GGR-PLDNL 152 (243)
T ss_dssp ETTTTEEEEEEECSS----CCCEEEECSSCEEEECS--S-S-------EEEEECTTTCCE--EEEEECEE-TTE-ECCCE
T ss_pred ECCcCcEEEEEeCCC----CceEEeeCCCEEEEECC--C-C-------eEEEEeCCCCeE--EEEEEEcc-CCc-ccccc
Confidence 9998654 3344332 22345555677887443 1 1 788899865543 33332100 000 00000
Q ss_pred CcEEEEeeCCEEEEEEcCCCeEEEEECCCCce-EEcCCCCCcCCCCCCCCCCCCCceeEEEEeccc
Q 045071 368 NGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW-QWIPRCPYVQANNCGGNYGDGEGELHGFAYEPR 432 (453)
Q Consensus 368 ~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W-~~l~~~p~~~~~~~~~~~~~~~~~~~~~~f~P~ 432 (453)
..+.+ .++.||......+.|.+-|+++.+- .++.--...+.....+ ...+..+.|++|.|.
T Consensus 153 NeLe~--~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~--~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 153 NELEW--VNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALT--DSTNDVLNGIAFDAE 214 (243)
T ss_dssp EEEEE--ETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCC--CTTSSCEEEEEEETT
T ss_pred eeeEE--eCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCcccccccc--CCcCCceEEEEEcCC
Confidence 12333 3788998776688999999999864 2332111111100000 001236789999984
No 36
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.72 E-value=3.1 Score=39.82 Aligned_cols=188 Identities=13% Similarity=0.055 Sum_probs=98.4
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
..+|.|++.... ...++++++-++....+-..... .-.++.++...-+||++.... ...++++.+.
T Consensus 125 ~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~~---~p~glavd~~~g~lY~~d~~~--------~~I~~~~~dg- 190 (386)
T 3v65_B 125 HRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGLE---SPGGLAVDWVHDKLYWTDSGT--------SRIEVANLDG- 190 (386)
T ss_dssp TTTTEEEEEETT--TTEEEEEETTSCCEEEEECSSCS---CCCCEEEETTTTEEEEEETTT--------TEEEECBTTS-
T ss_pred cCCCeEEEEeCC--CCcEEEEecCCCCcEEEEeCCCC---CccEEEEEeCCCeEEEEcCCC--------CeEEEEeCCC-
Confidence 357888877543 34788888887654433211110 112456665445777764421 2334554443
Q ss_pred CCCCcccccCCCCCcccCCC-CCeEEE--CCEEEEEecCC-CEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeE
Q 045071 246 GFFSLWGTTSSLPRLCSLES-GRMVQV--NGKFYCMNYSP-FSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKL 318 (453)
Q Consensus 246 ~~~~~W~~~~~~p~~~~~~~-~~~v~~--~G~lY~~~~~~-~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L 318 (453)
..-+.+..- .+.. ...++- +|.+||..... ..|..+|+....-..+... ....+ .|+. .+++|
T Consensus 191 ---~~~~~l~~~----~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~~~~PnGlavd~~~~~l 260 (386)
T 3v65_B 191 ---AHRKVLLWQ----SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADT---HLFWPNGLTIDYAGRRM 260 (386)
T ss_dssp ---CSCEEEECS----SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSCEEEEEEEGGGTEE
T ss_pred ---CceEEeecC----CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEEC---CCCCeeeEEEeCCCCEE
Confidence 221111110 0111 122332 68999997665 7899999987654443211 11222 2333 47899
Q ss_pred EEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCC
Q 045071 319 ILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 319 ~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
|++.. .. . .|++++.+...-..+..-. ...+......++.||+.....++|..+|..+.
T Consensus 261 Y~aD~--~~-----~--~I~~~d~dG~~~~~~~~~~-----------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 261 YWVDA--KH-----H--VIERANLDGSHRKAVISQG-----------LPHPFAITVFEDSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEEET--TT-----T--EEEEECTTSCSCEEEECSS-----------CSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEC--CC-----C--EEEEEeCCCCeeEEEEECC-----------CCCceEEEEECCEEEEeeCCCCeEEEEECCCC
Confidence 98653 21 1 6677765432222222111 01233333368899999877889999995444
No 37
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=94.65 E-value=2.8 Score=38.87 Aligned_cols=188 Identities=11% Similarity=0.077 Sum_probs=96.6
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcc----ccee-cCCC-CCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeE
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVT----GSLS-QLPP-TLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSES 239 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T----~~w~-~LP~-~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~ev 239 (453)
..+|.|++.... ...++++++.+ .... .++. +.. + .+++++...-++|++... ....++
T Consensus 39 ~~~~~ly~~D~~--~~~I~~~~~~g~~~~~~~~~~~~~~~~~----p-~glavd~~~~~ly~~d~~--------~~~I~~ 103 (316)
T 1ijq_A 39 VASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQA----P-DGLAVDWIHSNIYWTDSV--------LGTVSV 103 (316)
T ss_dssp TTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSC----C-CEEEEETTTTEEEEEETT--------TTEEEE
T ss_pred eCCCEEEEEECC--CCcEEEEECCCCCCCcccEEEEeCCCCC----c-CEEEEeecCCeEEEEECC--------CCEEEE
Confidence 356788877643 34788888876 2211 1221 111 1 256666444567776432 124466
Q ss_pred EEcccCCCCCcccccC--CCCCcccCCCCCeEE--ECCEEEEEecCC-CEEEEEECCCCcEEEeecCCccccCCC-ceee
Q 045071 240 FHIDAGGFFSLWGTTS--SLPRLCSLESGRMVQ--VNGKFYCMNYSP-FSVLAYDISANAWFNIQAPMRRFLRSP-SLLD 313 (453)
Q Consensus 240 yds~~~~~~~~W~~~~--~~p~~~~~~~~~~v~--~~G~lY~~~~~~-~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~ 313 (453)
++.+. ..=+.+. .+.. ....++ .+|.+||..... ..|.++|++...-+.+... ....+ .|+.
T Consensus 104 ~~~~g----~~~~~~~~~~~~~-----P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~---~~~~P~gla~ 171 (316)
T 1ijq_A 104 ADTKG----VKRKTLFRENGSK-----PRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNGITL 171 (316)
T ss_dssp EETTS----SSEEEEEECTTCC-----EEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECS---SCSCEEEEEE
T ss_pred EeCCC----CceEEEEECCCCC-----cceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEEC---CCCCceEEEE
Confidence 77654 2212111 1111 022333 268999987653 6899999986554433111 11222 3333
Q ss_pred --eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEE
Q 045071 314 --SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALL 391 (453)
Q Consensus 314 --~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~ 391 (453)
.+++||++.. .. . .|+.++.+...-..+...+.. ...++.....++.||+.....++|..
T Consensus 172 d~~~~~lY~~D~--~~-----~--~I~~~d~dg~~~~~~~~~~~~---------~~~P~giav~~~~ly~~d~~~~~V~~ 233 (316)
T 1ijq_A 172 DLLSGRLYWVDS--KL-----H--SISSIDVNGGNRKTILEDEKR---------LAHPFSLAVFEDKVFWTDIINEAIFS 233 (316)
T ss_dssp ETTTTEEEEEET--TT-----T--EEEEEETTSCSCEEEEECTTT---------TSSEEEEEEETTEEEEEETTTTEEEE
T ss_pred eccCCEEEEEEC--CC-----C--eEEEEecCCCceEEEeecCCc---------cCCcEEEEEECCEEEEEECCCCeEEE
Confidence 3688998653 11 1 566666543222333332110 01233333357899998877889999
Q ss_pred EECCCCc
Q 045071 392 FDLCMKS 398 (453)
Q Consensus 392 Yd~~~~~ 398 (453)
+|..+.+
T Consensus 234 ~~~~~g~ 240 (316)
T 1ijq_A 234 ANRLTGS 240 (316)
T ss_dssp EETTTCC
T ss_pred EeCCCCc
Confidence 9986543
No 38
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.65 E-value=3 Score=39.29 Aligned_cols=190 Identities=16% Similarity=0.131 Sum_probs=100.0
Q ss_pred eeeecCceEEEEecCCCCeeEEEEcCcccc--eecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEE
Q 045071 163 PASSSGGLVCWVSDHAGAKTLILCNPVTGS--LSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESF 240 (453)
Q Consensus 163 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~--w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evy 240 (453)
..+..+|.|++.... ..++.+|+.|++ |+.-..- .....+. ..+ -+|++...+ -....|
T Consensus 98 ~~~~~~~~v~v~~~~---g~l~a~d~~tG~~~W~~~~~~-~~~~~p~---~~~---~~v~v~~~~---------g~l~~~ 158 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEK---AQVYALNTSDGTVAWQTKVAG-EALSRPV---VSD---GLVLIHTSN---------GQLQAL 158 (376)
T ss_dssp EEEEETTEEEEEETT---SEEEEEETTTCCEEEEEECSS-CCCSCCE---EET---TEEEEECTT---------SEEEEE
T ss_pred CceEeCCEEEEEcCC---CEEEEEECCCCCEEEEEeCCC-ceEcCCE---EEC---CEEEEEcCC---------CeEEEE
Confidence 345668888876542 478999999886 5432111 1111111 112 255554322 134667
Q ss_pred EcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCC--cEEEeecCCcccc--------CCCc
Q 045071 241 HIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISAN--AWFNIQAPMRRFL--------RSPS 310 (453)
Q Consensus 241 ds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~~~~~--------~~~~ 310 (453)
|..+|. ..|+.....+..........+..+|.+|+-... ..+.+||+.++ .|+.- .+.+... ....
T Consensus 159 d~~tG~--~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~-g~l~~~d~~tG~~~w~~~-~~~~~~~~~~~~~~~~~~~ 234 (376)
T 3q7m_A 159 NEADGA--VKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDN-GRVSAVLMEQGQMIWQQR-ISQATGSTEIDRLSDVDTT 234 (376)
T ss_dssp ETTTCC--EEEEEECCC-----CCCCCCEEETTEEEECCTT-TEEEEEETTTCCEEEEEE-CCC-----------CCCCC
T ss_pred ECCCCc--EEEEEeCCCCceeecCCCCcEEECCEEEEEcCC-CEEEEEECCCCcEEEEEe-cccCCCCcccccccccCCC
Confidence 777654 568764322211011113456678998886544 68999999875 46543 2221100 1112
Q ss_pred eeeeCCeEEEEEEEeccCCCCCCcEEEEEeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCe
Q 045071 311 LLDSNGKLILVAAVEKSKLNVPKSLRLWSLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDK 388 (453)
Q Consensus 311 lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~ 388 (453)
.+..++.||+.+. . . .++.+|.. ...|+.- .+. .......++.||+... .+.
T Consensus 235 p~~~~~~v~~~~~--~-g-------~l~~~d~~tG~~~w~~~--~~~-------------~~~~~~~~~~l~~~~~-~g~ 288 (376)
T 3q7m_A 235 PVVVNGVVFALAY--N-G-------NLTALDLRSGQIMWKRE--LGS-------------VNDFIVDGNRIYLVDQ-NDR 288 (376)
T ss_dssp CEEETTEEEEECT--T-S-------CEEEEETTTCCEEEEEC--CCC-------------EEEEEEETTEEEEEET-TCC
T ss_pred cEEECCEEEEEec--C-c-------EEEEEECCCCcEEeecc--CCC-------------CCCceEECCEEEEEcC-CCe
Confidence 3345788886431 1 1 45556654 3346531 111 1123345889998754 578
Q ss_pred EEEEECCCCceEE
Q 045071 389 ALLFDLCMKSWQW 401 (453)
Q Consensus 389 v~~Yd~~~~~W~~ 401 (453)
+.+||.++.+-.|
T Consensus 289 l~~~d~~tG~~~w 301 (376)
T 3q7m_A 289 VMALTIDGGVTLW 301 (376)
T ss_dssp EEEEETTTCCEEE
T ss_pred EEEEECCCCcEEE
Confidence 9999998876333
No 39
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.57 E-value=3.1 Score=39.17 Aligned_cols=196 Identities=12% Similarity=0.109 Sum_probs=96.4
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccc--eecCCCCCCC-----CCcceEEEEEcCCceEEEEEccCCCCccccccccee
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGS--LSQLPPTLRP-----RLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSE 238 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~--w~~LP~~~~~-----r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~e 238 (453)
..+|.|++... ...++.+|+.|++ |+.-...... ..........+. -+|++...+ -...
T Consensus 51 v~~~~v~~~~~---~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~v~~~~---------g~l~ 116 (376)
T 3q7m_A 51 LADNVVYAADR---AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG--GHVYIGSEK---------AQVY 116 (376)
T ss_dssp EETTEEEEECT---TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET--TEEEEEETT---------SEEE
T ss_pred EECCEEEEEcC---CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC--CEEEEEcCC---------CEEE
Confidence 35677776543 2378889998876 5432211100 011111222222 255654332 1346
Q ss_pred EEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCCc--EEEeecCCccc--cCCCceeee
Q 045071 239 SFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANA--WFNIQAPMRRF--LRSPSLLDS 314 (453)
Q Consensus 239 vyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~~--W~~i~~p~~~~--~~~~~lv~~ 314 (453)
.+|.++|. -.|+....-. . ....++.+|.+|+.... ..|.+||.++++ |+.- .+.+.. ......+..
T Consensus 117 a~d~~tG~--~~W~~~~~~~----~-~~~p~~~~~~v~v~~~~-g~l~~~d~~tG~~~W~~~-~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 117 ALNTSDGT--VAWQTKVAGE----A-LSRPVVSDGLVLIHTSN-GQLQALNEADGAVKWTVN-LDMPSLSLRGESAPTTA 187 (376)
T ss_dssp EEETTTCC--EEEEEECSSC----C-CSCCEEETTEEEEECTT-SEEEEEETTTCCEEEEEE-CCC-----CCCCCCEEE
T ss_pred EEECCCCC--EEEEEeCCCc----e-EcCCEEECCEEEEEcCC-CeEEEEECCCCcEEEEEe-CCCCceeecCCCCcEEE
Confidence 67777754 5687632211 1 13357789999987654 689999998764 7653 222111 111223344
Q ss_pred CCeEEEEEEEeccCCCCCCcEEEEEeecC--CCCeEEEeecCHHH--HHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEE
Q 045071 315 NGKLILVAAVEKSKLNVPKSLRLWSLQAC--GTLWAEIERMPQQL--YAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKAL 390 (453)
Q Consensus 315 ~g~L~vv~~~~~~~~~~~~~i~vw~ld~~--~~~W~~v~~mp~~~--~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~ 390 (453)
+|.+++ +. .. . .|+.++.. ...|+.-...|... ...+... ....+..++.||+... .+.+.
T Consensus 188 ~~~v~~-g~-~~-g-------~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~----~~~p~~~~~~v~~~~~-~g~l~ 252 (376)
T 3q7m_A 188 FGAAVV-GG-DN-G-------RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDV----DTTPVVVNGVVFALAY-NGNLT 252 (376)
T ss_dssp TTEEEE-CC-TT-T-------EEEEEETTTCCEEEEEECCC-----------CC----CCCCEEETTEEEEECT-TSCEE
T ss_pred CCEEEE-Ec-CC-C-------EEEEEECCCCcEEEEEecccCCCCccccccccc----CCCcEEECCEEEEEec-CcEEE
Confidence 677665 21 11 1 45555653 34565432222110 0000000 0011234788888643 57899
Q ss_pred EEECCCCce
Q 045071 391 LFDLCMKSW 399 (453)
Q Consensus 391 ~Yd~~~~~W 399 (453)
++|.++.+-
T Consensus 253 ~~d~~tG~~ 261 (376)
T 3q7m_A 253 ALDLRSGQI 261 (376)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCcE
Confidence 999987753
No 40
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.52 E-value=2.5 Score=37.85 Aligned_cols=211 Identities=8% Similarity=0.027 Sum_probs=101.3
Q ss_pred eeeeCCCCCeEeccCCCCCCCC-eeeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceE
Q 045071 140 YLFDPHELSWYRISFALVPSEF-SPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVD 218 (453)
Q Consensus 140 ~~fdp~~~~w~~l~l~~lp~~~-~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~yk 218 (453)
..||+. .+...+.++...... .+....+|.+++.... ...++++|+ +++......... .....++..++.. +
T Consensus 81 ~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~d~-~g~~~~~~~~~~--~~~~~~i~~~~~g-~ 153 (299)
T 2z2n_A 81 GRITKK-GIIKEYTLPNPDSAPYGITEGPNGDIWFTEMN--GNRIGRITD-DGKIREYELPNK--GSYPSFITLGSDN-A 153 (299)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT--TTEEEEECT-TCCEEEEECSST--TCCEEEEEECTTS-C
T ss_pred EEECCC-CcEEEEeCCCcCCCceeeEECCCCCEEEEecC--CceEEEECC-CCCEEEecCCCC--CCCCceEEEcCCC-C
Confidence 456664 444444433111112 2333446777766432 237889999 766554322111 1122356666544 4
Q ss_pred EEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEE
Q 045071 219 VTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 219 vv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~ 296 (453)
+++.... .....+|+. + +...... .+. .......+.+ +|.+|+.......|..||+ ++++.
T Consensus 154 l~v~~~~--------~~~i~~~~~-~----g~~~~~~-~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 216 (299)
T 2z2n_A 154 LWFTENQ--------NNAIGRITE-S----GDITEFK-IPT--PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT 216 (299)
T ss_dssp EEEEETT--------TTEEEEECT-T----CCEEEEE-CSS--TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred EEEEeCC--------CCEEEEEcC-C----CcEEEee-CCC--CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE
Confidence 5554321 112355655 4 3443321 111 0010112333 5788888765578999999 77776
Q ss_pred EeecCCccccCCC-ceee-eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEE-EE
Q 045071 297 NIQAPMRRFLRSP-SLLD-SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFD-TI 373 (453)
Q Consensus 297 ~i~~p~~~~~~~~-~lv~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~-~~ 373 (453)
.+..+.. ...+ .++. -+|+|++... ... .|+.++. .+....+ .++.. ...... ++
T Consensus 217 ~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~~~--------~i~~~d~-~g~~~~~-~~~~~---------~~~~~~i~~ 274 (299)
T 2z2n_A 217 EFKIPTP--NARPHAITAGAGIDLWFTEW-GAN--------KIGRLTS-NNIIEEY-PIQIK---------SAEPHGICF 274 (299)
T ss_dssp EEECSST--TCCEEEEEECSTTCEEEEET-TTT--------EEEEEET-TTEEEEE-ECSSS---------SCCEEEEEE
T ss_pred EEECCCC--CCCceeEEECCCCCEEEecc-CCc--------eEEEECC-CCceEEE-eCCCC---------CCccceEEe
Confidence 6543321 1222 2332 4688887441 111 5666676 3333322 12210 011111 23
Q ss_pred eeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 374 GHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 374 ~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
.++.||+... .+.+..||+++++
T Consensus 275 -~~g~l~v~~~-~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 275 -DGETIWFAME-CDKIGKLTLIKDN 297 (299)
T ss_dssp -CSSCEEEEET-TTEEEEEEEC---
T ss_pred -cCCCEEEEec-CCcEEEEEcCccc
Confidence 5677888754 5789999998765
No 41
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.29 E-value=1.9 Score=40.72 Aligned_cols=190 Identities=17% Similarity=0.178 Sum_probs=91.6
Q ss_pred ecCc-eEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc
Q 045071 166 SSGG-LVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA 244 (453)
Q Consensus 166 s~~G-ll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~ 244 (453)
+.+| .+++.+.. ...+.++|..+++....-.... ...++.+.+++-.+++.+... ....+||..+
T Consensus 40 s~dg~~l~~~~~~--d~~i~v~d~~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~~~~~--------~~v~v~d~~~ 105 (391)
T 1l0q_A 40 SPDGTKVYVANAH--SNDVSIIDTATNNVIATVPAGS----SPQGVAVSPDGKQVYVTNMAS--------STLSVIDTTS 105 (391)
T ss_dssp CTTSSEEEEEEGG--GTEEEEEETTTTEEEEEEECSS----SEEEEEECTTSSEEEEEETTT--------TEEEEEETTT
T ss_pred CCCCCEEEEECCC--CCeEEEEECCCCeEEEEEECCC----CccceEECCCCCEEEEEECCC--------CEEEEEECCC
Confidence 3344 45555432 2378899998877543222211 233555655554566655421 2457888776
Q ss_pred CCCCCcccccCCCCCcccCCCCCeEEE-CC-EEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCcee--eeCCeEEE
Q 045071 245 GGFFSLWGTTSSLPRLCSLESGRMVQV-NG-KFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLL--DSNGKLIL 320 (453)
Q Consensus 245 ~~~~~~W~~~~~~p~~~~~~~~~~v~~-~G-~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv--~~~g~L~v 320 (453)
+.-...-.... .. ....+. +| .+|+.......|..||+.+.+..... +.. ..+.-+ .-+|+.++
T Consensus 106 ----~~~~~~~~~~~--~~--~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~---~~~~~~~~~~dg~~l~ 173 (391)
T 1l0q_A 106 ----NTVAGTVKTGK--SP--LGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTV-SVG---RSPKGIAVTPDGTKVY 173 (391)
T ss_dssp ----TEEEEEEECSS--SE--EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-ECC---SSEEEEEECTTSSEEE
T ss_pred ----CeEEEEEeCCC--Cc--ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE-ecC---CCcceEEECCCCCEEE
Confidence 33222111111 00 112222 34 46666665678999999988764431 111 111122 22454443
Q ss_pred EEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEc--CCCeEEEEECCCCc
Q 045071 321 VAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIR--GSDKALLFDLCMKS 398 (453)
Q Consensus 321 v~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~--~~~~v~~Yd~~~~~ 398 (453)
+....+ ..+.+|.+. +.+ .+..++.. .....+.....|+.+++... ..+.+.+||+.+.+
T Consensus 174 ~~~~~~------~~v~~~d~~--~~~--~~~~~~~~--------~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 174 VANFDS------MSISVIDTV--TNS--VIDTVKVE--------AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEETTT------TEEEEEETT--TTE--EEEEEECS--------SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred EEeCCC------CEEEEEECC--CCe--EEEEEecC--------CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 333221 246677544 332 22222210 00011122234667777654 46789999988765
Q ss_pred e
Q 045071 399 W 399 (453)
Q Consensus 399 W 399 (453)
.
T Consensus 236 ~ 236 (391)
T 1l0q_A 236 I 236 (391)
T ss_dssp E
T ss_pred E
Confidence 3
No 42
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.28 E-value=0.24 Score=44.97 Aligned_cols=108 Identities=8% Similarity=-0.010 Sum_probs=70.1
Q ss_pred eEEECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCe
Q 045071 268 MVQVNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLW 347 (453)
Q Consensus 268 ~v~~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W 347 (453)
..+.++.||..++....|..+|+++++-..-..+ .....-.+...+++||++.. +.. .+|++|. ..-
T Consensus 60 L~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~--~~~FgeGit~~g~~Ly~ltw--~~~-------~v~V~D~--~Tl 126 (268)
T 3nok_A 60 LVFHQGHFFESTGHQGTLRQLSLESAQPVWMERL--GNIFAEGLASDGERLYQLTW--TEG-------LLFTWSG--MPP 126 (268)
T ss_dssp EEEETTEEEEEETTTTEEEECCSSCSSCSEEEEC--TTCCEEEEEECSSCEEEEES--SSC-------EEEEEET--TTT
T ss_pred EEEECCEEEEEcCCCCEEEEEECCCCcEEeEECC--CCcceeEEEEeCCEEEEEEc--cCC-------EEEEEEC--CcC
Confidence 3556789999887656799999999765332222 11111235567899998753 221 7888886 445
Q ss_pred EEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 348 AEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 348 ~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
+.+.+++-. ..++.+...++.+|+... .+++.++|+++.+-
T Consensus 127 ~~~~ti~~~----------~eGwGLt~Dg~~L~vSdG-s~~l~~iDp~T~~v 167 (268)
T 3nok_A 127 QRERTTRYS----------GEGWGLCYWNGKLVRSDG-GTMLTFHEPDGFAL 167 (268)
T ss_dssp EEEEEEECS----------SCCCCEEEETTEEEEECS-SSEEEEECTTTCCE
T ss_pred cEEEEEeCC----------CceeEEecCCCEEEEECC-CCEEEEEcCCCCeE
Confidence 556666531 123445567888988764 78999999998653
No 43
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.27 E-value=0.9 Score=41.78 Aligned_cols=117 Identities=11% Similarity=0.157 Sum_probs=60.7
Q ss_pred EEEEEecCCCEEEEEECCC-CcEEEee---cCCccccCCCc-ee-eeCCe-EEEEEEEeccCCCCCCcEEEEEeecCCCC
Q 045071 274 KFYCMNYSPFSVLAYDISA-NAWFNIQ---APMRRFLRSPS-LL-DSNGK-LILVAAVEKSKLNVPKSLRLWSLQACGTL 346 (453)
Q Consensus 274 ~lY~~~~~~~~i~~yD~~~-~~W~~i~---~p~~~~~~~~~-lv-~~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~~ 346 (453)
.+|+.......|..||+.+ ++...+. ...+.. ..+. +. .-+|+ |++++. . ...+.+|.++..+..
T Consensus 142 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~pdg~~l~~~~~-~------~~~i~~~~~~~~~g~ 213 (343)
T 1ri6_A 142 TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG-AGPRHMVFHPNEQYAYCVNE-L------NSSVDVWELKDPHGN 213 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT-CCEEEEEECTTSSEEEEEET-T------TTEEEEEESSCTTSC
T ss_pred EEEEecCCCCEEEEEEecCCCceeeecccccccCCC-CCcceEEECCCCCEEEEEeC-C------CCEEEEEEecCCCCc
Confidence 5776663446899999987 6665332 111111 1122 22 23565 544331 1 236788988765555
Q ss_pred eEEE---eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECC--CCceEEc
Q 045071 347 WAEI---ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLC--MKSWQWI 402 (453)
Q Consensus 347 W~~v---~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~--~~~W~~l 402 (453)
++.+ ..++.. +........+.....|+.+|+.....+.+.+||+. +++++.+
T Consensus 214 ~~~~~~~~~~~~~----~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~ 270 (343)
T 1ri6_A 214 IECVQTLDMMPEN----FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKE 270 (343)
T ss_dssp CEEEEEEECSCTT----CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEE
T ss_pred EEEEeeccccCcc----ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEe
Confidence 5433 333331 00000000122223466888877667899999998 4555554
No 44
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.25 E-value=3.3 Score=38.12 Aligned_cols=225 Identities=11% Similarity=0.008 Sum_probs=107.2
Q ss_pred ceeeeCCCCCeE-eccCCCCCCCCeeeeecCceEEEEecCCCCeeEEEEcCccccee-cCCCCC--CCC---CcceEEEE
Q 045071 139 GYLFDPHELSWY-RISFALVPSEFSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLS-QLPPTL--RPR---LFPSIGLK 211 (453)
Q Consensus 139 ~~~fdp~~~~w~-~l~l~~lp~~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~-~LP~~~--~~r---~~~~~~~~ 211 (453)
...+|+.+.+.. .++....|. ...+...+..+++..... ..+.++|+.+++.. .++... .+. .....++.
T Consensus 71 v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~--~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (353)
T 3vgz_A 71 VYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVN--SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELV 147 (353)
T ss_dssp EEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTT--TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEE
T ss_pred EEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCC--CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEE
Confidence 356777665532 233222222 122334445566655432 47899999888742 222211 110 11123455
Q ss_pred EcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEE-ECC-EEEEEecCCCEEEEEE
Q 045071 212 VTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQ-VNG-KFYCMNYSPFSVLAYD 289 (453)
Q Consensus 212 ~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~-~~G-~lY~~~~~~~~i~~yD 289 (453)
+++++-++++..... .....+||..++. -.+. +..... . ....++ -+| .+|+... ...|..||
T Consensus 148 ~s~dg~~l~~~~~~~-------~~~i~~~d~~~~~--~~~~-~~~~~~--~--~~~~~~s~dg~~l~~~~~-~~~i~~~d 212 (353)
T 3vgz_A 148 ADDATNTVYISGIGK-------ESVIWVVDGGNIK--LKTA-IQNTGK--M--STGLALDSEGKRLYTTNA-DGELITID 212 (353)
T ss_dssp EETTTTEEEEEEESS-------SCEEEEEETTTTE--EEEE-ECCCCT--T--CCCCEEETTTTEEEEECT-TSEEEEEE
T ss_pred ECCCCCEEEEEecCC-------CceEEEEcCCCCc--eEEE-ecCCCC--c--cceEEECCCCCEEEEEcC-CCeEEEEE
Confidence 655544566654211 1234677776521 1111 110110 0 112233 244 4666554 46899999
Q ss_pred CCCCcEEE-eecCCccccCCC-cee-eeCCe-EEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhccc
Q 045071 290 ISANAWFN-IQAPMRRFLRSP-SLL-DSNGK-LILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIE 365 (453)
Q Consensus 290 ~~~~~W~~-i~~p~~~~~~~~-~lv-~~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~ 365 (453)
+.+.+-.. +..+.......+ .++ .-+|+ ||+.+ ... . .|+.+|..+.+.......+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~-~~~------~--~v~~~d~~~~~~~~~~~~~~---------- 273 (353)
T 3vgz_A 213 TADNKILSRKKLLDDGKEHFFINISLDTARQRAFITD-SKA------A--EVLVVDTRNGNILAKVAAPE---------- 273 (353)
T ss_dssp TTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE-SSS------S--EEEEEETTTCCEEEEEECSS----------
T ss_pred CCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEe-CCC------C--EEEEEECCCCcEEEEEEcCC----------
Confidence 99876533 222111111111 122 22454 55433 111 2 45555654454433323322
Q ss_pred CCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 366 AGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 366 ~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
...+.....|+.+|+.....+.+.+||..+.+...
T Consensus 274 -~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 274 -SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp -CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred -CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEE
Confidence 12334445678899987767899999998876543
No 45
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=94.20 E-value=2.1 Score=40.29 Aligned_cols=187 Identities=13% Similarity=0.132 Sum_probs=90.8
Q ss_pred eEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCC
Q 045071 170 LVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFS 249 (453)
Q Consensus 170 ll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~ 249 (453)
.+++.+... ..+.++|..+++....-... ....++.+.+++-.+++.+.. .....+||..+ +
T Consensus 3 ~l~vs~~~d--~~v~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~--------d~~i~v~d~~~----~ 64 (391)
T 1l0q_A 3 FAYIANSES--DNISVIDVTSNKVTATIPVG----SNPMGAVISPDGTKVYVANAH--------SNDVSIIDTAT----N 64 (391)
T ss_dssp EEEEEETTT--TEEEEEETTTTEEEEEEECS----SSEEEEEECTTSSEEEEEEGG--------GTEEEEEETTT----T
T ss_pred EEEEEcCCC--CEEEEEECCCCeEEEEeecC----CCcceEEECCCCCEEEEECCC--------CCeEEEEECCC----C
Confidence 455554332 46888888877654321111 112355665555566665532 12457788766 3
Q ss_pred cccccCCCCCcccCCCCCeEEE-CC-EEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEe
Q 045071 250 LWGTTSSLPRLCSLESGRMVQV-NG-KFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVE 325 (453)
Q Consensus 250 ~W~~~~~~p~~~~~~~~~~v~~-~G-~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~ 325 (453)
.-...-..+. .. ....+. +| .+|+.......|..||+.+++...... .. ..+.-+. -+|+.+++....
T Consensus 65 ~~~~~~~~~~--~v--~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~---~~~~~~~~s~dg~~l~~~~~~ 136 (391)
T 1l0q_A 65 NVIATVPAGS--SP--QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-TG---KSPLGLALSPDGKKLYVTNNG 136 (391)
T ss_dssp EEEEEEECSS--SE--EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CS---SSEEEEEECTTSSEEEEEETT
T ss_pred eEEEEEECCC--Cc--cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe-CC---CCcceEEECCCCCEEEEEeCC
Confidence 3222111111 00 112222 34 466666555789999999886543311 11 1111222 345544333321
Q ss_pred ccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 326 KSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 326 ~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
+ ..+.+|.++ +.+......... ....+.....++.+++.....+.+.+||+.+.+..
T Consensus 137 ~------~~v~~~d~~--~~~~~~~~~~~~----------~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~ 193 (391)
T 1l0q_A 137 D------KTVSVINTV--TKAVINTVSVGR----------SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI 193 (391)
T ss_dssp T------TEEEEEETT--TTEEEEEEECCS----------SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred C------CEEEEEECC--CCcEEEEEecCC----------CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE
Confidence 1 256666543 343332222111 00112222346678777666788999999887543
No 46
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.13 E-value=3.4 Score=37.79 Aligned_cols=195 Identities=9% Similarity=0.111 Sum_probs=94.5
Q ss_pred eEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccc-eeEEEcccCCCCCccccc--CCCC
Q 045071 182 TLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLS-SESFHIDAGGFFSLWGTT--SSLP 258 (453)
Q Consensus 182 ~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~-~evyds~~~~~~~~W~~~--~~~p 258 (453)
.+.++|+.+++....-+.. . ...++...+++-.+++.+... .. ..+|+.... +.-... ..++
T Consensus 109 ~i~v~d~~~~~~~~~~~~~--~--~~~~~~~spdg~~l~~~~~~~--------~~~i~~~~~~~~---g~~~~~~~~~~~ 173 (331)
T 3u4y_A 109 NMQSYSFLKNKFISTIPIP--Y--DAVGIAISPNGNGLILIDRSS--------ANTVRRFKIDAD---GVLFDTGQEFIS 173 (331)
T ss_dssp EEEEEETTTTEEEEEEECC--T--TEEEEEECTTSSCEEEEEETT--------TTEEEEEEECTT---CCEEEEEEEEEC
T ss_pred cEEEEECCCCCeEEEEECC--C--CccceEECCCCCEEEEEecCC--------CceEEEEEECCC---CcEeecCCcccc
Confidence 7999999887754321111 1 113556666543466554321 12 456665431 111000 0001
Q ss_pred CcccCCCCCeEE-ECCE-EEEEecCCCEEEEEECCCCcE----EEeecCCccccCCCce-eeeCCe-EEEEEEEeccCCC
Q 045071 259 RLCSLESGRMVQ-VNGK-FYCMNYSPFSVLAYDISANAW----FNIQAPMRRFLRSPSL-LDSNGK-LILVAAVEKSKLN 330 (453)
Q Consensus 259 ~~~~~~~~~~v~-~~G~-lY~~~~~~~~i~~yD~~~~~W----~~i~~p~~~~~~~~~l-v~~~g~-L~vv~~~~~~~~~ 330 (453)
. .......++ -+|. +|+.......|..||+.+.+. ..+... . ....+ +.-+|+ ||+... ..
T Consensus 174 ~--~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~--~~~~~~~spdg~~l~v~~~-~~---- 242 (331)
T 3u4y_A 174 G--GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN--N--LPGTIVVSRDGSTVYVLTE-ST---- 242 (331)
T ss_dssp S--SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS--S--CCCCEEECTTSSEEEEECS-SE----
T ss_pred C--CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC--C--CCceEEECCCCCEEEEEEc-CC----
Confidence 0 000011122 2464 777776567899999988764 223221 1 11122 233566 554332 11
Q ss_pred CCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceEEcCCCC
Q 045071 331 VPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQWIPRCP 406 (453)
Q Consensus 331 ~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~l~~~p 406 (453)
. .|+.++..+++.+.+..++..+...-........+.....|..+|+.....+.+.+||++++.-..+....
T Consensus 243 --~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~ 314 (331)
T 3u4y_A 243 --V--DVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKVVGYVAGIE 314 (331)
T ss_dssp --E--EEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEEEECTTCC
T ss_pred --C--EEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcccceeccc
Confidence 1 34445555565554544432100000000000123444567889888776789999999998877765443
No 47
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.65 E-value=0.38 Score=43.55 Aligned_cols=109 Identities=11% Similarity=0.101 Sum_probs=68.3
Q ss_pred eEEECCEEEEEecC--CCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 268 MVQVNGKFYCMNYS--PFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 268 ~v~~~G~lY~~~~~--~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
..+.+|.+|.-++. ...|..+|+++++-..- .+++.....-.+...+++||++...+ . .+|++|..+
T Consensus 48 L~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~-~~l~~~~FgeGit~~g~~ly~ltw~~--~-------~v~v~D~~t- 116 (262)
T 3nol_A 48 FFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQ-IELGKRYFGEGISDWKDKIVGLTWKN--G-------LGFVWNIRN- 116 (262)
T ss_dssp EEEETTEEEEEEEETTEEEEEEECTTTCCEEEE-EECCTTCCEEEEEEETTEEEEEESSS--S-------EEEEEETTT-
T ss_pred EEEECCEEEEECCCCCCceEEEEECCCCcEEEE-EecCCccceeEEEEeCCEEEEEEeeC--C-------EEEEEECcc-
Confidence 35568899987654 24799999999876432 22222111123556789999875422 1 788888644
Q ss_pred CeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 346 LWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 346 ~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
-+.+.+++-. ..++.+...++.+|+... .+++.++|+++.+-
T Consensus 117 -~~~~~ti~~~----------~eG~glt~dg~~L~~SdG-s~~i~~iDp~T~~v 158 (262)
T 3nol_A 117 -LRQVRSFNYD----------GEGWGLTHNDQYLIMSDG-TPVLRFLDPESLTP 158 (262)
T ss_dssp -CCEEEEEECS----------SCCCCEEECSSCEEECCS-SSEEEEECTTTCSE
T ss_pred -CcEEEEEECC----------CCceEEecCCCEEEEECC-CCeEEEEcCCCCeE
Confidence 4455555431 123444556778888754 68899999998543
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=93.61 E-value=3.8 Score=37.99 Aligned_cols=139 Identities=5% Similarity=0.067 Sum_probs=70.2
Q ss_pred ceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE-C--CEEEEEecCCCEEEEEECCCCcE-EEeecCCccccCCCce
Q 045071 236 SSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV-N--GKFYCMNYSPFSVLAYDISANAW-FNIQAPMRRFLRSPSL 311 (453)
Q Consensus 236 ~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~-~--G~lY~~~~~~~~i~~yD~~~~~W-~~i~~p~~~~~~~~~l 311 (453)
.+.+|+..+ +.|..+..+..... .-....+. + |.+.+.+.....|..||+.+..- ...... .......-
T Consensus 80 ~v~iwd~~~----~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~--~~~~~v~~ 152 (379)
T 3jrp_A 80 KVLIWKEEN----GRWSQIAVHAVHSA-SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID--AHAIGVNS 152 (379)
T ss_dssp CEEEEEEET----TEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE--CCTTCEEE
T ss_pred EEEEEEcCC----CceeEeeeecCCCc-ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec--CCCCceEE
Confidence 457888887 66655433221000 00111222 2 44444444446899999987632 111110 00011111
Q ss_pred eee---------------CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe--
Q 045071 312 LDS---------------NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG-- 374 (453)
Q Consensus 312 v~~---------------~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~-- 374 (453)
+.. ++++++++... ..+.||.+......|..+..+... ...+.++.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~h----------~~~v~~~~~s 215 (379)
T 3jrp_A 153 ASWAPATIEEDGEHNGTKESRKFVTGGAD-------NLVKIWKYNSDAQTYVLESTLEGH----------SDWVRDVAWS 215 (379)
T ss_dssp EEECCCC----------CTTCEEEEEETT-------SCEEEEEEETTTTEEEEEEEECCC----------SSCEEEEEEC
T ss_pred EEEcCccccccccccCCCCCCEEEEEeCC-------CeEEEEEecCCCcceeeEEEEecc----------cCcEeEEEEC
Confidence 111 46777666422 268999998766667666555420 01233322
Q ss_pred -eC--CEEEEEEcCCCeEEEEECCCCc
Q 045071 375 -HG--EFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 375 -~g--~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
.+ +.+++.....+.+.+||+.+..
T Consensus 216 p~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 216 PTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp CCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred CCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 21 4555555557889999998863
No 49
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=93.50 E-value=3.7 Score=37.19 Aligned_cols=160 Identities=13% Similarity=0.018 Sum_probs=87.4
Q ss_pred EEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEE
Q 045071 208 IGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLA 287 (453)
Q Consensus 208 ~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~ 287 (453)
-|+.+++++ ++|+..+.. ......++|..+ ++=...-.++. .......+..++.+|+++.....+.+
T Consensus 24 ~Gl~~~~dg-~Lyvstg~~------~~s~v~~iD~~t----g~v~~~i~l~~--~~fgeGi~~~g~~lyv~t~~~~~v~v 90 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGLY------GRSSVRQVALQT----GKVENIHKMDD--SYFGEGLTLLNEKLYQVVWLKNIGFI 90 (266)
T ss_dssp EEEEECSTT-EEEEEECST------TTCEEEEEETTT----CCEEEEEECCT--TCCEEEEEEETTEEEEEETTCSEEEE
T ss_pred ccEEEeCCC-eEEEECCCC------CCCEEEEEECCC----CCEEEEEecCC--CcceEEEEEeCCEEEEEEecCCEEEE
Confidence 367776543 677764421 123567888887 33222111221 11112235567899999987789999
Q ss_pred EECCCCcE-EEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccC
Q 045071 288 YDISANAW-FNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEA 366 (453)
Q Consensus 288 yD~~~~~W-~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~ 366 (453)
||.++.+- ..++.+.+ ....+...+++||+.. ..+ .|+.+|..+.+ .+.+++......... .
T Consensus 91 iD~~t~~v~~~i~~g~~---~g~glt~Dg~~l~vs~--gs~--------~l~viD~~t~~--v~~~I~Vg~~~~p~~--~ 153 (266)
T 2iwa_A 91 YDRRTLSNIKNFTHQMK---DGWGLATDGKILYGSD--GTS--------ILYEIDPHTFK--LIKKHNVKYNGHRVI--R 153 (266)
T ss_dssp EETTTTEEEEEEECCSS---SCCEEEECSSSEEEEC--SSS--------EEEEECTTTCC--EEEEEECEETTEECC--C
T ss_pred EECCCCcEEEEEECCCC---CeEEEEECCCEEEEEC--CCC--------eEEEEECCCCc--EEEEEEECCCCcccc--c
Confidence 99998643 33433312 1223444456777533 221 78888975543 333443200000000 0
Q ss_pred CCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 367 GNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 367 ~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
...+.+. ++.+|+.....+.|.+-|+.+.+-
T Consensus 154 ~nele~~--dg~lyvn~~~~~~V~vID~~tg~V 184 (266)
T 2iwa_A 154 LNELEYI--NGEVWANIWQTDCIARISAKDGTL 184 (266)
T ss_dssp EEEEEEE--TTEEEEEETTSSEEEEEETTTCCE
T ss_pred ceeEEEE--CCEEEEecCCCCeEEEEECCCCcE
Confidence 0123333 678998876678999999998764
No 50
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=92.97 E-value=0.72 Score=41.92 Aligned_cols=104 Identities=15% Similarity=0.059 Sum_probs=64.6
Q ss_pred CEEEEEecC--CCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 273 GKFYCMNYS--PFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 273 G~lY~~~~~--~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
|.+|..++. ...|.++|+++++-..- .+.+.......+...+++||+... ... .++++|.. ..+.+
T Consensus 32 g~Lyvstg~~~~s~v~~iD~~tg~v~~~-i~l~~~~fgeGi~~~g~~lyv~t~--~~~-------~v~viD~~--t~~v~ 99 (266)
T 2iwa_A 32 DTLFESTGLYGRSSVRQVALQTGKVENI-HKMDDSYFGEGLTLLNEKLYQVVW--LKN-------IGFIYDRR--TLSNI 99 (266)
T ss_dssp TEEEEEECSTTTCEEEEEETTTCCEEEE-EECCTTCCEEEEEEETTEEEEEET--TCS-------EEEEEETT--TTEEE
T ss_pred CeEEEECCCCCCCEEEEEECCCCCEEEE-EecCCCcceEEEEEeCCEEEEEEe--cCC-------EEEEEECC--CCcEE
Confidence 789988642 46899999999875432 222221111234556789998653 221 67888864 45556
Q ss_pred eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
.+++... ..++.....|+.+|+.. ..+.+.+.|+++.+
T Consensus 100 ~~i~~g~---------~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~ 137 (266)
T 2iwa_A 100 KNFTHQM---------KDGWGLATDGKILYGSD-GTSILYEIDPHTFK 137 (266)
T ss_dssp EEEECCS---------SSCCEEEECSSSEEEEC-SSSEEEEECTTTCC
T ss_pred EEEECCC---------CCeEEEEECCCEEEEEC-CCCeEEEEECCCCc
Confidence 6664210 12334444678888876 47899999998865
No 51
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=92.80 E-value=6.4 Score=36.96 Aligned_cols=187 Identities=13% Similarity=0.058 Sum_probs=100.2
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
..+|.|++.... ...++++++.+.....+..... ..-.|+.++...-+||++... ....++++.+.
T Consensus 82 ~~~~~ly~~D~~--~~~I~r~~~~g~~~~~~~~~~~---~~p~glavd~~~g~ly~~d~~--------~~~I~~~~~dG- 147 (349)
T 3v64_C 82 HRRELVFWSDVT--LDRILRANLNGSNVEEVVSTGL---ESPGGLAVDWVHDKLYWTDSG--------TSRIEVANLDG- 147 (349)
T ss_dssp TTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSC---SCCCEEEEETTTTEEEEEETT--------TTEEEEEETTS-
T ss_pred ccccEEEEEecc--CCceEEEecCCCCceEEEeCCC---CCccEEEEecCCCeEEEEcCC--------CCeEEEEcCCC-
Confidence 357888877543 3478888888765443321111 111256666545577776542 12446666654
Q ss_pred CCCCcccccC--CCCCcccCCCCCeEEE--CCEEEEEecCC-CEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCe
Q 045071 246 GFFSLWGTTS--SLPRLCSLESGRMVQV--NGKFYCMNYSP-FSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGK 317 (453)
Q Consensus 246 ~~~~~W~~~~--~~p~~~~~~~~~~v~~--~G~lY~~~~~~-~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~ 317 (453)
..-+.+. .+.. ....++- +|.+||..... ..|..+|++...-+.+-. .....+ .|+. .+++
T Consensus 148 ---~~~~~l~~~~l~~-----P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~---~~~~~PnGla~d~~~~~ 216 (349)
T 3v64_C 148 ---AHRKVLLWQSLEK-----PRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD---THLFWPNGLTIDYAGRR 216 (349)
T ss_dssp ---CSCEEEECTTCSC-----EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCC---SSCSCEEEEEEETTTTE
T ss_pred ---CceEEEEeCCCCC-----cceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEE---CCCCCcceEEEeCCCCE
Confidence 2222211 1111 0223333 68999998765 789999998755443311 112222 2333 4788
Q ss_pred EEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCC
Q 045071 318 LILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 318 L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
||++.. .. . .|+.++.+...-..+.... ...+......++.||+.....++|..+|..+.
T Consensus 217 lY~aD~--~~-----~--~I~~~~~dG~~~~~~~~~~-----------~~~P~giav~~~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 217 MYWVDA--KH-----H--VIERANLDGSHRKAVISQG-----------LPHPFAITVFEDSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEEET--TT-----T--EEEEEETTSCSCEEEECSS-----------CSSEEEEEEETTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEEC--CC-----C--EEEEEeCCCCceEEEEeCC-----------CCCceEEEEECCEEEEecCCCCeEEEEEccCC
Confidence 998653 21 1 5666665432222222211 01233333368899999877889999995544
No 52
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=92.60 E-value=7.7 Score=37.34 Aligned_cols=210 Identities=10% Similarity=0.010 Sum_probs=101.8
Q ss_pred eecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc
Q 045071 165 SSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA 244 (453)
Q Consensus 165 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~ 244 (453)
...+|-|++.... ...+.++|+.+++...+..... .+. +.+++..-.+++...... ....+++...
T Consensus 138 ~d~~g~lyv~d~~--~~~I~~id~~~g~~~~~~~~~~---~~~--ia~~~~g~~l~~~d~~~~-------~~I~~~d~~~ 203 (409)
T 3hrp_A 138 AVGNNTVLAYQRD--DPRVRLISVDDNKVTTVHPGFK---GGK--PAVTKDKQRVYSIGWEGT-------HTVYVYMKAS 203 (409)
T ss_dssp ECSTTEEEEEETT--TTEEEEEETTTTEEEEEEETCC---BCB--CEECTTSSEEEEEBSSTT-------CEEEEEEGGG
T ss_pred EeCCCCEEEEecC--CCcEEEEECCCCEEEEeeccCC---CCc--eeEecCCCcEEEEecCCC-------ceEEEEEcCC
Confidence 3466777776543 2478999998877655432211 112 334444445666554211 1345666654
Q ss_pred CCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEEEeec-CCc-cccCCC--ceeee--CC
Q 045071 245 GGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWFNIQA-PMR-RFLRSP--SLLDS--NG 316 (453)
Q Consensus 245 ~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~i~~-p~~-~~~~~~--~lv~~--~g 316 (453)
+ .....+..............++. +|.||+... ...|..||+.+.....+.. +.. .....+ .++.. +|
T Consensus 204 ~---~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~-~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g 279 (409)
T 3hrp_A 204 G---WAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS-NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS 279 (409)
T ss_dssp T---TCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT-TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT
T ss_pred C---ceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC-CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC
Confidence 1 11122211110000111223333 689999543 4689999999877554411 111 111121 34433 58
Q ss_pred eEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcc-----cCCCcEE-EEeeCCEEEEEEc-CCCeE
Q 045071 317 KLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEI-----EAGNGFD-TIGHGEFIVIVIR-GSDKA 389 (453)
Q Consensus 317 ~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~-----~~~~~~~-~~~~g~~I~l~~~-~~~~v 389 (453)
.||+... .+ . .|++++.+.. ...+..-+.. ..+... ....+.. ++..++.||+... ...+|
T Consensus 280 ~lyv~d~--~~-----~--~I~~~~~~g~-~~~~~g~~~~--~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 280 NFYMSDQ--NL-----S--SVYKITPDGE-CEWFCGSATQ--KTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp EEEEEET--TT-----T--EEEEECTTCC-EEEEEECTTC--CSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred EEEEEeC--CC-----C--EEEEEecCCC-EEEEEeCCCC--CCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 8987542 11 1 6777775433 2222211100 000000 0001111 2222345999987 78899
Q ss_pred EEEECCCCceEEcCC
Q 045071 390 LLFDLCMKSWQWIPR 404 (453)
Q Consensus 390 ~~Yd~~~~~W~~l~~ 404 (453)
..+|+.+.+...+..
T Consensus 348 ~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 348 RKLDILDGYVSTVAG 362 (409)
T ss_dssp EEEETTTTEEEEEEE
T ss_pred EEEECCCCEEEEEeC
Confidence 999987777665543
No 53
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.52 E-value=7.5 Score=37.07 Aligned_cols=188 Identities=13% Similarity=0.016 Sum_probs=97.7
Q ss_pred CceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCC
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGF 247 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~ 247 (453)
.+.|++... ..+..+++.++....+-.. .....++.++...-+||++.... .....++.+.
T Consensus 87 ~~~l~~~~~----~~I~~i~~~~~~~~~~~~~----~~~~~gl~~d~~~~~ly~~D~~~--------~~I~r~~~~g--- 147 (386)
T 3v65_B 87 EPVLLFANR----IDIRQVLPHRSEYTLLLNN----LENAIALDFHHRRELVFWSDVTL--------DRILRANLNG--- 147 (386)
T ss_dssp CCEEEEECB----SCEEEECTTSCCCEEEECS----CSCEEEEEEETTTTEEEEEETTT--------TEEEEEETTS---
T ss_pred cceeEeecC----ccceeeccCCCcEEEEecC----CCccEEEEEecCCCeEEEEeCCC--------CcEEEEecCC---
Confidence 455555432 2567777776655433221 11245777776556788775421 2345566555
Q ss_pred CCcccccCCCCCcccCCCCCeEE--ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEE
Q 045071 248 FSLWGTTSSLPRLCSLESGRMVQ--VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVA 322 (453)
Q Consensus 248 ~~~W~~~~~~p~~~~~~~~~~v~--~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~ 322 (453)
...+.+..... . .....++ .+|.|||.......|.++|++...-..+.. .....+ .++. .+|.||+..
T Consensus 148 -~~~~~~~~~~~--~-~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~---~~l~~P~giavdp~~g~ly~td 220 (386)
T 3v65_B 148 -SNVEEVVSTGL--E-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW---QSLEKPRAIALHPMEGTIYWTD 220 (386)
T ss_dssp -CCEEEEECSSC--S-CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEEC---SSCSCEEEEEEETTTTEEEEEE
T ss_pred -CCcEEEEeCCC--C-CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeec---CCCCCCcEEEEEcCCCeEEEec
Confidence 33333211110 0 1122333 368999998777799999998765433311 111222 2333 368888754
Q ss_pred EEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 323 AVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 323 ~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
... .-+|++++.+...-+.+..-. +. ...++..-..++.||+.....+.|.++|++...
T Consensus 221 ~~~--------~~~I~r~~~dG~~~~~~~~~~------~~---~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 221 WGN--------TPRIEASSMDGSGRRIIADTH------LF---WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 279 (386)
T ss_dssp CSS--------SCEEEEEETTSCSCEEEECSS------CS---CEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS
T ss_pred cCC--------CCEEEEEeCCCCCcEEEEECC------CC---CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe
Confidence 211 116777776433222222100 00 001233222578899987767889999987543
No 54
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=92.33 E-value=5.9 Score=35.38 Aligned_cols=199 Identities=10% Similarity=0.102 Sum_probs=93.3
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCC--CCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcc
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLR--PRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHID 243 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~--~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~ 243 (453)
..+|.+++.... ...+.++|+-.+....++.... .......++.++...-+++++.... .....+|+..
T Consensus 38 ~~~g~l~v~~~~--~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~-------~~~i~~~d~~ 108 (286)
T 1q7f_A 38 NAQNDIIVADTN--NHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP-------THQIQIYNQY 108 (286)
T ss_dssp CTTCCEEEEEGG--GTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG-------GCEEEEECTT
T ss_pred CCCCCEEEEECC--CCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC-------CCEEEEECCC
Confidence 345666665432 2368888887555444443211 1112233555532233566654210 1234666633
Q ss_pred cCCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-cee-eeCCeEE
Q 045071 244 AGGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLL-DSNGKLI 319 (453)
Q Consensus 244 ~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv-~~~g~L~ 319 (453)
. ..-........ .....+.+ +|.+|+.......|..||........+..+ .....+ .++ .-+|+||
T Consensus 109 g----~~~~~~~~~~~----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~--~~~~~p~~i~~~~~g~l~ 178 (286)
T 1q7f_A 109 G----QFVRKFGATIL----QHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCS--KHLEFPNGVVVNDKQEIF 178 (286)
T ss_dssp S----CEEEEECTTTC----SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECT--TTCSSEEEEEECSSSEEE
T ss_pred C----cEEEEecCccC----CCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCC--CccCCcEEEEECCCCCEE
Confidence 2 22121211100 00112333 588888876557899999876655444322 111222 233 2468888
Q ss_pred EEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEE-EEeeCCEEEEEEcCCC-eEEEEECCCC
Q 045071 320 LVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFD-TIGHGEFIVIVIRGSD-KALLFDLCMK 397 (453)
Q Consensus 320 vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~-~~~~g~~I~l~~~~~~-~v~~Yd~~~~ 397 (453)
+.... . . .|+.++... ... ..+... ..+ ..+.. ++..++.||+.....+ .+.+||.+.+
T Consensus 179 v~~~~-~------~--~i~~~~~~g-~~~--~~~~~~--g~~-----~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 179 ISDNR-A------H--CVKVFNYEG-QYL--RQIGGE--GIT-----NYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp EEEGG-G------T--EEEEEETTC-CEE--EEESCT--TTS-----CSEEEEEECTTCCEEEEECSSSCEEEEECTTSC
T ss_pred EEECC-C------C--EEEEEcCCC-CEE--EEEccC--Ccc-----CCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC
Confidence 75421 1 1 444455533 222 222110 000 01222 2223457888766554 8999998766
Q ss_pred ceEEc
Q 045071 398 SWQWI 402 (453)
Q Consensus 398 ~W~~l 402 (453)
....+
T Consensus 240 ~~~~~ 244 (286)
T 1q7f_A 240 LISAL 244 (286)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 54444
No 55
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.28 E-value=5.6 Score=35.02 Aligned_cols=188 Identities=14% Similarity=0.155 Sum_probs=91.8
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
..+|.+++... ...++++|+-++....++... .....++.+++.+ ++++.... .....+|+..+
T Consensus 75 ~~~g~l~v~~~---~~~i~~~d~~~~~~~~~~~~~---~~~p~~i~~~~~g-~l~v~~~~--------~~~i~~~~~~~- 138 (270)
T 1rwi_B 75 DGAGTVYVTDF---NNRVVTLAAGSNNQTVLPFDG---LNYPEGLAVDTQG-AVYVADRG--------NNRVVKLAAGS- 138 (270)
T ss_dssp CTTCCEEEEET---TTEEEEECTTCSCCEECCCCS---CSSEEEEEECTTC-CEEEEEGG--------GTEEEEECTTC-
T ss_pred CCCCCEEEEcC---CCEEEEEeCCCceEeeeecCC---cCCCcceEECCCC-CEEEEECC--------CCEEEEEECCC-
Confidence 34566666653 247899999887655543221 1122356666544 46665431 11234554333
Q ss_pred CCCCcccccCCCCCcccCCCCCeEEE-CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee-eCCeEEEEE
Q 045071 246 GFFSLWGTTSSLPRLCSLESGRMVQV-NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD-SNGKLILVA 322 (453)
Q Consensus 246 ~~~~~W~~~~~~p~~~~~~~~~~v~~-~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~-~~g~L~vv~ 322 (453)
......... .. . .....++- +|.+|+.......|..||..+........ . ....+ .++. -+|.||+..
T Consensus 139 ---~~~~~~~~~-~~-~-~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~--~-~~~~p~~i~~d~~g~l~v~~ 209 (270)
T 1rwi_B 139 ---KTQTVLPFT-GL-N-DPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPF--T-DITAPWGIAVDEAGTVYVTE 209 (270)
T ss_dssp ---CSCEECCCC-SC-C-SCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCC--S-SCCSEEEEEECTTCCEEEEE
T ss_pred ---ceeEeeccc-cC-C-CceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecc--c-CCCCceEEEECCCCCEEEEE
Confidence 222211110 00 0 11222332 58899887655789999998876543211 1 11222 2332 357888754
Q ss_pred EEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEE-EeeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 323 AVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDT-IGHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 323 ~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~-~~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
. .. . .|+.++.....- .. .+.. .+ .....+ +..++.||+.....++|.+|++..++
T Consensus 210 ~--~~-----~--~v~~~~~~~~~~-~~--~~~~---~~-----~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 210 H--NT-----N--QVVKLLAGSTTS-TV--LPFT---GL-----NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp T--TT-----S--CEEEECTTCSCC-EE--CCCC---SC-----SCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred C--CC-----C--cEEEEcCCCCcc-ee--eccC---CC-----CCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 2 11 1 455556543221 11 1100 00 012222 22234688887667889999887654
No 56
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=91.97 E-value=7.8 Score=35.98 Aligned_cols=117 Identities=14% Similarity=0.258 Sum_probs=59.3
Q ss_pred CCE-EEEEecCCCEEEEEECCCCc-------EE------EeecCCccccCCC-ce-eeeCCeEEEEEEEeccCCCCCCcE
Q 045071 272 NGK-FYCMNYSPFSVLAYDISANA-------WF------NIQAPMRRFLRSP-SL-LDSNGKLILVAAVEKSKLNVPKSL 335 (453)
Q Consensus 272 ~G~-lY~~~~~~~~i~~yD~~~~~-------W~------~i~~p~~~~~~~~-~l-v~~~g~L~vv~~~~~~~~~~~~~i 335 (453)
+|+ +|+.......+..||+.... .. ....+.. ..+ .+ +.-+|+.+++.... ...+
T Consensus 165 dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~spdg~~l~v~~~~------~~~v 235 (361)
T 3scy_A 165 DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPG---SGPRHLIFNSDGKFAYLINEI------GGTV 235 (361)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTT---CCEEEEEECTTSSEEEEEETT------TCEE
T ss_pred CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCC---CCCeEEEEcCCCCEEEEEcCC------CCeE
Confidence 564 77776655788888776543 21 1112211 111 22 22356643333211 2357
Q ss_pred EEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-CCeEEEEECC--CCceEEcC
Q 045071 336 RLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-SDKALLFDLC--MKSWQWIP 403 (453)
Q Consensus 336 ~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-~~~v~~Yd~~--~~~W~~l~ 403 (453)
.+|.++ ++.++.+..++... ..+ .....+.....|..||+.... .+.+.+||+. +++++.+.
T Consensus 236 ~v~~~~--~g~~~~~~~~~~~~-~~~---~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~ 300 (361)
T 3scy_A 236 IAFRYA--DGMLDEIQTVAADT-VNA---QGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVG 300 (361)
T ss_dssp EEEEEE--TTEEEEEEEEESCS-SCC---CCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEE
T ss_pred EEEEec--CCceEEeEEEecCC-CCC---CCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEee
Confidence 888887 45555544432100 000 000122223457788888776 6789999885 55665553
No 57
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.75 E-value=3.3 Score=43.26 Aligned_cols=107 Identities=11% Similarity=0.105 Sum_probs=59.0
Q ss_pred CCEEEEEecCC-CEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCe
Q 045071 272 NGKFYCMNYSP-FSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLW 347 (453)
Q Consensus 272 ~G~lY~~~~~~-~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W 347 (453)
+|.|||..... ..|.++++....-..+... .+..+ .|+. .+++||++.. .. . .|++++.....-
T Consensus 507 ~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~---~l~~PnGlavd~~~~~LY~aD~--~~-----~--~I~~~d~dG~~~ 574 (699)
T 1n7d_A 507 HGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE---NIQWPNGITLDLLSGRLYWVDS--KL-----H--SISSIDVNGGNR 574 (699)
T ss_dssp SSCCEECCCSSSCCEEBCCSSSCCCCEESCS---SCSSCCCEEECTTTCCEEEEET--TT-----T--EEEEECSSSSCC
T ss_pred CCcEEEcccCCCCeEEEEeCCCCCeeEEEeC---CCCCccEEEEeccCCEEEEEec--CC-----C--eEEEEccCCCce
Confidence 58899987543 5788888876543333111 11222 2333 3588998653 21 1 566666543333
Q ss_pred EEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 348 AEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 348 ~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
..+...+.. + ..++.....++.||+.....++|.++|..+.+-
T Consensus 575 ~~~~~~~~~----~-----~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 575 KTILEDEKR----L-----AHPFSLAVFEDKVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp EEECCCSSS----C-----SSCCCCEEETTEEEEECSTTTCEEEEETTTEEE
T ss_pred EEEEecCCc----C-----CCceEeEEECCEEEEEeCCCCeEEEEEccCCCc
Confidence 333222110 0 112222335789999876678999999876554
No 58
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=91.66 E-value=6.9 Score=34.74 Aligned_cols=158 Identities=11% Similarity=0.015 Sum_probs=80.6
Q ss_pred EEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEE
Q 045071 208 IGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSV 285 (453)
Q Consensus 208 ~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i 285 (453)
.++.+++..-++|++... .....+|+.+. ..-..+..... . .....++- +|.+|+.......|
T Consensus 39 ~gi~~d~~~~~ly~~d~~--------~~~I~~~~~~g----~~~~~~~~~~~--~-~p~~ia~d~~~~~lyv~d~~~~~I 103 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS--------EPSIGRASLHG----GEPTTIIRQDL--G-SPEGIALDHLGRTIFWTDSQLDRI 103 (267)
T ss_dssp EEEEEETTTTEEEEEETT--------TTEEEEEESSS----CCCEEEECTTC--C-CEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEecCCCEEEEEECC--------CCEEEEEecCC----CCcEEEEECCC--C-CccEEEEEecCCeEEEEECCCCEE
Confidence 366666655567776542 12346677655 22121111000 0 11222332 57999998776799
Q ss_pred EEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhh
Q 045071 286 LAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFA 362 (453)
Q Consensus 286 ~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~ 362 (453)
.++|++...-..+ .+. ....+ .++. .+|+||+....... . .|++++.+...-+.+.... +.
T Consensus 104 ~~~~~~g~~~~~~-~~~--~~~~P~~i~vd~~~g~lyv~~~~~~~-----~--~I~~~~~dg~~~~~~~~~~------~~ 167 (267)
T 1npe_A 104 EVAKMDGTQRRVL-FDT--GLVNPRGIVTDPVRGNLYWTDWNRDN-----P--KIETSHMDGTNRRILAQDN------LG 167 (267)
T ss_dssp EEEETTSCSCEEE-ECS--SCSSEEEEEEETTTTEEEEEECCSSS-----C--EEEEEETTSCCCEEEECTT------CS
T ss_pred EEEEcCCCCEEEE-EEC--CCCCccEEEEeeCCCEEEEEECCCCC-----c--EEEEEecCCCCcEEEEECC------CC
Confidence 9999986543333 111 11222 2332 26889986532111 1 5566555332222222110 00
Q ss_pred cccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 363 EIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 363 ~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
...++.....++.||+.....+.+.++|++...-
T Consensus 168 ---~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 168 ---LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp ---CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred ---CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence 0012222234789999987788999999986543
No 59
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=91.54 E-value=10 Score=36.41 Aligned_cols=190 Identities=10% Similarity=0.063 Sum_probs=96.8
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccc----eecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEE
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGS----LSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFH 241 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~----w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyd 241 (453)
..+|.||+.... ...++.+++-... ...+-. .......|+.++...-+||++... ...+++++
T Consensus 121 ~~~~~lywsD~~--~~~I~~~~~~g~~~~~~~~~~~~---~~~~~p~glavD~~~~~lY~~d~~--------~~~I~~~~ 187 (400)
T 3p5b_L 121 VASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVIS---RDIQAPDGLAVDWIHSNIYWTDSV--------LGTVSVAD 187 (400)
T ss_dssp TTTTEEEEEETT--TTEEEEEEC------CCCEEEEC---SSCSCEEEEEEETTTTEEEEEETT--------TTEEEEEC
T ss_pred eccCceEEEecC--CCeEEEEEcccCCCCCcceEEEe---CCCCCcccEEEEecCCceEEEECC--------CCeEEEEe
Confidence 346888876543 2367777775421 111111 011123467776545577877542 12345666
Q ss_pred cccCCCCCcccccCCCCCcccCCCCCeEEE---CCEEEEEecC-CCEEEEEECCCCcEEEeecCCccccCCC-ceee--e
Q 045071 242 IDAGGFFSLWGTTSSLPRLCSLESGRMVQV---NGKFYCMNYS-PFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--S 314 (453)
Q Consensus 242 s~~~~~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lY~~~~~-~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~ 314 (453)
.+. ..-+.+... .+.....+.+ +|.|||.... ...|..+|++...-..+.. .....+ .|+. .
T Consensus 188 ~~g----~~~~~l~~~----~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~---~~l~~P~glavd~~ 256 (400)
T 3p5b_L 188 TKG----VKRKTLFRE----NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVT---ENIQWPNGITLDLL 256 (400)
T ss_dssp TTT----CSEEEEEEC----SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEEC---SSCSCEEEEEEETT
T ss_pred CCC----CceEEEEeC----CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEE---CCCCceEEEEEEeC
Confidence 554 332222110 0111112333 6899998754 3579999998754433311 111222 2432 3
Q ss_pred CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEEC
Q 045071 315 NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDL 394 (453)
Q Consensus 315 ~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~ 394 (453)
+++||++.. .. . .|+.++.+...-..+..-+.. ...++.....++.||+.....+.|..+|.
T Consensus 257 ~~~lY~aD~--~~-----~--~I~~~d~dG~~~~~~~~~~~~---------l~~P~gl~v~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 257 SGRLYWVDS--KL-----H--SISSIDVNGGNRKTILEDEKR---------LAHPFSLAVFEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp TTEEEEEET--TT-----T--EEEEEETTSCCCEEEEECSST---------TSSEEEEEEETTEEEEEESSSCSEEEEES
T ss_pred CCEEEEEEC--CC-----C--EEEEEeCCCCccEEEEeCCCC---------CCCCEEEEEeCCEEEEecCCCCeEEEEEc
Confidence 688998653 21 1 667766543332333322111 01244444478999998876788999996
Q ss_pred CCC
Q 045071 395 CMK 397 (453)
Q Consensus 395 ~~~ 397 (453)
.+.
T Consensus 319 ~~G 321 (400)
T 3p5b_L 319 LTG 321 (400)
T ss_dssp SSC
T ss_pred CCC
Confidence 554
No 60
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.00 E-value=11 Score=35.82 Aligned_cols=197 Identities=13% Similarity=0.073 Sum_probs=95.0
Q ss_pred CceEEEEecCCCCeeEEEEcCcccceecCCCCCC-CC-CcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLR-PR-LFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~-~r-~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
+|.+++.+... ..+.++|+.+++.....+... .. .....++...++. ++++.+.. .....+|+.++
T Consensus 133 ~~~~~~~~~~~--~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~s~~~--------d~~v~~~d~~~- 200 (433)
T 3bws_A 133 NTRLAIPLLED--EGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHN-ELWVSQMQ--------ANAVHVFDLKT- 200 (433)
T ss_dssp SSEEEEEBTTS--SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGT-EEEEEEGG--------GTEEEEEETTT-
T ss_pred CCeEEEEeCCC--CeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCC-EEEEEECC--------CCEEEEEECCC-
Confidence 67777665432 368999999887654333211 01 1122234443333 45554432 12457788766
Q ss_pred CCCCcccc-cCCCCCcccCCCCCeEEE-C-CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEE
Q 045071 246 GFFSLWGT-TSSLPRLCSLESGRMVQV-N-GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLIL 320 (453)
Q Consensus 246 ~~~~~W~~-~~~~p~~~~~~~~~~v~~-~-G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~v 320 (453)
..-.. +.. .. . ......+. + ..+|+.......|..||+.+++.... .+... .+.-+. -+|+.++
T Consensus 201 ---~~~~~~~~~-~~--~-~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~-~~~~~---~~~~~~~~~~g~~l~ 269 (433)
T 3bws_A 201 ---LAYKATVDL-TG--K-WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK-TDKIG---LPRGLLLSKDGKELY 269 (433)
T ss_dssp ---CCEEEEEEC-SS--S-SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE-CCCCS---EEEEEEECTTSSEEE
T ss_pred ---ceEEEEEcC-CC--C-CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE-ecCCC---CceEEEEcCCCCEEE
Confidence 22211 110 00 0 00112222 3 35666665557899999998765432 22111 112222 2565555
Q ss_pred EEEEeccCCC-CCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 321 VAAVEKSKLN-VPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 321 v~~~~~~~~~-~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
++........ ....+.+|.++ +.+-......+. ....+.....++.+|+.....+.+.+||+.+.+.
T Consensus 270 ~~~~~~~~~~~~dg~i~~~d~~--~~~~~~~~~~~~----------~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~ 337 (433)
T 3bws_A 270 IAQFSASNQESGGGRLGIYSMD--KEKLIDTIGPPG----------NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKV 337 (433)
T ss_dssp EEEEESCTTCSCCEEEEEEETT--TTEEEEEEEEEE----------CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEE
T ss_pred EEECCCCccccCCCeEEEEECC--CCcEEeeccCCC----------CcceEEECCCCCEEEEEecCCCEEEEEECCCCcE
Confidence 5554332111 11245666554 332222111111 0012222334668888876678999999987654
No 61
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=90.88 E-value=4.7 Score=42.31 Aligned_cols=138 Identities=5% Similarity=0.069 Sum_probs=69.2
Q ss_pred ceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE-C--CEEEEEecCCCEEEEEECCCCcEE-EeecCCccccCCCce
Q 045071 236 SSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV-N--GKFYCMNYSPFSVLAYDISANAWF-NIQAPMRRFLRSPSL 311 (453)
Q Consensus 236 ~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~-~--G~lY~~~~~~~~i~~yD~~~~~W~-~i~~p~~~~~~~~~l 311 (453)
.+.+|+..+ +.|.....+..... .-....+. + |.+.+.+.....|..||+.+..-. ..... ........
T Consensus 78 ~I~vwd~~~----~~~~~~~~~~~h~~-~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~--~~~~~v~~ 150 (753)
T 3jro_A 78 KVLIWKEEN----GRWSQIAVHAVHSA-SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID--AHAIGVNS 150 (753)
T ss_dssp CEEEEEEET----TEEEEEEEECCCSS-CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE--CCSSCEEE
T ss_pred eEEEEECCC----CcccccccccCCCC-CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee--cCCCceEE
Confidence 457888887 66655433221000 00111222 2 444444444478999999876211 11000 00011111
Q ss_pred eee---------------CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe--
Q 045071 312 LDS---------------NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG-- 374 (453)
Q Consensus 312 v~~---------------~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~-- 374 (453)
+.. ++++++++... ..+++|.+......+..+..+... ...+.++.
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~d-------g~I~iwd~~~~~~~~~~~~~~~~h----------~~~V~~l~~s 213 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGAD-------NLVKIWKYNSDAQTYVLESTLEGH----------SDWVRDVAWS 213 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEETT-------SCEEEEEEETTTTEEEEEEEECCC----------SSCEEEEEEC
T ss_pred EEecCcccccccccccCCCCCEEEEEECC-------CeEEEEeccCCcccceeeeeecCC----------CCcEEEEEec
Confidence 111 36666665422 368999998766666665555320 11233332
Q ss_pred -eC--CEEEEEEcCCCeEEEEECCCC
Q 045071 375 -HG--EFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 375 -~g--~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
.+ +.+++.+...+.+.+||+.+.
T Consensus 214 p~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 214 PTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp CCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred cCCCCCCEEEEEecCCEEEEecCCCC
Confidence 21 455555555788999999885
No 62
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=90.45 E-value=12 Score=35.17 Aligned_cols=188 Identities=13% Similarity=0.018 Sum_probs=96.7
Q ss_pred CceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCC
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGF 247 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~ 247 (453)
.+.|++... ..+..+++-......+-.- .....++.++....+||++.... .....++.+.
T Consensus 44 ~~~ll~~~~----~~I~~i~~~g~~~~~~~~~----~~~~~~l~~d~~~~~ly~~D~~~--------~~I~r~~~~g--- 104 (349)
T 3v64_C 44 EPVLLFANR----IDIRQVLPHRSEYTLLLNN----LENAIALDFHHRRELVFWSDVTL--------DRILRANLNG--- 104 (349)
T ss_dssp CCEEEEECB----SCEEEECTTSCCEEEEECS----CSCEEEEEEETTTTEEEEEETTT--------TEEEEEETTS---
T ss_pred CceeEeecc----cceEEEeCCCCeeEEeecC----CCceEEEEEeccccEEEEEeccC--------CceEEEecCC---
Confidence 345554432 2466777766555443211 11245777776566788875421 2345566554
Q ss_pred CCcccccCCCCCcccCCCCCeEE--ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEE
Q 045071 248 FSLWGTTSSLPRLCSLESGRMVQ--VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVA 322 (453)
Q Consensus 248 ~~~W~~~~~~p~~~~~~~~~~v~--~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~ 322 (453)
..-+.+..... . .....++ .+|.|||.......|.++|++...-..+... ....+ .++. .+|.||+..
T Consensus 105 -~~~~~~~~~~~--~-~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---~l~~P~~iavdp~~g~ly~td 177 (349)
T 3v64_C 105 -SNVEEVVSTGL--E-SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQ---SLEKPRAIALHPMEGTIYWTD 177 (349)
T ss_dssp -CSCEEEECSSC--S-CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECT---TCSCEEEEEEETTTTEEEEEE
T ss_pred -CCceEEEeCCC--C-CccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeC---CCCCcceEEEecCcCeEEEec
Confidence 33222211100 0 0112233 3689999988778999999987654433211 11222 3333 368888765
Q ss_pred EEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 323 AVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 323 ~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
... .-+|++++.+...-+.+.. .. +. ...++..-..++.||+.....++|.++|++...
T Consensus 178 ~~~--------~~~I~r~~~dG~~~~~~~~--~~----~~---~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 178 WGN--------TPRIEASSMDGSGRRIIAD--TH----LF---WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH 236 (349)
T ss_dssp CSS--------SCEEEEEETTSCSCEESCC--SS----CS---CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred cCC--------CCEEEEEeCCCCCcEEEEE--CC----CC---CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc
Confidence 311 1167777754322222111 10 00 001222222578999987777889999987654
No 63
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.20 E-value=11 Score=34.33 Aligned_cols=189 Identities=11% Similarity=0.041 Sum_probs=93.7
Q ss_pred CceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCC
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGF 247 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~ 247 (453)
.+.+++.... ...+.++|+.+++....-... .... ++.+.+++-.+++++... ....+||..+
T Consensus 9 ~~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~---~~~~-~~~~s~dg~~l~~~~~~~--------~~i~~~d~~~--- 71 (331)
T 3u4y_A 9 SNFGIVVEQH--LRRISFFSTDTLEILNQITLG---YDFV-DTAITSDCSNVVVTSDFC--------QTLVQIETQL--- 71 (331)
T ss_dssp CCEEEEEEGG--GTEEEEEETTTCCEEEEEECC---CCEE-EEEECSSSCEEEEEESTT--------CEEEEEECSS---
T ss_pred CCEEEEEecC--CCeEEEEeCcccceeeeEEcc---CCcc-eEEEcCCCCEEEEEeCCC--------CeEEEEECCC---
Confidence 4555555432 237888999888764432221 1122 556655544566654421 2447777776
Q ss_pred CCcc--cccCCCCCcccCCCCC-eEEE-CC-EEEEEecCC-C--EEEEEECCCCcEEEeecCCccccCCCcee-eeCCe-
Q 045071 248 FSLW--GTTSSLPRLCSLESGR-MVQV-NG-KFYCMNYSP-F--SVLAYDISANAWFNIQAPMRRFLRSPSLL-DSNGK- 317 (453)
Q Consensus 248 ~~~W--~~~~~~p~~~~~~~~~-~v~~-~G-~lY~~~~~~-~--~i~~yD~~~~~W~~i~~p~~~~~~~~~lv-~~~g~- 317 (453)
+.- ....... .... .++. +| .+| ..... . .|..||+.+++.... .+... ....++ .-+|+
T Consensus 72 -~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~-~~~~~~~~~~i~v~d~~~~~~~~~-~~~~~--~~~~~~~spdg~~ 141 (331)
T 3u4y_A 72 -EPPKVVAIQEGQ-----SSMADVDITPDDQFAV-TVTGLNHPFNMQSYSFLKNKFIST-IPIPY--DAVGIAISPNGNG 141 (331)
T ss_dssp -SSCEEEEEEECS-----SCCCCEEECTTSSEEE-ECCCSSSSCEEEEEETTTTEEEEE-EECCT--TEEEEEECTTSSC
T ss_pred -CceeEEecccCC-----CCccceEECCCCCEEE-EecCCCCcccEEEEECCCCCeEEE-EECCC--CccceEECCCCCE
Confidence 332 1111100 0112 2232 34 466 43332 2 899999998775433 12111 111222 23565
Q ss_pred EEEEEEEeccCCCCCCc-EEEEEeecCCCCeEEE--eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEEC
Q 045071 318 LILVAAVEKSKLNVPKS-LRLWSLQACGTLWAEI--ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDL 394 (453)
Q Consensus 318 L~vv~~~~~~~~~~~~~-i~vw~ld~~~~~W~~v--~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~ 394 (453)
||+.+. .. .. +.+|.++.. +.-... ..++. ......+.....|+.+|+.....+.+.+||+
T Consensus 142 l~~~~~-~~------~~~i~~~~~~~~-g~~~~~~~~~~~~--------~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 142 LILIDR-SS------ANTVRRFKIDAD-GVLFDTGQEFISG--------GTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp EEEEEE-TT------TTEEEEEEECTT-CCEEEEEEEEECS--------SSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred EEEEec-CC------CceEEEEEECCC-CcEeecCCccccC--------CCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 665443 21 24 789988853 222221 11111 0000122222356678888766789999999
Q ss_pred CCCce
Q 045071 395 CMKSW 399 (453)
Q Consensus 395 ~~~~W 399 (453)
++.+.
T Consensus 206 ~~~~~ 210 (331)
T 3u4y_A 206 QNPEN 210 (331)
T ss_dssp SSTTS
T ss_pred CCCcc
Confidence 88764
No 64
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=89.77 E-value=5 Score=37.04 Aligned_cols=122 Identities=11% Similarity=0.143 Sum_probs=62.7
Q ss_pred CCEEEEEecC--CCEEEEEECCCCcEEEeecCCccccCCC-cee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCe
Q 045071 272 NGKFYCMNYS--PFSVLAYDISANAWFNIQAPMRRFLRSP-SLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLW 347 (453)
Q Consensus 272 ~G~lY~~~~~--~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W 347 (453)
+|++|+.... ...|..||+.+++++.+..... ....+ .++ .-+|+.++++... ...+.+|.++. .+..
T Consensus 50 dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~-~g~~ 121 (347)
T 3hfq_A 50 KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-PGTPPAYVAVDEARQLVYSANYH------KGTAEVMKIAA-DGAL 121 (347)
T ss_dssp TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEE-ESCCCSEEEEETTTTEEEEEETT------TTEEEEEEECT-TSCE
T ss_pred CCeEEEEEecCCCceEEEEEecCCcEEEeeeeec-CCCCCEEEEECCCCCEEEEEeCC------CCEEEEEEeCC-CCCe
Confidence 6888887652 3689999998888766533111 11222 232 3456644444321 23678998875 3445
Q ss_pred EEEeecCHHHHHHhhcccCCCc--EEEEeeCCEEEEEEcCCCeEEEEECC-CCceEEc
Q 045071 348 AEIERMPQQLYAQFAEIEAGNG--FDTIGHGEFIVIVIRGSDKALLFDLC-MKSWQWI 402 (453)
Q Consensus 348 ~~v~~mp~~~~~~~~~~~~~~~--~~~~~~g~~I~l~~~~~~~v~~Yd~~-~~~W~~l 402 (453)
..+..+...-..-......... +.....|. +|+.....+.+.+||+. +++...+
T Consensus 122 ~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 122 TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEE
T ss_pred eecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEe
Confidence 4444432100000000000001 12222455 88777667889999998 5555543
No 65
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.59 E-value=8.7 Score=34.62 Aligned_cols=176 Identities=7% Similarity=0.040 Sum_probs=81.1
Q ss_pred eeEEEEcCcccc--eecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCC
Q 045071 181 KTLILCNPVTGS--LSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLP 258 (453)
Q Consensus 181 ~~~~v~NP~T~~--w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p 258 (453)
..+.++|+.|++ |+.-..- ... .. .+...+++ ++++.+. ..+..||. +|. -.|+.-....
T Consensus 15 ~~v~~~d~~tG~~~w~~~~~~-~~~-~~--~~~~~pdG-~ilvs~~----------~~V~~~d~-~G~--~~W~~~~~~~ 76 (276)
T 3no2_A 15 NKIAIINKDTKEIVWEYPLEK-GWE-CN--SVAATKAG-EILFSYS----------KGAKMITR-DGR--ELWNIAAPAG 76 (276)
T ss_dssp SEEEEEETTTTEEEEEEECCT-TCC-CC--EEEECTTS-CEEEECB----------SEEEEECT-TSC--EEEEEECCTT
T ss_pred CEEEEEECCCCeEEEEeCCCc-cCC-Cc--CeEECCCC-CEEEeCC----------CCEEEECC-CCC--EEEEEcCCCC
Confidence 478888988876 4432211 011 12 23333333 3444322 13466776 433 5676533110
Q ss_pred CcccCCCCCeEEECCEEEEEecC-CCEEEEEECCCCcEEEeecCC--ccccCCCce--eeeCCeEEEEEEEeccCCCCCC
Q 045071 259 RLCSLESGRMVQVNGKFYCMNYS-PFSVLAYDISANAWFNIQAPM--RRFLRSPSL--LDSNGKLILVAAVEKSKLNVPK 333 (453)
Q Consensus 259 ~~~~~~~~~~v~~~G~lY~~~~~-~~~i~~yD~~~~~W~~i~~p~--~~~~~~~~l--v~~~g~L~vv~~~~~~~~~~~~ 333 (453)
. ... ......+|.+++.... ...++++|++.+.-....... ......+.. ...+|.++++.. .. .
T Consensus 77 ~--~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~-~~------~ 146 (276)
T 3no2_A 77 C--EMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF-AT------S 146 (276)
T ss_dssp C--EEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET-TT------T
T ss_pred c--ccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEec-CC------C
Confidence 0 110 1123346777766554 568899998655322232211 111111111 234677765442 11 1
Q ss_pred cEEEEEeecC-CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 334 SLRLWSLQAC-GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 334 ~i~vw~ld~~-~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.|.++|.. +..|+.-. +. ......... ++.+++......+++.+|+++.+.
T Consensus 147 --~v~~~d~~G~~~w~~~~--~~----------~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 147 --EVREIAPNGQLLNSVKL--SG----------TPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp --EEEEECTTSCEEEEEEC--SS----------CCCEEEECT-TSCEEEECBTTSEEEEECTTTCCE
T ss_pred --EEEEECCCCCEEEEEEC--CC----------CccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcE
Confidence 45555654 34465322 11 001122222 344555544456899999997653
No 66
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=89.55 E-value=5.6 Score=35.93 Aligned_cols=137 Identities=18% Similarity=0.117 Sum_probs=80.1
Q ss_pred eEEECCEEEEEecCCCEEEEEECCCCcE-EEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCC
Q 045071 268 MVQVNGKFYCMNYSPFSVLAYDISANAW-FNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTL 346 (453)
Q Consensus 268 ~v~~~G~lY~~~~~~~~i~~yD~~~~~W-~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~ 346 (453)
....++++|.++.....+.+||.++.+- ..++.+. ....+...+++||+..+ .+ +|+.+|+.+.+
T Consensus 101 it~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~----eGwGLt~Dg~~L~vSdG--s~--------~l~~iDp~T~~ 166 (268)
T 3nok_A 101 LASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG----EGWGLCYWNGKLVRSDG--GT--------MLTFHEPDGFA 166 (268)
T ss_dssp EEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSS----CCCCEEEETTEEEEECS--SS--------EEEEECTTTCC
T ss_pred EEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC----ceeEEecCCCEEEEECC--CC--------EEEEEcCCCCe
Confidence 4556789999998778999999998654 3344331 22355666777887542 21 78889976554
Q ss_pred eEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce-EEcC--CC-CCc---CCCCCCCCCCC
Q 045071 347 WAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW-QWIP--RC-PYV---QANNCGGNYGD 419 (453)
Q Consensus 347 W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W-~~l~--~~-p~~---~~~~~~~~~~~ 419 (453)
= +.+++... ... ....-..+.++ ++.||+.....+.|.+-|+++++- .++. .+ +.. .. .
T Consensus 167 v--~~~I~V~~-~g~-~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~------~-- 232 (268)
T 3nok_A 167 L--VGAVQVKL-RGQ-PVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVT------N-- 232 (268)
T ss_dssp E--EEEEECEE-TTE-ECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCC------C--
T ss_pred E--EEEEEeCC-CCc-ccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCccccccccc------C--
Confidence 3 33332100 000 00000123333 678998777788999999999864 3332 11 100 11 0
Q ss_pred CCceeEEEEeccc
Q 045071 420 GEGELHGFAYEPR 432 (453)
Q Consensus 420 ~~~~~~~~~f~P~ 432 (453)
.+..+.|++|.|.
T Consensus 233 ~~~vlNGIA~dp~ 245 (268)
T 3nok_A 233 PEAVLNGIAVEPG 245 (268)
T ss_dssp TTCCEEEEEECTT
T ss_pred cCCceEEEEEcCC
Confidence 1236789999995
No 67
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.11 E-value=2.3 Score=38.89 Aligned_cols=140 Identities=13% Similarity=0.117 Sum_probs=74.5
Q ss_pred CC-EEEEEecCCCEEEEEECC--CCcEEEee--cCCccc---cCCC-cee-eeCCeEEEEEEEeccCCCCCCcEEEEEee
Q 045071 272 NG-KFYCMNYSPFSVLAYDIS--ANAWFNIQ--APMRRF---LRSP-SLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQ 341 (453)
Q Consensus 272 ~G-~lY~~~~~~~~i~~yD~~--~~~W~~i~--~p~~~~---~~~~-~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld 341 (453)
+| .+|+.......+..||+. ++++..+. ...+.. ...+ .+. .-+|+.+++.... ...+.+|.++
T Consensus 188 dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~------~~~i~v~d~~ 261 (343)
T 1ri6_A 188 NEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT------ASLITVFSVS 261 (343)
T ss_dssp TSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT------TTEEEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecC------CCEEEEEEEc
Confidence 45 477776555789999985 35443221 111111 1111 122 2345544433311 2367899888
Q ss_pred cCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEE--ECCCCceEEcCCCCCcCCCCCCCCCCC
Q 045071 342 ACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLF--DLCMKSWQWIPRCPYVQANNCGGNYGD 419 (453)
Q Consensus 342 ~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Y--d~~~~~W~~l~~~p~~~~~~~~~~~~~ 419 (453)
...+.++.+..++... ....+.....|+.+|+.....+.+.+| |.++++++.+...+..
T Consensus 262 ~~~~~~~~~~~~~~~~--------~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g----------- 322 (343)
T 1ri6_A 262 EDGSVLSKEGFQPTET--------QPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG----------- 322 (343)
T ss_dssp TTSCCEEEEEEEECSS--------SCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-----------
T ss_pred CCCCceEEeeeecCCC--------ccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-----------
Confidence 6566777776654310 112333334577888876556788888 6668888877655431
Q ss_pred CCceeEEEEeccccCCchh
Q 045071 420 GEGELHGFAYEPRLATPVT 438 (453)
Q Consensus 420 ~~~~~~~~~f~P~l~~~~~ 438 (453)
....+++|.|.-..+..
T Consensus 323 --~~p~~i~~~~~~~~~~~ 339 (343)
T 1ri6_A 323 --QGPMWVVVNAHEGGSHH 339 (343)
T ss_dssp --SSCCEEEEEEEC-----
T ss_pred --CCCeeEEEEcccCCccc
Confidence 13457777776655433
No 68
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=88.76 E-value=17 Score=34.76 Aligned_cols=183 Identities=10% Similarity=-0.048 Sum_probs=91.4
Q ss_pred eEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCC-CCcccccCCCCCc
Q 045071 182 TLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGF-FSLWGTTSSLPRL 260 (453)
Q Consensus 182 ~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~-~~~W~~~~~~p~~ 260 (453)
.+...++.++.+..+-+ ......++.++...-+||++.... .....++...... ......+..
T Consensus 93 ~I~~i~l~~~~~~~~~~----~~~~~~~l~~d~~~~~lywsD~~~--------~~I~~~~~~g~~~~~~~~~~~~~---- 156 (400)
T 3p5b_L 93 EVRKMTLDRSEYTSLIP----NLRNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHGVSSYDTVISR---- 156 (400)
T ss_dssp EEEEECTTSCSCEEEEC----SCSCEEEEEEETTTTEEEEEETTT--------TEEEEEEC------CCCEEEECS----
T ss_pred eeEEEccCCcceeEecc----ccCcceEEeeeeccCceEEEecCC--------CeEEEEEcccCCCCCcceEEEeC----
Confidence 56777777665544421 122345777776566888875431 1234444433100 001111111
Q ss_pred ccCCCCCe-EE--ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCCCc
Q 045071 261 CSLESGRM-VQ--VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVPKS 334 (453)
Q Consensus 261 ~~~~~~~~-v~--~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~~~ 334 (453)
......+ ++ .++.|||.......|.++|++...-..+... ....+ .|+. .+|.||+... ... .
T Consensus 157 -~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~---~~~~P~~iavdp~~g~ly~td~-~~~-----~- 225 (400)
T 3p5b_L 157 -DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDW-GTP-----A- 225 (400)
T ss_dssp -SCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEEC---SSCCEEEEEEETTTTEEEEEEC-SSS-----C-
T ss_pred -CCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeC---CCCCcceEEEecccCeEEEEeC-CCC-----C-
Confidence 0111122 33 3689999988778999999998765544221 11222 2333 3688887542 111 1
Q ss_pred EEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 335 LRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 335 i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
.|++++.+...=+.+.. . ++. ...++..-..+++||+.......|.++|++...-+.
T Consensus 226 -~I~~~~~dG~~~~~~~~--~----~l~---~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~ 282 (400)
T 3p5b_L 226 -KIKKGGLNGVDIYSLVT--E----NIQ---WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 282 (400)
T ss_dssp -CEEEEETTSCSCEEEEC--S----SCS---CEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEE
T ss_pred -EEEEEeCCCCccEEEEE--C----CCC---ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEE
Confidence 46666653222122211 0 000 001233222478899987767888888887654433
No 69
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=88.72 E-value=12 Score=32.83 Aligned_cols=191 Identities=11% Similarity=0.072 Sum_probs=89.6
Q ss_pred eecCceEEE-EecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcc
Q 045071 165 SSSGGLVCW-VSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHID 243 (453)
Q Consensus 165 ~s~~Gll~~-~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~ 243 (453)
...+|.+++ .... ...+.++|+-++....++...... ..++..++++ ++++.... ....+|+..
T Consensus 31 ~~~~g~l~v~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~---p~~i~~~~~g-~l~v~~~~---------~~i~~~d~~ 95 (270)
T 1rwi_B 31 VDSAGNVYVTSEGM--YGRVVKLATGSTGTTVLPFNGLYQ---PQGLAVDGAG-TVYVTDFN---------NRVVTLAAG 95 (270)
T ss_dssp ECTTCCEEEEECSS--SCEEEEECC-----EECCCCSCCS---CCCEEECTTC-CEEEEETT---------TEEEEECTT
T ss_pred ECCCCCEEEEccCC--CCcEEEecCCCcccceEeeCCcCC---cceeEECCCC-CEEEEcCC---------CEEEEEeCC
Confidence 344566666 4222 247888998777655543221111 1245555443 36655431 123556655
Q ss_pred cCCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee-eCCeEE
Q 045071 244 AGGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD-SNGKLI 319 (453)
Q Consensus 244 ~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~-~~g~L~ 319 (453)
. ..-..... .. ......+.+ +|.+|+.......|..||..+........ . ....+ .++. -+|+||
T Consensus 96 ~----~~~~~~~~-~~---~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~--~-~~~~p~~i~~~~~g~l~ 164 (270)
T 1rwi_B 96 S----NNQTVLPF-DG---LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPF--T-GLNDPDGVAVDNSGNVY 164 (270)
T ss_dssp C----SCCEECCC-CS---CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCC--C-SCCSCCCEEECTTCCEE
T ss_pred C----ceEeeeec-CC---cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecc--c-cCCCceeEEEeCCCCEE
Confidence 4 32222211 10 000112333 67899887655689999877665433211 1 11122 3433 368888
Q ss_pred EEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEE-EEeeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 320 LVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFD-TIGHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 320 vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~-~~~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
+... .. . .|+.++.....-... .... + ..... ++..++.||+.....+.+..||..++.
T Consensus 165 v~~~--~~-----~--~i~~~~~~~~~~~~~-~~~~-----~-----~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 165 VTDT--DN-----N--RVVKLEAESNNQVVL-PFTD-----I-----TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp EEEG--GG-----T--EEEEECTTTCCEEEC-CCSS-----C-----CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred EEEC--CC-----C--EEEEEecCCCceEee-cccC-----C-----CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 7542 11 1 556666543332211 1110 0 01122 222244888887667889999998765
Q ss_pred eEE
Q 045071 399 WQW 401 (453)
Q Consensus 399 W~~ 401 (453)
-..
T Consensus 225 ~~~ 227 (270)
T 1rwi_B 225 STV 227 (270)
T ss_dssp CEE
T ss_pred cee
Confidence 433
No 70
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.63 E-value=27 Score=36.89 Aligned_cols=110 Identities=9% Similarity=-0.059 Sum_probs=61.4
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
++.|||.......|.++|+....-+.+... ....+ .|+. .+|.||+... ... . +|++.+.+...=+
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~---~l~~P~gIaVDp~~g~LYwtD~-g~~-----~--~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDW-GTP-----A--KIKKGGLNGVDIY 550 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC---TTCCEEEEEEETTTTEEEEEEC-SSS-----C--EEEEEETTSCCEE
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeC---CCCCcceEEEecCCCCEEEecC-CCC-----C--eEEEEecCCCceE
Confidence 579999988778999999997765554221 11223 3433 3688997652 111 1 5666665433222
Q ss_pred EEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
.+.. . .+. ...++..-..+++||+......+|.++|+....-+.
T Consensus 551 ~lv~--~----~l~---~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~ 594 (791)
T 3m0c_C 551 SLVT--E----NIQ---WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKT 594 (791)
T ss_dssp EEEC--S----SCS---CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEe--C----CCC---CceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEE
Confidence 2211 0 000 001222222477888887667788888887654333
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=88.38 E-value=16 Score=34.38 Aligned_cols=193 Identities=9% Similarity=-0.002 Sum_probs=87.8
Q ss_pred eeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcc
Q 045071 164 ASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHID 243 (453)
Q Consensus 164 ~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~ 243 (453)
++..++.++..+.. ..+.+||..+++...+-.... .....++...+++-.+++.+.+ -...+|+..
T Consensus 99 ~~~s~~~l~~~~~d---~~v~lw~~~~~~~~~~~~~~~--~~~v~~v~~s~~~~~l~~~~~d---------g~i~iwd~~ 164 (401)
T 4aez_A 99 LDWSNLNVVAVALE---RNVYVWNADSGSVSALAETDE--STYVASVKWSHDGSFLSVGLGN---------GLVDIYDVE 164 (401)
T ss_dssp EEECTTSEEEEEET---TEEEEEETTTCCEEEEEECCT--TCCEEEEEECTTSSEEEEEETT---------SCEEEEETT
T ss_pred EeecCCCEEEEECC---CeEEEeeCCCCcEeEeeecCC--CCCEEEEEECCCCCEEEEECCC---------CeEEEEECc
Confidence 34334444444332 378999998887655433321 1223345555544344433322 245788876
Q ss_pred cCCCCCcccc-cCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEE
Q 045071 244 AGGFFSLWGT-TSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLIL 320 (453)
Q Consensus 244 ~~~~~~~W~~-~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~v 320 (453)
+ +.-.. +..... . -..+..++.+.+.+.....|..||+....-..... ........-+. -+|++++
T Consensus 165 ~----~~~~~~~~~~~~--~---v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~ 233 (401)
T 4aez_A 165 S----QTKLRTMAGHQA--R---VGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTL--QGHSSEVCGLAWRSDGLQLA 233 (401)
T ss_dssp T----CCEEEEECCCSS--C---EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEE--ECCSSCEEEEEECTTSSEEE
T ss_pred C----CeEEEEecCCCC--c---eEEEEECCCEEEEEcCCCCEEEEecccCcceeeEE--cCCCCCeeEEEEcCCCCEEE
Confidence 6 32211 111000 0 11233345444444445789999998433211111 11111111122 2577776
Q ss_pred EEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEc--CCCeEEEEECCCCc
Q 045071 321 VAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIR--GSDKALLFDLCMKS 398 (453)
Q Consensus 321 v~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~--~~~~v~~Yd~~~~~ 398 (453)
++... ..+.||.+... . .+..+... ......+.....++.+++... ..+.+.+||+.+.+
T Consensus 234 s~~~d-------~~v~iwd~~~~--~--~~~~~~~~-------~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~ 295 (401)
T 4aez_A 234 SGGND-------NVVQIWDARSS--I--PKFTKTNH-------NAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA 295 (401)
T ss_dssp EEETT-------SCEEEEETTCS--S--EEEEECCC-------SSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC
T ss_pred EEeCC-------CeEEEccCCCC--C--ccEEecCC-------cceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC
Confidence 66522 25788976632 1 22222110 000112222223445555443 36778888887764
Q ss_pred e
Q 045071 399 W 399 (453)
Q Consensus 399 W 399 (453)
.
T Consensus 296 ~ 296 (401)
T 4aez_A 296 R 296 (401)
T ss_dssp E
T ss_pred E
Confidence 3
No 72
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=88.35 E-value=16 Score=37.03 Aligned_cols=196 Identities=10% Similarity=-0.001 Sum_probs=101.9
Q ss_pred CceEEEEecCCCCeeEEEEcCccccee-cCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCC
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLS-QLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGG 246 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~-~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~ 246 (453)
++++++.... ...+.|+|+.|++-. .++.-.. ..++.+.+++-.+|+.+.+ ..+.+||...
T Consensus 166 ~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~-----p~~v~~SpDGr~lyv~~~d---------g~V~viD~~~-- 227 (567)
T 1qks_A 166 ENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYA-----VHISRLSASGRYLFVIGRD---------GKVNMIDLWM-- 227 (567)
T ss_dssp GGEEEEEETT--TTEEEEEETTTCCEEEEEECSSC-----EEEEEECTTSCEEEEEETT---------SEEEEEETTS--
T ss_pred CceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCC-----ccceEECCCCCEEEEEcCC---------CeEEEEECCC--
Confidence 4566666543 347999999998654 3332111 1245565555456665432 2357777741
Q ss_pred CCCcccccCCCCCcccCCCCCeEEE-----CC-EEEEEecCCCEEEEEECCCCcEEE-eecCC-cc-c---c---CCCce
Q 045071 247 FFSLWGTTSSLPRLCSLESGRMVQV-----NG-KFYCMNYSPFSVLAYDISANAWFN-IQAPM-RR-F---L---RSPSL 311 (453)
Q Consensus 247 ~~~~W~~~~~~p~~~~~~~~~~v~~-----~G-~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~-~~-~---~---~~~~l 311 (453)
.+-+.+..++.... ....++. +| .+|+..+....+.++|..+.+-.. ++... +. . . +...+
T Consensus 228 --~t~~~v~~i~~G~~--P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 228 --KEPTTVAEIKIGSE--ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp --SSCCEEEEEECCSE--EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred --CCCcEeEEEecCCC--CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 11122222211000 0123343 45 588888777899999988865433 32211 00 0 0 11123
Q ss_pred ee-eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEE
Q 045071 312 LD-SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKAL 390 (453)
Q Consensus 312 v~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~ 390 (453)
+. .++..+++.. .... +||.+|.......++..++... +. ..+.....|.++|+.....+++.
T Consensus 304 ~~s~~~~~~vv~~-~~~g-------~v~~vd~~~~~~~~v~~i~~~~---~~-----~d~~~~pdgr~~~va~~~sn~V~ 367 (567)
T 1qks_A 304 LASHYRPEFIVNV-KETG-------KILLVDYTDLNNLKTTEISAER---FL-----HDGGLDGSHRYFITAANARNKLV 367 (567)
T ss_dssp EECSSSSEEEEEE-TTTT-------EEEEEETTCSSEEEEEEEECCS---SE-----EEEEECTTSCEEEEEEGGGTEEE
T ss_pred EEcCCCCEEEEEe-cCCC-------eEEEEecCCCccceeeeeeccc---cc-----cCceECCCCCEEEEEeCCCCeEE
Confidence 32 2345555554 2211 7777776655565665553210 00 01122234677888776678999
Q ss_pred EEECCCCceEE
Q 045071 391 LFDLCMKSWQW 401 (453)
Q Consensus 391 ~Yd~~~~~W~~ 401 (453)
++|.++++...
T Consensus 368 ViD~~t~kl~~ 378 (567)
T 1qks_A 368 VIDTKEGKLVA 378 (567)
T ss_dssp EEETTTTEEEE
T ss_pred EEECCCCcEEE
Confidence 99999987543
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=88.12 E-value=17 Score=34.12 Aligned_cols=119 Identities=9% Similarity=0.129 Sum_probs=59.7
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCce-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSL-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
+|.+.+.+.....|..||+.+.+-...............+ ..-+|++++++.... ....+.||.+......- ..
T Consensus 187 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~----~d~~i~iwd~~~~~~~~-~~ 261 (402)
T 2aq5_A 187 DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM----SERQVALWDTKHLEEPL-SL 261 (402)
T ss_dssp TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT----CCEEEEEEETTBCSSCS-EE
T ss_pred CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC----CCceEEEEcCccccCCc-eE
Confidence 4554444444478999999987653321111111111122 224677776653111 12367888776432211 12
Q ss_pred eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCc--eEEcC
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKS--WQWIP 403 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~--W~~l~ 403 (453)
..+... .....+.....++.+++.+...+.+.+||+.+.+ ...+.
T Consensus 262 ~~~~~~--------~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~ 308 (402)
T 2aq5_A 262 QELDTS--------SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLS 308 (402)
T ss_dssp EECCCC--------SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEE
T ss_pred EeccCC--------CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeec
Confidence 222210 0111122233567787776667899999999876 44443
No 74
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=87.61 E-value=20 Score=36.40 Aligned_cols=109 Identities=13% Similarity=0.014 Sum_probs=62.3
Q ss_pred CCEEEEEecCCC--EEEEEECCCCcEEEeecCCccccC-------CCceee-eCCeEEEEEEEeccCCCCCCcEEEEEee
Q 045071 272 NGKFYCMNYSPF--SVLAYDISANAWFNIQAPMRRFLR-------SPSLLD-SNGKLILVAAVEKSKLNVPKSLRLWSLQ 341 (453)
Q Consensus 272 ~G~lY~~~~~~~--~i~~yD~~~~~W~~i~~p~~~~~~-------~~~lv~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld 341 (453)
+|++|+...... .|..+|+.++++..+.. ...... ...+.- -+|++++.+.. ...+||.++
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~-~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~--------~~~~l~~~d 322 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLCR-REEEFAGPLWTPGMRWFAPLANGLIAVVHGK--------GAAVLGILD 322 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESSC-CSSBSSCCCCSTTCCSEEECTTSCEEEEEBS--------SSCEEEEEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeeccc-ccccccCccccccCceEeEeCCCEEEEEEEc--------CccEEEEEE
Confidence 688887765433 79999998888876522 111111 012222 26787765532 145899998
Q ss_pred cCCCCeEEEeecCHHHHHHhhcccCCCcEE-E-EeeCCEEEEEEcC---CCeEEEEECCCCceEEc
Q 045071 342 ACGTLWAEIERMPQQLYAQFAEIEAGNGFD-T-IGHGEFIVIVIRG---SDKALLFDLCMKSWQWI 402 (453)
Q Consensus 342 ~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~-~-~~~g~~I~l~~~~---~~~v~~Yd~~~~~W~~l 402 (453)
...+.... +... ...+. + ...++.+++...+ ...++.+|+.+++.+.+
T Consensus 323 ~~~~~~~~---l~~~----------~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l 375 (662)
T 3azo_A 323 PESGELVD---AAGP----------WTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTI 375 (662)
T ss_dssp TTTTEEEE---CCSS----------CCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEE
T ss_pred CCCCcEEE---ecCC----------CCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEe
Confidence 76554433 3210 01112 2 2357777665433 24788889988887766
No 75
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=87.52 E-value=16 Score=33.72 Aligned_cols=148 Identities=9% Similarity=0.089 Sum_probs=64.5
Q ss_pred eEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcc
Q 045071 182 TLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLC 261 (453)
Q Consensus 182 ~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~ 261 (453)
.+.++|..++++...............++...+++..++..+.+ ..+.+|+... +.+..+..+....
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D---------~~v~iw~~~~----~~~~~~~~~~~h~ 105 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD---------ATTCIWKKNQ----DDFECVTTLEGHE 105 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT---------SCEEEEEECC----C-EEEEEEECCCS
T ss_pred eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC---------CcEEEEEccC----CCeEEEEEccCCC
Confidence 56677776665532211111111223345555544444443332 2346777666 4443322221100
Q ss_pred cCCCCCeEEE-CCEEEEEecCCCEEEEEECCCCc-EEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEE
Q 045071 262 SLESGRMVQV-NGKFYCMNYSPFSVLAYDISANA-WFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRL 337 (453)
Q Consensus 262 ~~~~~~~v~~-~G~lY~~~~~~~~i~~yD~~~~~-W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~v 337 (453)
. .-....+. +|.+.+.+.....|..+|+.++. +..+.. ...+.....-+. -+|++++.+.. + ..+++
T Consensus 106 ~-~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~l~s~s~-d------~~i~~ 176 (345)
T 3fm0_A 106 N-EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV-LNSHTQDVKHVVWHPSQELLASASY-D------DTVKL 176 (345)
T ss_dssp S-CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE-ECCCCSCEEEEEECSSSSCEEEEET-T------SCEEE
T ss_pred C-CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE-ecCcCCCeEEEEECCCCCEEEEEeC-C------CcEEE
Confidence 0 00011221 35444444444678889987653 332211 111111111122 25666655542 2 26799
Q ss_pred EEeecCCCCeEEEeec
Q 045071 338 WSLQACGTLWAEIERM 353 (453)
Q Consensus 338 w~ld~~~~~W~~v~~m 353 (453)
|.++ ...|..+..+
T Consensus 177 w~~~--~~~~~~~~~~ 190 (345)
T 3fm0_A 177 YREE--EDDWVCCATL 190 (345)
T ss_dssp EEEE--TTEEEEEEEE
T ss_pred EEec--CCCEEEEEEe
Confidence 9876 4567655554
No 76
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=87.38 E-value=21 Score=34.14 Aligned_cols=218 Identities=11% Similarity=0.078 Sum_probs=109.0
Q ss_pred ecCc-eEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc
Q 045071 166 SSGG-LVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA 244 (453)
Q Consensus 166 s~~G-ll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~ 244 (453)
+-+| .|++.........++++|..+++.+.+..... ...++...+++-++++.+.... .....+|+..+
T Consensus 187 Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~----~~~~~~~spdg~~la~~~~~~g------~~~i~~~d~~~ 256 (415)
T 2hqs_A 187 SPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPR----HNGAPAFSPDGSKLAFALSKTG------SLNLYVMDLAS 256 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSS----CEEEEEECTTSSEEEEEECTTS------SCEEEEEETTT
T ss_pred cCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCC----cccCEEEcCCCCEEEEEEecCC------CceEEEEECCC
Confidence 3344 34444333223579999999988766543321 2234555555555664443211 12346677766
Q ss_pred CCCCCcccccCCCCCcccCCCCCeEEE-CCE-EEEEecC--CCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEE
Q 045071 245 GGFFSLWGTTSSLPRLCSLESGRMVQV-NGK-FYCMNYS--PFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLIL 320 (453)
Q Consensus 245 ~~~~~~W~~~~~~p~~~~~~~~~~v~~-~G~-lY~~~~~--~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~v 320 (453)
+....+..... .. ....+. +|. |++.... ...|..+|+.+++-..+.... ..... ....-+|+.++
T Consensus 257 ----~~~~~l~~~~~--~~--~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~-~~~spdG~~l~ 326 (415)
T 2hqs_A 257 ----GQIRQVTDGRS--NN--TEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEG-SQNQD-ADVSSDGKFMV 326 (415)
T ss_dssp ----CCEEECCCCSS--CE--EEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSS-SEEEE-EEECTTSSEEE
T ss_pred ----CCEEeCcCCCC--cc--cceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCC-CcccC-eEECCCCCEEE
Confidence 44443322111 00 112222 454 5555432 237889999987754432211 00000 11223677665
Q ss_pred EEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCC--CeEEEEECCCCc
Q 045071 321 VAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGS--DKALLFDLCMKS 398 (453)
Q Consensus 321 v~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~--~~v~~Yd~~~~~ 398 (453)
++..... ...|+.++..+++...+..-. ..........|..|++..... ..+.++|+..+.
T Consensus 327 ~~~~~~g------~~~i~~~d~~~~~~~~l~~~~-----------~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~ 389 (415)
T 2hqs_A 327 MVSSNGG------QQHIAKQDLATGGVQVLSSTF-----------LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF 389 (415)
T ss_dssp EEEECSS------CEEEEEEETTTCCEEECCCSS-----------SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC
T ss_pred EEECcCC------ceEEEEEECCCCCEEEecCCC-----------CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc
Confidence 5543321 235555565555554322110 001222233566676654432 379999999888
Q ss_pred eEEcCCCCCcCCCCCCCCCCCCCceeEEEEeccccCC
Q 045071 399 WQWIPRCPYVQANNCGGNYGDGEGELHGFAYEPRLAT 435 (453)
Q Consensus 399 W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~f~P~l~~ 435 (453)
.+.++.- ...+...+|.|.++-
T Consensus 390 ~~~l~~~---------------~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 390 KARLPAT---------------DGQVKFPAWSPYLHH 411 (415)
T ss_dssp EEECCCS---------------SSEEEEEEECCCCCC
T ss_pred EEEeeCC---------------CCCCcCCcccccccc
Confidence 7777532 125778888887764
No 77
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=85.81 E-value=7.1 Score=37.15 Aligned_cols=100 Identities=7% Similarity=0.002 Sum_probs=49.8
Q ss_pred eEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcc
Q 045071 182 TLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLC 261 (453)
Q Consensus 182 ~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~ 261 (453)
.++++|+.++++..+...+.... ..++...+ .-++++.+... ....+||..+ +............
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~--~~~~~~s~-~~~~~~~~~~~--------~~i~~~d~~~----g~~~~~~~~~~~~ 166 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQ--PKSVRFID-NTRLAIPLLED--------EGMDVLDINS----GQTVRLSPPEKYK 166 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSC--BCCCEESS-SSEEEEEBTTS--------SSEEEEETTT----CCEEEECCCHHHH
T ss_pred EEEEECCCCCcceEEEEEcCCCC--ceEEEEeC-CCeEEEEeCCC--------CeEEEEECCC----CeEeeecCccccc
Confidence 67888887664444332221111 11334444 34566665431 2357888776 3333211110000
Q ss_pred cCC-CCCeEEE--CCEEEEEecCCCEEEEEECCCCcEE
Q 045071 262 SLE-SGRMVQV--NGKFYCMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 262 ~~~-~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~ 296 (453)
... .-..+.+ +|.+|+.......|..||+.+.+..
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~ 204 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK 204 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE
Confidence 000 0011222 6788877766578999999986543
No 78
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=85.79 E-value=21 Score=32.68 Aligned_cols=180 Identities=9% Similarity=-0.042 Sum_probs=91.3
Q ss_pred eEEEEcCcccceecC-CCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcc-ccc-C-CC
Q 045071 182 TLILCNPVTGSLSQL-PPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLW-GTT-S-SL 257 (453)
Q Consensus 182 ~~~v~NP~T~~w~~L-P~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W-~~~-~-~~ 257 (453)
.+.+.++.+++...+ +.+ ....++.++...-+||++.... .....++.+.... ..- +.+ . .+
T Consensus 11 ~I~~i~~~~~~~~~~~~~~-----~~p~g~~~d~~~~~ly~~D~~~--------~~I~~~~~~g~~~-~~~~~~~~~~~~ 76 (316)
T 1ijq_A 11 EVRKMTLDRSEYTSLIPNL-----RNVVALDTEVASNRIYWSDLSQ--------RMICSTQLDRAHG-VSSYDTVISRDI 76 (316)
T ss_dssp SEEEEETTSCCCEEEECSC-----SSEEEEEEETTTTEEEEEETTT--------TEEEEEEC---------CEEEECSSC
T ss_pred eEEEEECCCcceEehhcCC-----CceEEEEEEeCCCEEEEEECCC--------CcEEEEECCCCCC-CcccEEEEeCCC
Confidence 567777777655433 222 2235777776556788875431 2334555443000 011 111 1 11
Q ss_pred CCcccCCCCCeEE--ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCC
Q 045071 258 PRLCSLESGRMVQ--VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVP 332 (453)
Q Consensus 258 p~~~~~~~~~~v~--~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~ 332 (453)
. .....++ .+|.+||.......|.++|++...-..+... ....+ .++. .+|.||+... ...
T Consensus 77 ~-----~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~---~~~~P~~iavdp~~g~ly~~d~-~~~----- 142 (316)
T 1ijq_A 77 Q-----APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRE---NGSKPRAIVVDPVHGFMYWTDW-GTP----- 142 (316)
T ss_dssp S-----CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEEC---TTCCEEEEEEETTTTEEEEEEC-SSS-----
T ss_pred C-----CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEEC---CCCCcceEEeCCCCCEEEEEcc-CCC-----
Confidence 1 1122233 3689999987778999999987654433211 11222 3333 4688887652 110
Q ss_pred CcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 333 KSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 333 ~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
-.|++++.+...-+.+..- .+. ...++..-..++.||+.....++|.++|++...-+
T Consensus 143 --~~I~~~~~dG~~~~~~~~~------~~~---~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~ 199 (316)
T 1ijq_A 143 --AKIKKGGLNGVDIYSLVTE------NIQ---WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 199 (316)
T ss_dssp --CEEEEEETTSCCEEEEECS------SCS---CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred --CeEEEEcCCCCCeEEEEEC------CCC---CceEEEEeccCCEEEEEECCCCeEEEEecCCCceE
Confidence 1677776543322222111 000 00123222247899998877789999999765433
No 79
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=85.65 E-value=26 Score=34.99 Aligned_cols=196 Identities=8% Similarity=0.003 Sum_probs=95.6
Q ss_pred ecCceEEEEecCCCCeeEEEEcCccccee-cCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEc--
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLS-QLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHI-- 242 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~-~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds-- 242 (453)
+.+|.+++.+.. ...+.++|..|++.. .++. . ....++.+.+++-.+++++.+ ..+.+||.
T Consensus 146 ~p~~~~~vs~~~--d~~V~v~D~~t~~~~~~i~~-g----~~~~~v~~spdg~~l~v~~~d---------~~V~v~D~~~ 209 (543)
T 1nir_A 146 DLPNLFSVTLRD--AGQIALVDGDSKKIVKVIDT-G----YAVHISRMSASGRYLLVIGRD---------ARIDMIDLWA 209 (543)
T ss_dssp CGGGEEEEEEGG--GTEEEEEETTTCCEEEEEEC-S----TTEEEEEECTTSCEEEEEETT---------SEEEEEETTS
T ss_pred CCCCEEEEEEcC--CCeEEEEECCCceEEEEEec-C----cccceEEECCCCCEEEEECCC---------CeEEEEECcC
Confidence 346777766543 247888999887643 2221 1 112345566655566666542 24577877
Q ss_pred ccCCCCCcccccCCCCCcccCCCCCeEEE-----CC-EEEEEecCCCEEEEEECCCCcEEE-eecCCcc-----cc-C-C
Q 045071 243 DAGGFFSLWGTTSSLPRLCSLESGRMVQV-----NG-KFYCMNYSPFSVLAYDISANAWFN-IQAPMRR-----FL-R-S 308 (453)
Q Consensus 243 ~~~~~~~~W~~~~~~p~~~~~~~~~~v~~-----~G-~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~~~-----~~-~-~ 308 (453)
.+ .. .+..++.... ....++. +| .+|+..+....|.++|..+.+-.. +...... .. . .
T Consensus 210 ~t----~~--~~~~i~~g~~--p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~ 281 (543)
T 1nir_A 210 KE----PT--KVAEIKIGIE--ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPR 281 (543)
T ss_dssp SS----CE--EEEEEECCSE--EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCC
T ss_pred CC----Cc--EEEEEecCCC--cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCc
Confidence 44 22 1111111000 0112332 45 577776655789999998865433 3221100 00 0 1
Q ss_pred -Cceee-eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCC
Q 045071 309 -PSLLD-SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGS 386 (453)
Q Consensus 309 -~~lv~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~ 386 (453)
..++. -+++.+++..... ..+.+|.+.. .+-.++..++.. .....+.....|.++|+.....
T Consensus 282 v~~i~~s~~~~~~~vs~~~~------g~i~vvd~~~--~~~l~~~~i~~~--------~~~~~~~~spdg~~l~va~~~~ 345 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVKET------GKVLLVNYKD--IDNLTVTSIGAA--------PFLHDGGWDSSHRYFMTAANNS 345 (543)
T ss_dssp EEEEEECSSSSEEEEEETTT------TEEEEEECTT--SSSCEEEEEECC--------SSCCCEEECTTSCEEEEEEGGG
T ss_pred eEEEEECCCCCEEEEEECCC------CeEEEEEecC--CCcceeEEeccC--------cCccCceECCCCCEEEEEecCC
Confidence 12333 2355555554221 2344454433 222223333210 0011233334567787776667
Q ss_pred CeEEEEECCCCceEE
Q 045071 387 DKALLFDLCMKSWQW 401 (453)
Q Consensus 387 ~~v~~Yd~~~~~W~~ 401 (453)
+.+.++|..+++...
T Consensus 346 ~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 346 NKVAVIDSKDRRLSA 360 (543)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CeEEEEECCCCeEEE
Confidence 889999999887544
No 80
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=85.63 E-value=16 Score=33.44 Aligned_cols=117 Identities=11% Similarity=0.212 Sum_probs=60.8
Q ss_pred CCEEEEEecCCCEEEEEECCCC--cEEEeecCC-----ccccCCC-ceeee--CCeEEEEEEEeccCCCCCCcEEEEEee
Q 045071 272 NGKFYCMNYSPFSVLAYDISAN--AWFNIQAPM-----RRFLRSP-SLLDS--NGKLILVAAVEKSKLNVPKSLRLWSLQ 341 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~-----~~~~~~~-~lv~~--~g~L~vv~~~~~~~~~~~~~i~vw~ld 341 (453)
+|.+|+.......|..||+... .-..+..+. ......+ .++.. +|+||+...... . .|++++
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~------~--~I~~~~ 172 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN------S--RIVQFS 172 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC------C--EEEEEC
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC------C--eEEEEc
Confidence 5889988776678999999765 233332211 1112223 23332 689998663111 1 555556
Q ss_pred cCCCCeEE-EeecCHHH---HHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 342 ACGTLWAE-IERMPQQL---YAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 342 ~~~~~W~~-v~~mp~~~---~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
.. +.... +..-...- ...+. ....+.....++.||+......+|.+||.++.+..
T Consensus 173 ~~-g~~~~~~~~~g~~~~~~~~~~~---~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~ 231 (329)
T 3fvz_A 173 PS-GKFVTQWGEESSGSSPRPGQFS---VPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFV 231 (329)
T ss_dssp TT-SCEEEEECEECCSSSCCTTEES---CEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE
T ss_pred CC-CCEEEEeccCCCCCCCCCcccC---CCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 43 33322 22111000 00000 00112222234899999877889999999866543
No 81
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=85.34 E-value=35 Score=34.86 Aligned_cols=185 Identities=10% Similarity=0.012 Sum_probs=99.9
Q ss_pred eecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc
Q 045071 165 SSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA 244 (453)
Q Consensus 165 ~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~ 244 (453)
...+|.||+.... ...+..+++-......+-.... ..-.|+++|...-++|++... ...+++++.+.
T Consensus 45 d~~~~~lywtD~~--~~~I~r~~~~g~~~~~v~~~g~---~~P~GlAvD~~~~~LY~tD~~--------~~~I~v~~~dG 111 (628)
T 4a0p_A 45 DVTDNRIYWTDIS--LKTISRAFMNGSALEHVVEFGL---DYPEGMAVDWLGKNLYWADTG--------TNRIEVSKLDG 111 (628)
T ss_dssp ETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSC---SCCCEEEEETTTTEEEEEETT--------TTEEEEEETTS
T ss_pred ECCCCEEEEEECC--CCeEEEEECCCCCcEEEEeCCC---CCcceEEEEeCCCEEEEEECC--------CCEEEEEecCC
Confidence 3457888877543 3467788876544333221111 111267776555578887542 13457777654
Q ss_pred CCCCCcccc-c--CCCCCcccCCCCCeEEE--CCEEEEEecC-CCEEEEEECCCCcEEEeecCCccccCCC-ceee--eC
Q 045071 245 GGFFSLWGT-T--SSLPRLCSLESGRMVQV--NGKFYCMNYS-PFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SN 315 (453)
Q Consensus 245 ~~~~~~W~~-~--~~~p~~~~~~~~~~v~~--~G~lY~~~~~-~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~ 315 (453)
. .+. + ..+.. ....++- +|.|||.... ...|..++++...-+.+-. ....+ .|+. .+
T Consensus 112 ----~-~~~~l~~~~l~~-----P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~----~~~~P~GlalD~~~ 177 (628)
T 4a0p_A 112 ----Q-HRQVLVWKDLDS-----PRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP----NVGRANGLTIDYAK 177 (628)
T ss_dssp ----T-TCEEEECSSCCC-----EEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC----SCSSEEEEEEETTT
T ss_pred ----C-cEEEEEeCCCCC-----cccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC----CCCCcceEEEcccc
Confidence 2 221 1 11111 0223333 6999998743 4689999998776555421 12223 2332 25
Q ss_pred CeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECC
Q 045071 316 GKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLC 395 (453)
Q Consensus 316 g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~ 395 (453)
++||++.. .. . .|+.++.+...=+.+... ...++.....++.||+.....+.|...|..
T Consensus 178 ~~LY~aD~--~~-----~--~I~~~d~dG~~~~v~~~~------------l~~P~glav~~~~ly~tD~~~~~I~~~dk~ 236 (628)
T 4a0p_A 178 RRLYWTDL--DT-----N--LIESSNMLGLNREVIADD------------LPHPFGLTQYQDYIYWTDWSRRSIERANKT 236 (628)
T ss_dssp TEEEEEET--TT-----T--EEEEEETTSCSCEEEEEC------------CSCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred CEEEEEEC--CC-----C--EEEEEcCCCCceEEeecc------------CCCceEEEEECCEEEEecCCCCEEEEEECC
Confidence 89998663 21 1 566666542211222211 112444444678999988767888888876
Q ss_pred CC
Q 045071 396 MK 397 (453)
Q Consensus 396 ~~ 397 (453)
+.
T Consensus 237 tg 238 (628)
T 4a0p_A 237 SG 238 (628)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 82
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=85.30 E-value=22 Score=32.51 Aligned_cols=139 Identities=12% Similarity=0.169 Sum_probs=61.0
Q ss_pred eeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCc
Q 045071 181 KTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRL 260 (453)
Q Consensus 181 ~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~ 260 (453)
..+.+||..++++..+..+... .....++...++.-.++..+.+ -...+|+..+ +.+.....+...
T Consensus 30 ~~v~i~~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~~~~~d---------g~i~vwd~~~----~~~~~~~~~~~~ 95 (372)
T 1k8k_C 30 HEVHIYEKSGNKWVQVHELKEH-NGQVTGVDWAPDSNRIVTCGTD---------RNAYVWTLKG----RTWKPTLVILRI 95 (372)
T ss_dssp SEEEEEEEETTEEEEEEEEECC-SSCEEEEEEETTTTEEEEEETT---------SCEEEEEEET----TEEEEEEECCCC
T ss_pred CEEEEEeCCCCcEEeeeeecCC-CCcccEEEEeCCCCEEEEEcCC---------CeEEEEECCC----CeeeeeEEeecC
Confidence 3677888877754333222211 1123344444443344443332 2457788777 555433211110
Q ss_pred ccCCCCCeEEE-CCEEEEEecCCCEEEEEECCCCc-EEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEE
Q 045071 261 CSLESGRMVQV-NGKFYCMNYSPFSVLAYDISANA-WFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLR 336 (453)
Q Consensus 261 ~~~~~~~~v~~-~G~lY~~~~~~~~i~~yD~~~~~-W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~ 336 (453)
.. .-....+. +|...+.+.....+..||+.+.+ |...............-+. -++++++++... ..+.
T Consensus 96 ~~-~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------g~i~ 167 (372)
T 1k8k_C 96 NR-AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-------FKCR 167 (372)
T ss_dssp SS-CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT-------SCEE
T ss_pred CC-ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC-------CCEE
Confidence 00 00111221 34444444444568888887654 3322111111111111122 256766665422 2578
Q ss_pred EEEee
Q 045071 337 LWSLQ 341 (453)
Q Consensus 337 vw~ld 341 (453)
+|.+.
T Consensus 168 ~~d~~ 172 (372)
T 1k8k_C 168 IFSAY 172 (372)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 89864
No 83
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=85.28 E-value=12 Score=33.93 Aligned_cols=106 Identities=17% Similarity=0.162 Sum_probs=63.1
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCcee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
+|.+|+.......|..||++...-..+..+ . .-..++ .-+|+||+...... ...|++++..+++.+.+
T Consensus 42 ~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~--~--~p~gia~~~dG~l~vad~~~~-------~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 42 DGTIFVTNHEVGEIVSITPDGNQQIHATVE--G--KVSGLAFTSNGDLVATGWNAD-------SIPVVSLVKSDGTVETL 110 (306)
T ss_dssp TSCEEEEETTTTEEEEECTTCCEEEEEECS--S--EEEEEEECTTSCEEEEEECTT-------SCEEEEEECTTSCEEEE
T ss_pred CCCEEEEeCCCCeEEEECCCCceEEEEeCC--C--CceeEEEcCCCcEEEEeccCC-------cceEEEEcCCCCeEEEE
Confidence 688999986667899999987533222222 1 111233 34688887553211 23688888667777766
Q ss_pred eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCC
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
..++.. .+. .+ .+...++.+|+.....+.++++|..+.
T Consensus 111 ~~~~~~---~~~-----~g-~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 111 LTLPDA---IFL-----NG-ITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EECTTC---SCE-----EE-EEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EeCCCc---ccc-----Cc-ccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 665431 000 01 122346678887655678999998764
No 84
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=85.09 E-value=20 Score=31.75 Aligned_cols=147 Identities=10% Similarity=0.134 Sum_probs=75.4
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
..+|.+++.... ...+.++|+-.+....+.... ......++.++++. +++++... .....+|+...
T Consensus 129 ~~~g~l~v~~~~--~~~i~~~~~~g~~~~~~~~~~--~~~~p~~i~~~~~g-~l~v~~~~--------~~~i~~~~~~g- 194 (286)
T 1q7f_A 129 DNKGRIIVVECK--VMRVIIFDQNGNVLHKFGCSK--HLEFPNGVVVNDKQ-EIFISDNR--------AHCVKVFNYEG- 194 (286)
T ss_dssp CTTSCEEEEETT--TTEEEEECTTSCEEEEEECTT--TCSSEEEEEECSSS-EEEEEEGG--------GTEEEEEETTC-
T ss_pred eCCCCEEEEECC--CCEEEEEcCCCCEEEEeCCCC--ccCCcEEEEECCCC-CEEEEECC--------CCEEEEEcCCC-
Confidence 446767666432 247889998655444432211 11122356666544 46665432 13457777644
Q ss_pred CCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCC-EEEEEECCCCcEEEeecCCccccCCC-cee-eeCCeEEE
Q 045071 246 GFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPF-SVLAYDISANAWFNIQAPMRRFLRSP-SLL-DSNGKLIL 320 (453)
Q Consensus 246 ~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~-~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv-~~~g~L~v 320 (453)
..-..+..... ......+.+ +|.+|+...... .|..||........+...... ..+ .++ .-+|+||+
T Consensus 195 ---~~~~~~~~~g~---~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~--~~~~~i~~~~~g~l~v 266 (286)
T 1q7f_A 195 ---QYLRQIGGEGI---TNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQLISALESKVKH--AQCFDVALMDDGSVVL 266 (286)
T ss_dssp ---CEEEEESCTTT---SCSEEEEEECTTCCEEEEECSSSCEEEEECTTSCEEEEEEESSCC--SCEEEEEEETTTEEEE
T ss_pred ---CEEEEEccCCc---cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCCEEEEEcccCCC--CcceeEEECCCCcEEE
Confidence 32222211100 011112333 588888876554 899999876655555332211 111 232 34789887
Q ss_pred EEEEeccCCCCCCcEEEEEeec
Q 045071 321 VAAVEKSKLNVPKSLRLWSLQA 342 (453)
Q Consensus 321 v~~~~~~~~~~~~~i~vw~ld~ 342 (453)
.. .+ ..+.||++..
T Consensus 267 s~--~~------~~v~v~~~~~ 280 (286)
T 1q7f_A 267 AS--KD------YRLYIYRYVQ 280 (286)
T ss_dssp EE--TT------TEEEEEECSC
T ss_pred EC--CC------CeEEEEEccc
Confidence 63 22 3678898754
No 85
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=84.65 E-value=38 Score=34.63 Aligned_cols=176 Identities=10% Similarity=-0.006 Sum_probs=92.1
Q ss_pred eEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcc
Q 045071 182 TLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLC 261 (453)
Q Consensus 182 ~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~ 261 (453)
.+...+.-+.....+-+.. .....+++.++...-+||++.... .....++.+. ...+.+....
T Consensus 16 ~I~~i~l~~~~~~~~~~~~--~~~~~~~l~~d~~~~~lywtD~~~--------~~I~r~~~~g----~~~~~v~~~g--- 78 (628)
T 4a0p_A 16 DIRRISLETNNNNVAIPLT--GVKEASALDFDVTDNRIYWTDISL--------KTISRAFMNG----SALEHVVEFG--- 78 (628)
T ss_dssp EEEEEESSCTTCEEECCCC--SCSCEEEEEEETTTTEEEEEETTT--------TEEEEEETTS----CSCEEEECSS---
T ss_pred cEEEEECCCCCcceEEEcC--CCCceEEEEEECCCCEEEEEECCC--------CeEEEEECCC----CCcEEEEeCC---
Confidence 4556666554432222221 122345788877666888875421 2334455544 3333332111
Q ss_pred cCCCCCeEEE---CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCCCcE
Q 045071 262 SLESGRMVQV---NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVPKSL 335 (453)
Q Consensus 262 ~~~~~~~v~~---~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~~~i 335 (453)
.....++.+ +|.|||.......|.++|++...-+.+.. .....+ .|+. .+|.||+... ... -
T Consensus 79 -~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~---~~l~~P~~iavdp~~G~lY~tD~-g~~-------~ 146 (628)
T 4a0p_A 79 -LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW---KDLDSPRALALDPAEGFMYWTEW-GGK-------P 146 (628)
T ss_dssp -CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC---SSCCCEEEEEEETTTTEEEEEEC-SSS-------C
T ss_pred -CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe---CCCCCcccEEEccCCCeEEEeCC-CCC-------C
Confidence 111223333 68999998877899999998754333321 112223 3443 3689997542 111 1
Q ss_pred EEEEeecCCCCeEEEe-ecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCC
Q 045071 336 RLWSLQACGTLWAEIE-RMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 336 ~vw~ld~~~~~W~~v~-~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
+|++.+.+...-+.+. .+.. ..++..-..+++||+.......|.++|+...
T Consensus 147 ~I~r~~~dG~~~~~l~~~~~~-----------P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 147 KIDRAAMDGSERTTLVPNVGR-----------ANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp EEEEEETTSCSCEEEECSCSS-----------EEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred EEEEEeCCCCceEEEECCCCC-----------cceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 6777666444333322 1110 0122222346888888776778888888654
No 86
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=84.52 E-value=21 Score=31.52 Aligned_cols=216 Identities=10% Similarity=0.079 Sum_probs=105.6
Q ss_pred eeeeCCCCCeEeccCCCCCCCC-eeeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceE
Q 045071 140 YLFDPHELSWYRISFALVPSEF-SPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVD 218 (453)
Q Consensus 140 ~~fdp~~~~w~~l~l~~lp~~~-~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~yk 218 (453)
..||+. +++..+.++...... .+....+|.+++.... ...++++|+. ++...+.... . .....++..+++. +
T Consensus 39 ~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~~-g~~~~~~~~~-~-~~~~~~i~~~~~g-~ 111 (299)
T 2z2n_A 39 SCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA--ANKIGRITKK-GIIKEYTLPN-P-DSAPYGITEGPNG-D 111 (299)
T ss_dssp EEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSS-T-TCCEEEEEECTTS-C
T ss_pred EEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC--CCeEEEECCC-CcEEEEeCCC-c-CCCceeeEECCCC-C
Confidence 467777 666555433211122 2333456777766432 2368889986 4443332111 1 1122356666543 4
Q ss_pred EEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEE
Q 045071 219 VTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 219 vv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~ 296 (453)
+++..... ....+|+. + +...... .+. .......+.. +|.+|+.......|..||+ +++..
T Consensus 112 l~v~~~~~--------~~i~~~d~-~----g~~~~~~-~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 112 IWFTEMNG--------NRIGRITD-D----GKIREYE-LPN--KGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp EEEEETTT--------TEEEEECT-T----CCEEEEE-CSS--TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred EEEEecCC--------ceEEEECC-C----CCEEEec-CCC--CCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 55543211 12345555 3 3333221 110 0000112333 5788887765578999999 77776
Q ss_pred EeecCCccccCCC-ceee-eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEE-E
Q 045071 297 NIQAPMRRFLRSP-SLLD-SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDT-I 373 (453)
Q Consensus 297 ~i~~p~~~~~~~~-~lv~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~-~ 373 (453)
.+..+.. ...+ .++. -+|+||+... .. . .|+.++. ++....+ .++.. ......+ +
T Consensus 175 ~~~~~~~--~~~~~~i~~~~~g~l~v~~~--~~-----~--~i~~~~~-~g~~~~~-~~~~~---------~~~~~~i~~ 232 (299)
T 2z2n_A 175 EFKIPTP--ASGPVGITKGNDDALWFVEI--IG-----N--KIGRITT-SGEITEF-KIPTP---------NARPHAITA 232 (299)
T ss_dssp EEECSST--TCCEEEEEECTTSSEEEEET--TT-----T--EEEEECT-TCCEEEE-ECSST---------TCCEEEEEE
T ss_pred EeeCCCC--CCcceeEEECCCCCEEEEcc--CC-----c--eEEEECC-CCcEEEE-ECCCC---------CCCceeEEE
Confidence 6533321 1222 2332 3688887542 11 1 5667777 5555543 22210 0112222 2
Q ss_pred eeCCEEEEEEcCCCeEEEEECCCCceEEc
Q 045071 374 GHGEFIVIVIRGSDKALLFDLCMKSWQWI 402 (453)
Q Consensus 374 ~~g~~I~l~~~~~~~v~~Yd~~~~~W~~l 402 (453)
..++.||+.....+.+..||+ +++...+
T Consensus 233 ~~~g~l~v~~~~~~~i~~~d~-~g~~~~~ 260 (299)
T 2z2n_A 233 GAGIDLWFTEWGANKIGRLTS-NNIIEEY 260 (299)
T ss_dssp CSTTCEEEEETTTTEEEEEET-TTEEEEE
T ss_pred CCCCCEEEeccCCceEEEECC-CCceEEE
Confidence 234568887655688999999 4554443
No 87
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=83.43 E-value=23 Score=31.21 Aligned_cols=215 Identities=12% Similarity=0.079 Sum_probs=104.6
Q ss_pred eeeeCCCCCeEeccCCCCCCC-CeeeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceE
Q 045071 140 YLFDPHELSWYRISFALVPSE-FSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVD 218 (453)
Q Consensus 140 ~~fdp~~~~w~~l~l~~lp~~-~~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~yk 218 (453)
..||+. .+...+.++..... ..+....+|.+++.... ...++++|+. ++...+...... ....++..++.. +
T Consensus 44 ~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~--~~~v~~~d~~-g~~~~~~~~~~~--~~~~~i~~~~~g-~ 116 (300)
T 2qc5_A 44 SSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG--ANKIGKLSKK-GGFTEYPLPQPD--SGPYGITEGLNG-D 116 (300)
T ss_dssp EEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSSTT--CCEEEEEECSTT-C
T ss_pred EEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC--CCeEEEECCC-CCeEEecCCCCC--CCCccceECCCC-C
Confidence 467777 66655443311111 22333456777765432 2368899988 665543221111 122355555433 4
Q ss_pred EEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEE
Q 045071 219 VTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 219 vv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~ 296 (453)
+++..... .....|+.+. ...... ++. .......+.+ +|.+|+.......|..||+ ++++.
T Consensus 117 l~v~~~~~--------~~i~~~~~~g-----~~~~~~-~~~--~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 117 IWFTQLNG--------DRIGKLTADG-----TIYEYD-LPN--KGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp EEEEETTT--------TEEEEECTTS-----CEEEEE-CSS--TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred EEEEccCC--------CeEEEECCCC-----CEEEcc-CCC--CCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 55543211 1224444431 111111 111 0000112333 5788887765578999999 66666
Q ss_pred EeecCCccccCCC-ceee-eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEE-EE
Q 045071 297 NIQAPMRRFLRSP-SLLD-SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFD-TI 373 (453)
Q Consensus 297 ~i~~p~~~~~~~~-~lv~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~-~~ 373 (453)
.+..+.. ...+ .++. -+|+||+... ... .|+.++. .+.+..+. ++.. . ..... ++
T Consensus 180 ~~~~~~~--~~~~~~i~~d~~g~l~v~~~--~~~-------~i~~~~~-~g~~~~~~-~~~~----~-----~~~~~i~~ 237 (300)
T 2qc5_A 180 EYPLPTN--AAAPVGITSGNDGALWFVEI--MGN-------KIGRITT-TGEISEYD-IPTP----N-----ARPHAITA 237 (300)
T ss_dssp EEECSST--TCCEEEEEECTTSSEEEEET--TTT-------EEEEECT-TCCEEEEE-CSST----T-----CCEEEEEE
T ss_pred EeeCCCC--CCCcceEEECCCCCEEEEcc--CCC-------EEEEEcC-CCcEEEEE-CCCC----C-----CCceEEEE
Confidence 5543321 1222 2332 3688887542 111 5677776 45555432 2310 0 11222 22
Q ss_pred eeCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 374 GHGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 374 ~~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
..++.||+.....+.+..||+. ++...
T Consensus 238 d~~g~l~v~~~~~~~i~~~~~~-g~~~~ 264 (300)
T 2qc5_A 238 GKNSEIWFTEWGANQIGRITND-NTIQE 264 (300)
T ss_dssp CSTTCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CCCCCEEEeccCCCeEEEECCC-CcEEE
Confidence 2345688887656889999994 55543
No 88
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=82.97 E-value=29 Score=31.94 Aligned_cols=186 Identities=15% Similarity=0.110 Sum_probs=96.1
Q ss_pred cCceEEEEecCCCCeeEEEEcCcccce---ecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcc
Q 045071 167 SGGLVCWVSDHAGAKTLILCNPVTGSL---SQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHID 243 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP~T~~w---~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~ 243 (453)
..|.||+.... ...+.++++-+... .....+. ...|+.++...-++|+.... ....++++.+
T Consensus 45 ~~~~lyw~D~~--~~~I~r~~~~g~~~~~~~~~~~l~-----~p~glavd~~~g~ly~~d~~--------~~~I~~~~~d 109 (318)
T 3sov_A 45 SHGLIYWSDVS--EEAIKRTEFNKTESVQNVVVSGLL-----SPDGLACDWLGEKLYWTDSE--------TNRIEVSNLD 109 (318)
T ss_dssp GGTEEEEEETT--TTEEEEEETTSSSCCCEEEEECCS-----CCCEEEEETTTTEEEEEETT--------TTEEEEEETT
T ss_pred CCCEEEEEECC--CCcEEEEEccCCCceEEEEcCCCC-----CccEEEEEcCCCeEEEEECC--------CCEEEEEECC
Confidence 45777776533 34678888766521 1111111 11256666544567776432 1244677665
Q ss_pred cCCCCCcccccCCCCCcccCCCCCeEEE---CCEEEEEecC-CCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCC
Q 045071 244 AGGFFSLWGTTSSLPRLCSLESGRMVQV---NGKFYCMNYS-PFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNG 316 (453)
Q Consensus 244 ~~~~~~~W~~~~~~p~~~~~~~~~~v~~---~G~lY~~~~~-~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g 316 (453)
. ..=+.+..- .......+.+ +|.+||.... ...|..+|++...-+.+-.. ....+ .|+. .++
T Consensus 110 G----~~~~~l~~~----~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~---~l~~Pnglavd~~~~ 178 (318)
T 3sov_A 110 G----SLRKVLFWQ----ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS---EIYWPNGLTLDYEEQ 178 (318)
T ss_dssp S----CSCEEEECS----SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS---SCSCEEEEEEETTTT
T ss_pred C----CcEEEEEeC----CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC---CCCCccEEEEeccCC
Confidence 4 211111110 0111122333 5899998743 46899999986543333111 11222 3433 378
Q ss_pred eEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCC
Q 045071 317 KLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 317 ~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
+||++.. .. . .|+.++.+...-+.+.. . ....++.....++.+|......+.|..+|..+
T Consensus 179 ~lY~aD~--~~-----~--~I~~~d~dG~~~~~~~~--~---------~~~~P~glav~~~~lywtd~~~~~V~~~~~~~ 238 (318)
T 3sov_A 179 KLYWADA--KL-----N--FIHKSNLDGTNRQAVVK--G---------SLPHPFALTLFEDILYWTDWSTHSILACNKYT 238 (318)
T ss_dssp EEEEEET--TT-----T--EEEEEETTSCSCEEEEC--S---------CCSCEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEC--CC-----C--EEEEEcCCCCceEEEec--C---------CCCCceEEEEeCCEEEEEecCCCeEEEEECCC
Confidence 8998653 21 1 56666654332223321 0 01124444446889999877778999999965
Q ss_pred Cc
Q 045071 397 KS 398 (453)
Q Consensus 397 ~~ 398 (453)
.+
T Consensus 239 G~ 240 (318)
T 3sov_A 239 GE 240 (318)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 89
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=82.37 E-value=11 Score=38.01 Aligned_cols=116 Identities=14% Similarity=0.202 Sum_probs=65.1
Q ss_pred CeEEECCEEEEEecCCCEEEEEEC-CCC--cEEEeecCCccc--------cCCCceeeeCCeEEEEEEEeccCCCCCCcE
Q 045071 267 RMVQVNGKFYCMNYSPFSVLAYDI-SAN--AWFNIQAPMRRF--------LRSPSLLDSNGKLILVAAVEKSKLNVPKSL 335 (453)
Q Consensus 267 ~~v~~~G~lY~~~~~~~~i~~yD~-~~~--~W~~i~~p~~~~--------~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i 335 (453)
.+++.+|++|+.+.....|.++|. +++ .|+.- .+.... .....++..+++||+... +.
T Consensus 57 ~P~v~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--dg-------- 125 (571)
T 2ad6_A 57 APLVIGDMMYVHSAFPNNTYALNLNDPGKIVWQHK-PKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA--NG-------- 125 (571)
T ss_dssp CCEEETTEEEEECSTTTCEEEEETTCTTSEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--TS--------
T ss_pred ccEEECCEEEEEeCCCCEEEEEeCCCCccEEEEEc-CCCCccccccccccccccccEEECCEEEEEeC--CC--------
Confidence 457889999998762367999999 765 58653 221110 011234556888886431 11
Q ss_pred EEEEeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCc--eEE
Q 045071 336 RLWSLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKS--WQW 401 (453)
Q Consensus 336 ~vw~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~--W~~ 401 (453)
.|+.+|.. ...|+.- ++..- ... .. .... +..++.||+.... .+.+.+||.++.+ |+.
T Consensus 126 ~l~alD~~tG~~~W~~~--~~~~~-~~~-~~-~~~P---~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVE--VCDPK-VGS-TL-TQAP---FVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp EEEEEETTTCCEEEEEE--CCCGG-GTC-BC-CSCC---EEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCCEEEEec--CCCCC-ccc-ee-ccCC---EEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 67778864 3457642 22100 000 00 0011 1247888886542 4789999999875 543
No 90
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=81.86 E-value=30 Score=31.37 Aligned_cols=28 Identities=11% Similarity=-0.073 Sum_probs=21.7
Q ss_pred eeCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 374 GHGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 374 ~~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
..|+.+|+.....+.+.+||+.+.+...
T Consensus 240 ~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 240 TARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp TTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 3578898887667899999998876543
No 91
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=81.70 E-value=11 Score=39.00 Aligned_cols=116 Identities=20% Similarity=0.224 Sum_probs=64.7
Q ss_pred CeEEECCEEEEEecCCCEEEEEECCCC--cEEEeecCCcc-c-------cCCCceeeeCCeEEEEEEEeccCCCCCCcEE
Q 045071 267 RMVQVNGKFYCMNYSPFSVLAYDISAN--AWFNIQAPMRR-F-------LRSPSLLDSNGKLILVAAVEKSKLNVPKSLR 336 (453)
Q Consensus 267 ~~v~~~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~~~-~-------~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~ 336 (453)
..++.+|++|+.+.. ..|.++|.+++ .|+.- ...+. . .....++..+++||+... +. .
T Consensus 72 ~P~v~~g~vyv~~~~-~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--dg--------~ 139 (677)
T 1kb0_A 72 TPVVVDGIMYVSASW-SVVHAIDTRTGNRIWTYD-PQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--DG--------R 139 (677)
T ss_dssp CCEEETTEEEEECGG-GCEEEEETTTTEEEEEEC-CCCCGGGGGGSSSCSCCCCCEEETTEEEEECT--TS--------E
T ss_pred CCEEECCEEEEECCC-CeEEEEECCCCcEEEEEc-CCCCccccccccccCCCCCceEECCEEEEEcC--CC--------E
Confidence 457899999998764 57999999876 48653 22110 0 111234456788886421 11 5
Q ss_pred EEEeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCc--eEE
Q 045071 337 LWSLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKS--WQW 401 (453)
Q Consensus 337 vw~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~--W~~ 401 (453)
|+.+|.. ...|+.- +... ......... ..+..++.||+.... .+.+.+||.++.+ |+.
T Consensus 140 l~alD~~tG~~~W~~~--~~~~----~~~~~~~~~-~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~ 206 (677)
T 1kb0_A 140 LIALDAATGKEVWHQN--TFEG----QKGSLTITG-APRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRW 206 (677)
T ss_dssp EEEEETTTCCEEEEEE--TTTT----CCSSCBCCS-CCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEeeec--CCcC----cCcCccccc-CcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEe
Confidence 6777764 3357642 2200 000000000 112247888886432 4689999999876 554
No 92
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=81.60 E-value=22 Score=34.00 Aligned_cols=112 Identities=8% Similarity=0.059 Sum_probs=61.9
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCce-eeeCCe-EEEEEEEeccCCCCCCcEEEEEeecCCC-CeE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSL-LDSNGK-LILVAAVEKSKLNVPKSLRLWSLQACGT-LWA 348 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~l-v~~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~-~W~ 348 (453)
+|.||+.......|..||+.+++-..+..... .+.+ +.-+|+ ||+... .. ...||.++.... ...
T Consensus 141 ~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~----~~~ia~~~~g~~l~~~d~-~~-------~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 141 NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK----GGKPAVTKDKQRVYSIGW-EG-------THTVYVYMKASGWAPT 208 (409)
T ss_dssp TTEEEEEETTTTEEEEEETTTTEEEEEEETCC----BCBCEECTTSSEEEEEBS-ST-------TCEEEEEEGGGTTCEE
T ss_pred CCCEEEEecCCCcEEEEECCCCEEEEeeccCC----CCceeEecCCCcEEEEec-CC-------CceEEEEEcCCCceeE
Confidence 68999998766799999999887766533211 1122 223444 554332 11 116788776422 222
Q ss_pred EEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceEEc
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQWI 402 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~l 402 (453)
.+..++... . .....+.+...++.||+. ...+.+..||++++....+
T Consensus 209 ~~g~~~~~~---~---~~p~~iav~p~~g~lyv~-d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 209 RIGQLGSTF---S---GKIGAVALDETEEWLYFV-DSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEECCTTS---C---SCCCBCEECTTSSEEEEE-CTTCEEEEEETTTCCEEEE
T ss_pred Eeeeccchh---c---CCcEEEEEeCCCCeEEEE-ECCCcEEEEECCCCCEEEE
Confidence 332222100 0 011223333336789985 3367899999998876554
No 93
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=81.35 E-value=24 Score=33.65 Aligned_cols=116 Identities=9% Similarity=0.055 Sum_probs=63.7
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCC---------cccc-CCCceee---eCCeEEEEEEEeccCCCCCCcEEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPM---------RRFL-RSPSLLD---SNGKLILVAAVEKSKLNVPKSLRLW 338 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~---------~~~~-~~~~lv~---~~g~L~vv~~~~~~~~~~~~~i~vw 338 (453)
+|+++|++.. ..+.++|..++.-..+ .+. +... .....+. -+++||+........-+....=+||
T Consensus 237 dG~~~~vs~~-g~V~v~d~~~~~~~v~-~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~ 314 (386)
T 3sjl_D 237 AGRLVWPTYT-GKIHQIDLSSGDAKFL-PAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVV 314 (386)
T ss_dssp TTEEEEEBTT-SEEEEEECTTSSCEEC-CCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEE
T ss_pred CCcEEEEeCC-CEEEEEECCCCcceee-cceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEE
Confidence 7888888775 6899999987642221 110 0000 1112222 3688888764321100011123899
Q ss_pred EeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCC-EEEEEEcCCCeEEEEECCCCce
Q 045071 339 SLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGE-FIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 339 ~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~-~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
++|.. .++.+.+++.. . ....+.....+. ++|..+...+.+.+||..+.+.
T Consensus 315 viD~~--t~kv~~~i~vg------~--~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 315 VLDAK--TGERLAKFEMG------H--EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp EEETT--TCCEEEEEEEE------E--EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred EEECC--CCeEEEEEECC------C--CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcE
Confidence 99964 44445555431 0 001233333443 7888777688999999998764
No 94
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=79.39 E-value=39 Score=31.20 Aligned_cols=104 Identities=8% Similarity=0.064 Sum_probs=50.2
Q ss_pred EEEEecCCCEEEEEECCCCcEEE-eecCCccccCCCceee---eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 275 FYCMNYSPFSVLAYDISANAWFN-IQAPMRRFLRSPSLLD---SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 275 lY~~~~~~~~i~~yD~~~~~W~~-i~~p~~~~~~~~~lv~---~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
+.+.+.....|..||+.+.+-.. +...... .....+. .++++++.+.. + ..++||.+..... +
T Consensus 184 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~l~sg~~-d------g~v~~wd~~~~~~----~ 250 (344)
T 4gqb_B 184 VFLSCSEDNRILLWDTRCPKPASQIGCSAPG--YLPTSLAWHPQQSEVFVFGDE-N------GTVSLVDTKSTSC----V 250 (344)
T ss_dssp EEEEEETTSCEEEEETTSSSCEEECC----C--CCEEEEEECSSCTTEEEEEET-T------SEEEEEESCC--C----C
T ss_pred ceeeeccccccccccccccceeeeeecceee--ccceeeeecCCCCcceEEecc-C------CcEEEEECCCCcE----E
Confidence 33334334678999998865432 2111111 1111122 25667665542 2 2578897653221 2
Q ss_pred eecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
..+.. . ...+.++. .++.+++.....+.+.+||..+++...
T Consensus 251 ~~~~~---------h-~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~ 294 (344)
T 4gqb_B 251 LSSAV---------H-SQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR 294 (344)
T ss_dssp EEEEC---------C-SSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE
T ss_pred EEEcC---------C-CCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE
Confidence 22211 0 01233332 344455555456889999999886543
No 95
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=79.20 E-value=33 Score=30.18 Aligned_cols=193 Identities=12% Similarity=0.098 Sum_probs=96.6
Q ss_pred eeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcc
Q 045071 164 ASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHID 243 (453)
Q Consensus 164 ~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~ 243 (453)
....+|-+++.... ...+.++|+. ++...++.... .....++..++.. ++++..... .....|+..
T Consensus 26 ~~d~~g~l~v~~~~--~~~v~~~~~~-~~~~~~~~~~~--~~~~~~i~~~~~g-~l~v~~~~~--------~~v~~~d~~ 91 (300)
T 2qc5_A 26 TSSEDGKVWFTQHK--ANKISSLDQS-GRIKEFEVPTP--DAKVMCLIVSSLG-DIWFTENGA--------NKIGKLSKK 91 (300)
T ss_dssp EECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSST--TCCEEEEEECTTS-CEEEEETTT--------TEEEEECTT
T ss_pred eECCCCCEEEEcCC--CCeEEEECCC-CceEEEECCCC--CCcceeEEECCCC-CEEEEecCC--------CeEEEECCC
Confidence 33456767665432 2468889988 66554332111 1123356666543 355543211 123455544
Q ss_pred cCCCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee-eCCeEE
Q 045071 244 AGGFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD-SNGKLI 319 (453)
Q Consensus 244 ~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~-~~g~L~ 319 (453)
. .+.... ++.. . .....+.+ +|.+|+.......|..||+. ++......+.. ...+ .++. -+|+||
T Consensus 92 g-----~~~~~~-~~~~-~-~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~--~~~~~~i~~d~~g~l~ 160 (300)
T 2qc5_A 92 G-----GFTEYP-LPQP-D-SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNK--GSYPAFITLGSDNALW 160 (300)
T ss_dssp S-----CEEEEE-CSST-T-CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSST--TCCEEEEEECTTSSEE
T ss_pred C-----CeEEec-CCCC-C-CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCC--CCCceeEEECCCCCEE
Confidence 2 222221 1100 0 00112333 58888877655789999998 66655543321 1222 2332 468888
Q ss_pred EEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEE-EEeeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 320 LVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFD-TIGHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 320 vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~-~~~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
+... ... .|++++. .++...+. ++... ..... ++..++.||+.....+.+.+||. +++
T Consensus 161 v~~~--~~~-------~i~~~~~-~g~~~~~~-~~~~~---------~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 161 FTEN--QNN-------SIGRITN-TGKLEEYP-LPTNA---------AAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp EEET--TTT-------EEEEECT-TCCEEEEE-CSSTT---------CCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred EEec--CCC-------eEEEECC-CCcEEEee-CCCCC---------CCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 7442 111 6777777 55665532 22210 01112 12234578887665678999998 555
Q ss_pred eEEc
Q 045071 399 WQWI 402 (453)
Q Consensus 399 W~~l 402 (453)
+...
T Consensus 220 ~~~~ 223 (300)
T 2qc5_A 220 ISEY 223 (300)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 96
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=78.96 E-value=42 Score=31.40 Aligned_cols=148 Identities=12% Similarity=0.178 Sum_probs=67.4
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
+.+|-+++.+... ..+.++|..+++....-. .......++...+++-.++..+.+ ..+.+||..+
T Consensus 132 s~dg~~l~s~~~d--~~i~iwd~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~s~s~d---------~~v~iwd~~~- 196 (393)
T 1erj_A 132 SPDGKFLATGAED--RLIRIWDIENRKIVMILQ---GHEQDIYSLDYFPSGDKLVSGSGD---------RTVRIWDLRT- 196 (393)
T ss_dssp CTTSSEEEEEETT--SCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTT-
T ss_pred CCCCCEEEEEcCC--CeEEEEECCCCcEEEEEc---cCCCCEEEEEEcCCCCEEEEecCC---------CcEEEEECCC-
Confidence 3455555444332 468889988776432211 111123345555544445444333 2457777766
Q ss_pred CCCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEEE-eecCCc---cccCCCceee--eCCe
Q 045071 246 GFFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWFN-IQAPMR---RFLRSPSLLD--SNGK 317 (453)
Q Consensus 246 ~~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~~---~~~~~~~lv~--~~g~ 317 (453)
+.....-.... .. ....+. +|.+...+.....|..||..+++-.. +..+.. .+.....-+. -+|+
T Consensus 197 ---~~~~~~~~~~~--~v--~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~ 269 (393)
T 1erj_A 197 ---GQCSLTLSIED--GV--TTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQ 269 (393)
T ss_dssp ---TEEEEEEECSS--CE--EEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSS
T ss_pred ---CeeEEEEEcCC--Cc--EEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCC
Confidence 33221111110 00 111222 45555555544678999998876432 211111 1111111122 2577
Q ss_pred EEEEEEEeccCCCCCCcEEEEEeec
Q 045071 318 LILVAAVEKSKLNVPKSLRLWSLQA 342 (453)
Q Consensus 318 L~vv~~~~~~~~~~~~~i~vw~ld~ 342 (453)
+++.+.. + ..++||.+..
T Consensus 270 ~l~s~s~-d------~~v~~wd~~~ 287 (393)
T 1erj_A 270 SVVSGSL-D------RSVKLWNLQN 287 (393)
T ss_dssp EEEEEET-T------SEEEEEEC--
T ss_pred EEEEEeC-C------CEEEEEECCC
Confidence 7665542 2 3689998764
No 97
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=78.73 E-value=14 Score=38.28 Aligned_cols=115 Identities=17% Similarity=0.191 Sum_probs=64.2
Q ss_pred CeEEECCEEEEEecCCCEEEEEECCCC--cEEEeecCCccc--------cCCCceeeeCCeEEEEEEEeccCCCCCCcEE
Q 045071 267 RMVQVNGKFYCMNYSPFSVLAYDISAN--AWFNIQAPMRRF--------LRSPSLLDSNGKLILVAAVEKSKLNVPKSLR 336 (453)
Q Consensus 267 ~~v~~~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~~~~--------~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~ 336 (453)
..++.+|++|+.+.. ..|.++|.+++ .|+.- ...+.. .....++..+++||+.. .+. .
T Consensus 61 ~P~v~~g~vyv~~~~-~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~--~dg--------~ 128 (668)
T 1kv9_A 61 TPLFHDGVIYTSMSW-SRVIAVDAASGKELWRYD-PEVAKVKARTSCCDAVNRGVALWGDKVYVGT--LDG--------R 128 (668)
T ss_dssp CCEEETTEEEEEEGG-GEEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEEEBTEEEEEC--TTS--------E
T ss_pred CCEEECCEEEEECCC-CeEEEEECCCChhceEEC-CCCCccccccccccCCccceEEECCEEEEEc--CCC--------E
Confidence 457899999998765 68999999875 48653 221110 00112344678887633 111 6
Q ss_pred EEEeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCc--eEE
Q 045071 337 LWSLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKS--WQW 401 (453)
Q Consensus 337 vw~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~--W~~ 401 (453)
|+.+|.. +..|+.-..-+.. .... .... +..++.||+.... .+.+.+||.++.+ |+.
T Consensus 129 l~alD~~tG~~~W~~~~~~~~~----~~~~-~~~P---~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTDPAK----PYSI-TGAP---RVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp EEEEETTTCCEEEEEECSCTTS----SCBC-CSCC---EEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeeeccCCCCC----ccee-cCCC---EEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 7777754 3457642211110 0000 0011 2247888875432 3689999999876 554
No 98
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=78.53 E-value=41 Score=30.89 Aligned_cols=109 Identities=11% Similarity=-0.037 Sum_probs=61.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
+|.|||.......|.++|++...-+.+... ....+ .++. .+|.||+... ... -+|++++.+...=+
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~---~~~~P~giavdp~~g~ly~td~-~~~-------~~I~r~~~dG~~~~ 158 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLRKVLFWQ---ELDQPRAIALDPSSGFMYWTDW-GEV-------PKIERAGMDGSSRF 158 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECS---SCSSEEEEEEEGGGTEEEEEEC-SSS-------CEEEEEETTSCSCE
T ss_pred CCeEEEEECCCCEEEEEECCCCcEEEEEeC---CCCCccEEEEeCCCCEEEEEec-CCC-------CEEEEEEcCCCCeE
Confidence 689999987778999999987544333211 11222 2333 3688887542 111 16777776432222
Q ss_pred EEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
.+.. . ++. ...++..-..++.||+......+|.++|++...-+
T Consensus 159 ~~~~--~----~l~---~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 201 (318)
T 3sov_A 159 IIIN--S----EIY---WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ 201 (318)
T ss_dssp EEEC--S----SCS---CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred EEEE--C----CCC---CccEEEEeccCCEEEEEECCCCEEEEEcCCCCceE
Confidence 2211 0 000 00123322347899998777788999998754433
No 99
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=78.10 E-value=49 Score=31.81 Aligned_cols=112 Identities=13% Similarity=0.104 Sum_probs=62.4
Q ss_pred cCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCC
Q 045071 167 SGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGG 246 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~ 246 (453)
.+|.|++.... ..+.++|+.+++...+... ...-.++.+++..-.||++....... ......++..
T Consensus 148 ~~g~Lyv~d~~---~~I~~id~~~~~v~~~~~~----~~~P~~ia~d~~G~~lyvad~~~~~~----~~~v~~~~~~--- 213 (430)
T 3tc9_A 148 NHNHLYLVGEQ---HPTRLIDFEKEYVSTVYSG----LSKVRTICWTHEADSMIITNDQNNND----RPNNYILTRE--- 213 (430)
T ss_dssp EEEEEEEEEBT---EEEEEEETTTTEEEEEECC----CSCEEEEEECTTSSEEEEEECCSCTT----SEEEEEEEGG---
T ss_pred CCCeEEEEeCC---CcEEEEECCCCEEEEEecC----CCCcceEEEeCCCCEEEEEeCCCCcc----cceEEEEeCC---
Confidence 46888877543 5788999988876655331 11223677776655688775422110 1122334433
Q ss_pred CCCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEE
Q 045071 247 FFSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 247 ~~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~ 296 (453)
+.|.....++.. . .....++. +|.||+.......|..||+.+....
T Consensus 214 --g~~~~~~~l~~~-~-~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~ 261 (430)
T 3tc9_A 214 --SGFKVITELTKG-Q-NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT 261 (430)
T ss_dssp --GTSCSEEEEEEC-S-SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE
T ss_pred --CceeeeeeeccC-C-CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 344421111110 1 11223332 6899998877689999999987653
No 100
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=77.34 E-value=44 Score=30.63 Aligned_cols=119 Identities=13% Similarity=0.188 Sum_probs=68.7
Q ss_pred CC-EEEEEecCCCEEEEEECCCCcEEEeec-C-CccccCCC-cee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCC
Q 045071 272 NG-KFYCMNYSPFSVLAYDISANAWFNIQA-P-MRRFLRSP-SLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTL 346 (453)
Q Consensus 272 ~G-~lY~~~~~~~~i~~yD~~~~~W~~i~~-p-~~~~~~~~-~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~ 346 (453)
+| .+|+.......|..||+.++++..+.. + .+.....+ .++ .-+|+.+++..... ...+.||.++..++.
T Consensus 221 dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~-----~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 221 DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLK-----ADGVAIFKVDETNGT 295 (361)
T ss_dssp TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSS-----SCEEEEEEECTTTCC
T ss_pred CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCC-----CCEEEEEEEcCCCCc
Confidence 45 477777555789999998887755421 1 11111112 222 23676544443220 136899999876777
Q ss_pred eEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEE--ECCCCceEEcC
Q 045071 347 WAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLF--DLCMKSWQWIP 403 (453)
Q Consensus 347 W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Y--d~~~~~W~~l~ 403 (453)
++.+..++.. .....+.....|..||+.....+.+.+| |.++++.+.+.
T Consensus 296 ~~~~~~~~~g--------~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~ 346 (361)
T 3scy_A 296 LTKVGYQLTG--------IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIK 346 (361)
T ss_dssp EEEEEEEECS--------SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECS
T ss_pred EEEeeEecCC--------CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecc
Confidence 8777665420 0112333344577888887656777774 66677776664
No 101
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=77.16 E-value=67 Score=32.68 Aligned_cols=190 Identities=13% Similarity=0.102 Sum_probs=100.1
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
..+|.||+.... ...++.+++-......+-.-. ...-.|+++|..+-++|+.... ...+++.+.+.
T Consensus 358 ~~~~~ly~sD~~--~~~I~r~~~~g~~~~~v~~~~---~~~p~GlAvD~~~~~lY~tD~~--------~~~I~v~~~~G- 423 (619)
T 3s94_A 358 PVEGYIYWTDDE--VRAIRRSFIDGSGSQFVVTAQ---IAHPDGIAVDWVARNLYWTDTG--------TDRIEVTRLNG- 423 (619)
T ss_dssp TTTTEEEEEETT--TTEEEEEETTSCSCEEEECSS---CSCCCEEEEETTTTEEEEEETT--------TTEEEEEETTS-
T ss_pred cCCCeEEEEeCC--CCeEEEEEcCCCccEEEEECC---CCCcCceEEecccCcEEEEeCC--------CCcEEEEeCCC-
Confidence 457888887543 346888888764443332111 1111266776544577876432 23457776654
Q ss_pred CCCCcccccCCCCCcccCCC-CCeEEE--CCEEEEEecC-CCEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeE
Q 045071 246 GFFSLWGTTSSLPRLCSLES-GRMVQV--NGKFYCMNYS-PFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKL 318 (453)
Q Consensus 246 ~~~~~W~~~~~~p~~~~~~~-~~~v~~--~G~lY~~~~~-~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L 318 (453)
..-+.+..- .+.. ...++. +|.+||.... ...|..++++...-..+.. .....+ .|+. .+++|
T Consensus 424 ---~~~~~l~~~----~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~---~~l~~P~GlalD~~~~~L 493 (619)
T 3s94_A 424 ---TMRKILISE----DLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVN---TSLGWPNGLALDYDEGKI 493 (619)
T ss_dssp ---CSCEEEECT----TCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC---SSCSCEEEEEEETTTTEE
T ss_pred ---CeEEEEEEC----CCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEe---CCCCCCeeeEEcccCCEE
Confidence 222222110 1111 223333 5999998753 3589999887654333311 112222 2332 36899
Q ss_pred EEEEEEeccCCCCCCcEEEEEeecCCCCeEEEee--cCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCC
Q 045071 319 ILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIER--MPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 319 ~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~--mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
|++.. .. . +|+.++.+...=+.+.. +. .++.....++.||+.....+.|...|..+
T Consensus 494 Y~aD~--~~-----~--~I~~~~~dG~~~~~~~~~~l~-------------~P~glav~~~~ly~tD~~~~~I~~~~k~~ 551 (619)
T 3s94_A 494 YWGDA--KT-----D--KIEVMNTDGTGRRVLVEDKIP-------------HIFGFTLLGDYVYWTDWQRRSIERVHKRS 551 (619)
T ss_dssp EEEET--TT-----T--EEEEEESSSCCCEEEEECCCC-------------SSCCEEEETTEEEEECTTSSCEEEEESSS
T ss_pred EEEEC--CC-----C--EEEEEecCCCceEEEeccCCC-------------CcEEEEEECCEEEEeecCCCeEEEEEcCC
Confidence 98653 21 1 56666653222222221 21 23333446789999877678888898888
Q ss_pred CceEE
Q 045071 397 KSWQW 401 (453)
Q Consensus 397 ~~W~~ 401 (453)
..-+.
T Consensus 552 g~~~~ 556 (619)
T 3s94_A 552 AEREV 556 (619)
T ss_dssp CCEEE
T ss_pred CceEE
Confidence 74433
No 102
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=76.48 E-value=42 Score=29.94 Aligned_cols=193 Identities=10% Similarity=0.111 Sum_probs=86.2
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceec-CCCCCC-CCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcc
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQ-LPPTLR-PRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHID 243 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~-LP~~~~-~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~ 243 (453)
+.+|-+++.+. ...+.+||..+++... +..... ........+...++...++..+.+ ....+|+..
T Consensus 60 ~~~~~~l~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~~~d~~ 127 (337)
T 1gxr_A 60 SNPTRHVYTGG---KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA---------STLSIWDLA 127 (337)
T ss_dssp CSSSSEEEEEC---BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS---------SEEEEEECC
T ss_pred ecCCcEEEEcC---CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC---------CcEEEEECC
Confidence 34454444443 2478888887654221 111110 111223345555544444444332 245778877
Q ss_pred cCCCCCcccccCCCCCcccCCCCCeEEE-CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEE
Q 045071 244 AGGFFSLWGTTSSLPRLCSLESGRMVQV-NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLIL 320 (453)
Q Consensus 244 ~~~~~~~W~~~~~~p~~~~~~~~~~v~~-~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~v 320 (453)
+ ........+..... .-....+. +|...+.+.....|..||+.+.+....-.. ......-+. -+|++++
T Consensus 128 ~----~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 128 A----PTPRIKAELTSSAP-ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG---HTDGASCIDISNDGTKLW 199 (337)
T ss_dssp C----C--EEEEEEECSSS-CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC---CSSCEEEEEECTTSSEEE
T ss_pred C----CCcceeeecccCCC-ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec---ccCceEEEEECCCCCEEE
Confidence 6 44322211110000 00011222 454444444446799999998765332111 111111222 2566666
Q ss_pred EEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEE---eeCCEEEEEEcCCCeEEEEECCCC
Q 045071 321 VAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTI---GHGEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 321 v~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~---~~g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
++... ..+.+|.++. . +.+..+.. ...+.++ ..++.+++. ...+.+.+||+.+.
T Consensus 200 ~~~~d-------g~i~~~d~~~--~--~~~~~~~~-----------~~~v~~~~~s~~~~~l~~~-~~~~~i~~~~~~~~ 256 (337)
T 1gxr_A 200 TGGLD-------NTVRSWDLRE--G--RQLQQHDF-----------TSQIFSLGYCPTGEWLAVG-MESSNVEVLHVNKP 256 (337)
T ss_dssp EEETT-------SEEEEEETTT--T--EEEEEEEC-----------SSCEEEEEECTTSSEEEEE-ETTSCEEEEETTSS
T ss_pred EEecC-------CcEEEEECCC--C--ceEeeecC-----------CCceEEEEECCCCCEEEEE-cCCCcEEEEECCCC
Confidence 65421 2567886653 2 22222211 0112222 235555544 34678999999887
Q ss_pred ceEE
Q 045071 398 SWQW 401 (453)
Q Consensus 398 ~W~~ 401 (453)
+-..
T Consensus 257 ~~~~ 260 (337)
T 1gxr_A 257 DKYQ 260 (337)
T ss_dssp CEEE
T ss_pred CeEE
Confidence 6443
No 103
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=76.44 E-value=14 Score=34.15 Aligned_cols=135 Identities=13% Similarity=0.148 Sum_probs=56.2
Q ss_pred eeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCc-ccccCCCCC
Q 045071 181 KTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSL-WGTTSSLPR 259 (453)
Q Consensus 181 ~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~-W~~~~~~p~ 259 (453)
..+.+||..++.|..+..+... .....++...+++-.++..+.+ ..+.+|+..+ +. |.....+..
T Consensus 33 ~~i~iw~~~~~~~~~~~~~~~h-~~~v~~~~~s~~~~~l~s~s~d---------~~v~vwd~~~----~~~~~~~~~~~~ 98 (377)
T 3dwl_C 33 NQVELYEQDGNGWKHARTFSDH-DKIVTCVDWAPKSNRIVTCSQD---------RNAYVYEKRP----DGTWKQTLVLLR 98 (377)
T ss_dssp SCBCEEEEETTEEEECCCBCCC-SSCEEEEEECTTTCCEEEEETT---------SSEEEC----------CCCCEEECCC
T ss_pred CEEEEEEccCCceEEEEEEecC-CceEEEEEEeCCCCEEEEEeCC---------CeEEEEEcCC----CCceeeeeEecc
Confidence 3577888888766555544321 1223345555544334443332 2457777776 44 443322211
Q ss_pred cccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCc-E---EEeecCCccccCCCceee--eCCeEEEEEEEeccCCCC
Q 045071 260 LCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANA-W---FNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNV 331 (453)
Q Consensus 260 ~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~-W---~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~ 331 (453)
... .-..+.+ +|.+.+.+.....|..||+.+++ | ..+..+ +.....-++ -+|++++.+...
T Consensus 99 ~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~~~~~d------ 167 (377)
T 3dwl_C 99 LNR--AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRP---LRSTILSLDWHPNNVLLAAGCAD------ 167 (377)
T ss_dssp CSS--CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSS---CCSCEEEEEECTTSSEEEEEESS------
T ss_pred cCC--ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecc---cCCCeEEEEEcCCCCEEEEEeCC------
Confidence 000 0001111 34433333333578888888764 3 222211 111111122 256766655422
Q ss_pred CCcEEEEEee
Q 045071 332 PKSLRLWSLQ 341 (453)
Q Consensus 332 ~~~i~vw~ld 341 (453)
..+.+|.++
T Consensus 168 -~~i~iwd~~ 176 (377)
T 3dwl_C 168 -RKAYVLSAY 176 (377)
T ss_dssp -SCEEEEEEC
T ss_pred -CEEEEEEEE
Confidence 257999885
No 104
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=75.80 E-value=52 Score=30.69 Aligned_cols=109 Identities=6% Similarity=0.026 Sum_probs=50.2
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
+.+|-+++.+... ..+.++|..+++....-.. ......++...++.-.++..+.+ ..+.+||..++
T Consensus 106 ~~~~~~l~~~~~d--g~i~iwd~~~~~~~~~~~~---h~~~v~~~~~~~~~~~l~s~s~d---------~~i~iwd~~~~ 171 (420)
T 3vl1_A 106 KLQMRRFILGTTE--GDIKVLDSNFNLQREIDQA---HVSEITKLKFFPSGEALISSSQD---------MQLKIWSVKDG 171 (420)
T ss_dssp CSSSCEEEEEETT--SCEEEECTTSCEEEEETTS---SSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTTC
T ss_pred ecCCCEEEEEECC--CCEEEEeCCCcceeeeccc---ccCccEEEEECCCCCEEEEEeCC---------CeEEEEeCCCC
Confidence 3345444444332 3688999887765443211 11223355555544344443332 24577887662
Q ss_pred CCCCcccccCCCCCcccCCCCCeEEE-CCEEEEEecCCCEEEEEECCCCcE
Q 045071 246 GFFSLWGTTSSLPRLCSLESGRMVQV-NGKFYCMNYSPFSVLAYDISANAW 295 (453)
Q Consensus 246 ~~~~~W~~~~~~p~~~~~~~~~~v~~-~G~lY~~~~~~~~i~~yD~~~~~W 295 (453)
. .-..+..... .. ....+. +|...+.+.....|..||+.+.+-
T Consensus 172 ~---~~~~~~~h~~--~v--~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 172 S---NPRTLIGHRA--TV--TDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp C---CCEEEECCSS--CE--EEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred c---CceEEcCCCC--cE--EEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 1 1111110000 00 111222 344333444446789999987654
No 105
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=75.62 E-value=25 Score=33.95 Aligned_cols=106 Identities=9% Similarity=0.114 Sum_probs=61.3
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCc-ee-eeCCe-EEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPS-LL-DSNGK-LILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~-lv-~~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
+|.||+.... ..|..||++++..+.+... ...+. ++ ..+|+ ||+...... . ....++.++.. ..|.
T Consensus 149 ~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~----~~~P~~ia~d~~G~~lyvad~~~~-~----~~~~v~~~~~~-g~~~ 217 (430)
T 3tc9_A 149 HNHLYLVGEQ-HPTRLIDFEKEYVSTVYSG----LSKVRTICWTHEADSMIITNDQNN-N----DRPNNYILTRE-SGFK 217 (430)
T ss_dssp EEEEEEEEBT-EEEEEEETTTTEEEEEECC----CSCEEEEEECTTSSEEEEEECCSC-T----TSEEEEEEEGG-GTSC
T ss_pred CCeEEEEeCC-CcEEEEECCCCEEEEEecC----CCCcceEEEeCCCCEEEEEeCCCC-c----ccceEEEEeCC-Ccee
Confidence 3889998876 7899999999888766321 12222 32 23566 777553221 1 11244444542 3343
Q ss_pred ---EEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 349 ---EIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 349 ---~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.+..+.. ...+.+...++.||+......++..||+++...
T Consensus 218 ~~~~l~~~~~-----------p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 218 VITELTKGQN-----------CNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp SEEEEEECSS-----------CCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred eeeeeccCCC-----------ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 2222211 123333233678999877778999999987765
No 106
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=75.58 E-value=55 Score=30.87 Aligned_cols=159 Identities=9% Similarity=0.100 Sum_probs=74.4
Q ss_pred CCCCCCCe--eee-ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCccc
Q 045071 155 ALVPSEFS--PAS-SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYA 231 (453)
Q Consensus 155 ~~lp~~~~--~~~-s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~ 231 (453)
|.+..+++ +++ |.+++|-+..+ +.++|||..|++...+-..... .....++...+++-.+ +.|...
T Consensus 100 p~~~~d~y~~~l~wS~~n~lAvgld----~tV~lWd~~tg~~~~~~~~~~~-~~~V~sv~fspdg~~l-asgs~D----- 168 (420)
T 4gga_A 100 PEIRNDYYLNLVDWSSGNVLAVALD----NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYL-AVGTSS----- 168 (420)
T ss_dssp TTCCCCTTCBCEEECTTSEEEEEET----TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEE-EEEETT-----
T ss_pred CCCcccccceeEEECCCCEEEEEeC----CEEEEEECCCCCEEEEEEecCC-CCcEEEEEECCCCCEE-EEEECC-----
Confidence 33444442 444 45666655432 3799999999986654333221 1123345555544333 344321
Q ss_pred ccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCc-
Q 045071 232 VKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPS- 310 (453)
Q Consensus 232 ~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~- 310 (453)
..+.+|+..+ +.-. ..+..... ....+..++.+...+.....+..+|............ .+.....
T Consensus 169 ---g~v~iWd~~~----~~~~--~~~~~h~~--~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~--~h~~~~~~ 235 (420)
T 4gga_A 169 ---AEVQLWDVQQ----QKRL--RNMTSHSA--RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS--GHSQEVCG 235 (420)
T ss_dssp ---SCEEEEETTT----TEEE--EEECCCSS--CEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE--CCSSCEEE
T ss_pred ---CeEEEEEcCC----CcEE--EEEeCCCC--ceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEec--ccccceee
Confidence 2457888776 3211 11110000 0112334555444444446788888876543322111 1111111
Q ss_pred e-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCC
Q 045071 311 L-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACG 344 (453)
Q Consensus 311 l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~ 344 (453)
+ ..-+|+.++.+. .+ ..+.||......
T Consensus 236 ~~~~~~g~~l~s~~-~D------~~v~i~~~~~~~ 263 (420)
T 4gga_A 236 LRWAPDGRHLASGG-ND------NLVNVWPSAPGE 263 (420)
T ss_dssp EEECTTSSEEEEEE-TT------SCEEEEESSCCS
T ss_pred eeecCCCCeeeeee-cc------ccceEEeecccc
Confidence 1 123566655543 22 256888876543
No 107
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=74.88 E-value=18 Score=37.57 Aligned_cols=50 Identities=20% Similarity=0.285 Sum_probs=31.6
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceeeeCCeEEEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLDSNGKLILVA 322 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~~~g~L~vv~ 322 (453)
++.|||.......|.+||+....-+.+.. .......+ .|...+++||++.
T Consensus 551 ~~~LY~aD~~~~~I~~~d~dG~~~~~~~~-~~~~~~~P~glavd~~~lywtd 601 (699)
T 1n7d_A 551 SGRLYWVDSKLHSISSIDVNGGNRKTILE-DEKRLAHPFSLAVFEDKVFWTD 601 (699)
T ss_dssp TCCEEEEETTTTEEEEECSSSSCCEEECC-CSSSCSSCCCCEEETTEEEEEC
T ss_pred CCEEEEEecCCCeEEEEccCCCceEEEEe-cCCcCCCceEeEEECCEEEEEe
Confidence 48899998877899999998654444321 11111222 4555677888766
No 108
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=74.73 E-value=51 Score=30.15 Aligned_cols=179 Identities=15% Similarity=0.183 Sum_probs=86.0
Q ss_pred eEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcc
Q 045071 182 TLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLC 261 (453)
Q Consensus 182 ~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~ 261 (453)
.++.-.---++|..+.........+..++..++ -++++++... .+|.+..+. .+|+.+.......
T Consensus 57 ~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~--~~~~~~g~~g-----------~i~~S~DgG--~tW~~~~~~~~~~ 121 (327)
T 2xbg_A 57 TLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG--NEGWIVGEPP-----------IMLHTTDGG--QSWSQIPLDPKLP 121 (327)
T ss_dssp EEEEESSTTSSCEECCCCCSCCCCEEEEEEEET--TEEEEEEETT-----------EEEEESSTT--SSCEECCCCTTCS
T ss_pred eEEEeCCCCCCCeECCCCCCCCCccEEEEEecC--CeEEEEECCC-----------eEEEECCCC--CCceECccccCCC
Confidence 344444444578877532211111222344443 2455555321 566665544 7999875321100
Q ss_pred -cCCCCCeE-EECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCcee-eeCCeEEEEEEEeccCCCCCCcEEEE
Q 045071 262 -SLESGRMV-QVNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLL-DSNGKLILVAAVEKSKLNVPKSLRLW 338 (453)
Q Consensus 262 -~~~~~~~v-~~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw 338 (453)
.. ...+ .-++.+|..+.. ..|+.-+=....|+.+..+.+.... .++ .-++++++++. .. .+|
T Consensus 122 ~~~--~~i~~~~~~~~~~~~~~-g~v~~S~DgG~tW~~~~~~~~~~~~--~~~~~~~~~~~~~g~--~G--------~~~ 186 (327)
T 2xbg_A 122 GSP--RLIKALGNGSAEMITNV-GAIYRTKDSGKNWQALVQEAIGVMR--NLNRSPSGEYVAVSS--RG--------SFY 186 (327)
T ss_dssp SCE--EEEEEEETTEEEEEETT-CCEEEESSTTSSEEEEECSCCCCEE--EEEECTTSCEEEEET--TS--------SEE
T ss_pred CCe--EEEEEECCCCEEEEeCC-ccEEEEcCCCCCCEEeecCCCcceE--EEEEcCCCcEEEEEC--CC--------cEE
Confidence 11 1122 235778876653 3454443345689988665432211 222 23577776552 11 456
Q ss_pred EeecC-CCCeEEEeecCHHHHHHhhcccCCCcEEE--EeeCCEEEEEEcCCCeEEEEECC-CCceEEcC
Q 045071 339 SLQAC-GTLWAEIERMPQQLYAQFAEIEAGNGFDT--IGHGEFIVIVIRGSDKALLFDLC-MKSWQWIP 403 (453)
Q Consensus 339 ~ld~~-~~~W~~v~~mp~~~~~~~~~~~~~~~~~~--~~~g~~I~l~~~~~~~v~~Yd~~-~~~W~~l~ 403 (453)
+-... ...|+++..... ..+.. +..++.+|+... .+.+...+.. -++|+.+.
T Consensus 187 ~S~d~gG~tW~~~~~~~~------------~~~~~~~~~~~g~~~~~~~-~G~~~~s~~D~G~tW~~~~ 242 (327)
T 2xbg_A 187 STWEPGQTAWEPHNRTTS------------RRLHNMGFTPDGRLWMIVN-GGKIAFSDPDNSENWGELL 242 (327)
T ss_dssp EEECTTCSSCEEEECCSS------------SCEEEEEECTTSCEEEEET-TTEEEEEETTEEEEECCCB
T ss_pred EEeCCCCCceeECCCCCC------------CccceeEECCCCCEEEEeC-CceEEEecCCCCCeeEecc
Confidence 65544 678998754221 11111 122445665543 3445555432 46787664
No 109
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=74.63 E-value=46 Score=29.72 Aligned_cols=67 Identities=7% Similarity=0.089 Sum_probs=42.9
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCcee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
++.+||.......|..||+.+++...+..+.. . ..++ .-+|+|++ +. .. .|+.++..+++++.+
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~--~--~~i~~~~dG~l~v-~~--~~--------~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAP--V--SSVALRQSGGYVA-TI--GT--------KFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECSSC--E--EEEEEBTTSSEEE-EE--TT--------EEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEeCCCc--e--EEEEECCCCCEEE-EE--CC--------eEEEEECCCCcEEEE
Confidence 47899998777899999999887765543311 1 1232 34678665 32 21 677777766777766
Q ss_pred eec
Q 045071 351 ERM 353 (453)
Q Consensus 351 ~~m 353 (453)
...
T Consensus 89 ~~~ 91 (297)
T 3g4e_A 89 ATV 91 (297)
T ss_dssp EEC
T ss_pred Eec
Confidence 554
No 110
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=74.60 E-value=50 Score=29.99 Aligned_cols=63 Identities=17% Similarity=0.213 Sum_probs=34.0
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee--C--CeEEEEEEEeccCCCCCCcEEEEEeecC
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS--N--GKLILVAAVEKSKLNVPKSLRLWSLQAC 343 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~--~--g~L~vv~~~~~~~~~~~~~i~vw~ld~~ 343 (453)
+.+.+.+.....|..||+.+++|..+.... ........+.. + +++++++... ..+.+|.++..
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~~~~ 135 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHA-VHSASVNSVQWAPHEYGPLLLVASSD-------GKVSVVEFKEN 135 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEECCTT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeec-CCCcceEEEEeCCCCCCCEEEEecCC-------CcEEEEecCCC
Confidence 343333433467999999999876553221 11111222222 3 6676666422 36788987753
No 111
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=74.50 E-value=12 Score=34.09 Aligned_cols=26 Identities=8% Similarity=0.290 Sum_probs=20.1
Q ss_pred ECCEEEEEecCCCEEEEEECCCCcEE
Q 045071 271 VNGKFYCMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 271 ~~G~lY~~~~~~~~i~~yD~~~~~W~ 296 (453)
.++.+|+.......|..+|+.+++..
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~ 34 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVY 34 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEE
Confidence 35677877766689999999988654
No 112
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=74.24 E-value=45 Score=29.57 Aligned_cols=116 Identities=14% Similarity=0.154 Sum_probs=60.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCcc-ccCCC-ce-eeeCCeEEEEEE---E-ecc----CCCCCCcEEEEEe
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRR-FLRSP-SL-LDSNGKLILVAA---V-EKS----KLNVPKSLRLWSL 340 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~-~~~~~-~l-v~~~g~L~vv~~---~-~~~----~~~~~~~i~vw~l 340 (453)
+|.+|+.......|..||+.+++...+...... ....+ .+ +.-+|+|++... . ... .......-.||.+
T Consensus 79 dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~ 158 (296)
T 3e5z_A 79 QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRL 158 (296)
T ss_dssp TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEE
T ss_pred CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEE
Confidence 688887766557899999988887765322111 11111 23 335789887531 0 000 0000112378999
Q ss_pred ecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECC-CCce
Q 045071 341 QACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLC-MKSW 399 (453)
Q Consensus 341 d~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~-~~~W 399 (453)
+.. ++...+..-.. ....+.....|+.+ +.......+.+||+. +++.
T Consensus 159 ~~~-g~~~~~~~~~~----------~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 159 APD-GTLSAPIRDRV----------KPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp CTT-SCEEEEECCCS----------SEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCE
T ss_pred CCC-CCEEEeecCCC----------CCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcC
Confidence 875 44443321100 00122222235555 655556789999986 4444
No 113
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=74.22 E-value=54 Score=30.19 Aligned_cols=180 Identities=10% Similarity=0.057 Sum_probs=81.1
Q ss_pred eEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcc
Q 045071 182 TLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLC 261 (453)
Q Consensus 182 ~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~ 261 (453)
.+.+||..+++....-.... ......++...+..-++++.+... ....+||... .............
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d--------~~i~iwd~~~----~~~~~~~~~~~~~ 163 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMG-PGDAITGMKFNQFNTNQLFVSSIR--------GATTLRDFSG----SVIQVFAKTDSWD 163 (383)
T ss_dssp CEEEEETTSTTCEEEECCCS-TTCBEEEEEEETTEEEEEEEEETT--------TEEEEEETTS----CEEEEEECCCCSS
T ss_pred eEEEEeCCCcccceeeecCC-cCCceeEEEeCCCCCCEEEEEeCC--------CEEEEEECCC----CceEEEeccCCCC
Confidence 56778877666543322111 112233455555333444444321 2346777765 4444332211000
Q ss_pred cCCCCCeEE-ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCe-EEEEEEEeccCCCCCCcEEE
Q 045071 262 SLESGRMVQ-VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGK-LILVAAVEKSKLNVPKSLRL 337 (453)
Q Consensus 262 ~~~~~~~v~-~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~-L~vv~~~~~~~~~~~~~i~v 337 (453)
. .-....+ -+|.+.+.+.....|..||+.......+... .....-+. -+++ +++.+.. + ..++|
T Consensus 164 ~-~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h----~~~v~~~~~~~~~~~~l~s~~~-d------~~i~i 231 (383)
T 3ei3_B 164 Y-WYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLH----KAKVTHAEFNPRCDWLMATSSV-D------ATVKL 231 (383)
T ss_dssp C-CEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECS----SSCEEEEEECSSCTTEEEEEET-T------SEEEE
T ss_pred C-CeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccC----CCcEEEEEECCCCCCEEEEEeC-C------CEEEE
Confidence 0 0001111 2344444444447899999965544444221 11111222 2455 6655542 2 36799
Q ss_pred EEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEE---e-eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 338 WSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTI---G-HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 338 w~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~---~-~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
|.+......-..+..+.. ...+.++ . .++.|+. ....+.+.+||+.+.+
T Consensus 232 wd~~~~~~~~~~~~~~~~-----------~~~v~~~~~s~~~~~~l~~-~~~d~~i~iwd~~~~~ 284 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEMPH-----------EKPVNAAYFNPTDSTKLLT-TDQRNEIRVYSSYDWS 284 (383)
T ss_dssp EEGGGCCSTTCEEEEEEC-----------SSCEEEEEECTTTSCEEEE-EESSSEEEEEETTBTT
T ss_pred EeCCCCCcccceEEEecC-----------CCceEEEEEcCCCCCEEEE-EcCCCcEEEEECCCCc
Confidence 988753322222222211 0122222 2 3444443 3446889999998753
No 114
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=73.88 E-value=14 Score=33.69 Aligned_cols=110 Identities=10% Similarity=0.088 Sum_probs=58.7
Q ss_pred CCEEEEEecCC----CEEEEEECCCCcEEEeecCCccccCCC-cee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 272 NGKFYCMNYSP----FSVLAYDISANAWFNIQAPMRRFLRSP-SLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 272 ~G~lY~~~~~~----~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
+|.+|+..... ..|..||++++....+...... ...+ .++ .-+|++++....... ......||.++....
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~~~---~~~~~~l~~~~~~~~ 172 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLST-AYCIDDMVFDSKGGFYFTDFRGYS---TNPLGGVYYVSPDFR 172 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSS-CCCEEEEEECTTSCEEEEECCCBT---TBCCEEEEEECTTSC
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCcc-CCcccceEECCCCCEEEEeccccc---cCCCceEEEEeCCCC
Confidence 57777765543 4899999998876533221111 1111 222 346888875431110 012348999987655
Q ss_pred CeEEEee-cCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCC
Q 045071 346 LWAEIER-MPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 346 ~W~~v~~-mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
+...+.. +. ....+.....|+.+|+.....+.+.+||+.+
T Consensus 173 ~~~~~~~~~~-----------~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 173 TVTPIIQNIS-----------VANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CEEEEEEEES-----------SEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred EEEEeecCCC-----------cccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 5554321 10 0011222224557888765457889999854
No 115
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=73.87 E-value=15 Score=38.10 Aligned_cols=116 Identities=17% Similarity=0.142 Sum_probs=64.0
Q ss_pred CeEEECCEEEEEecCCCEEEEEECCCC--cEEEeecCCccc--------cCCCceeeeCCeEEEEEEEeccCCCCCCcEE
Q 045071 267 RMVQVNGKFYCMNYSPFSVLAYDISAN--AWFNIQAPMRRF--------LRSPSLLDSNGKLILVAAVEKSKLNVPKSLR 336 (453)
Q Consensus 267 ~~v~~~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~~~~--------~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~ 336 (453)
..++.+|++|+.+.. ..|.++|.+++ .|+.- ...+.. .....++..+++||+.. .+. .
T Consensus 65 ~P~v~~g~vyv~~~~-~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~--~dg--------~ 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGPF-SVVYALDARDGRLIWKYD-PQSDRHRAGEACCDAVNRGVAVWKGKVYVGV--LDG--------R 132 (689)
T ss_dssp CCEEETTEEEEECGG-GCEEEEETTTCCEEEEEC-CCCCGGGGGGCTTCSCCCCCEEETTEEEEEC--TTS--------E
T ss_pred cCEEECCEEEEEcCC-CeEEEEECCCCceeEEEc-CCCCccccccccccCCCCccEEECCEEEEEc--cCC--------E
Confidence 457899999998765 57999999875 58652 221110 01122345678887633 111 5
Q ss_pred EEEeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCc--eEE
Q 045071 337 LWSLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKS--WQW 401 (453)
Q Consensus 337 vw~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~--W~~ 401 (453)
|+.+|.. ...|+.-....... ... .....+..++.||+.... .+.+.+||.++.+ |+.
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~---~~~----~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 199 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKR---SYT----ITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRF 199 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTS---CCB----CCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCC---Ccc----ccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEe
Confidence 6667754 33576432101100 000 000112247888875322 3689999999876 654
No 116
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=73.64 E-value=51 Score=29.66 Aligned_cols=23 Identities=0% Similarity=-0.136 Sum_probs=15.0
Q ss_pred eCCEEEEEEcCCCeEEEEECCCC
Q 045071 375 HGEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 375 ~g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
.+..+++.....+.+.+||+.+.
T Consensus 332 ~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 332 DKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp SSTTEEEEEETTSEEEEEEECC-
T ss_pred CCCeEEEEecCCCcEEEEECCCc
Confidence 35556545555788999998753
No 117
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=73.41 E-value=33 Score=30.97 Aligned_cols=113 Identities=8% Similarity=0.030 Sum_probs=58.8
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ceee-eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLLD-SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+|.+|+.......|..||+++++...+..... ..+ .++. -+|+|++....... ..-.|+.++..+.....
T Consensus 55 ~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~i~~~~dg~l~v~~~~~~~-----~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 55 QGQLFLLDVFEGNIFKINPETKEIKRPFVSHK---ANPAAIKIHKDGRLFVCYLGDFK-----STGGIFAATENGDNLQD 126 (333)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEECSS---SSEEEEEECTTSCEEEEECTTSS-----SCCEEEEECTTSCSCEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCC---CCcceEEECCCCcEEEEeCCCCC-----CCceEEEEeCCCCEEEE
Confidence 57888877655789999999988876532211 112 2332 46888875421100 01256777765554442
Q ss_pred Eee-cCHHHHHHhhcccCCCcEE-EEeeCCEEEEEEcC------CCeEEEEECCCCceEEc
Q 045071 350 IER-MPQQLYAQFAEIEAGNGFD-TIGHGEFIVIVIRG------SDKALLFDLCMKSWQWI 402 (453)
Q Consensus 350 v~~-mp~~~~~~~~~~~~~~~~~-~~~~g~~I~l~~~~------~~~v~~Yd~~~~~W~~l 402 (453)
+.. ... ...... ++..++.+|+.... ...++.||.++++.+.+
T Consensus 127 ~~~~~~~----------~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 127 IIEDLST----------AYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp EECSSSS----------CCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EEccCcc----------CCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 211 111 001111 12224456665432 25678888776655443
No 118
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=73.03 E-value=35 Score=30.94 Aligned_cols=122 Identities=16% Similarity=0.093 Sum_probs=63.5
Q ss_pred eeEEEEcCcccceecCCC-CCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCC
Q 045071 181 KTLILCNPVTGSLSQLPP-TLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPR 259 (453)
Q Consensus 181 ~~~~v~NP~T~~w~~LP~-~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~ 259 (453)
..++++||.+++...+.. +.. ..++.++++...++++... .....+|+...... ...+....++.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~-----p~gia~~~dg~~lyv~d~~--------~~~I~~~~~~~~~~-~~~~~~~~~~g 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHV-----PGGAEVSADSSFVLVAEFL--------SHQIVKYWLEGPKK-GTAEVLVKIPN 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESC-----CCEEEECTTSSEEEEEEGG--------GTEEEEEESSSTTT-TCEEEEEECSS
T ss_pred ceEEEEeCCCCEEEEeccCCcc-----CcceEECCCCCEEEEEeCC--------CCeEEEEECCCCcC-CccceEEeCCC
Confidence 568899998876544321 111 1255666555456665431 13446777654110 12222222221
Q ss_pred cccCCCCCeEEE--CCEEEEEecC----------CCEEEEEECCCCcEEEeecCCccccCCC-ceeeeCCeEEEEE
Q 045071 260 LCSLESGRMVQV--NGKFYCMNYS----------PFSVLAYDISANAWFNIQAPMRRFLRSP-SLLDSNGKLILVA 322 (453)
Q Consensus 260 ~~~~~~~~~v~~--~G~lY~~~~~----------~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~~~g~L~vv~ 322 (453)
...+.+ +|.+|+.... ...|..||+.......+..|.......+ .++..+|+||+.+
T Consensus 231 ------P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 231 ------PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp ------EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEEC
T ss_pred ------CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEee
Confidence 122333 4788876543 2569999998766666655432111222 3445689999754
No 119
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=72.79 E-value=32 Score=32.76 Aligned_cols=23 Identities=4% Similarity=0.115 Sum_probs=14.8
Q ss_pred CCEEEEEecCCCEEEEEECCCCc
Q 045071 272 NGKFYCMNYSPFSVLAYDISANA 294 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~ 294 (453)
+|.+.+.+.....|..+|.....
T Consensus 220 ~~~~l~~g~~dg~i~~wd~~~~~ 242 (435)
T 4e54_B 220 SSRMVVTGDNVGNVILLNMDGKE 242 (435)
T ss_dssp TTTEEEEECSSSBEEEEESSSCB
T ss_pred CCCEEEEEeCCCcEeeeccCcce
Confidence 45555555544678899987654
No 120
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=72.00 E-value=54 Score=29.23 Aligned_cols=190 Identities=14% Similarity=0.098 Sum_probs=85.7
Q ss_pred eeeeCCCCCeEeccCCCCCCCCeeeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCC-CCcceEEEEEcCCceE
Q 045071 140 YLFDPHELSWYRISFALVPSEFSPASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRP-RLFPSIGLKVTPTAVD 218 (453)
Q Consensus 140 ~~fdp~~~~w~~l~l~~lp~~~~~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~-r~~~~~~~~~~~~~yk 218 (453)
..||+..++...+..+..+ ..+.-..+|-+++... ..++++|+.+++...+...... .....-.+.+++.+ +
T Consensus 38 ~~~d~~~~~~~~~~~~~~~--~~i~~~~dG~l~v~~~----~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG-~ 110 (297)
T 3g4e_A 38 CRWDSFTKQVQRVTMDAPV--SSVALRQSGGYVATIG----TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG-R 110 (297)
T ss_dssp EEEETTTCCEEEEECSSCE--EEEEEBTTSSEEEEET----TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS-C
T ss_pred EEEECCCCcEEEEeCCCce--EEEEECCCCCEEEEEC----CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC-C
Confidence 4677776655444333211 1222234454554432 3789999999887665433211 11112245556543 3
Q ss_pred EEEEccCCC-CcccccccceeEEEcccCCCCCcccccC-CCCCcccCCCCCeEEE--CC-EEEEEecCCCEEEEEEC--C
Q 045071 219 VTVAGDDLI-SPYAVKNLSSESFHIDAGGFFSLWGTTS-SLPRLCSLESGRMVQV--NG-KFYCMNYSPFSVLAYDI--S 291 (453)
Q Consensus 219 vv~~g~~~~-~~~~~~~~~~evyds~~~~~~~~W~~~~-~~p~~~~~~~~~~v~~--~G-~lY~~~~~~~~i~~yD~--~ 291 (453)
+++...... ...........+|..+.. +.-..+. .+. . ...+.+ +| .+|+.......|.+||. .
T Consensus 111 l~~~~~~~~~~~~~~~~~~~~l~~~d~~---g~~~~~~~~~~----~--pngi~~spdg~~lyv~~~~~~~i~~~~~d~~ 181 (297)
T 3g4e_A 111 YFAGTMAEETAPAVLERHQGALYSLFPD---HHVKKYFDQVD----I--SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQ 181 (297)
T ss_dssp EEEEEEECCSBTTBCCTTCEEEEEECTT---SCEEEEEEEES----B--EEEEEECTTSCEEEEEEGGGTEEEEEEECTT
T ss_pred EEEecCCcccccccccCCCcEEEEEECC---CCEEEEeeccc----c--ccceEEcCCCCEEEEecCCCCcEEEEeccCC
Confidence 444321100 000000112345544431 1222111 110 0 112222 45 58988776678999986 4
Q ss_pred CCcEEE--eecCCccccCCC-ce-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecC
Q 045071 292 ANAWFN--IQAPMRRFLRSP-SL-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMP 354 (453)
Q Consensus 292 ~~~W~~--i~~p~~~~~~~~-~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp 354 (453)
++.... +-...+.....+ .+ +.-+|+|++... ... .|+++++.+++....-.+|
T Consensus 182 ~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~-~~~--------~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 182 TGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACY-NGG--------RVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp TCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEE-TTT--------EEEEECTTTCCEEEEEECS
T ss_pred CCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEc-CCC--------EEEEEcCCCceEEEEEECC
Confidence 554421 101111111111 23 335789887553 221 6778888656665544555
No 121
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=71.97 E-value=47 Score=30.56 Aligned_cols=22 Identities=14% Similarity=0.247 Sum_probs=15.1
Q ss_pred CCEEEEEEcCCCeEEEEECCCCc
Q 045071 376 GEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 376 g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
++.++.. ...+.+.+||+.+.+
T Consensus 257 ~~~l~~~-~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 257 GLHLLTV-GTDNRMRLWNSSNGE 278 (408)
T ss_dssp SSEEEEE-ETTSCEEEEETTTCC
T ss_pred CCEEEEe-cCCCeEEEEECCCCc
Confidence 4455543 446789999998765
No 122
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=71.72 E-value=56 Score=33.87 Aligned_cols=22 Identities=9% Similarity=0.154 Sum_probs=13.5
Q ss_pred CCEEEEEecCCCEEEEEECCCC
Q 045071 272 NGKFYCMNYSPFSVLAYDISAN 293 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~ 293 (453)
+|...+.+.....|..||..++
T Consensus 108 ~~~~l~~~~~dg~i~vw~~~~~ 129 (814)
T 3mkq_A 108 TKPYVLSGSDDLTVKLWNWENN 129 (814)
T ss_dssp SSSEEEEEETTSEEEEEEGGGT
T ss_pred CCCEEEEEcCCCEEEEEECCCC
Confidence 3443333444468999999876
No 123
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.39 E-value=55 Score=28.98 Aligned_cols=101 Identities=11% Similarity=0.133 Sum_probs=55.4
Q ss_pred CCEEEEEecCCCEEEEEECC-CCcE-E--EeecCCccccCCC-ce-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 272 NGKFYCMNYSPFSVLAYDIS-ANAW-F--NIQAPMRRFLRSP-SL-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~-~~~W-~--~i~~p~~~~~~~~-~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
+|.+++.......|..||+. +++. . .+- ... ...+ .+ +.-+|+|++.. .. .|+.+++. +
T Consensus 182 dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~--~~~p~~i~~d~~G~l~v~~---~~--------~v~~~~~~-g 246 (296)
T 3e5z_A 182 SGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVE--PGKTDGLRVDAGGLIWASA---GD--------GVHVLTPD-G 246 (296)
T ss_dssp TSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCS--SSCCCSEEEBTTSCEEEEE---TT--------EEEEECTT-S
T ss_pred CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCC--CCCCCeEEECCCCCEEEEc---CC--------eEEEECCC-C
Confidence 57666555555789999987 5555 2 221 111 1111 23 33578988755 21 56666764 3
Q ss_pred CeEEEeecCHHHHHHhhcccCCCcEEEEe--eCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 346 LWAEIERMPQQLYAQFAEIEAGNGFDTIG--HGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 346 ~W~~v~~mp~~~~~~~~~~~~~~~~~~~~--~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
+....-.++.. ...+ +++ .++.||+... ..++.|++++++.+
T Consensus 247 ~~~~~~~~~~~----------~~~~-~f~~~d~~~L~v~t~--~~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 247 DELGRVLTPQT----------TSNL-CFGGPEGRTLYMTVS--TEFWSIETNVRGLE 290 (296)
T ss_dssp CEEEEEECSSC----------CCEE-EEESTTSCEEEEEET--TEEEEEECSCCBCC
T ss_pred CEEEEEECCCC----------ceeE-EEECCCCCEEEEEcC--CeEEEEEccccccc
Confidence 33332233321 0111 232 3457888754 68999999988764
No 124
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=71.23 E-value=62 Score=29.84 Aligned_cols=22 Identities=14% Similarity=0.010 Sum_probs=13.6
Q ss_pred CCEEEEEEcCCCeEEEEECCCC
Q 045071 376 GEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 376 g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
++.+++.....+.|.+||+.+.
T Consensus 323 d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 323 DHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp STTEEEEEETTSCEEEEECC--
T ss_pred CCCEEEEEcCCCeEEEEECCCC
Confidence 3444555555788999998653
No 125
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=71.13 E-value=50 Score=29.43 Aligned_cols=142 Identities=11% Similarity=0.115 Sum_probs=66.7
Q ss_pred ceeEEEcccCCCCCcccccCCCCCcccCCCCC-eEEECCEEEEEecCCCEEEEEECCCC-cEEEeecCCccccCCCceee
Q 045071 236 SSESFHIDAGGFFSLWGTTSSLPRLCSLESGR-MVQVNGKFYCMNYSPFSVLAYDISAN-AWFNIQAPMRRFLRSPSLLD 313 (453)
Q Consensus 236 ~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~-~v~~~G~lY~~~~~~~~i~~yD~~~~-~W~~i~~p~~~~~~~~~lv~ 313 (453)
.+.++|.++|. -.|+.-..-.. .... .+.-+|.+++ ... ..+.+||++.+ .|+ +..+....... ....
T Consensus 16 ~v~~~d~~tG~--~~w~~~~~~~~----~~~~~~~~pdG~ilv-s~~-~~V~~~d~~G~~~W~-~~~~~~~~~~~-~~~~ 85 (276)
T 3no2_A 16 KIAIINKDTKE--IVWEYPLEKGW----ECNSVAATKAGEILF-SYS-KGAKMITRDGRELWN-IAAPAGCEMQT-ARIL 85 (276)
T ss_dssp EEEEEETTTTE--EEEEEECCTTC----CCCEEEECTTSCEEE-ECB-SEEEEECTTSCEEEE-EECCTTCEEEE-EEEC
T ss_pred EEEEEECCCCe--EEEEeCCCccC----CCcCeEECCCCCEEE-eCC-CCEEEECCCCCEEEE-EcCCCCccccc-cEEC
Confidence 44677776654 56775432100 0011 2234788777 333 68999999433 354 33331111111 1123
Q ss_pred eCCeEEEEEEEeccCCCCCCcEEEEEeecCCC-CeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEE
Q 045071 314 SNGKLILVAAVEKSKLNVPKSLRLWSLQACGT-LWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLF 392 (453)
Q Consensus 314 ~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~-~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Y 392 (453)
-+|+++++... . .-+|++++.+.. .|+. .+......... ..........|+.+ +.....+++.+|
T Consensus 86 ~dG~~lv~~~~-~-------~~~v~~vd~~Gk~l~~~--~~~~~~~~~~~---~~~~v~~~~~G~~l-v~~~~~~~v~~~ 151 (276)
T 3no2_A 86 PDGNALVAWCG-H-------PSTILEVNMKGEVLSKT--EFETGIERPHA---QFRQINKNKKGNYL-VPLFATSEVREI 151 (276)
T ss_dssp TTSCEEEEEES-T-------TEEEEEECTTSCEEEEE--EECCSCSSGGG---SCSCCEECTTSCEE-EEETTTTEEEEE
T ss_pred CCCCEEEEecC-C-------CCEEEEEeCCCCEEEEE--eccCCCCcccc---cccCceECCCCCEE-EEecCCCEEEEE
Confidence 47888765532 0 126788876422 3432 11110000000 11122333345544 445556889999
Q ss_pred ECCCC-ceEE
Q 045071 393 DLCMK-SWQW 401 (453)
Q Consensus 393 d~~~~-~W~~ 401 (453)
|.+-+ .|+.
T Consensus 152 d~~G~~~w~~ 161 (276)
T 3no2_A 152 APNGQLLNSV 161 (276)
T ss_dssp CTTSCEEEEE
T ss_pred CCCCCEEEEE
Confidence 99833 2544
No 126
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=70.36 E-value=61 Score=29.11 Aligned_cols=190 Identities=9% Similarity=-0.002 Sum_probs=89.3
Q ss_pred cCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCC
Q 045071 167 SGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGG 246 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~ 246 (453)
.+|-|++.... ...++++||.++.-..+.... ...++.++++. +++++..... ......|+..+
T Consensus 41 ~~g~lyv~d~~--~~~I~~~d~~g~~~~~~~~~~-----~p~gia~~~dG-~l~vad~~~~------~~~v~~~d~~~-- 104 (306)
T 2p4o_A 41 PDGTIFVTNHE--VGEIVSITPDGNQQIHATVEG-----KVSGLAFTSNG-DLVATGWNAD------SIPVVSLVKSD-- 104 (306)
T ss_dssp TTSCEEEEETT--TTEEEEECTTCCEEEEEECSS-----EEEEEEECTTS-CEEEEEECTT------SCEEEEEECTT--
T ss_pred CCCCEEEEeCC--CCeEEEECCCCceEEEEeCCC-----CceeEEEcCCC-cEEEEeccCC------cceEEEEcCCC--
Confidence 46667766532 247888998765332222111 22356666543 3666543110 01234566555
Q ss_pred CCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCCcEEEe-ecC-----Cc-cccCCC-ceeeeCCeE
Q 045071 247 FFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANAWFNI-QAP-----MR-RFLRSP-SLLDSNGKL 318 (453)
Q Consensus 247 ~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~~W~~i-~~p-----~~-~~~~~~-~lv~~~g~L 318 (453)
+..+.+...+.. .+.....+..++.+|+.......|+.+|+.+.+-+.. ..+ .+ .....+ .+...++.|
T Consensus 105 --g~~~~~~~~~~~-~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~l 181 (306)
T 2p4o_A 105 --GTVETLLTLPDA-IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFL 181 (306)
T ss_dssp --SCEEEEEECTTC-SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEE
T ss_pred --CeEEEEEeCCCc-cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEE
Confidence 455444333221 1110111223567888765457899999986532211 001 00 111111 232234567
Q ss_pred EEEEEEeccCCCCCCcEEEEEeecCC-CCe---EEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEEC
Q 045071 319 ILVAAVEKSKLNVPKSLRLWSLQACG-TLW---AEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDL 394 (453)
Q Consensus 319 ~vv~~~~~~~~~~~~~i~vw~ld~~~-~~W---~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~ 394 (453)
|+... .. . +|++++... ... ..+..+. ....+.+-. ++.||+.....++|.+||.
T Consensus 182 yv~d~--~~-----~--~I~~~~~~~~g~~~~~~~~~~~~-----------~P~gi~vd~-dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 182 YVSNT--EK-----M--LLLRIPVDSTDKPGEPEIFVEQT-----------NIDDFAFDV-EGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp EEEET--TT-----T--EEEEEEBCTTSCBCCCEEEEESC-----------CCSSEEEBT-TCCEEEECBTTCCEEEECT
T ss_pred EEEeC--CC-----C--EEEEEEeCCCCCCCccEEEeccC-----------CCCCeEECC-CCCEEEEeCCCCeEEEECC
Confidence 76542 11 2 455555432 222 1122210 112333333 4468888766789999998
Q ss_pred CC
Q 045071 395 CM 396 (453)
Q Consensus 395 ~~ 396 (453)
+.
T Consensus 241 ~G 242 (306)
T 2p4o_A 241 DR 242 (306)
T ss_dssp TC
T ss_pred CC
Confidence 74
No 127
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=69.27 E-value=58 Score=29.78 Aligned_cols=29 Identities=14% Similarity=0.068 Sum_probs=15.7
Q ss_pred CCEEEEEEcCCCeEEEEECCCCceEEcCCC
Q 045071 376 GEFIVIVIRGSDKALLFDLCMKSWQWIPRC 405 (453)
Q Consensus 376 g~~I~l~~~~~~~v~~Yd~~~~~W~~l~~~ 405 (453)
++.+++.. ..+.+++|+.....|+....+
T Consensus 262 ~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~ 290 (377)
T 3dwl_C 262 ESAIVAAG-YNYSPILLQGNESGWAHTRDL 290 (377)
T ss_dssp TTEEEEEE-SSSSEEEECCCC---CCSBCC
T ss_pred CCCEEEEE-cCCcEEEEEeCCCceEEEeee
Confidence 44554444 356677888887777655443
No 128
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=69.17 E-value=80 Score=30.02 Aligned_cols=115 Identities=9% Similarity=0.034 Sum_probs=59.2
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEE-eecCC---c------------------cccCCC-ceee-eCCeEEEEEEEecc
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFN-IQAPM---R------------------RFLRSP-SLLD-SNGKLILVAAVEKS 327 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~---~------------------~~~~~~-~lv~-~~g~L~vv~~~~~~ 327 (453)
+|.+.+.+.....|..||+.+++... +.... + ...... .+.- -+|+.++++...+
T Consensus 251 d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d- 329 (450)
T 2vdu_B 251 KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT- 329 (450)
T ss_dssp STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC-
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC-
Confidence 56555455444789999999876433 22110 0 000000 1111 2466655554222
Q ss_pred CCCCCCcEEEEEe-ecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCC-------C--eEEEEECCCC
Q 045071 328 KLNVPKSLRLWSL-QACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGS-------D--KALLFDLCMK 397 (453)
Q Consensus 328 ~~~~~~~i~vw~l-d~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~-------~--~v~~Yd~~~~ 397 (453)
..+.||.+ +.....+..+..+... .....+....+.+++..... + .++.+|.+++
T Consensus 330 -----~~i~iw~~~~~~~~~l~~~~~~~~~----------~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~ 394 (450)
T 2vdu_B 330 -----KCIIILEMSEKQKGDLALKQIITFP----------YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNEN 394 (450)
T ss_dssp -----SEEEEEEECSSSTTCEEEEEEEECS----------SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTT
T ss_pred -----CeEEEEEeccCCCCceeeccEeccC----------CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCC
Confidence 36899999 3335567766665421 11222333446666665431 1 6677778888
Q ss_pred ceEEc
Q 045071 398 SWQWI 402 (453)
Q Consensus 398 ~W~~l 402 (453)
+|++-
T Consensus 395 ~~~~~ 399 (450)
T 2vdu_B 395 SFVVN 399 (450)
T ss_dssp EEEEC
T ss_pred eEEEc
Confidence 88643
No 129
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=68.93 E-value=62 Score=28.64 Aligned_cols=108 Identities=11% Similarity=0.081 Sum_probs=54.4
Q ss_pred CC-EEEEEecCCCEEEEEECC-CCcEEEee--cCCcccc-CCC-cee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCC
Q 045071 272 NG-KFYCMNYSPFSVLAYDIS-ANAWFNIQ--APMRRFL-RSP-SLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACG 344 (453)
Q Consensus 272 ~G-~lY~~~~~~~~i~~yD~~-~~~W~~i~--~p~~~~~-~~~-~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~ 344 (453)
+| .+|+.......|..||+. ++++.... ...+... ..+ .++ .-+|+|++... ... .|.+++..+
T Consensus 186 dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~-~~~--------~i~~~d~~~ 256 (314)
T 1pjx_A 186 RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW-GSS--------HIEVFGPDG 256 (314)
T ss_dssp CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE-TTT--------EEEEECTTC
T ss_pred CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc-CCC--------EEEEEcCCC
Confidence 45 578776555789999986 44432211 1111110 111 232 34688887543 111 556666653
Q ss_pred CCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCC
Q 045071 345 TLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 345 ~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
++-...-.++.. ....+.....|+.||+.....+.+..||++..
T Consensus 257 g~~~~~~~~~~~---------~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 257 GQPKMRIRCPFE---------KPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp BSCSEEEECSSS---------CEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CcEeEEEeCCCC---------CceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 333322233310 00111111245668888765679999998764
No 130
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=68.83 E-value=80 Score=29.86 Aligned_cols=110 Identities=10% Similarity=0.214 Sum_probs=57.5
Q ss_pred EEECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 269 VQVNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 269 v~~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
+..+|...+.+.....|..||+.+.+-...-. ........+..++++++++.. + ..+.+|.++. .+
T Consensus 285 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~~~l~~~~~-d------g~i~vwd~~~--~~-- 350 (445)
T 2ovr_B 285 LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLT---GHQSLTSGMELKDNILVSGNA-D------STVKIWDIKT--GQ-- 350 (445)
T ss_dssp EEECSSEEEEEETTSCEEEEETTTCCEEEEEC---CCCSCEEEEEEETTEEEEEET-T------SCEEEEETTT--CC--
T ss_pred EEECCCEEEEEeCCCeEEEEECCCCCEEEEEc---CCcccEEEEEEeCCEEEEEeC-C------CeEEEEECCC--Cc--
Confidence 33466655555545789999998876432211 111112233456666665542 2 2578997653 22
Q ss_pred EEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.+..+.... .....+.++..++..++.....+.+.+||+.+.+.
T Consensus 351 ~~~~~~~~~-------~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 351 CLQTLQGPN-------KHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp EEEEECSTT-------SCSSCEEEEEECSSEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEccCC-------CCCCCEEEEEECCCEEEEEeCCCeEEEEECCCCce
Confidence 233332100 00123444444344444445578999999998764
No 131
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=68.80 E-value=70 Score=29.40 Aligned_cols=189 Identities=7% Similarity=-0.038 Sum_probs=81.5
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccC
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAG 245 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~ 245 (453)
+.+|-.++.+... ..+.++|..+++.... +.. .......+.+.+....+++.++.. ..+.+||..+
T Consensus 136 spdg~~l~sgs~d--~~i~iwd~~~~~~~~~--~~~-h~~~V~~~~~~~~~~~~l~s~s~D--------~~v~iwd~~~- 201 (344)
T 4gqb_B 136 LSSGTQAVSGSKD--ICIKVWDLAQQVVLSS--YRA-HAAQVTCVAASPHKDSVFLSCSED--------NRILLWDTRC- 201 (344)
T ss_dssp CTTSSEEEEEETT--SCEEEEETTTTEEEEE--ECC-CSSCEEEEEECSSCTTEEEEEETT--------SCEEEEETTS-
T ss_pred CCCCCEEEEEeCC--CeEEEEECCCCcEEEE--EcC-cCCceEEEEecCCCCCceeeeccc--------cccccccccc-
Confidence 3455555554432 3688899887764321 110 111223444444332344444321 2457888776
Q ss_pred CCCCcccc-cCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEE-EeecCCccccCCCceeee--CCeEE
Q 045071 246 GFFSLWGT-TSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWF-NIQAPMRRFLRSPSLLDS--NGKLI 319 (453)
Q Consensus 246 ~~~~~W~~-~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~-~i~~p~~~~~~~~~lv~~--~g~L~ 319 (453)
..-.. +..... ........+. ++.+.+.+.....|..||+.+.+-. .+.. +.....-+.. +|.-+
T Consensus 202 ---~~~~~~~~~~~~--~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~----h~~~v~~v~fsp~g~~~ 272 (344)
T 4gqb_B 202 ---PKPASQIGCSAP--GYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAV----HSQCVTGLVFSPHSVPF 272 (344)
T ss_dssp ---SSCEEECC------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEEC----CSSCEEEEEECSSSSCC
T ss_pred ---cceeeeeeccee--eccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcC----CCCCEEEEEEccCCCeE
Confidence 32211 110000 0000011221 3444444444467889999875421 1211 1111122232 34333
Q ss_pred EEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCC
Q 045071 320 LVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 320 vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
++.+..+ ..|+||.+. .+ ++..+.. . ...+.++. .+..++..+...+.|.+|++.+
T Consensus 273 lasgs~D------~~i~vwd~~--~~---~~~~~~~---------H-~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 273 LASLSED------CSLAVLDSS--LS---ELFRSQA---------H-RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEEETT------SCEEEECTT--CC---EEEEECC---------C-SSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEEeCC------CeEEEEECC--CC---cEEEEcC---------C-CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 3333332 257899544 22 2222211 0 01233332 4555665555578899999987
Q ss_pred Cc
Q 045071 397 KS 398 (453)
Q Consensus 397 ~~ 398 (453)
+.
T Consensus 332 ~~ 333 (344)
T 4gqb_B 332 EP 333 (344)
T ss_dssp --
T ss_pred CC
Confidence 54
No 132
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=68.48 E-value=14 Score=34.76 Aligned_cols=107 Identities=13% Similarity=0.017 Sum_probs=40.9
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccc--eecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcc
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGS--LSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHID 243 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~--w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~ 243 (453)
..+|.|++.... ..++.+|+.|++ |+.-. ......+ +..+ -++++++... -....+|.+
T Consensus 7 v~~~~v~~gs~d---g~v~a~d~~tG~~~W~~~~--~~~~s~p---~~~~---g~~~v~~s~d--------g~l~a~d~~ 67 (369)
T 2hz6_A 7 LPETLLFVSTLD---GSLHAVSKRTGSIKWTLKE--DPVLQVP---THVE---EPAFLPDPND--------GSLYTLGSK 67 (369)
T ss_dssp -CTTEEEEEETT---SEEEEEETTTCCEEEEEEC--CCSCCCC-----------CCEEECTTT--------CCEEEC---
T ss_pred eeCCEEEEEcCC---CEEEEEECCCCCEEEEecC--CCceecc---eEcC---CCEEEEeCCC--------CEEEEEECC
Confidence 356777765432 367788888775 43321 1111111 1111 1355544211 123556665
Q ss_pred cCCCCCcccccCCCCCcccCCCCCeEE-ECCEEEEEecCCCEEEEEECCCC--cEEE
Q 045071 244 AGGFFSLWGTTSSLPRLCSLESGRMVQ-VNGKFYCMNYSPFSVLAYDISAN--AWFN 297 (453)
Q Consensus 244 ~~~~~~~W~~~~~~p~~~~~~~~~~v~-~~G~lY~~~~~~~~i~~yD~~~~--~W~~ 297 (453)
+|. ..|+.....+.. .. ...++ .+|.+|+-... ..+.++|++++ .|+.
T Consensus 68 tG~--~~w~~~~~~~~~--~~-~sp~~~~~~~v~~g~~d-g~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 68 NNE--GLTKLPFTIPEL--VQ-ASPCRSSDGILYMGKKQ-DIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp --C--CSEECSCCHHHH--HT-TCSCC-----CCCCEEE-EEEEEECCC--------
T ss_pred CCc--eeeeeeccCccc--cc-cCceEecCCEEEEEeCC-CEEEEEECCCCcEEEEe
Confidence 543 456542211110 01 11222 56777765433 57999999875 4643
No 133
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=68.43 E-value=1.1e+02 Score=31.46 Aligned_cols=175 Identities=10% Similarity=0.099 Sum_probs=81.2
Q ss_pred eeEEEEcCcccceec-CCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCC
Q 045071 181 KTLILCNPVTGSLSQ-LPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPR 259 (453)
Q Consensus 181 ~~~~v~NP~T~~w~~-LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~ 259 (453)
..+.|||..+++... +... ......+...+++-.++..+.+ ....+|+..+ + |.....+..
T Consensus 77 g~i~vw~~~~~~~~~~~~~~----~~~v~~~~~s~~~~~l~~~~~d---------g~i~vw~~~~----~-~~~~~~~~~ 138 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFEAH----PDYIRSIAVHPTKPYVLSGSDD---------LTVKLWNWEN----N-WALEQTFEG 138 (814)
T ss_dssp SEEEEEETTTCCEEEEEECC----SSCEEEEEECSSSSEEEEEETT---------SEEEEEEGGG----T-SEEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEecC----CCCEEEEEEeCCCCEEEEEcCC---------CEEEEEECCC----C-ceEEEEEcC
Confidence 478899988776532 2111 1123345554444344443332 2457788766 2 222111110
Q ss_pred cccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEEE-eecCCccccCCCceeee----CCeEEEEEEEeccCCCCC
Q 045071 260 LCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWFN-IQAPMRRFLRSPSLLDS----NGKLILVAAVEKSKLNVP 332 (453)
Q Consensus 260 ~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~~~~~~~~~lv~~----~g~L~vv~~~~~~~~~~~ 332 (453)
. ...-....+. +|...+.+.....|..||+.+.+-.. +..... .....+.. +|.+++++...
T Consensus 139 ~-~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~~~~~d------- 207 (814)
T 3mkq_A 139 H-EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE---RGVNYVDYYPLPDKPYMITASDD------- 207 (814)
T ss_dssp C-SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCT---TCCCEEEECCSTTCCEEEEECTT-------
T ss_pred C-CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCC---CCEEEEEEEECCCCCEEEEEeCC-------
Confidence 0 0000112333 35555555555789999997654322 111111 11222332 67776665421
Q ss_pred CcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEE---eeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 333 KSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTI---GHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 333 ~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~---~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
..+.+|.+.. . ..+..+.. ....+.++ ..++.|+. ....+.+.+||+.+.+-
T Consensus 208 g~i~~~d~~~--~--~~~~~~~~----------~~~~v~~~~~~~~~~~l~~-~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 208 LTIKIWDYQT--K--SCVATLEG----------HMSNVSFAVFHPTLPIIIS-GSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp SEEEEEETTT--T--EEEEEEEC----------CSSCEEEEEECSSSSEEEE-EETTSCEEEEETTTCSE
T ss_pred CEEEEEECCC--C--cEEEEEcC----------CCCCEEEEEEcCCCCEEEE-EeCCCeEEEEECCCCcE
Confidence 2578886543 2 22333321 00122222 23444444 34467899999987654
No 134
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=67.64 E-value=52 Score=30.50 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=32.2
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEE-eecCCccccCCCcee-eeCC-eEEEEEEEeccCCCCCCcEEEEEeecC
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFN-IQAPMRRFLRSPSLL-DSNG-KLILVAAVEKSKLNVPKSLRLWSLQAC 343 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~~~~~~~~~lv-~~~g-~L~vv~~~~~~~~~~~~~i~vw~ld~~ 343 (453)
++.+.+.+.....|..||+.+.+-.. +... ..... .+. .-+| ++++.+... ..+.||.++..
T Consensus 274 ~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~v~--~~~~s~~~~~~l~s~~~d-------~~i~iw~~~~~ 338 (416)
T 2pm9_A 274 DEHLLLSSGRDNTVLLWNPESAEQLSQFPAR-GNWCF--KTKFAPEAPDLFACASFD-------NKIEVQTLQNL 338 (416)
T ss_dssp CSSCEEEEESSSEEEEECSSSCCEEEEEECS-SSCCC--CEEECTTCTTEEEECCSS-------SEEEEEESCCC
T ss_pred CCCeEEEEeCCCCEEEeeCCCCccceeecCC-CCceE--EEEECCCCCCEEEEEecC-------CcEEEEEccCC
Confidence 45555555544689999998865432 2111 11111 122 1234 566555321 36789988754
No 135
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=66.53 E-value=34 Score=34.79 Aligned_cols=116 Identities=16% Similarity=0.185 Sum_probs=63.1
Q ss_pred CeEEECCEEEEEecCCCEEEEEEC-CCC--cEEEeecCCccc--------cCCCceee--eCCe----EEEEEEEeccCC
Q 045071 267 RMVQVNGKFYCMNYSPFSVLAYDI-SAN--AWFNIQAPMRRF--------LRSPSLLD--SNGK----LILVAAVEKSKL 329 (453)
Q Consensus 267 ~~v~~~G~lY~~~~~~~~i~~yD~-~~~--~W~~i~~p~~~~--------~~~~~lv~--~~g~----L~vv~~~~~~~~ 329 (453)
..++.+|++|+.+.....|.++|. +++ .|+.- ...... .....++. .+|+ ||+... +.
T Consensus 57 tP~v~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~-~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--dg-- 131 (599)
T 1w6s_A 57 APLVVDGKMYIHTSFPNNTFALGLDDPGTILWQDK-PKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--DG-- 131 (599)
T ss_dssp CCEEETTEEEEECSTTTCEEEEETTCTTSEEEEEC-CCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--TS--
T ss_pred ccEEECCEEEEEeCCCCEEEEEeCCCCCcEEEEEC-CCCCccccccccccccccceEEEecCCcceeEEEEEcC--CC--
Confidence 467889999998762257999999 765 58653 221110 01112333 4666 776321 11
Q ss_pred CCCCcEEEEEeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEc-----CCCeEEEEECCCCc--eE
Q 045071 330 NVPKSLRLWSLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIR-----GSDKALLFDLCMKS--WQ 400 (453)
Q Consensus 330 ~~~~~i~vw~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~-----~~~~v~~Yd~~~~~--W~ 400 (453)
.|+.||.. ...|+.- ++..- ..... ...+ +..++.||+... ..+.+..||.++.+ |+
T Consensus 132 ------~l~AlDa~TG~~~W~~~--~~~~~--~~~~~-~ssP---~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~ 197 (599)
T 1w6s_A 132 ------NVAALNAETGETVWKVE--NSDIK--VGSTL-TIAP---YVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWR 197 (599)
T ss_dssp ------EEEEEETTTCCEEEEEE--CCCGG--GTCBC-CSCC---EEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEE
T ss_pred ------EEEEEECCCCCEEEeec--CCCCC--cccee-ecCC---EEECCEEEEEecccccCCCCeEEEEECCCCcEEEE
Confidence 67778764 3357642 22100 00000 0011 124778887542 14789999999875 65
Q ss_pred E
Q 045071 401 W 401 (453)
Q Consensus 401 ~ 401 (453)
.
T Consensus 198 ~ 198 (599)
T 1w6s_A 198 A 198 (599)
T ss_dssp E
T ss_pred E
Confidence 4
No 136
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=66.21 E-value=58 Score=30.84 Aligned_cols=103 Identities=8% Similarity=0.169 Sum_probs=55.8
Q ss_pred ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 271 VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 271 ~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
.+|...+.+.....|..||..+.+-...-. .+......+..++++++++... ..+.||.++. ++ .+
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~~~~~l~sg~~d-------g~i~vwd~~~--~~--~~ 206 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKRILT---GHTGSVLCLQYDERVIITGSSD-------STVRVWDVNT--GE--ML 206 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEEEEC---CCSSCEEEEECCSSEEEEEETT-------SCEEEEESSS--CC--EE
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEEEEc---CCCCcEEEEEECCCEEEEEcCC-------CeEEEEECCC--Cc--EE
Confidence 355555555555689999998876533311 1112223344578877766532 2679997764 32 23
Q ss_pred eecCHHHHHHhhcccCCCcEEEEe-eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIG-HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~-~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
..+.. ....+.++. .++.+ +.+...+.+.+||+.+.+
T Consensus 207 ~~~~~----------h~~~v~~l~~~~~~l-~s~s~dg~i~vwd~~~~~ 244 (435)
T 1p22_A 207 NTLIH----------HCEAVLHLRFNNGMM-VTCSKDRSIAVWDMASPT 244 (435)
T ss_dssp EEECC----------CCSCEEEEECCTTEE-EEEETTSCEEEEECSSSS
T ss_pred EEEcC----------CCCcEEEEEEcCCEE-EEeeCCCcEEEEeCCCCC
Confidence 33321 011233443 34444 444457889999998764
No 137
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=66.20 E-value=60 Score=32.75 Aligned_cols=115 Identities=11% Similarity=0.137 Sum_probs=62.6
Q ss_pred CeEEECCEEEEEecCCCEEEEEECCCC--cEEEeecCCccc-c-----CCCceeeeCCeEEEEEEEeccCCCCCCcEEEE
Q 045071 267 RMVQVNGKFYCMNYSPFSVLAYDISAN--AWFNIQAPMRRF-L-----RSPSLLDSNGKLILVAAVEKSKLNVPKSLRLW 338 (453)
Q Consensus 267 ~~v~~~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~~~~-~-----~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw 338 (453)
.+++.+|++|+.+.. ..|.++|.+++ .|+.- .+.+.. . ....++..+++||+.. .+. .|+
T Consensus 63 ~P~v~~g~vyv~~~~-~~v~AlD~~tG~~~W~~~-~~~~~~~~~~~~~~~~g~a~~~~~v~~~t--~dg--------~l~ 130 (582)
T 1flg_A 63 QAIVSDGVIYVTASY-SRLFALDAKTGKRLWTYN-HRLPDDIRPCCDVVNRGAAIYGDKVFFGT--LDA--------SVV 130 (582)
T ss_dssp CCEEETTEEEEEETT-TEEEEEESSSCCEEEEEE-CCCCTTCCCSSCSCCCCCEEETTEEEEEE--TTT--------EEE
T ss_pred ccEEECCEEEEEcCC-CCEEEEECCCCcEEEEEc-CCCCcccccccccCCCccEEECCEEEEEe--CCC--------EEE
Confidence 457899999998774 35999999875 58653 222110 0 0123445688888643 111 677
Q ss_pred EeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCC------EEEEEEc-----CCCeEEEEECCCCceEE
Q 045071 339 SLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGE------FIVIVIR-----GSDKALLFDLCMKSWQW 401 (453)
Q Consensus 339 ~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~------~I~l~~~-----~~~~v~~Yd~~~~~W~~ 401 (453)
.+|.. ...|+.- +.... ..+ .. ...+. +. ++ .||+... ..+.+..||.++.+-.|
T Consensus 131 AlD~~TG~~~W~~~--~~~~~-~~~-~~-~~sP~--v~-~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 131 ALNKNTGKVVWKKK--FADHG-AGY-TM-TGAPT--IV-KDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp EEESSSCCEEEEEE--CSCGG-GTC-BC-CSCCE--EE-ECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEE
T ss_pred EEECCCCCEEeeec--CCCCC-cCc-cc-ccCCE--Ee-CCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEe
Confidence 77765 3457642 22100 000 00 00111 22 33 6766432 14689999999876444
No 138
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=66.00 E-value=76 Score=28.59 Aligned_cols=205 Identities=9% Similarity=-0.010 Sum_probs=97.3
Q ss_pred CceEEEEecCCCCeeEEEEcCcccceecCCCCCC-CCCcceEEEEEcC-CceEEEEEccCCC-Cc--c------cccccc
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLR-PRLFPSIGLKVTP-TAVDVTVAGDDLI-SP--Y------AVKNLS 236 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~-~r~~~~~~~~~~~-~~ykvv~~g~~~~-~~--~------~~~~~~ 236 (453)
+|.|++.... ..++++|+.+++.+.+..... ......-++.+++ .. ++++...... .. . ....-.
T Consensus 91 ~g~l~v~d~~---~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~ 166 (322)
T 2fp8_A 91 NNQLYIVDCY---YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGR 166 (322)
T ss_dssp TTEEEEEETT---TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEE
T ss_pred CCcEEEEECC---CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCce
Confidence 6777766432 247888988776554432111 1111123466665 43 5666532100 00 0 000123
Q ss_pred eeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE--CC-EEEEEecCCCEEEEEECCCC---cEEEeecCCccccCCCc
Q 045071 237 SESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV--NG-KFYCMNYSPFSVLAYDISAN---AWFNIQAPMRRFLRSPS 310 (453)
Q Consensus 237 ~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~--~G-~lY~~~~~~~~i~~yD~~~~---~W~~i~~p~~~~~~~~~ 310 (453)
..+|+..+ +..+.... .+.....+.+ +| .+|+.......|.+||+... +.+.+.. .+. --.
T Consensus 167 v~~~d~~~----~~~~~~~~-----~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g---P~g 233 (322)
T 2fp8_A 167 LIKYDPST----KETTLLLK-----ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN---PGN 233 (322)
T ss_dssp EEEEETTT----TEEEEEEE-----EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS---EEE
T ss_pred EEEEeCCC----CEEEEecc-----CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC---CCC
Confidence 45566655 43332211 0011122333 34 58888665578999999853 3443321 111 012
Q ss_pred e-eeeCCeEEEEEEEeccCCCC-CCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCe
Q 045071 311 L-LDSNGKLILVAAVEKSKLNV-PKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDK 388 (453)
Q Consensus 311 l-v~~~g~L~vv~~~~~~~~~~-~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~ 388 (453)
+ +.-+|+||+........... ...-.|+++++. ++-.+.-..|... .+ .....+...++.||+.....+.
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~--~~-----~~~~~~~~~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPF--AG-----EHFEQIQEHDGLLYIGTLFHGS 305 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTT--TT-----SCCCEEEEETTEEEEECSSCSE
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCC--cc-----ccceEEEEeCCEEEEeecCCCc
Confidence 3 33578998866531110000 012368888874 4443333344311 01 0112233357899998766789
Q ss_pred EEEEECCCC
Q 045071 389 ALLFDLCMK 397 (453)
Q Consensus 389 v~~Yd~~~~ 397 (453)
+.+|++..+
T Consensus 306 i~~~~~~~~ 314 (322)
T 2fp8_A 306 VGILVYDKK 314 (322)
T ss_dssp EEEEEC---
T ss_pred eEEEecccc
Confidence 999998754
No 139
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=65.96 E-value=82 Score=28.95 Aligned_cols=210 Identities=10% Similarity=0.022 Sum_probs=88.4
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCC-CCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLR-PRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA 244 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~-~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~ 244 (453)
+.+|.++..+.. ..+.+||..+++......... .......++.+.++.-.++..+.+ ..+.+||..+
T Consensus 103 s~d~~~l~~s~d---g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d---------g~v~iwd~~~ 170 (357)
T 4g56_B 103 VSEKGILVASDS---GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD---------FSVKVWDLSQ 170 (357)
T ss_dssp ETTTEEEEEETT---SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT---------SCEEEEETTT
T ss_pred cCCCCEEEEECC---CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC---------CeEEEEECCC
Confidence 334555544432 368889988776443322211 111223345555544344443332 2357787766
Q ss_pred CCCCCcccccCCCCCcccCCCCCeEEE-CC-EEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee---CCeEE
Q 045071 245 GGFFSLWGTTSSLPRLCSLESGRMVQV-NG-KFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS---NGKLI 319 (453)
Q Consensus 245 ~~~~~~W~~~~~~p~~~~~~~~~~v~~-~G-~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~---~g~L~ 319 (453)
+.-.. .+..... .-....+. ++ .+++.......|..||+.+.+-... ...........-++. +++++
T Consensus 171 ----~~~~~--~~~~h~~-~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~~~~~~~v~~v~~sp~~~~~l 242 (357)
T 4g56_B 171 ----KAVLK--SYNAHSS-EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR-IDFCASDTIPTSVTWHPEKDDTF 242 (357)
T ss_dssp ----TEEEE--EECCCSS-CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB-CCCTTCCSCEEEEEECTTSTTEE
T ss_pred ----CcEEE--EEcCCCC-CEEEEEEccCCCceeeeeccCCceEEEECCCCceeee-eeeccccccccchhhhhcccceE
Confidence 32211 1110000 00011221 22 2333333335788899887653221 111111111112232 46676
Q ss_pred EEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCC
Q 045071 320 LVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 320 vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
+++.. + ..++||.+.... .+..+.. ....+.++. .++.+++.....+.+.+||+++
T Consensus 243 a~g~~-d------~~i~~wd~~~~~----~~~~~~~----------~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 243 ACGDE-T------GNVSLVNIKNPD----SAQTSAV----------HSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp EEEES-S------SCEEEEESSCGG----GCEEECC----------CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred EEeec-c------cceeEEECCCCc----EeEEEec----------cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 65542 2 257888765321 1111111 011223332 3444555444467899999998
Q ss_pred CceEEcCCCCCcCCCCCCCCCCCCCceeEEEEecc
Q 045071 397 KSWQWIPRCPYVQANNCGGNYGDGEGELHGFAYEP 431 (453)
Q Consensus 397 ~~W~~l~~~p~~~~~~~~~~~~~~~~~~~~~~f~P 431 (453)
++....- .| ...+..++|.|
T Consensus 302 ~~~~~~~-----~H----------~~~V~~vafsP 321 (357)
T 4g56_B 302 SEVFRDL-----SH----------RDFVTGVAWSP 321 (357)
T ss_dssp CEEEEEC-----CC----------SSCEEEEEECS
T ss_pred CcEeEEC-----CC----------CCCEEEEEEeC
Confidence 7654321 12 12567788877
No 140
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=65.02 E-value=83 Score=28.65 Aligned_cols=110 Identities=9% Similarity=0.190 Sum_probs=54.9
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+|.+...+.....+..+|..++.+..+.. +..+.....-++ -+|++++.+.. + ..+.||.++.. ..+..
T Consensus 72 ~g~~l~s~s~D~~v~iw~~~~~~~~~~~~-~~~h~~~v~~v~~sp~~~~l~s~s~-D------~~v~iwd~~~~-~~~~~ 142 (345)
T 3fm0_A 72 CGNYLASASFDATTCIWKKNQDDFECVTT-LEGHENEVKSVAWAPSGNLLATCSR-D------KSVWVWEVDEE-DEYEC 142 (345)
T ss_dssp TSSEEEEEETTSCEEEEEECCC-EEEEEE-ECCCSSCEEEEEECTTSSEEEEEET-T------SCEEEEEECTT-SCEEE
T ss_pred CCCEEEEEECCCcEEEEEccCCCeEEEEE-ccCCCCCceEEEEeCCCCEEEEEEC-C------CeEEEEECCCC-CCeEE
Confidence 35443444444578888888877654322 111111112222 25777665542 2 36799988753 33443
Q ss_pred EeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
+..+... ...+.++. .++.|. .....+.+.+||..+.+|..
T Consensus 143 ~~~~~~h----------~~~v~~~~~~p~~~~l~-s~s~d~~i~~w~~~~~~~~~ 186 (345)
T 3fm0_A 143 VSVLNSH----------TQDVKHVVWHPSQELLA-SASYDDTVKLYREEEDDWVC 186 (345)
T ss_dssp EEEECCC----------CSCEEEEEECSSSSCEE-EEETTSCEEEEEEETTEEEE
T ss_pred EEEecCc----------CCCeEEEEECCCCCEEE-EEeCCCcEEEEEecCCCEEE
Confidence 4333210 01222222 344443 33346788899988877753
No 141
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=64.98 E-value=75 Score=30.58 Aligned_cols=109 Identities=17% Similarity=0.151 Sum_probs=58.1
Q ss_pred CceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCC
Q 045071 168 GGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGF 247 (453)
Q Consensus 168 ~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~ 247 (453)
+|.|++.... ..+.+++|.+++...+... ...-.++.+++... +|++....... ......++..
T Consensus 152 ~g~Lyv~D~~---~~I~~id~~~g~v~~~~~~----~~~P~giavd~dG~-lyVad~~~~~~----~~gv~~~~~~---- 215 (433)
T 4hw6_A 152 YDDLYWVGQR---DAFRHVDFVNQYVDIKTTN----IGQCADVNFTLNGD-MVVVDDQSSDT----NTGIYLFTRA---- 215 (433)
T ss_dssp TCEEEEECBT---SCEEEEETTTTEEEEECCC----CSCEEEEEECTTCC-EEEEECCSCTT----SEEEEEECGG----
T ss_pred CCEEEEEeCC---CCEEEEECCCCEEEEeecC----CCCccEEEECCCCC-EEEEcCCCCcc----cceEEEEECC----
Confidence 5888876543 5789999988887665431 11223667766554 77765421100 0111223222
Q ss_pred CCcccccCCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcE
Q 045071 248 FSLWGTTSSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAW 295 (453)
Q Consensus 248 ~~~W~~~~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W 295 (453)
..|.....++.. . .....++. +|.||+.......|..||+.++..
T Consensus 216 -~~~~~~~~~~~~-~-~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 216 -SGFTERLSLCNA-R-GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp -GTTCCEEEEEEC-S-SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred -CCeecccccccc-C-CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 233211111110 1 11223332 689999877667899999997765
No 142
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=64.71 E-value=48 Score=29.39 Aligned_cols=109 Identities=11% Similarity=0.185 Sum_probs=56.5
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEe-ecCCcc-ccCCC-cee-eeCCeEEEEEEEecc------CCCCCCcEEEEEeec
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNI-QAPMRR-FLRSP-SLL-DSNGKLILVAAVEKS------KLNVPKSLRLWSLQA 342 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i-~~p~~~-~~~~~-~lv-~~~g~L~vv~~~~~~------~~~~~~~i~vw~ld~ 342 (453)
|.+|+.+.. ..|..||++ ++...+ ...... ....+ .++ .-+|+|++....... .........||+++.
T Consensus 83 g~l~v~~~~-~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 160 (314)
T 1pjx_A 83 NQLFVADMR-LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTT 160 (314)
T ss_dssp SEEEEEETT-TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECT
T ss_pred CcEEEEECC-CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECC
Confidence 778877654 489999998 776554 221111 11112 233 346888875532100 000011247898887
Q ss_pred CCCCeEEEee-cCHHHHHHhhcccCCCcEEEE----eeCCEEEEEEcCCCeEEEEECC
Q 045071 343 CGTLWAEIER-MPQQLYAQFAEIEAGNGFDTI----GHGEFIVIVIRGSDKALLFDLC 395 (453)
Q Consensus 343 ~~~~W~~v~~-mp~~~~~~~~~~~~~~~~~~~----~~g~~I~l~~~~~~~v~~Yd~~ 395 (453)
. ++...+.. +.. ...+... ..|+.+|+.....+.+.+||.+
T Consensus 161 ~-g~~~~~~~~~~~-----------~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 161 D-GQMIQVDTAFQF-----------PNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp T-SCEEEEEEEESS-----------EEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred C-CCEEEeccCCCC-----------cceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 5 55544321 110 0122222 3344688876556789999876
No 143
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=64.31 E-value=83 Score=28.44 Aligned_cols=136 Identities=8% Similarity=0.123 Sum_probs=65.8
Q ss_pred ceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEE-CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee-
Q 045071 236 SSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV-NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD- 313 (453)
Q Consensus 236 ~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~-~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~- 313 (453)
...+|+..+ +.|..+..+..... .-....+. +|.+.+.+.....|..||+.+.++....... ........+.
T Consensus 31 ~v~i~~~~~----~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~ 104 (372)
T 1k8k_C 31 EVHIYEKSG----NKWVQVHELKEHNG-QVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVIL-RINRAARCVRW 104 (372)
T ss_dssp EEEEEEEET----TEEEEEEEEECCSS-CEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECC-CCSSCEEEEEE
T ss_pred EEEEEeCCC----CcEEeeeeecCCCC-cccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEee-cCCCceeEEEE
Confidence 457888777 55544332221000 00112222 4544444444467999999888765442211 1111112222
Q ss_pred -eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeE
Q 045071 314 -SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKA 389 (453)
Q Consensus 314 -~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v 389 (453)
-+|++++++... ..+.+|.++... .|.....+.... ...+.++. .++.++. ....+.+
T Consensus 105 ~~~~~~l~~~~~d-------~~v~i~d~~~~~-~~~~~~~~~~~~---------~~~i~~~~~~~~~~~l~~-~~~dg~i 166 (372)
T 1k8k_C 105 APNEKKFAVGSGS-------RVISICYFEQEN-DWWVCKHIKKPI---------RSTVLSLDWHPNSVLLAA-GSCDFKC 166 (372)
T ss_dssp CTTSSEEEEEETT-------SSEEEEEEETTT-TEEEEEEECTTC---------CSCEEEEEECTTSSEEEE-EETTSCE
T ss_pred CCCCCEEEEEeCC-------CEEEEEEecCCC-cceeeeeeeccc---------CCCeeEEEEcCCCCEEEE-EcCCCCE
Confidence 256666666421 357999998643 344333332100 11233332 3444444 4446889
Q ss_pred EEEECC
Q 045071 390 LLFDLC 395 (453)
Q Consensus 390 ~~Yd~~ 395 (453)
.+||+.
T Consensus 167 ~~~d~~ 172 (372)
T 1k8k_C 167 RIFSAY 172 (372)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 999965
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=63.99 E-value=71 Score=27.51 Aligned_cols=184 Identities=8% Similarity=-0.012 Sum_probs=86.7
Q ss_pred CCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc-CCCCCcccccCCC
Q 045071 179 GAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA-GGFFSLWGTTSSL 257 (453)
Q Consensus 179 ~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~-~~~~~~W~~~~~~ 257 (453)
....++++|+.+++...+..... ...++...+++-.++.. .+ ....+|+..+ +. ...+...
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~----~v~~~~~spdg~~l~~~-~~---------~~i~~~d~~~~~~----~~~~~~~ 81 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPE----LFEAPNWSPDGKYLLLN-SE---------GLLYRLSLAGDPS----PEKVDTG 81 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESS----CCEEEEECTTSSEEEEE-ET---------TEEEEEESSSCCS----CEECCCT
T ss_pred cceeEEEEeCCCCceeeeccCCc----ceEeeEECCCCCEEEEE-cC---------CeEEEEeCCCCCC----ceEeccc
Confidence 34578999998887665543211 12244454444344433 22 1346676655 31 1111111
Q ss_pred CCcccCCCCCeEE-ECCE-EEEEec---CCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCC
Q 045071 258 PRLCSLESGRMVQ-VNGK-FYCMNY---SPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLN 330 (453)
Q Consensus 258 p~~~~~~~~~~v~-~~G~-lY~~~~---~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~ 330 (453)
...... ....+ -+|. +++... ....|..+|..+.+...+..... ...+. -+|+.+++....+
T Consensus 82 ~~~~~~--~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~spdg~~l~~~~~~~---- 150 (297)
T 2ojh_A 82 FATICN--NDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLP-----SYWHGWSPDGKSFTYCGIRD---- 150 (297)
T ss_dssp TCCCBC--SCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSS-----EEEEEECTTSSEEEEEEEET----
T ss_pred cccccc--cceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCC-----ccceEECCCCCEEEEEECCC----
Confidence 100000 11222 2444 444431 13578889988776555422211 11122 2566555333222
Q ss_pred CCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC--CCeEEEEECCCCceEEcC
Q 045071 331 VPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG--SDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 331 ~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~--~~~v~~Yd~~~~~W~~l~ 403 (453)
..++||.++........+...+.. ...+.....|+.|++.... ...++.++..++....+.
T Consensus 151 --~~~~l~~~~~~~~~~~~~~~~~~~----------~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 151 --QVFDIYSMDIDSGVETRLTHGEGR----------NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp --TEEEEEEEETTTCCEEECCCSSSC----------EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred --CceEEEEEECCCCcceEcccCCCc----------cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 256999998765555443322110 0112222346667665532 456666776676666654
No 145
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=62.67 E-value=90 Score=28.24 Aligned_cols=207 Identities=10% Similarity=0.038 Sum_probs=94.3
Q ss_pred ecCceEEEEecCCCCeeEEEEcCccc--ceecCCCCC-----CCCCcceEEEEEcCCceEEEEEccCCCCccccccccee
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTG--SLSQLPPTL-----RPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSE 238 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~--~w~~LP~~~-----~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~e 238 (453)
..+|-+++.... ...+.++|+-.+ ....+.... ......-.++.+++..-++|++.... ...+.
T Consensus 99 d~~g~l~v~d~~--~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~-------~~~I~ 169 (329)
T 3fvz_A 99 DTDGNYWVTDVA--LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC-------NSRIV 169 (329)
T ss_dssp CTTSCEEEEETT--TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS-------CCEEE
T ss_pred CCCCCEEEEECC--CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC-------CCeEE
Confidence 346667766543 247889998655 223332111 11122234677776344566665310 12345
Q ss_pred EEEcccCCCCCcccccCCCC-----CcccCCCCCeEEE--C-CEEEEEecCCCEEEEEECCCCcEEEe-ecCCccccCCC
Q 045071 239 SFHIDAGGFFSLWGTTSSLP-----RLCSLESGRMVQV--N-GKFYCMNYSPFSVLAYDISANAWFNI-QAPMRRFLRSP 309 (453)
Q Consensus 239 vyds~~~~~~~~W~~~~~~p-----~~~~~~~~~~v~~--~-G~lY~~~~~~~~i~~yD~~~~~W~~i-~~p~~~~~~~~ 309 (453)
+|+... ..-..+.... ....+.....+.+ + |.+|+.......|..||+.+++.... ..+.. ...+
T Consensus 170 ~~~~~g----~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~--~~~~ 243 (329)
T 3fvz_A 170 QFSPSG----KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASF--GRNV 243 (329)
T ss_dssp EECTTS----CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTT--TTCE
T ss_pred EEcCCC----CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecccc--CCCc
Confidence 666332 1111111000 0001111123333 4 89999987778999999997665433 22211 1111
Q ss_pred -ceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEE-EEeeCCEEEEEEcCCC
Q 045071 310 -SLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFD-TIGHGEFIVIVIRGSD 387 (453)
Q Consensus 310 -~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~-~~~~g~~I~l~~~~~~ 387 (453)
.+....|.++...+.....-.....+.+|.+ .+++... .+... ......+.. ++..++.||+.....+
T Consensus 244 ~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~--~~g~~~~--~~~~~------~~~~~~p~~ia~~~dG~lyvad~~~~ 313 (329)
T 3fvz_A 244 FAISYIPGFLFAVNGKPYFGDQEPVQGFVMNF--SSGEIID--VFKPV------RKHFDMPHDIVASEDGTVYIGDAHTN 313 (329)
T ss_dssp EEEEEETTEEEEEECCCCTTCSCCCCEEEEET--TTCCEEE--EECCS------SSCCSSEEEEEECTTSEEEEEESSSC
T ss_pred ceeeecCCEEEEeCCCEEeccCCCcEEEEEEc--CCCeEEE--EEcCC------CCccCCeeEEEECCCCCEEEEECCCC
Confidence 1222235555443211000001124455543 3444433 22110 000011222 2233458999887778
Q ss_pred eEEEEECCCC
Q 045071 388 KALLFDLCMK 397 (453)
Q Consensus 388 ~v~~Yd~~~~ 397 (453)
+|..||++.+
T Consensus 314 ~I~~~~~~~~ 323 (329)
T 3fvz_A 314 TVWKFTLTEK 323 (329)
T ss_dssp CEEEEEEEEC
T ss_pred EEEEEeCCcc
Confidence 9999998653
No 146
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=59.95 E-value=26 Score=32.78 Aligned_cols=112 Identities=9% Similarity=0.057 Sum_probs=58.8
Q ss_pred EECCEEEEEecCCCEEEEEECCCC--cEEEeec---CCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCC
Q 045071 270 QVNGKFYCMNYSPFSVLAYDISAN--AWFNIQA---PMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACG 344 (453)
Q Consensus 270 ~~~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~---p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~ 344 (453)
-.+|.+|+.+.+ ..|.++|.+++ .|+.-.. |+-. ...+.. ..+|.++++....+. +||.++..+
T Consensus 8 ~~~~~V~v~t~d-G~l~Ald~~tG~~~W~~~~~~~~p~~~-~~~~~~-~~~~~~~vv~p~~dG--------~l~a~~~~~ 76 (339)
T 2be1_A 8 SLSDILIAADVE-GGLHAVDRRNGHIIWSIEPENFQPLIE-IQEPSR-LETYETLIIEPFGDG--------NIYYFNAHQ 76 (339)
T ss_dssp EEEEEEEEEETT-SCEEEEETTTTEEEEEECGGGSCCSEE-CCCSCT-TTSSEEEEECCSTTT--------EEEEEETTT
T ss_pred eeCCEEEEEeCC-CeEEEEECCCCcEEEEecCCccCCcEE-ecCCcc-ccCCcEEEEEECCCC--------EEEEEECCC
Confidence 456788887766 68999998876 5864311 1111 111111 124566654321111 677777655
Q ss_pred CCeEEEeecCHHHHHHhhcccCCCcEEE-----E------eeCCEEEEEEcCCCeEEEEECCCCceEE
Q 045071 345 TLWAEIERMPQQLYAQFAEIEAGNGFDT-----I------GHGEFIVIVIRGSDKALLFDLCMKSWQW 401 (453)
Q Consensus 345 ~~W~~v~~mp~~~~~~~~~~~~~~~~~~-----~------~~g~~I~l~~~~~~~v~~Yd~~~~~W~~ 401 (453)
+.|+.-..+|... .. .++.. + ..++.||+... .+++++.|+.+++-.|
T Consensus 77 G~~~~~~~~~~lv-----~~---SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~-~g~l~ald~~tG~~~W 135 (339)
T 2be1_A 77 GLQKLPLSIRQLV-----ST---SPLHLKTNIVVNDSGKIVEDEKVYTGSM-RTIMYTINMLNGEIIS 135 (339)
T ss_dssp EEEEEEEEHHHHH-----TT---CSEEEECC----------CCEEEEECEE-EEEEEEEETTTCCEEE
T ss_pred CcEEeeeccccce-----ec---cccccCCCceeecccccccCCEEEEEec-CCEEEEEECCCCcEEE
Confidence 5555433454321 11 11111 1 14666776433 5789999999876444
No 147
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=59.85 E-value=1.2e+02 Score=28.75 Aligned_cols=110 Identities=6% Similarity=-0.004 Sum_probs=53.1
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee-CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEe
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS-NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIE 351 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~-~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~ 351 (453)
|.+.+.+.....|..||+.+.+....... .......-+.. +|++++.+.. + ..+.||.++. .+....-
T Consensus 210 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~h~~~v~~~~~sd~~~l~s~~~-d------~~v~vwd~~~--~~~~~~~ 278 (450)
T 2vdu_B 210 HQFIITSDRDEHIKISHYPQCFIVDKWLF--GHKHFVSSICCGKDYLLLSAGG-D------DKIFAWDWKT--GKNLSTF 278 (450)
T ss_dssp CEEEEEEETTSCEEEEEESCTTCEEEECC--CCSSCEEEEEECSTTEEEEEES-S------SEEEEEETTT--CCEEEEE
T ss_pred CcEEEEEcCCCcEEEEECCCCceeeeeec--CCCCceEEEEECCCCEEEEEeC-C------CeEEEEECCC--CcEeeee
Confidence 55444454446899999987654322110 11111111111 7887776652 2 3678897663 3333222
Q ss_pred ecCHHHHHHhhc-----------c---cCCCcE---EEEeeCCEEEEEEcCCCeEEEEEC
Q 045071 352 RMPQQLYAQFAE-----------I---EAGNGF---DTIGHGEFIVIVIRGSDKALLFDL 394 (453)
Q Consensus 352 ~mp~~~~~~~~~-----------~---~~~~~~---~~~~~g~~I~l~~~~~~~v~~Yd~ 394 (453)
.+.... ..+.. . .....+ .....+..|++.....+.+.+||+
T Consensus 279 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 279 DYNSLI-KPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ECHHHH-GGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred cchhhh-hhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 221110 00000 0 001112 222346778777656789999999
No 148
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=59.79 E-value=93 Score=27.49 Aligned_cols=60 Identities=12% Similarity=0.197 Sum_probs=32.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeec
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQA 342 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~ 342 (453)
+|.+.+.+.....|..||..+.+-..+... .....-+. -+|++++++.. + ..+.+|.++.
T Consensus 235 ~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~-d------g~i~~~~~~~ 296 (337)
T 1gxr_A 235 TGEWLAVGMESSNVEVLHVNKPDKYQLHLH----ESCVLSLKFAYCGKWFVSTGK-D------NLLNAWRTPY 296 (337)
T ss_dssp TSSEEEEEETTSCEEEEETTSSCEEEECCC----SSCEEEEEECTTSSEEEEEET-T------SEEEEEETTT
T ss_pred CCCEEEEEcCCCcEEEEECCCCCeEEEcCC----ccceeEEEECCCCCEEEEecC-C------CcEEEEECCC
Confidence 454444444446799999998765433211 11111122 35776665542 2 2578887664
No 149
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=59.58 E-value=8.9 Score=36.23 Aligned_cols=130 Identities=8% Similarity=0.054 Sum_probs=49.3
Q ss_pred eeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCC--cEEEeecCCccccCCCceeee
Q 045071 237 SESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISAN--AWFNIQAPMRRFLRSPSLLDS 314 (453)
Q Consensus 237 ~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~~~~~~~~~lv~~ 314 (453)
...+|..+|. -.|+... -+ .. ...++.+|.+|+.......|.++|.+++ .|+. ....+.......++..
T Consensus 21 v~a~d~~tG~--~~W~~~~-~~----~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~-~~~~~~~~~~sp~~~~ 91 (369)
T 2hz6_A 21 LHAVSKRTGS--IKWTLKE-DP----VL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKL-PFTIPELVQASPCRSS 91 (369)
T ss_dssp EEEEETTTCC--EEEEEEC-CC----SC-CCC-----CCEEECTTTCCEEEC-----CCSEEC-SCCHHHHHTTCSCC--
T ss_pred EEEEECCCCC--EEEEecC-CC----ce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeee-eccCccccccCceEec
Confidence 4667777765 5787643 11 11 2345567877877544467999999754 4643 1211111111122223
Q ss_pred CCeEEEEEEEeccCCCCCCcEEEEEeecC--CCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEE
Q 045071 315 NGKLILVAAVEKSKLNVPKSLRLWSLQAC--GTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLF 392 (453)
Q Consensus 315 ~g~L~vv~~~~~~~~~~~~~i~vw~ld~~--~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Y 392 (453)
++.||+ +.... .|+.+|.. ...|+.-. +... .....++.||+... .+.+.+|
T Consensus 92 ~~~v~~-g~~dg---------~v~a~D~~tG~~~w~~~~--~~~~-------------~~~p~~~~v~~~~~-dg~v~a~ 145 (369)
T 2hz6_A 92 DGILYM-GKKQD---------IWYVIDLLTGEKQQTLSS--AFAD-------------SLSPSTSLLYLGRT-EYTITMY 145 (369)
T ss_dssp ---CCC-CEEEE---------EEEEECCC-------------------------------------EEEEEE-EEEEECC
T ss_pred CCEEEE-EeCCC---------EEEEEECCCCcEEEEecC--CCcc-------------cccccCCEEEEEec-CCEEEEE
Confidence 555554 32211 45555543 34565311 1100 00114666776532 4678889
Q ss_pred ECCCCc--eEE
Q 045071 393 DLCMKS--WQW 401 (453)
Q Consensus 393 d~~~~~--W~~ 401 (453)
|.++++ |+.
T Consensus 146 d~~tG~~~W~~ 156 (369)
T 2hz6_A 146 DTKTRELRWNA 156 (369)
T ss_dssp CSSSSSCCCEE
T ss_pred ECCCCCEEEeE
Confidence 987754 654
No 150
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=58.71 E-value=1.6e+02 Score=29.99 Aligned_cols=117 Identities=18% Similarity=0.166 Sum_probs=62.7
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccc--eecCCCCCCCC-----Ccc-eEEEEEcCCceEEEEEccCCCCcccccccce
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGS--LSQLPPTLRPR-----LFP-SIGLKVTPTAVDVTVAGDDLISPYAVKNLSS 237 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~--w~~LP~~~~~r-----~~~-~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~ 237 (453)
..+|.|++... ...++.+|+.|++ |+.-+..+... ... .-+..+. .-+||+...+ -..
T Consensus 64 v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~d---------g~l 129 (668)
T 1kv9_A 64 FHDGVIYTSMS---WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GDKVYVGTLD---------GRL 129 (668)
T ss_dssp EETTEEEEEEG---GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BTEEEEECTT---------SEE
T ss_pred EECCEEEEECC---CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CCEEEEEcCC---------CEE
Confidence 35777777654 2367888888775 66543322100 000 0011221 1266665432 133
Q ss_pred eEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecC-----CCEEEEEECCCCc--EEEe
Q 045071 238 ESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYS-----PFSVLAYDISANA--WFNI 298 (453)
Q Consensus 238 evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~~yD~~~~~--W~~i 298 (453)
..+|.++|. -.|+.-..-+..........++.+|++|+.... ...|.+||.++++ |+.-
T Consensus 130 ~alD~~tG~--~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGK--AIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCC--EEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCC--EeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 667777765 578864321111111113457789999986542 2579999998764 8653
No 151
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=58.26 E-value=99 Score=27.33 Aligned_cols=102 Identities=14% Similarity=0.246 Sum_probs=48.1
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
+.+.+.+.....|..||+.+.+-... .+ ........+. -+|++++++... ..+.+|.+.. .+- +
T Consensus 119 ~~~l~s~~~d~~i~iwd~~~~~~~~~-~~--~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~wd~~~--~~~--~ 184 (312)
T 4ery_A 119 SNLIVSGSFDESVRIWDVKTGKCLKT-LP--AHSDPVSAVHFNRDGSLIVSSSYD-------GLCRIWDTAS--GQC--L 184 (312)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEE-EC--CCSSCEEEEEECTTSSEEEEEETT-------SCEEEEETTT--CCE--E
T ss_pred CCEEEEEeCCCcEEEEECCCCEEEEE-ec--CCCCcEEEEEEcCCCCEEEEEeCC-------CcEEEEECCC--Cce--e
Confidence 33333344446799999988654322 11 1111111122 357776666422 2578887653 222 2
Q ss_pred eecCHHHHHHhhcccCCCcEEEE---eeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTI---GHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~---~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
..+... ....+.++ ..++.++. ....+.+.+||+.+.+
T Consensus 185 ~~~~~~---------~~~~~~~~~~~~~~~~l~~-~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 185 KTLIDD---------DNPPVSFVKFSPNGKYILA-ATLDNTLKLWDYSKGK 225 (312)
T ss_dssp EEECCS---------SCCCEEEEEECTTSSEEEE-EETTTEEEEEETTTTE
T ss_pred eEEecc---------CCCceEEEEECCCCCEEEE-EcCCCeEEEEECCCCc
Confidence 222110 00112222 23444443 3346788888888764
No 152
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=58.14 E-value=1e+02 Score=28.83 Aligned_cols=118 Identities=13% Similarity=0.069 Sum_probs=59.2
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEee-cCC------cccc--CCCceee---eCCeEEEEEEEeccCCCCCCcEEEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQ-APM------RRFL--RSPSLLD---SNGKLILVAAVEKSKLNVPKSLRLWS 339 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~-~p~------~~~~--~~~~lv~---~~g~L~vv~~~~~~~~~~~~~i~vw~ 339 (453)
++.+|+.... ..+.+.|..+..-..+. .+. .... .....+. -+++||+........-.....=.||.
T Consensus 224 ~~~~~~~~~~-~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 224 SGRIVWPVYS-GKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred CCEEEEEcCC-ceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 4666766643 57888888765322211 000 0000 0111122 34778875532110000001126888
Q ss_pred eecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCC-EEEEEEcCCCeEEEEECCCCceE
Q 045071 340 LQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGE-FIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 340 ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~-~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
+|. ...+.+.+++..- ....+.....|. ++|+.....+.+.+||.++.+-.
T Consensus 303 ID~--~t~~vv~~i~~g~--------~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 303 VTG--LVGQTSSQISLGH--------DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred EEC--CCCEEEEEEECCC--------CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 885 4555566664310 012344445567 66766545789999999886643
No 153
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=57.77 E-value=86 Score=28.32 Aligned_cols=54 Identities=9% Similarity=0.172 Sum_probs=26.7
Q ss_pred CCEEEEEECCCCcEEEeecCCccccC-CCceeee----CCeEEEEEEEeccCCCCCCcEEEEEeec
Q 045071 282 PFSVLAYDISANAWFNIQAPMRRFLR-SPSLLDS----NGKLILVAAVEKSKLNVPKSLRLWSLQA 342 (453)
Q Consensus 282 ~~~i~~yD~~~~~W~~i~~p~~~~~~-~~~lv~~----~g~L~vv~~~~~~~~~~~~~i~vw~ld~ 342 (453)
...|..||..+++|..+......+.. ....++. ++++++.++ .+ ..++||.++.
T Consensus 270 dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s-~D------g~v~~W~~~~ 328 (330)
T 2hes_X 270 DGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGG-DD------GIVNFWSLEK 328 (330)
T ss_dssp TSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEE-TT------SEEEEEEC--
T ss_pred CCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEec-CC------CcEEEEEecc
Confidence 36788999988888654221111111 1122222 456665554 22 3679998763
No 154
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=55.79 E-value=5.6 Score=24.84 Aligned_cols=25 Identities=16% Similarity=0.355 Sum_probs=20.5
Q ss_pred ccccccccCCChHHHHHHHHhcCCh
Q 045071 44 PWMDSRIWSKLPQRLLDRVLAFLPP 68 (453)
Q Consensus 44 ~~~~~~~w~~LP~dll~~IL~rLp~ 68 (453)
+--|+..+..||.|+.++||+--..
T Consensus 14 ~~VD~eVF~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 14 EGVDQEVFKQLPADIQEEILSGKSR 38 (48)
T ss_dssp TTCCGGGTTTSCHHHHHHHTTCCCS
T ss_pred CCCCHHHHHHCcHHHHHHHHhcchH
Confidence 4567889999999999999986543
No 155
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=54.56 E-value=80 Score=32.76 Aligned_cols=104 Identities=12% Similarity=0.262 Sum_probs=55.5
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee--C--CeEEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS--N--GKLILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~--~--g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
|.+.+.+.....|..||..++.+..+.. ...+.....-+.. + |++++.++.. ..+.||.++. +.|.
T Consensus 21 g~~latg~~dg~I~vwd~~~~~~~~~~~-l~~h~~~V~~l~~s~~~~~~~l~s~s~D-------g~I~vwd~~~--~~~~ 90 (753)
T 3jro_A 21 GKRLATCSSDKTIKIFEVEGETHKLIDT-LTGHEGPVWRVDWAHPKFGTILASCSYD-------GKVLIWKEEN--GRWS 90 (753)
T ss_dssp SCCEEEEETTTEEEEEEEETTEEEEEEE-ECCCSSCEEEEEECCTTSCSEEEEEETT-------SCEEEEEEET--TEEE
T ss_pred CCeEEEEECCCcEEEEecCCCCCcccee-ccCCcCceEEEEecCCCCCCEEEEEeCC-------CeEEEEECCC--Cccc
Confidence 3333333334678889888776655422 1111122222332 2 6776666522 2679998874 5676
Q ss_pred EEeecCHHHHHHhhcccCCCcEEEEe---e--CCEEEEEEcCCCeEEEEECCCC
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDTIG---H--GEFIVIVIRGSDKALLFDLCMK 397 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~~~---~--g~~I~l~~~~~~~v~~Yd~~~~ 397 (453)
.+..+... ...+.++. . ++.++. ....+.+.+||+.+.
T Consensus 91 ~~~~~~~h----------~~~V~~v~~sp~~~~~~l~s-gs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 91 QIAVHAVH----------SASVNSVQWAPHEYGPLLLV-ASSDGKVSVVEFKEN 133 (753)
T ss_dssp EEEEECCC----------SSCEEEEEECCGGGCSEEEE-EETTSEEEEEECCSS
T ss_pred ccccccCC----------CCCeEEEEECCCCCCCEEEE-EeCCCcEEEEEeecC
Confidence 66555320 11233332 2 444444 444688999999876
No 156
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=53.55 E-value=1.2e+02 Score=27.02 Aligned_cols=24 Identities=8% Similarity=0.173 Sum_probs=15.3
Q ss_pred eCCEEEEEEcCCCeEEEEECCCCce
Q 045071 375 HGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 375 ~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.++.++.. ...+.+.+||+.+.+.
T Consensus 229 ~~~~l~~~-~~d~~i~v~d~~~~~~ 252 (369)
T 3zwl_B 229 DLTYFITS-SRDTNSFLVDVSTLQV 252 (369)
T ss_dssp TSSEEEEE-ETTSEEEEEETTTCCE
T ss_pred CCCEEEEe-cCCceEEEEECCCCce
Confidence 34445443 3467889999887654
No 157
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=53.36 E-value=1.2e+02 Score=26.77 Aligned_cols=110 Identities=14% Similarity=0.132 Sum_probs=52.2
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+|.+.+.+.....|..||+.+.+........ .......+. -+|+.++++.. + ..+.+|.+.. . +.
T Consensus 160 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~-d------~~i~iwd~~~--~--~~ 226 (312)
T 4ery_A 160 DGSLIVSSSYDGLCRIWDTASGQCLKTLIDD--DNPPVSFVKFSPNGKYILAATL-D------NTLKLWDYSK--G--KC 226 (312)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEECCS--SCCCEEEEEECTTSSEEEEEET-T------TEEEEEETTT--T--EE
T ss_pred CCCEEEEEeCCCcEEEEECCCCceeeEEecc--CCCceEEEEECCCCCEEEEEcC-C------CeEEEEECCC--C--cE
Confidence 4554444444467999999987643321110 001111222 35666665542 2 2578887653 2 22
Q ss_pred EeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
+..+... ..............++..++.....+.+.+||+.+++-
T Consensus 227 ~~~~~~~-----~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 227 LKTYTGH-----KNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp EEEECSS-----CCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCE
T ss_pred EEEEEec-----CCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchh
Confidence 2222110 00000001111223444455555578899999988764
No 158
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=53.31 E-value=1.4e+02 Score=27.42 Aligned_cols=102 Identities=16% Similarity=0.138 Sum_probs=48.5
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-cee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
++.++... ....|..||+.+.+-...... ..... .+. .-++++++++.. + ..+.+|.++......
T Consensus 217 ~~~~~~~~-~~g~i~~~d~~~~~~~~~~~~---~~~~i~~~~~~~~~~~l~~~~~-d------~~i~i~d~~~~~~~~-- 283 (425)
T 1r5m_A 217 DDKFVIPG-PKGAIFVYQITEKTPTGKLIG---HHGPISVLEFNDTNKLLLSASD-D------GTLRIWHGGNGNSQN-- 283 (425)
T ss_dssp TTEEEEEC-GGGCEEEEETTCSSCSEEECC---CSSCEEEEEEETTTTEEEEEET-T------SCEEEECSSSBSCSE--
T ss_pred CCEEEEEc-CCCeEEEEEcCCCceeeeecc---CCCceEEEEECCCCCEEEEEcC-C------CEEEEEECCCCccce--
Confidence 45544433 336899999998643222111 11111 122 235666665542 2 257888766422211
Q ss_pred EeecCHHHHHHhhcccCCCcEEEE--eeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTI--GHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~--~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.+.. . ...+.++ ..++ .++.....+.+.+||+.+.+-
T Consensus 284 --~~~~---------~-~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 284 --CFYG---------H-SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTL 322 (425)
T ss_dssp --EECC---------C-SSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEE
T ss_pred --EecC---------C-CccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcE
Confidence 1110 0 0112222 1233 444444568899999987653
No 159
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=53.09 E-value=91 Score=27.77 Aligned_cols=115 Identities=10% Similarity=0.073 Sum_probs=61.9
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccc-cCCC-ce-eeeCCeEEEEE----EEec----cCCCCCCcEEEEEe
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRF-LRSP-SL-LDSNGKLILVA----AVEK----SKLNVPKSLRLWSL 340 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~-~~~~-~l-v~~~g~L~vv~----~~~~----~~~~~~~~i~vw~l 340 (453)
+|.+|+.......|..||.. ++.+.+....... ...+ .+ +.-+|+|++.. .... ........-.||.+
T Consensus 96 dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 96 QQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 57888776554689999987 6666553221111 1111 23 34578988742 1000 00000123589999
Q ss_pred ecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-----CCeEEEEECCCCc
Q 045071 341 QACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-----SDKALLFDLCMKS 398 (453)
Q Consensus 341 d~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-----~~~v~~Yd~~~~~ 398 (453)
+..+++.+.+..+. ...++.....+..+|+.... ...+.+||+..+.
T Consensus 175 d~~~g~~~~~~~~~-----------~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 175 PPDGSPLQRMADLD-----------HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp CSSSCCCEEEEEES-----------SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred cCCCCcEEEEecCC-----------CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 98767776653111 00123333346678887553 2689999987643
No 160
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=53.03 E-value=79 Score=29.97 Aligned_cols=97 Identities=12% Similarity=0.155 Sum_probs=49.0
Q ss_pred ecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHH
Q 045071 279 NYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLY 358 (453)
Q Consensus 279 ~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~ 358 (453)
+.....|..||+.+++-... . ..+......+..+++.++.+... ..+++|.++.....+.. .-.
T Consensus 328 g~~dg~i~vwd~~~~~~~~~-~--~~h~~~v~~~~~~~~~l~s~s~d-------g~v~vwd~~~~~~~~~~--~~~---- 391 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGELMYT-L--QGHTALVGLLRLSDKFLVSAAAD-------GSIRGWDANDYSRKFSY--HHT---- 391 (464)
T ss_dssp EETTSCEEEEETTTTEEEEE-E--CCCSSCEEEEEECSSEEEEEETT-------SEEEEEETTTCCEEEEE--ECT----
T ss_pred EeCCCcEEEEECCCCcEEEE-E--eCCCCcEEEEEEcCCEEEEEeCC-------CcEEEEECCCCceeeee--cCC----
Confidence 33335788899887653222 1 11112223345566666655422 25789977643221211 111
Q ss_pred HHhhcccCCCcEEEEe-eCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 359 AQFAEIEAGNGFDTIG-HGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 359 ~~~~~~~~~~~~~~~~-~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
......++. .+..+.. .. .+.+.+||+++++..
T Consensus 392 -------~~~~~~~~~~~~~~l~~-~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 392 -------NLSAITTFYVSDNILVS-GS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp -------TCCCEEEEEECSSEEEE-EE-TTEEEEEETTTCCEE
T ss_pred -------CCccEEEEEeCCCEEEE-ec-CCeEEEEECCCCcEE
Confidence 011222333 3444443 33 589999999988754
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=52.98 E-value=1.1e+02 Score=28.20 Aligned_cols=120 Identities=8% Similarity=0.084 Sum_probs=60.6
Q ss_pred CCE-EEEEecCCCEEEEEECC-CCcEEEee-cCCccccCCCc-e-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCC
Q 045071 272 NGK-FYCMNYSPFSVLAYDIS-ANAWFNIQ-APMRRFLRSPS-L-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTL 346 (453)
Q Consensus 272 ~G~-lY~~~~~~~~i~~yD~~-~~~W~~i~-~p~~~~~~~~~-l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~ 346 (453)
+|+ +|+.......|..||+. +++...+. ...+.....+. + +.-+|+.+.+.. .. ...+.+|.++..+++
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~-~~-----~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALM-EA-----GNRICEYVIDPATHM 228 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEE-TT-----TTEEEEEEECTTTCC
T ss_pred CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEE-CC-----CCeEEEEEEeCCCCc
Confidence 464 66655444689999998 67664331 11111011222 2 223565443332 11 236789988865555
Q ss_pred eE----EEeecCHHHHHHhhccc-------CCCcEE-EEeeCCEEEEEEcCCC-----eEEEEECC-CCceEE
Q 045071 347 WA----EIERMPQQLYAQFAEIE-------AGNGFD-TIGHGEFIVIVIRGSD-----KALLFDLC-MKSWQW 401 (453)
Q Consensus 347 W~----~v~~mp~~~~~~~~~~~-------~~~~~~-~~~~g~~I~l~~~~~~-----~v~~Yd~~-~~~W~~ 401 (453)
.. .+..+|... .... ....+. ....|..||+.....+ .+.+||++ +++...
T Consensus 229 ~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 229 PVYTHHSFPLIPPGI----PDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEEEEEESSCTTC----CCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred EEEccceEEcCCCCc----CCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 43 344555421 0000 001122 2235678888765433 79999986 566553
No 162
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=52.97 E-value=1.3e+02 Score=27.13 Aligned_cols=101 Identities=14% Similarity=0.213 Sum_probs=49.6
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
++.+.. +.....|..||+.+++-...-. .+.....-+. -++++++.+.. + ..+++|.+.. .. .
T Consensus 154 ~~~l~s-~s~d~~i~~wd~~~~~~~~~~~---~h~~~v~~~~~~~~~~~l~sg~~-d------~~v~~wd~~~--~~--~ 218 (340)
T 1got_B 154 DNQIVT-SSGDTTCALWDIETGQQTTTFT---GHTGDVMSLSLAPDTRLFVSGAC-D------ASAKLWDVRE--GM--C 218 (340)
T ss_dssp TTEEEE-EETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEET-T------SCEEEEETTT--CS--E
T ss_pred CCcEEE-EECCCcEEEEECCCCcEEEEEc---CCCCceEEEEECCCCCEEEEEeC-C------CcEEEEECCC--Ce--e
Confidence 455433 3333679999999876533211 1111111122 25677665542 2 3679997653 22 2
Q ss_pred EeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
+..+.. . ...+.++. .++.+ +.....+.+.+||+.+.+
T Consensus 219 ~~~~~~---------h-~~~v~~v~~~p~~~~l-~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 219 RQTFTG---------H-ESDINAICFFPNGNAF-ATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp EEEECC---------C-SSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTE
T ss_pred EEEEcC---------C-cCCEEEEEEcCCCCEE-EEEcCCCcEEEEECCCCc
Confidence 222221 0 01222222 34444 444446789999998764
No 163
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=52.34 E-value=1.4e+02 Score=28.60 Aligned_cols=116 Identities=10% Similarity=0.066 Sum_probs=61.1
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeec-C------Cccc---cCCCcee-e-eCCeEEEEEEEeccCCCCCCcEEEEEe
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQA-P------MRRF---LRSPSLL-D-SNGKLILVAAVEKSKLNVPKSLRLWSL 340 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~-p------~~~~---~~~~~lv-~-~~g~L~vv~~~~~~~~~~~~~i~vw~l 340 (453)
+.+|+.... ..+.++|..++.-..+.. + .... .....++ . -+++||+........-+....=.|+++
T Consensus 277 ~~~~~~s~~-g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVI 355 (426)
T 3c75_H 277 GRLVWPTYT-GKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVL 355 (426)
T ss_dssp CEEEEEBTT-SEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEE
T ss_pred CEEEEEeCC-CcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEE
Confidence 456666554 578888887654332210 0 0000 0001122 2 347888866432100000012268888
Q ss_pred ecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCC-EEEEEEcCCCeEEEEECCCCce
Q 045071 341 QACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGE-FIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 341 d~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~-~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
|. ..++.+.+++..- ....+.....|. ++|+.....+.|.++|..+.+-
T Consensus 356 D~--~T~kvv~~I~vg~--------~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 356 NA--ETGERINKIELGH--------EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp ET--TTCCEEEEEEEEE--------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCE
T ss_pred EC--CCCeEEEEEECCC--------CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCE
Confidence 85 5566666664310 012344445677 8888876689999999988764
No 164
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=52.17 E-value=2e+02 Score=29.06 Aligned_cols=158 Identities=11% Similarity=0.006 Sum_probs=81.9
Q ss_pred ceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCe-EE--ECCEEEEEecCC
Q 045071 206 PSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRM-VQ--VNGKFYCMNYSP 282 (453)
Q Consensus 206 ~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~-v~--~~G~lY~~~~~~ 282 (453)
...++.++...-+||++.... .....++.+. ..++.+..-. .....+ ++ .++.|||.....
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~--------~~I~r~~~~g----~~~~~v~~~~----~~~p~GlAvD~~~~~lY~tD~~~ 413 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEV--------RAIRRSFIDG----SGSQFVVTAQ----IAHPDGIAVDWVARNLYWTDTGT 413 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTT--------TEEEEEETTS----CSCEEEECSS----CSCCCEEEEETTTTEEEEEETTT
T ss_pred ccEEEEEEcCCCeEEEEeCCC--------CeEEEEEcCC----CccEEEEECC----CCCcCceEEecccCcEEEEeCCC
Confidence 345777776556788775421 2234445544 3444432111 111123 33 368999998777
Q ss_pred CEEEEEECCCCcEEEeecCCccccCCC-ceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHH
Q 045071 283 FSVLAYDISANAWFNIQAPMRRFLRSP-SLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYA 359 (453)
Q Consensus 283 ~~i~~yD~~~~~W~~i~~p~~~~~~~~-~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~ 359 (453)
..|.+.++....-+.+.. .....+ .|+. .+|.||+... ... -+|++.+.+...=+.+.. .
T Consensus 414 ~~I~v~~~~G~~~~~l~~---~~l~~P~~iavdp~~G~ly~tD~-g~~-------~~I~r~~~dG~~~~~l~~--~---- 476 (619)
T 3s94_A 414 DRIEVTRLNGTMRKILIS---EDLEEPRAIVLDPMVGYMYWTDW-GEI-------PKIERAALDGSDRVVLVN--T---- 476 (619)
T ss_dssp TEEEEEETTSCSCEEEEC---TTCCSEEEEEEETTTTEEEEEEC-SSS-------CEEEEEETTSCSCEEEEC--S----
T ss_pred CcEEEEeCCCCeEEEEEE---CCCCCeeeEEEEcCCCcEEEecC-CCC-------CEEEEEccCCCccEEEEe--C----
Confidence 899999998765444321 112333 3443 3589997552 111 156665543222222211 0
Q ss_pred HhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 360 QFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 360 ~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.+.. ..++..-..+++||+.....++|..+|++...-
T Consensus 477 ~l~~---P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~~~ 513 (619)
T 3s94_A 477 SLGW---PNGLALDYDEGKIYWGDAKTDKIEVMNTDGTGR 513 (619)
T ss_dssp SCSC---EEEEEEETTTTEEEEEETTTTEEEEEESSSCCC
T ss_pred CCCC---CeeeEEcccCCEEEEEECCCCEEEEEecCCCce
Confidence 0000 012222224778988876677888888865543
No 165
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=51.79 E-value=1.3e+02 Score=26.60 Aligned_cols=20 Identities=15% Similarity=-0.036 Sum_probs=13.5
Q ss_pred EEecCCCEEEEEECCCCcEE
Q 045071 277 CMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 277 ~~~~~~~~i~~yD~~~~~W~ 296 (453)
+.......|..+|+.+.+..
T Consensus 5 v~~~~~~~v~~~d~~~~~~~ 24 (337)
T 1pby_B 5 LAPARPDKLVVIDTEKMAVD 24 (337)
T ss_dssp EEEETTTEEEEEETTTTEEE
T ss_pred EEcCCCCeEEEEECCCCcEE
Confidence 33334468999999887653
No 166
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=51.74 E-value=1.4e+02 Score=29.79 Aligned_cols=116 Identities=14% Similarity=0.085 Sum_probs=61.6
Q ss_pred cCceEEEEecCCCCeeEEEEcC-cccc--eecCCCCCCC-----CCc-ceEEEEEcCCceEEEEEccCCCCcccccccce
Q 045071 167 SGGLVCWVSDHAGAKTLILCNP-VTGS--LSQLPPTLRP-----RLF-PSIGLKVTPTAVDVTVAGDDLISPYAVKNLSS 237 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP-~T~~--w~~LP~~~~~-----r~~-~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~ 237 (453)
.+|.|++.... ...++.+|+ .|++ |+.-+..... .+. ..-+..+. .-+||+...+ -..
T Consensus 61 ~~g~vyv~~~~--~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~~~d---------g~l 127 (571)
T 2ad6_A 61 IGDMMYVHSAF--PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYG--AGQIVKKQAN---------GHL 127 (571)
T ss_dssp ETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEE--TTEEEEECTT---------SEE
T ss_pred ECCEEEEEeCC--CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEE--CCEEEEEeCC---------CEE
Confidence 47888776541 136888898 7775 6653332110 000 00012222 1266665432 123
Q ss_pred eEEEcccCCCCCcccccCCCC-CcccCCCCCeEEECCEEEEEecC-----CCEEEEEECCCC--cEEEe
Q 045071 238 ESFHIDAGGFFSLWGTTSSLP-RLCSLESGRMVQVNGKFYCMNYS-----PFSVLAYDISAN--AWFNI 298 (453)
Q Consensus 238 evyds~~~~~~~~W~~~~~~p-~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~~yD~~~~--~W~~i 298 (453)
..+|.++|. -.|+.-..-+ ...... ...++.+|++|+.... ...|.+||.+++ .|+.-
T Consensus 128 ~alD~~tG~--~~W~~~~~~~~~~~~~~-~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 128 LALDAKTGK--INWEVEVCDPKVGSTLT-QAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEETTTCC--EEEEEECCCGGGTCBCC-SCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCC--EEEEecCCCCCccceec-cCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 556776755 5787532111 000111 3456789999987642 368999999875 47653
No 167
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=51.49 E-value=2.2e+02 Score=29.21 Aligned_cols=117 Identities=20% Similarity=0.133 Sum_probs=63.0
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccc--eecCCCCCCC-----CCcc-eEEEEEcCCceEEEEEccCCCCcccccccce
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGS--LSQLPPTLRP-----RLFP-SIGLKVTPTAVDVTVAGDDLISPYAVKNLSS 237 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~--w~~LP~~~~~-----r~~~-~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~ 237 (453)
..+|.|++... ...++.+|+.|++ |+.-+..... .+.. ..+..+.. -+||+...+ -..
T Consensus 68 v~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~v~v~~~d---------g~l 133 (689)
T 1yiq_A 68 VVDGVMYTTGP---FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK--GKVYVGVLD---------GRL 133 (689)
T ss_dssp EETTEEEEECG---GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEET--TEEEEECTT---------SEE
T ss_pred EECCEEEEEcC---CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEEC--CEEEEEccC---------CEE
Confidence 35778877653 2368888988876 7654332210 0000 00122221 266665432 133
Q ss_pred eEEEcccCCCCCcccccCC-CCCcccCCCCCeEEECCEEEEEecC-----CCEEEEEECCCCc--EEEe
Q 045071 238 ESFHIDAGGFFSLWGTTSS-LPRLCSLESGRMVQVNGKFYCMNYS-----PFSVLAYDISANA--WFNI 298 (453)
Q Consensus 238 evyds~~~~~~~~W~~~~~-~p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~~yD~~~~~--W~~i 298 (453)
..+|.++|. -.|+.-.. -+..........++.+|++|+-... ...|.+||.++++ |+.-
T Consensus 134 ~AlDa~TG~--~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQ--RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCC--EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCC--EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 667777765 56876432 1110011113457789999986432 3589999999865 8654
No 168
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=50.72 E-value=1.5e+02 Score=28.53 Aligned_cols=119 Identities=9% Similarity=-0.027 Sum_probs=59.8
Q ss_pred CEEEEEecCC----CEEEEEECCCCcEEE-eecCCccccCCCceee-e-CCeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 273 GKFYCMNYSP----FSVLAYDISANAWFN-IQAPMRRFLRSPSLLD-S-NGKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 273 G~lY~~~~~~----~~i~~yD~~~~~W~~-i~~p~~~~~~~~~lv~-~-~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
..+|+..... ..|.++|+.+.+-.. ++... .+.++. - +.+||+..............=.|..+|..+.
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~-----~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF-----LPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS-----SCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC-----CCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 4678877643 589999999876532 33221 123432 2 4456665532100000000115777786554
Q ss_pred CeEEEeecC-HHHHHHhhcccCCCcEEEEeeCCEEEEEEcC-CCeEEEEECCCCce
Q 045071 346 LWAEIERMP-QQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-SDKALLFDLCMKSW 399 (453)
Q Consensus 346 ~W~~v~~mp-~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-~~~v~~Yd~~~~~W 399 (453)
+=..--.++ ... +........+.....|.++|+.... .+.+.++|..+++-
T Consensus 160 ~vv~~I~v~g~~r---~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 160 LPIADIELPDAPR---FLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp CEEEEEEETTCCC---CCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred cEEEEEECCCccc---cccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 432211222 000 0000001234445567889988754 57899999988764
No 169
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=49.85 E-value=1.4e+02 Score=26.61 Aligned_cols=65 Identities=11% Similarity=0.236 Sum_probs=31.5
Q ss_pred CeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEE
Q 045071 316 GKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLF 392 (453)
Q Consensus 316 g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Y 392 (453)
|++++++.. + ..+.||.++........+..+... .....+.++. .++.|+ .....+.+.+|
T Consensus 299 ~~~l~~~~~-d------g~i~vwd~~~~~~~~~~~~~~~~~--------~~~~~v~~~~~s~~~~~l~-s~~~dg~i~iw 362 (366)
T 3k26_A 299 QKMLALGNQ-V------GKLYVWDLEVEDPHKAKCTTLTHH--------KCGAAIRQTSFSRDSSILI-AVCDDASIWRW 362 (366)
T ss_dssp SSEEEEECT-T------SCEEEEECCSSSGGGCEEEEECCT--------TCCSCEEEEEECTTSSEEE-EEETTSEEEEE
T ss_pred CcEEEEEec-C------CcEEEEECCCCCCccccceEEccc--------ccCCceEEEEeCCCCCeEE-EEeCCCEEEEE
Confidence 777766632 1 367999887543222233333220 0011233222 344444 44446889999
Q ss_pred ECCC
Q 045071 393 DLCM 396 (453)
Q Consensus 393 d~~~ 396 (453)
|+.+
T Consensus 363 d~~~ 366 (366)
T 3k26_A 363 DRLR 366 (366)
T ss_dssp EC--
T ss_pred EecC
Confidence 9854
No 170
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=48.94 E-value=2.3e+02 Score=28.87 Aligned_cols=115 Identities=17% Similarity=0.149 Sum_probs=62.7
Q ss_pred cCceEEEEecCCCCeeEEEEcCcccc--eecCCCCCCCC-----C-cceEEEEEcCCceEEEEEccCCCCccccccccee
Q 045071 167 SGGLVCWVSDHAGAKTLILCNPVTGS--LSQLPPTLRPR-----L-FPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSE 238 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP~T~~--w~~LP~~~~~r-----~-~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~e 238 (453)
.+|.|++... ...++.+|+.|++ |+.-+...... + ...-++.++. -+||+...+ -...
T Consensus 76 ~~g~vyv~~~---~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~--~~v~v~~~d---------g~l~ 141 (677)
T 1kb0_A 76 VDGIMYVSAS---WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK--GKVYVGAWD---------GRLI 141 (677)
T ss_dssp ETTEEEEECG---GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET--TEEEEECTT---------SEEE
T ss_pred ECCEEEEECC---CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC--CEEEEEcCC---------CEEE
Confidence 5788877654 2368888988876 65543322100 0 0000122221 266665432 1235
Q ss_pred EEEcccCCCCCcccccCC-C-CCcccCCCCCeEEECCEEEEEecC-----CCEEEEEECCCCc--EEEe
Q 045071 239 SFHIDAGGFFSLWGTTSS-L-PRLCSLESGRMVQVNGKFYCMNYS-----PFSVLAYDISANA--WFNI 298 (453)
Q Consensus 239 vyds~~~~~~~~W~~~~~-~-p~~~~~~~~~~v~~~G~lY~~~~~-----~~~i~~yD~~~~~--W~~i 298 (453)
.+|.++|. -.|+.-.. - +..... ....++.+|.+|+.... ...|.+||.++++ |+.-
T Consensus 142 alD~~tG~--~~W~~~~~~~~~~~~~~-~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 142 ALDAATGK--EVWHQNTFEGQKGSLTI-TGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEETTTCC--EEEEEETTTTCCSSCBC-CSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEECCCCC--EEeeecCCcCcCcCccc-ccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 66777765 56876422 1 110111 13457789999987642 3689999998764 7654
No 171
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=48.17 E-value=1.5e+02 Score=26.53 Aligned_cols=113 Identities=7% Similarity=0.144 Sum_probs=56.7
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee--C--CeEEEEEEEeccCCCCCCcEEEEEeecC----
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS--N--GKLILVAAVEKSKLNVPKSLRLWSLQAC---- 343 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~--~--g~L~vv~~~~~~~~~~~~~i~vw~ld~~---- 343 (453)
+|.+...+.....|..+|..++.|..+.. +..+.....-+.. + +.+++.+. .+ ..++||.+...
T Consensus 164 ~~~~l~s~s~D~~i~iW~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~l~s~s-~D------~~v~iw~~~~~~~~~ 235 (330)
T 2hes_X 164 SEALLASSSYDDTVRIWKDYDDDWECVAV-LNGHEGTVWSSDFDKTEGVFRLCSGS-DD------STVRVWKYMGDDEDD 235 (330)
T ss_dssp SSSEEEEEETTSCEEEEEEETTEEEEEEE-ECCCSSCEEEEEECCSSSSCEEEEEE-TT------SCEEEEEEEEECTTS
T ss_pred CCCEEEEEcCCCeEEEEECCCCCeeEEEE-ccCCCCcEEEEEecCCCCeeEEEEEe-CC------CeEEEEEecCCCccc
Confidence 34444444444678888888777755422 1111111111222 2 33443333 22 36899998743
Q ss_pred CCCeEEEeecCHHHHHHhhcccCCCcEEEEe--eCCEEEEEEcCCCeEEEEECCCCceEEc
Q 045071 344 GTLWAEIERMPQQLYAQFAEIEAGNGFDTIG--HGEFIVIVIRGSDKALLFDLCMKSWQWI 402 (453)
Q Consensus 344 ~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~--~g~~I~l~~~~~~~v~~Yd~~~~~W~~l 402 (453)
...|..+..++.. . ...+.++. .++ .++.....+.+.+||..+++|+.+
T Consensus 236 ~~~~~~~~~~~~~--------h-~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~ 286 (330)
T 2hes_X 236 QQEWVCEAILPDV--------H-KRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVF 286 (330)
T ss_dssp CEEEEEEEECCSC--------C-SSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEE
T ss_pred cceeEEeeecccc--------c-ccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEE
Confidence 2346655555420 0 01222222 234 334444578899999998888654
No 172
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=47.65 E-value=74 Score=31.95 Aligned_cols=107 Identities=7% Similarity=-0.035 Sum_probs=58.8
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEE-EeecCCccccCCCcee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWF-NIQAPMRRFLRSPSLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~-~i~~p~~~~~~~~~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
++.+|+.....+.|.++|..+.+-. .++... .-..++ .-+|+.+.|+. .+ . .|..+|....+-+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~----~p~~v~~SpDGr~lyv~~-~d------g--~V~viD~~~~t~~~ 232 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY----AVHISRLSASGRYLFVIG-RD------G--KVNMIDLWMKEPTT 232 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSS----CEEEEEECTTSCEEEEEE-TT------S--EEEEEETTSSSCCE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCC----CccceEECCCCCEEEEEc-CC------C--eEEEEECCCCCCcE
Confidence 5678888776689999999987643 333221 111222 23555444443 11 1 34445542112244
Q ss_pred EeecCHHHHHHhhcccCCCcEEEE----eeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTI----GHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~----~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
+.+++... ....+... ..|..+|+.++..+.+.++|..+.+-
T Consensus 233 v~~i~~G~--------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~ 278 (567)
T 1qks_A 233 VAEIKIGS--------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP 278 (567)
T ss_dssp EEEEECCS--------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE
T ss_pred eEEEecCC--------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE
Confidence 55554200 00123333 25779999887788999999877654
No 173
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=47.28 E-value=1.6e+02 Score=26.51 Aligned_cols=108 Identities=7% Similarity=-0.029 Sum_probs=57.2
Q ss_pred ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccc-cCCC-ce-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCe
Q 045071 271 VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRF-LRSP-SL-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLW 347 (453)
Q Consensus 271 ~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~-~~~~-~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W 347 (453)
-+|.+++... ..|..||+.+++.+.+....... ...+ .+ +.-+|++++... .... ......||.++ +++.
T Consensus 99 ~dg~l~v~~~--~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~-~~~~--~~~~~~l~~~~--~g~~ 171 (326)
T 2ghs_A 99 SDSKQLIASD--DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTM-GRKA--ETGAGSIYHVA--KGKV 171 (326)
T ss_dssp ETTEEEEEET--TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEE-ETTC--CTTCEEEEEEE--TTEE
T ss_pred CCCeEEEEEC--CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeC-CCcC--CCCceEEEEEe--CCcE
Confidence 4678776553 57999999999887663221110 0111 22 234788876433 2110 11235889988 3444
Q ss_pred EEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECC
Q 045071 348 AEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLC 395 (453)
Q Consensus 348 ~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~ 395 (453)
+.+.. . . .....+.....|+.+|+.....+.+.+||..
T Consensus 172 ~~~~~--~-----~---~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 172 TKLFA--D-----I---SIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEE--E-----E---SSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred EEeeC--C-----C---cccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 43321 0 0 0001222223456788876556789999975
No 174
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=47.25 E-value=1.7e+02 Score=26.80 Aligned_cols=95 Identities=13% Similarity=0.123 Sum_probs=44.8
Q ss_pred EEEEEECCCCcEEEeecCCc-cccCCCceeee---CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHH
Q 045071 284 SVLAYDISANAWFNIQAPMR-RFLRSPSLLDS---NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYA 359 (453)
Q Consensus 284 ~i~~yD~~~~~W~~i~~p~~-~~~~~~~lv~~---~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~ 359 (453)
.|..||+.+..-... ... .+.....-+.. ++++++.+... ..+.||.++. . +.+..+...
T Consensus 241 ~i~~~d~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-------g~v~~wd~~~--~--~~~~~~~~~--- 304 (416)
T 2pm9_A 241 SILIWDLRNANTPLQ--TLNQGHQKGILSLDWCHQDEHLLLSSGRD-------NTVLLWNPES--A--EQLSQFPAR--- 304 (416)
T ss_dssp CCCEEETTSTTSCSB--CCCSCCSSCEEEEEECSSCSSCEEEEESS-------SEEEEECSSS--C--CEEEEEECS---
T ss_pred eEEEEeCCCCCCCcE--EeecCccCceeEEEeCCCCCCeEEEEeCC-------CCEEEeeCCC--C--ccceeecCC---
Confidence 788999987531110 011 11111122222 56776666422 2578886653 2 233333210
Q ss_pred HhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCc
Q 045071 360 QFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 360 ~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
......+.....+..+++.....+.+.+||+.+.+
T Consensus 305 ----~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 305 ----GNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp ----SSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred ----CCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 00011222222342455554557889999998754
No 175
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=47.11 E-value=2.4e+02 Score=28.45 Aligned_cols=192 Identities=12% Similarity=0.084 Sum_probs=87.3
Q ss_pred CeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCC-cccccCCCC
Q 045071 180 AKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFS-LWGTTSSLP 258 (453)
Q Consensus 180 ~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~-~W~~~~~~p 258 (453)
...++++|..+++...+..... .......+...+++-+|++...+... ......++|..+ + ..+.+....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~----~~~~v~~~d~~~----g~~~~~~~~~~ 304 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEP-KEKFLTNLSWSPDENILYVAEVNRAQ----NECKVNAYDAET----GRFVRTLFVET 304 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSC-TTCEEEEEEECTTSSEEEEEEECTTS----CEEEEEEEETTT----CCEEEEEEEEE
T ss_pred eeEEEEEECCCCceEeeccCCC-CceeEeeEEEECCCCEEEEEEeCCCC----CeeEEEEEECCC----CceeeEEEEcc
Confidence 3578999999887665543211 11112234444544445554332111 123456667666 3 343321100
Q ss_pred CcccCC-CCCeEEE---CCEEEEEecC--CCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCC
Q 045071 259 RLCSLE-SGRMVQV---NGKFYCMNYS--PFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLN 330 (453)
Q Consensus 259 ~~~~~~-~~~~v~~---~G~lY~~~~~--~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~ 330 (453)
...... .....+. +|.+++.... ...|..+|...+....+.... .....++. -+|+.+++....+.
T Consensus 305 ~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~---~~v~~~~~~spdg~~l~~~~~~~~--- 378 (706)
T 2z3z_A 305 DKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGE---WEVTNFAGFDPKGTRLYFESTEAS--- 378 (706)
T ss_dssp CSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSS---SCEEEEEEECTTSSEEEEEESSSC---
T ss_pred CCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCC---eEEEeeeEEcCCCCEEEEEecCCC---
Confidence 000000 0112332 6775555432 246788887777666552211 01111122 24544444432221
Q ss_pred CCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC---CCeEEEEECCCCc
Q 045071 331 VPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG---SDKALLFDLCMKS 398 (453)
Q Consensus 331 ~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~---~~~v~~Yd~~~~~ 398 (453)
.....||.++..+...+.+..-. ....+.....|..|.+.... ...+.+||+++++
T Consensus 379 -~~~~~l~~~d~~~~~~~~l~~~~-----------~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 379 -PLERHFYCIDIKGGKTKDLTPES-----------GMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp -TTCBEEEEEETTCCCCEESCCSS-----------SEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred -CceEEEEEEEcCCCCceeccCCC-----------ceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 12358888887655544332110 00111222345666555332 2568889988776
No 176
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=47.01 E-value=1.5e+02 Score=26.02 Aligned_cols=107 Identities=17% Similarity=0.301 Sum_probs=54.0
Q ss_pred CEEEEEecCCCEEEEEECCCC--cEEEeecCCccccCCCceeee----CCeEEEEEEEeccCCCCCCcEEEEEeecC---
Q 045071 273 GKFYCMNYSPFSVLAYDISAN--AWFNIQAPMRRFLRSPSLLDS----NGKLILVAAVEKSKLNVPKSLRLWSLQAC--- 343 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~--~W~~i~~p~~~~~~~~~lv~~----~g~L~vv~~~~~~~~~~~~~i~vw~ld~~--- 343 (453)
|.+.+.+.....|..||+.++ .+..+.. .........-+.. ++++++.+... ..+.||.++..
T Consensus 23 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~d~~~l~s~~~d-------g~v~vwd~~~~~~~ 94 (351)
T 3f3f_A 23 GRHVATCSSDQHIKVFKLDKDTSNWELSDS-WRAHDSSIVAIDWASPEYGRIIASASYD-------KTVKLWEEDPDQEE 94 (351)
T ss_dssp SSEEEEEETTSEEEEEEECSSSCCEEEEEE-EECCSSCEEEEEECCGGGCSEEEEEETT-------SCEEEEEECTTSCT
T ss_pred CCEEEEeeCCCeEEEEECCCCCCcceecce-eccCCCcEEEEEEcCCCCCCEEEEEcCC-------CeEEEEecCCCccc
Confidence 443333333457888888754 3333211 1111111122232 37777666522 26799999864
Q ss_pred --CCCeEEEeecCHHHHHHhhcccCCCcEEEE---ee--CCEEEEEEcCCCeEEEEECCCCc
Q 045071 344 --GTLWAEIERMPQQLYAQFAEIEAGNGFDTI---GH--GEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 344 --~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~---~~--g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
...|..+..+... ...+.++ .. ++.++. ....+.+.+||+.+.+
T Consensus 95 ~~~~~~~~~~~~~~~----------~~~v~~~~~~~~~~~~~l~~-~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 95 CSGRRWNKLCTLNDS----------KGSLYSVKFAPAHLGLKLAC-LGNDGILRLYDALEPS 145 (351)
T ss_dssp TSSCSEEEEEEECCC----------SSCEEEEEECCGGGCSEEEE-EETTCEEEEEECSSTT
T ss_pred ccccCcceeeeeccc----------CCceeEEEEcCCCCCcEEEE-ecCCCcEEEecCCChH
Confidence 2356665555320 0122222 22 444544 3446889999988754
No 177
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=46.10 E-value=1.3e+02 Score=32.97 Aligned_cols=103 Identities=7% Similarity=0.120 Sum_probs=49.6
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCce-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSL-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
++.+...+ ....+..||..+++-...-........ .+ ..-+|++++++... ..+.||.++... .+
T Consensus 1055 ~~~l~~~~-~dg~v~vwd~~~~~~~~~~~~~~~~v~--~~~~s~d~~~l~s~s~d-------~~v~iwd~~~~~----~~ 1120 (1249)
T 3sfz_A 1055 DSRLLSWS-FDGTVKVWNVITGRIERDFTCHQGTVL--SCAISSDATKFSSTSAD-------KTAKIWSFDLLS----PL 1120 (1249)
T ss_dssp SSEEEEEE-SSSEEEEEETTTTCCCEEEECCSSCCC--CEEECSSSSSCEEECCS-------SCCCEECSSSSS----CS
T ss_pred CCcEEEEE-CCCcEEEEECCCCceeEEEcccCCcEE--EEEECCCCCEEEEEcCC-------CcEEEEECCCcc----ee
Confidence 34444333 346899999988754322111111011 12 22356666655422 256888766422 11
Q ss_pred eecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCce
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
..+.. -...+.++. .|..+.. ....+.+.+||+.+.+.
T Consensus 1121 ~~l~~----------h~~~v~~~~~s~dg~~lat-~~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1121 HELKG----------HNGCVRCSAFSLDGILLAT-GDDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp BCCCC----------CSSCEEEEEECSSSSEEEE-EETTSCCCEEESSSSCC
T ss_pred eeecc----------CCCcEEEEEECCCCCEEEE-EeCCCEEEEEECCCCce
Confidence 22211 001233322 3444444 44467899999987654
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=45.74 E-value=1.7e+02 Score=26.48 Aligned_cols=146 Identities=6% Similarity=-0.055 Sum_probs=68.1
Q ss_pred eeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCc
Q 045071 181 KTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRL 260 (453)
Q Consensus 181 ~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~ 260 (453)
..++++|..+++++.+.. ..+. .....+...+++-+|+.+...... ......+|+..+ +..+.+...+..
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~-~~~~~~~~spdg~~l~~~~~~~~~----~~~~l~~~d~~~----g~~~~l~~~~~~ 285 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEG-ESCTHEFWIPDGSAMAYVSYFKGQ----TDRVIYKANPET----LENEEVMVMPPC 285 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTT-EEEEEEEECTTSSCEEEEEEETTT----CCEEEEEECTTT----CCEEEEEECCSE
T ss_pred ceEEEEECCCCceeEeec-cCCC-ccccceEECCCCCEEEEEecCCCC----ccceEEEEECCC----CCeEEeeeCCCC
Confidence 468999988877766654 1111 111223444443334444322110 011246666665 444433333210
Q ss_pred ccCCCCCeEE-E-CCEEEEEec----------------CCCEEEEEECCCCcEEEeecCCccc----------cCCCcee
Q 045071 261 CSLESGRMVQ-V-NGKFYCMNY----------------SPFSVLAYDISANAWFNIQAPMRRF----------LRSPSLL 312 (453)
Q Consensus 261 ~~~~~~~~v~-~-~G~lY~~~~----------------~~~~i~~yD~~~~~W~~i~~p~~~~----------~~~~~lv 312 (453)
. ..+ - +|++++... ....|..+|+.+++...+....... ...+ ..
T Consensus 286 -----~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~ 358 (396)
T 3c5m_A 286 -----S-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHP-SF 358 (396)
T ss_dssp -----E-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCC-EE
T ss_pred -----C-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCc-eE
Confidence 1 223 2 676555422 1257899999988765553221100 1111 12
Q ss_pred eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 313 DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 313 ~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
.-+|+.+++..... ....||.++.....+++
T Consensus 359 s~dg~~l~~~s~~~------~~~~l~~~~~~~~~~~~ 389 (396)
T 3c5m_A 359 TPNDDGVLFTSDFE------GVPAIYIADVPESYKHL 389 (396)
T ss_dssp CTTSSEEEEEECTT------SSCEEEEEECCTTCC--
T ss_pred ccCCCeEEEEecCC------CCceEEEEEEccccccc
Confidence 23565444443221 23479998876666654
No 179
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=45.40 E-value=2.8e+02 Score=28.71 Aligned_cols=225 Identities=9% Similarity=0.031 Sum_probs=112.7
Q ss_pred eeeeCCCCCeEeccCC-----CCCCC-Ce-eeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCC-C---CCcceE
Q 045071 140 YLFDPHELSWYRISFA-----LVPSE-FS-PASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLR-P---RLFPSI 208 (453)
Q Consensus 140 ~~fdp~~~~w~~l~l~-----~lp~~-~~-~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~-~---r~~~~~ 208 (453)
..||+..+++..+... .++.. .. +..-..|-|.+... ..++++|+.++++..+...+. + ......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~ 313 (795)
T 4a2l_A 238 FLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF----NDLNIYHEGTDSFASYSSNPVENGSLSQRSVR 313 (795)
T ss_dssp EEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES----SCEEEEETTTTEEEEECCCTTSTTSCSSSCEE
T ss_pred EEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC----ChhheEcCCCCeEEEEecCCCCCCCCCCCcEE
Confidence 4678877776655422 12222 22 23334666666543 158889999998877643321 1 112233
Q ss_pred EEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCC--CeEEE--CCEEEEEecCCCE
Q 045071 209 GLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESG--RMVQV--NGKFYCMNYSPFS 284 (453)
Q Consensus 209 ~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~--~~v~~--~G~lY~~~~~~~~ 284 (453)
.+..|..+. +.+|... .....|+..+ +.++.....+........ .+++. +|.+++-+.. .+
T Consensus 314 ~i~~D~~g~--lWigt~~--------~Gl~~~~~~~----~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWiGt~~-~G 378 (795)
T 4a2l_A 314 SIFMDSQGG--MWLGTYF--------GGLNYYHPIR----NRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWIGTND-GG 378 (795)
T ss_dssp EEEECTTSC--EEEEESS--------SCEEEECGGG----GSSEEECCCTTSSSCSCSSEEEEEECTTSCEEEEESS-SC
T ss_pred EEEEeCCcC--EEEEECC--------CCeEEeCCCc----ccceEEcCCCCCCCCCCCeeEEEEECCCCCEEEEECC-CC
Confidence 455554322 2233221 1124555555 444433221110011111 12222 4666654433 58
Q ss_pred EEEEECCCCcEEEeecCC--cc-cc--CC-Cceee-eCCe-EEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHH
Q 045071 285 VLAYDISANAWFNIQAPM--RR-FL--RS-PSLLD-SNGK-LILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQ 356 (453)
Q Consensus 285 i~~yD~~~~~W~~i~~p~--~~-~~--~~-~~lv~-~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~ 356 (453)
|..||..++++.....+. +. .. .. ..++. .+|+ |++ |.... .|+.++..++.++........
T Consensus 379 l~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWi-gt~~~---------Gl~~~d~~~~~~~~~~~~~~~ 448 (795)
T 4a2l_A 379 LNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYI-GTHAG---------GLSILHRNSGQVENFNQRNSQ 448 (795)
T ss_dssp EEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEE-EETTT---------EEEEEETTTCCEEEECTTTSC
T ss_pred eEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEE-EeCcC---------ceeEEeCCCCcEEEeecCCCC
Confidence 999999999998764321 00 11 11 12333 4677 665 43211 577778777777665321110
Q ss_pred HHHHhhcccCCCcEEEEe--eCCEEEEEEcCCCeEEEEECCCCceEEcC
Q 045071 357 LYAQFAEIEAGNGFDTIG--HGEFIVIVIRGSDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~--~g~~I~l~~~~~~~v~~Yd~~~~~W~~l~ 403 (453)
+ ....+.++. ..+.|++... ..+..||.++++|+.+.
T Consensus 449 ----l----~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~ 487 (795)
T 4a2l_A 449 ----L----VNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFTTIE 487 (795)
T ss_dssp ----C----SCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEEECC
T ss_pred ----c----CCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEEEcc
Confidence 0 011233332 3567887654 67999999999998775
No 180
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=44.80 E-value=1.6e+02 Score=25.90 Aligned_cols=24 Identities=8% Similarity=0.192 Sum_probs=15.3
Q ss_pred CCEEEEEecCCCEEEEEECCCCcE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAW 295 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W 295 (453)
+|.+.+.+.....|..||+.+.+-
T Consensus 226 ~~~~l~s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 226 DGSLCASGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEE
T ss_pred CCCEEEEEeCCCeEEEEEeccCce
Confidence 455444444446889999987654
No 181
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=44.32 E-value=1.5e+02 Score=25.28 Aligned_cols=101 Identities=12% Similarity=0.141 Sum_probs=49.6
Q ss_pred EEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhc
Q 045071 284 SVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAE 363 (453)
Q Consensus 284 ~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~ 363 (453)
.|+.+|..+.+...+... ...... ....-+|+.+++....+ ..+.||.++........+..-..
T Consensus 154 ~l~~~~~~~~~~~~~~~~-~~~~~~-~~~s~dg~~l~~~~~~~------~~~~i~~~~~~~~~~~~~~~~~~-------- 217 (297)
T 2ojh_A 154 DIYSMDIDSGVETRLTHG-EGRNDG-PDYSPDGRWIYFNSSRT------GQMQIWRVRVDGSSVERITDSAY-------- 217 (297)
T ss_dssp EEEEEETTTCCEEECCCS-SSCEEE-EEECTTSSEEEEEECTT------SSCEEEEEETTSSCEEECCCCSE--------
T ss_pred EEEEEECCCCcceEcccC-CCcccc-ceECCCCCEEEEEecCC------CCccEEEECCCCCCcEEEecCCc--------
Confidence 566667777766554221 111111 11123566555544222 24589999865554443322110
Q ss_pred ccCCCcEEEEeeCCEEEEEEcC----------CCeEEEEECCCCceEEc
Q 045071 364 IEAGNGFDTIGHGEFIVIVIRG----------SDKALLFDLCMKSWQWI 402 (453)
Q Consensus 364 ~~~~~~~~~~~~g~~I~l~~~~----------~~~v~~Yd~~~~~W~~l 402 (453)
....+.....|+.|++.... ...+.+||+.+++...+
T Consensus 218 --~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 218 --GDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp --EEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred --ccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 00011122346666665432 14699999998876554
No 182
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=44.32 E-value=2.1e+02 Score=26.89 Aligned_cols=180 Identities=11% Similarity=0.106 Sum_probs=83.6
Q ss_pred ceeeeCCCCCeEeccCCCCCCCC-eeeeecCc-eEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCc
Q 045071 139 GYLFDPHELSWYRISFALVPSEF-SPASSSGG-LVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTA 216 (453)
Q Consensus 139 ~~~fdp~~~~w~~l~l~~lp~~~-~~~~s~~G-ll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ 216 (453)
...+|..+.+...+.. .+... .+.-+-+| .|++.....+...++++|..+++...+..... ....+...+++
T Consensus 205 i~~~d~~tg~~~~l~~--~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~----~~~~~~~spdg 278 (415)
T 2hqs_A 205 LVIQTLANGAVRQVAS--FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS----NNTEPTWFPDS 278 (415)
T ss_dssp EEEEETTTCCEEEEEC--CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS----CEEEEEECTTS
T ss_pred EEEEECCCCcEEEeec--CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC----cccceEECCCC
Confidence 3456665555443321 11112 22234455 35444433334579999999988766644321 22344555555
Q ss_pred eEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEE-ECCE-EEEEecC--CCEEEEEECCC
Q 045071 217 VDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQ-VNGK-FYCMNYS--PFSVLAYDISA 292 (453)
Q Consensus 217 ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~-~~G~-lY~~~~~--~~~i~~yD~~~ 292 (453)
-.++....... .....+++..+ +.-..+..... .. ....+ -+|. |++.... ...|..+|+.+
T Consensus 279 ~~l~~~s~~~g------~~~i~~~d~~~----~~~~~l~~~~~--~~--~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~ 344 (415)
T 2hqs_A 279 QNLAFTSDQAG------RPQVYKVNING----GAPQRITWEGS--QN--QDADVSSDGKFMVMVSSNGGQQHIAKQDLAT 344 (415)
T ss_dssp SEEEEEECTTS------SCEEEEEETTS----SCCEECCCSSS--EE--EEEEECTTSSEEEEEEECSSCEEEEEEETTT
T ss_pred CEEEEEECCCC------CcEEEEEECCC----CCEEEEecCCC--cc--cCeEECCCCCEEEEEECcCCceEEEEEECCC
Confidence 45555443211 12345556665 33222211110 00 11122 2444 4544432 25799999999
Q ss_pred CcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCe
Q 045071 293 NAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLW 347 (453)
Q Consensus 293 ~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W 347 (453)
++...+.... .... ....-+|+.++++...+. ...||.++...+..
T Consensus 345 ~~~~~l~~~~--~~~~-~~~spdg~~l~~~s~~~~------~~~l~~~d~~g~~~ 390 (415)
T 2hqs_A 345 GGVQVLSSTF--LDET-PSLAPNGTMVIYSSSQGM------GSVLNLVSTDGRFK 390 (415)
T ss_dssp CCEEECCCSS--SCEE-EEECTTSSEEEEEEEETT------EEEEEEEETTSCCE
T ss_pred CCEEEecCCC--CcCC-eEEcCCCCEEEEEEcCCC------ccEEEEEECCCCcE
Confidence 8876553221 0111 112236776666654331 23566666544433
No 183
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=42.84 E-value=1.9e+02 Score=26.19 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=49.7
Q ss_pred CEEEEEECCCCcEEEeecCCccccCCCceeee-CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHh
Q 045071 283 FSVLAYDISANAWFNIQAPMRRFLRSPSLLDS-NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQF 361 (453)
Q Consensus 283 ~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~-~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~ 361 (453)
..|..+|+.+++-..+... ......+. ..- +|+.+++...... .....+||.++........+..-...
T Consensus 168 ~~l~~~d~~~g~~~~l~~~-~~~~~~~~-~sp~dg~~l~~~~~~~~---~~~~~~l~~~d~~~~~~~~l~~~~~~----- 237 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQE-NQWLGHPI-YRPYDDSTVAFCHEGPH---DLVDARMWLINEDGTNMRKVKTHAEG----- 237 (388)
T ss_dssp EEEEEEETTTCCEEEEEEE-SSCEEEEE-EETTEEEEEEEEECSCT---TTSSCSEEEEETTSCCCEESCCCCTT-----
T ss_pred ceEEEEECCCCceEEeecC-CccccccE-ECCCCCCEEEEEEecCC---CCCcceEEEEeCCCCceEEeeeCCCC-----
Confidence 5789999998876665321 11111111 222 4555544432211 01133678777655444443221110
Q ss_pred hcccCCCcEEEEeeCCEEEEEEc-C-CC--eEEEEECCCCceEEc
Q 045071 362 AEIEAGNGFDTIGHGEFIVIVIR-G-SD--KALLFDLCMKSWQWI 402 (453)
Q Consensus 362 ~~~~~~~~~~~~~~g~~I~l~~~-~-~~--~v~~Yd~~~~~W~~l 402 (453)
. ..........|..|++... . .. .+.+||+++++.+.+
T Consensus 238 -~--~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l 279 (388)
T 3pe7_A 238 -E--SCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQL 279 (388)
T ss_dssp -E--EEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEE
T ss_pred -c--ccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEE
Confidence 0 0001111234565644332 2 22 499999998876555
No 184
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=42.81 E-value=1.8e+02 Score=25.69 Aligned_cols=20 Identities=20% Similarity=0.189 Sum_probs=12.9
Q ss_pred EEEEEcCCCeEEEEECCCCc
Q 045071 379 IVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 379 I~l~~~~~~~v~~Yd~~~~~ 398 (453)
.++.....+.+.+||+.+.+
T Consensus 200 ~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 200 YMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp EEEEEETTSEEEEEETTTTE
T ss_pred EEEEEcCCCeEEEEeCCCCc
Confidence 33444446788888887764
No 185
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=42.49 E-value=3e+02 Score=28.22 Aligned_cols=112 Identities=9% Similarity=0.071 Sum_probs=61.4
Q ss_pred ECCEEEEEecC---CCEEEEEECCC--CcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 271 VNGKFYCMNYS---PFSVLAYDISA--NAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 271 ~~G~lY~~~~~---~~~i~~yD~~~--~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
.++.||+.+.. ...|+.+|+++ .+|+.+- |..... -..+...+++|++...... ..+||.++....
T Consensus 326 dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~-~~~~~~-l~~~~~~~~~lv~~~~~dg-------~~~l~~~~~~g~ 396 (741)
T 1yr2_A 326 VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVV-PESKDN-LESVGIAGNRLFASYIHDA-------KSQVLAFDLDGK 396 (741)
T ss_dssp ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEE-CCCSSE-EEEEEEEBTEEEEEEEETT-------EEEEEEEETTSC
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEe-cCCCCe-EEEEEEECCEEEEEEEECC-------EEEEEEEeCCCC
Confidence 45678887643 35799999988 5788773 322110 0012234778776554322 347888875332
Q ss_pred CeEEEeecCHHHHHHhhcccCCCcEEEE---eeCCEEEEEEcC---CCeEEEEECCCCceEEcC
Q 045071 346 LWAEIERMPQQLYAQFAEIEAGNGFDTI---GHGEFIVIVIRG---SDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 346 ~W~~v~~mp~~~~~~~~~~~~~~~~~~~---~~g~~I~l~~~~---~~~v~~Yd~~~~~W~~l~ 403 (453)
.-.++ .+|.. ..+..+ ..++.|++...+ ...+..||+.+++.+.+.
T Consensus 397 ~~~~l-~~~~~-----------~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 397 PAGAV-SLPGI-----------GSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKTTPWE 448 (741)
T ss_dssp EEEEC-BCSSS-----------CEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEEEECS
T ss_pred ceeec-cCCCC-----------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 11111 22210 112222 235566665432 367899999998877664
No 186
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=41.98 E-value=1.9e+02 Score=26.74 Aligned_cols=103 Identities=11% Similarity=0.125 Sum_probs=51.5
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEe
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIE 351 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~ 351 (453)
+|.+.+.+.....|..||+.+++....-. ........+..++++++.+... ..+.+|.+..... .+.
T Consensus 145 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~l~~~~~d-------g~i~i~d~~~~~~---~~~ 211 (401)
T 4aez_A 145 DGSFLSVGLGNGLVDIYDVESQTKLRTMA---GHQARVGCLSWNRHVLSSGSRS-------GAIHHHDVRIANH---QIG 211 (401)
T ss_dssp TSSEEEEEETTSCEEEEETTTCCEEEEEC---CCSSCEEEEEEETTEEEEEETT-------SEEEEEETTSSSC---EEE
T ss_pred CCCEEEEECCCCeEEEEECcCCeEEEEec---CCCCceEEEEECCCEEEEEcCC-------CCEEEEecccCcc---eee
Confidence 45444444444679999998876433211 1112223345577777666422 3678887763222 122
Q ss_pred ecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 352 RMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 352 ~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
.+.. -...+.++. .++.++ .....+.+.+||+.+.+
T Consensus 212 ~~~~----------~~~~v~~~~~~~~~~~l~-s~~~d~~v~iwd~~~~~ 250 (401)
T 4aez_A 212 TLQG----------HSSEVCGLAWRSDGLQLA-SGGNDNVVQIWDARSSI 250 (401)
T ss_dssp EEEC----------CSSCEEEEEECTTSSEEE-EEETTSCEEEEETTCSS
T ss_pred EEcC----------CCCCeeEEEEcCCCCEEE-EEeCCCeEEEccCCCCC
Confidence 2211 001222222 234444 34446789999998754
No 187
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=41.23 E-value=95 Score=30.82 Aligned_cols=106 Identities=8% Similarity=0.035 Sum_probs=60.5
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEE-eecCCccccCCCcee--eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFN-IQAPMRRFLRSPSLL--DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~~~~~~~~~lv--~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
+|.+|+.......|..+|..+.+-.. +.... . +..+ .-+|+.++++... ..+.+|.++..+ -+
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~----~-~~~v~~spdg~~l~v~~~d-------~~V~v~D~~~~t--~~ 213 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY----A-VHISRMSASGRYLLVIGRD-------ARIDMIDLWAKE--PT 213 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECST----T-EEEEEECTTSCEEEEEETT-------SEEEEEETTSSS--CE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCc----c-cceEEECCCCCEEEEECCC-------CeEEEEECcCCC--Cc
Confidence 67888887766789999999876532 32211 1 2222 2356555555321 356777663222 23
Q ss_pred EEeecCHHHHHHhhcccCCCcEEEEe----eCCEEEEEEcCCCeEEEEECCCCce
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDTIG----HGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~~~----~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.+..++.. . ....+.... .|..+|+.++..+.+.+||..+.+-
T Consensus 214 ~~~~i~~g------~--~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 214 KVAEIKIG------I--EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEEEECC------S--EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred EEEEEecC------C--CcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 34444320 0 011233334 5778888876678899999987653
No 188
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=40.36 E-value=2.4e+02 Score=26.45 Aligned_cols=105 Identities=9% Similarity=0.058 Sum_probs=51.1
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCcee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
++.+.+.+.....|..+|++++....+............+. .-+|++++++... ..+.+|.++.. ++
T Consensus 176 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-------g~i~~wd~~~~-----~~ 243 (435)
T 4e54_B 176 NTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV-------GNVILLNMDGK-----EL 243 (435)
T ss_dssp CTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS-------SBEEEEESSSC-----BC
T ss_pred CCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC-------CcEeeeccCcc-----ee
Confidence 34433333333678999999887655532211111111222 2367777666421 35788976531 11
Q ss_pred eecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
..+.. . ...+.++. .++.+++.....+.+.+||+.+.+
T Consensus 244 ~~~~~---------h-~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 244 WNLRM---------H-KKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp CCSBC---------C-SSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred EEEec---------c-cceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 11110 0 01223332 344455544446778888887643
No 189
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=40.25 E-value=3e+02 Score=27.66 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=58.0
Q ss_pred CCE-EEEEecCC----CEEEEEECCCC-cEEEeecCC-ccccCC-Cce-eee--CCeEEEEEEEeccCCCCCCcEEEEEe
Q 045071 272 NGK-FYCMNYSP----FSVLAYDISAN-AWFNIQAPM-RRFLRS-PSL-LDS--NGKLILVAAVEKSKLNVPKSLRLWSL 340 (453)
Q Consensus 272 ~G~-lY~~~~~~----~~i~~yD~~~~-~W~~i~~p~-~~~~~~-~~l-v~~--~g~L~vv~~~~~~~~~~~~~i~vw~l 340 (453)
+|+ +++..... ..|..+|+.++ ....+.... ...... ..+ ..- +|++++++. .+ ..++||.+
T Consensus 268 dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~-~~------g~~~l~~~ 340 (706)
T 2z3z_A 268 DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSR-RD------GWNHLYLY 340 (706)
T ss_dssp TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEEC-TT------SSCEEEEE
T ss_pred CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEc-cC------CccEEEEE
Confidence 454 55543321 37899999998 666553211 111000 111 223 788654442 11 24589999
Q ss_pred ecCCCCeEEEeecCHHHHHHhhcccCCCc-EEEEeeCCEEEEEEcCC----CeEEEEECCCCceEEcC
Q 045071 341 QACGTLWAEIERMPQQLYAQFAEIEAGNG-FDTIGHGEFIVIVIRGS----DKALLFDLCMKSWQWIP 403 (453)
Q Consensus 341 d~~~~~W~~v~~mp~~~~~~~~~~~~~~~-~~~~~~g~~I~l~~~~~----~~v~~Yd~~~~~W~~l~ 403 (453)
+........ +... . ..... +.....|+.|++..... ..+..+|.++++.+.+.
T Consensus 341 ~~~~~~~~~---l~~~------~-~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 341 DTTGRLIRQ---VTKG------E-WEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp ETTSCEEEE---CCCS------S-SCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCEESC
T ss_pred ECCCCEEEe---cCCC------C-eEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCceecc
Confidence 854443333 3210 0 00001 11223467788776543 37888898887766664
No 190
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=39.92 E-value=2e+02 Score=25.39 Aligned_cols=111 Identities=6% Similarity=0.071 Sum_probs=0.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCe-EEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLW-AEI 350 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W-~~v 350 (453)
++.+|++......|+.+|+....++.+ |.......-.++..++..|+|...... .+.++.++.....| ...
T Consensus 38 ~~~L~aV~d~~~~I~~ld~~g~v~~~i--~l~g~~D~EGIa~~~~g~~~vs~E~~~------~l~~~~v~~~~~i~~~~~ 109 (255)
T 3qqz_A 38 SNTLFSTINKPAAIVEMTTNGDLIRTI--PLDFVKDLETIEYIGDNQFVISDERDY------AIYVISLTPNSEVKILKK 109 (255)
T ss_dssp TTEEEEEEETTEEEEEEETTCCEEEEE--ECSSCSSEEEEEECSTTEEEEEETTTT------EEEEEEECTTCCEEEEEE
T ss_pred CCEEEEEECCCCeEEEEeCCCCEEEEE--ecCCCCChHHeEEeCCCEEEEEECCCC------cEEEEEcCCCCeeeeeee
Q ss_pred eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCC-eEEEEE
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSD-KALLFD 393 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~-~v~~Yd 393 (453)
..++ ......+.+..++.....++.+|+...... .++.|+
T Consensus 110 ~~~~---~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 110 IKIP---LQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp EECC---CSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred eccc---cccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
No 191
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=39.89 E-value=1.5e+02 Score=26.76 Aligned_cols=66 Identities=11% Similarity=0.115 Sum_probs=42.1
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCce-eeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEe
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSL-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIE 351 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~ 351 (453)
+.+||.......|..||+.+++...+..+. .. ..+ ..-+|++++.. .. .|+.++..+++.+.+.
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~--~v--~~i~~~~dg~l~v~~---~~--------gl~~~d~~~g~~~~~~ 125 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKTVHALPF--MG--SALAKISDSKQLIAS---DD--------GLFLRDTATGVLTLHA 125 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEEEEECSS--CE--EEEEEEETTEEEEEE---TT--------EEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCcEEEEECCC--cc--eEEEEeCCCeEEEEE---CC--------CEEEEECCCCcEEEEe
Confidence 688998766678999999998776554331 11 122 23578887643 11 4777777667776654
Q ss_pred ec
Q 045071 352 RM 353 (453)
Q Consensus 352 ~m 353 (453)
..
T Consensus 126 ~~ 127 (326)
T 2ghs_A 126 EL 127 (326)
T ss_dssp CS
T ss_pred eC
Confidence 43
No 192
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=39.77 E-value=2e+02 Score=25.40 Aligned_cols=63 Identities=2% Similarity=-0.063 Sum_probs=32.4
Q ss_pred ECCEEEEEecCCCEEEEEECCC-Cc--EEEeecCCccccCCCceeee--CCeEEEEEEEeccCCCCCCcEEEEEeecC
Q 045071 271 VNGKFYCMNYSPFSVLAYDISA-NA--WFNIQAPMRRFLRSPSLLDS--NGKLILVAAVEKSKLNVPKSLRLWSLQAC 343 (453)
Q Consensus 271 ~~G~lY~~~~~~~~i~~yD~~~-~~--W~~i~~p~~~~~~~~~lv~~--~g~L~vv~~~~~~~~~~~~~i~vw~ld~~ 343 (453)
..+.++.. .....|..||+.+ .. ......+..... ..+.-. +|++++++... ..+.||.++..
T Consensus 159 ~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i--~~i~~~~~~~~~l~~~~~d-------g~i~i~~~~~~ 226 (342)
T 1yfq_A 159 NSSRLIVG-MNNSQVQWFRLPLCEDDNGTIEESGLKYQI--RDVALLPKEQEGYACSSID-------GRVAVEFFDDQ 226 (342)
T ss_dssp CSSEEEEE-ESTTEEEEEESSCCTTCCCEEEECSCSSCE--EEEEECSGGGCEEEEEETT-------SEEEEEECCTT
T ss_pred cCCcEEEE-eCCCeEEEEECCccccccceeeecCCCCce--eEEEECCCCCCEEEEEecC-------CcEEEEEEcCC
Confidence 33443333 3336899999988 43 322222211111 112222 56777666522 36799998865
No 193
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=39.36 E-value=1.7e+02 Score=27.17 Aligned_cols=110 Identities=10% Similarity=0.091 Sum_probs=0.0
Q ss_pred CCEEEEEecC-------------CCEEEEEECC----CCcEEEeecCCcccc-----------CCCceeeeCCeEEEEEE
Q 045071 272 NGKFYCMNYS-------------PFSVLAYDIS----ANAWFNIQAPMRRFL-----------RSPSLLDSNGKLILVAA 323 (453)
Q Consensus 272 ~G~lY~~~~~-------------~~~i~~yD~~----~~~W~~i~~p~~~~~-----------~~~~lv~~~g~L~vv~~ 323 (453)
+|.|+++... ...|++||+. ...-..+..+..... .+--.+.-+|..||.+.
T Consensus 76 ~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s 155 (334)
T 2p9w_A 76 SKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFA 155 (334)
T ss_dssp CCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEE
T ss_pred CCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCC
Q ss_pred Ee-ccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECC
Q 045071 324 VE-KSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLC 395 (453)
Q Consensus 324 ~~-~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~ 395 (453)
.. . .||+++++...=+....-.+ ......+..++.....|+.+++... .+++..+|+.
T Consensus 156 ~~~~---------~I~rV~pdG~~~~~~~~~~~----~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 156 LGMP---------AIARVSADGKTVSTFAWESG----NGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp ESSC---------EEEEECTTSCCEEEEEECCC----CSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred CCCC---------eEEEEeCCCCEEeeeeecCC----CcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
No 194
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=39.26 E-value=1.3e+02 Score=26.83 Aligned_cols=104 Identities=13% Similarity=0.098 Sum_probs=50.1
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee---CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS---NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~---~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
|.+.+.+.....|..||+.+.+-...-. .......-+.. ++++++.+... ..+.||.++. .+ .
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~l~s~~~d-------g~i~iwd~~~--~~--~ 150 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQCIKHYV---GHGNAINELKFHPRDPNLLLSVSKD-------HALRLWNIQT--DT--L 150 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCCEEEEEE---SCCSCEEEEEECSSCTTEEEEEETT-------SCEEEEETTT--TE--E
T ss_pred CCEEEEecCCCEEEEEEchhceEeeeec---CCCCcEEEEEECCCCCCEEEEEeCC-------CeEEEEEeec--Ce--E
Confidence 3444444444678899988765432211 11111122222 56776666422 2578997653 22 2
Q ss_pred EeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
+..+.. +.. ....+.++. .++.++.. ...+.+.+||+.+.+
T Consensus 151 ~~~~~~-----~~~--~~~~v~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~ 194 (366)
T 3k26_A 151 VAIFGG-----VEG--HRDEVLSADYDLLGEKIMSC-GMDHSLKLWRINSKR 194 (366)
T ss_dssp EEEECS-----TTS--CSSCEEEEEECTTSSEEEEE-ETTSCEEEEESCSHH
T ss_pred EEEecc-----ccc--ccCceeEEEECCCCCEEEEe-cCCCCEEEEECCCCc
Confidence 222210 000 011233332 34555443 346889999998754
No 195
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=39.16 E-value=2.3e+02 Score=26.01 Aligned_cols=104 Identities=13% Similarity=0.055 Sum_probs=49.4
Q ss_pred EEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee--CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEee
Q 045071 275 FYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS--NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIER 352 (453)
Q Consensus 275 lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~--~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~ 352 (453)
+.+.+.....|..||+.+++....- ....+.....-+.. +|++++++... ..+.||.++. . +.+..
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~iwd~~~--~--~~~~~ 213 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTL-GPDVHPDTIYSVDWSRDGALICTSCRD-------KRVRVIEPRK--G--TVVAE 213 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEE-CTTTCCSCEEEEEECTTSSCEEEEETT-------SEEEEEETTT--T--EEEEE
T ss_pred EEEEEcCCCEEEEEECCCCCccEEE-ecCCCCCceEEEEECCCCCEEEEEecC-------CcEEEEeCCC--C--ceeee
Confidence 4444444467999999988654331 10111111122222 57766665421 2578886653 2 22323
Q ss_pred c-CHHHHHHhhcccCCCcEE-EEeeCCEEEEEE---cCCCeEEEEECCCCc
Q 045071 353 M-PQQLYAQFAEIEAGNGFD-TIGHGEFIVIVI---RGSDKALLFDLCMKS 398 (453)
Q Consensus 353 m-p~~~~~~~~~~~~~~~~~-~~~~g~~I~l~~---~~~~~v~~Yd~~~~~ 398 (453)
+ ... ....... +...++.+++.+ ...+.+.+||+.+.+
T Consensus 214 ~~~~~--------~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 214 KDRPH--------EGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE 256 (402)
T ss_dssp EECSS--------CSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS
T ss_pred eccCC--------CCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc
Confidence 2 110 0000111 122244555544 346788889887643
No 196
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=38.57 E-value=2.4e+02 Score=26.09 Aligned_cols=116 Identities=14% Similarity=0.146 Sum_probs=64.2
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecC--Ccc-----------ccCC---Cceeee---CCeEEEEEEEeccCCCCC
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAP--MRR-----------FLRS---PSLLDS---NGKLILVAAVEKSKLNVP 332 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p--~~~-----------~~~~---~~lv~~---~g~L~vv~~~~~~~~~~~ 332 (453)
.+.+|+.+.. ..|+..+-....|+.+... .|. .... ..|+.. .+.|++... ..
T Consensus 128 ~~~l~~g~~~-ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~g------ 199 (394)
T 3b7f_A 128 PGTWYAGTSP-QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SG------ 199 (394)
T ss_dssp TTCEEEEEET-TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TB------
T ss_pred CCEEEEEecC-CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CC------
Confidence 5788887654 5788888888899887421 010 0001 123222 366776432 11
Q ss_pred CcEEEEEeecCCCCeEEEeecCHHHHHHhhcc---cCCCcEEEEe----eCCEEEEEEcCCCeEEEEECCCCceEEcC
Q 045071 333 KSLRLWSLQACGTLWAEIERMPQQLYAQFAEI---EAGNGFDTIG----HGEFIVIVIRGSDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 333 ~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~---~~~~~~~~~~----~g~~I~l~~~~~~~v~~Yd~~~~~W~~l~ 403 (453)
.||+.+.....|+.+..-... .+... .....+.++. ..+.||+.. ...++.++...++|+.+.
T Consensus 200 ---gl~~s~DgG~tW~~~~~~~~~---~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~tW~~~~ 269 (394)
T 3b7f_A 200 ---GVFESTDAGTDWKPLNRGCAA---NFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREGVWKRIG 269 (394)
T ss_dssp ---EEEEESSTTSSCEECCTTCCC---TTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTTEEECGG
T ss_pred ---CEEEECCCCCCceECCCCccc---cccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCCcceECC
Confidence 588888878899886431110 00000 0001122222 136788754 356888888889998874
No 197
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=37.39 E-value=1.7e+02 Score=26.32 Aligned_cols=106 Identities=9% Similarity=0.101 Sum_probs=50.7
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
|.+.+.+.....|..+|..+.+-... .+.. ......+. -+|++++.++.. ..+.||.++.........
T Consensus 67 ~~~l~s~s~Dg~v~iWd~~~~~~~~~-~~~~--~~~v~~~~~s~~~~~l~s~~~d-------~~v~iw~~~~~~~~~~~~ 136 (340)
T 1got_B 67 SRLLLSASQDGKLIIWDSYTTNKVHA-IPLR--SSWVMTCAYAPSGNYVACGGLD-------NICSIYNLKTREGNVRVS 136 (340)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEE-EECS--SSCEEEEEECTTSSEEEEEETT-------CEEEEEETTTCSBSCEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCCcceE-eecC--CccEEEEEECCCCCEEEEEeCC-------CeEEEEECccCCCcceeE
Confidence 33333333346788888887654222 1111 11111122 356766666422 357899876543333333
Q ss_pred eecCHHHHHHhhcccCCCcEEEE--eeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 351 ERMPQQLYAQFAEIEAGNGFDTI--GHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~~~--~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
..+... ...+.++ ..++.++ .....+.+.+||+.+.+-
T Consensus 137 ~~~~~h----------~~~v~~~~~~~~~~l~-s~s~d~~i~~wd~~~~~~ 176 (340)
T 1got_B 137 RELAGH----------TGYLSCCRFLDDNQIV-TSSGDTTCALWDIETGQQ 176 (340)
T ss_dssp EEEECC----------SSCEEEEEEEETTEEE-EEETTSCEEEEETTTTEE
T ss_pred EEecCC----------CccEEEEEECCCCcEE-EEECCCcEEEEECCCCcE
Confidence 232210 0122222 2345543 334467888899887653
No 198
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=37.14 E-value=1.7e+02 Score=28.80 Aligned_cols=108 Identities=9% Similarity=0.055 Sum_probs=61.6
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCcc-ccCCCceee---------eCCe-EEEEEEEeccCCCCCCcEEEEEee
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRR-FLRSPSLLD---------SNGK-LILVAAVEKSKLNVPKSLRLWSLQ 341 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~-~~~~~~lv~---------~~g~-L~vv~~~~~~~~~~~~~i~vw~ld 341 (453)
+.||+.......|..+|++++..+.+. +... ....+.-++ .+|+ ||+....... ......|+.++
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~~l~-~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~---~~~~~~V~~i~ 227 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLSSPL-NINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK---GDESPSVYIIK 227 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEEEEE-CCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT---GGGEEEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCEEEEEE-ccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC---cccCceEEEEe
Confidence 779988765567999999999887762 2211 112233222 3565 7765543211 01133577775
Q ss_pred cCC-CCeE------EEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECC
Q 045071 342 ACG-TLWA------EIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLC 395 (453)
Q Consensus 342 ~~~-~~W~------~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~ 395 (453)
... +.|. .+..+.. ...+..-..++.||+.....+.+..||++
T Consensus 228 r~~~G~~~~~~~~~~v~~~~~-----------p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 228 RNADGTFDDRSDIQLIAAYKQ-----------CNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp CCTTSCCSTTSCEEEEEEESC-----------CCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cCCCCceeecccceeeccCCC-----------ceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 432 4553 3332211 12333333467899988878889999997
No 199
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=37.01 E-value=2e+02 Score=28.31 Aligned_cols=113 Identities=9% Similarity=-0.067 Sum_probs=60.7
Q ss_pred EEECC-EEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCe
Q 045071 269 VQVNG-KFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLW 347 (453)
Q Consensus 269 v~~~G-~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W 347 (453)
+..+| .+++.......+..||+++++...+... +. ......-+|+.++.+..... ....||.+|..++++
T Consensus 117 ~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~-~~---~~~~~spDG~~la~~~~~~~-----~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 117 GVDTGEAVVFTGATEDRVALYALDGGGLRELARL-PG---FGFVSDIRGDLIAGLGFFGG-----GRVSLFTSNLSSGGL 187 (582)
T ss_dssp EEECSSCEEEEEECSSCEEEEEEETTEEEEEEEE-SS---CEEEEEEETTEEEEEEEEET-----TEEEEEEEETTTCCC
T ss_pred eCCCCCeEEEEecCCCCceEEEccCCcEEEeecC-CC---ceEEECCCCCEEEEEEEcCC-----CCeEEEEEcCCCCCc
Confidence 34455 3455544445566889998877665321 11 11223456777665543321 123577777666777
Q ss_pred EEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCC--eEEEEECCCCceEE
Q 045071 348 AEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSD--KALLFDLCMKSWQW 401 (453)
Q Consensus 348 ~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~--~v~~Yd~~~~~W~~ 401 (453)
+.+..-+.. .........|..|+. ....+ .+.+||+++++.+.
T Consensus 188 ~~l~~~~~~----------~~~~~~SpDG~~l~~-~~~~~~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 188 RVFDSGEGS----------FSSASISPGMKVTAG-LETAREARLVTVDPRDGSVED 232 (582)
T ss_dssp EEECCSSCE----------EEEEEECTTSCEEEE-EECSSCEEEEEECTTTCCEEE
T ss_pred eEeecCCCc----------cccceECCCCCEEEE-ccCCCeeEEEEEcCCCCcEEE
Confidence 655332110 011222335667773 33333 89999999888763
No 200
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=36.71 E-value=2.3e+02 Score=25.16 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=0.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee--CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS--NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~--~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+|.+.+.+.....|..||..+...... .....+.....-+.. +|++++++.... .+.||.++ +.+-..
T Consensus 53 ~g~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~s~~~dg-------~v~iwd~~--~~~~~~ 122 (368)
T 3mmy_A 53 PGNFLIAGSWANDVRCWEVQDSGQTIP-KAQQMHTGPVLDVCWSDDGSKVFTASCDK-------TAKMWDLS--SNQAIQ 122 (368)
T ss_dssp SSEEEEEEETTSEEEEEEECTTSCEEE-EEEEECSSCEEEEEECTTSSEEEEEETTS-------EEEEEETT--TTEEEE
T ss_pred CceEEEEECCCCcEEEEEcCCCCceeE-EEeccccCCEEEEEECcCCCEEEEEcCCC-------cEEEEEcC--CCCcee
Q ss_pred EeecCHHHHHHhhcccCCCcEEEEee----CCEEEEEEcCCCeEEEEECCCCc
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTIGH----GEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~~~----g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
...... .+.++.. ++..++.....+.+.+||+.+.+
T Consensus 123 ~~~~~~-------------~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 123 IAQHDA-------------PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEECSS-------------CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred eccccC-------------ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
No 201
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=36.37 E-value=1.9e+02 Score=27.62 Aligned_cols=110 Identities=6% Similarity=0.027 Sum_probs=60.1
Q ss_pred eEEEC-----CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ce-eeeCCeEEEEEEEeccCCCCCCcEEEEEe
Q 045071 268 MVQVN-----GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SL-LDSNGKLILVAAVEKSKLNVPKSLRLWSL 340 (453)
Q Consensus 268 ~v~~~-----G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~l 340 (453)
.+.++ |.||+.... ..|..+|+.+++...+.... ..+ .+ +.-+|+||+...... ...-.++.+
T Consensus 143 gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~----~~P~giavd~dG~lyVad~~~~-----~~~~gv~~~ 212 (433)
T 4hw6_A 143 RMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNI----GQCADVNFTLNGDMVVVDDQSS-----DTNTGIYLF 212 (433)
T ss_dssp EEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCC----SCEEEEEECTTCCEEEEECCSC-----TTSEEEEEE
T ss_pred eEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCC----CCccEEEECCCCCEEEEcCCCC-----cccceEEEE
Confidence 45555 899998776 78999999988887663321 222 23 235677887653211 011234445
Q ss_pred ecCCCCeE---EEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 341 QACGTLWA---EIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 341 d~~~~~W~---~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
+.. ..|. .+..+.. ...+.+...++.||+.....+++..||+.+.+.
T Consensus 213 ~~~-~~~~~~~~~~~~~~-----------P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 213 TRA-SGFTERLSLCNARG-----------AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CGG-GTTCCEEEEEECSS-----------BCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred ECC-CCeeccccccccCC-----------CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 442 2232 1221110 012222223567887765567788888876554
No 202
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=36.35 E-value=3.5e+02 Score=27.32 Aligned_cols=117 Identities=14% Similarity=0.105 Sum_probs=61.2
Q ss_pred EEECCEEEEEec---CCCEEEEEECCCCc---EEEeecCCccc-cCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEee
Q 045071 269 VQVNGKFYCMNY---SPFSVLAYDISANA---WFNIQAPMRRF-LRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQ 341 (453)
Q Consensus 269 v~~~G~lY~~~~---~~~~i~~yD~~~~~---W~~i~~p~~~~-~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld 341 (453)
+..+|.+|+.+. ....|..+|+++.+ |+.+-.+.+.. .. .+...+++|++...... ..+||.++
T Consensus 278 ~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~--~~~~~~~~lv~~~~~dg-------~~~l~~~~ 348 (695)
T 2bkl_A 278 HAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLL--SVSIVGGHLSLEYLKDA-------TSEVRVAT 348 (695)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE--EEEEETTEEEEEEEETT-------EEEEEEEE
T ss_pred EecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEE--EEEEECCEEEEEEEECC-------EEEEEEEe
Confidence 445666777664 23689999998754 87763332111 11 12234788877654322 35788888
Q ss_pred cCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcC---CCeEEEEECCCCceEEcC
Q 045071 342 ACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRG---SDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 342 ~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~---~~~v~~Yd~~~~~W~~l~ 403 (453)
.....-.++ .++.. .....+.....++.+++...+ ...+..||+.+++.+.+.
T Consensus 349 ~~g~~~~~l-~~~~~--------~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 349 LKGKPVRTV-QLPGV--------GAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp TTCCEEEEC-CCSSS--------SEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCEEEEE
T ss_pred CCCCeeEEe-cCCCC--------eEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcEEEEe
Confidence 533211111 12210 000011111235667665432 357889999888766553
No 203
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=36.17 E-value=2.6e+02 Score=25.64 Aligned_cols=72 Identities=7% Similarity=0.159 Sum_probs=43.5
Q ss_pred EEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceEEcCCCCCcCCCCCCC
Q 045071 336 RLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQWIPRCPYVQANNCGG 415 (453)
Q Consensus 336 ~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~l~~~p~~~~~~~~~ 415 (453)
.||.+|.. ..+.+.+++..- ...+.....|.++|..+. +.+.+||.++.+.+.+..+.-.
T Consensus 287 ~v~viD~~--t~~~v~~i~~~~---------p~~ia~spdg~~l~v~n~--~~v~v~D~~t~~l~~~~~i~~~------- 346 (361)
T 2oiz_A 287 EIWVMDTK--TKQRVARIPGRD---------ALSMTIDQQRNLMLTLDG--GNVNVYDISQPEPKLLRTIEGA------- 346 (361)
T ss_dssp EEEEEETT--TTEEEEEEECTT---------CCEEEEETTTTEEEEECS--SCEEEEECSSSSCEEEEEETTS-------
T ss_pred eEEEEECC--CCcEEEEEecCC---------eeEEEECCCCCEEEEeCC--CeEEEEECCCCcceeeEEeccC-------
Confidence 67777753 345666665310 124444556788888764 8999999998744555443211
Q ss_pred CCCCCCceeEEEEeccc
Q 045071 416 NYGDGEGELHGFAYEPR 432 (453)
Q Consensus 416 ~~~~~~~~~~~~~f~P~ 432 (453)
+....++++.|.
T Consensus 347 -----G~~P~~~~~~p~ 358 (361)
T 2oiz_A 347 -----AEASLQVQFHPV 358 (361)
T ss_dssp -----CSSEEEEEECCC
T ss_pred -----CCCcEEEEecCC
Confidence 124667888773
No 204
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=35.62 E-value=95 Score=27.70 Aligned_cols=27 Identities=7% Similarity=-0.125 Sum_probs=20.7
Q ss_pred eeCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 374 GHGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 374 ~~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
..|+.+|+.....+.+.+||+.+.+..
T Consensus 52 ~dg~~~~v~~~~~~~i~~~d~~t~~~~ 78 (349)
T 1jmx_B 52 PDNRTAYVLNNHYGDIYGIDLDTCKNT 78 (349)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCEEEEEeCCCCcEEEEeCCCCcEE
Confidence 356678887766788999999987654
No 205
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.56 E-value=3.6e+02 Score=27.12 Aligned_cols=119 Identities=13% Similarity=0.094 Sum_probs=60.8
Q ss_pred cCceEEEEecCCCCeeEEEEcC-cccc--eecCCCCCC-----CCCc-ceEEEEE--cCC--ceEEEEEccCCCCccccc
Q 045071 167 SGGLVCWVSDHAGAKTLILCNP-VTGS--LSQLPPTLR-----PRLF-PSIGLKV--TPT--AVDVTVAGDDLISPYAVK 233 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP-~T~~--w~~LP~~~~-----~r~~-~~~~~~~--~~~--~ykvv~~g~~~~~~~~~~ 233 (453)
.+|.|++.... ...++.+|+ .|++ |+.-+.... ..+. ..-++.+ ... .-+||+...+
T Consensus 61 ~~g~vyv~~~~--~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d-------- 130 (599)
T 1w6s_A 61 VDGKMYIHTSF--PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD-------- 130 (599)
T ss_dssp ETTEEEEECST--TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT--------
T ss_pred ECCEEEEEeCC--CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC--------
Confidence 47777776531 125778888 7775 665443221 0000 0012223 111 1226664332
Q ss_pred ccceeEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEec-----CCCEEEEEECCCCc--EEEe
Q 045071 234 NLSSESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNY-----SPFSVLAYDISANA--WFNI 298 (453)
Q Consensus 234 ~~~~evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~-----~~~~i~~yD~~~~~--W~~i 298 (453)
-....+|.++|. -.|+.-..-+..........++.+|++|+-.. ....|.+||.++++ |+.-
T Consensus 131 -g~l~AlDa~TG~--~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 131 -GNVAALNAETGE--TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp -SEEEEEETTTCC--EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred -CEEEEEECCCCC--EEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 123556776765 56875321110000111345778999998653 23689999999764 7654
No 206
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=34.47 E-value=2.7e+02 Score=25.45 Aligned_cols=104 Identities=13% Similarity=0.040 Sum_probs=51.7
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCe-EEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGK-LILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
+|.+.+.+.....|..||+.+.+-... .+.. ......-+. -+|+ +++++. .+ ..+.||.+......-.
T Consensus 258 ~~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~-~~~~v~~~~~~~~~~~~l~~g~-~d------g~i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 258 YGKYVIAGHVSGVITVHNVFSKEQTIQ-LPSK-FTCSCNSLTVDGNNANYIYAGY-EN------GMLAQWDLRSPECPVG 328 (420)
T ss_dssp TTEEEEEEETTSCEEEEETTTCCEEEE-ECCT-TSSCEEEEEECSSCTTEEEEEE-TT------SEEEEEETTCTTSCSE
T ss_pred CCCEEEEEcCCCeEEEEECCCCceeEE-cccc-cCCCceeEEEeCCCCCEEEEEe-CC------CeEEEEEcCCCcCchh
Confidence 455445555446799999988754222 1111 111111222 2455 665554 22 2678897764322122
Q ss_pred EEeecCHHHHHHhhcccCCCcEEE-EeeCCEEEEEEcCCCeEEEEECCC
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDT-IGHGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~-~~~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
.+..-.. ..+.+ ....+.+++.....+.+.+||+.+
T Consensus 329 ~~~~~~~------------~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 329 EFLINEG------------TPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEESTT------------SCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred hhhccCC------------CCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 2211110 12222 223455666655578899999876
No 207
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=33.15 E-value=2.5e+02 Score=24.56 Aligned_cols=25 Identities=16% Similarity=0.189 Sum_probs=18.4
Q ss_pred CC-EEEEEecCCCEEEEEECCCCcEE
Q 045071 272 NG-KFYCMNYSPFSVLAYDISANAWF 296 (453)
Q Consensus 272 ~G-~lY~~~~~~~~i~~yD~~~~~W~ 296 (453)
+| .+|+.......|..+|+.+.+-.
T Consensus 44 dg~~l~v~~~~~~~v~~~d~~~~~~~ 69 (337)
T 1pby_B 44 GGRIAYATVNKSESLVKIDLVTGETL 69 (337)
T ss_dssp TSSEEEEEETTTTEEEEEETTTCCEE
T ss_pred CCCEEEEEeCCCCeEEEEECCCCCeE
Confidence 45 57777665578999999887653
No 208
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=32.75 E-value=3.1e+02 Score=25.51 Aligned_cols=69 Identities=9% Similarity=0.134 Sum_probs=37.0
Q ss_pred CCEEEEEECCC--CcEEEeecC---C-ccccCCCceee-e--CC--eEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 282 PFSVLAYDISA--NAWFNIQAP---M-RRFLRSPSLLD-S--NG--KLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 282 ~~~i~~yD~~~--~~W~~i~~p---~-~~~~~~~~lv~-~--~g--~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
...|+.||+++ .+-.++... + .....-..+-. . +| +||+|.... ....++||+++.+....+.+
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~-----~~s~ielf~~d~~~~~~~~~ 156 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPG-----SSSTVEVFKFQEEEKSLLHL 156 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECST-----TCCEEEEEEEETTTTEEEEE
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCC-----CCCeEEEEEEECCCCEEEEE
Confidence 35788888873 344444221 1 11112122221 1 34 577766521 13578999999876666666
Q ss_pred eecCH
Q 045071 351 ERMPQ 355 (453)
Q Consensus 351 ~~mp~ 355 (453)
.+...
T Consensus 157 ~~~~g 161 (355)
T 3sre_A 157 KTIRH 161 (355)
T ss_dssp EEECC
T ss_pred ecccc
Confidence 66543
No 209
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=31.16 E-value=5.4e+02 Score=27.94 Aligned_cols=144 Identities=13% Similarity=0.123 Sum_probs=67.2
Q ss_pred ecCceEEEEecCCCCeeEEEEcCccccee-cCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLS-QLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA 244 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~-~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~ 244 (453)
+.+|-+++.+... ..+.+||..+++.. .+.. ......++.+.+++-.++..+.+ ..+.+||..+
T Consensus 624 s~~~~~l~s~~~d--~~i~vw~~~~~~~~~~~~~----h~~~v~~~~~s~~~~~l~s~~~d---------~~v~vwd~~~ 688 (1249)
T 3sfz_A 624 SQDGQRIASCGAD--KTLQVFKAETGEKLLDIKA----HEDEVLCCAFSSDDSYIATCSAD---------KKVKIWDSAT 688 (1249)
T ss_dssp CTTSSEEEEEETT--SCEEEEETTTCCEEEEECC----CSSCEEEEEECTTSSEEEEEETT---------SEEEEEETTT
T ss_pred CCCCCEEEEEeCC--CeEEEEECCCCCEEEEecc----CCCCEEEEEEecCCCEEEEEeCC---------CeEEEEECCC
Confidence 4455555554432 37889999887642 2221 11233455555544344443332 2457888776
Q ss_pred CCCCCcccc-cCCCCCcccCCCCCeEEE---CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCcee--eeCCeE
Q 045071 245 GGFFSLWGT-TSSLPRLCSLESGRMVQV---NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLL--DSNGKL 318 (453)
Q Consensus 245 ~~~~~~W~~-~~~~p~~~~~~~~~~v~~---~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv--~~~g~L 318 (453)
+.-.. ...... .. ....+. ++.+.+.+.....|..||..+++-..... .+.....-+ .-+|++
T Consensus 689 ----~~~~~~~~~~~~--~v--~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~---~h~~~v~~~~~sp~~~~ 757 (1249)
T 3sfz_A 689 ----GKLVHTYDEHSE--QV--NCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF---GHTNSVNHCRFSPDDEL 757 (1249)
T ss_dssp ----CCEEEEEECCSS--CE--EEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC---CCSSCEEEEEECSSTTE
T ss_pred ----CceEEEEcCCCC--cE--EEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec---CCCCCEEEEEEecCCCE
Confidence 32211 110000 00 011221 22333334444679999999876533211 111111112 235666
Q ss_pred EEEEEEeccCCCCCCcEEEEEeec
Q 045071 319 ILVAAVEKSKLNVPKSLRLWSLQA 342 (453)
Q Consensus 319 ~vv~~~~~~~~~~~~~i~vw~ld~ 342 (453)
++++... ..+.+|.+..
T Consensus 758 l~s~s~d-------g~v~vwd~~~ 774 (1249)
T 3sfz_A 758 LASCSAD-------GTLRLWDVRS 774 (1249)
T ss_dssp EEEEESS-------SEEEEEEGGG
T ss_pred EEEEECC-------CeEEEEeCCC
Confidence 6655422 2678998764
No 210
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=30.97 E-value=3e+02 Score=24.87 Aligned_cols=93 Identities=11% Similarity=0.199 Sum_probs=45.7
Q ss_pred CCCEEEEEECCCCcEEEeecCCccccCCCceeee----CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHH
Q 045071 281 SPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS----NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQ 356 (453)
Q Consensus 281 ~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~----~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~ 356 (453)
....|..+|+.+++-...-. .+......+.. +|++++.+... ..+.+|.+.. ..... .+..
T Consensus 174 ~D~~v~lwd~~~~~~~~~~~---~h~~~v~~~~~~~~~~g~~l~sgs~D-------g~v~~wd~~~--~~~~~--~~~~- 238 (354)
T 2pbi_B 174 GDGTCALWDVESGQLLQSFH---GHGADVLCLDLAPSETGNTFVSGGCD-------KKAMVWDMRS--GQCVQ--AFET- 238 (354)
T ss_dssp TTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECCCSSCCEEEEEETT-------SCEEEEETTT--CCEEE--EECC-
T ss_pred CCCcEEEEeCCCCeEEEEEc---CCCCCeEEEEEEeCCCCCEEEEEeCC-------CeEEEEECCC--CcEEE--EecC-
Confidence 33688999999876533211 11111111221 45666655422 2578997653 33322 2211
Q ss_pred HHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 357 LYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
. ...+.++. .++.++ .....+.+.+||+.+.+
T Consensus 239 --------h-~~~v~~v~~~p~~~~l~-s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 239 --------H-ESDVNSVRYYPSGDAFA-SGSDDATCRLYDLRADR 273 (354)
T ss_dssp --------C-SSCEEEEEECTTSSEEE-EEETTSCEEEEETTTTE
T ss_pred --------C-CCCeEEEEEeCCCCEEE-EEeCCCeEEEEECCCCc
Confidence 0 01233332 344443 33446788899987764
No 211
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=30.57 E-value=3.4e+02 Score=27.84 Aligned_cols=105 Identities=10% Similarity=0.037 Sum_probs=0.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCcc--ccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRR--FLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~--~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+|.+++......+|..||+.+++++.+...... .....-+...+|.|++ +... .+.++++.++.++.
T Consensus 482 ~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWi--gt~~---------Gl~~~~~~~~~~~~ 550 (758)
T 3ott_A 482 EGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWV--GFHG---------GVMRINPKDESQQS 550 (758)
T ss_dssp TSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEE--EETT---------EEEEECC--CCCCB
T ss_pred CCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEE--EecC---------ceEEEecCCCceEE
Q ss_pred E--eecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCceE
Q 045071 350 I--ERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSWQ 400 (453)
Q Consensus 350 v--~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~ 400 (453)
. ..+|. .....+....+.|++... ..+..||+++.+.+
T Consensus 551 ~~~~gl~~-----------~~i~~i~~~~g~lWi~t~--~Gl~~~~~~~~~~~ 590 (758)
T 3ott_A 551 ISFGSFSN-----------NEILSMTCVKNSIWVSTT--NGLWIIDRKTMDAR 590 (758)
T ss_dssp CCCCC--------------CCEEEEEEETTEEEEEES--SCEEEEETTTCCEE
T ss_pred ecccCCCc-----------cceEEEEECCCCEEEECC--CCeEEEcCCCceeE
No 212
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=30.37 E-value=3.3e+02 Score=25.15 Aligned_cols=102 Identities=9% Similarity=0.110 Sum_probs=52.2
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEE-eecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFN-IQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~-i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+.+.+.+.....|..||+.+.+-.. +..+. ......-+. -+|++++++... ..+.||.+.. . +.
T Consensus 182 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--h~~~v~~~~~s~~~~~l~s~~~d-------g~i~iwd~~~--~--~~ 248 (437)
T 3gre_A 182 KSLLVALTNLSRVIIFDIRTLERLQIIENSP--RHGAVSSICIDEECCVLILGTTR-------GIIDIWDIRF--N--VL 248 (437)
T ss_dssp CEEEEEEETTSEEEEEETTTCCEEEEEECCG--GGCCEEEEEECTTSCEEEEEETT-------SCEEEEETTT--T--EE
T ss_pred CCEEEEEeCCCeEEEEeCCCCeeeEEEccCC--CCCceEEEEECCCCCEEEEEcCC-------CeEEEEEcCC--c--cE
Confidence 5544445555789999998865432 22221 111112222 257777666422 2578997663 2 22
Q ss_pred Eeec--CHHHHHHhhcccCCCcEEEE----e--eCCEEEEEEcCCCeEEEEECCCCc
Q 045071 350 IERM--PQQLYAQFAEIEAGNGFDTI----G--HGEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 350 v~~m--p~~~~~~~~~~~~~~~~~~~----~--~g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
+..+ +. ...+.++ . .++.+++.....+.+.+||+.+.+
T Consensus 249 ~~~~~~~~-----------~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 249 IRSWSFGD-----------HAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGH 294 (437)
T ss_dssp EEEEBCTT-----------CEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTE
T ss_pred EEEEecCC-----------CCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCc
Confidence 3322 21 1122222 1 123344444456789999998765
No 213
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=30.18 E-value=3.3e+02 Score=25.17 Aligned_cols=60 Identities=12% Similarity=0.264 Sum_probs=31.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEee
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQ 341 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld 341 (453)
+|...+.+.....|..||+.++.-...-. .+......+. -+|++++.+.. + ..++||.+.
T Consensus 203 ~~~~l~s~s~D~~i~~wd~~~~~~~~~~~---~h~~~v~~~~~~~~g~~l~s~s~-D------~~v~vwd~~ 264 (410)
T 1vyh_C 203 NGDHIVSASRDKTIKMWEVQTGYCVKTFT---GHREWVRMVRPNQDGTLIASCSN-D------QTVRVWVVA 264 (410)
T ss_dssp SSSEEEEEETTSEEEEEETTTCCEEEEEE---CCSSCEEEEEECTTSSEEEEEET-T------SCEEEEETT
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEEe---CCCccEEEEEECCCCCEEEEEcC-C------CeEEEEECC
Confidence 34433444444789999998875422211 1111112222 35777665542 2 257889765
No 214
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=29.86 E-value=2.7e+02 Score=23.96 Aligned_cols=22 Identities=14% Similarity=0.095 Sum_probs=14.7
Q ss_pred CCEEEEEEcCCCeEEEEECCCCc
Q 045071 376 GEFIVIVIRGSDKALLFDLCMKS 398 (453)
Q Consensus 376 g~~I~l~~~~~~~v~~Yd~~~~~ 398 (453)
++. ++.....+.+.+||+.+.+
T Consensus 195 ~~~-~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 195 DGH-FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp TTE-EEEEETTSEEEEEETTTCC
T ss_pred CCe-EEEccCCCeEEEEECCchh
Confidence 445 4444456789999998764
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=29.76 E-value=2.5e+02 Score=27.26 Aligned_cols=118 Identities=11% Similarity=0.157 Sum_probs=59.5
Q ss_pred CCEEEEEECCCCcEE-EeecCCcccc-CCCce-eee-CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEee--cCH
Q 045071 282 PFSVLAYDISANAWF-NIQAPMRRFL-RSPSL-LDS-NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIER--MPQ 355 (453)
Q Consensus 282 ~~~i~~yD~~~~~W~-~i~~p~~~~~-~~~~l-v~~-~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~--mp~ 355 (453)
.+.|.+||..+.+-. .+........ ....+ ..- +..+|+++.+.... ....+.+|.++. ++|+.+.. ++.
T Consensus 227 ~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~--Lss~V~v~~~d~--g~~~~~~vIdi~~ 302 (462)
T 2ece_A 227 GNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKD--LSSSIWLWFYED--GKWNAEKVIEIPA 302 (462)
T ss_dssp CCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTT--CCEEEEEEEEET--TEEEEEEEEEECC
T ss_pred CCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccC--CCceEEEEEecC--CceeEEEEEeCCC
Confidence 478999999986432 2333211000 00011 122 34566655422111 123566777764 67875433 232
Q ss_pred H--------HHHHhhcc-cCCCcEEEEeeCCEEEEEEcCCCeEEEEECC-CCceEEcC
Q 045071 356 Q--------LYAQFAEI-EAGNGFDTIGHGEFIVIVIRGSDKALLFDLC-MKSWQWIP 403 (453)
Q Consensus 356 ~--------~~~~~~~~-~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~-~~~W~~l~ 403 (453)
. +-..|... .....+.....|.++|+.+...+.|.+||+. ..+.+.+.
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~ 360 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTG 360 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE
Confidence 1 00111111 1123344455688999999888999999986 33444443
No 216
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=29.65 E-value=86 Score=29.63 Aligned_cols=101 Identities=14% Similarity=0.221 Sum_probs=50.2
Q ss_pred CCEEEEEecCCCEEEEEECCCCc----EEEeecCCccccCCCceeee--CCe-EEEEEEEeccCCCCCCcEEEEEeecCC
Q 045071 272 NGKFYCMNYSPFSVLAYDISANA----WFNIQAPMRRFLRSPSLLDS--NGK-LILVAAVEKSKLNVPKSLRLWSLQACG 344 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~----W~~i~~p~~~~~~~~~lv~~--~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~ 344 (453)
++.+++.+.....|..||+.+.. ...+.. .......+.. +++ +++++... ..+.||.+....
T Consensus 243 ~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~----~~~~v~~i~~~p~~~~~l~tg~~d-------g~v~vwd~~~~~ 311 (430)
T 2xyi_A 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA----HTAEVNCLSFNPYSEFILATGSAD-------KTVALWDLRNLK 311 (430)
T ss_dssp CTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC----CSSCEEEEEECSSCTTEEEEEETT-------SEEEEEETTCTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCCCcceeEeec----CCCCeEEEEeCCCCCCEEEEEeCC-------CeEEEEeCCCCC
Confidence 34455455445789999998752 111111 1111122222 244 66666422 357889876422
Q ss_pred CCeEEEeecCHHHHHHhhcccCCCcEEEE---eeCCEEEEEEcCCCeEEEEECCC
Q 045071 345 TLWAEIERMPQQLYAQFAEIEAGNGFDTI---GHGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 345 ~~W~~v~~mp~~~~~~~~~~~~~~~~~~~---~~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
..-..+..- ...+.++ ..++.+++.+...+.+.+||+.+
T Consensus 312 ~~~~~~~~h-------------~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 312 LKLHSFESH-------------KDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp SCSEEEECC-------------SSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCeEEeecC-------------CCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 211111110 0122222 23555666666678899999987
No 217
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=29.60 E-value=3e+02 Score=24.51 Aligned_cols=198 Identities=9% Similarity=0.050 Sum_probs=0.0
Q ss_pred eeeecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcC--CceEEEEEccCCCCcccccccceeEE
Q 045071 163 PASSSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTP--TAVDVTVAGDDLISPYAVKNLSSESF 240 (453)
Q Consensus 163 ~~~s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~--~~ykvv~~g~~~~~~~~~~~~~~evy 240 (453)
+.++.+|.+.+..... .+.++|..+++...--...... ....+...+ ..-.++..+.++ ...+|
T Consensus 89 ~s~s~D~~i~~w~~~~---~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~s~s~dg---------~i~~w 154 (343)
T 3lrv_A 89 ISRGPCNRLLLLYPGN---QITILDSKTNKVLREIEVDSAN--EIIYMYGHNEVNTEYFIWADNRG---------TIGFQ 154 (343)
T ss_dssp EEECSTTEEEEEETTT---EEEEEETTTCCEEEEEECCCSS--CEEEEECCC---CCEEEEEETTC---------CEEEE
T ss_pred EEecCCCeEEEEEccC---ceEEeecCCcceeEEeecCCCC--CEEEEEcCCCCCCCEEEEEeCCC---------cEEEE
Q ss_pred EcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCCcEEEeecCC-ccccCCCceeeeCCeEE
Q 045071 241 HIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANAWFNIQAPM-RRFLRSPSLLDSNGKLI 319 (453)
Q Consensus 241 ds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~-~~~~~~~~lv~~~g~L~ 319 (453)
|..+ +.-............. .-...-+|.+...+.....|..||+.+.+-....... ....-..-...-+|+.+
T Consensus 155 d~~~----~~~~~~~~~~~~~~i~-~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l 229 (343)
T 3lrv_A 155 SYED----DSQYIVHSAKSDVEYS-SGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWM 229 (343)
T ss_dssp ESSS----SCEEEEECCCSSCCCC-EEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEE
T ss_pred ECCC----CcEEEEEecCCCCceE-EEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEE
Q ss_pred EEEEEeccCCCCCCcEEEEEeecCCCCeEEEee-----cCHHHHHHhhcccCCCc---EEEEeeCCEEEEEEcCCCeEEE
Q 045071 320 LVAAVEKSKLNVPKSLRLWSLQACGTLWAEIER-----MPQQLYAQFAEIEAGNG---FDTIGHGEFIVIVIRGSDKALL 391 (453)
Q Consensus 320 vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~-----mp~~~~~~~~~~~~~~~---~~~~~~g~~I~l~~~~~~~v~~ 391 (453)
+.+. .+ .++||.+.. ...-..+.. ++. . +.....|..+.......+.+.+
T Consensus 230 ~s~~-~~-------~v~iwd~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~g~~l~~~s~~d~~i~v 287 (343)
T 3lrv_A 230 VVEC-DQ-------TVVCFDLRK-DVGTLAYPTYTIPEFKT-------------GTVTYDIDDSGKNMIAYSNESNSLTI 287 (343)
T ss_dssp EEEE-SS-------BEEEEETTS-STTCBSSCCCBC------------------CCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEe-CC-------eEEEEEcCC-CCcceeecccccccccc-------------cceEEEECCCCCEEEEecCCCCcEEE
Q ss_pred EEC--CCCceEE
Q 045071 392 FDL--CMKSWQW 401 (453)
Q Consensus 392 Yd~--~~~~W~~ 401 (453)
||. ..+.|..
T Consensus 288 ~~~~~~~~~~~~ 299 (343)
T 3lrv_A 288 YKFDKKTKNWTK 299 (343)
T ss_dssp EEECTTTCSEEE
T ss_pred EEEcccccceEe
No 218
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=28.65 E-value=5.1e+02 Score=26.78 Aligned_cols=141 Identities=10% Similarity=0.133 Sum_probs=70.5
Q ss_pred eEEEcccCCCCCcccccCCCCCcccCCCCCeEEE----CCEEEEEecCCCEEEEEECCCCcEEEeecCCc---cccCCCc
Q 045071 238 ESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQV----NGKFYCMNYSPFSVLAYDISANAWFNIQAPMR---RFLRSPS 310 (453)
Q Consensus 238 evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~----~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~---~~~~~~~ 310 (453)
.+|.+..+. .+|+.+..+|... ..+.. .+.+|.... ..|+.=.=....|+.+...+| .......
T Consensus 569 ~v~~S~D~G--~tW~~~~~l~~~~-----~~i~~d~~~~~~~y~g~~--g~v~~S~DgG~tW~~~~~~lp~~~~~~~~i~ 639 (763)
T 3a0f_A 569 GPYTSSDYG--KTWTAPSGLSKQT-----TGIAADRVQANTFYVYVE--GDFFVSTDGGKSYTKKGNGLPCCWTYTGTPV 639 (763)
T ss_dssp CCEEESSTT--SCCBCCBSCCCCC-----SCEEECSSSTTCEEEEET--TEEEEESSTTSBCEEECBTSCCSSCCCEEEE
T ss_pred ceEEeCCCC--CCCeecCCCCCCc-----ceEEEeccCCCEEEEEcC--CCEEEEeCCCcCccccccCCCcccCccccEE
Confidence 456555444 7999886565310 11111 244555432 233322223467988743333 1111111
Q ss_pred eee-eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEE--c
Q 045071 311 LLD-SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVI--R 384 (453)
Q Consensus 311 lv~-~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~--~ 384 (453)
+.. .+++||++.. .. .||+.+.....|+++..++.... . ....|.... ..+.||+.. .
T Consensus 640 ~~~~~~~~l~~~~~---~~-------~l~~S~D~G~tW~~~~~~~~~~~----~--~~~~~g~~~~~~~~~~l~~~G~~~ 703 (763)
T 3a0f_A 640 TSNLRAGELWVSVK---GV-------GIYHSTDFGNTFTALAGSGSSLN----P--AVFSIGAPQTPNATETLFLWGIPS 703 (763)
T ss_dssp ECSSSTTCEEEEET---TT-------EEEEESSTTSBCEECTTBTTTBE----E--EEEEEECCSSTTSSCEEEEEEECS
T ss_pred ECCCCCCcEEEEcC---CC-------eEEEEcCCCCCceEccCCCcccc----c--ceeEEeeecCCCCCceEEEEEEcc
Confidence 111 3578887552 11 68988877789999876654110 0 000111111 134677765 1
Q ss_pred --CCCeEEEEECCCCceEEcC
Q 045071 385 --GSDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 385 --~~~~v~~Yd~~~~~W~~l~ 403 (453)
....++.-+-.-++|+.+.
T Consensus 704 ~~~~~gl~~S~D~G~tW~~~~ 724 (763)
T 3a0f_A 704 ASQPEGLYMSTDNGGLWTRLN 724 (763)
T ss_dssp TTSCSEEEEESSTTSCCEECS
T ss_pred cCCCcEEEEeCCCCCCcEecc
Confidence 2355666666668899986
No 219
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=28.46 E-value=3e+02 Score=24.13 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=54.3
Q ss_pred eeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccc---cCCC
Q 045071 181 KTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGT---TSSL 257 (453)
Q Consensus 181 ~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~---~~~~ 257 (453)
..++++||.+++...+. .. ....++..+++.-.++++....... ......+|+... +.... ....
T Consensus 169 ~~v~~~d~~~g~~~~~~--~~---~~p~gl~~spdg~~lyv~~~~~~~~---~~~~i~~~~~~~----~~l~~~~~~~~~ 236 (305)
T 3dr2_A 169 HSVYRLPPDGSPLQRMA--DL---DHPNGLAFSPDEQTLYVSQTPEQGH---GSVEITAFAWRD----GALHDRRHFASV 236 (305)
T ss_dssp EEEEEECSSSCCCEEEE--EE---SSEEEEEECTTSSEEEEEECCC------CCCEEEEEEEET----TEEEEEEEEECC
T ss_pred CeEEEEcCCCCcEEEEe--cC---CCCcceEEcCCCCEEEEEecCCcCC---CCCEEEEEEecC----CCccCCeEEEEC
Confidence 57899999888776653 11 1123566666555567664321000 012446676654 22111 1111
Q ss_pred CCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECCCCcEEEeecC
Q 045071 258 PRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDISANAWFNIQAP 301 (453)
Q Consensus 258 p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p 301 (453)
+. .. ...+.+ +|.+|+... ..|.+||++......+..|
T Consensus 237 ~~--~~--pdgi~~d~~G~lwv~~~--~gv~~~~~~g~~~~~~~~~ 276 (305)
T 3dr2_A 237 PD--GL--PDGFCVDRGGWLWSSSG--TGVCVFDSDGQLLGHIPTP 276 (305)
T ss_dssp SS--SC--CCSEEECTTSCEEECCS--SEEEEECTTSCEEEEEECS
T ss_pred CC--CC--CCeEEECCCCCEEEecC--CcEEEECCCCCEEEEEECC
Confidence 11 01 122333 578776653 5799999987777777555
No 220
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=28.27 E-value=3.3e+02 Score=24.52 Aligned_cols=26 Identities=15% Similarity=0.138 Sum_probs=18.6
Q ss_pred eeCCEEEEEEcC--CCeEEEEECCCCce
Q 045071 374 GHGEFIVIVIRG--SDKALLFDLCMKSW 399 (453)
Q Consensus 374 ~~g~~I~l~~~~--~~~v~~Yd~~~~~W 399 (453)
..|..|++.... ...++.+|+.++.|
T Consensus 360 pDg~~l~~~s~~~g~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 360 PDDKQILFTSDVHGKPALYLATLPESVW 387 (388)
T ss_dssp TTSSEEEEEECTTSSCEEEEEECCGGGG
T ss_pred CCCCEEEEEecCCCceeEEEEECChhcc
Confidence 457788876643 46788888887776
No 221
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=27.69 E-value=4.4e+02 Score=25.77 Aligned_cols=116 Identities=15% Similarity=0.027 Sum_probs=59.0
Q ss_pred cCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEE-------cCCceEEEEEccCCCCcccccccceeE
Q 045071 167 SGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKV-------TPTAVDVTVAGDDLISPYAVKNLSSES 239 (453)
Q Consensus 167 ~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~-------~~~~ykvv~~g~~~~~~~~~~~~~~ev 239 (453)
.++.|++.... ...+.+.|+.++....+-.........-.++.+ +.....+|++....... .....+.+
T Consensus 150 ~~~~Lyv~~~~--~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~--~~~~~V~~ 225 (496)
T 3kya_A 150 NKDHLYICYDG--HKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG--DESPSVYI 225 (496)
T ss_dssp EEEEEEEEEET--EEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG--GGEEEEEE
T ss_pred CCCEEEEEECC--CCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc--ccCceEEE
Confidence 35666666543 246888999998877664332211212234555 55445677775432110 01122344
Q ss_pred EEcccCCCCCcccc-c--CCCCCcccCCCCCeEEE--CCEEEEEecCCCEEEEEECC
Q 045071 240 FHIDAGGFFSLWGT-T--SSLPRLCSLESGRMVQV--NGKFYCMNYSPFSVLAYDIS 291 (453)
Q Consensus 240 yds~~~~~~~~W~~-~--~~~p~~~~~~~~~~v~~--~G~lY~~~~~~~~i~~yD~~ 291 (453)
++... + +.|.. . ..++. .......++. +|.||+.......|..||+.
T Consensus 226 i~r~~-~--G~~~~~~~~~~v~~--~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 226 IKRNA-D--GTFDDRSDIQLIAA--YKQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EECCT-T--SCCSTTSCEEEEEE--ESCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EecCC-C--Cceeecccceeecc--CCCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 44222 1 35542 0 11111 1111223333 47899988877789999997
No 222
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=27.60 E-value=2e+02 Score=27.60 Aligned_cols=56 Identities=13% Similarity=0.185 Sum_probs=42.7
Q ss_pred EEECCEEEEEecC------CCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEEE
Q 045071 269 VQVNGKFYCMNYS------PFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAAV 324 (453)
Q Consensus 269 v~~~G~lY~~~~~------~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~~ 324 (453)
-+.+|++|.++.. ...+..-+.....|+.++.|.-.+..+..++..++.|||++..
T Consensus 345 kyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 345 KYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp EEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred hhhCCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 4579999998632 2467777888899999988855555566778889999999863
No 223
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=27.37 E-value=2e+02 Score=24.92 Aligned_cols=62 Identities=15% Similarity=0.010 Sum_probs=31.3
Q ss_pred ECCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCC-ce-eeeCCeEEEEEEEeccCCCCCCcEEEEEeec
Q 045071 271 VNGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSP-SL-LDSNGKLILVAAVEKSKLNVPKSLRLWSLQA 342 (453)
Q Consensus 271 ~~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~-~l-v~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~ 342 (453)
.+|...+.+.....|..||+.+.+-........ ... .+ ..-++++++++... ..+.+|.+..
T Consensus 27 ~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d-------g~i~~~~~~~ 90 (313)
T 3odt_A 27 VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ---GFLNSVCYDSEKELLLFGGKD-------TMINGVPLFA 90 (313)
T ss_dssp EETTEEEEEETTSEEEEEEESSSEEEEEEEECS---SCEEEEEEETTTTEEEEEETT-------SCEEEEETTC
T ss_pred cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC---ccEEEEEECCCCCEEEEecCC-------CeEEEEEeee
Confidence 344333334444678899987765433211111 111 12 12356766666422 2578888764
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=27.18 E-value=1.5e+02 Score=27.00 Aligned_cols=82 Identities=12% Similarity=0.081 Sum_probs=43.5
Q ss_pred CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEc---CCCeEEE
Q 045071 315 NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIR---GSDKALL 391 (453)
Q Consensus 315 ~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~---~~~~v~~ 391 (453)
+|+||++...... ...-+|+.+|..+++-.+.-.++.... ........+.+...++.+|+... ....+.+
T Consensus 77 ~g~L~v~D~g~~~----~~~~~i~~~d~~tg~~~~~~~~~~~~~---~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v 149 (343)
T 2qe8_A 77 NGIVWMLDNGNQS----KSVPKLVAWDTLNNQLSRVIYLPPPIT---LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIR 149 (343)
T ss_dssp SSEEEEEECHHHH----TSCCEEEEEETTTTEEEEEEECCTTTS---CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEE
T ss_pred CCcEEEEcCCCCc----CCCCeEEEEECCCCeEEEEEECChhhc---ccccccceEEEecCCCEEEEEcCccCCCCeEEE
Confidence 5899987632100 001167777765555444334543110 00001122333224679999876 4678999
Q ss_pred EECCCC-ceEEcC
Q 045071 392 FDLCMK-SWQWIP 403 (453)
Q Consensus 392 Yd~~~~-~W~~l~ 403 (453)
||+.++ .|+.+.
T Consensus 150 ~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 150 VDLQTGLAARVLQ 162 (343)
T ss_dssp EETTTCCEEEECT
T ss_pred EECCCCCEEEEec
Confidence 999865 466564
No 225
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=27.17 E-value=3.8e+02 Score=24.78 Aligned_cols=49 Identities=12% Similarity=0.170 Sum_probs=27.5
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeeeCCeEEEEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDSNGKLILVAA 323 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~~g~L~vv~~ 323 (453)
+|.+...+.....|..+|+.+++-.... ..+......+..++++++.+.
T Consensus 158 dg~~lasgs~Dg~v~iWd~~~~~~~~~~---~~h~~~v~~~s~~~~~l~sgs 206 (420)
T 4gga_A 158 EGNYLAVGTSSAEVQLWDVQQQKRLRNM---TSHSARVGSLSWNSYILSSGS 206 (420)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEE---CCCSSCEEEEEEETTEEEEEE
T ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEE---eCCCCceEEEeeCCCEEEEEe
Confidence 4665555555578999999987643221 111122233456777776554
No 226
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=27.07 E-value=3.3e+02 Score=24.94 Aligned_cols=103 Identities=15% Similarity=0.187 Sum_probs=50.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+|.+.+.+.....|..||+.+.+-...-. .+.....-+. -+|+.++.+. .+ ..++||.+.. .+...
T Consensus 134 dg~~l~s~~~d~~i~iwd~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~s~s-~d------~~v~iwd~~~--~~~~~ 201 (393)
T 1erj_A 134 DGKFLATGAEDRLIRIWDIENRKIVMILQ---GHEQDIYSLDYFPSGDKLVSGS-GD------RTVRIWDLRT--GQCSL 201 (393)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEEC---CCSSCEEEEEECTTSSEEEEEE-TT------SEEEEEETTT--TEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEc---cCCCCEEEEEEcCCCCEEEEec-CC------CcEEEEECCC--CeeEE
Confidence 45444444444678899998876533211 1111111122 2566655443 22 3678997653 32222
Q ss_pred EeecCHHHHHHhhcccCCCcEEEE---eeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTI---GHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~---~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
...... .+.++ ..++.+++.....+.+.+||+.+.+.
T Consensus 202 ~~~~~~-------------~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~ 241 (393)
T 1erj_A 202 TLSIED-------------GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL 241 (393)
T ss_dssp EEECSS-------------CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE
T ss_pred EEEcCC-------------CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE
Confidence 111111 12222 21333444444467899999987653
No 227
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=26.88 E-value=2.9e+02 Score=27.57 Aligned_cols=79 Identities=16% Similarity=0.255 Sum_probs=45.9
Q ss_pred eEEEcccCCCCCcccccCCCCCcccCCCCCeEEECCEEEEEecCCCEEEEEECCCCc--EEEeecCCccccCCCceeeeC
Q 045071 238 ESFHIDAGGFFSLWGTTSSLPRLCSLESGRMVQVNGKFYCMNYSPFSVLAYDISANA--WFNIQAPMRRFLRSPSLLDSN 315 (453)
Q Consensus 238 evyds~~~~~~~~W~~~~~~p~~~~~~~~~~v~~~G~lY~~~~~~~~i~~yD~~~~~--W~~i~~p~~~~~~~~~lv~~~ 315 (453)
..+|..+|. -.|+.-...+. .....+..+|.+|+-+. ...+.+||.++++ |+. ..+.. ....+-..+.+
T Consensus 469 ~A~D~~tG~--~~W~~~~~~~~----~~g~~~tagglvf~g~~-dg~l~A~D~~tG~~lW~~-~~~~g-~~a~P~~y~~~ 539 (582)
T 1flg_A 469 RAMDPVSGK--VVWEHKEHLPL----WAGVLATAGNLVFTGTG-DGYFKAFDAKSGKELWKF-QTGSG-IVSPPITWEQD 539 (582)
T ss_dssp EEECTTTCC--EEEEEEESSCC----CSCCEEETTTEEEEECT-TSEEEEEETTTCCEEEEE-ECSSC-CCSCCEEEEET
T ss_pred EEEECCCCC--EEEEecCCCCC----cccceEeCCCEEEEECC-CCcEEEEECCCCCEEEEe-cCCCC-cccCceEEEEC
Confidence 345666644 46876433221 12334556888888544 3789999999865 754 34322 11222233579
Q ss_pred CeEEEEEEEe
Q 045071 316 GKLILVAAVE 325 (453)
Q Consensus 316 g~L~vv~~~~ 325 (453)
|++|++....
T Consensus 540 G~qYv~~~~G 549 (582)
T 1flg_A 540 GEQYLGVTVG 549 (582)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 9999976544
No 228
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=26.47 E-value=3.4e+02 Score=24.07 Aligned_cols=103 Identities=9% Similarity=0.163 Sum_probs=51.7
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAE 349 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~ 349 (453)
+|.+...+.....|..||+.+++-... .. .......-+. -+|++++.+.. + ..++||.++. .. .
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~-~~--~h~~~v~~l~~spd~~~l~s~s~-d------g~i~iwd~~~--~~--~ 240 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHT-LE--GHAMPIRSLTFSPDSQLLVTASD-D------GYIKIYDVQH--AN--L 240 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEE-EC--CCSSCCCEEEECTTSCEEEEECT-T------SCEEEEETTT--CC--E
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEE-Ec--ccCCceeEEEEcCCCCEEEEEcC-C------CeEEEEECCC--cc--e
Confidence 455444444446789999988764322 11 1111112222 35777665532 1 3579997653 22 2
Q ss_pred EeecCHHHHHHhhcccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCce
Q 045071 350 IERMPQQLYAQFAEIEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 350 v~~mp~~~~~~~~~~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
+..+.. . ...+.++. .+..+ +.....+.+.+||+.+.+-
T Consensus 241 ~~~~~~---------h-~~~v~~~~~sp~~~~l-~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 241 AGTLSG---------H-ASWVLNVAFCPDDTHF-VSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp EEEECC---------C-SSCEEEEEECTTSSEE-EEEETTSCEEEEETTTTEE
T ss_pred eEEEcC---------C-CCceEEEEECCCCCEE-EEEeCCCcEEEEeCCCCEE
Confidence 223321 0 01222222 34444 4444468899999987653
No 229
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=26.38 E-value=3.6e+02 Score=24.26 Aligned_cols=110 Identities=12% Similarity=0.003 Sum_probs=54.9
Q ss_pred EEEEecCC-----CEEEEEECCCCcEEEeecCCccccCCCc-e-eeeCCe-EEEEEEEeccCCCCCCcEEEEEeecCCCC
Q 045071 275 FYCMNYSP-----FSVLAYDISANAWFNIQAPMRRFLRSPS-L-LDSNGK-LILVAAVEKSKLNVPKSLRLWSLQACGTL 346 (453)
Q Consensus 275 lY~~~~~~-----~~i~~yD~~~~~W~~i~~p~~~~~~~~~-l-v~~~g~-L~vv~~~~~~~~~~~~~i~vw~ld~~~~~ 346 (453)
+++..... ..|..+|..+.++..+....+. .... + ..-+|+ |+.+...... ..-.||.++..+++
T Consensus 203 l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~--~~~~~~~~spdg~~l~~~~~~~~~-----~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 203 VGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEG--ESCTHEFWIPDGSAMAYVSYFKGQ-----TDRVIYKANPETLE 275 (396)
T ss_dssp EEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTT--EEEEEEEECTTSSCEEEEEEETTT-----CCEEEEEECTTTCC
T ss_pred EEEEecCCCCCCCceEEEEECCCCceeEeeccCCC--ccccceEECCCCCEEEEEecCCCC-----ccceEEEEECCCCC
Confidence 55554322 3689999988777655321111 0111 1 122565 4444332211 12236666665666
Q ss_pred eEEEeecCHHHHHHhhcccCCCcEEEEe-eCCEEEEEEc---------------CCCeEEEEECCCCceEEcC
Q 045071 347 WAEIERMPQQLYAQFAEIEAGNGFDTIG-HGEFIVIVIR---------------GSDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 347 W~~v~~mp~~~~~~~~~~~~~~~~~~~~-~g~~I~l~~~---------------~~~~v~~Yd~~~~~W~~l~ 403 (453)
.+.+..++.. ...... .|..+++... ....+.++|+.+++.+.+.
T Consensus 276 ~~~l~~~~~~------------~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 276 NEEVMVMPPC------------SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EEEEEECCSE------------EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred eEEeeeCCCC------------CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 6666555420 112223 4454444321 2367999999888766553
No 230
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=26.03 E-value=3.3e+02 Score=23.78 Aligned_cols=49 Identities=8% Similarity=0.239 Sum_probs=28.0
Q ss_pred eEEECCEEEEEecCCCEEEEEECC-CCcEEEeecCCccccCCCceeeeCCeEEE
Q 045071 268 MVQVNGKFYCMNYSPFSVLAYDIS-ANAWFNIQAPMRRFLRSPSLLDSNGKLIL 320 (453)
Q Consensus 268 ~v~~~G~lY~~~~~~~~i~~yD~~-~~~W~~i~~p~~~~~~~~~lv~~~g~L~v 320 (453)
.++.+|.+|+.+.. ..|.+||.. +..|... .+.. .....++..+|.|++
T Consensus 103 ~~~~~~~l~v~t~~-~~l~~~d~~g~~~~~~~-~~~~--~~~~~~~~~~g~l~v 152 (330)
T 3hxj_A 103 FTIFEDILYVTSMD-GHLYAINTDGTEKWRFK-TKKA--IYATPIVSEDGTIYV 152 (330)
T ss_dssp EEEETTEEEEECTT-SEEEEECTTSCEEEEEE-CSSC--CCSCCEECTTSCEEE
T ss_pred ceEECCEEEEEecC-CEEEEEcCCCCEEEEEc-CCCc--eeeeeEEcCCCEEEE
Confidence 44558998876644 689999998 3346432 2211 111122333778776
No 231
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=26.01 E-value=3.4e+02 Score=23.90 Aligned_cols=52 Identities=8% Similarity=0.241 Sum_probs=29.1
Q ss_pred cEEEEEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEe---eC---CEEEEEEcCCCeEEEEECCC
Q 045071 334 SLRLWSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIG---HG---EFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 334 ~i~vw~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~---~g---~~I~l~~~~~~~v~~Yd~~~ 396 (453)
.++||.++. ...|+.+..+... ...+.++. .+ +..++.....+.+.+||+.+
T Consensus 190 ~v~lWd~~~-~~~~~~~~~l~~h----------~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 190 LIKLWKEEE-DGQWKEEQKLEAH----------SDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp BCCEEEECT-TSCEEEEECCBCC----------SSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred eEEEEEeCC-CCccceeeecccC----------CCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 579998853 4568776655320 01233332 12 23444444578899999876
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=25.57 E-value=3.3e+02 Score=24.48 Aligned_cols=51 Identities=16% Similarity=0.084 Sum_probs=29.8
Q ss_pred CCEEEEEecC-----CCEEEEEECCCCc-EEEeecCCccc--cCC-Cceeee--CCeEEEEE
Q 045071 272 NGKFYCMNYS-----PFSVLAYDISANA-WFNIQAPMRRF--LRS-PSLLDS--NGKLILVA 322 (453)
Q Consensus 272 ~G~lY~~~~~-----~~~i~~yD~~~~~-W~~i~~p~~~~--~~~-~~lv~~--~g~L~vv~ 322 (453)
+|.||++... ...|+.||+.+++ -..+..|.... ... ..++.. +|.+|+..
T Consensus 77 ~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd 138 (343)
T 2qe8_A 77 NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISD 138 (343)
T ss_dssp SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEE
T ss_pred CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEc
Confidence 4899998743 3689999999887 44444432111 111 133333 47787754
No 233
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=25.24 E-value=3.3e+02 Score=23.46 Aligned_cols=65 Identities=15% Similarity=0.163 Sum_probs=33.9
Q ss_pred ecCceEEEEecCCCCeeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEccc
Q 045071 166 SSGGLVCWVSDHAGAKTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDA 244 (453)
Q Consensus 166 s~~Gll~~~~~~~~~~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~ 244 (453)
|.+++|-+..+ +.+.|||..|++...+-..... .....++...+.+-.++..+.+ -.+.+|+..+
T Consensus 34 S~~~~lAvg~D----~tV~iWd~~tg~~~~~~~~~~~-~~~V~~v~~~~~~~~l~sgs~D---------g~v~iw~~~~ 98 (318)
T 4ggc_A 34 SSGNVLAVALD----NSVYLWSASSGDILQLLQMEQP-GEYISSVAWIKEGNYLAVGTSS---------AEVQLWDVQQ 98 (318)
T ss_dssp CTTSEEEEEET----TEEEEEETTTCCEEEEEECCST-TCCEEEEEECTTSSEEEEEETT---------SEEEEEETTT
T ss_pred CCCCEEEEEeC----CEEEEEECCCCCEEEEEEecCC-CCeEEEEEECCCCCEEEEEECC---------CcEEEeecCC
Confidence 55676554332 3789999999876543222211 1123345555544334333322 2457777766
No 234
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=24.78 E-value=4e+02 Score=24.24 Aligned_cols=100 Identities=13% Similarity=0.159 Sum_probs=47.9
Q ss_pred CCEEEEEECCCCcEEEee-cCCcccc-CCCceee---eCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEeecCHH
Q 045071 282 PFSVLAYDISANAWFNIQ-APMRRFL-RSPSLLD---SNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIERMPQQ 356 (453)
Q Consensus 282 ~~~i~~yD~~~~~W~~i~-~p~~~~~-~~~~lv~---~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~~mp~~ 356 (453)
...|..||+.+++-.... ...+... ....-+. .++.+++.+... ..++||.+......-..+..-.
T Consensus 179 D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-------~~v~~wd~~~~~~~~~~~~~h~-- 249 (380)
T 3iz6_a 179 DQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-------TTVRLWDLRITSRAVRTYHGHE-- 249 (380)
T ss_dssp TSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-------SCEEEEETTTTCCCCEEECCCS--
T ss_pred CCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-------CeEEEEECCCCCcceEEECCcC--
Confidence 367899999987654331 1221111 1111122 256777665422 3679998763222221111100
Q ss_pred HHHHhhcccCCCcEEEEeeCCEEEEEEcCCCeEEEEECCCCce
Q 045071 357 LYAQFAEIEAGNGFDTIGHGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
.....+.....+.. ++.....+.+.+||+.+.+-
T Consensus 250 --------~~v~~v~~~p~~~~-l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 250 --------GDINSVKFFPDGQR-FGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp --------SCCCEEEECTTSSE-EEEECSSSCEEEEETTTTEE
T ss_pred --------CCeEEEEEecCCCe-EEEEcCCCeEEEEECCCCcE
Confidence 00111222223443 34444568899999987653
No 235
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=24.78 E-value=2.6e+02 Score=24.74 Aligned_cols=111 Identities=14% Similarity=0.186 Sum_probs=52.4
Q ss_pred CEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCceeee----CCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeE
Q 045071 273 GKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLLDS----NGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWA 348 (453)
Q Consensus 273 G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv~~----~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~ 348 (453)
|.....+.....|..||+.++....+.. +..+.....-++. +|++++.+.. + ..++||.++ +..|.
T Consensus 25 g~~lasgs~D~~v~lwd~~~~~~~~~~~-l~gH~~~V~~v~~~~~~~~~~l~s~s~-D------~~v~iWd~~--~~~~~ 94 (316)
T 3bg1_A 25 GTRLATCSSDRSVKIFDVRNGGQILIAD-LRGHEGPVWQVAWAHPMYGNILASCSY-D------RKVIIWREE--NGTWE 94 (316)
T ss_dssp GCEEEEEETTTEEEEEEEETTEEEEEEE-EECCSSCEEEEEECCGGGSSCEEEEET-T------SCEEEECCS--SSCCC
T ss_pred CCEEEEEeCCCeEEEEEecCCCcEEEEE-EcCCCccEEEEEeCCCCCCCEEEEEEC-C------CEEEEEECC--CCcce
Confidence 4433334444678888887765422211 1111111222332 2666655542 2 367999765 45666
Q ss_pred EEeecCHHHHHHhhcccCCCcEEEEeeC-CEEEEEEcCCCeEEEEECCCC-ceE
Q 045071 349 EIERMPQQLYAQFAEIEAGNGFDTIGHG-EFIVIVIRGSDKALLFDLCMK-SWQ 400 (453)
Q Consensus 349 ~v~~mp~~~~~~~~~~~~~~~~~~~~~g-~~I~l~~~~~~~v~~Yd~~~~-~W~ 400 (453)
.+..+... ......+.....+ +.+++.....+.+.+||+.+. .|.
T Consensus 95 ~~~~~~~h-------~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~ 141 (316)
T 3bg1_A 95 KSHEHAGH-------DSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE 141 (316)
T ss_dssp EEEEECCC-------SSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE
T ss_pred EEEEccCC-------CCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc
Confidence 55444320 0000111111121 334444445678889998765 464
No 236
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=23.72 E-value=4e+02 Score=25.81 Aligned_cols=101 Identities=7% Similarity=0.099 Sum_probs=49.4
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCcc-ccCCCceeee------------CCeEEEEEEEeccCCCCCCcEEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRR-FLRSPSLLDS------------NGKLILVAAVEKSKLNVPKSLRLW 338 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~-~~~~~~lv~~------------~g~L~vv~~~~~~~~~~~~~i~vw 338 (453)
+|.+.+.+.....|..||+.+.+-... ... +.....-+.. +|++++++... ..+.||
T Consensus 499 ~g~~l~~~~~dg~i~iw~~~~~~~~~~---~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-------g~i~iw 568 (615)
T 1pgu_A 499 SETYIAAGDVMGKILLYDLQSREVKTS---RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-------TNIFIY 568 (615)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEC---CSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-------SCEEEE
T ss_pred CCCEEEEcCCCCeEEEeeCCCCcceeE---eecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-------CcEEEE
Confidence 444444443345788888887654322 111 1111112222 67777766422 267999
Q ss_pred EeecCCCCeEEEeecCHHHHHHhhcccCCCcEEE--EeeCCEEEEEEcCCCeEEEEECCC
Q 045071 339 SLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDT--IGHGEFIVIVIRGSDKALLFDLCM 396 (453)
Q Consensus 339 ~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~--~~~g~~I~l~~~~~~~v~~Yd~~~ 396 (453)
.++.... .+..+... ...+.+ +..++. ++.....+.+.+||+++
T Consensus 569 ~~~~~~~---~~~~~~~h----------~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 569 SVKRPMK---IIKALNAH----------KDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ESSCTTC---CEEETTSS----------TTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred ECCCCce---echhhhcC----------ccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 8875322 22233210 012222 223445 55555578899999875
No 237
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=23.32 E-value=4.7e+02 Score=24.56 Aligned_cols=118 Identities=11% Similarity=0.000 Sum_probs=60.1
Q ss_pred CCEEEEEecC----CCEEEEEECCCCcEE-EeecCCccccCCCceee-eC-CeEEEEEEEeccCCCCCCcEEEEEeecCC
Q 045071 272 NGKFYCMNYS----PFSVLAYDISANAWF-NIQAPMRRFLRSPSLLD-SN-GKLILVAAVEKSKLNVPKSLRLWSLQACG 344 (453)
Q Consensus 272 ~G~lY~~~~~----~~~i~~yD~~~~~W~-~i~~p~~~~~~~~~lv~-~~-g~L~vv~~~~~~~~~~~~~i~vw~ld~~~ 344 (453)
+..+|+.... .+.|.++|..+.+-. .++.. ..+.++. -+ ..||+..............=.|..+|..+
T Consensus 44 ~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG-----~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 44 ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG-----FLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC-----SSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC-----CCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 4678888653 468999999987643 33321 1123432 24 45776553211000000011355556544
Q ss_pred CCeEEEeec--CH-HHHHHhhcccCCCcEEEEeeCCEEEEEEcC-CCeEEEEECCCCce
Q 045071 345 TLWAEIERM--PQ-QLYAQFAEIEAGNGFDTIGHGEFIVIVIRG-SDKALLFDLCMKSW 399 (453)
Q Consensus 345 ~~W~~v~~m--p~-~~~~~~~~~~~~~~~~~~~~g~~I~l~~~~-~~~v~~Yd~~~~~W 399 (453)
.+= +.++ +. .. .........+.....|.++|+.+.. .+.+.+.|..+++-
T Consensus 119 ~~v--~~~I~v~~g~r---~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v 172 (386)
T 3sjl_D 119 LLP--TADIELPDAPR---FLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF 172 (386)
T ss_dssp CCE--EEEEEETTCCC---CCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred CeE--EEEEECCCccc---cccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE
Confidence 433 3333 21 00 0000001234555678889998754 57889999998764
No 238
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=22.92 E-value=4.2e+02 Score=23.88 Aligned_cols=29 Identities=3% Similarity=-0.070 Sum_probs=21.0
Q ss_pred eeCCEEEEEEcCCCeEEEEECC-CCceEEc
Q 045071 374 GHGEFIVIVIRGSDKALLFDLC-MKSWQWI 402 (453)
Q Consensus 374 ~~g~~I~l~~~~~~~v~~Yd~~-~~~W~~l 402 (453)
..|..+|+.....+.+.+||++ +++...+
T Consensus 154 pdG~~l~~~~~~~~~v~~~~~~~~g~~~~~ 183 (365)
T 1jof_A 154 PTETYLYSADLTANKLWTHRKLASGEVELV 183 (365)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCCCEEEEEcCCCCEEEEEEECCCCCEEEe
Confidence 3567888876556789999998 6665443
No 239
>1cn3_F Fragment of coat protein VP2; viral coat protein VP1, viral coat protein VP2, viral entry, viral protein; 2.20A {Polyomavirus}
Probab=22.49 E-value=43 Score=17.77 Aligned_cols=9 Identities=33% Similarity=0.663 Sum_probs=3.8
Q ss_pred hHHHHHHHH
Q 045071 55 PQRLLDRVL 63 (453)
Q Consensus 55 P~dll~~IL 63 (453)
||=+|..||
T Consensus 17 pdwmlplil 25 (29)
T 1cn3_F 17 PDWMLPLIL 25 (29)
T ss_dssp EGGGHHHHH
T ss_pred chhhHHHHH
Confidence 333444444
No 240
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=22.22 E-value=6.4e+02 Score=25.77 Aligned_cols=182 Identities=10% Similarity=0.016 Sum_probs=94.5
Q ss_pred eeEEEEcCcccceecCCCCCCCCCcceEEEEEcCCceEEEEEccCCCCcccccccceeEEEcccCCCCCcccccCCCCCc
Q 045071 181 KTLILCNPVTGSLSQLPPTLRPRLFPSIGLKVTPTAVDVTVAGDDLISPYAVKNLSSESFHIDAGGFFSLWGTTSSLPRL 260 (453)
Q Consensus 181 ~~~~v~NP~T~~w~~LP~~~~~r~~~~~~~~~~~~~ykvv~~g~~~~~~~~~~~~~~evyds~~~~~~~~W~~~~~~p~~ 260 (453)
..++++|+.+++++.++.... ......++..+... ++.+ +.. .....|+..+ +.|+........
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~-~~~~v~~i~~d~~g-~lwi-gt~---------~Gl~~~~~~~----~~~~~~~~~~~~ 490 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKN-ELLDVRVFYEDKNK-KIWI-GTH---------AGVFVIDLAS----KKVIHHYDTSNS 490 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTT-CCCCEEEEEECTTS-EEEE-EET---------TEEEEEESSS----SSCCEEECTTTS
T ss_pred CCEEEEcCCCCcEEEeccCCC-CCCeEEEEEECCCC-CEEE-EEC---------CceEEEeCCC----CeEEecccCccc
Confidence 368889999988877754211 11122344444332 3333 221 1236777777 677654322100
Q ss_pred ccCCC-CCeEEE--CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCC---Cceee-eCCeEEEEEEEeccCCCCCC
Q 045071 261 CSLES-GRMVQV--NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRS---PSLLD-SNGKLILVAAVEKSKLNVPK 333 (453)
Q Consensus 261 ~~~~~-~~~v~~--~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~---~~lv~-~~g~L~vv~~~~~~~~~~~~ 333 (453)
..... -..+.. +|.+++-+.. ..|..||+.++++..+..+. .... ..+.+ .+|+|++... .
T Consensus 491 ~~~~~~i~~i~~d~~g~lWigt~~-~Gl~~~~~~~~~~~~~~~~~--~l~~~~i~~i~~d~~g~lWi~T~--~------- 558 (781)
T 3v9f_A 491 QLLENFVRSIAQDSEGRFWIGTFG-GGVGIYTPDMQLVRKFNQYE--GFCSNTINQIYRSSKGQMWLATG--E------- 558 (781)
T ss_dssp SCSCSCEEEEEECTTCCEEEEESS-SCEEEECTTCCEEEEECTTT--TCSCSCEEEEEECTTSCEEEEET--T-------
T ss_pred ccccceeEEEEEcCCCCEEEEEcC-CCEEEEeCCCCeEEEccCCC--CCCCCeeEEEEECCCCCEEEEEC--C-------
Confidence 00000 012222 4676655543 57999999999988764321 1111 12333 4688876331 1
Q ss_pred cEEE-EEeecCCCCeEEEeecCHHHHHHhhcccCCCcEEE-EeeCCEEEEEEcCCCeEEEEECCCCceEEc
Q 045071 334 SLRL-WSLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDT-IGHGEFIVIVIRGSDKALLFDLCMKSWQWI 402 (453)
Q Consensus 334 ~i~v-w~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~-~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~l 402 (453)
.+ +.++..+++++....- . ++... ..... ...++.|++.. ...+..||+++++++..
T Consensus 559 --Glv~~~d~~~~~~~~~~~~-~----gl~~~---~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~~~~~~~ 617 (781)
T 3v9f_A 559 --GLVCFPSARNFDYQVFQRK-E----GLPNT---HIRAISEDKNGNIWAST--NTGISCYITSKKCFYTY 617 (781)
T ss_dssp --EEEEESCTTTCCCEEECGG-G----TCSCC---CCCEEEECSSSCEEEEC--SSCEEEEETTTTEEEEE
T ss_pred --CceEEECCCCCcEEEcccc-C----CCCCc---eEEEEEECCCCCEEEEc--CCceEEEECCCCceEEe
Confidence 45 7788777777655321 1 11111 11122 22356788764 36689999998877664
No 241
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=22.19 E-value=3.3e+02 Score=28.13 Aligned_cols=63 Identities=11% Similarity=0.217 Sum_probs=34.5
Q ss_pred CCEEEEEecC----CCEEEEEECCC-CcEEE-eecCCccccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeec
Q 045071 272 NGKFYCMNYS----PFSVLAYDISA-NAWFN-IQAPMRRFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQA 342 (453)
Q Consensus 272 ~G~lY~~~~~----~~~i~~yD~~~-~~W~~-i~~p~~~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~ 342 (453)
++.||+++.. ...|+.+|..+ ++|+. +-.+... ..-..+...++.|++...... ..+||.++.
T Consensus 330 g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~-~~l~~~~~~~~~lv~~~~~~g-------~~~l~~~dl 398 (751)
T 2xe4_A 330 TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSED-VFMESIAVRSNYLVVAGRRAG-------LTRIWTMMA 398 (751)
T ss_dssp TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSS-EEEEEEEECSSEEEEEEEETT-------EEEEEEEEC
T ss_pred CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCC-cEEEEEEEECCEEEEEEEeCC-------EEEEEEEec
Confidence 6788988653 25899999987 68876 4222111 000112224566665544321 336677663
No 242
>3sil_A Sialidase; glycosidase, hydrolase; HET: PO4 GOL; 1.05A {Salmonella typhimurium} SCOP: b.68.1.1 PDB: 1dim_A* 1dil_A* 2sil_A 2sim_A*
Probab=21.39 E-value=1.1e+02 Score=28.92 Aligned_cols=60 Identities=15% Similarity=0.257 Sum_probs=37.7
Q ss_pred EEEEEECCCCcEEEeecCCc-cccCCCceeeeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEEe
Q 045071 284 SVLAYDISANAWFNIQAPMR-RFLRSPSLLDSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEIE 351 (453)
Q Consensus 284 ~i~~yD~~~~~W~~i~~p~~-~~~~~~~lv~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v~ 351 (453)
.++.|.-+...|+.-. .++ .....+.+++.+|+|+|+... .. ...+++=.+....|++..
T Consensus 204 s~~iyS~DG~tW~~~~-~~~~~~~~ep~vvE~dG~L~m~~R~-~g------~r~v~~S~D~G~tWt~~~ 264 (379)
T 3sil_A 204 TSFIYSTDGITWSLPS-GYCEGFGSENNIIEFNASLVNNIRN-SG------LRRSFETKDFGKTWTEFP 264 (379)
T ss_dssp EEEEEESSSSSEECCS-CCEECTTCCEEEEEETTEEEEEECC-SS------BCBCEEESSSSSCCEECT
T ss_pred EEEEEcCCCCCeEECC-CCCCccCCCCEEEEECCEEEEEEEe-CC------CEEEEEEcCCCccCCCCc
Confidence 4455644477897543 332 233456889999999998875 21 124565555578999853
No 243
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=21.11 E-value=4.5e+02 Score=23.56 Aligned_cols=117 Identities=13% Similarity=0.116 Sum_probs=53.0
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEe-ecCCccc---cCCCceee--eCCeEEEEEEEeccCCCCCCcEEEEEeecCCC
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNI-QAPMRRF---LRSPSLLD--SNGKLILVAAVEKSKLNVPKSLRLWSLQACGT 345 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i-~~p~~~~---~~~~~lv~--~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~ 345 (453)
+| +.+.+.....|..||+.+.+.... ... ... .....-+. -+|++++++..... ...+.+|.+.. .
T Consensus 197 ~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~----~g~i~i~d~~~--~ 268 (397)
T 1sq9_A 197 RG-LIATGFNNGTVQISELSTLRPLYNFESQ-HSMINNSNSIRSVKFSPQGSLLAIAHDSNS----FGCITLYETEF--G 268 (397)
T ss_dssp TS-EEEEECTTSEEEEEETTTTEEEEEEECC-C---CCCCCEEEEEECSSTTEEEEEEEETT----EEEEEEEETTT--C
T ss_pred Cc-eEEEEeCCCcEEEEECCCCceeEEEecc-ccccccCCccceEEECCCCCEEEEEecCCC----CceEEEEECCC--C
Confidence 45 444444457899999998754332 210 001 11111222 25777776664310 02568887653 2
Q ss_pred CeEEEeecCHHH--HHHhhc-ccCCCcEEEEe---eCCEEEEEEcCCCeEEEEECCCCce
Q 045071 346 LWAEIERMPQQL--YAQFAE-IEAGNGFDTIG---HGEFIVIVIRGSDKALLFDLCMKSW 399 (453)
Q Consensus 346 ~W~~v~~mp~~~--~~~~~~-~~~~~~~~~~~---~g~~I~l~~~~~~~v~~Yd~~~~~W 399 (453)
+.+..+.... ...... ......+.++. .++.|+. ....+.+.+||+.+.+-
T Consensus 269 --~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~dg~i~iwd~~~~~~ 325 (397)
T 1sq9_A 269 --ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCS-AGWDGKLRFWDVKTKER 325 (397)
T ss_dssp --CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEE-EETTSEEEEEETTTTEE
T ss_pred --cccceeccCcccccccccccccCCcEEEEEECCCCCEEEE-EeCCCeEEEEEcCCCce
Confidence 2222222100 000000 00011222222 3455444 44478899999988653
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=20.31 E-value=3.4e+02 Score=25.24 Aligned_cols=114 Identities=11% Similarity=0.016 Sum_probs=56.6
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEee-cCCcc------cc--CCCc-e-ee-eCCeEEEEEEEe-ccCCCCCCcEEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQ-APMRR------FL--RSPS-L-LD-SNGKLILVAAVE-KSKLNVPKSLRLW 338 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~-~p~~~------~~--~~~~-l-v~-~~g~L~vv~~~~-~~~~~~~~~i~vw 338 (453)
++.+|+... ..+.+.|..+..-..+. .+... .. .... + +. -+++||+...-. ...+.. .-.+.
T Consensus 222 ~~~~~~vs~--~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~--~~~~~ 297 (368)
T 1mda_H 222 PGMLVWAVA--SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAA--AENTS 297 (368)
T ss_dssp TTEEEECBS--SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSC--EEEEE
T ss_pred CCEEEEEcC--CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccccc--CCCEE
Confidence 466777766 68999999764322221 11110 00 0111 2 22 346677644311 100000 00233
Q ss_pred EeecCCCCeEEEeecCHHHHHHhhcccCCCcEEEEeeCCEEEEEEc-CCCeEEEEECCCCce
Q 045071 339 SLQACGTLWAEIERMPQQLYAQFAEIEAGNGFDTIGHGEFIVIVIR-GSDKALLFDLCMKSW 399 (453)
Q Consensus 339 ~ld~~~~~W~~v~~mp~~~~~~~~~~~~~~~~~~~~~g~~I~l~~~-~~~~v~~Yd~~~~~W 399 (453)
.+|. ...+.+.+++..- ...++.....|..+|+... ..+.+.++|+.+.+-
T Consensus 298 ViD~--~t~~vv~~i~vg~--------~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kv 349 (368)
T 1mda_H 298 SVTA--SVGQTSGPISNGH--------DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQD 349 (368)
T ss_dssp EEES--SSCCEEECCEEEE--------EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEE
T ss_pred EEEC--CCCeEEEEEECCC--------CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcE
Confidence 5564 3345566665310 0123344445667888877 589999999987653
No 245
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=20.13 E-value=7.1e+02 Score=25.48 Aligned_cols=109 Identities=7% Similarity=0.046 Sum_probs=61.6
Q ss_pred CCEEEEEecCCCEEEEEECCCCcEEEeecCCccccCCCcee-eeCCeEEEEEEEeccCCCCCCcEEEEEeecCCCCeEEE
Q 045071 272 NGKFYCMNYSPFSVLAYDISANAWFNIQAPMRRFLRSPSLL-DSNGKLILVAAVEKSKLNVPKSLRLWSLQACGTLWAEI 350 (453)
Q Consensus 272 ~G~lY~~~~~~~~i~~yD~~~~~W~~i~~p~~~~~~~~~lv-~~~g~L~vv~~~~~~~~~~~~~i~vw~ld~~~~~W~~v 350 (453)
+|.+++.+. ..|..||..++++..+....+....-..+. ..+|+|++ +. ... .|+.++..+++++.+
T Consensus 141 ~g~lwi~t~--~gl~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt-~~~--------Gl~~~~~~~~~~~~~ 208 (795)
T 4a2l_A 141 PEQLLISTP--EGLIMFDIKESKFIDDSFSTAMHKTIASTLYRQGDQIYI-GT-STD--------GLYTYSITQKTFEKV 208 (795)
T ss_dssp TTEEEEEET--TEEEEEETTTTEEECSSSCHHHHTCCEEEEEEETTEEEE-EE-SSS--------CEEEEETTTCCEEEC
T ss_pred CCCEEEEEC--CceEEEECCCCEEEeccCCCCCCcceEEEEECCCCCEEE-EE-CCC--------CEEEEeCCCCeEEEe
Confidence 678777654 589999999988865432211110011233 35788886 32 111 467777767777654
Q ss_pred eecCHHHHHHhhcccCCCcEE-EEeeCCEEEEEEcCCCeEEEEECCCCceEEcC
Q 045071 351 ERMPQQLYAQFAEIEAGNGFD-TIGHGEFIVIVIRGSDKALLFDLCMKSWQWIP 403 (453)
Q Consensus 351 ~~mp~~~~~~~~~~~~~~~~~-~~~~g~~I~l~~~~~~~v~~Yd~~~~~W~~l~ 403 (453)
...+. ...... +...++.|++... ...+..||..+++++...
T Consensus 209 ~~~~~----------~~~i~~i~~d~~g~lwigt~-~~Gl~~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 209 IPILG----------TKQIQAILQQSPTRIWVATE-GAGLFLINPKTKEIKNYL 251 (795)
T ss_dssp C--------------CCCEEEEEEEETTEEEEEEB-SSCEEEEETTTTEEEEEC
T ss_pred cCCCC----------CCeeEEEEEcCCCCEEEEEC-CCCeEEEeCCCCeEEEee
Confidence 22111 001111 2234677888643 346999999998887653
Done!